Your job contains 1 sequence.
>001480
MTELLVSHHGQKQTLQSPARKSSLGGVQKDLCLAVREGSLADVESALALLKKNGGNINSR
NIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQS
GASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPC
KVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRV
TSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKI
IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA
KYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW
ASSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGI
KKATSVSVGETHLLIVGSLYHPIYPPNVAKNPQKLKLNGRNDLEEFYEDFMFNDESNNMP
SAIDKDDSGVRLAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRN
LDYILTVSSHSFASASLDILADLEKSLDLRSSESWSYRRLPTPTATFPVIINSEEEDSEN
EVLRTRDNHTKKSTLKNEGDNRLDSFFEPKADANQEISKQVRALRKKLQQIEMLEVKLSN
GHILDEQQIAKLQTKSVLERSLAELGVPIELPQAIAASAASPDGRGNKKAGVSKKQKKKS
KQKAAQVEAVSDFSVSEVGSNAAKDFFDTEITEVSKKKEEDAMSEGNVAIEYSKQSGFLV
QKKDNADSLKNNCSPQTTSKKKNKNKKGGLSMFLSGALDDTPKEIALPPPPTPRSEGPAW
GGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGKVLLSSFMTSKPIPVV
SARAQQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQQGKQHCLSHSPKTRTAGFSIAPS
QGSPSDSPGMNRWFKPEAETPSSIRSIQMEEKAMKDLKRFYSSVKIVRNQS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001480
(1071 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NXV1 - symbol:IBTK "Uncharacterized protein" ... 443 2.2e-39 4
UNIPROTKB|F1MMV0 - symbol:IBTK "Uncharacterized protein" ... 441 1.2e-38 4
UNIPROTKB|F1RQL8 - symbol:IBTK "Uncharacterized protein" ... 441 2.3e-38 3
UNIPROTKB|E9PDR5 - symbol:IBTK "Inhibitor of Bruton tyros... 434 1.9e-37 3
MGI|MGI:1918677 - symbol:Ibtk "inhibitor of Bruton agamma... 433 3.0e-37 4
UNIPROTKB|E7EPI0 - symbol:IBTK "Inhibitor of Bruton tyros... 434 4.3e-37 3
UNIPROTKB|Q9P2D0 - symbol:IBTK "Inhibitor of Bruton tyros... 434 4.6e-37 3
RGD|1311697 - symbol:Ibtk "inhibitor of Bruton agammaglob... 366 8.2e-35 3
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 355 2.9e-31 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 327 3.5e-29 2
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 323 8.2e-29 2
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 329 1.5e-26 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 316 2.8e-26 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 303 1.1e-25 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 319 1.2e-24 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 299 1.9e-24 2
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 314 4.6e-24 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 310 5.8e-24 2
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 297 9.6e-24 2
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 310 1.2e-23 1
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 297 1.4e-23 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 308 4.6e-23 2
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 292 4.6e-23 2
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 292 4.6e-23 2
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 291 6.9e-23 2
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 289 8.0e-23 2
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 303 8.4e-23 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 291 9.7e-23 2
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 339 1.0e-22 3
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 339 1.0e-22 3
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 340 1.6e-22 3
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 298 2.4e-22 1
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 339 2.6e-22 3
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 339 2.7e-22 3
DICTYBASE|DDB_G0282633 - symbol:DDB_G0282633 "putative gu... 265 3.1e-22 3
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 296 3.9e-22 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 295 4.3e-22 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 294 6.0e-22 1
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 341 6.9e-22 3
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 278 8.0e-22 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 336 8.4e-22 3
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 336 8.9e-22 3
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 278 9.5e-22 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 265 9.8e-22 2
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 305 1.1e-21 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 305 1.1e-21 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 289 1.4e-21 2
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 332 1.5e-21 3
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 332 1.5e-21 3
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 306 1.5e-21 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 346 1.9e-21 4
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 289 2.1e-21 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 305 4.8e-21 2
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 282 1.2e-20 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 281 1.6e-20 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 281 1.6e-20 1
UNIPROTKB|G4NC24 - symbol:MGG_00456 "BTB domain and ankyr... 221 2.6e-20 5
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 279 2.7e-20 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 279 2.7e-20 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 278 2.7e-20 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 279 2.7e-20 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 288 3.4e-20 2
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 275 7.1e-20 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 275 7.2e-20 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 274 9.1e-20 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 271 9.9e-20 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 279 2.2e-19 2
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 266 6.6e-19 1
ASPGD|ASPL0000042168 - symbol:AN2073 species:162425 "Emer... 219 7.6e-19 4
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 264 1.0e-18 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 263 1.4e-18 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 263 1.4e-18 1
UNIPROTKB|P23800 - symbol:RCC1 "Regulator of chromosome c... 200 1.5e-18 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 261 2.1e-18 1
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 250 2.7e-18 2
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 243 3.6e-18 3
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 272 3.7e-18 2
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 201 3.9e-18 2
MGI|MGI:1913989 - symbol:Rcc1 "regulator of chromosome co... 200 5.0e-18 2
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 252 1.1e-17 1
UNIPROTKB|P18754 - symbol:RCC1 "Regulator of chromosome c... 198 1.1e-17 2
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 265 2.8e-17 2
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 236 2.9e-17 1
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 258 3.9e-17 2
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 241 6.2e-17 1
UNIPROTKB|A7Z018 - symbol:RCC1 "Uncharacterized protein" ... 188 1.2e-16 2
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 243 1.9e-16 1
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 243 1.9e-16 1
UNIPROTKB|Q74DR4 - symbol:GSU1251 "ATS1 domain repeat pro... 258 1.9e-16 3
TIGR_CMR|GSU_1251 - symbol:GSU_1251 "BNR repeat domain pr... 258 1.9e-16 3
POMBASE|SPCC330.11 - symbol:btb1 "BTB/POZ domain protein ... 190 3.6e-16 5
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 191 5.8e-16 2
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 243 1.0e-15 2
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 247 1.0e-15 2
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 225 1.1e-15 1
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 233 1.2e-15 1
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 229 1.5e-15 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 233 2.2e-15 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 245 2.2e-15 2
DICTYBASE|DDB_G0280093 - symbol:gacGG "RhoGAP domain-cont... 244 2.3e-15 4
WARNING: Descriptions of 420 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 443 (161.0 bits), Expect = 2.2e-39, Sum P(4) = 2.2e-39
Identities = 153/489 (31%), Positives = 236/489 (48%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAA-GA 88
D+ V GS +++ L+ N I ++ FG LH A + ++ L G
Sbjct: 22 DVISVVTRGSEGQIKAFLSSYCYNAATI--KDAFGRNVLHLASSCGKKGVLDWLAETKGV 79
Query: 89 DPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL-LSGPVLQVVG 147
D A+D ESGW++LHR++ +G++ LL+ G S+ ++D + + +DL + + VV
Sbjct: 80 DLLAKDKESGWTALHRSIFYGYIDCVLSLLKHGVSLYIQDKEGLSALDLVMKDRPIHVVF 139
Query: 148 SGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSL--HGFVIKLISAAKFHSVAVTS 205
+ TEV++WG+ N+ LG G + P VD + IK + KFHSV ++
Sbjct: 140 K--KTDLTEVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSH 197
Query: 206 LGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEG 265
G++YT G+G+GGRLGH D + + PR V GL S + IAAAK HTV+ TE
Sbjct: 198 KGQIYTCGHGQGGRLGHGD------EQTCLVPRLV-EGLSSHQCSQIAAAKDHTVVLTED 250
Query: 266 GEVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFT 321
G V+T+G N QLG PR+V + LK +I VAA HT + ++ V+T
Sbjct: 251 GCVYTFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEA-VYT 309
Query: 322 WGCNREGQLGYGTS-NSASNYT-PRVVESLKGKDL-VG-VAAAKYHTIVLGADGERVIVA 377
G N GQLGY N T PR V +L KD+ V V+A+ T+ + G+ ++A
Sbjct: 310 MGLNG-GQLGYLLDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCVTERGDIYLLA 368
Query: 378 R-NLKKSGSTPLKFHRKI--------KL---HVVSIAAGMVHSTALTEDGALFYWASSDP 425
KK S L + + K+ H+ + AL E G +F W SS+
Sbjct: 369 DYQCKKIASKQLNLKKVLVNGGYLEYKVDTQHLKENGGQKICILALDEAGRIFCWKSSNN 428
Query: 426 DLR-CQQLYSMCGRNVV--SISAGKYWTAAVTATGDVYM--W--DGKKSKDNPPLVTRLH 478
++ C+ +Y GR V ++ + VT G+ + W +G+K + LV+ L
Sbjct: 429 SMKQCRWVY---GRQVFMSDVALNRNEMMFVTQDGEAFTGKWLEEGRKVLEKKELVSSLP 485
Query: 479 GIKKATSVS 487
S S
Sbjct: 486 NASTEMSCS 494
Score = 74 (31.1 bits), Expect = 2.2e-39, Sum P(4) = 2.2e-39
Identities = 29/92 (31%), Positives = 42/92 (45%)
Query: 552 LAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHS 611
L LK +CE A+ L +NA +LLE S A+ LK C N+ +L + +
Sbjct: 856 LISRLKEICEVAIAEKLTL-KNAAELLEFSAMYNAEQLKLSCLQFIGLNMAALL--ETRT 912
Query: 612 FASASLDILADLEKSLDLRSSESWSYRRLPTP 643
S D++ DL S+ R RR+ TP
Sbjct: 913 LDVLSDDVVKDL--SVYYRKMIPAMVRRVITP 942
Score = 50 (22.7 bits), Expect = 2.2e-39, Sum P(4) = 2.2e-39
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 879 DDTPKEIALPPPPTPRSE-GPAWGGAKVPKGSASLREIQSEQSK 921
+ TP + +PP PT ++ G AW + S R++ E+ K
Sbjct: 1179 EPTPL-VTIPPTPTKVAKLGNAWSSSLHSPLPKSFRDLVMEEEK 1221
Score = 37 (18.1 bits), Expect = 2.2e-39, Sum P(4) = 2.2e-39
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 733 QTKSVLERSLAELGVPIELPQAIAASAASPD 763
+ KS S VP +P+ +SA SP+
Sbjct: 1079 EMKSCKGSSALTQSVPQSIPRTKNSSATSPN 1109
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 441 (160.3 bits), Expect = 1.2e-38, Sum P(4) = 1.2e-38
Identities = 148/469 (31%), Positives = 226/469 (48%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGAD 89
D+ V +GS +++ L+ N I R+ FG LH + ++ L+ G D
Sbjct: 20 DVLSVVTKGSENQIKAFLSSHCHNAATI--RDAFGRNALHLVASCGKKGVLDWLIEKGVD 77
Query: 90 PDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL-LSGPVLQVVGS 148
P +D ESGW++LHR++ +GH+ LL+ G ++ ++D + + +DL + VV
Sbjct: 78 PSVKDKESGWTALHRSIFYGHIDCVWSLLKHGVNLYIQDKEGLSALDLVMKDRPTHVVFK 137
Query: 149 GYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVD--SLHGFVIKLISAAKFHSVAVTSL 206
N+ T+V++WG N+ LG G+ + + P VD S G IK + KFHSV ++
Sbjct: 138 --NTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQK 195
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G+VYT G+G GGRLGH D + + PR V GL +AAAK HTV+ TE G
Sbjct: 196 GQVYTCGHGPGGRLGHGD------EQTCLVPRLV-EGLSGHNCSQVAAAKDHTVVLTEDG 248
Query: 267 EVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFTW 322
V+T+G N QLG + PR++ + LK II VAA HT + + V+T
Sbjct: 249 CVYTFGLNIFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTM 307
Query: 323 GCNREGQLGYGTS-NSASNYT-PRVVESLKGKDLVG--VAAAKYHTIVLGADGERVIVAR 378
G N GQLGY N T PR V +L KD+ VAA+ T+ + G+ ++A
Sbjct: 308 GLNG-GQLGYLLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVTTKGDIYLLAD 366
Query: 379 -NLKKSGSTPLKF--------HRKIKL---HVVSIAAGMVHSTALTEDGALFYWASSDPD 426
KK S L H + K+ H+ + A+ G +F W S +
Sbjct: 367 YQCKKLASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRSVNSS 426
Query: 427 LR-CQQLYSMCGRNV-VS-ISAGKYWTAAVTATGDVYM--WDGKKSKDN 470
++ C+ Y R V +S I+ + VT G+ + W +K K +
Sbjct: 427 MKQCRWAYP---RQVFISDIALSRNEILFVTQDGEGFRGKWFEEKRKSS 472
Score = 64 (27.6 bits), Expect = 1.2e-38, Sum P(4) = 1.2e-38
Identities = 29/92 (31%), Positives = 39/92 (42%)
Query: 552 LAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHS 611
L LK +CE VA + +NA LLE + A+ LK C N+ +L S
Sbjct: 855 LISRLKEICE-VALTEKLTLKNAAMLLEFAAMYNAEQLKLSCLQFIGLNMAALLEARSLD 913
Query: 612 FASASLDILADLEKSLDLRSSESWSYRRLPTP 643
S +L DL S+ R RR+ TP
Sbjct: 914 VLSDG--VLKDL--SVFYRKMIPAMERRVITP 941
Score = 48 (22.0 bits), Expect = 1.2e-38, Sum P(4) = 1.2e-38
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 1039 ETPSSIRSIQMEEKAMKDLKRFYSS 1063
E P ++ IQ+EE+A++DL FY +
Sbjct: 1303 EKPLAL--IQIEERAIQDLLVFYEA 1325
Score = 44 (20.5 bits), Expect = 1.2e-38, Sum P(4) = 1.2e-38
Identities = 29/115 (25%), Positives = 39/115 (33%)
Query: 884 EIALPPPPTPRSEGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSE 943
E AL P AW ++ S S R+ E+ K Q R+ D + F E
Sbjct: 1176 ETALSAPSKIPKPANAWASSQHSVSSKSFRDFLVEEKKSVTGQ--RSGDHVKKVCFKGIE 1233
Query: 944 GKVLLSSFMTSKPIPVVSARAQQATDG----DKSTP----PWAASG-TPPSLSRP 989
S + SA +G D P PW +S T PS+ P
Sbjct: 1234 NS-------QSPKVVRCSAHGSPGREGNHISDVPLPDSPNPWLSSSLTAPSVVAP 1281
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 441 (160.3 bits), Expect = 2.3e-38, Sum P(3) = 2.3e-38
Identities = 149/469 (31%), Positives = 226/469 (48%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGAD 89
D+ V +GS +++ L+ N I ++ FG LH + ++ L+ G D
Sbjct: 20 DILSVVTKGSENQIKAFLSSYCYNAATI--KDAFGRNALHLVSSCGKKGVLDWLIEKGVD 77
Query: 90 PDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLL-SGPVLQVVGS 148
P +D ESGW++LHR++ +GH+ LL+ G S+ ++D + + +DLL VV
Sbjct: 78 PLVKDKESGWTALHRSIFYGHIDCVWSLLKHGVSLYIQDKEGLSALDLLMKDRPTHVVFK 137
Query: 149 GYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVD--SLHGFVIKLISAAKFHSVAVTSL 206
N+ T+V++WG N+ LG G+ + + P VD S G IK + KFHSV ++
Sbjct: 138 --NTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQK 195
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G+VYT G+G GGRLGH D + + PR V GL +AAAK HTV+ TE G
Sbjct: 196 GQVYTCGHGPGGRLGHGD------EQTCLVPRLV-EGLSGHNCSQVAAAKDHTVVLTEDG 248
Query: 267 EVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFTW 322
V+T+G N QLG + PR++ + LK II VAA HT + + V+T
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTL 307
Query: 323 GCNREGQLGYGTSNSASNYT--PRVVESLKGKDLVG--VAAAKYHTIVLGADGERVIVAR 378
G N GQLG+ S PR V +L KD+ VAA+ T+ + A G+ ++A
Sbjct: 308 GLNG-GQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTARGDIYLLAD 366
Query: 379 -NLKKSGSTPLKF--------HRKIKL---HVVSIAAGMVHSTALTEDGALFYWASSDPD 426
KK S L H + K+ H+ + A+ G +F W S+
Sbjct: 367 YQCKKLASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRSASSS 426
Query: 427 LR-CQQLYSMCGRNV-VS-ISAGKYWTAAVTATGDVYM--WDGKKSKDN 470
L+ C+ Y R V +S I+ + VT G+ + W +K K +
Sbjct: 427 LKQCRWAYP---RQVFISDIALSRNEILFVTRDGEGFRGKWFEEKRKSS 472
Score = 61 (26.5 bits), Expect = 2.3e-38, Sum P(3) = 2.3e-38
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 552 LAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHS 611
L LK +CE VA + +N++ LLE + A+ LK C N+ +L
Sbjct: 853 LITRLKEICE-VALTEKLTLKNSVMLLEFAAMYNAEQLKLSCLQFIGLNMAALLE----- 906
Query: 612 FASASLDILAD 622
+ SLD+L+D
Sbjct: 907 --ARSLDVLSD 915
Score = 48 (22.0 bits), Expect = 2.3e-38, Sum P(3) = 2.3e-38
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 1039 ETPSSIRSIQMEEKAMKDLKRFYSS 1063
E P ++ IQ+EE+A++DL FY +
Sbjct: 1296 EKPLAL--IQIEERAIQDLLVFYEA 1318
Score = 42 (19.8 bits), Expect = 9.6e-38, Sum P(3) = 9.6e-38
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 979 ASGTPPSLSRPSLRNIQMQQGKQHCLSHSPKTRTAGFSIAPSQ--GSPSDSPGMNRWFKP 1036
A+GTPP+ R L+ + SP + + PS S S S ++ F P
Sbjct: 1063 ANGTPPTYFREDLKPWEK----------SPVLKISAPQPIPSSRIDSSSSSSWVSGSFSP 1112
Query: 1037 EAETPSSIRSI-QMEEKAMK 1055
+ +R+I Q+EE K
Sbjct: 1113 VSPPVVDLRTIMQIEESRQK 1132
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 434 (157.8 bits), Expect = 1.9e-37, Sum P(3) = 1.9e-37
Identities = 149/479 (31%), Positives = 231/479 (48%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGAD 89
D+ V +GS +++ L+ N I +++FG LH + ++ L+ G D
Sbjct: 20 DVLSVVTKGSENQIKAFLSSHCYNAATI--KDVFGRNALHLVSSCGKKGVLDWLIQKGVD 77
Query: 90 PDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL-LSGPVLQVVGS 148
+D ESGW++LHR++ +GH+ LL+ G S+ ++D + + +DL + VV
Sbjct: 78 LLVKDKESGWTALHRSIFYGHIDCVWSLLKHGVSLYIQDKEGLSALDLVMKDRPTHVVFK 137
Query: 149 GYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVD--SLHGFVIKLISAAKFHSVAVTSL 206
N+ T+V++WG N+ LG G+ + + P VD S G IK + KFHSV ++
Sbjct: 138 --NTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQK 195
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G+VYT G+G GGRLGH D + + PR V GL +AAAK HTV+ TE G
Sbjct: 196 GQVYTCGHGPGGRLGHGD------EQTCLVPRLV-EGLNGHNCSQVAAAKDHTVVLTEDG 248
Query: 267 EVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFTW 322
V+T+G N QLG + PR++ + LK II VAA HT + + V+T
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTM 307
Query: 323 GCNREGQLGYGTS-NSASNYT-PRVVESLKGKDLVG--VAAAKYHTIVLGADGERVIVAR 378
G N GQLG N T PR V +L KD+ VAA+ T+ + G+ ++A
Sbjct: 308 GLNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLAD 366
Query: 379 -NLKKSGSTPLKF--------HRKIKL---HVVSIAAGMVHSTALTEDGALFYWASSDPD 426
KK S L H + K+ H+ + A+ G +F W S +
Sbjct: 367 YQCKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRSVNSS 426
Query: 427 LR-CQQLYSMCGRNV-VS-ISAGKYWTAAVTATGDVYM--W--DGKKSKDNPPLVTRLH 478
L+ C+ Y R V +S I+ + VT G+ + W + +KS + +++ LH
Sbjct: 427 LKQCRWAYP---RQVFISDIALNRNEILFVTQDGEGFRGRWFEEKRKSSEKKEILSNLH 482
Score = 59 (25.8 bits), Expect = 1.9e-37, Sum P(3) = 1.9e-37
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 552 LAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHS 611
L LK +CE VA + +NA LLE + A LK C N+ +L
Sbjct: 654 LITRLKEICE-VALTEKLTLKNAAMLLEFAAMYSAKQLKLSCLQFIGLNMAALLE----- 707
Query: 612 FASASLDILAD 622
+ SLD+L+D
Sbjct: 708 --ARSLDVLSD 716
Score = 45 (20.9 bits), Expect = 1.9e-37, Sum P(3) = 1.9e-37
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1039 ETPSSIRSIQMEEKAMKDLKRFYSS 1063
E P ++ IQ+EE A++DL FY +
Sbjct: 1102 EKPLAL--IQIEEHAIQDLLVFYEA 1124
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 433 (157.5 bits), Expect = 3.0e-37, Sum P(4) = 3.0e-37
Identities = 142/467 (30%), Positives = 224/467 (47%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGAD 89
D+ V +GS + ++S LA N + ++ FG H A + ++ L+ G D
Sbjct: 20 DVLSVVTKGSESQIKSFLARYCYNAATV--KDAFGRNAGHLASSCGKKGVLDWLIEKGVD 77
Query: 90 PDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLL-SGPVLQVVGS 148
+D ESGW++LHR++ +GH+ LL+ G S+ ++D + +P+DLL VV
Sbjct: 78 LLVKDKESGWTALHRSVFYGHIDCVWSLLKHGVSLYMQDKEGLSPLDLLMKDRPTHVVFK 137
Query: 149 GYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVD--SLHGFVIKLISAAKFHSVAVTSL 206
++ TEV++WG N+ LG G+ + + P +D S G +K + KFHSV ++
Sbjct: 138 --DTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQK 195
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G+VYT G+GRGGRLGH D + + PR V GL +AAAK HTV+ T+ G
Sbjct: 196 GQVYTCGHGRGGRLGHGD------EQTCLVPRLV-EGLSGHNCSQVAAAKDHTVVLTDDG 248
Query: 267 EVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFTW 322
V+T+G N QLG PR++ + LK II VAA HT + + V+T
Sbjct: 249 CVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTL 307
Query: 323 GCNREGQLGYGTSNSASNY--TPRVVESLKGKDLVG--VAAAKYHTIVLGADGERVIVAR 378
G N GQLG+ + TPR V +L KD+ VAA+ T+ + G+ ++A
Sbjct: 308 GLNG-GQLGHLLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYLLAD 366
Query: 379 -NLKKSGSTPLKFHRKI--------KL---HVVSIAAGMVHSTALTEDGALFYWASSDPD 426
KK + L + + K+ H+ + A+ G +F W S
Sbjct: 367 YQCKKMATKQLNLKKVLVSGGCMEYKVDPEHLTENGGQKICVLAMDGAGRVFCWRSISSS 426
Query: 427 LR-CQQLYSMCGRNVVSISAGKYWTAAVTATGDVYM--WDGKKSKDN 470
L+ C+ Y ++ I+ + VT G+ + W K K++
Sbjct: 427 LKQCRWAYPR-QVSISDIALNRNEILFVTQDGEGFKGKWFEDKRKNS 472
Score = 68 (29.0 bits), Expect = 3.0e-37, Sum P(4) = 3.0e-37
Identities = 29/92 (31%), Positives = 39/92 (42%)
Query: 552 LAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHS 611
L LK +CE + L +NA LLE + A LK C N+ +L + S
Sbjct: 856 LITRLKEICEVALTENLTL-KNAAMLLEFAALYNAGQLKLSCLQFIGLNMAALL--EARS 912
Query: 612 FASASLDILADLEKSLDLRSSESWSYRRLPTP 643
S D+L DL S+ R RR+ TP
Sbjct: 913 LDVLSEDVLKDL--SIFYRKMIPAMERRVITP 942
Score = 45 (20.9 bits), Expect = 3.0e-37, Sum P(4) = 3.0e-37
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1039 ETPSSIRSIQMEEKAMKDLKRFYSS 1063
E P ++ IQ+EE A++DL FY +
Sbjct: 1302 EKPLAL--IQVEEHAIQDLLVFYEA 1324
Score = 38 (18.4 bits), Expect = 3.0e-37, Sum P(4) = 3.0e-37
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 674 TLKNEGDNRLDSFFEPKADANQEISKQVRALRKKLQQIEMLEVKLSNGHILDEQQIAKLQ 733
T+ +NR PK++ + IS ++ +K+ + I L K +N + I
Sbjct: 1124 TIMETEENRQKYGAAPKSNLGKIISHGIKLSQKQRKMIA-LTTKENNSGTNSMEAILTAP 1182
Query: 734 TKS 736
+KS
Sbjct: 1183 SKS 1185
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 434 (157.8 bits), Expect = 4.3e-37, Sum P(3) = 4.3e-37
Identities = 149/479 (31%), Positives = 231/479 (48%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGAD 89
D+ V +GS +++ L+ N I +++FG LH + ++ L+ G D
Sbjct: 20 DVLSVVTKGSENQIKAFLSSHCYNAATI--KDVFGRNALHLVSSCGKKGVLDWLIQKGVD 77
Query: 90 PDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL-LSGPVLQVVGS 148
+D ESGW++LHR++ +GH+ LL+ G S+ ++D + + +DL + VV
Sbjct: 78 LLVKDKESGWTALHRSIFYGHIDCVWSLLKHGVSLYIQDKEGLSALDLVMKDRPTHVVFK 137
Query: 149 GYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVD--SLHGFVIKLISAAKFHSVAVTSL 206
N+ T+V++WG N+ LG G+ + + P VD S G IK + KFHSV ++
Sbjct: 138 --NTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQK 195
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G+VYT G+G GGRLGH D + + PR V GL +AAAK HTV+ TE G
Sbjct: 196 GQVYTCGHGPGGRLGHGD------EQTCLVPRLV-EGLNGHNCSQVAAAKDHTVVLTEDG 248
Query: 267 EVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFTW 322
V+T+G N QLG + PR++ + LK II VAA HT + + V+T
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTM 307
Query: 323 GCNREGQLGYGTS-NSASNYT-PRVVESLKGKDLVG--VAAAKYHTIVLGADGERVIVAR 378
G N GQLG N T PR V +L KD+ VAA+ T+ + G+ ++A
Sbjct: 308 GLNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLAD 366
Query: 379 -NLKKSGSTPLKF--------HRKIKL---HVVSIAAGMVHSTALTEDGALFYWASSDPD 426
KK S L H + K+ H+ + A+ G +F W S +
Sbjct: 367 YQCKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRSVNSS 426
Query: 427 LR-CQQLYSMCGRNV-VS-ISAGKYWTAAVTATGDVYM--W--DGKKSKDNPPLVTRLH 478
L+ C+ Y R V +S I+ + VT G+ + W + +KS + +++ LH
Sbjct: 427 LKQCRWAYP---RQVFISDIALNRNEILFVTQDGEGFRGRWFEEKRKSSEKKEILSNLH 482
Score = 59 (25.8 bits), Expect = 4.3e-37, Sum P(3) = 4.3e-37
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 552 LAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHS 611
L LK +CE VA + +NA LLE + A LK C N+ +L
Sbjct: 855 LITRLKEICE-VALTEKLTLKNAAMLLEFAAMYSAKQLKLSCLQFIGLNMAALLE----- 908
Query: 612 FASASLDILAD 622
+ SLD+L+D
Sbjct: 909 --ARSLDVLSD 917
Score = 45 (20.9 bits), Expect = 4.3e-37, Sum P(3) = 4.3e-37
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1039 ETPSSIRSIQMEEKAMKDLKRFYSS 1063
E P ++ IQ+EE A++DL FY +
Sbjct: 1288 EKPLAL--IQIEEHAIQDLLVFYEA 1310
Score = 41 (19.5 bits), Expect = 3.2e-35, Sum P(3) = 3.2e-35
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 665 TRDNHTKKSTLKNEGDNRLDSFFEPKADANQEISKQVRALRKKLQQ 710
T ++H K +E DN+ +F K++ Q +S++ ++ K ++
Sbjct: 663 TLNSHLNKVNF-HEDDNQKSAFEVYKSNQAQTVSERQKSKPKSCKK 707
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 434 (157.8 bits), Expect = 4.6e-37, Sum P(3) = 4.6e-37
Identities = 149/479 (31%), Positives = 231/479 (48%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGAD 89
D+ V +GS +++ L+ N I +++FG LH + ++ L+ G D
Sbjct: 20 DVLSVVTKGSENQIKAFLSSHCYNAATI--KDVFGRNALHLVSSCGKKGVLDWLIQKGVD 77
Query: 90 PDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL-LSGPVLQVVGS 148
+D ESGW++LHR++ +GH+ LL+ G S+ ++D + + +DL + VV
Sbjct: 78 LLVKDKESGWTALHRSIFYGHIDCVWSLLKHGVSLYIQDKEGLSALDLVMKDRPTHVVFK 137
Query: 149 GYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVD--SLHGFVIKLISAAKFHSVAVTSL 206
N+ T+V++WG N+ LG G+ + + P VD S G IK + KFHSV ++
Sbjct: 138 --NTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQK 195
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G+VYT G+G GGRLGH D + + PR V GL +AAAK HTV+ TE G
Sbjct: 196 GQVYTCGHGPGGRLGHGD------EQTCLVPRLV-EGLNGHNCSQVAAAKDHTVVLTEDG 248
Query: 267 EVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFTW 322
V+T+G N QLG + PR++ + LK II VAA HT + + V+T
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTM 307
Query: 323 GCNREGQLGYGTS-NSASNYT-PRVVESLKGKDLVG--VAAAKYHTIVLGADGERVIVAR 378
G N GQLG N T PR V +L KD+ VAA+ T+ + G+ ++A
Sbjct: 308 GLNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLAD 366
Query: 379 -NLKKSGSTPLKF--------HRKIKL---HVVSIAAGMVHSTALTEDGALFYWASSDPD 426
KK S L H + K+ H+ + A+ G +F W S +
Sbjct: 367 YQCKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRSVNSS 426
Query: 427 LR-CQQLYSMCGRNV-VS-ISAGKYWTAAVTATGDVYM--W--DGKKSKDNPPLVTRLH 478
L+ C+ Y R V +S I+ + VT G+ + W + +KS + +++ LH
Sbjct: 427 LKQCRWAYP---RQVFISDIALNRNEILFVTQDGEGFRGRWFEEKRKSSEKKEILSNLH 482
Score = 59 (25.8 bits), Expect = 4.6e-37, Sum P(3) = 4.6e-37
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 552 LAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHS 611
L LK +CE VA + +NA LLE + A LK C N+ +L
Sbjct: 855 LITRLKEICE-VALTEKLTLKNAAMLLEFAAMYSAKQLKLSCLQFIGLNMAALLE----- 908
Query: 612 FASASLDILAD 622
+ SLD+L+D
Sbjct: 909 --ARSLDVLSD 917
Score = 45 (20.9 bits), Expect = 4.6e-37, Sum P(3) = 4.6e-37
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1039 ETPSSIRSIQMEEKAMKDLKRFYSS 1063
E P ++ IQ+EE A++DL FY +
Sbjct: 1303 EKPLAL--IQIEEHAIQDLLVFYEA 1325
Score = 41 (19.5 bits), Expect = 3.4e-35, Sum P(3) = 3.4e-35
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 665 TRDNHTKKSTLKNEGDNRLDSFFEPKADANQEISKQVRALRKKLQQ 710
T ++H K +E DN+ +F K++ Q +S++ ++ K ++
Sbjct: 663 TLNSHLNKVNF-HEDDNQKSAFEVYKSNQAQTVSERQKSKPKSCKK 707
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 366 (133.9 bits), Expect = 8.2e-35, Sum P(3) = 8.2e-35
Identities = 137/491 (27%), Positives = 224/491 (45%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGAD 89
D+ + +GS ++ L+ N + ++ FG LH + ++ L+ G D
Sbjct: 20 DVLSVITKGSERQIKIFLSSYCYNAATV--KDAFGRNALHLVSSCGKKAVLDWLIEKGVD 77
Query: 90 PDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLL-SGPVLQVVGS 148
+D ESGW++LHR++ +GH+ LL+ G S+ ++D + +P+DLL VV
Sbjct: 78 LLVKDKESGWTALHRSIFYGHINCVWSLLKHGVSLYMQDKEGLSPLDLLMKDRPAHVVFK 137
Query: 149 GYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVD--SLHGFVIKLISAAKFHSVAVTSL 206
N+ TEV++WG N+ LG G+ + + P +D S +K + KFHSV ++
Sbjct: 138 --NTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQ 195
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G+VYT G+GRGGRLGH D + + PR V GL +AAAK HTV+ TE G
Sbjct: 196 GQVYTCGHGRGGRLGHGD------EQTCLVPRLV-EGLSGHSCSQVAAAKDHTVVLTEDG 248
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFTWG 323
V+T+G N QLG + R ++++K + A + V+ S + G
Sbjct: 249 CVYTFGLNTFHQLGIIPPPSSCNVPRQLTVRMKKGHTVVCRKAWRFWQVLWTSEDFLVLG 308
Query: 324 CNREGQLGY-----GTS-------NSASNYTPRVVESLKGKD-LVGVAAAKYHTIVLGAD 370
N G LG G SA + +V + +D V + K LGAD
Sbjct: 309 LN-SGHLGILRKPSGQQCVVSVRQTSAYHILSSLVTLIVDRDESTNVFSVKMQ-FYLGAD 366
Query: 371 G--ERVIVAR-NLKKSGSTPLKFHRKIKL-HVVSIAAGMVHSTALTEDGALFYWASSDPD 426
+R+++ + NLKK + K+ H+ + A+ G +F W S
Sbjct: 367 SIPKRMLIRQLNLKKVLVSGGCMEYKVDPEHLTENGGQKICILAMDGAGRVFCWRSLSSS 426
Query: 427 LR-CQQLYSMCGRNVVSISAGKYWTAAVTATGDVYM--WDGKKSKDNPPLVTRLHGIKKA 483
L+ C+ Y ++ I+ + VT G+ + W K K++ L + +
Sbjct: 427 LKQCRWAYPR-QVSISDIALNRNEILFVTQDGEGFKGKWFEDKRKNSEKKADILPNLHHS 485
Query: 484 TS-VS-VGETH 492
+S VS V +T+
Sbjct: 486 SSDVSCVSDTN 496
Score = 79 (32.9 bits), Expect = 8.2e-35, Sum P(3) = 8.2e-35
Identities = 30/92 (32%), Positives = 41/92 (44%)
Query: 552 LAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHS 611
L LK +CE A+ L +NA LLE + A+ LK C N+ +L + S
Sbjct: 856 LITRLKEMCEVALAENLTL-KNAAMLLEFASMYNAEQLKLSCLQFIGLNMAALL--EARS 912
Query: 612 FASASLDILADLEKSLDLRSSESWSYRRLPTP 643
S D+L DL S+ R RR+ TP
Sbjct: 913 LDVLSEDVLKDL--SIFYRKMVPAMERRVITP 942
Score = 75 (31.5 bits), Expect = 8.2e-35, Sum P(3) = 8.2e-35
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 958 PVVSARAQQATDGDKSTPPWAASGTPPS-LSRPSLRNIQMQQGKQHCLSHSPKTRTAGF- 1015
PVV R T+ ++ + A+ P S L + I++ Q ++ ++ + K +G
Sbjct: 1118 PVVDLRTIMETEANRQK--YGAA--PKSNLGKIISHGIKLSQKQRKMMALTTKENNSGTN 1173
Query: 1016 SIAPSQGSPSDSPG-MNRWFKPEAETPSSIRSIQMEEK 1052
S+ P +PS SP +N W + + SS R+ +EEK
Sbjct: 1174 SMEPILTAPSKSPKPVNAWAPLHSPSSSSFRNFLLEEK 1211
Score = 45 (20.9 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1039 ETPSSIRSIQMEEKAMKDLKRFYSS 1063
E P ++ IQ+EE A++DL FY +
Sbjct: 1302 EKPLAL--IQVEEHAIQDLLVFYEA 1324
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 355 (130.0 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 105/327 (32%), Positives = 156/327 (47%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLG-EVYTWGYG 215
V SWG G + QLG G+A + P ++ +L G I ++ H+VA + G EVY+WG+G
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG 95
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
GRLGH + + TP + + L R+K IA H + T GEV +WG N+
Sbjct: 96 DFGRLGH------GNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 148
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGT 334
GQLG + P+++ + + ++I VAA +HTA V+E G+++ WG R G LG G
Sbjct: 149 NGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG- 207
Query: 335 SNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA-RNLKKSGSTPLKFHR- 392
+ P V S G+ + VA HTI + G + G L+ H
Sbjct: 208 -DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 393 KIKLHVVS------IAAGMVHSTALTEDGALFYWA---------SSDPDLRCQ--QLYSM 435
KL +S I+ G H+ ALT DG L+ W ++ D +C Q+
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD-QCSPVQVRFP 325
Query: 436 CGRNVVSISAGKYWTAAVTATGDVYMW 462
+ VV +S G T AVT +V+ W
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAW 352
Score = 344 (126.2 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 99/311 (31%), Positives = 152/311 (48%)
Query: 127 EDCKSRTPVDLLSGPVLQVVGSG------YNSVATEVFSWGSGANYQLGTGNAHLQKLPC 180
ED S T + L G + V G Y+ EV+SWG G +LG GN+ P
Sbjct: 53 EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPL 112
Query: 181 KVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRV 240
+ +LHG IK I+ H +AVT GEV +WG + G+LG D + + P+++
Sbjct: 113 PIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS------LVPQKI 166
Query: 241 TSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LK 299
+ G R +K +AA HT TE G+++ WG R G LG + P RV+S K
Sbjct: 167 QAFEGIR-IKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAA 359
+ VA +HT VS SG ++T+G ++ GQLG+G + + P +E+L + ++
Sbjct: 226 MSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG--DLEDHLIPHKLEALSNSFISQISG 283
Query: 360 AKYHTIVLGADGE----------RVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHST 409
HT+ L +DG+ +V V NL + ++F K VV ++ G H+
Sbjct: 284 GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK--VVQVSCGWRHTL 341
Query: 410 ALTEDGALFYW 420
A+TE +F W
Sbjct: 342 AVTERNNVFAW 352
Score = 256 (95.2 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 84/299 (28%), Positives = 143/299 (47%)
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRV 249
+ +ISA HSVA+ S V +WG G G+LGH D + +P ++ S L ++
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP------SPTQL-SALDGHQI 69
Query: 250 KTIAAAKHHTVLATEGG-EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAAN 307
++ HTV ++ G EV++WG G+LG+ + TP + +L ++I +A +
Sbjct: 70 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 129
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
H V+ GEV +WG N+ GQLG G ++ + P+ +++ +G + VAA HT +
Sbjct: 130 SHCLAVTMEGEVQSWGRNQNGQLGLG--DTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 187
Query: 368 GADGERVIVARNLKKSGSTPL--KFHRKIKLHVVS--------IAAGMVHSTALTEDGAL 417
DG+ + + G+ L + R + V S +A G H+ +++ GAL
Sbjct: 188 TEDGD--LYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGAL 245
Query: 418 F-Y-WAS----SDPDLRCQ----QLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK 466
+ Y W+ DL +L ++ + IS G T A+T+ G +Y W K
Sbjct: 246 YTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 304
Score = 256 (95.2 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 68/237 (28%), Positives = 121/237 (51%)
Query: 119 QSGASITLEDCKSRTPVDLLSGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNA 173
Q G T ED + G +++V +G + + TE ++ WG G LG G+
Sbjct: 151 QLGLGDT-EDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR 209
Query: 174 HLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAA 233
+ +P +V S G + +++ H+++V+ G +YT+G+ + G+LGH D + H
Sbjct: 210 TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDH----- 264
Query: 234 VITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV 293
+ P ++ + L + + I+ HT+ T G+++ WG N+ GQ+G + Q +P +V
Sbjct: 265 -LIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQV 322
Query: 294 SSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESL 349
K++ V+ +HT V+E VF WG GQLG G S N+ P+++E+L
Sbjct: 323 RFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR-NF-PKIIEAL 377
Score = 243 (90.6 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 60/184 (32%), Positives = 96/184 (52%)
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAA 305
R+V I+A H+V G V +WG +GQLG+ + +P+P ++S+L +I++V
Sbjct: 15 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74
Query: 306 ANKHTAVVSESG-EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
HT S+SG EV++WG G+LG+G NS+ +TP +++L G + +A H
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHG--NSSDLFTPLPIKALHGIRIKQIACGDSHC 132
Query: 365 IVLGADGERVIVARNLKKS---GST-----PLKFHRKIKLHVVSIAAGMVHSTALTEDGA 416
+ + +GE RN G T P K + + +AAG H+ A+TEDG
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 192
Query: 417 LFYW 420
L+ W
Sbjct: 193 LYGW 196
Score = 149 (57.5 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 42/148 (28%), Positives = 74/148 (50%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S + ++++G QLG G+ +P K+++L I IS H++A+TS G++Y
Sbjct: 240 SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYG 299
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG+ + G++G + + Q + + R ++V ++ HT+ TE VF W
Sbjct: 300 WGWNKFGQVGVGN---NLDQCSPVQVRFPDD----QKVVQVSCGWRHTLAVTERNNVFAW 352
Query: 272 GSNREGQLGY-TSVDTQPTPRRVSSLKL 298
G GQLG SVD P+ + +L +
Sbjct: 353 GRGTNGQLGIGESVDRN-FPKIIEALSV 379
Score = 37 (18.1 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 9 HGQKQTLQSPARKSSLGGVQ 28
HG + SP + S+L G Q
Sbjct: 49 HGDAEDRPSPTQLSALDGHQ 68
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 327 (120.2 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 92/283 (32%), Positives = 142/283 (50%)
Query: 150 YNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF-HSVAVTSLGE 208
Y +V E+F G+ LG G+ P ++DSL+G I +S H V T+ GE
Sbjct: 60 YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE 119
Query: 209 VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEV 268
V+TWG+ +LG+ + H + P +++ L +++V +A +H+++ T GEV
Sbjct: 120 VFTWGHNAYSQLGNGTTN-HG-----LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSS-LKLKIIAVAAANKHTAV-VSESGEVFTWGCNR 326
F WG N GQ+G S QP PRRV+ L+ K++ A + + V ++GEV+ WG N
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG 233
Query: 327 EGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGST 386
GQLG G NS + TP V +L+G + VA HT+VL +G+ N T
Sbjct: 234 NGQLGLG--NSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 291
Query: 387 PLKFHRKI-------KLHVVSIAA-GMVH-STALTEDGALFYW 420
K ++ K ++ IAA H S A T+ G ++ W
Sbjct: 292 GNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMW 334
Score = 261 (96.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 81/229 (35%), Positives = 118/229 (51%)
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNS-VAT---EVFSWGSG 163
+GH A S L + L C T +L + V++V Y+S V T EVF+WG
Sbjct: 123 WGHNAY-SQLGNGTTNHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN 179
Query: 164 ANYQLGTGNAHLQKLPCKVDS-LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGH 222
+ Q+G+G+ Q +P +V L V+ I+ + +AV GEVY WGY G+LG
Sbjct: 180 NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL 239
Query: 223 PDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYT 282
+ SG TP RV + L RV+ +A HT++ T+ G+V+ WG+N GQLG
Sbjct: 240 GN----SGNQP--TPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 283 SVDTQPTPRRVSSLKLKIIAVAAANK-HT-AVVSESGEVFTWGCNREGQ 329
+ Q P V+ K +II +AA + HT A ++ G V+ WG R GQ
Sbjct: 293 NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCR-GQ 340
Score = 250 (93.1 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 88/288 (30%), Positives = 139/288 (48%)
Query: 199 HSVAVTSLG-EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA-AAK 256
+ V T++ E++ G G LG D + I PRR+ S L +++ ++ +
Sbjct: 56 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQ------STIEPRRLDS-LNGKKIACLSYGSG 108
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAAANKHTAVVS 314
H VLAT GEVFTWG N QLG + + P +S+ L K +I VA + H+ V++
Sbjct: 109 PHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPR-VVESLKGKDLVGVAAAKYHTIVLGADGER 373
GEVF WG N GQ+G G++ + PR V L+ K +V +A + + + GE
Sbjct: 169 SDGEVFAWGYNNSGQVGSGST--VNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEV 226
Query: 374 VIVARN------LKKSGS--TPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW-ASSD 424
+ N L SG+ TP + + V +A G H+ LT++G ++ W A+S
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286
Query: 425 PDL----RCQQLY----SMCGRNVVSISA--GKYWTAAVTATGDVYMW 462
L + Q Y ++ ++ I+A + +AA T G VYMW
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMW 334
Score = 201 (75.8 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 61/186 (32%), Positives = 90/186 (48%)
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAA- 305
R+ +A + + T E+F G+N G LG V + PRR+ SL K IA +
Sbjct: 46 RQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSY 105
Query: 306 -ANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTP-RVVESLKGKDLVGVAAAKYH 363
+ H + + GEVFTWG N QLG GT+N P + +L K ++ VA YH
Sbjct: 106 GSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHG--LVPCHISTNLSNKQVIEVACGSYH 163
Query: 364 TIVLGADGERVIVARNLKK---SGSTPLK-FHRKIK--LH---VVSIAAGMVHSTALTED 414
++VL +DGE N SGST + R++ L VV+IA G + A+ +
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 223
Query: 415 GALFYW 420
G ++ W
Sbjct: 224 GEVYVW 229
Score = 186 (70.5 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 79/281 (28%), Positives = 119/281 (42%)
Query: 10 GQKQTLQSPARKSSLGGVQKDLCLAVREGS---LADVESALALLKKNGGNI--NSRNIFG 64
G Q+ P R SL G +K CL+ G LA E + N + N G
Sbjct: 81 GDVQSTIEPRRLDSLNG-KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHG 139
Query: 65 LTPLHSAIWRNQVPIVRRLLAAGADPD---ARDGES-GWSSLHRALHFGHLAVASVLLQS 120
L P H + + ++ +A G+ DGE W + G + S + Q
Sbjct: 140 LVPCHISTNLSNKQVIE--VACGSYHSLVLTSDGEVFAWGYNNS----GQVGSGSTVNQP 193
Query: 121 GASITLEDCKSRTPVDLLSGPV--LQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKL 178
+++ V + G + + VV +G EV+ WG N QLG GN+ Q
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVDTG------EVYVWGYNGNGQLGLGNSGNQPT 247
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
PC+V +L G ++ ++ H++ +T G+VY WG G+LG + S Q+ TP
Sbjct: 248 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN---KSNQSYP-TPV 303
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLA-TEGGEVFTWGSNREGQ 278
V R ++ A HT A T+GG V+ WG R GQ
Sbjct: 304 TVEK---DRIIEIAACHSTHTSAAKTQGGHVYMWGQCR-GQ 340
Score = 102 (41.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 398 VVSIAAGMVHSTALTEDGALFYW---------ASSDPDLRCQQLYSMCGRN--VVSISAG 446
V+ +A G HS LT DG +F W + S + + + C +N VV+I+ G
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACG 213
Query: 447 KYWTAAVTATGDVYMWD-------GKKSKDNPPL---VTRLHGIKKATSVSVGETHLLIV 496
+ AV TG+VY+W G + N P V L GI+ V+ G H L++
Sbjct: 214 QMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR-VQRVACGYAHTLVL 272
Query: 497 ---GSLY 500
G +Y
Sbjct: 273 TDEGQVY 279
Score = 74 (31.1 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 556 LKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFASA 615
LK LC+ Q + E NA+ LL + A DL++ C I +L ++T +S FA
Sbjct: 475 LKKLCQQTIKQGICE-ENAIALLSAAVKYDAQDLEEFCFRFCINHLT-VVTQTS-GFAEM 531
Query: 616 SLDIL 620
D+L
Sbjct: 532 DHDLL 536
Score = 41 (19.5 bits), Expect = 9.9e-26, Sum P(2) = 9.9e-26
Identities = 37/171 (21%), Positives = 68/171 (39%)
Query: 440 VVSISA--GKYWTAAVTATGDVYMWDGKKSKDNP-PLVTRLHGIKK--ATSVSVGET-HL 493
++ I+A + +AA T G VYMW + + P +T A + T L
Sbjct: 310 IIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFATPAVTWRL 369
Query: 494 LIVGSLYHPIYPPNVAK---NPQKLKLNGRNDLEEFY-EDFMFNDESNNMPSAI-DKDDS 548
L V H ++ + NP L D + Y + + S++ D +D
Sbjct: 370 LSVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDNEDD 429
Query: 549 GVRLA----PSLKSLCENVAAQCL-VEPRNALQLLEISDSLGADDLKKHCE 594
V ++ P ++ E + + + P A+ LL+++ + LKK C+
Sbjct: 430 IVEMSEFSYPVYRAFLEYLYTDSISLSPEEAVGLLDLATFYRENRLKKLCQ 480
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 323 (118.8 bits), Expect = 8.2e-29, Sum P(2) = 8.2e-29
Identities = 91/283 (32%), Positives = 142/283 (50%)
Query: 150 YNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF-HSVAVTSLGE 208
Y +V E+F G+ + LG G+ P ++DSL G I +S H V T+ GE
Sbjct: 60 YTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGE 119
Query: 209 VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEV 268
V+TWG+ +LG+ + H + P +++ L +++V +A +H+++ T GEV
Sbjct: 120 VFTWGHNAYSQLGNGTTN-HG-----LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSS-LKLKIIA-VAAANKHTAVVSESGEVFTWGCNR 326
F WG N GQ+G S QP PRRV+ L+ K++ +A + V ++GEV+ WG N
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 327 EGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGST 386
GQLG G+S + TP V +L+G + VA HT+VL +G+ N T
Sbjct: 234 NGQLGLGSSGNQP--TPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGT 291
Query: 387 PLKFHRKI-------KLHVVSIAA-GMVH-STALTEDGALFYW 420
K ++ K ++ IAA H S A T+ G ++ W
Sbjct: 292 GNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMW 334
Score = 261 (96.9 bits), Expect = 9.6e-22, Sum P(2) = 9.6e-22
Identities = 81/229 (35%), Positives = 117/229 (51%)
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNS-VAT---EVFSWGSG 163
+GH A S L + L C T +L + V++V Y+S V T EVF+WG
Sbjct: 123 WGHNAY-SQLGNGTTNHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN 179
Query: 164 ANYQLGTGNAHLQKLPCKVDS-LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGH 222
+ Q+G+G+ Q +P +V L V+ I+ + S+AV GEVY WGY G+LG
Sbjct: 180 NSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGL 239
Query: 223 PDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYT 282
SG TP RV + L RV+ +A HT++ T+ G+++ WG+N GQLG
Sbjct: 240 GS----SGNQP--TPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Query: 283 SVDTQPTPRRVSSLKLKIIAVAAANK-HT-AVVSESGEVFTWGCNREGQ 329
+ Q P V K +II +AA + HT A ++ G V+ WG R GQ
Sbjct: 293 NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCR-GQ 340
Score = 261 (96.9 bits), Expect = 9.6e-22, Sum P(2) = 9.6e-22
Identities = 88/287 (30%), Positives = 138/287 (48%)
Query: 199 HSVAVTSLG-EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
+ V T++ E++ G G LG D + I PRR+ S G + +
Sbjct: 56 NEVLYTTVNDEIFVLGTNCSGCLGVGDIQ------STIEPRRLDSLTGKKIASLSYGSGP 109
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAAANKHTAVVSE 315
H VLAT GEVFTWG N QLG + + P +S+ L K +I VA + H+ V++
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 316 SGEVFTWGCNREGQLGYGTSNSASNYTPR-VVESLKGKDLVGVAAAKYHTIVLGADGERV 374
GEVF WG N GQ+G G++ A+ PR V L+ K ++ +A + ++ + GE
Sbjct: 170 DGEVFAWGYNNSGQVGSGST--ANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVY 227
Query: 375 IVARN------LKKSGS--TPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW-ASSDP 425
+ N L SG+ TP + + V +A G H+ LT++G ++ W A+S
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 426 DL----RCQQLYS---MCGRN-VVSISA--GKYWTAAVTATGDVYMW 462
L + Q Y + ++ ++ I+A + +AA T G VYMW
Sbjct: 288 QLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMW 334
Score = 205 (77.2 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 60/186 (32%), Positives = 91/186 (48%)
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAA- 305
R+ +A + + T E+F G+N G LG + + PRR+ SL K IA +
Sbjct: 46 RQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSY 105
Query: 306 -ANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTP-RVVESLKGKDLVGVAAAKYH 363
+ H + + GEVFTWG N QLG GT+N P + +L K ++ VA YH
Sbjct: 106 GSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHG--LVPCHISTNLSNKQVIEVACGSYH 163
Query: 364 TIVLGADGERVIVARNLKK---SGSTPLK-FHRKIK--LH---VVSIAAGMVHSTALTED 414
++VL +DGE N SGST + R++ L V++IA G + S A+ +
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT 223
Query: 415 GALFYW 420
G ++ W
Sbjct: 224 GEVYVW 229
Score = 75 (31.5 bits), Expect = 8.2e-29, Sum P(2) = 8.2e-29
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 529 DFMFNDESNNMPS-AIDKDDSGVRLAPS-LKSLCENVAAQCLVEPRNALQLLEISDSLGA 586
++++ D + P A+ D + + LK LC+ Q + E NA+ LL + A
Sbjct: 446 EYLYTDNISLSPEEAVGLLDLATFYSETRLKKLCQQTIKQGICE-ENAIALLSAAVKYDA 504
Query: 587 DDLKKHCEDIAIRNLDYILTVSSHSFASASLDIL 620
DL++ C I +L ++T +S FA D+L
Sbjct: 505 QDLEEFCFRFCINHLT-VVTQTS-GFAEMDHDLL 536
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 329 (120.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 131/462 (28%), Positives = 210/462 (45%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGY 214
EV+ G + LGTG++ P K+D L G +I L + H + VT GE+Y WG+
Sbjct: 42 EVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGH 101
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
+LG+ + Q ++P V++ L +RV ++ HH++ T GEVF WG N
Sbjct: 102 NGYSQLGNGT----TNQG--VSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYN 155
Query: 275 REGQLGYTSVDTQPTPRRVSS-LKLKIIA-VAAANKHTAVVSESGEVFTWGCNREGQLGY 332
GQ+G S QPTPR+VS+ L+ K+I +A + V+++GEV+ WG N GQLG
Sbjct: 156 NCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGL 215
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNL-------KKSGS 385
G N+ + TP + +L+G ++ +A+ H++ L +G N KS
Sbjct: 216 G--NNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQ 273
Query: 386 -TPLKFHRKIKLHVVSIAA-GMVH-STALTEDGALFYWASSDPDLRCQQLYSMCGRNVVS 442
+P++ + K +V IAA H S A T+ G ++ W +C+ +
Sbjct: 274 LSPVQVMTE-KERIVEIAACHSTHTSAAKTQSGQVYMWG------QCRGQAIVLPHLTHF 326
Query: 443 ISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKA-TSVSVGETHLLIVGSLYH 501
S + A AT V MW S ++ +T +KK + + I G H
Sbjct: 327 ASTDDVF--ACFATPSV-MWR-MLSMEHDDFLTVAQSLKKEFDNPETSDLEFSIDGKYIH 382
Query: 502 PIYPPNVAKNPQKLKLNGRNDLEEFYEDFMFNDESN-NMPSAIDKDDSGVRLAPSLKSLC 560
V K K++ E F MF N +M I+ D P +S
Sbjct: 383 ------VHKAVLKIRC------EHFRS--MFQSHWNEDMKEVIEIDQFSY---PVYRSFL 425
Query: 561 ENVAAQCL-VEPRNALQLLEISDSLGADDLKKHCEDIAIRNL 601
E + + + P +A+ LL+++ S + LKK C+ I R +
Sbjct: 426 EFLYTDSVDLPPEDAIGLLDLATSYCENRLKKLCQHIIKRGI 467
Score = 179 (68.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 58/188 (30%), Positives = 95/188 (50%)
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT--PRRVSSLK-LKIIAV 303
R+ A+ + + T EV+ G N LG T D+Q T P+++ L K+I++
Sbjct: 22 RQACIFGASANEAIYITHDDEVYVLGLNCSNCLG-TG-DSQSTIAPKKLDCLSGKKLISL 79
Query: 304 A-AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES-LKGKDLVGVAAAK 361
+ + H +V+E GE++ WG N QLG GT+N +P +V + L+GK + V+
Sbjct: 80 SYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQG--VSPILVSTNLQGKRVTEVSCGS 137
Query: 362 YHTIVLGADGERVIVARN---LKKSGST-----PLKFHRKIKLHV-VSIAAGMVHSTALT 412
+H++ L +GE N SGST P K ++ V V+IA G S A+T
Sbjct: 138 HHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVT 197
Query: 413 EDGALFYW 420
++G ++ W
Sbjct: 198 DNGEVYGW 205
Score = 62 (26.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 529 DFMFNDESNNMPS-AIDKDDSGVRLAPS-LKSLCENVAAQCLVEPRNALQLLEISDSLGA 586
+F++ D + P AI D + LK LC+++ + + NA LL + A
Sbjct: 426 EFLYTDSVDLPPEDAIGLLDLATSYCENRLKKLCQHIIKRGITV-ENAFSLLSAAIRYDA 484
Query: 587 DDLKKHCEDIAIRNL 601
+DL++ C + +L
Sbjct: 485 EDLEEFCFKFCVNHL 499
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 316 (116.3 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 93/284 (32%), Positives = 143/284 (50%)
Query: 150 YNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF-HSVAVTSLGE 208
Y + EVF +G + LGTG++ +P K+++L G I +S H + T GE
Sbjct: 36 YTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGE 95
Query: 209 VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEV 268
VY WG+ +LG+ + Q +TP +V + L ++V +A HH++ + G++
Sbjct: 96 VYAWGHNGYSQLGNGA----TNQG--VTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDL 149
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAAANKHTAVVSESGEVFTWGCNR 326
+ WG N GQ+G S QPTPRRVS+ L+ K ++ +A + V +GEV+ WG N
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNG 209
Query: 327 EGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNL------ 380
GQLG G N+ + TP V +L G ++ +A HT+ L +G N
Sbjct: 210 NGQLGLG--NNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 381 -KKSGS-TPLKFHRKIKLHVVSIAA-GMVH-STALTEDGALFYW 420
KS +PL+ + K VV IAA H S A T+ G ++ W
Sbjct: 268 GNKSNQLSPLQIMME-KERVVEIAACHSAHTSAAKTQSGQVYMW 310
Score = 259 (96.2 bits), Expect = 9.8e-20, Sum P(2) = 9.8e-20
Identities = 86/286 (30%), Positives = 148/286 (51%)
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA-AAKHH 258
++ T EV+ +G LG D Q+ ++ P+++ + G +++ +++ + H
Sbjct: 34 AIYTTHNDEVFVFGLNCSNCLGTGD-----SQSTIV-PKKLEALCG-KKISSLSYGSGPH 86
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV-SSLKLK-IIAVAAANKHTAVVSES 316
+L TE GEV+ WG N QLG + + TP +V ++L LK +I VA + H+ +S
Sbjct: 87 VLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFD 146
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVES-LKGKDLVGVAAAKYHTIVLGADGERVI 375
G+++ WG N GQ+G G++ A+ TPR V + L+ K +VG+A + ++ + +GE
Sbjct: 147 GDLYAWGYNNCGQVGSGST--ANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYG 204
Query: 376 VARN------LKKSGS--TPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW-ASSDPD 426
N L +G+ TP + + ++ IA G H+ ALT++G L+ W A++
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 427 L----RCQQL----YSMCGRNVVSISA--GKYWTAAVTATGDVYMW 462
L + QL M VV I+A + +AA T +G VYMW
Sbjct: 265 LGTGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMW 310
Score = 228 (85.3 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 67/208 (32%), Positives = 112/208 (53%)
Query: 133 TPV----DLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDS 184
TPV +LL V++V ++S+A ++++WG Q+G+G+ Q P +V +
Sbjct: 117 TPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSN 176
Query: 185 -LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSG 243
L ++ I+ + S+AV + GEVY WGY G+LG + +G +TP RV +
Sbjct: 177 CLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN----NGNQ--LTPCRVAA- 229
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAV 303
L + IA HT+ T+ G ++ WG+N GQLG + Q +P ++ K +++ +
Sbjct: 230 LHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEI 289
Query: 304 AAANK-HT-AVVSESGEVFTWGCNREGQ 329
AA + HT A ++SG+V+ WG R GQ
Sbjct: 290 AACHSAHTSAAKTQSGQVYMWGQCR-GQ 316
Score = 169 (64.5 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 58/201 (28%), Positives = 96/201 (47%)
Query: 234 VITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT--PR 291
+++P+ + S R+ + + + T EVF +G N LG T D+Q T P+
Sbjct: 12 LLSPQEIAS---IRKACVFGTSANEAIYTTHNDEVFVFGLNCSNCLG-TG-DSQSTIVPK 66
Query: 292 RVSSL-KLKIIAVA-AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTP-RVVES 348
++ +L KI +++ + H + +E GEV+ WG N QLG G +N TP +V +
Sbjct: 67 KLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQG--VTPVQVCTN 124
Query: 349 LKGKDLVGVAAAKYHTIVLGADGERVIVARN---LKKSGST-----PLKFHRKIK-LHVV 399
L K ++ VA +H++ L DG+ N SGST P + ++ VV
Sbjct: 125 LLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVV 184
Query: 400 SIAAGMVHSTALTEDGALFYW 420
IA G S A+ +G ++ W
Sbjct: 185 GIACGQTSSMAVVNNGEVYGW 205
Score = 57 (25.1 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 18/75 (24%), Positives = 34/75 (45%)
Query: 529 DFMFNDESNNMPS-AIDKDDSGVRLAPS-LKSLCENVAAQCLVEPRNALQLLEISDSLGA 586
++++ D + P AI D + LK LC+++ + + NA LL + A
Sbjct: 426 EYLYTDSVDLPPEDAIGLLDLATSYCENRLKKLCQHIIKRGITV-ENAFSLLSAAVRYDA 484
Query: 587 DDLKKHCEDIAIRNL 601
+DL+ C + +L
Sbjct: 485 EDLEDFCFKFCVNHL 499
Score = 53 (23.7 bits), Expect = 7.4e-26, Sum P(2) = 7.4e-26
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 571 PRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFASASLDILA-DLE 624
P +A+ LL+++ S + LKK C+ I R I ++ S SA++ A DLE
Sbjct: 437 PEDAIGLLDLATSYCENRLKKLCQHIIKRG---ITVENAFSLLSAAVRYDAEDLE 488
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 95/322 (29%), Positives = 148/322 (45%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFV-IKLISAAKFHSVAVTSLGEVYTWGY 214
+V+SWG+G + QLGT + LP ++ SL I +++ H +A+TS G+V+TWG
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLP-QLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGR 74
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G G+LGH G IT ++ S + AA H+ ++ G +FT G+
Sbjct: 75 GSSGQLGH-------GDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNG 127
Query: 275 REGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
GQLG+ + TP +VS + VA +H+ V+ +V +G + GQLG+
Sbjct: 128 SFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFS 187
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRK 393
+ S P VV LK ++V ++A H+ + ADG+ R
Sbjct: 188 SDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLP 247
Query: 394 IKLHVVSIAAGMVHSTALTEDGALFYWASS---DPDLRCQQLYS----------MCGRNV 440
L +A G H+ LT DG +F S+ P+ + Q+ S G V
Sbjct: 248 SPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKV 307
Query: 441 VSISAGKYWTAAVTATGDVYMW 462
+ I+AG +AAVT G+V W
Sbjct: 308 MQIAAGAEHSAAVTENGEVKTW 329
Score = 225 (84.3 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 69/205 (33%), Positives = 105/205 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQK--LPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
+V +GSG QLG + ++ LPC V L + ISA HS A+++ G+ ++WG
Sbjct: 172 QVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWG 231
Query: 214 YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
G G PD +H+ P+ + S L R V A +H +L T GEVF GS
Sbjct: 232 RGF---CGGPD--VHA-------PQSLPSPLSFREV---AVGWNHALLLTVDGEVFKLGS 276
Query: 274 --NREGQLGYTSVDTQPTP-RRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQ 329
N++ + +D+ +V +K++ +AA +H+A V+E+GEV TWG GQ
Sbjct: 277 TLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQ 336
Query: 330 LGYGTSNSASNYTPRVVESLKGKDL 354
LG G +N ++ P +V SL DL
Sbjct: 337 LGLGNTNDQTS--PELV-SLGSIDL 358
Score = 158 (60.7 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 61/227 (26%), Positives = 103/227 (45%)
Query: 148 SGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLG 207
SG+ S + +F+ G+G+ QLG G+ P KV + +K+++ HS+ + +
Sbjct: 112 SGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGN 171
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGE 267
+V +G G+ G+LG I S V P V SGL V I+A H+ + G+
Sbjct: 172 QVCGFGSGKRGQLGFSSDRIKS----VNLPC-VVSGLKDVEVVRISANGDHSAAISADGQ 226
Query: 268 VFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGC--N 325
F+WG G G V P+ + S L VA H +++ GEVF G N
Sbjct: 227 FFSWG---RGFCGGPDVHA---PQSLPS-PLSFREVAVGWNHALLLTVDGEVFKLGSTLN 279
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
++ + +S+ +V + G ++ +AA H+ + +GE
Sbjct: 280 KQPEKQQLQIDSSEALFEKVPD-FDGVKVMQIAAGAEHSAAVTENGE 325
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/169 (30%), Positives = 73/169 (43%)
Query: 255 AKHHTVLATEGGE--VFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAV-AAANKHTA 311
A+H A E E V++WG+ +GQLG T + + P+ +S L I++ A H
Sbjct: 2 AEHGETQADEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVI 61
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYT-PRVVESLKGKDLVGVAAAKYHT------ 364
++ G+VFTWG GQLG+G N T P++V + AA H+
Sbjct: 62 ALTSGGKVFTWGRGSSGQLGHG---DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDS 118
Query: 365 --IVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTAL 411
I +G + S STP K V +A GM HS L
Sbjct: 119 GCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVL 167
Score = 129 (50.5 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 53/187 (28%), Positives = 79/187 (42%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHL-QKLPCKVDSLHGFVIKLISAA 196
V+++ +G +S A + FSWG G G + H Q LP + + ++
Sbjct: 208 VVRISANGDHSAAISADGQFFSWGRGF---CGGPDVHAPQSLPSPLS------FREVAVG 258
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
H++ +T GEV+ G + I S +A +V G + V IAA
Sbjct: 259 WNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALF---EKVPDFDGVK-VMQIAAGA 314
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS----SLKLKIIAVAAANKHTAV 312
H+ TE GEV TWG GQLG + + Q +P VS L+ K I V + T
Sbjct: 315 EHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVYCGSGFTYA 374
Query: 313 VSESGEV 319
V E+
Sbjct: 375 VKRKQEL 381
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 319 (117.4 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 78/220 (35%), Positives = 120/220 (54%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGR 216
V+S G + QLG + K P + +L I L+S K HSVAV G V+TWG G
Sbjct: 49 VYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGS 108
Query: 217 GGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE 276
G+LG I + P ++ S G + ++ ++ +H++ +E G+VF+WGSNR+
Sbjct: 109 EGQLG-----IGESKEISFMPTKINSLAGIKIIQ-VSCGHYHSLALSEDGQVFSWGSNRQ 162
Query: 277 GQLGY-TSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGT 334
GQLG ++ +Q +P++V SL+ + + VAA H+ +S G F WG NR GQL +
Sbjct: 163 GQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLAL-S 221
Query: 335 SNSASN--YTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
NSA Y P + +LK ++V ++ HT VL DG+
Sbjct: 222 GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQ 261
Score = 313 (115.2 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 104/298 (34%), Positives = 149/298 (50%)
Query: 187 GFVIKLISAA--KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
G +KL+ AA + HS+ + S VY+ G G+LG S Q+ P + + L
Sbjct: 25 GTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-----SPQSTK-RPEPIQA-L 77
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLK-LKIIA 302
+ + ++ K H+V G VFTWG+ EGQLG S + P +++SL +KII
Sbjct: 78 STVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQ 137
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKY 362
V+ + H+ +SE G+VF+WG NR+GQLG G +N S +P+ V+SL+G L VAA
Sbjct: 138 VSCGHYHSLALSEDGQVFSWGSNRQGQLGLG-NNLCSQASPQKVKSLEGIPLAQVAAGGT 196
Query: 363 HTIVLGADGERVIVARN----LKKSGSTP----LKFHR--KIK-LHVVSIAAGMVHSTAL 411
H+ L G N L SG++ K H +K L+VV I+ G H++ L
Sbjct: 197 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 256
Query: 412 TEDGALF-YWASSDPDLRCQ--------QLYSMCGRNVVSISAGKYWTAA-VTATGDV 459
TEDG +F + SS L+ QL G +V I G Y T A V TG V
Sbjct: 257 TEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQV 314
Score = 244 (91.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 62/198 (31%), Positives = 96/198 (48%)
Query: 237 PRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL 296
PRR+ +G G + +K A+ + H++L V++ G N GQLG S + P + +L
Sbjct: 19 PRRLEAGTGLKLLKA-ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 77
Query: 297 K-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV 355
+ I V+ +H+ V G VFTWG EGQLG G S S + P + SL G ++
Sbjct: 78 STVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKINSLAGIKII 136
Query: 356 GVAAAKYHTIVLGADGE----------RVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGM 405
V+ YH++ L DG+ ++ + NL S P K + + +AAG
Sbjct: 137 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQAS-PQKVKSLEGIPLAQVAAGG 195
Query: 406 VHSTALTEDGALFYWASS 423
HS AL+ G F W ++
Sbjct: 196 THSFALSLMGTSFGWGNN 213
Score = 216 (81.1 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 75/264 (28%), Positives = 119/264 (45%)
Query: 133 TPVDLLSG-PVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHL-QKLPCKVDSLH 186
T ++ L+G ++QV Y+S+A +VFSWGS QLG GN Q P KV SL
Sbjct: 125 TKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLE 184
Query: 187 GFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGS 246
G + ++A HS A++ +G + WG R G+L +S + + P + L +
Sbjct: 185 GIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLA---LSGNSAKEQIYKPHSI-GALKT 240
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAA 306
V I+ HT + TE G+VFT+G + QL ++ + P+ + + + +
Sbjct: 241 LNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECG 300
Query: 307 NKHT-AVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTI 365
+ HT A V +G+V + G G + V L KDLV + + I
Sbjct: 301 SYHTIAYVYTTGQVVSLG---RGPSCTSNATHQEAACSDVTCLLSAKDLVDI---EVKDI 354
Query: 366 VLGADGERVIVARNLKKSGSTPLK 389
GA V R+ + S S +K
Sbjct: 355 FAGAHANFVTTCRHTR-STSVSMK 377
Score = 146 (56.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 47/199 (23%), Positives = 91/199 (45%)
Query: 290 PRRVSS-LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 348
PRR+ + LK++ A+ +H+ ++ + V++ G N GQLG + S P +++
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKR--PEPIQA 76
Query: 349 LKGKDLVGVAAAKYHTIVL---------GADGERVIVARNLKKSGSTPLKFHRKIKLHVV 399
L + V+ K H++ + GA E + K+ P K + + ++
Sbjct: 77 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKII 136
Query: 400 SIAAGMVHSTALTEDGALFYWASSDP------DLRC-----QQLYSMCGRNVVSISAGKY 448
++ G HS AL+EDG +F W S+ + C Q++ S+ G + ++AG
Sbjct: 137 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 196
Query: 449 WTAAVTATGDVYMWDGKKS 467
+ A++ G + W +S
Sbjct: 197 HSFALSLMGTSFGWGNNRS 215
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 299 (110.3 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 90/330 (27%), Positives = 157/330 (47%)
Query: 113 VASVLLQSGASITLEDCKSRTPVDLLS---GPVLQVVGSGYNSVATEVFSWGSGANYQLG 169
VA++L +S S +L R D S G + SG ++ +++ WG G +LG
Sbjct: 75 VANLLFRSDQSFSLAQTPGRIDADSSSFRIGISCGLFHSGL-TIDGDLWIWGKGDGGRLG 133
Query: 170 TGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHS 229
G + +P I+ I+ HSVA+T G+V+TWGYG G LGH +++
Sbjct: 134 FGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHK---VYT 190
Query: 230 GQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR-EGQLGY------T 282
+ + PRRV + + IA + HT TE GE++ WG +G+LG
Sbjct: 191 RE---LVPRRVDDSWDCK-ISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPN 246
Query: 283 SVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYT 342
P +V +L + + +V+ T +++ G+++ WG N +LG G ++ +
Sbjct: 247 EGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWE 304
Query: 343 PRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSGSTPLKFHRKIKLHV--- 398
P V SL+G + +A YH++ L +G+ + + GS+ L+ ++K+ +
Sbjct: 305 PMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLR-NQKVPTEIEAL 363
Query: 399 -----VSIAAGMVHSTALTEDGALFYWASS 423
V IA+G S A+T+ G L+ W ++
Sbjct: 364 ADKKIVFIASGGSSSAAITDGGELWMWGNA 393
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 64/232 (27%), Positives = 107/232 (46%)
Query: 156 EVFSWG---SGANYQLGTGNAHLQ----KLPCKVDSLHGFVIKLISAAKFHSVAVTSLGE 208
E++ WG LG G + +P KV +L + +S F ++A+T G+
Sbjct: 224 ELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQ 282
Query: 209 VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEV 268
++ WG LG D ++ + P V S L R+ IA +H++ TE G+V
Sbjct: 283 LWNWGANSNYELGRGD-NLGGWE-----PMPVPS-LEGVRITQIACGGYHSLALTEEGKV 335
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNRE 327
+WG GQLG +S+ Q P + +L KI+ +A+ +A +++ GE++ WG ++
Sbjct: 336 LSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKD 395
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN 379
QLG TP V L +D K +I +GA +V+R+
Sbjct: 396 FQLGVPGLPEIQT-TPVEVNFLTEED--ECQPHKVISISIGASHALCLVSRS 444
Score = 196 (74.1 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 58/195 (29%), Positives = 99/195 (50%)
Query: 135 VDLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVI 190
V L+ PV V G+ ++A ++++WG+ +NY+LG G+ P V SL G I
Sbjct: 257 VKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRI 316
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
I+ +HS+A+T G+V +WG+G G+LG Q P + + L +++
Sbjct: 317 TQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL---RNQKV---PTEIEA-LADKKIV 369
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV-DTQPTPRRVSSLKL-------KIIA 302
IA+ + T+GGE++ WG+ ++ QLG + + Q TP V+ L K+I+
Sbjct: 370 FIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVIS 429
Query: 303 VAAANKHT-AVVSES 316
++ H +VS S
Sbjct: 430 ISIGASHALCLVSRS 444
Score = 184 (69.8 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 64/197 (32%), Positives = 91/197 (46%)
Query: 153 VATEVFSWGSGANYQLGTGNAHLQKLPCKVDSL-----HGFVIKLISA---AKFHSVAV- 203
V ++FSWG GA+ QLG G ++ P V +L F + A S +
Sbjct: 46 VTLQLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIG 105
Query: 204 TSLGEVYTWGYGRGGRL---GHPDFD-IHSGQA-AVITPRRVTSGLGSRRVKTIAAAKHH 258
S G ++ G G L G D + GQ +V P + ++ IA H
Sbjct: 106 ISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLH 163
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-SLKLKIIAVAAANKHTAVVSESG 317
+V T G+VFTWG G LG+ + PRRV S KI A+A + HTA ++ESG
Sbjct: 164 SVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESG 223
Query: 318 EVFTWGCNR-EGQLGYG 333
E++ WG +G+LG G
Sbjct: 224 ELYMWGREEGDGRLGLG 240
Score = 94 (38.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 396 LHVVSIAAGMVHSTALTEDGALFYWASS------DPDLRCQ----QLYSMCGRNVVSISA 445
+ + IA G HS ALTE+G + W LR Q ++ ++ + +V I++
Sbjct: 314 VRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIAS 373
Query: 446 GKYWTAAVTATGDVYMWDGKK 466
G +AA+T G+++MW K
Sbjct: 374 GGSSSAAITDGGELWMWGNAK 394
Score = 76 (31.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW-ASSDPDL-RCQQLY--------S 434
S P K + + + V S++ G + ALT++G L+ W A+S+ +L R L S
Sbjct: 252 SVPSKV-KALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPS 310
Query: 435 MCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G + I+ G Y + A+T G V W
Sbjct: 311 LEGVRITQIACGGYHSLALTEEGKVLSW 338
Score = 49 (22.3 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 431 QLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKS-----KDNPPLVTRLHGIK---- 481
++ ++ + +V I++G +AA+T G+++MW K P + T +
Sbjct: 359 EIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTE 418
Query: 482 -------KATSVSVGETHLLIVGS 498
K S+S+G +H L + S
Sbjct: 419 EDECQPHKVISISIGASHALCLVS 442
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 314 (115.6 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 93/287 (32%), Positives = 135/287 (47%)
Query: 156 EVFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
E FSWG + +LG G ++++Q+ P +D+L+ I+L++ +FHS AVT G++YTWG
Sbjct: 328 ESFSWGEESEGRLGHGVDSNIQQ-PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGK 386
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G G LGH + + P+RV L V +IA +HT + T G++FT+G
Sbjct: 387 GDFGVLGH------GNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDG 440
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSE------------SGEVFT 321
G LG+ + PR V SLK L+ + A HTA V E SG++FT
Sbjct: 441 TFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 500
Query: 322 WGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVAR--- 378
WG +G+LG+G N P V +L + VA T+ L G +
Sbjct: 501 WGDGDKGRLGHG--NKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVY 558
Query: 379 ----NLKKSGSTPLKFHRKI-KLHVVSIAAGMVHSTALTEDGALFYW 420
N G TP + K+ K V IA G H LT ++ W
Sbjct: 559 GQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTW 605
Score = 263 (97.6 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 74/232 (31%), Positives = 115/232 (49%)
Query: 147 GSGYNS--VATEVFSWGSGANYQ-LGTGNAHL-QKLPCKVDSL------HGFVIKL--IS 194
GSG++ +VF WG G LG GN + K+DSL V+ + I+
Sbjct: 255 GSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIA 314
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
H+V VT GE ++WG GRLGH G + I ++ L + ++ +A
Sbjct: 315 CGGQHAVLVTKQGESFSWGEESEGRLGH-------GVDSNIQQPKLIDALNTTNIELVAC 367
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK--LKIIAVAAANKHTAV 312
+ H+ T G+++TWG G LG+ + + P+RV+ L + + ++A HTAV
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427
Query: 313 VSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
V+ +G++FT+G G LG+G S + PR V+SLKG V A +HT
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSV--FIPREVDSLKGLRTVRAACGVWHT 477
Score = 223 (83.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 76/247 (30%), Positives = 113/247 (45%)
Query: 137 LLSGPVLQVVGSG--YNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIK 191
LL G + + G + +V T ++F++G G LG G+ +P +VDSL G
Sbjct: 409 LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTV 468
Query: 192 LISAAKFHSVAVT------------SLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRR 239
+ +H+ AV S G+++TWG G GRLGH + + P
Sbjct: 469 RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH------GNKEPKLVPTC 522
Query: 240 VTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK 299
V + L +A TV T G V+T GS GQLG + D + TP RV K
Sbjct: 523 VAA-LVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGK-TPNRVEGKLHK 580
Query: 300 --IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGV 357
+ +A H AV++ EV+TWG G+LG+G + ++ P +VESLK K + +
Sbjct: 581 SFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNS--PTLVESLKDKQVKSI 638
Query: 358 AAAKYHT 364
A T
Sbjct: 639 ACGTNFT 645
Score = 201 (75.8 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 60/176 (34%), Positives = 90/176 (51%)
Query: 142 VLQV-VGSGYNSVAT--EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF 198
V++V VGS +S + ++F+WG G +LG GN + +P V +L ++
Sbjct: 480 VVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHS 539
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
+VA+T+ G VYT G G+LG+ D G+ TP RV L V+ IA +H
Sbjct: 540 LTVALTTSGHVYTMGSPVYGQLGNSHAD---GK----TPNRVEGKLHKSFVEEIACGAYH 592
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKII-AVAAANKHTAVV 313
+ T EV+TWG G+LG+ VD + +P V SLK K + ++A TA V
Sbjct: 593 VAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648
Score = 164 (62.8 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 57/217 (26%), Positives = 105/217 (48%)
Query: 227 IHSGQAAVITPRRVTSGLGSRRVKTIAA--AKHHTVLATEG---GEVFTWGSN-REGQLG 280
+HSG + + G+ + RV +A + H +G G+VF WG EG LG
Sbjct: 221 VHSGGSDSMHGHMRGMGMDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLG 280
Query: 281 Y------TSVDTQPT---PRRV-SSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
+S D + P+ + S++ L + +A +H +V++ GE F+WG EG+L
Sbjct: 281 GGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRL 340
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT--IVLGAD------GERVIVARNLKK 382
G+G ++ P+++++L ++ VA ++H+ + L D G+ ++ +
Sbjct: 341 GHGVDSNIQQ--PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEV 398
Query: 383 SGSTPLKFHRKIK-LHVVSIAAGMVHSTALTEDGALF 418
S P + + ++ +HV SIA G H+ +T G LF
Sbjct: 399 SHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLF 435
Score = 53 (23.7 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 32/138 (23%), Positives = 56/138 (40%)
Query: 341 YTPRVVESLKGKDLVG-VAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVV 399
+T VVE + G ++ K T DG++ + K+ P ++ +
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGKLFT---WGDGDKGRLGHGNKEPKLVPTCVAALVEPNFC 532
Query: 400 SIAAGMVHSTALTEDGALFYWAS--------SDPDLRC-QQLYSMCGRNVVS-ISAGKYW 449
+A G + ALT G ++ S S D + ++ ++ V I+ G Y
Sbjct: 533 QVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYH 592
Query: 450 TAAVTATGDVYMWDGKKS 467
A +T+ +VY W GK S
Sbjct: 593 VAVLTSRTEVYTW-GKGS 609
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 310 (114.2 bits), Expect = 5.8e-24, Sum P(2) = 5.8e-24
Identities = 80/283 (28%), Positives = 140/283 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI---SAAKFHSVAVTSLGEVYTW 212
+V++ G G N +LG G H LP ++ L +V+K + S K H++A+T G+V++W
Sbjct: 3039 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGK-HALALTLDGKVFSW 3097
Query: 213 GYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG 272
G G G+LGH G + R+ L +++++ +A H+ + GE++TWG
Sbjct: 3098 GEGEDGKLGH-------GNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWG 3150
Query: 273 SNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTAVVSESGEVFTWGCNREGQ 329
G+LG+ TQ P+ V++L +++ VA ++ T ++E G VF+WG G+
Sbjct: 3151 LGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGK 3210
Query: 330 LGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN----LKKSGS 385
LG G S + TP +E L G +V + ++ L GE + L G
Sbjct: 3211 LGRGGSEGSD--TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD 3268
Query: 386 TPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYWASSD 424
++ + I V+ +A G +H A+T+ G ++ W +D
Sbjct: 3269 QHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3311
Score = 304 (112.1 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 94/332 (28%), Positives = 152/332 (45%)
Query: 154 ATEVFSWGSGANYQLG--TGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
A+ ++ WG QLG G+ PC+ SL V ++ + AVT G+++
Sbjct: 4048 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV--QLAGGEQSLFAVTPDGKLFA 4105
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
GYG GGRLG D A+ T + ++V + KH L TEG EV+ W
Sbjct: 4106 TGYGSGGRLGVGGSD----SWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG-EVYAW 4160
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
G +G+LG+ + + P+ V L + + +A + H+A ++ SG V TWG R G+L
Sbjct: 4161 GEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRL 4220
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNL 380
G+G +S P++VE+L G + +A T+ + DG+ + R
Sbjct: 4221 GHG--DSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4278
Query: 381 KKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD--------PD--LRCQ 430
P K L VV + G S ALT+ GA++ W D D R +
Sbjct: 4279 SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPK 4338
Query: 431 QLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
++ ++ G+ ++SI+ G A + +G+VY W
Sbjct: 4339 KVAALQGKKIISIATGSLHCVACSDSGEVYTW 4370
Score = 302 (111.4 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 78/267 (29%), Positives = 128/267 (47%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV++WG G + +LG GN P V+ L+G + I+ HS A+T+ G V TWG G
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4215
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK-TIAAAKHHTVLATEGGEVFTWGSN 274
R GRLGH D + + P+ V + LG R + + T+ T+ V++WG
Sbjct: 4216 RYGRLGHGDSEDQ------LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDG 4269
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+G
Sbjct: 4270 DYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4329
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN----LKKSGSTPLK 389
+ + P+ V +L+GK ++ +A H + GE N L T ++
Sbjct: 4330 SVDHVRR--PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4387
Query: 390 FHRKIKL----HVVSIAAGMVHSTALT 412
R + H+V + G H+ AL+
Sbjct: 4388 RPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 299 (110.3 bits), Expect = 8.7e-23, Sum P(2) = 8.7e-23
Identities = 83/280 (29%), Positives = 134/280 (47%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+VFSWG G + +LG GN P V++L I+ ++ HS A++S GE+YTWG G
Sbjct: 3093 KVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLG 3152
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
GRLGH D + P+ VT+ L RRV +A T+ TE G VF+WG
Sbjct: 3153 EYGRLGHGD------NTTQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG + TP + L + ++ + + + ++ +GEV+TWG +LG+
Sbjct: 3206 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3265
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSGSTPLKFH 391
G P+ + L+G+ ++ VA H + + G+ N + GS +
Sbjct: 3266 GGDQHVRK--PQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN 3323
Query: 392 RKIKLHVVSIAAGMVHSTALTEDGALFYW---ASSDPDLR 428
+K L V+ + A V+ A ++ + ASSD + R
Sbjct: 3324 KKPAL-VIGLDAVFVNRVACGSSHSIAWGLPNASSDEEKR 3362
Score = 259 (96.2 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 86/282 (30%), Positives = 131/282 (46%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V WG QLG K+P ++ I + +K + V+ G+VY G G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFI-VSQDGKVYACGEG 3046
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA--AAKHHTVLATEGGEVFTWGS 273
GRLG H+ V P ++ L VK +A + H + T G+VF+WG
Sbjct: 3047 TNGRLGLGV--THN----VPLPHQLPV-LRQYVVKKVAVHSGGKHALALTLDGKVFSWGE 3099
Query: 274 NREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + T PR V +L+ K I VA + H+A +S GE++TWG G+LG+
Sbjct: 3100 GEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGH 3159
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKY--HTIVL---GA-----DGERVIVARNLKK 382
G ++ + P++V +L G+ +V VA T+ L GA DG+ + R +
Sbjct: 3160 G--DNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSE 3217
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD 424
TP + R + VV I G S ALT G ++ W D
Sbjct: 3218 GSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGD 3259
Score = 253 (94.1 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 66/219 (30%), Positives = 109/219 (49%)
Query: 158 FSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG 217
+SWG+G +++LG G+ H + +P K+ +L ++ + +S A+T G + TWG G
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 697
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA--AAKHHTVLATEGGEVFTWGSNR 275
RLGH + D S V+ L V +A + H++ T G VF WG
Sbjct: 698 ARLGHGNSDDRSLPTLVVA-------LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGD 750
Query: 276 EGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG-T 334
G+LG + + P V SL ++ V A ++ + +S G+++TWG + LG+
Sbjct: 751 YGKLGNGNCNGSLQPILVESLP-RVQRVFAGSQFSVALSSEGQLYTWG--KATCLGHQLV 807
Query: 335 SNSASNYT-PRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
S + PR+V SL+ K +V VA + H + L + GE
Sbjct: 808 ERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGE 846
Score = 217 (81.4 bits), Expect = 9.7e-15, Sum P(4) = 9.7e-15
Identities = 73/228 (32%), Positives = 111/228 (48%)
Query: 147 GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSL--HGFVIKLISAAKFHSV 201
G Y++ T + +WG G +LG GN+ + LP V +L H V + + HS+
Sbjct: 676 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 735
Query: 202 AVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
A+TS G V+ WG G G+LG+ + + G + P V S RV+ + A +V
Sbjct: 736 ALTSEGLVFAWGDGDYGKLGNGNCN---GS---LQPILVES---LPRVQRVFAGSQFSVA 786
Query: 262 ATEGGEVFTWG-SNREG-QLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGE 318
+ G+++TWG + G QL SV PR VSSL+ K I+ VA + H +S SGE
Sbjct: 787 LSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGE 846
Query: 319 VFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
VF WG N Q+ + +S ++ SL G+A ++V
Sbjct: 847 VFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLV 894
Score = 202 (76.2 bits), Expect = 8.4e-11, Sum P(4) = 8.4e-11
Identities = 65/245 (26%), Positives = 112/245 (45%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H +A+ S Y+WG G RLGH D H+ AV P ++ + L V+++ +
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLGHGD--THA--RAV--PTKIAA-LEQHCVQSVYCGCSY 679
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKII---AVAAANKHTAVVSE 315
+ T GG + TWG +LG+ + D + P V +L ++ A+ + + H+ ++
Sbjct: 680 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTS 739
Query: 316 SGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE--- 372
G VF WG G+LG G N + P +VESL V A +++ ++ L ++G+
Sbjct: 740 EGLVFAWGDGDYGKLGNGNCNGSLQ--PILVESLPRVQRV-FAGSQF-SVALSSEGQLYT 795
Query: 373 --------RVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD 424
+V R+++ S P +V +A + H AL+ G +F W +D
Sbjct: 796 WGKATCLGHQLVERSVQGC-SVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRND 854
Query: 425 PDLRC 429
C
Sbjct: 855 SQQIC 859
Score = 186 (70.5 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 55/163 (33%), Positives = 86/163 (52%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGR 216
VF+WG G +LG GN + P V+SL V ++ + ++F SVA++S G++YTWG +
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILVESLPR-VQRVFAGSQF-SVALSSEGQLYTWG--K 798
Query: 217 GGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE 276
LGH + S Q + PR V+S L +R+ +A + H + + GEVF WG N
Sbjct: 799 ATCLGHQLVE-RSVQGCSV-PRLVSS-LQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDS 855
Query: 277 GQLGYTSVDTQP---TPRRVSSLKLKIIAVAAANKHTAVVSES 316
Q+ SV ++P TP VS +A + + V ++S
Sbjct: 856 QQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWTQS 898
Score = 156 (60.0 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 47/142 (33%), Positives = 71/142 (50%)
Query: 127 EDCKSRTPVDLLSG-PVLQV-VGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCK 181
+ CK ++ L+G V++V GS ++ T+ V++WG G ++LG G+ + P K
Sbjct: 4280 DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKK 4339
Query: 182 VDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
V +L G I I+ H VA + GEVYTWG G+LG D + A+ PR V
Sbjct: 4340 VAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG--DGTV----TAIQRPRLVA 4393
Query: 242 SGLGSRRVKTIAAAKHHTVLAT 263
+ G VK + H L+T
Sbjct: 4394 ALQGKHIVKVTCGSAHTLALST 4415
Score = 137 (53.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 43/138 (31%), Positives = 70/138 (50%)
Query: 131 SRTP--VDLLSG-PVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTG-NAHLQKLPCKV 182
S TP ++ LSG V+Q+ G+ ++ T EV++WG G Y+LG G + H++K P +
Sbjct: 3219 SDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRK-PQPI 3277
Query: 183 DSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTS 242
L G + ++ H +AVT G+VY WG G+ G + ++ A VI
Sbjct: 3278 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI------- 3330
Query: 243 GLGSRRVKTIAAAKHHTV 260
GL + V +A H++
Sbjct: 3331 GLDAVFVNRVACGSSHSI 3348
Score = 104 (41.7 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 46/175 (26%), Positives = 70/175 (40%)
Query: 344 RVVESLKG-KDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIA 402
RVV+ G +D +A + + DG+ + R + TP + R + VV I
Sbjct: 3178 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIE 3237
Query: 403 AGMVHSTALTEDGALFYWASSD---------PDLRC-QQLYSMCGRNVVSISAGKYWTAA 452
G S ALT G ++ W D +R Q + + GR V+ ++ G A
Sbjct: 3238 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 3297
Query: 453 VTATGDVYMWD----GKKSKDN------PPLVTRLHGIKKATSVSVGETHLLIVG 497
VT G VY W G++ N P LV L + V+ G +H + G
Sbjct: 3298 VTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF-VNRVACGSSHSIAWG 3351
Score = 80 (33.2 bits), Expect = 4.5e-16, Sum P(4) = 4.5e-16
Identities = 27/102 (26%), Positives = 43/102 (42%)
Query: 401 IAAGMVHSTALTEDGALFYWASSD----------PDLRCQQLYSMCGRNVVSISAGKY-- 448
+A G HS A++ G L+ W + L+ + + ++ GR VV ++ G
Sbjct: 3130 VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDA 3189
Query: 449 WTAAVTATGDVYMWD----------GKKSKDNPPLVTRLHGI 480
T A+T G V+ W G + D P + RL GI
Sbjct: 3190 QTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGI 3231
Score = 79 (32.9 bits), Expect = 5.7e-16, Sum P(4) = 5.7e-16
Identities = 30/118 (25%), Positives = 57/118 (48%)
Query: 392 RKIKLHVVSIAAGMVHSTALTEDGALFYWASS-DPDL---------RCQQLYSMCGRNVV 441
R+ + V++ +G H+ ALT DG +F W D L + + + ++ + +
Sbjct: 3069 RQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3128
Query: 442 SISAGKYWTAAVTATGDVYMWD-GKKSK----DN-----PPLVTRLHGIKKATSVSVG 489
++ G +AA+++ G++Y W G+ + DN P LVT L G ++ V+ G
Sbjct: 3129 DVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG-RRVVQVACG 3185
Score = 72 (30.4 bits), Expect = 5.8e-24, Sum P(2) = 5.8e-24
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 441 VSISAGKYWTAAVTATGDVYMW----DGK------KSKDNPPLVTRLHGIKKATSVSVGE 490
V++++G A+T G+VY W DGK S D P LV L+G+ A ++ G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVA-DIACGS 4197
Query: 491 THLLIVGSLYH 501
H + + H
Sbjct: 4198 AHSAAITASGH 4208
Score = 54 (24.1 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 30 DLCLAVREGS-LADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVP 78
D LA R+ S L + SALA + G ++ I+ L LH+ + Q P
Sbjct: 3784 DSRLAPRQPSVLLRLASALAACSQLGALTTAQRIWSLRKLHAVLLLEQAP 3833
Score = 43 (20.2 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 442 SISAGKYWTAAVTATGDVYMW 462
S S+ A+++TGDV+ W
Sbjct: 3895 SSSSSSAAPGAISSTGDVHKW 3915
Score = 42 (19.8 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 977 WAASGTPPSLSRPSLRNIQMQQGKQHCLS 1005
WA SL ++ + + G +HCL+
Sbjct: 4122 WAIPTLLGSLQHVFVKKVAVNSGGKHCLA 4150
Score = 42 (19.8 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 13/60 (21%), Positives = 27/60 (45%)
Query: 957 IPVVSARAQQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQQGKQHCLSHSPKTRTAGFS 1016
+P + RAQ T S P A+S ++ + ++ + G + L H+ + ++ S
Sbjct: 1014 LPTAAERAQTLTSLLPSEPGQASSAGHRFMTDLLVSSLMAEGGLESALQHAIRLESSSCS 1073
Score = 38 (18.4 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 794 SVSEVGSNAAKDFFDTEITEVSKKKEEDAMSEG 826
++++ G A D D + E S + DA++ G
Sbjct: 3474 TIAQGGGEAPADATDAGLQEHSPEAAVDALTGG 3506
Score = 37 (18.1 bits), Expect = 2.2e-18, Sum P(4) = 2.2e-18
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 535 ESNNMPSAIDKDDSGVRLAPSLKSLCENVAAQCLVEPRNALQLLEISDSLG 585
ES++ P + + +GV P + L +QC E RN L I D G
Sbjct: 3661 ESSH-PYVDNVNVTGVVRIPGAEMLRLEFDSQCSTEKRN--DPLVIMDGTG 3708
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 297 (109.6 bits), Expect = 9.6e-24, Sum P(2) = 9.6e-24
Identities = 90/283 (31%), Positives = 137/283 (48%)
Query: 150 YNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF-HSVAVTSLGE 208
Y + + EVF +G + LGTG+ H +P K+++L G IK +S H + T G
Sbjct: 36 YVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGV 95
Query: 209 VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEV 268
VY WG+ +LG+ + Q + P +V + L ++V +A HH++ GEV
Sbjct: 96 VYAWGHNGYSQLGNGT----TNQG--LAPIQVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAAANKHTAVVSESGEVFTWGCNR 326
F WG N GQ+G S QPTPR+V++ L +K ++ +A + V ++GEV+ WG N
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNG 209
Query: 327 EGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGST 386
GQLG G N+ + TP V +L + + HT+ L +G N T
Sbjct: 210 NGQLGLG--NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 387 PLK------FHRKI-KLHVVSIAA-GMVH-STALTEDGALFYW 420
K H + K V+ IAA H S A T+ G ++ W
Sbjct: 268 GNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMW 310
Score = 243 (90.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 82/283 (28%), Positives = 141/283 (49%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA-AAKHHTVL 261
VT EV+ +G LG D HS + P+++ + G +++K+++ + H +L
Sbjct: 37 VTDSDEVFVFGLNYSSCLGTGDN--HS----TLVPKKLEALCG-KKIKSLSYGSGPHVLL 89
Query: 262 ATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV-SSLKLK-IIAVAAANKHTAVVSESGEV 319
+TE G V+ WG N QLG + + P +V ++L +K ++ VA + H+ ++ GEV
Sbjct: 90 STEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 320 FTWGCNREGQLGYGTSNSASNYTPR-VVESLKGKDLVGVAAAKYHTIVLGADGERVIVAR 378
F WG N GQ+G G++ A+ TPR V L K +VG+A + ++ + +GE
Sbjct: 150 FAWGYNNCGQVGSGST--ANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 379 N------LKKSGS--TPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASS------- 423
N L +G+ TP++ + V I G H+ ALT++G L+ W ++
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 424 -DPDLRCQQLYSMCGRN-VVSISA--GKYWTAAVTATGDVYMW 462
+ + + M + V+ I+A + +AA T G VYMW
Sbjct: 268 GNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMW 310
Score = 227 (85.0 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 69/201 (34%), Positives = 105/201 (52%)
Query: 136 DLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVI 190
+LL V++V ++S+A EVF+WG Q+G+G+ Q P KV + LH +
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
I+ + S+AV GEVY WGY G+LG + +G +TP RV + L S V
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN----NGNQ--LTPVRVAA-LHSVCVN 236
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANK-H 309
I HT+ T+ G ++ WG+N GQLG + + +P + K ++I +AA + H
Sbjct: 237 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAH 296
Query: 310 T-AVVSESGEVFTWGCNREGQ 329
T A ++ G V+ WG R GQ
Sbjct: 297 TSAAKTQGGHVYMWGQCR-GQ 316
Score = 180 (68.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 59/200 (29%), Positives = 95/200 (47%)
Query: 234 VITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV 293
+++P + S R+ + + + T+ EVF +G N LG + P+++
Sbjct: 12 LLSPHEIAS---IRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKL 68
Query: 294 SSL---KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTP-RVVESL 349
+L K+K ++ + H + +E G V+ WG N QLG GT+N P +V +L
Sbjct: 69 EALCGKKIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG--LAPIQVCTNL 125
Query: 350 KGKDLVGVAAAKYHTIVLGADGERVIVARN---LKKSGSTPLK-FHRKIK--LH---VVS 400
K +V VA +H++ L ADGE N SGST + RK+ LH VV
Sbjct: 126 LIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVG 185
Query: 401 IAAGMVHSTALTEDGALFYW 420
IA G S A+ ++G ++ W
Sbjct: 186 IACGQTSSMAVLDNGEVYGW 205
Score = 54 (24.1 bits), Expect = 9.6e-24, Sum P(2) = 9.6e-24
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 556 LKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNL 601
LK LC+++ + + NA L + A+DL++ C I +L
Sbjct: 455 LKKLCQHIIKRGITV-ENAFSLFSAAVRYDAEDLEEFCFKFCINHL 499
Score = 53 (23.7 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 571 PRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFASASLDILA-DLEK 625
P +A+ LL+++ S + LKK C+ I R I ++ S SA++ A DLE+
Sbjct: 437 PEDAIGLLDLATSYCENRLKKLCQHIIKRG---ITVENAFSLFSAAVRYDAEDLEE 489
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 310 (114.2 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 101/295 (34%), Positives = 144/295 (48%)
Query: 187 GFVIKLISAA--KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
G +KL+ AA + HS+ + S VY+ G G+LG S Q+ P L
Sbjct: 25 GTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-----SPQSTK-RPEEPIQAL 78
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLK-LKIIA 302
+ + ++ K H+V G VFTWG+ EGQLG S + P +++SL +KII
Sbjct: 79 STVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQ 138
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKY 362
V+ + H+ +SE G+VF+WG NR+GQLG G +N S +P+ V+SL+G L VAA
Sbjct: 139 VSCGHYHSLALSEDGQVFSWGSNRQGQLGLG-NNLCSQASPQKVKSLEGIPLAQVAAGGT 197
Query: 363 HTIVLGADGERVIVARN----LKKSGSTP-----LKFHR--KIK-LHVVSIAAGMVHSTA 410
H+ L G N L SG++ K H +K L+VV I+ G H++
Sbjct: 198 HSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSV 257
Query: 411 LTEDGALF-YWASSDPDLRCQ--------QLYSMCGRNVVSISAGKYWTAAVTAT 456
LTEDG +F + SS L+ QL G +V I G Y T A T
Sbjct: 258 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYT 312
Score = 283 (104.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 76/257 (29%), Positives = 132/257 (51%)
Query: 134 PVDLLSGPVLQVVGSGY-NSVAT----EVFSWGSGANYQLGTGNA-HLQKLPCKVDSLHG 187
P+ LS + +V G +SVA VF+WG+G+ QLG G + + +P K++SL G
Sbjct: 74 PIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAG 133
Query: 188 FVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
I +S +HS+A++ G+V++WG R G+LG + + + +P++V S G
Sbjct: 134 IKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLG-----LGNNLCSQASPQKVKSLEGIP 188
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT----PRRVSSLK-LKIIA 302
+ A H L+ G F WG+NR GQL + + P + +LK L ++
Sbjct: 189 LAQVAAGGTHSFALSLMGTS-FGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVY 247
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKY 362
++ +HT+V++E G+VFT+G + QL + + P+++E + G + + Y
Sbjct: 248 ISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG--PQLIEGIGGH-VSQIECGSY 304
Query: 363 HTIV-LGADGERVIVAR 378
HTI + G+ V + R
Sbjct: 305 HTIAYVYTTGQVVSLGR 321
Score = 237 (88.5 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 62/199 (31%), Positives = 96/199 (48%)
Query: 237 PRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR-VSS 295
PRR+ +G G + +K A+ + H++L V++ G N GQLG S + P + +
Sbjct: 19 PRRLEAGTGLKLLKA-ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQA 77
Query: 296 LK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL 354
L + I V+ +H+ V G VFTWG EGQLG G S S + P + SL G +
Sbjct: 78 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKINSLAGIKI 136
Query: 355 VGVAAAKYHTIVLGADGE----------RVIVARNLKKSGSTPLKFHRKIKLHVVSIAAG 404
+ V+ YH++ L DG+ ++ + NL S P K + + +AAG
Sbjct: 137 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQAS-PQKVKSLEGIPLAQVAAG 195
Query: 405 MVHSTALTEDGALFYWASS 423
HS AL+ G F W ++
Sbjct: 196 GTHSFALSLMGTSFGWGNN 214
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 297 (109.6 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 80/244 (32%), Positives = 120/244 (49%)
Query: 118 LQSGASITLEDCKSRT--PVDL--LSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLG 169
L + + D KS P+++ L +L + Y+S A E++ WG ++ QLG
Sbjct: 108 LNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLG 167
Query: 170 TGN--AHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPD--- 224
G A + ++P KV++LHG I+ ++ HSVAVT GEV +WG G GRLGH
Sbjct: 168 LGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSS 227
Query: 225 -FDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTS 283
F I + TPR + L +V +AA H+ E G F +G ++G+
Sbjct: 228 LFGILRSNSE-FTPRLIKE-LEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGG 285
Query: 284 VDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTP 343
V TP +S + VA HT VV+ GE++TWG N G LG T ++ +++P
Sbjct: 286 VRNATTPSIISEVPYAE-EVACGGYHTCVVTRGGELYTWGSNENGCLG--TDSTYVSHSP 342
Query: 344 RVVE 347
VE
Sbjct: 343 VRVE 346
Score = 287 (106.1 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 87/317 (27%), Positives = 147/317 (46%)
Query: 128 DCKSRTPVDLLSGPVLQVVGSGYNSVATEVFS--WGSGANYQLGTGNAHLQKLPCKVDSL 185
+C S D GP+ +S + + F+ WGSG +LG GN Q P +L
Sbjct: 20 NCTSGLLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSAL 79
Query: 186 HGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLG 245
I ++ H++ +T V+ G G+LG D H+ + P V SGL
Sbjct: 80 SDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHA-----MDPLEV-SGL- 132
Query: 246 SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY--TSVDTQPTPRRVSSLK-LKIIA 302
+ + I+A +H+ T GE++ WG N GQLG + P +V +L + I +
Sbjct: 133 DKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQS 192
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSA-------SNYTPRVVESLKGKDLV 355
VA ++H+ V++ GEV +WG G+LG+G +S S +TPR+++ L+G +
Sbjct: 193 VALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVT 252
Query: 356 GVAAAKYHTIVLGADGERVIVA-RNLKKSG-------STPLKFHRKIKLHVVSIAAGMVH 407
VAA H+ +G + +++ K G +TP ++ + +A G H
Sbjct: 253 NVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTP-SIISEVP-YAEEVACGGYH 310
Query: 408 STALTEDGALFYWASSD 424
+ +T G L+ W S++
Sbjct: 311 TCVVTRGGELYTWGSNE 327
Score = 201 (75.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 73/260 (28%), Positives = 112/260 (43%)
Query: 133 TPVDLLSGPVLQVVGSGY-NSVAT----EVFSWGSGANYQLGTGN---------AHLQKL 178
T V+ L G +Q V G +SVA EV SWG G + +LG G+ ++ +
Sbjct: 180 TKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFT 239
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P + L G + ++A HS G + +G ++G G TP
Sbjct: 240 PRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGF------GGVRNATTPS 293
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS--L 296
++ + +A +HT + T GGE++TWGSN G LG S +P RV L
Sbjct: 294 IISE---VPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFL 350
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNRE------------GQLGYGTSNSASNYTPR 344
+ + V+ KHTA +S++ VFTWG GQLG+G+ + P
Sbjct: 351 ESTVSQVSCGWKHTAAISDNN-VFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYAR--PA 407
Query: 345 VVESLKGKDLVGVAAAKYHT 364
+V+ K V ++ HT
Sbjct: 408 MVDLGKNVRAVHISCGFNHT 427
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 308 (113.5 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 73/221 (33%), Positives = 118/221 (53%)
Query: 156 EVFSWGSGANYQLGTGNAHLQ-KLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
+V S G QLG A +L ++ +L + L+S K HS+AV G V+ WG
Sbjct: 43 QVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGA 102
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G G+LG +F + + P ++ + L ++K ++ +H++ +EGG+VF+WGSN
Sbjct: 103 GSEGQLGTGEF-----KETNLIPMKIKT-LNDIKIKQVSCGHYHSLALSEGGQVFSWGSN 156
Query: 275 REGQLGY-TSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+GQLG +Q +P+RV SL + + VAA H+ +S SG F WG N GQL
Sbjct: 157 SDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLAL 216
Query: 333 GTSN-SASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
+N S +Y P + +LK ++ ++ HT+VL +G+
Sbjct: 217 HKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGK 257
Score = 288 (106.4 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 74/215 (34%), Positives = 118/215 (54%)
Query: 157 VFSWGSGANYQLGTGN-AHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
VF+WG+G+ QLGTG +P K+ +L+ IK +S +HS+A++ G+V++WG
Sbjct: 97 VFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSN 156
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
G+LG + + +P+RV S L + +AA H+ + G F WG N
Sbjct: 157 SDGQLG-----LGKKFPSQASPQRVRS-LDGIPLAQVAAGGAHSFALSLSGTSFGWGRNN 210
Query: 276 EGQLGY--TSVDTQP-TPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
GQL +V Q P +S+LK L +I ++ +HT V++++G+VFT+G N GQLG
Sbjct: 211 AGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLG 270
Query: 332 YGTSNSASNYTPRVVESLKGKDLVG-VAAAKYHTI 365
+ S +A P++VE + G LV + YHT+
Sbjct: 271 H--SPTAEKSGPQLVEGIDG--LVSQIDCGSYHTL 301
Score = 257 (95.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 90/311 (28%), Positives = 138/311 (44%)
Query: 185 LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
L G ++ ++ + HS+ + S G+V++ G G+LG + R+ + L
Sbjct: 20 LGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQ-----RGAPCSAQLKERIRA-L 73
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV-DTQPTPRRVSSLK-LKIIA 302
+ V ++ K H++ G VF WG+ EGQLG +T P ++ +L +KI
Sbjct: 74 ETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQ 133
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKY 362
V+ + H+ +SE G+VF+WG N +GQLG G S +P+ V SL G L VAA
Sbjct: 134 VSCGHYHSLALSEGGQVFSWGSNSDGQLGLG-KKFPSQASPQRVRSLDGIPLAQVAAGGA 192
Query: 363 HTIVLGADGERVIVARN------LKK---SGST--PLKFHRKIKLHVVSIAAGMVHSTAL 411
H+ L G RN L K SG + P L V+ I+ G H+ L
Sbjct: 193 HSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVL 252
Query: 412 TEDGALFYWASS-------DPDLRCQ--QLYSMCGRNVVSISAGKYWTAA-VTATGDVYM 461
T++G +F + + P QL V I G Y T A V TG V
Sbjct: 253 TQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVS 312
Query: 462 WDGKKS-KDNP 471
+ + + K +P
Sbjct: 313 FGREPTCKSSP 323
Score = 212 (79.7 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 61/188 (32%), Positives = 97/188 (51%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAH-LQKLPCKVDSLHGFVIKLISAA 196
+ QV Y+S+A +VFSWGS ++ QLG G Q P +V SL G + ++A
Sbjct: 131 IKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAG 190
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
HS A++ G + WG G+L ++ SGQ+ P + S L + V I+
Sbjct: 191 GAHSFALSLSGTSFGWGRNNAGQLALHKNNV-SGQS--YKPYSI-SALKNLGVIYISCGY 246
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHT-AVVSE 315
HTV+ T+ G+VFT+G N GQLG++ + P+ V + + + + HT A V
Sbjct: 247 EHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYHTLAYVYT 306
Query: 316 SGEVFTWG 323
+G+V ++G
Sbjct: 307 TGKVVSFG 314
Score = 209 (78.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 67/243 (27%), Positives = 109/243 (44%)
Query: 230 GQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVD-TQP 288
G ++ RRV GLG ++ A+ + H++L G+V + G N GQLG +
Sbjct: 8 GPRGPVSRRRV--GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQ 65
Query: 289 TPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE 347
R+ +L+ L + V+ +H+ V G VF WG EGQLG G +N P ++
Sbjct: 66 LKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKE-TNLIPMKIK 124
Query: 348 SLKGKDLVGVAAAKYHTIVLGADGERVIVARNL-------KK--SGSTPLKFHRKIKLHV 398
+L + V+ YH++ L G+ N KK S ++P + + +
Sbjct: 125 TLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPL 184
Query: 399 VSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGD 458
+AAG HS AL+ G F W ++ QL ++ NV S Y +A+ G
Sbjct: 185 AQVAAGGAHSFALSLSGTSFGWGRNNAG----QL-ALHKNNVSGQSYKPYSISALKNLGV 239
Query: 459 VYM 461
+Y+
Sbjct: 240 IYI 242
Score = 128 (50.1 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 51/194 (26%), Positives = 89/194 (45%)
Query: 291 RRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY-GTSNSAS-NYTPRVVES 348
RRV +++ A+ +H+ ++ +G+V + G N GQLG G SA R +E+
Sbjct: 16 RRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALET 75
Query: 349 LKGKDLVGVAAAKYHTIVL---------GADGERVIVARNLKKSGSTPLKFHRKIKLHVV 399
L DLV + K H++ + GA E + K++ P+K + +
Sbjct: 76 LH-VDLV--SCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIK 132
Query: 400 SIAAGMVHSTALTEDGALFYWAS-SDPDLRC----------QQLYSMCGRNVVSISAGKY 448
++ G HS AL+E G +F W S SD L Q++ S+ G + ++AG
Sbjct: 133 QVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGA 192
Query: 449 WTAAVTATGDVYMW 462
+ A++ +G + W
Sbjct: 193 HSFALSLSGTSFGW 206
Score = 49 (22.3 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 506 PNVAKNPQKLKLNGRNDLEEFYEDFMFNDESNNM 539
P + KN Q++ N +D EE Y F + NN+
Sbjct: 798 PLLGKNLQEILDNEADDTEELYIYFSIYWDKNNV 831
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 292 (107.8 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 90/277 (32%), Positives = 133/277 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF-HSVAVTSLGEVYTWGY 214
EVF +G + LGTG+ +P K+++L G IK +S H + T G VY WG+
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGH 101
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
+LG+ + Q I P +V + L ++V +A HH++ GE+F WG N
Sbjct: 102 NGYSQLGNGT----TNQG--IAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYN 155
Query: 275 REGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
GQ+G S QPTPR+V++ L K ++ +A + V +SGEV+ WG N GQLG
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 215
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN----LKKSGSTPL 388
G N+ + TP V +L G + + HT+ L +G N L L
Sbjct: 216 G--NNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNL 273
Query: 389 KFHRKI---KLHVVSIAA-GMVH-STALTEDGALFYW 420
+I K V+ IAA H S A T+ G ++ W
Sbjct: 274 LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMW 310
Score = 235 (87.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 81/286 (28%), Positives = 139/286 (48%)
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA-AAKHH 258
++ VT EV+ +G LG D Q+ ++ P+++ + G +++K+++ + H
Sbjct: 34 AIYVTDNDEVFVFGLNYSNCLGTGD-----NQSTLV-PKKLEALCG-KKIKSLSYGSGPH 86
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV-SSLKLK-IIAVAAANKHTAVVSES 316
+L TE G V+ WG N QLG + + P +V ++L +K +I VA + H+ ++
Sbjct: 87 VLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAAD 146
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPR-VVESLKGKDLVGVAAAKYHTIVLGADGERVI 375
GE+F WG N GQ+G G++ A+ TPR V L K +V +A + ++ + GE
Sbjct: 147 GELFAWGYNNCGQVGSGST--ANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYG 204
Query: 376 VARN------LKKSGS--TPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWAS----- 422
N L +G+ TP++ + V I G H+ ALT++G L+ W +
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 423 ----SDPDLRCQQLYSMCGRNVVSISA--GKYWTAAVTATGDVYMW 462
S +L + V+ I+A + +AA T G VYMW
Sbjct: 265 LGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMW 310
Score = 231 (86.4 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 68/201 (33%), Positives = 105/201 (52%)
Query: 136 DLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVI 190
+LL V++V ++S+A E+F+WG Q+G+G+ Q P KV + LH +
Sbjct: 124 NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRV 183
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
I+ + S+AV GEVY WGY G+LG + +G +TP RV + L V
Sbjct: 184 VNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN----NGNQ--LTPVRVAA-LHGMCVN 236
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANK-H 309
I HT+ T+ G ++ WG+N GQLG S + +P ++ K ++I +AA + H
Sbjct: 237 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTH 296
Query: 310 T-AVVSESGEVFTWGCNREGQ 329
T A ++ G V+ WG R GQ
Sbjct: 297 TSAAKTQGGHVYMWGQCR-GQ 316
Score = 184 (69.8 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 62/192 (32%), Positives = 94/192 (48%)
Query: 245 GS-RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT--PRRVSSL---KL 298
GS R+ + + + T+ EVF +G N LG T D Q T P+++ +L K+
Sbjct: 19 GSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLG-TG-DNQSTLVPKKLEALCGKKI 76
Query: 299 KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTP-RVVESLKGKDLVGV 357
K ++ + H + +E G V+ WG N QLG GT+N P +V +L K ++ V
Sbjct: 77 KSLSYGSG-PHVLLTTEDGVVYAWGHNGYSQLGNGTTNQG--IAPVQVCTNLLIKQVIEV 133
Query: 358 AAAKYHTIVLGADGERVIVARN---LKKSGSTPLK-FHRKIK--LH---VVSIAAGMVHS 408
A +H++ L ADGE N SGST + RK+ LH VV+IA G S
Sbjct: 134 ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSS 193
Query: 409 TALTEDGALFYW 420
A+ + G ++ W
Sbjct: 194 MAVLDSGEVYGW 205
Score = 53 (23.7 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 556 LKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNL 601
LK LC+++ + + NA L + A+DL++ C I +L
Sbjct: 455 LKRLCQHIIKRGITV-ENAFSLFSAAVRYDAEDLEEFCFKFCINHL 499
Score = 50 (22.7 bits), Expect = 9.5e-23, Sum P(2) = 9.5e-23
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 571 PRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFASASLDILA-DLEK 625
P +A+ LL+++ S + LK+ C+ I R I ++ S SA++ A DLE+
Sbjct: 437 PEDAIGLLDLATSYCENRLKRLCQHIIKRG---ITVENAFSLFSAAVRYDAEDLEE 489
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 292 (107.8 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 90/283 (31%), Positives = 135/283 (47%)
Query: 150 YNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF-HSVAVTSLGE 208
Y + + EVF +G + LGTG+ +P K+++L G IK +S H + T G
Sbjct: 36 YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGV 95
Query: 209 VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEV 268
VY WG+ +LG+ + Q I P +V + L ++V +A HH++ GE+
Sbjct: 96 VYAWGHNGYSQLGNGT----TNQG--IAPIQVCTNLLVKQVVEVACGSHHSMALAADGEL 149
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSSL--KLKIIAVAAANKHTAVVSESGEVFTWGCNR 326
F WG N GQ+G S QPTPR+V++ K++ +A + V +SGEV+ WG N
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNG 209
Query: 327 EGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN----LKK 382
GQLG G N+ + TP V +L G + + HT+ L +G N L
Sbjct: 210 NGQLGLG--NNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 383 SGSTPLKFHRKI---KLHVVSIAA-GMVH-STALTEDGALFYW 420
L +I K V+ IAA H S A T+ G ++ W
Sbjct: 268 GSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMW 310
Score = 242 (90.2 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 86/307 (28%), Positives = 150/307 (48%)
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P + S+ + ISA++ ++ VT EV+ +G LG D Q+ ++ P+
Sbjct: 15 PQETGSIRKACVFGISASE--AIYVTDSDEVFVFGLNYSNCLGTGD-----NQSTLV-PK 66
Query: 239 RVTSGLGSRRVKTIA-AAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV-SSL 296
++ + G +R+K+++ + H +L+TE G V+ WG N QLG + + P +V ++L
Sbjct: 67 KLEALCG-KRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNL 125
Query: 297 KLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPR-VVESLKGKDL 354
+K ++ VA + H+ ++ GE+F WG N GQ+G G++ A+ TPR V L K +
Sbjct: 126 LVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGST--ANQPTPRKVTNCLHTKKV 183
Query: 355 VGVAAAKYHTIVLGADGERVIVARN------LKKSGS--TPLKFHRKIKLHVVSIAAGMV 406
V +A + ++ + GE N L +G+ TP++ + V I G
Sbjct: 184 VNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYA 243
Query: 407 HSTALTEDGALFYWAS---------SDPDLRCQQLYSMCGRNVVSISA--GKYWTAAVTA 455
H+ ALT++G L+ W + S +L + V+ I+A + +AA T
Sbjct: 244 HTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQ 303
Query: 456 TGDVYMW 462
G VYMW
Sbjct: 304 GGHVYMW 310
Score = 229 (85.7 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 68/201 (33%), Positives = 105/201 (52%)
Query: 136 DLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVI 190
+LL V++V ++S+A E+F+WG Q+G+G+ Q P KV + LH +
Sbjct: 124 NLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKV 183
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
I+ + S+AV GEVY WGY G+LG + +G +TP RV + L V
Sbjct: 184 VNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN----NGNQ--LTPVRVAA-LHGVCVN 236
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANK-H 309
I HT+ T+ G ++ WG+N GQLG S + +P ++ K ++I +AA + H
Sbjct: 237 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTH 296
Query: 310 T-AVVSESGEVFTWGCNREGQ 329
T A ++ G V+ WG R GQ
Sbjct: 297 TSAAKTQGGHVYMWGQCR-GQ 316
Score = 53 (23.7 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 556 LKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNL 601
LK LC+++ + + NA L + A+DL++ C I +L
Sbjct: 455 LKRLCQHIIKRGITV-ENAFSLFSAAVRYDAEDLEEFCFKFCINHL 499
Score = 50 (22.7 bits), Expect = 9.5e-23, Sum P(2) = 9.5e-23
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 571 PRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFASASLDILA-DLEK 625
P +A+ LL+++ S + LK+ C+ I R I ++ S SA++ A DLE+
Sbjct: 437 PEDAIGLLDLATSYCENRLKRLCQHIIKRG---ITVENAFSLFSAAVRYDAEDLEE 489
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 291 (107.5 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 90/277 (32%), Positives = 134/277 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF-HSVAVTSLGEVYTWGY 214
EVF +G + LGTG+ +P K+++L G IK +S H + T G VY WG+
Sbjct: 71 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGH 130
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
+LG+ + Q I P +V + L ++V +A HH++ GEVF WG N
Sbjct: 131 NGYSQLGNGT----TNQG--IAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 184
Query: 275 REGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
GQ+G S QPTPR+V++ L +K ++++A + V ++GEV+ WG N GQLG
Sbjct: 185 NCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 244
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLK--- 389
G N+ + TP V +L + + HT+ L +G N T K
Sbjct: 245 G--NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNL 302
Query: 390 ---FHRKI-KLHVVSIAA-GMVH-STALTEDGALFYW 420
H + K VV IAA H S A T+ G ++ W
Sbjct: 303 LSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMW 339
Score = 236 (88.1 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 81/283 (28%), Positives = 141/283 (49%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA-AAKHHTVL 261
VT EV+ +G LG D Q+ ++ P+++ + G +++K+++ + H +L
Sbjct: 66 VTDNDEVFVFGLNYSNCLGTGD-----NQSTLV-PKKLEALCG-KKIKSLSYGSGPHVLL 118
Query: 262 ATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV-SSLKLK-IIAVAAANKHTAVVSESGEV 319
+TE G V+ WG N QLG + + P +V ++L +K ++ VA + H+ ++ GEV
Sbjct: 119 STEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEV 178
Query: 320 FTWGCNREGQLGYGTSNSASNYTPR-VVESLKGKDLVGVAAAKYHTIVLGADGERVIVAR 378
F WG N GQ+G G++ A+ TPR V L K +V +A + ++ + +GE
Sbjct: 179 FAWGYNNCGQVGSGST--ANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY 236
Query: 379 N------LKKSGS--TPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASS------- 423
N L +G+ TP++ + V I G H+ ALT++G L+ W ++
Sbjct: 237 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 296
Query: 424 -DPDLRCQQLYSMCGRN-VVSISA--GKYWTAAVTATGDVYMW 462
+ + + M + VV I+A + +AA T G VYMW
Sbjct: 297 GNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMW 339
Score = 228 (85.3 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 68/201 (33%), Positives = 105/201 (52%)
Query: 136 DLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVI 190
+LL V++V ++S+A EVF+WG Q+G+G+ Q P KV + LH +
Sbjct: 153 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 212
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
I+ + S+AV GEVY WGY G+LG + +G +TP RV + L S V
Sbjct: 213 VSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN----NGNQ--LTPVRVAA-LHSVCVN 265
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANK-H 309
I HT+ T+ G ++ WG+N GQLG + + +P + K +++ +AA + H
Sbjct: 266 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAH 325
Query: 310 T-AVVSESGEVFTWGCNREGQ 329
T A ++ G V+ WG R GQ
Sbjct: 326 TSAAKTQGGHVYMWGQCR-GQ 345
Score = 187 (70.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 64/202 (31%), Positives = 100/202 (49%)
Query: 234 VITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT--PR 291
+++P+ + S R+ + + + T+ EVF +G N LG T D Q T P+
Sbjct: 41 LLSPQEIAS---IRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLG-TG-DNQSTLVPK 95
Query: 292 RVSSL---KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTP-RVVE 347
++ +L K+K ++ + H + +E G V+ WG N QLG GT+N P +V
Sbjct: 96 KLEALCGKKIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG--IAPIQVCT 152
Query: 348 SLKGKDLVGVAAAKYHTIVLGADGERVIVARN---LKKSGSTPLK-FHRKIK--LH---V 398
+L K +V VA +H++ L ADGE N SGST + RK+ LH V
Sbjct: 153 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 212
Query: 399 VSIAAGMVHSTALTEDGALFYW 420
VSIA G S A+ ++G ++ W
Sbjct: 213 VSIACGQTSSMAVLDNGEVYGW 234
Score = 54 (24.1 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 556 LKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNL 601
LK LC+++ + + NA L + A+DL++ C I +L
Sbjct: 484 LKKLCQHIIKRGITV-ENAFSLFSAAVRYDAEDLEEFCFKFCINHL 528
Score = 53 (23.7 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 571 PRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFASASLDILA-DLEK 625
P +A+ LL+++ S + LKK C+ I R I ++ S SA++ A DLE+
Sbjct: 466 PEDAIGLLDLATSYCENRLKKLCQHIIKRG---ITVENAFSLFSAAVRYDAEDLEE 518
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 289 (106.8 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 90/277 (32%), Positives = 132/277 (47%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF-HSVAVTSLGEVYTWGY 214
EVF +G + LGTG+ +P K++ L G IK +S H + T G VY WG+
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGH 101
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
+LG+ + Q I P +V + L ++V +A HH++ GEVF WG N
Sbjct: 102 NGYSQLGNGT----TNQG--IAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 275 REGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
GQ+G S QPTPR+V++ L +K ++ +A + V ++GEV+ WG N GQLG
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLK--- 389
G N+ + TP V +L + + HT+ L +G N T K
Sbjct: 216 G--NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNL 273
Query: 390 ---FHRKI-KLHVVSIAA-GMVH-STALTEDGALFYW 420
H + K VV IAA H S A T+ G ++ W
Sbjct: 274 LSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMW 310
Score = 249 (92.7 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 87/307 (28%), Positives = 154/307 (50%)
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P ++ S+ + SA++ ++ VT EV+ +G LG D Q+ ++ P+
Sbjct: 15 PQEIASIRKACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-----NQSTLV-PK 66
Query: 239 RVTSGLGSRRVKTIA-AAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV-SSL 296
++ GL +++K+++ + H +L+TE G V+ WG N QLG + + P +V ++L
Sbjct: 67 KL-EGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNL 125
Query: 297 KLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPR-VVESLKGKDL 354
+K ++ VA + H+ ++ GEVF WG N GQ+G G++ A+ TPR V L K +
Sbjct: 126 LIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGST--ANQPTPRKVTNCLHIKRV 183
Query: 355 VGVAAAKYHTIVLGADGERVIVARN------LKKSGS--TPLKFHRKIKLHVVSIAAGMV 406
VG+A + ++ + +GE N L +G+ TP++ + V I G
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYA 243
Query: 407 HSTALTEDGALFYWASS--------DPDLRCQQLYSMCGRN-VVSISA--GKYWTAAVTA 455
H+ ALT++G L+ W ++ + + + M + VV I+A + +AA T
Sbjct: 244 HTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQ 303
Query: 456 TGDVYMW 462
G VYMW
Sbjct: 304 GGHVYMW 310
Score = 226 (84.6 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 68/201 (33%), Positives = 105/201 (52%)
Query: 136 DLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVI 190
+LL V++V ++S+A EVF+WG Q+G+G+ Q P KV + LH +
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
I+ + S+AV GEVY WGY G+LG + +G +TP RV + L S V
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN----NGNQ--LTPVRVAA-LHSVCVN 236
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANK-H 309
I HT+ T+ G ++ WG+N GQLG + + +P + K +++ +AA + H
Sbjct: 237 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAH 296
Query: 310 T-AVVSESGEVFTWGCNREGQ 329
T A ++ G V+ WG R GQ
Sbjct: 297 TSAAKTQGGHVYMWGQCR-GQ 316
Score = 54 (24.1 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 556 LKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNL 601
LK LC+++ + + NA L + A+DL++ C I +L
Sbjct: 455 LKKLCQHIIKRGITV-ENAFSLFSAAVRYDAEDLEEFCFKFCINHL 499
Score = 53 (23.7 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 571 PRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFASASLDILA-DLEK 625
P +A+ LL+++ S + LKK C+ I R I ++ S SA++ A DLE+
Sbjct: 437 PEDAIGLLDLATSYCENRLKKLCQHIIKRG---ITVENAFSLFSAAVRYDAEDLEE 489
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 303 (111.7 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 89/280 (31%), Positives = 140/280 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
EVFSWG G +LG GN+ QK P + L G V+ +SA HS AVT GE+YTWG
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGE 537
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGS 273
G GRLGH D S + T + S +G ++ HT+ L+ +G V+++G
Sbjct: 538 GDFGRLGHGD----SNSRNIPTLVKDISNVGE-----VSCGSSHTIALSKDGRTVWSFGG 588
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG+ + P+ + +L+ + I V A ++ + ++ +G+V+ WGC LG
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC 646
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSG---ST-P 387
G+S A+ P+++E L +V ++ H + L D E N + + G ST P
Sbjct: 647 GSSE-ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGP 705
Query: 388 LKFHRKIK----LHVVSIAAGMVHS---TALTEDGALFYW 420
+ +K+ + + I+AG HS TAL D + W
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 289 (106.8 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 99/338 (29%), Positives = 155/338 (45%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S EV+ WGS +++QL G P S + I A ++ + +++ G V
Sbjct: 369 SETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVISTDGSVRA 426
Query: 212 WGYGRGGRLGHPDFDIHSG-QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
G G GRLG D + S + P R ++V + + HT+ T GEVF+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHR-----SIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 271 WGSNREGQLGYTSVDTQPTPRRVSS-LKLKIIA-VAAANKHTAVVSESGEVFTWGCNREG 328
WG G+LG+ + TQ P+ + L+ K++ V+A +H+A V+E GE++TWG G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVG-VAAAKYHTIVLGADGERVIV---ARNLKKS- 383
+LG+G SNS + P +V+ + VG V+ HTI L DG V N K
Sbjct: 542 RLGHGDSNSRN--IPTLVKDISN---VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Query: 384 GSTPLKFHRKI-----KLHVVSIAAGMVHSTALTEDGALFYWA--------SSDPD-LRC 429
G T + K+ + + + AG S ALT G ++ W SS+ LR
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKS 467
+ + + +V IS G +++ +VY W G S
Sbjct: 657 KLIEELAATRIVDISIGDSHCLSLSHDNEVYAW-GNNS 693
Score = 262 (97.3 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 77/282 (27%), Positives = 138/282 (48%)
Query: 161 GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF---HSVAVTSLGEVYTWGYGRG 217
G G+ +LG G+++ Q K+ IK +S++K H++A T+ GEV++WG G
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
G+LGH + S Q P+ + L + V ++A H+ TE GE++TWG G
Sbjct: 488 GKLGHGN---SSTQKY---PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 278 QLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGE-VFTWGCNREGQLGYGTSN 336
+LG+ +++ P V + + V+ + HT +S+ G V+++G G+LG+G +N
Sbjct: 542 RLGHGDSNSRNIPTLVKDIS-NVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 337 SASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVI----VARNLKKSGSTPLK--- 389
Y P+V+E+L+G + V A ++ L + G+ S +T L+
Sbjct: 601 RV--YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKL 658
Query: 390 FHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQ 431
+V I+ G H +L+ D ++ W ++ +C Q
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG-QCGQ 699
Score = 225 (84.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 70/250 (28%), Positives = 120/250 (48%)
Query: 138 LSGPVLQVVGSGY-NSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
L G V+ V +GY +S A E+++WG G +LG G+++ + +P V + +
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGE 565
Query: 193 ISAAKFHSVAVTSLGE-VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKT 251
+S H++A++ G V+++G G G+LGH D + V P+ V L ++
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN------RVYKPK-VIEALQGMFIRK 618
Query: 252 IAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVD-TQPTPRRVSSLKL-KIIAVAAANKH 309
+ A ++ T G+V+ WG LG S + T P+ + L +I+ ++ + H
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH 676
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYT-PRVVESLKGKDLVGVAAAKYHTIVLG 368
+S EV+ WG N GQ G G NS T P+ V L G + ++A H++
Sbjct: 677 CLSLSHDNEVYAWGNNSMGQCGQG--NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Query: 369 A-DGERVIVA 377
A +R +VA
Sbjct: 735 ALPRDRQVVA 744
Score = 176 (67.0 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 63/236 (26%), Positives = 107/236 (45%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
V+ EVY WG +L + Q ++ P+ S ++ TI A ++ T +
Sbjct: 368 VSETCEVYVWGSNSSHQL------VEGTQEKILQPKLAPSFSDAQ---TIEAGQYCTFVI 418
Query: 263 TEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-----SLKLKIIAVAAANKHTAVVSESG 317
+ G V G G+LG + Q T ++++ S+K K+ + ++ HT + G
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK-KVSSSKGSDGHTLAFTTEG 477
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVES-LKGKDLVGVAAAKYHTIVLGADGERVIV 376
EVF+WG G+LG+G S S Y P++++ L+GK +V V+A H+ + DGE
Sbjct: 478 EVFSWGDGDYGKLGHGNS-STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 377 ARN----LKKSGSTPLKFHRKIK--LHVVSIAAGMVHSTALTEDGALFYWASSDPD 426
L S +K +V ++ G H+ AL++DG W+ D
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV-WSFGGGD 590
Score = 140 (54.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 50/174 (28%), Positives = 73/174 (41%)
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVF 320
+ +E EV+ WGSN QL + + P+ S + A T V+S G V
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS-DAQTIEAGQYCTFVISTDGSVR 425
Query: 321 TWGCNREGQLGYGTSNSASNYTPRVVESLKG-KDLVGVAAAKYHTIVLGADGERVIVARN 379
G G+LG G SN+ S E + K + + HT+ +GE
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG 485
Query: 380 ----LKKSGSTPLKFHRKIK--LH---VVSIAAGMVHSTALTEDGALFYWASSD 424
L S+ K+ + I+ L VV ++AG HS A+TEDG L+ W D
Sbjct: 486 DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 291 (107.5 bits), Expect = 9.7e-23, Sum P(2) = 9.7e-23
Identities = 90/277 (32%), Positives = 133/277 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF-HSVAVTSLGEVYTWGY 214
EVF +G + LGTG+ +P K+++L G IK +S H + T G VY WG+
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGH 101
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
+LG+ + Q I P +V + L ++V +A HH++ GEVF WG N
Sbjct: 102 NGYSQLGNGT----TNQG--IAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 275 REGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
GQ+G S QPTPR+V++ L +K ++ +A + V ++GEV+ WG N GQLG
Sbjct: 156 NCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLK--- 389
G N+ + TP V +L + + HT+ L +G N T K
Sbjct: 216 G--NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNL 273
Query: 390 ---FHRKI-KLHVVSIAA-GMVH-STALTEDGALFYW 420
H + K VV IAA H S A T+ G ++ W
Sbjct: 274 LSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMW 310
Score = 239 (89.2 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 81/283 (28%), Positives = 141/283 (49%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA-AAKHHTVL 261
VT EV+ +G LG D Q+ ++ P+++ + G +++K+++ + H +L
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGD-----NQSTLV-PKKLEALCG-KKIKSLSYGSGPHVLL 89
Query: 262 ATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV-SSLKLK-IIAVAAANKHTAVVSESGEV 319
+TE G V+ WG N QLG + + P +V ++L +K ++ VA + H+ ++ GEV
Sbjct: 90 STEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 320 FTWGCNREGQLGYGTSNSASNYTPR-VVESLKGKDLVGVAAAKYHTIVLGADGERVIVAR 378
F WG N GQ+G G++ + TPR V L K +VG+A + ++ + +GE
Sbjct: 150 FAWGYNNCGQVGSGSTTNQP--TPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 379 N------LKKSGS--TPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASS------- 423
N L +G+ TP++ + V I G H+ ALT++G L+ W ++
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 424 -DPDLRCQQLYSMCGRN-VVSISA--GKYWTAAVTATGDVYMW 462
+ + + M + VV I+A + +AA T G VYMW
Sbjct: 268 GNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMW 310
Score = 226 (84.6 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 68/201 (33%), Positives = 105/201 (52%)
Query: 136 DLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVI 190
+LL V++V ++S+A EVF+WG Q+G+G+ Q P KV + LH +
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRV 183
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
I+ + S+AV GEVY WGY G+LG + +G +TP RV + L S V
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN----NGNQ--LTPVRVAA-LHSVCVN 236
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANK-H 309
I HT+ T+ G ++ WG+N GQLG + + +P + K +++ +AA + H
Sbjct: 237 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAH 296
Query: 310 T-AVVSESGEVFTWGCNREGQ 329
T A ++ G V+ WG R GQ
Sbjct: 297 TSAAKTQGGHVYMWGQCR-GQ 316
Score = 183 (69.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 63/202 (31%), Positives = 99/202 (49%)
Query: 234 VITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT--PR 291
+++P+ + S R+ + + + T+ EVF +G N LG T D Q T P+
Sbjct: 12 LLSPQEIAS---IRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLG-TG-DNQSTLVPK 66
Query: 292 RVSSL---KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTP-RVVE 347
++ +L K+K ++ + H + +E G V+ WG N QLG GT+N P +V
Sbjct: 67 KLEALCGKKIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG--IAPIQVCT 123
Query: 348 SLKGKDLVGVAAAKYHTIVLGADGERVIVARN---LKKSGSTPLK-FHRKIK--LH---V 398
+L K +V VA +H++ L ADGE N SGST + RK+ LH V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRV 183
Query: 399 VSIAAGMVHSTALTEDGALFYW 420
V IA G S A+ ++G ++ W
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGW 205
Score = 51 (23.0 bits), Expect = 9.7e-23, Sum P(2) = 9.7e-23
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 556 LKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNL 601
L+ LC+++ + + NA L + A+DL++ C I +L
Sbjct: 455 LRKLCQHIIKRGITV-ENAFSLFSAAVRYDAEDLEEFCFKFCINHL 499
Score = 50 (22.7 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 571 PRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFASASLDILA-DLEK 625
P +A+ LL+++ S + L+K C+ I R I ++ S SA++ A DLE+
Sbjct: 437 PEDAIGLLDLATSYCENRLRKLCQHIIKRG---ITVENAFSLFSAAVRYDAEDLEE 489
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 339 (124.4 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 98/330 (29%), Positives = 161/330 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 2728 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQT-LFAVTADGKLYATGYG 2786
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + ++V + KH L++EG EV++WG
Sbjct: 2787 AGGRLGI------GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG-EVYSWGE 2839
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ ++++ VAA H+A V+ +G+++TWG R G+LG+
Sbjct: 2840 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 2899
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
S+S P++VE+L+G ++ +A T+ L DG+ + R
Sbjct: 2900 --SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 2957
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 2958 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 3017
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G+ V++I+ G T G+VY W
Sbjct: 3018 QGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3047
Score = 323 (118.8 bits), Expect = 7.5e-20, Sum P(4) = 7.5e-20
Identities = 99/335 (29%), Positives = 160/335 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
++ T+VF WG QLG K+P ++L + ++ AVT G+VY+
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 1824
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA---AKHHTVLATEGGEV 268
G GRLG + SG + PR++T+ L S VK +A +H T L +G +V
Sbjct: 1825 CGEATNGRLG---LGMSSGTVPI--PRQITA-LSSYVVKKVAVHSGGRHATALTVDG-KV 1877
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVVSESGEVFTWGCNRE 327
F+WG +G+LG+ S PR + +LK K I +A + H+A ++ SGE++TWG
Sbjct: 1878 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 1937
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA------RNLK 381
G+LG+G ++ + P++V+ L G ++ VA L E ++ + L
Sbjct: 1938 GRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 1995
Query: 382 KSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWAS---------SDPDLR 428
+ GS + I +L+ V I G S ALT+ G ++ W SD +R
Sbjct: 1996 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2055
Query: 429 CQQLYS-MCGRNVVSISAGKYWTAAVTATGDVYMW 462
Q+ + G+ +V ++ G AVT +G VY W
Sbjct: 2056 KPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2090
Score = 304 (112.1 bits), Expect = 5.3e-19, Sum P(3) = 5.3e-19
Identities = 72/220 (32%), Positives = 113/220 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV+SWG + +LG GN P ++SL G + ++A HS VT+ G++YTWG G
Sbjct: 2833 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2892
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV IA T+ T+ V++WG
Sbjct: 2893 RYGRLGHSDSEDQ------LKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 2945
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 2946 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3005
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+ + PR V+ L+GK ++ +A H + DGE
Sbjct: 3006 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3043
Score = 291 (107.5 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 80/245 (32%), Positives = 123/245 (50%)
Query: 129 CKSRTPVDLLSG-PVLQVVGSGYNSV----ATEVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ V G +S A ++++WG G +LG ++ Q P V+
Sbjct: 2853 CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 2912
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G VI + + ++ +T V++WG G G+LG G P ++
Sbjct: 2913 ALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR------GGSDGCKVPMKID 2966
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S G VK + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 2967 SLTGLGVVK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 3025
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA 360
IA+A + H +E GEV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 3026 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKVNRVACG 3083
Query: 361 KYHTI 365
HT+
Sbjct: 3084 SAHTL 3088
Score = 276 (102.2 bits), Expect = 6.5e-15, Sum P(4) = 6.5e-15
Identities = 82/301 (27%), Positives = 148/301 (49%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V+S G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 1803 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 1862
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H+ A+T G+V++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 1863 SGGRHATALTVDGKVFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 1915
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE++TWG G+LG+ TQ P+ V L ++I VA ++ T
Sbjct: 1916 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 1975
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 1976 ALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 2033
Query: 372 ERVIVARN----LKKSGSTPLKFHRKIK-LH---VVSIAAGMVHSTALTEDGALFYWASS 423
+ L ++ + ++ L +V +A G +H A+T+ G ++ W +
Sbjct: 2034 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2093
Query: 424 D 424
D
Sbjct: 2094 D 2094
Score = 273 (101.2 bits), Expect = 9.9e-16, Sum P(3) = 9.9e-16
Identities = 71/162 (43%), Positives = 92/162 (56%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL G V+K+ ++F SVA+T G VYTWG G
Sbjct: 2940 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWGKG 2998
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
RLGH D H V PR+V GL ++V IA H V TE GEV+TWG N
Sbjct: 2999 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3051
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
EGQLG + + PR V++L+ K+ VA + HT S S
Sbjct: 3052 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3093
Score = 273 (101.2 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V +VFSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 1872 TVDGKVFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 1927
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+YTWG G GRLGH D + P+ V LG R ++ ++ LA T+ G
Sbjct: 1928 ELYTWGLGEYGRLGHGD------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 1981
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 1982 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 2041
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+G+ P+VVE L+GK +V VA H + + G+ N + G
Sbjct: 2042 DYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2099
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 2100 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2134
Score = 225 (84.3 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 69/232 (29%), Positives = 112/232 (48%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEG 265
G +Y WG+ G+LG I + V TP + L R V+ I + T+ A T
Sbjct: 2726 GTIYGWGHNHRGQLG----GIEGAKVKVPTPCEALATL--RPVQLIGGEQ--TLFAVTAD 2777
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTW 322
G+++ G G+LG ++ TP + S++ +K +AV + KH +S GEV++W
Sbjct: 2778 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 2837
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LK 381
G +G+LG+G + PRV+ESL+G ++V VAA H+ + A G+ +
Sbjct: 2838 GEAEDGKLGHGNRSPCDR--PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 2895
Query: 382 KSGSTPLKFHRKIKL------H-VVSIAAGM--VHSTALTEDGALFYWASSD 424
+ G + + K KL H V+ IA G + LT+D ++ W D
Sbjct: 2896 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 2947
Score = 142 (55.0 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESG 317
T+ A G ++ WG N GQLG P +L L+ + + + V+ G
Sbjct: 2719 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 2778
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVI 375
+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 2779 KLYATGYGAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 2836
Query: 376 VAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ + VV +AAG HS +T G L+ W
Sbjct: 2837 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 2889
Score = 77 (32.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V++WG + Q G G + + P V L G I ++ HSVA T++
Sbjct: 2086 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 2136
Score = 43 (20.2 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 980 SGTPPSLSRPSLRNIQMQQGKQ 1001
+G PS+ +LR I + QGK+
Sbjct: 3150 TGLGPSVGFDTLRGILISQGKE 3171
Score = 39 (18.8 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 1016 SIAPSQGSPSDSPGMNRWFKPEAETPSSIRSI-QMEEKAMKDLK 1058
++ PS +PS +R F P + P + I + K +D++
Sbjct: 2288 AVTPSAVTPSAPSASSRPFIPVTDDPGAASIIAETMTKTKEDVE 2331
Score = 38 (18.4 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 152 SVATEVFSWGSGANYQLG 169
SV T + WGS + +G
Sbjct: 1459 SVTTPKYKWGSVTHQSVG 1476
Score = 38 (18.4 bits), Expect = 7.5e-20, Sum P(4) = 7.5e-20
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 449 WTAAVTATGDVYMW 462
WT + +G +Y W
Sbjct: 2718 WTLSAGGSGTIYGW 2731
Score = 38 (18.4 bits), Expect = 7.5e-20, Sum P(4) = 7.5e-20
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 703 ALRKKLQQIE-MLEVKLSNGHILDEQQIAKLQTKSVLERSLAELGV--PIELPQAIAASA 759
+L K L +E L + + HIL QI + + + +L G+ P+E P + ++SA
Sbjct: 2188 SLAKILLSLEGNLAKQQALSHILTALQI--MYARDAVVGALMPAGMLAPVECP-SFSSSA 2244
Query: 760 ASPD 763
+ D
Sbjct: 2245 PASD 2248
Score = 38 (18.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 3503 PRTIADFRGRDFVIQVLDKYN 3523
Score = 37 (18.1 bits), Expect = 3.0e-19, Sum P(4) = 3.0e-19
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ ++ + + G +HCL+ S
Sbjct: 2807 SIQHVFIKKVAVNSGGKHCLALS 2829
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 339 (124.4 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 98/330 (29%), Positives = 161/330 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 2764 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQT-LFAVTADGKLYATGYG 2822
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + ++V + KH L++EG EV++WG
Sbjct: 2823 AGGRLGI------GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG-EVYSWGE 2875
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ ++++ VAA H+A V+ +G+++TWG R G+LG+
Sbjct: 2876 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 2935
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
S+S P++VE+L+G ++ +A T+ L DG+ + R
Sbjct: 2936 --SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 2993
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 2994 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 3053
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G+ V++I+ G T G+VY W
Sbjct: 3054 QGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3083
Score = 323 (118.8 bits), Expect = 7.9e-20, Sum P(4) = 7.9e-20
Identities = 99/335 (29%), Positives = 160/335 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
++ T+VF WG QLG K+P ++L + ++ AVT G+VY+
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 1824
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA---AKHHTVLATEGGEV 268
G GRLG + SG + PR++T+ L S VK +A +H T L +G +V
Sbjct: 1825 CGEATNGRLG---LGMSSGTVPI--PRQITA-LSSYVVKKVAVHSGGRHATALTVDG-KV 1877
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVVSESGEVFTWGCNRE 327
F+WG +G+LG+ S PR + +LK K I +A + H+A ++ SGE++TWG
Sbjct: 1878 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 1937
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA------RNLK 381
G+LG+G ++ + P++V+ L G ++ VA L E ++ + L
Sbjct: 1938 GRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 1995
Query: 382 KSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWAS---------SDPDLR 428
+ GS + I +L+ V I G S ALT+ G ++ W SD +R
Sbjct: 1996 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2055
Query: 429 CQQLYS-MCGRNVVSISAGKYWTAAVTATGDVYMW 462
Q+ + G+ +V ++ G AVT +G VY W
Sbjct: 2056 KPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2090
Score = 304 (112.1 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 72/220 (32%), Positives = 113/220 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV+SWG + +LG GN P ++SL G + ++A HS VT+ G++YTWG G
Sbjct: 2869 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2928
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV IA T+ T+ V++WG
Sbjct: 2929 RYGRLGHSDSEDQ------LKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 2981
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 2982 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3041
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+ + PR V+ L+GK ++ +A H + DGE
Sbjct: 3042 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3079
Score = 291 (107.5 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 80/245 (32%), Positives = 123/245 (50%)
Query: 129 CKSRTPVDLLSG-PVLQVVGSGYNSV----ATEVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ V G +S A ++++WG G +LG ++ Q P V+
Sbjct: 2889 CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 2948
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G VI + + ++ +T V++WG G G+LG G P ++
Sbjct: 2949 ALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR------GGSDGCKVPMKID 3002
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S G VK + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 3003 SLTGLGVVK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 3061
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA 360
IA+A + H +E GEV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 3062 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKVNRVACG 3119
Query: 361 KYHTI 365
HT+
Sbjct: 3120 SAHTL 3124
Score = 276 (102.2 bits), Expect = 6.8e-15, Sum P(4) = 6.8e-15
Identities = 82/301 (27%), Positives = 148/301 (49%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V+S G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 1803 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 1862
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H+ A+T G+V++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 1863 SGGRHATALTVDGKVFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 1915
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE++TWG G+LG+ TQ P+ V L ++I VA ++ T
Sbjct: 1916 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 1975
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 1976 ALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 2033
Query: 372 ERVIVARN----LKKSGSTPLKFHRKIK-LH---VVSIAAGMVHSTALTEDGALFYWASS 423
+ L ++ + ++ L +V +A G +H A+T+ G ++ W +
Sbjct: 2034 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2093
Query: 424 D 424
D
Sbjct: 2094 D 2094
Score = 273 (101.2 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 71/162 (43%), Positives = 92/162 (56%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL G V+K+ ++F SVA+T G VYTWG G
Sbjct: 2976 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWGKG 3034
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
RLGH D H V PR+V GL ++V IA H V TE GEV+TWG N
Sbjct: 3035 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3087
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
EGQLG + + PR V++L+ K+ VA + HT S S
Sbjct: 3088 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3129
Score = 273 (101.2 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V +VFSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 1872 TVDGKVFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 1927
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+YTWG G GRLGH D + P+ V LG R ++ ++ LA T+ G
Sbjct: 1928 ELYTWGLGEYGRLGHGD------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 1981
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 1982 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 2041
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+G+ P+VVE L+GK +V VA H + + G+ N + G
Sbjct: 2042 DYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2099
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 2100 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2134
Score = 225 (84.3 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 69/232 (29%), Positives = 112/232 (48%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEG 265
G +Y WG+ G+LG I + V TP + L R V+ I + T+ A T
Sbjct: 2762 GTIYGWGHNHRGQLG----GIEGAKVKVPTPCEALATL--RPVQLIGGEQ--TLFAVTAD 2813
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTW 322
G+++ G G+LG ++ TP + S++ +K +AV + KH +S GEV++W
Sbjct: 2814 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 2873
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LK 381
G +G+LG+G + PRV+ESL+G ++V VAA H+ + A G+ +
Sbjct: 2874 GEAEDGKLGHGNRSPCDR--PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 2931
Query: 382 KSGSTPLKFHRKIKL------H-VVSIAAGM--VHSTALTEDGALFYWASSD 424
+ G + + K KL H V+ IA G + LT+D ++ W D
Sbjct: 2932 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 2983
Score = 142 (55.0 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESG 317
T+ A G ++ WG N GQLG P +L L+ + + + V+ G
Sbjct: 2755 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 2814
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVI 375
+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 2815 KLYATGYGAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 2872
Query: 376 VAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ + VV +AAG HS +T G L+ W
Sbjct: 2873 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 2925
Score = 77 (32.2 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V++WG + Q G G + + P V L G I ++ HSVA T++
Sbjct: 2086 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 2136
Score = 43 (20.2 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 980 SGTPPSLSRPSLRNIQMQQGKQ 1001
+G PS+ +LR I + QGK+
Sbjct: 3186 TGLGPSVGFDTLRGILISQGKE 3207
Score = 39 (18.8 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 1016 SIAPSQGSPSDSPGMNRWFKPEAETPSSIRSI-QMEEKAMKDLK 1058
++ PS +PS +R F P + P + I + K +D++
Sbjct: 2288 AVTPSAVTPSAPSASSRPFIPVTDDPGAASIIAETMTKTKEDVE 2331
Score = 38 (18.4 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 152 SVATEVFSWGSGANYQLG 169
SV T + WGS + +G
Sbjct: 1459 SVTTPKYKWGSVTHQSVG 1476
Score = 38 (18.4 bits), Expect = 7.9e-20, Sum P(4) = 7.9e-20
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 449 WTAAVTATGDVYMW 462
WT + +G +Y W
Sbjct: 2754 WTLSAGGSGTIYGW 2767
Score = 38 (18.4 bits), Expect = 7.9e-20, Sum P(4) = 7.9e-20
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 703 ALRKKLQQIE-MLEVKLSNGHILDEQQIAKLQTKSVLERSLAELGV--PIELPQAIAASA 759
+L K L +E L + + HIL QI + + + +L G+ P+E P + ++SA
Sbjct: 2188 SLAKILLSLEGNLAKQQALSHILTALQI--MYARDAVVGALMPAGMLAPVECP-SFSSSA 2244
Query: 760 ASPD 763
+ D
Sbjct: 2245 PASD 2248
Score = 38 (18.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 3539 PRTIADFRGRDFVIQVLDKYN 3559
Score = 37 (18.1 bits), Expect = 3.2e-19, Sum P(4) = 3.2e-19
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ ++ + + G +HCL+ S
Sbjct: 2843 SIQHVFIKKVAVNSGGKHCLALS 2865
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 340 (124.7 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 99/330 (30%), Positives = 161/330 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQT-LFAVTADGKLYATGYG 4012
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + ++V + KH L++EG EV++WG
Sbjct: 4013 AGGRLGI------GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG-EVYSWGE 4065
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ ++++ VAA H+A V+ +G+++TWG R G+LG+
Sbjct: 4066 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4125
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
S+S P++VE+L+G +V +A T+ L DG+ + R
Sbjct: 4126 --SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 4184 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4243
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G+ V++I+ G T G+VY W
Sbjct: 4244 QGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Score = 332 (121.9 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 105/351 (29%), Positives = 166/351 (47%)
Query: 139 SGPVLQVVGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISA 195
SG +++ +G S AT +VF WG QLG K+P ++L + ++
Sbjct: 2940 SGSLIRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAG 2999
Query: 196 AKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA- 254
AVT G+VY G GRLG I SG + PR++T+ L S VK +A
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLG---LGISSGTVPI--PRQITA-LSSYVVKKVAVH 3053
Query: 255 --AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTA 311
+H T L +G +VF+WG +G+LG+ S PR + +LK K I +A + H+A
Sbjct: 3054 SGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
++ SGE++TWG G+LG+G ++ + P++V+ L G ++ VA L
Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170
Query: 372 ERVIVA------RNLKKSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWA 421
E ++ + L + GS + I +L+ V I G S ALT+ G ++ W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3230
Query: 422 S---------SDPDLRCQQLYS-MCGRNVVSISAGKYWTAAVTATGDVYMW 462
SD +R Q+ + G+ +V ++ G AVT +G VY W
Sbjct: 3231 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281
Score = 307 (113.1 bits), Expect = 6.9e-22, Sum P(3) = 6.9e-22
Identities = 83/254 (32%), Positives = 133/254 (52%)
Query: 189 VIKLISAAK-FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
++K+ + + H +A+ + GEVY+WG G GGRLGH D + + VI+ + +
Sbjct: 495 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLEEPKVISA--FSGKQAGK 551
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVA-- 304
V IA ++ T GE++TWG G+LG+ S + + P V+ LK LK+I VA
Sbjct: 552 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+ + T V+E+G+V++WG G+LG G S+ TP+++E L+ D+V V +
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDVVKVRCGSQFS 669
Query: 365 IVLGADGERVIVAR-NLKKSGSTPLKFHRKIKL-------HVVSIAAGMVHSTALTEDGA 416
I L DG+ + + ++ G + R KL V+ +AAG H ALTED
Sbjct: 670 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 417 LFYWASSDPDLRCQ 430
+ W S+D +CQ
Sbjct: 730 VHSWGSND---QCQ 740
Score = 305 (112.4 bits), Expect = 8.4e-19, Sum P(3) = 8.4e-19
Identities = 72/220 (32%), Positives = 113/220 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV+SWG + +LG GN P ++SL G + ++A HS VT+ G++YTWG G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV IA T+ T+ V++WG
Sbjct: 4119 RYGRLGHSDSEDQ------LKPKLVEA-LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+ + PR V+ L+GK ++ +A H + DGE
Sbjct: 4232 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269
Score = 290 (107.1 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 79/245 (32%), Positives = 123/245 (50%)
Query: 129 CKSRTPVDLLSG-PVLQVVGSGYNSV----ATEVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ V G +S A ++++WG G +LG ++ Q P V+
Sbjct: 4079 CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 4138
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G V+ + + ++ +T V++WG G G+LG G P ++
Sbjct: 4139 ALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR------GGSDGCKVPMKID 4192
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S G VK + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 4193 SLTGLGVVK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4251
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA 360
IA+A + H +E GEV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 4252 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKVNRVACG 4309
Query: 361 KYHTI 365
HT+
Sbjct: 4310 SAHTL 4314
Score = 285 (105.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 76/236 (32%), Positives = 122/236 (51%)
Query: 147 GSGYNSVAT--EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHG-----FVIKLISAAKFH 199
G Y ++A EV+SWG G +LG G+ + P + + G V+ I+ +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTY 562
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH-- 257
S A+T+ GE+YTWG G GRLGH S A+ P V +GL +V +A
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGS----SEDEAI--PMLV-AGLKGLKVIDVACGSGDA 615
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
T+ TE G+V++WG G+LG D TP+ + L+ L ++ V ++ + +++
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD 675
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+V++WG +LG+GT Y P+++E L+GK ++ VAA H + L D E
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHV-RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Score = 273 (101.2 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 71/162 (43%), Positives = 92/162 (56%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL G V+K+ ++F SVA+T G VYTWG G
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWGKG 4224
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
RLGH D H V PR+V GL ++V IA H V TE GEV+TWG N
Sbjct: 4225 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
EGQLG + + PR V++L+ K+ VA + HT S S
Sbjct: 4278 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319
Score = 273 (101.2 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 81/301 (26%), Positives = 148/301 (49%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V++ G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H+ A+T G+V++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 3106
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE++TWG G+LG+ TQ P+ V L ++I VA ++ T
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 372 ERVIVARN----LKKSGSTPLKFHRKIK-LH---VVSIAAGMVHSTALTEDGALFYWASS 423
+ L ++ + ++ L +V +A G +H A+T+ G ++ W +
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 424 D 424
D
Sbjct: 3285 D 3285
Score = 273 (101.2 bits), Expect = 3.6e-14, Sum P(4) = 3.6e-14
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V +VFSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 3063 TVDGKVFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3118
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+YTWG G GRLGH D + P+ V LG R ++ ++ LA T+ G
Sbjct: 3119 ELYTWGLGEYGRLGHGD------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3172
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 3173 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3232
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+G+ P+VVE L+GK +V VA H + + G+ N + G
Sbjct: 3233 DYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 3291 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 226 (84.6 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 70/232 (30%), Positives = 112/232 (48%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEG 265
G +Y WG+ G+LG I + V TP + L R V+ I + T+ A T
Sbjct: 3952 GTIYGWGHNHRGQLG----GIEGAKVKVPTPCEALATL--RPVQLIGGEQ--TLFAVTAD 4003
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTW 322
G+++ G G+LG ++ TP + S++ +K +AV + KH +S GEV++W
Sbjct: 4004 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4063
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LK 381
G +G+LG+G + PRV+ESL+G ++V VAA H+ + A G+ +
Sbjct: 4064 GEAEDGKLGHGNRSPCDR--PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 382 KSGSTPLKFHRKIKL------H-VVSIAAGM--VHSTALTEDGALFYWASSD 424
+ G + + K KL H VV IA G + LT+D ++ W D
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Score = 221 (82.9 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 64/219 (29%), Positives = 109/219 (49%)
Query: 147 GSGYNSVAT---EVFSWGSGANY-QLGTGNAHLQKLPCKVDSLHGF-VIKLI-SAAKFHS 200
GS Y++ T E+++WG G NY +LG G++ + +P V L G VI + + +
Sbjct: 559 GSTYSAAITAEGELYTWGRG-NYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQT 617
Query: 201 VAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV 260
+AVT G+V++WG G G+LG G TP+ + L V + ++
Sbjct: 618 LAVTENGQVWSWGDGDYGKLGR------GGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSI 670
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEV 319
T+ G+V++WG +LG+ + + P+ + L+ K+I VAA + H ++E EV
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730
Query: 320 FTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
+WG N + Q + T + P + L K +VG+A
Sbjct: 731 HSWGSNDQCQ-HFDTLR-VTKPEPAALPGLDTKHIVGIA 767
Score = 192 (72.6 bits), Expect = 7.9e-10, Sum P(3) = 7.9e-10
Identities = 53/165 (32%), Positives = 81/165 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGY 214
+V+SWG G +LG G + K P ++ L V+K+ ++F S+A+T G+VY+WG
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF-SIALTKDGQVYSWGK 683
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G RLGH G + ++ GL ++V +AA H + TE EV +WGSN
Sbjct: 684 GDNQRLGH-------GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Query: 275 REGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGE 318
+ Q T T+P P + L K I+ +A + S E
Sbjct: 737 DQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781
Score = 146 (56.5 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 57/210 (27%), Positives = 96/210 (45%)
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
A VI P + GL + V IA A+ ++ + G V+T Y S DT P+
Sbjct: 437 ANVIGPIQC-EGLANLGVTQIACAEKRFLILSRNGRVYTQA--------YNS-DTL-APQ 485
Query: 292 RVSSLKLK-IIAVAAANK--HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 348
V L + I+ +AA + H ++ +GEV++WGC G+LG+G + P+V+ +
Sbjct: 486 LVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEE--PKVISA 543
Query: 349 LKGKD----LVGVAAAKYHTIVLGADGERVIVAR-NLKKSG-------STPLKFHRKIKL 396
GK +V +A ++ + A+GE R N + G + P+ L
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 397 HVVSIAAGM--VHSTALTEDGALFYWASSD 424
V+ +A G + A+TE+G ++ W D
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESG 317
T+ A G ++ WG N GQLG P +L L+ + + + V+ G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVI 375
+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 376 VAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ + VV +AAG HS +T G L+ W
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Score = 105 (42.0 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 42/160 (26%), Positives = 69/160 (43%)
Query: 127 EDCKSRTPVDLLSG-PVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCK 181
+ CK+ ++ L V++V GS ++ T +V+SWG G N +LG G + P
Sbjct: 643 DGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL 702
Query: 182 VDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
++ L G + ++A H +A+T EV++WG + H FD V P
Sbjct: 703 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQH--FDT----LRVTKPEPAA 754
Query: 242 -SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG 280
GL ++ + IA + F W S E +G
Sbjct: 755 LPGLDTKHIVGIACGP---------AQSFAWSSCSEWSIG 785
Score = 77 (32.2 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V++WG + Q G G + + P V L G I ++ HSVA T++
Sbjct: 3277 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3327
Score = 67 (28.6 bits), Expect = 6.9e-22, Sum P(3) = 6.9e-22
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGK-------KSKD----NPPLVTRLH 478
Q + + G+ V I G ++ A+T +G V+ W GK D P +V L
Sbjct: 3197 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTW-GKGDYFRLGHGSDVHVRKPQVVEGLR 3255
Query: 479 GIKKATSVSVGETHLLIV---GSLY 500
G KK V+VG H L V G +Y
Sbjct: 3256 G-KKIVHVAVGALHCLAVTDSGQVY 3279
Score = 43 (20.2 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 980 SGTPPSLSRPSLRNIQMQQGKQ 1001
+G PS+ +LR I + QGK+
Sbjct: 4376 TGLGPSVGFDTLRGILISQGKE 4397
Score = 40 (19.1 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 1017 IAPSQGSPSDSPGMNRWFKPEAETPSSIRSIQ 1048
+A PS SPG EA TP +++ I+
Sbjct: 2414 LAVESTHPS-SPGFEDCSSSEATTPVAVQHIR 2444
Score = 39 (18.8 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 152 SVATEVFSWGSGANYQLGTGNA 173
SV T + WGS + +G A
Sbjct: 2650 SVTTPKYKWGSVTHQSVGVVKA 2671
Score = 39 (18.8 bits), Expect = 5.2e-19, Sum P(3) = 5.2e-19
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 942 SEGKVLLSSFMTS-KPIPVVSARAQQATDGDKSTPPWAASGT 982
S+ +LL S+ K + V S+ Q + D S P W +SG+
Sbjct: 2773 SQPGMLLDSWSRMVKSLNVSSSVNQASRLIDGSEPCWQSSGS 2814
Score = 38 (18.4 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 449 WTAAVTATGDVYMW 462
WT + +G +Y W
Sbjct: 3944 WTLSAGGSGTIYGW 3957
Score = 38 (18.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 4730 PRTIADFRGRDFVIQVLDKYN 4750
Score = 37 (18.1 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ ++ + + G +HCL+ S
Sbjct: 4033 SIQHVFIKKVAVNSGGKHCLALS 4055
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 298 (110.0 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 95/328 (28%), Positives = 154/328 (46%)
Query: 160 WGSGANYQLGTGNAHLQKLPCKVDSLHGFV----IKLISAAKFHSVAVTSLGEVYTWGYG 215
WG + Q G G+ +LQ + ++GF+ +K ++ HSV + GEVYT G
Sbjct: 4 WGYSSFGQPGIGS-NLQVI-IPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
G+LGH G P + L + + +A + H+V ++ G+VF+WG+
Sbjct: 62 TKGQLGHES----EGSK----PEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112
Query: 276 EGQLGYTSVDTQPT-PRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
+GQLG T+++ T PR + L + I+ ++ N H ++ G+ FTWG N GQLG G
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRK 393
S +P+ V+SL G L VAA H+ L G + SG L R
Sbjct: 173 -KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSG--AVFGWGKNSSGQLGLSDERD 229
Query: 394 ------IKL----HVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQLY 433
+KL VV I+ G H+ LT+ G +F + S + ++ +++
Sbjct: 230 RESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289
Query: 434 SMCGRNVVSISAGKYWTAA-VTATGDVY 460
+ G V I+ G++ T A V ++G +Y
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIY 317
Score = 266 (98.7 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 71/218 (32%), Positives = 111/218 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV++ G QLG + + P + +L G I ++ + HSVA++ G+V++WG G
Sbjct: 54 EVYTCGLNTKGQLGHESEGSKPEP--IGALAGQHIVHVACGESHSVALSDQGQVFSWGAG 111
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
G+LG + + + AV PR + L + + I+ H + G+ FTWG N
Sbjct: 112 SDGQLG-----LTTIEDAVTVPRLIKK-LNQQTILQISCGNWHCLALAADGQFFTWGQNS 165
Query: 276 EGQLGY-TSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
GQLG +Q +P+RV SL + + VAA H+ +S SG VF WG N GQLG
Sbjct: 166 YGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL- 224
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
S+ +P V+ L+ + +V ++ + HT VL G
Sbjct: 225 -SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSG 261
Score = 254 (94.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 85/282 (30%), Positives = 134/282 (47%)
Query: 125 TLEDCKS--RTPVDLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGN-AHLQK 177
T+ED + R L +LQ+ ++ +A + F+WG + QLG G Q
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQA 179
Query: 178 LPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITP 237
P +V SL G + ++A HS A++ G V+ WG G+LG D + +P
Sbjct: 180 SPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSD------ERDRESP 233
Query: 238 RRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK 297
V L S++V I+ + HT + T+ G VFT+G+ GQLG+ S++ + PRRV L
Sbjct: 234 CHVKL-LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM 292
Query: 298 -LKIIAVAAANKHT-AVVSESGEVFTWGCNREGQLGYGTSNSASNYTP-RVVESLKGKDL 354
++ +A HT A V SG ++ +GC GQLG G + + +P + + L
Sbjct: 293 GSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQL 352
Query: 355 VGVA-AAKYHTIV-LGADGERVIVARNLKKSGSTPLKFHRKI 394
G A KYH + + + G++ V + K S P R I
Sbjct: 353 SGKPDACKYHIVKHIFSGGDQTFVLCS-KYENSLPADDFRTI 393
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 339 (124.4 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 98/330 (29%), Positives = 161/330 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 3899 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQT-LFAVTADGKLYATGYG 3957
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + ++V + KH L++EG EV++WG
Sbjct: 3958 AGGRLGI------GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG-EVYSWGE 4010
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ ++++ VAA H+A V+ +G+++TWG R G+LG+
Sbjct: 4011 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4070
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
S+S P++VE+L+G ++ +A T+ L DG+ + R
Sbjct: 4071 --SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4128
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 4129 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4188
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G+ V++I+ G T G+VY W
Sbjct: 4189 QGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4218
Score = 323 (118.8 bits), Expect = 2.5e-19, Sum P(4) = 2.5e-19
Identities = 99/335 (29%), Positives = 160/335 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
++ T+VF WG QLG K+P ++L + ++ AVT G+VY+
Sbjct: 2900 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 2959
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA---AKHHTVLATEGGEV 268
G GRLG + SG + PR++T+ L S VK +A +H T L +G +V
Sbjct: 2960 CGEATNGRLG---LGMSSGTVPI--PRQITA-LSSYVVKKVAVHSGGRHATALTVDG-KV 3012
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVVSESGEVFTWGCNRE 327
F+WG +G+LG+ S PR + +LK K I +A + H+A ++ SGE++TWG
Sbjct: 3013 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3072
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA------RNLK 381
G+LG+G ++ + P++V+ L G ++ VA L E ++ + L
Sbjct: 3073 GRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3130
Query: 382 KSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWAS---------SDPDLR 428
+ GS + I +L+ V I G S ALT+ G ++ W SD +R
Sbjct: 3131 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3190
Query: 429 CQQLYS-MCGRNVVSISAGKYWTAAVTATGDVYMW 462
Q+ + G+ +V ++ G AVT +G VY W
Sbjct: 3191 KPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3225
Score = 306 (112.8 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 82/254 (32%), Positives = 133/254 (52%)
Query: 189 VIKLISAAK-FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
++K+ + + H +A+ + GEVY+WG G GGRLGH D + + VI+ + +
Sbjct: 441 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLEEPKVISA--FSGKQAGK 497
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVA-- 304
V IA ++ T GE++TWG G+LG+ S + + P V+ LK LK+I VA
Sbjct: 498 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 557
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+ + T V+E+G+V++WG G+LG G S+ TP+++E L+ D++ V +
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDVIKVRCGSQFS 615
Query: 365 IVLGADGERVIVAR-NLKKSGSTPLKFHRKIKL-------HVVSIAAGMVHSTALTEDGA 416
I L DG+ + + ++ G + R KL V+ +AAG H ALTED
Sbjct: 616 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675
Query: 417 LFYWASSDPDLRCQ 430
+ W S+D +CQ
Sbjct: 676 VHSWGSND---QCQ 686
Score = 304 (112.1 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 72/220 (32%), Positives = 113/220 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV+SWG + +LG GN P ++SL G + ++A HS VT+ G++YTWG G
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4063
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV IA T+ T+ V++WG
Sbjct: 4064 RYGRLGHSDSEDQ------LKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4116
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 4117 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4176
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+ + PR V+ L+GK ++ +A H + DGE
Sbjct: 4177 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4214
Score = 291 (107.5 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 80/245 (32%), Positives = 123/245 (50%)
Query: 129 CKSRTPVDLLSG-PVLQVVGSGYNSV----ATEVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ V G +S A ++++WG G +LG ++ Q P V+
Sbjct: 4024 CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 4083
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G VI + + ++ +T V++WG G G+LG G P ++
Sbjct: 4084 ALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR------GGSDGCKVPMKID 4137
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S G VK + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 4138 SLTGLGVVK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4196
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA 360
IA+A + H +E GEV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 4197 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKVNRVACG 4254
Query: 361 KYHTI 365
HT+
Sbjct: 4255 SAHTL 4259
Score = 286 (105.7 bits), Expect = 2.3e-18, Sum P(4) = 2.3e-18
Identities = 77/236 (32%), Positives = 122/236 (51%)
Query: 147 GSGYNSVAT--EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHG-----FVIKLISAAKFH 199
G Y ++A EV+SWG G +LG G+ + P + + G V+ I+ +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTY 508
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH-- 257
S A+T+ GE+YTWG G GRLGH S A+ P V +GL +V +A
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGS----SEDEAI--PMLV-AGLKGLKVIDVACGSGDA 561
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
T+ TE G+V++WG G+LG D TP+ + L+ L +I V ++ + +++
Sbjct: 562 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD 621
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+V++WG +LG+GT Y P+++E L+GK ++ VAA H + L D E
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHV-RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675
Score = 276 (102.2 bits), Expect = 2.1e-14, Sum P(4) = 2.1e-14
Identities = 82/301 (27%), Positives = 148/301 (49%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V+S G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 2938 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 2997
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H+ A+T G+V++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 2998 SGGRHATALTVDGKVFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 3050
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE++TWG G+LG+ TQ P+ V L ++I VA ++ T
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3110
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 3111 ALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 3168
Query: 372 ERVIVARN----LKKSGSTPLKFHRKIK-LH---VVSIAAGMVHSTALTEDGALFYWASS 423
+ L ++ + ++ L +V +A G +H A+T+ G ++ W +
Sbjct: 3169 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3228
Query: 424 D 424
D
Sbjct: 3229 D 3229
Score = 273 (101.2 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 71/162 (43%), Positives = 92/162 (56%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL G V+K+ ++F SVA+T G VYTWG G
Sbjct: 4111 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWGKG 4169
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
RLGH D H V PR+V GL ++V IA H V TE GEV+TWG N
Sbjct: 4170 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4222
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
EGQLG + + PR V++L+ K+ VA + HT S S
Sbjct: 4223 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4264
Score = 273 (101.2 bits), Expect = 4.3e-14, Sum P(4) = 4.3e-14
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V +VFSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 3007 TVDGKVFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3062
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+YTWG G GRLGH D + P+ V LG R ++ ++ LA T+ G
Sbjct: 3063 ELYTWGLGEYGRLGHGD------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3116
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 3117 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3176
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+G+ P+VVE L+GK +V VA H + + G+ N + G
Sbjct: 3177 DYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3234
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 3235 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3269
Score = 225 (84.3 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 69/232 (29%), Positives = 112/232 (48%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEG 265
G +Y WG+ G+LG I + V TP + L R V+ I + T+ A T
Sbjct: 3897 GTIYGWGHNHRGQLG----GIEGAKVKVPTPCEALATL--RPVQLIGGEQ--TLFAVTAD 3948
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTW 322
G+++ G G+LG ++ TP + S++ +K +AV + KH +S GEV++W
Sbjct: 3949 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4008
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LK 381
G +G+LG+G + PRV+ESL+G ++V VAA H+ + A G+ +
Sbjct: 4009 GEAEDGKLGHGNRSPCDR--PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4066
Query: 382 KSGSTPLKFHRKIKL------H-VVSIAAGM--VHSTALTEDGALFYWASSD 424
+ G + + K KL H V+ IA G + LT+D ++ W D
Sbjct: 4067 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4118
Score = 221 (82.9 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 72/266 (27%), Positives = 125/266 (46%)
Query: 147 GSGYNSVAT---EVFSWGSGANY-QLGTGNAHLQKLPCKVDSLHGF-VIKLI-SAAKFHS 200
GS Y++ T E+++WG G NY +LG G++ + +P V L G VI + + +
Sbjct: 505 GSTYSAAITAEGELYTWGRG-NYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQT 563
Query: 201 VAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV 260
+AVT G+V++WG G G+LG G TP+ + L V + ++
Sbjct: 564 LAVTENGQVWSWGDGDYGKLGR------GGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSI 616
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEV 319
T+ G+V++WG +LG+ + + P+ + L+ K+I VAA + H ++E EV
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 676
Query: 320 FTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN 379
+WG N + Q + T + P + L K +VG+A + + E I R
Sbjct: 677 HSWGSNDQCQ-HFDTLR-VTKPEPTALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLRV 734
Query: 380 LKKSGSTPLKFHRKIKLHVVSIAAGM 405
P+ F + + L + ++ GM
Sbjct: 735 PFVVDICPVTFEQ-LDLLLRQVSEGM 759
Score = 214 (80.4 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 65/255 (25%), Positives = 114/255 (44%)
Query: 234 VITPRRVTSGLGSRRVKTIAAAK-HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR 292
++ P+ V VK A + HH + GEV++WG G+LG+ P+
Sbjct: 427 MLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKV 486
Query: 293 VSSLKLK-----IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE 347
+S+ K ++ +A + ++A ++ GE++TWG G+LG+G+S + P +V
Sbjct: 487 ISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA--IPMLVA 544
Query: 348 SLKGKDLVGVAAAK--YHTIVL---G-----ADGERVIVARNLKKSGSTPLKFHRKIKLH 397
LKG ++ VA T+ + G DG+ + R TP + L
Sbjct: 545 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 604
Query: 398 VVSIAAGMVHSTALTEDGALFYWASSDPD---------LRCQQLYS-MCGRNVVSISAGK 447
V+ + G S ALT+DG ++ W D +R +L + G+ V+ ++AG
Sbjct: 605 VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 664
Query: 448 YWTAAVTATGDVYMW 462
A+T +V+ W
Sbjct: 665 THCLALTEDSEVHSW 679
Score = 144 (55.7 bits), Expect = 0.00072, Sum P(4) = 0.00072
Identities = 54/210 (25%), Positives = 94/210 (44%)
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
A VI P + GL S V +A A+ ++ + G V+T N + P+
Sbjct: 383 ANVIGPIQC-EGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQ 431
Query: 292 RVSSLKLK-IIAVAAANK--HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 348
V L + I+ +AA + H ++ +GEV++WGC G+LG+G + P+V+ +
Sbjct: 432 LVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEE--PKVISA 489
Query: 349 LKGKD----LVGVAAAKYHTIVLGADGERVIVAR-NLKKSG-------STPLKFHRKIKL 396
GK +V +A ++ + A+GE R N + G + P+ L
Sbjct: 490 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 549
Query: 397 HVVSIAAGM--VHSTALTEDGALFYWASSD 424
V+ +A G + A+TE+G ++ W D
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGD 579
Score = 142 (55.0 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESG 317
T+ A G ++ WG N GQLG P +L L+ + + + V+ G
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3949
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVI 375
+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 3950 KLYATGYGAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4007
Query: 376 VAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ + VV +AAG HS +T G L+ W
Sbjct: 4008 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4060
Score = 77 (32.2 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V++WG + Q G G + + P V L G I ++ HSVA T++
Sbjct: 3221 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3271
Score = 67 (28.6 bits), Expect = 1.8e-20, Sum P(4) = 1.8e-20
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGK-------KSKD----NPPLVTRLH 478
Q + + G+ V I G ++ A+T +G V+ W GK D P +V L
Sbjct: 3141 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTW-GKGDYFRLGHGSDVHVRKPQVVEGLR 3199
Query: 479 GIKKATSVSVGETHLLIV---GSLY 500
G KK V+VG H L V G +Y
Sbjct: 3200 G-KKIVHVAVGALHCLAVTDSGQVY 3223
Score = 43 (20.2 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 980 SGTPPSLSRPSLRNIQMQQGKQ 1001
+G PS+ +LR I + QGK+
Sbjct: 4321 TGLGPSVGFDTLRGILISQGKE 4342
Score = 43 (20.2 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1017 IAPSQGSPSDSPGMNRWFKPEAETPSSIRSIQM 1049
+A PS SPG EA TP S++ I +
Sbjct: 2358 LAVESTHPS-SPGCEDCSSSEATTPVSVQHIHL 2389
Score = 39 (18.8 bits), Expect = 4.6e-20, Sum P(4) = 4.6e-20
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 1016 SIAPSQGSPSDSPGMNRWFKPEAETPSSIRSI-QMEEKAMKDLK 1058
++ PS +PS +R F P + P + I + K +D++
Sbjct: 3423 AVTPSAVTPSAPSASSRPFIPVTDDPGAASIIAETMTKTKEDVE 3466
Score = 39 (18.8 bits), Expect = 6.4e-19, Sum P(3) = 6.4e-19
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 942 SEGKVLLSSFMTS-KPIPVVSARAQQATDGDKSTPPWAASGT 982
S+ +LL S+ K + V S+ Q + D S P W +SG+
Sbjct: 2717 SQPGMLLDSWSRMVKSLNVSSSVNQASRLIDGSEPCWQSSGS 2758
Score = 38 (18.4 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 152 SVATEVFSWGSGANYQLG 169
SV T + WGS + +G
Sbjct: 2594 SVTTPKYKWGSVTHQSVG 2611
Score = 38 (18.4 bits), Expect = 1.8e-20, Sum P(4) = 1.8e-20
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 703 ALRKKLQQIE-MLEVKLSNGHILDEQQIAKLQTKSVLERSLAELGV--PIELPQAIAASA 759
+L K L +E L + + HIL QI + + + +L G+ P+E P + ++SA
Sbjct: 3323 SLAKILLSLEGNLAKQQALSHILTALQI--MYARDAVVGALMPAGMLAPVECP-SFSSSA 3379
Query: 760 ASPD 763
+ D
Sbjct: 3380 PASD 3383
Score = 38 (18.4 bits), Expect = 2.5e-19, Sum P(4) = 2.5e-19
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 449 WTAAVTATGDVYMW 462
WT + +G +Y W
Sbjct: 3889 WTLSAGGSGTIYGW 3902
Score = 38 (18.4 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 4675 PRTIADFRGRDFVIQVLDKYN 4695
Score = 37 (18.1 bits), Expect = 7.3e-20, Sum P(4) = 7.3e-20
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ ++ + + G +HCL+ S
Sbjct: 3978 SIQHVFIKKVAVNSGGKHCLALS 4000
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 339 (124.4 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 98/330 (29%), Positives = 161/330 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQT-LFAVTADGKLYATGYG 4014
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + ++V + KH L++EG EV++WG
Sbjct: 4015 AGGRLGI------GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG-EVYSWGE 4067
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ ++++ VAA H+A V+ +G+++TWG R G+LG+
Sbjct: 4068 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4127
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
S+S P++VE+L+G ++ +A T+ L DG+ + R
Sbjct: 4128 --SDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4185
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 4186 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4245
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G+ V++I+ G T G+VY W
Sbjct: 4246 QGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
Score = 323 (118.8 bits), Expect = 2.6e-19, Sum P(4) = 2.6e-19
Identities = 99/335 (29%), Positives = 160/335 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
++ T+VF WG QLG K+P ++L + ++ AVT G+VY+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA---AKHHTVLATEGGEV 268
G GRLG + SG + PR++T+ L S VK +A +H T L +G +V
Sbjct: 3017 CGEATNGRLG---LGMSSGTVPI--PRQITA-LSSYVVKKVAVHSGGRHATALTVDG-KV 3069
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVVSESGEVFTWGCNRE 327
F+WG +G+LG+ S PR + +LK K I +A + H+A ++ SGE++TWG
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA------RNLK 381
G+LG+G ++ + P++V+ L G ++ VA L E ++ + L
Sbjct: 3130 GRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187
Query: 382 KSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWAS---------SDPDLR 428
+ GS + I +L+ V I G S ALT+ G ++ W SD +R
Sbjct: 3188 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3247
Query: 429 CQQLYS-MCGRNVVSISAGKYWTAAVTATGDVYMW 462
Q+ + G+ +V ++ G AVT +G VY W
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282
Score = 306 (112.8 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 82/254 (32%), Positives = 133/254 (52%)
Query: 189 VIKLISAAK-FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
++K+ + + H +A+ + GEVY+WG G GGRLGH D + + VI+ + +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLEEPKVISA--FSGKQAGK 552
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVA-- 304
V IA ++ T GE++TWG G+LG+ S + + P V+ LK LK+I VA
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+ + T V+E+G+V++WG G+LG G S+ TP+++E L+ D++ V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDVIKVRCGSQFS 670
Query: 365 IVLGADGERVIVAR-NLKKSGSTPLKFHRKIKL-------HVVSIAAGMVHSTALTEDGA 416
I L DG+ + + ++ G + R KL V+ +AAG H ALTED
Sbjct: 671 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 417 LFYWASSDPDLRCQ 430
+ W S+D +CQ
Sbjct: 731 VHSWGSND---QCQ 741
Score = 304 (112.1 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 72/220 (32%), Positives = 113/220 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV+SWG + +LG GN P ++SL G + ++A HS VT+ G++YTWG G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV IA T+ T+ V++WG
Sbjct: 4121 RYGRLGHSDSEDQ------LKPKLVEA-LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4173
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 4174 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4233
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+ + PR V+ L+GK ++ +A H + DGE
Sbjct: 4234 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271
Score = 291 (107.5 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 80/245 (32%), Positives = 123/245 (50%)
Query: 129 CKSRTPVDLLSG-PVLQVVGSGYNSV----ATEVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ V G +S A ++++WG G +LG ++ Q P V+
Sbjct: 4081 CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 4140
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G VI + + ++ +T V++WG G G+LG G P ++
Sbjct: 4141 ALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR------GGSDGCKVPMKID 4194
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S G VK + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 4195 SLTGLGVVK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4253
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA 360
IA+A + H +E GEV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 4254 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKVNRVACG 4311
Query: 361 KYHTI 365
HT+
Sbjct: 4312 SAHTL 4316
Score = 286 (105.7 bits), Expect = 2.4e-18, Sum P(4) = 2.4e-18
Identities = 77/236 (32%), Positives = 122/236 (51%)
Query: 147 GSGYNSVAT--EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHG-----FVIKLISAAKFH 199
G Y ++A EV+SWG G +LG G+ + P + + G V+ I+ +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTY 563
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH-- 257
S A+T+ GE+YTWG G GRLGH S A+ P V +GL +V +A
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGS----SEDEAI--PMLV-AGLKGLKVIDVACGSGDA 616
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
T+ TE G+V++WG G+LG D TP+ + L+ L +I V ++ + +++
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD 676
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+V++WG +LG+GT Y P+++E L+GK ++ VAA H + L D E
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHV-RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Score = 276 (102.2 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 82/301 (27%), Positives = 148/301 (49%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V+S G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H+ A+T G+V++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 3107
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE++TWG G+LG+ TQ P+ V L ++I VA ++ T
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 372 ERVIVARN----LKKSGSTPLKFHRKIK-LH---VVSIAAGMVHSTALTEDGALFYWASS 423
+ L ++ + ++ L +V +A G +H A+T+ G ++ W +
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 424 D 424
D
Sbjct: 3286 D 3286
Score = 273 (101.2 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 71/162 (43%), Positives = 92/162 (56%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL G V+K+ ++F SVA+T G VYTWG G
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWGKG 4226
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
RLGH D H V PR+V GL ++V IA H V TE GEV+TWG N
Sbjct: 4227 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
EGQLG + + PR V++L+ K+ VA + HT S S
Sbjct: 4280 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321
Score = 273 (101.2 bits), Expect = 4.5e-14, Sum P(4) = 4.5e-14
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V +VFSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 3064 TVDGKVFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+YTWG G GRLGH D + P+ V LG R ++ ++ LA T+ G
Sbjct: 3120 ELYTWGLGEYGRLGHGD------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+G+ P+VVE L+GK +V VA H + + G+ N + G
Sbjct: 3234 DYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 3292 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 225 (84.3 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 69/232 (29%), Positives = 112/232 (48%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEG 265
G +Y WG+ G+LG I + V TP + L R V+ I + T+ A T
Sbjct: 3954 GTIYGWGHNHRGQLG----GIEGAKVKVPTPCEALATL--RPVQLIGGEQ--TLFAVTAD 4005
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTW 322
G+++ G G+LG ++ TP + S++ +K +AV + KH +S GEV++W
Sbjct: 4006 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4065
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LK 381
G +G+LG+G + PRV+ESL+G ++V VAA H+ + A G+ +
Sbjct: 4066 GEAEDGKLGHGNRSPCDR--PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 382 KSGSTPLKFHRKIKL------H-VVSIAAGM--VHSTALTEDGALFYWASSD 424
+ G + + K KL H V+ IA G + LT+D ++ W D
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Score = 222 (83.2 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 64/219 (29%), Positives = 109/219 (49%)
Query: 147 GSGYNSVAT---EVFSWGSGANY-QLGTGNAHLQKLPCKVDSLHGF-VIKLI-SAAKFHS 200
GS Y++ T E+++WG G NY +LG G++ + +P V L G VI + + +
Sbjct: 560 GSTYSAAITAEGELYTWGRG-NYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQT 618
Query: 201 VAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV 260
+AVT G+V++WG G G+LG G TP+ + L V + ++
Sbjct: 619 LAVTENGQVWSWGDGDYGKLGR------GGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSI 671
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEV 319
T+ G+V++WG +LG+ + + P+ + L+ K+I VAA + H ++E EV
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 320 FTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
+WG N + Q + T + P + L K +VG+A
Sbjct: 732 HSWGSNDQCQ-HFDTLR-VTKPEPTALPGLDSKHIVGIA 768
Score = 192 (72.6 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 54/165 (32%), Positives = 81/165 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGY 214
+V+SWG G +LG G + K P ++ L VIK+ ++F S+A+T G+VY+WG
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF-SIALTKDGQVYSWGK 684
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G RLGH G + ++ GL ++V +AA H + TE EV +WGSN
Sbjct: 685 GDNQRLGH-------GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 275 REGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGE 318
+ Q T T+P P + L K I+ +A + S E
Sbjct: 738 DQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWSSCSE 782
Score = 144 (55.7 bits), Expect = 0.00076, Sum P(4) = 0.00075
Identities = 54/210 (25%), Positives = 94/210 (44%)
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
A VI P + GL S V +A A+ ++ + G V+T N + P+
Sbjct: 438 ANVIGPIQC-EGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD----------MLAPQ 486
Query: 292 RVSSLKLK-IIAVAAANK--HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 348
V L + I+ +AA + H ++ +GEV++WGC G+LG+G + P+V+ +
Sbjct: 487 LVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEE--PKVISA 544
Query: 349 LKGKD----LVGVAAAKYHTIVLGADGERVIVAR-NLKKSG-------STPLKFHRKIKL 396
GK +V +A ++ + A+GE R N + G + P+ L
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 397 HVVSIAAGM--VHSTALTEDGALFYWASSD 424
V+ +A G + A+TE+G ++ W D
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Score = 142 (55.0 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESG 317
T+ A G ++ WG N GQLG P +L L+ + + + V+ G
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVI 375
+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 4007 KLYATGYGAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4064
Query: 376 VAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ + VV +AAG HS +T G L+ W
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Score = 125 (49.1 bits), Expect = 6.5e-08, Sum P(5) = 6.5e-08
Identities = 47/170 (27%), Positives = 70/170 (41%)
Query: 262 ATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVF 320
AT +VF WG N + QLG P +L L ++ VA +K V+ G+V+
Sbjct: 2956 ATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 321 TWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVIVAR 378
+ G G+LG G S S + PR + +L + V V + H L DG+
Sbjct: 3016 SCGEATNGRLGLGMS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGE 3074
Query: 379 -------NLKKSGSTPLKFHRKIKL-HVVSIAAGMVHSTALTEDGALFYW 420
+ + + +K + IA G HS ALT G L+ W
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Score = 109 (43.4 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 43/160 (26%), Positives = 69/160 (43%)
Query: 127 EDCKSRTPVDLLSG-PVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCK 181
+ CK+ ++ L V++V GS ++ T +V+SWG G N +LG G + P
Sbjct: 644 DGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL 703
Query: 182 VDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
++ L G + ++A H +A+T EV++WG + H FD V P
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQH--FDT----LRVTKPEPTA 755
Query: 242 -SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG 280
GL S+ + IA + F W S E +G
Sbjct: 756 LPGLDSKHIVGIACGP---------AQSFAWSSCSEWSIG 786
Score = 77 (32.2 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V++WG + Q G G + + P V L G I ++ HSVA T++
Sbjct: 3278 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3328
Score = 67 (28.6 bits), Expect = 1.9e-20, Sum P(4) = 1.9e-20
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGK-------KSKD----NPPLVTRLH 478
Q + + G+ V I G ++ A+T +G V+ W GK D P +V L
Sbjct: 3198 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTW-GKGDYFRLGHGSDVHVRKPQVVEGLR 3256
Query: 479 GIKKATSVSVGETHLLIV---GSLY 500
G KK V+VG H L V G +Y
Sbjct: 3257 G-KKIVHVAVGALHCLAVTDSGQVY 3280
Score = 45 (20.9 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 29/118 (24%), Positives = 43/118 (36%)
Query: 944 GKVLLSSFMTSKPI---PVVSARAQ-QATDGDKSTPP---WAASGT-PPSLSRPSLRNIQ 995
G+ LLS + I P V Q DG ++P + G PP + L +
Sbjct: 2330 GRALLSHQDKLRQILSQPAVQGTGTLQTDDGAAASPDLGDMSPEGPQPPMILLQQLLSSA 2389
Query: 996 MQQGKQHCLSHSPKTRTAGFSI----APSQGSPSDSPGMNRWFKPEAETPSSIRSIQM 1049
Q + + A ++ A PS SPG EA TP S++ I +
Sbjct: 2390 TQPSPVKAIFDKQELEAAALALCQCLAVESTHPS-SPGCEDCSSSEATTPVSVQHIHL 2446
Score = 43 (20.2 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 980 SGTPPSLSRPSLRNIQMQQGKQ 1001
+G PS+ +LR I + QGK+
Sbjct: 4378 TGLGPSVGFDTLRGILISQGKE 4399
Score = 39 (18.8 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 1016 SIAPSQGSPSDSPGMNRWFKPEAETPSSIRSI-QMEEKAMKDLK 1058
++ PS +PS +R F P + P + I + K +D++
Sbjct: 3480 AVTPSAVTPSAPSASSRPFIPVTDDPGAASIIAETMTKTKEDVE 3523
Score = 39 (18.8 bits), Expect = 6.6e-19, Sum P(3) = 6.6e-19
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 942 SEGKVLLSSFMTS-KPIPVVSARAQQATDGDKSTPPWAASGT 982
S+ +LL S+ K + V S+ Q + D S P W +SG+
Sbjct: 2774 SQPGMLLDSWSRMVKSLNVSSSVNQASRLIDGSEPCWQSSGS 2815
Score = 38 (18.4 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 152 SVATEVFSWGSGANYQLG 169
SV T + WGS + +G
Sbjct: 2651 SVTTPKYKWGSVTHQSVG 2668
Score = 38 (18.4 bits), Expect = 1.9e-20, Sum P(4) = 1.9e-20
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 703 ALRKKLQQIE-MLEVKLSNGHILDEQQIAKLQTKSVLERSLAELGV--PIELPQAIAASA 759
+L K L +E L + + HIL QI + + + +L G+ P+E P + ++SA
Sbjct: 3380 SLAKILLSLEGNLAKQQALSHILTALQI--MYARDAVVGALMPAGMLAPVECP-SFSSSA 3436
Query: 760 ASPD 763
+ D
Sbjct: 3437 PASD 3440
Score = 38 (18.4 bits), Expect = 2.6e-19, Sum P(4) = 2.6e-19
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 449 WTAAVTATGDVYMW 462
WT + +G +Y W
Sbjct: 3946 WTLSAGGSGTIYGW 3959
Score = 38 (18.4 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 4732 PRTIADFRGRDFVIQVLDKYN 4752
Score = 37 (18.1 bits), Expect = 7.7e-20, Sum P(4) = 7.7e-20
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ ++ + + G +HCL+ S
Sbjct: 4035 SIQHVFIKKVAVNSGGKHCLALS 4057
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 265 (98.3 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 76/238 (31%), Positives = 125/238 (52%)
Query: 122 ASITLEDCKSRTPV---DLLSGPVLQVVGSGYNSVATEVFS-WGSGANYQLGTGNAHLQK 177
+S+TL+ C T + D +S P+ G YN + T+ + + SG TG+ +
Sbjct: 174 SSLTLKSCAKATNMLFNDEISAPIQTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRD 233
Query: 178 --LPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG-HPDFDIHSGQAAV 234
+P ++ L IK I+ HS+A+ LG+VY+WG G GRLG DF I V
Sbjct: 234 VLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSI------V 287
Query: 235 ITPRRVT--SGLGSRRVKT-IAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDT----Q 287
TP ++ + GS + T IAA ++++ G+V+++GSN +LGY D Q
Sbjct: 288 PTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQ 347
Query: 288 PTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRV 345
TP+++ S+ L++ ++A A+ H+ + G V+T G + G+LG S+ +S Y RV
Sbjct: 348 STPKKIPSI-LQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERV 404
Score = 227 (85.0 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 72/235 (30%), Positives = 115/235 (48%)
Query: 156 EVFSWGSGANYQLGTGNAH-LQKLPCKVDSLHGF----VIKLISAAKFHSVAVTSLGEVY 210
+V+SWG+GA+ +LG GN + P + ++ F + I+A +S+ + S G+VY
Sbjct: 266 QVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVY 325
Query: 211 TWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
++G +LG+ + D G + TP+++ S L ++K+IA A H+V G V+T
Sbjct: 326 SFGSNLHYKLGYKECDGALGFQS--TPKKIPSIL---QMKSIACASWHSVFLDLKGRVYT 380
Query: 271 WGSNREGQLGYT-SVDTQPTPRRVSSLKLK----------IIAVAAANKHTAVVSESGEV 319
GS+ G+LG S + P RVS K I +A T V+SESG +
Sbjct: 381 CGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSL 440
Query: 320 FTWGCNREGQLGYGTSNSASNY--TPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
++WG N + QLG S Y P++V +L + A H + L GE
Sbjct: 441 YSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGE 495
Score = 219 (82.2 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 73/251 (29%), Positives = 120/251 (47%)
Query: 156 EVFSWGSGANYQLG----TGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
+V+S+GS +Y+LG G Q P K+ S+ +K I+ A +HSV + G VYT
Sbjct: 323 DVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSI--LQMKSIACASWHSVFLDLKGRVYT 380
Query: 212 WGYGRGGRLGHP--DFDIHSGQAAVITPRRVTSGLGSRRV-KTIAAAKHHTVLATEGGEV 268
G GRLG + + IT + L V K IA + T + +E G +
Sbjct: 381 CGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSL 440
Query: 269 FTWGSNREGQLGYTSV----DTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWG 323
++WG N + QLG ++ + P+ V++L I + A ++H +S+ GEVF +G
Sbjct: 441 YSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCYG 500
Query: 324 CNREGQLGYG-TSNSASNYTPRVVESLKGK-DLVG------VAAAKYHTIV-LGAD---- 370
N Q G+G N N T +E+ ++G V+A +T++ L +D
Sbjct: 501 DNSTLQCGFGEVLNFEINLTKVKIETTSSDAPIIGGGGVFKVSAGGSNTMISLSSDHNIF 560
Query: 371 GERVIVARNLK 381
GE ++ + NL+
Sbjct: 561 GEELLKSLNLQ 571
Score = 201 (75.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 66/288 (22%), Positives = 134/288 (46%)
Query: 98 GWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATEV 157
G + LH + ++ +L+ G +L+D ++ T +D+ + + + T +
Sbjct: 98 GETPLHVSSISNNIEFMKLLVLQGVDGSLKDNRNMTALDIAVMMDHKTIIKELKKLKTSM 157
Query: 158 FSWGSGANYQLG---TGNAHLQKLPCKVDSLHGFVIKLISAAKF---HSVAVTSLGEVYT 211
+ + YQ G T + L+ + L I +F +++ +T G VY+
Sbjct: 158 MTMEQTSIYQWGQILTSSLTLKSCAKATNMLFNDEISAPIQTEFGQNYNLILTDTGAVYS 217
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
G G+ GH + V+ P ++ L ++R+K+IA HH++ + G+V++W
Sbjct: 218 SGLCSYGKTGHKK------KRDVLIPTQILE-LSNKRIKSIACGTHHSLAMDDLGQVYSW 270
Query: 272 GSNREGQLGY-TSVDTQPTPRRVSSLKL----KII-AVAAANKHTAVVSESGEVFTWGCN 325
G+ G+LG PTP +S + +I A+AA ++ ++ +G+V+++G N
Sbjct: 271 GNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSN 330
Query: 326 REGQLGYGTSNSASNY--TPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+LGY + A + TP+ + S+ + +A A +H++ L G
Sbjct: 331 LHYKLGYKECDGALGFQSTPKKIPSIL--QMKSIACASWHSVFLDLKG 376
Score = 75 (31.5 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 49 LLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHF 108
LL++N +N N +G TPLH + N + ++ L+ G D +D + ++L A+
Sbjct: 83 LLEENIELLNLPNSYGETPLHVSSISNNIEFMKLLVLQGVDGSLKDNRN-MTALDIAVMM 141
Query: 109 GHLAVASVLLQSGASI-TLE 127
H + L + S+ T+E
Sbjct: 142 DHKTIIKELKKLKTSMMTME 161
Score = 56 (24.8 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 372 ERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW 420
ERV + N K +G+ P + IK IA G +T L+E G+L+ W
Sbjct: 402 ERVSIT-NSKTNGTLPQE--EVIK----QIACGTNFTTVLSESGSLYSW 443
Score = 47 (21.6 bits), Expect = 2.6e-21, Sum P(3) = 2.6e-21
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 440 VVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKK 482
+ I+ G +T ++ +G +Y W G +K L+ L GI +
Sbjct: 421 IKQIACGTNFTTVLSESGSLYSW-GVNTKSQLGLIN-LVGISE 461
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 296 (109.3 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 96/328 (29%), Positives = 155/328 (47%)
Query: 160 WGSGANYQLGTGNAHLQKLPCKVDSLHGFV----IKLISAAKFHSVAVTSLGEVYTWGYG 215
WG + Q G G+ +LQ + ++GF+ +K ++ HSV + GEVYT G
Sbjct: 4 WGYSSFGQPGIGS-NLQVI-IPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
G+LGH G P V + L + + +A + H+V ++ G+VF+WG+
Sbjct: 62 TKGQLGHES----EGSK----PAWVGT-LAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112
Query: 276 EGQLGYTSVDTQPT-PRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
+GQLG T+++ T PR + L + I+ ++ N H ++ G+ FTWG N GQLG G
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRK 393
S +P+ V+SL G L VAA H+ L G + SG L R
Sbjct: 173 -KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSG--AVFGWGKNSSGQLGLSDERD 229
Query: 394 ------IKL----HVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQLY 433
+KL VV I+ G H+ LT+ G +F + S + ++ +++
Sbjct: 230 RESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289
Query: 434 SMCGRNVVSISAGKYWTAA-VTATGDVY 460
+ G V I+ G++ T A V ++G +Y
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIY 317
Score = 268 (99.4 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 72/218 (33%), Positives = 111/218 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV++ G QLG + + P V +L G I ++ + HSVA++ G+V++WG G
Sbjct: 54 EVYTCGLNTKGQLGHESEGSK--PAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAG 111
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
G+LG + + + AV PR + L + + I+ H + G+ FTWG N
Sbjct: 112 SDGQLG-----LTTIEDAVTVPRLIKK-LNQQTILQISCGNWHCLALAADGQFFTWGQNS 165
Query: 276 EGQLGY-TSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
GQLG +Q +P+RV SL + + VAA H+ +S SG VF WG N GQLG
Sbjct: 166 YGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL- 224
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
S+ +P V+ L+ + +V ++ + HT VL G
Sbjct: 225 -SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSG 261
Score = 254 (94.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 85/282 (30%), Positives = 134/282 (47%)
Query: 125 TLEDCKS--RTPVDLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGN-AHLQK 177
T+ED + R L +LQ+ ++ +A + F+WG + QLG G Q
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQA 179
Query: 178 LPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITP 237
P +V SL G + ++A HS A++ G V+ WG G+LG D + +P
Sbjct: 180 SPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSD------ERDRESP 233
Query: 238 RRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK 297
V L S++V I+ + HT + T+ G VFT+G+ GQLG+ S++ + PRRV L
Sbjct: 234 CHVKL-LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELM 292
Query: 298 -LKIIAVAAANKHT-AVVSESGEVFTWGCNREGQLGYGTSNSASNYTP-RVVESLKGKDL 354
++ +A HT A V SG ++ +GC GQLG G + + +P + + L
Sbjct: 293 GSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQL 352
Query: 355 VGVA-AAKYHTIV-LGADGERVIVARNLKKSGSTPLKFHRKI 394
G A KYH + + + G++ V + K S P R I
Sbjct: 353 SGKPDACKYHIVKHIFSGGDQTFVLCS-KYENSLPADDFRTI 393
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 295 (108.9 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 81/260 (31%), Positives = 138/260 (53%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQ-KLPCKVDSLHGFVIKLISAA 196
++Q+ Y+S+A E+F+WG + QLG G P V++L G + ISA
Sbjct: 150 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 209
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
+ HS+A++ G VY+WG G+LG H+ +P + + L ++V+ +A
Sbjct: 210 EAHSMALSMSGNVYSWGRNDCGQLGLG----HTYNKE--SPSCIEA-LDDQKVEFLACGG 262
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHT-AVVS 314
HT L T+ G VFT+G + GQLG+ S + PR V+ L ++ +A +HT A VS
Sbjct: 263 CHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVS 322
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
++G+VF++G +EGQLG G + + PR ++ L ++L ++ +++ A G +
Sbjct: 323 DTGKVFSFGSGKEGQLGNG--GTRNQLIPRPMKLLSSEELKSESSTSVKELIMVAGGNQS 380
Query: 375 IVARNLKKSGSTPLKFHRKI 394
I+ K++ L+ RKI
Sbjct: 381 ILIWMEKENSYVNLR--RKI 398
Score = 216 (81.1 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 64/201 (31%), Positives = 108/201 (53%)
Query: 133 TP--VDLLSG-PVLQV-VGSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSL 185
TP V+ LSG P++Q+ G ++ S++ V+SWG QLG G+ + ++ P +++L
Sbjct: 191 TPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEAL 250
Query: 186 HGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLG 245
++ ++ H+ +T G V+T+G G+ G+LGH +S Q + PR VT GL
Sbjct: 251 DDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGH-----NSTQNE-LRPRLVT-GLV 303
Query: 246 SRRVKTIAAAKHHTVL-ATEGGEVFTWGSNREGQLGYTSVDTQ--PTPRRV-SSLKLKII 301
RV IA + HT+ ++ G+VF++GS +EGQLG Q P P ++ SS +LK
Sbjct: 304 GNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSE 363
Query: 302 AVAAANKHTAVVSESGEVFTW 322
+ + + V + + W
Sbjct: 364 SSTSVKELIMVAGGNQSILIW 384
Score = 153 (58.9 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 52/200 (26%), Positives = 85/200 (42%)
Query: 227 IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDT 286
+ G A V + G+R+ K I K + + + GE + +G+
Sbjct: 77 LERGGAGVEVHQLPAGSDGARKPKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSI 136
Query: 287 QPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVV 346
+ + + II + + H+ +S+ GE+F WG N +GQLG G AS TP +V
Sbjct: 137 EHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRI-FASTSTPEIV 195
Query: 347 ESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSG-------STPLKFHRKIKLHV 398
E+L G LV ++A + H++ L G RN + G +P V
Sbjct: 196 ENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKV 255
Query: 399 VSIAAGMVHSTALTEDGALF 418
+A G H+ LT+ G +F
Sbjct: 256 EFLACGGCHTALLTKSGLVF 275
Score = 63 (27.2 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 401 IAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQLYSMCGRNVVSISAGKYWT 450
+A G H+ LT+ G +F + S+ +LR + + + G V I+ G+ T
Sbjct: 258 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHT 317
Query: 451 AA-VTATGDVYMW-DGKKSK 468
A V+ TG V+ + GK+ +
Sbjct: 318 LAYVSDTGKVFSFGSGKEGQ 337
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 294 (108.6 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 82/267 (30%), Positives = 127/267 (47%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGR 216
V S G + QLG + P ++ +L + L+S K HS+AV G V+ WG
Sbjct: 44 VQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAAS 103
Query: 217 GGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE 276
G+LG +F + P+++ + G + ++ +A +H+V +E G+VF+WG+N
Sbjct: 104 EGQLGIGEF-----KETTFIPKKIKTLAGIKIIQ-VACGHYHSVALSEDGQVFSWGTNSH 157
Query: 277 GQLGY-TSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGT 334
GQLG +Q +P+RV SL+ + + VAA H+ +S SG F WG N GQL
Sbjct: 158 GQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSG 217
Query: 335 SNS-ASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSGSTPLKFHR 392
+N+ Y P + +LK +V ++ HT VL DG+ N + G P R
Sbjct: 218 NNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKR 277
Query: 393 KIKLHVVSIAAGMVHSTALTEDGALFY 419
+L V G+V D L Y
Sbjct: 278 GPQL--VERIEGLVSQIDCGSDHTLAY 302
Score = 279 (103.3 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 81/242 (33%), Positives = 121/242 (50%)
Query: 192 LISAA--KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRV 249
L+ AA + HS+ + S G V + G G+LG G P R+ + L + V
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGR------KGTPRGEQPERIPA-LETLNV 77
Query: 250 KTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV-DTQPTPRRVSSLK-LKIIAVAAAN 307
++ K H++ G VF WG+ EGQLG +T P+++ +L +KII VA +
Sbjct: 78 ALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGH 137
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
H+ +SE G+VF+WG N GQLG G S +P+ V SL+G L VAA +H+ L
Sbjct: 138 YHSVALSEDGQVFSWGTNSHGQLGLG-KEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL 196
Query: 368 GADGERVIVARN----LKKSGST-PLKFHRKIK------LHVVSIAAGMVHSTALTEDGA 416
G N L SG+ P++ ++ + L VVSI+ G H+ LT+DG
Sbjct: 197 SLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGK 256
Query: 417 LF 418
+F
Sbjct: 257 VF 258
Score = 230 (86.0 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 61/205 (29%), Positives = 99/205 (48%)
Query: 229 SGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQP 288
+G + R+V +G G+ ++ A+ +HH++L G V + G N GQLG
Sbjct: 7 AGGRRPLRERQVCAG-GNTLLQA-ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE 64
Query: 289 TPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE 347
P R+ +L+ L + V+ +H+ V G VF WG EGQLG G + + P+ ++
Sbjct: 65 QPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETT-FIPKKIK 123
Query: 348 SLKGKDLVGVAAAKYHTIVLGADGERVIVARN------LKK---SGSTPLKFHRKIKLHV 398
+L G ++ VA YH++ L DG+ N L K S ++P + + +
Sbjct: 124 TLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPL 183
Query: 399 VSIAAGMVHSTALTEDGALFYWASS 423
+AAG HS AL+ G F W S+
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSN 208
Score = 211 (79.3 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 60/197 (30%), Positives = 100/197 (50%)
Query: 135 VDLLSG-PVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAH-LQKLPCKVDSLHGF 188
+ L+G ++QV Y+SVA +VFSWG+ ++ QLG G Q P +V SL G
Sbjct: 122 IKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSG-LGSR 247
+ ++A HS A++ G + WG G+L + A V + V+ G L +
Sbjct: 182 PLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLA-----LSGNNAPVQRYKPVSIGALKTL 236
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
V +I+ HT + T+ G+VFT+G N GQLG+ + P+ V ++ + + +
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGS 296
Query: 308 KHT-AVVSESGEVFTWG 323
HT A + +G+V ++G
Sbjct: 297 DHTLAYIYTTGQVVSFG 313
Score = 134 (52.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 52/221 (23%), Positives = 96/221 (43%)
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGY-GTSNSASNYTPRVVESLKGKDLVGVA 358
++ A+ H+ ++ G V + G N GQLG GT P + +L+ ++ V+
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQ---PERIPALETLNVALVS 81
Query: 359 AAKYHTIVL---------GADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHST 409
K H++ + GA E + K++ P K + ++ +A G HS
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSV 141
Query: 410 ALTEDGALFYWASSD----------PDLRC-QQLYSMCGRNVVSISAGKYWTAAVTATGD 458
AL+EDG +F W ++ P Q++ S+ G + ++AG + + A++ +G
Sbjct: 142 ALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 459 VYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLIVGSL 499
+ W G S L +++ VS+G L V S+
Sbjct: 202 SFGW-GSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSI 241
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 341 (125.1 bits), Expect = 2.1e-21, Sum P(4) = 2.1e-21
Identities = 100/330 (30%), Positives = 161/330 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 3957 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQT-LFAVTADGKLYATGYG 4015
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + ++V + KH L++EG EV++WG
Sbjct: 4016 AGGRLGI------GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG-EVYSWGE 4068
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ ++++ VAA H+A V+ +G+++TWG R G+LG+
Sbjct: 4069 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4128
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
S+S P++VE+L+G +V VA T+ L DG+ + R
Sbjct: 4129 --SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4186
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 4187 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4246
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G+ V++I+ G T G+VY W
Sbjct: 4247 QGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4276
Score = 329 (120.9 bits), Expect = 3.8e-20, Sum P(4) = 3.8e-20
Identities = 104/351 (29%), Positives = 165/351 (47%)
Query: 139 SGPVLQVVGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISA 195
SG +++ +G S AT +VF WG QLG K+P ++L + ++
Sbjct: 2941 SGSLIRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAG 3000
Query: 196 AKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA- 254
AVT G+VY G GRLG + SG + PR++T+ L S VK +A
Sbjct: 3001 GSKSLFAVTVEGKVYACGEATNGRLG---LGLSSGTVPI--PRQITA-LSSYVVKKVAVH 3054
Query: 255 --AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTA 311
+H T L +G +VF+WG +G+LG+ S PR + +LK K I +A + H+A
Sbjct: 3055 SGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
++ SGE++TWG G+LG+G ++ + P++V+ L G ++ VA L
Sbjct: 3114 ALTSSGELYTWGLGEYGRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171
Query: 372 ERVIVA------RNLKKSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWA 421
E ++ + L + GS + I +L+ V I G S ALT+ G ++ W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3231
Query: 422 S---------SDPDLRCQQLYS-MCGRNVVSISAGKYWTAAVTATGDVYMW 462
SD +R Q+ + G+ +V ++ G AVT G VY W
Sbjct: 3232 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282
Score = 307 (113.1 bits), Expect = 6.9e-22, Sum P(3) = 6.9e-22
Identities = 83/254 (32%), Positives = 133/254 (52%)
Query: 189 VIKLISAAK-FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
++K+ + + H +A+ + GEVY+WG G GGRLGH D + + VI+ + +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLEEPKVISA--FSGKQAGK 552
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVA-- 304
V IA ++ T GE++TWG G+LG+ S + + P V+ LK LK+I VA
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+ + T V+E+G+V++WG G+LG G S+ TP+++E L+ D+V V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDVVKVRCGSQFS 670
Query: 365 IVLGADGERVIVAR-NLKKSGSTPLKFHRKIKL-------HVVSIAAGMVHSTALTEDGA 416
I L DG+ + + ++ G + R KL V+ +AAG H ALTED
Sbjct: 671 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 417 LFYWASSDPDLRCQ 430
+ W S+D +CQ
Sbjct: 731 VHSWGSND---QCQ 741
Score = 304 (112.1 bits), Expect = 1.6e-17, Sum P(4) = 1.6e-17
Identities = 71/220 (32%), Positives = 113/220 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV+SWG + +LG GN P ++SL G + ++A HS VT+ G++YTWG G
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV +A T+ T+ V++WG
Sbjct: 4122 RYGRLGHSDSEDQ------LKPKLVEA-LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4174
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 4175 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4234
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+ + PR V+ L+GK ++ +A H + DGE
Sbjct: 4235 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272
Score = 289 (106.8 bits), Expect = 4.1e-17, Sum P(3) = 4.1e-17
Identities = 79/245 (32%), Positives = 123/245 (50%)
Query: 129 CKSRTPVDLLSG-PVLQVVGSGYNSV----ATEVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ V G +S A ++++WG G +LG ++ Q P V+
Sbjct: 4082 CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 4141
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G V+ + + ++ +T V++WG G G+LG G P ++
Sbjct: 4142 ALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR------GGSDGCKVPMKID 4195
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S G VK + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 4196 SLTGLGVVK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4254
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA 360
IA+A + H +E GEV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 4255 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKVNRVACG 4312
Query: 361 KYHTI 365
HT+
Sbjct: 4313 SAHTL 4317
Score = 285 (105.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 76/236 (32%), Positives = 122/236 (51%)
Query: 147 GSGYNSVAT--EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHG-----FVIKLISAAKFH 199
G Y ++A EV+SWG G +LG G+ + P + + G V+ I+ +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTY 563
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH-- 257
S A+T+ GE+YTWG G GRLGH S A+ P V +GL +V +A
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGS----SEDEAI--PMLV-AGLKGLKVIDVACGSGDA 616
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
T+ TE G+V++WG G+LG D TP+ + L+ L ++ V ++ + +++
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD 676
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+V++WG +LG+GT Y P+++E L+GK ++ VAA H + L D E
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHV-RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Score = 273 (101.2 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 71/162 (43%), Positives = 92/162 (56%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL G V+K+ ++F SVA+T G VYTWG G
Sbjct: 4169 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWGKG 4227
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
RLGH D H V PR+V GL ++V IA H V TE GEV+TWG N
Sbjct: 4228 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
EGQLG + + PR V++L+ K+ VA + HT S S
Sbjct: 4281 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4322
Score = 271 (100.5 bits), Expect = 4.6e-14, Sum P(4) = 4.6e-14
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V +VFSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 3064 TVDGKVFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+YTWG G GRLGH D + P+ V LG R ++ ++ LA T+ G
Sbjct: 3120 ELYTWGLGEYGRLGHGD------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3173
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 3174 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+G+ P+VVE L+GK +V VA H + + G+ N + G
Sbjct: 3234 DYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 3292 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 271 (100.5 bits), Expect = 4.6e-14, Sum P(4) = 4.6e-14
Identities = 81/301 (26%), Positives = 148/301 (49%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V++ G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H+ A+T G+V++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 3107
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE++TWG G+LG+ TQ P+ V L ++I VA ++ T
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 372 ERVIVARN----LKKSGSTPLKFHRKIK-LH---VVSIAAGMVHSTALTEDGALFYWASS 423
+ L ++ + ++ L +V +A G +H A+T+ G ++ W +
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 424 D 424
D
Sbjct: 3286 D 3286
Score = 225 (84.3 bits), Expect = 2.2e-13, Sum P(4) = 2.2e-13
Identities = 69/232 (29%), Positives = 112/232 (48%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEG 265
G +Y WG+ G+LG I + V TP + L R V+ I + T+ A T
Sbjct: 3955 GTIYGWGHNHRGQLG----GIEGAKVKVPTPCEALATL--RPVQLIGGEQ--TLFAVTAD 4006
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTW 322
G+++ G G+LG ++ TP + S++ +K +AV + KH +S GEV++W
Sbjct: 4007 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4066
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LK 381
G +G+LG+G + PRV+ESL+G ++V VAA H+ + A G+ +
Sbjct: 4067 GEAEDGKLGHGNRSPCDR--PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 382 KSGSTPLKFHRKIKL------H-VVSIAAGM--VHSTALTEDGALFYWASSD 424
+ G + + K KL H VV +A G + LT+D ++ W D
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Score = 221 (82.9 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 64/219 (29%), Positives = 109/219 (49%)
Query: 147 GSGYNSVAT---EVFSWGSGANY-QLGTGNAHLQKLPCKVDSLHGF-VIKLI-SAAKFHS 200
GS Y++ T E+++WG G NY +LG G++ + +P V L G VI + + +
Sbjct: 560 GSTYSAAITAEGELYTWGRG-NYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQT 618
Query: 201 VAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV 260
+AVT G+V++WG G G+LG G TP+ + L V + ++
Sbjct: 619 LAVTENGQVWSWGDGDYGKLGR------GGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSI 671
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEV 319
T+ G+V++WG +LG+ + + P+ + L+ K+I VAA + H ++E EV
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 320 FTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
+WG N + Q + T + P + L K +VG+A
Sbjct: 732 HSWGSNDQCQ-HFDTLR-VTKPEPAALPGLDTKHIVGIA 768
Score = 214 (80.4 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 66/254 (25%), Positives = 113/254 (44%)
Query: 235 ITPRRVTSGLGSRRVKTIAAAK-HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV 293
+ P+ V VK A + HH + GEV++WG G+LG+ P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 294 SSLKLK-----IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 348
S+ K ++ +A + ++A ++ GE++TWG G+LG+G+S + P +V
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA--IPMLVAG 600
Query: 349 LKGKDLVGVAAAK--YHTIVL---G-----ADGERVIVARNLKKSGSTPLKFHRKIKLHV 398
LKG ++ VA T+ + G DG+ + R TP + L V
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 399 VSIAAGMVHSTALTEDGALFYWASSDPD---------LRCQQLYS-MCGRNVVSISAGKY 448
V + G S ALT+DG ++ W D +R +L + G+ V+ ++AG
Sbjct: 661 VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGST 720
Query: 449 WTAAVTATGDVYMW 462
A+T +V+ W
Sbjct: 721 HCLALTEDSEVHSW 734
Score = 192 (72.6 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 53/165 (32%), Positives = 81/165 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGY 214
+V+SWG G +LG G + K P ++ L V+K+ ++F S+A+T G+VY+WG
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF-SIALTKDGQVYSWGK 684
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G RLGH G + ++ GL ++V +AA H + TE EV +WGSN
Sbjct: 685 GDNQRLGH-------GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 275 REGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGE 318
+ Q T T+P P + L K I+ +A + S E
Sbjct: 738 DQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782
Score = 146 (56.5 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 57/210 (27%), Positives = 96/210 (45%)
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
A VI P + GL + V IA A+ ++ + G V+T Y S DT P+
Sbjct: 438 ANVIGPIQC-EGLANLGVTQIACAEKRFLILSRNGRVYTQA--------YNS-DTL-APQ 486
Query: 292 RVSSLKLK-IIAVAAANK--HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 348
V L + I+ +AA + H ++ +GEV++WGC G+LG+G + P+V+ +
Sbjct: 487 LVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEE--PKVISA 544
Query: 349 LKGKD----LVGVAAAKYHTIVLGADGERVIVAR-NLKKSG-------STPLKFHRKIKL 396
GK +V +A ++ + A+GE R N + G + P+ L
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 397 HVVSIAAGM--VHSTALTEDGALFYWASSD 424
V+ +A G + A+TE+G ++ W D
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESG 317
T+ A G ++ WG N GQLG P +L L+ + + + V+ G
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4007
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVI 375
+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 4008 KLYATGYGAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4065
Query: 376 VAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ + VV +AAG HS +T G L+ W
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4118
Score = 105 (42.0 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 42/160 (26%), Positives = 69/160 (43%)
Query: 127 EDCKSRTPVDLLSG-PVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCK 181
+ CK+ ++ L V++V GS ++ T +V+SWG G N +LG G + P
Sbjct: 644 DGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL 703
Query: 182 VDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
++ L G + ++A H +A+T EV++WG + H FD V P
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQH--FDT----LRVTKPEPAA 755
Query: 242 -SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG 280
GL ++ + IA + F W S E +G
Sbjct: 756 LPGLDTKHIVGIACGP---------AQSFAWSSCSEWSIG 786
Score = 80 (33.2 bits), Expect = 2.2e-13, Sum P(4) = 2.2e-13
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
A +V++WG + Q G G + + P V L G I ++ HSVA T++
Sbjct: 3276 AGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTI 3328
Score = 70 (29.7 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 54/231 (23%), Positives = 95/231 (41%)
Query: 288 PTPRR-VSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVV 346
P PR + + KI + A ++H V+ ES ++F ++ QL + ++T
Sbjct: 3895 PLPRLFLDEVAKKIRELMADSEHMDVLHESHDIFKR--EQDEQLVQWMNRRPDDWTL--- 3949
Query: 347 ESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGST-PLKFHRKIKLHVVSIAAGM 405
S G + + + G +G +V V + + P++ + A G
Sbjct: 3950 -SAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGK 4008
Query: 406 VHSTALTEDGALFYWAS---SDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
+++T G L + S P L + + + + V S GK+ A+++ G+VY W
Sbjct: 4009 LYATGYGAGGRLGIGGTESVSTPTL-LESIQHVFIKKVAVNSGGKH-CLALSSEGEVYSW 4066
Query: 463 ----DGK-----KSK-DNPPLVTRLHGIKKATSVSVGETHLLIV---GSLY 500
DGK +S D P ++ L GI+ V+ G H V G LY
Sbjct: 4067 GEAEDGKLGHGNRSPCDRPRVIESLRGIE-VVDVAAGGAHSACVTAAGDLY 4116
Score = 67 (28.6 bits), Expect = 6.9e-22, Sum P(3) = 6.9e-22
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGK-------KSKD----NPPLVTRLH 478
Q + + G+ V I G ++ A+T +G V+ W GK D P +V L
Sbjct: 3198 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTW-GKGDYFRLGHGSDVHVRKPQVVEGLR 3256
Query: 479 GIKKATSVSVGETHLLIV---GSLY 500
G KK V+VG H L V G +Y
Sbjct: 3257 G-KKIVHVAVGALHCLAVTDAGQVY 3280
Score = 43 (20.2 bits), Expect = 6.9e-22, Sum P(3) = 6.9e-22
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 980 SGTPPSLSRPSLRNIQMQQGKQ 1001
+G PS+ +LR I + QGK+
Sbjct: 4379 TGLGPSVGFDTLRGILISQGKE 4400
Score = 42 (19.8 bits), Expect = 4.9e-20, Sum P(4) = 4.9e-20
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 1016 SIAPSQGSPSDSPGMNRWFKPEAETPSSIRSI-QMEEKAMKDLK 1058
++ PS +PS S +R F P + P + I + K +D++
Sbjct: 3481 AVTPSAVTPSASSTSSRPFIPVTDDPGAASIIAETMTKTKEDVE 3524
Score = 40 (19.1 bits), Expect = 5.2e-19, Sum P(3) = 5.2e-19
Identities = 33/138 (23%), Positives = 54/138 (39%)
Query: 882 PKEIALPPPPTPRSEGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGR 941
P E AL P SE P GG A L I ++++ + D+F + + R
Sbjct: 2183 PSEGALLEDYLPDSENPEVGGLM-----AVLAVIGGIDGRLRLGGQVMH-DEFGEGTVTR 2236
Query: 942 --SEGKVLL--SSFMTSKPIPVVSARAQQATDGDKSTPPWAASGTPPSLSR-PSLRNIQM 996
+G++ + S + P+ + A P+ T P LS L N+
Sbjct: 2237 ITPKGRITVQFSDMRMCRVCPLNQLKPLPAVAFSVINLPF----TEPMLSVWAQLVNLAG 2292
Query: 997 QQGKQHCLSHSPKTRTAG 1014
+ ++H + SPK AG
Sbjct: 2293 SKLEKHKVKKSPKQGFAG 2310
Score = 39 (18.8 bits), Expect = 2.1e-21, Sum P(4) = 2.1e-21
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 151 NSVATEVFSWGSGANYQLG 169
+SV T + WGS + +G
Sbjct: 2650 SSVTTPKYKWGSVTHQSVG 2668
Score = 39 (18.8 bits), Expect = 2.1e-21, Sum P(4) = 2.1e-21
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 112 AVASVLLQSGASITLEDCKSR 132
A A +LQSG S+ L + R
Sbjct: 885 AAAQAVLQSGWSVLLPTAEER 905
Score = 39 (18.8 bits), Expect = 5.2e-19, Sum P(3) = 5.2e-19
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 942 SEGKVLLSSFMTS-KPIPVVSARAQQATDGDKSTPPWAASGT 982
S+ +LL S+ K + V S+ Q + D S P W +SG+
Sbjct: 2774 SQPGMLLDSWSRMVKSLNVSSSVNQASRLIDGSEPCWQSSGS 2815
Score = 38 (18.4 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 4733 PRTIADFRGRDFVIQVLDKYN 4753
Score = 37 (18.1 bits), Expect = 1.6e-19, Sum P(4) = 1.6e-19
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ ++ + + G +HCL+ S
Sbjct: 4036 SIQHVFIKKVAVNSGGKHCLALS 4058
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 278 (102.9 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 89/303 (29%), Positives = 132/303 (43%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLG-TGNAHLQKLPCKVDSLHGFVIKLISAA 196
V VV NS+A +F+WG LG + +P +V +L I +
Sbjct: 40 VRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIG 99
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAA---VITPRRVTSGLGSRRVKTIA 253
+H +AV G Y WG G+ G G+ ++ P+R L V+ +A
Sbjct: 100 GWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL---TVRQVA 156
Query: 254 AAKHHTVLATEGGEVFTWGSN-REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTA 311
A H+V+ T G V+TWG G + SV P RV L+ +++IAV A H
Sbjct: 157 AGGTHSVVLTREGHVWTWGQPWPPGDIKQISV-----PVRVQGLENVRLIAVGAF--HNL 209
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+ E G + WG N GQLG G + S+ P V+ L LV +AA +H+ L G
Sbjct: 210 ALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVP--VQGLDDLTLVDIAAGGWHSTALTDKG 267
Query: 372 E----------RVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA 421
E R+ + N K S P K + + ++ ++ G HS ALT DG +F +
Sbjct: 268 EVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFG 327
Query: 422 SSD 424
D
Sbjct: 328 RGD 330
Score = 266 (98.7 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 90/337 (26%), Positives = 150/337 (44%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
AT + +WGSG + QLG G ++ C V++L + ++ + + +S+A+ G ++TWG
Sbjct: 4 ATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG 63
Query: 214 YGRGGRLGH-PDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG 272
+ + G LGH P+ + P RV + L + ++ A H + + G + WG
Sbjct: 64 WNQRGTLGHQPETKTEN------IPSRVKA-LANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 273 SNREGQLGYTSVDTQ---PT------PRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWG 323
N GQ G + + P P+R + KL + VAA H+ V++ G V+TWG
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAP-KLTVRQVAAGGTHSVVLTREGHVWTWG 175
Query: 324 CNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN---L 380
G S P V+ L+ L+ V A +H + L DG + N
Sbjct: 176 ----QPWPPGDIKQIS--VPVRVQGLENVRLIAVGA--FHNLALEEDGRLLAWGNNEYGQ 227
Query: 381 KKSGST-----PLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASS--------DPDL 427
+G T P+ L +V IAAG HSTALT+ G ++ W D D
Sbjct: 228 LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDK 287
Query: 428 RC----QQLYSMCGRNVVSISAGKYWTAAVTATGDVY 460
Q++ + +++ +S G + A+T G ++
Sbjct: 288 SSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIF 324
Score = 195 (73.7 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 58/199 (29%), Positives = 91/199 (45%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAK 197
V QV G +SV V++WG G+ +P +V L ++LI+
Sbjct: 152 VRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLEN--VRLIAVGA 205
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
FH++A+ G + WG G+LG D S V GL + IAA
Sbjct: 206 FHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPV-------QGLDDLTLVDIAAGGW 258
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVD--TQPTPRRVSSLKLK-IIAVAAANKHTAVVS 314
H+ T+ GEV+ WG G+LG D ++ P++V+ L + II V+ H+ ++
Sbjct: 259 HSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALT 318
Query: 315 ESGEVFTWGCNREGQLGYG 333
G +F++G G+LGYG
Sbjct: 319 RDGRIFSFGRGDHGRLGYG 337
Score = 191 (72.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 54/171 (31%), Positives = 80/171 (46%)
Query: 143 LQVVGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFH 199
L VG+ +N E + +WG+ QLGTG+ P V L + I+A +H
Sbjct: 200 LIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWH 259
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHT 259
S A+T GEVY WG G GRLG D D +++ + P++V L + ++ H+
Sbjct: 260 STALTDKGEVYGWGRGEHGRLGLGDND----KSSKMVPQKVNL-LAEEDIIQVSCGGTHS 314
Query: 260 VLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHT 310
V T G +F++G G+LGY T P L +KI + HT
Sbjct: 315 VALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLE---LPIKIPPPEGSFNHT 362
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 336 (123.3 bits), Expect = 6.5e-21, Sum P(4) = 6.5e-21
Identities = 99/330 (30%), Positives = 160/330 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 3877 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQT-LFAVTADGKLYATGYG 3935
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + ++V + KH L++EG EV++WG
Sbjct: 3936 AGGRLGV------GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG-EVYSWGE 3988
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ +++ VAA H+A V+ +G+++TWG R G+LG+
Sbjct: 3989 AEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4048
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
S+S P++VE+L+G +V VA T+ L DG+ + R
Sbjct: 4049 --SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4106
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 4107 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4166
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G+ V++I+ G + G+VY W
Sbjct: 4167 QGLQGKKVIAIATGSLHCVCCSEDGEVYTW 4196
Score = 331 (121.6 bits), Expect = 2.8e-20, Sum P(4) = 2.8e-20
Identities = 105/351 (29%), Positives = 165/351 (47%)
Query: 139 SGPVLQVVGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISA 195
SG +++ +G S AT +VF WG QLG K+P ++L + ++
Sbjct: 2861 SGSLIRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAG 2920
Query: 196 AKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA- 254
AVT G+VY G GRLG I SG + PR++T+ L S VK +A
Sbjct: 2921 GSKSLFAVTVEGKVYACGEATNGRLG---LGISSGTVPI--PRQITA-LSSYVVKKVAVH 2974
Query: 255 --AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTA 311
+H T L +G +VF+WG +G+LG+ S PR + +LK K I +A + H+A
Sbjct: 2975 SGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3033
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
++ SGE++TWG G+LG+G ++ + P++V+ L G ++ VA L
Sbjct: 3034 ALTSSGELYTWGLGEYGRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3091
Query: 372 ERVIVA------RNLKKSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWA 421
E ++ + L + GS + I +L+ V I G S ALT+ G ++ W
Sbjct: 3092 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3151
Query: 422 S---------SDPDLRCQQLYS-MCGRNVVSISAGKYWTAAVTATGDVYMW 462
SD +R Q+ + G+ +V ++ G AVT G VY W
Sbjct: 3152 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3202
Score = 306 (112.8 bits), Expect = 8.4e-22, Sum P(3) = 8.4e-22
Identities = 82/254 (32%), Positives = 133/254 (52%)
Query: 189 VIKLISAAK-FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
++K+ + + H +A+ + GEVY+WG G GGRLGH D + + VI+ + +
Sbjct: 406 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLEEPKVISA--FSGKQAGK 462
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVA-- 304
V IA ++ T GE++TWG G+LG+ S + + P V+ LK LK+I VA
Sbjct: 463 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 522
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+ + T V+E+G+V++WG G+LG G S+ TP+++E L+ D+V V +
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDVVKVRCGSQFS 580
Query: 365 IVLGADGERVIVAR-NLKKSGSTPLKFHRKIKL-------HVVSIAAGMVHSTALTEDGA 416
+ L DG+ + + ++ G + R KL V+ +AAG H ALTED
Sbjct: 581 VALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 640
Query: 417 LFYWASSDPDLRCQ 430
+ W S+D +CQ
Sbjct: 641 VHSWGSND---QCQ 651
Score = 304 (112.1 bits), Expect = 1.5e-17, Sum P(4) = 1.5e-17
Identities = 71/220 (32%), Positives = 113/220 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV+SWG + +LG GN P ++SL G + ++A HS VT+ G++YTWG G
Sbjct: 3982 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4041
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV +A T+ T+ V++WG
Sbjct: 4042 RYGRLGHSDSEDQ------LKPKLVEA-LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4094
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 4095 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4154
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+ + PR V+ L+GK ++ +A H + DGE
Sbjct: 4155 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4192
Score = 292 (107.8 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 80/245 (32%), Positives = 123/245 (50%)
Query: 129 CKSRTPVDLLSGP-VLQVVGSGYNSV----ATEVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ V G +S A ++++WG G +LG ++ Q P V+
Sbjct: 4002 CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 4061
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G V+ + + ++ +T V++WG G G+LG G P ++
Sbjct: 4062 ALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR------GGSDGCKVPMKID 4115
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S G VK + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 4116 SLTGLGVVK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4174
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA 360
IA+A + H SE GEV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 4175 IAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKVNRVACG 4232
Query: 361 KYHTI 365
HT+
Sbjct: 4233 SAHTL 4237
Score = 286 (105.7 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 76/236 (32%), Positives = 122/236 (51%)
Query: 147 GSGYNSVAT--EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHG-----FVIKLISAAKFH 199
G Y ++A EV+SWG G +LG G+ + P + + G V+ I+ +
Sbjct: 415 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTY 473
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH-- 257
S A+T+ GE+YTWG G GRLGH S A+ P V +GL +V +A
Sbjct: 474 SAAITAEGELYTWGRGNYGRLGHGS----SEDEAI--PMLV-AGLKGLKVIDVACGSGDA 526
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
T+ TE G+V++WG G+LG D TP+ + L+ L ++ V ++ + +++
Sbjct: 527 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 586
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+V++WG +LG+GT Y P+++E L+GK ++ VAA H + L D E
Sbjct: 587 GQVYSWGKGDNQRLGHGTEEHV-RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSE 640
Score = 271 (100.5 bits), Expect = 5.4e-14, Sum P(4) = 5.4e-14
Identities = 81/301 (26%), Positives = 148/301 (49%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V++ G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 2915 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2974
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H+ A+T G+V++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 2975 SGGRHATALTVDGKVFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 3027
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE++TWG G+LG+ TQ P+ V L ++I VA ++ T
Sbjct: 3028 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3087
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 3088 ALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 3145
Query: 372 ERVIVARN----LKKSGSTPLKFHRKIK-LH---VVSIAAGMVHSTALTEDGALFYWASS 423
+ L ++ + ++ L +V +A G +H A+T+ G ++ W +
Sbjct: 3146 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3205
Query: 424 D 424
D
Sbjct: 3206 D 3206
Score = 271 (100.5 bits), Expect = 3.4e-13, Sum P(5) = 3.4e-13
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V +VFSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 2984 TVDGKVFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3039
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+YTWG G GRLGH D + P+ V LG R ++ ++ LA T+ G
Sbjct: 3040 ELYTWGLGEYGRLGHGD------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3093
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 3094 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3153
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+G+ P+VVE L+GK +V VA H + + G+ N + G
Sbjct: 3154 DYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3211
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 3212 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3246
Score = 269 (99.8 bits), Expect = 6.9e-14, Sum P(4) = 6.9e-14
Identities = 70/162 (43%), Positives = 92/162 (56%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL G V+K+ ++F SVA+T G VYTWG G
Sbjct: 4089 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWGKG 4147
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
RLGH D H V PR+V GL ++V IA H V +E GEV+TWG N
Sbjct: 4148 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4200
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
EGQLG + + PR V++L+ K+ VA + HT S S
Sbjct: 4201 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4242
Score = 229 (85.7 bits), Expect = 9.8e-14, Sum P(4) = 9.8e-14
Identities = 69/232 (29%), Positives = 112/232 (48%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEG 265
G +Y WG+ G+LG I + V TP + L R V+ I + T+ A T
Sbjct: 3875 GTIYGWGHNHRGQLG----GIEGAKVKVPTPCEALAAL--RPVQLIGGEQ--TLFAVTAD 3926
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTW 322
G+++ G G+LG ++ TP + S++ +K +AV + KH +S GEV++W
Sbjct: 3927 GKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 3986
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LK 381
G +G+LG+G + PRV+ESL+G ++V VAA H+ + A G+ +
Sbjct: 3987 GEAEDGKLGHGNRSPCDR--PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4044
Query: 382 KSGSTPLKFHRKIKL------H-VVSIAAGM--VHSTALTEDGALFYWASSD 424
+ G + + K KL H VV +A G + LT+D ++ W D
Sbjct: 4045 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4096
Score = 222 (83.2 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 65/219 (29%), Positives = 109/219 (49%)
Query: 147 GSGYNSVAT---EVFSWGSGANY-QLGTGNAHLQKLPCKVDSLHGF-VIKLI-SAAKFHS 200
GS Y++ T E+++WG G NY +LG G++ + +P V L G VI + + +
Sbjct: 470 GSTYSAAITAEGELYTWGRG-NYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQT 528
Query: 201 VAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV 260
+AVT G+V++WG G G+LG G TP+ + L V + +V
Sbjct: 529 LAVTENGQVWSWGDGDYGKLGR------GGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSV 581
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEV 319
T+ G+V++WG +LG+ + + P+ + L+ K+I VAA + H ++E EV
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 641
Query: 320 FTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
+WG N + Q + T + P + L K +VG+A
Sbjct: 642 HSWGSNDQCQ-HFDTLR-VTKPEPSALPGLDTKHIVGIA 678
Score = 215 (80.7 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 66/254 (25%), Positives = 113/254 (44%)
Query: 235 ITPRRVTSGLGSRRVKTIAAAK-HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV 293
+ P+ V VK A + HH + GEV++WG G+LG+ P+ +
Sbjct: 393 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 452
Query: 294 SSLKLK-----IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 348
S+ K ++ +A + ++A ++ GE++TWG G+LG+G+S + P +V
Sbjct: 453 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA--IPMLVAG 510
Query: 349 LKGKDLVGVAAAK--YHTIVL---G-----ADGERVIVARNLKKSGSTPLKFHRKIKLHV 398
LKG ++ VA T+ + G DG+ + R TP + L V
Sbjct: 511 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 570
Query: 399 VSIAAGMVHSTALTEDGALFYWASSDPD---------LRCQQLYS-MCGRNVVSISAGKY 448
V + G S ALT+DG ++ W D +R +L + G+ V+ ++AG
Sbjct: 571 VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGST 630
Query: 449 WTAAVTATGDVYMW 462
A+T +V+ W
Sbjct: 631 HCLALTEDSEVHSW 644
Score = 193 (73.0 bits), Expect = 6.0e-10, Sum P(3) = 6.0e-10
Identities = 54/165 (32%), Positives = 81/165 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGY 214
+V+SWG G +LG G + K P ++ L V+K+ ++F SVA+T G+VY+WG
Sbjct: 536 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF-SVALTKDGQVYSWGK 594
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G RLGH G + ++ GL ++V +AA H + TE EV +WGSN
Sbjct: 595 GDNQRLGH-------GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 647
Query: 275 REGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGE 318
+ Q T T+P P + L K I+ +A + S E
Sbjct: 648 DQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWSSCSE 692
Score = 146 (56.5 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 57/210 (27%), Positives = 96/210 (45%)
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
A VI P + GL + V IA A+ ++ + G V+T Y S DT P+
Sbjct: 348 ANVIGPIQC-EGLANLGVTQIACAEKRFLILSRNGRVYTQA--------YNS-DTL-APQ 396
Query: 292 RVSSLKLK-IIAVAAANK--HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 348
V L + I+ +AA + H ++ +GEV++WGC G+LG+G + P+V+ +
Sbjct: 397 LVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEE--PKVISA 454
Query: 349 LKGKD----LVGVAAAKYHTIVLGADGERVIVAR-NLKKSG-------STPLKFHRKIKL 396
GK +V +A ++ + A+GE R N + G + P+ L
Sbjct: 455 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 514
Query: 397 HVVSIAAGM--VHSTALTEDGALFYWASSD 424
V+ +A G + A+TE+G ++ W D
Sbjct: 515 KVIDVACGSGDAQTLAVTENGQVWSWGDGD 544
Score = 139 (54.0 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 47/173 (27%), Positives = 75/173 (43%)
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESG 317
T+ A G ++ WG N GQLG P +L L+ + + + V+ G
Sbjct: 3868 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 3927
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVI 375
+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 3928 KLYATGYGAGGRLGVGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3985
Query: 376 VAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ VV +AAG HS +T G L+ W
Sbjct: 3986 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4038
Score = 105 (42.0 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 44/159 (27%), Positives = 70/159 (44%)
Query: 127 EDCKSRTPVDLLSG-PVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCK 181
+ CK+ ++ L V++V GS ++ T +V+SWG G N +LG G + P
Sbjct: 554 DGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL 613
Query: 182 VDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
++ L G + ++A H +A+T EV++WG + H FD V P
Sbjct: 614 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQH--FDT----LRVTKPE--P 663
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG 280
S L + T KH +A + F W S E +G
Sbjct: 664 SALPG--LDT----KHIVGIACGPAQSFAWSSCSEWSIG 696
Score = 79 (32.9 bits), Expect = 9.8e-14, Sum P(4) = 9.8e-14
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
A +V++WG + Q G G + + P V L G I ++ HSVA T++
Sbjct: 3196 AGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3248
Score = 67 (28.6 bits), Expect = 8.4e-22, Sum P(3) = 8.4e-22
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGK-------KSKD----NPPLVTRLH 478
Q + + G+ V I G ++ A+T +G V+ W GK D P +V L
Sbjct: 3118 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTW-GKGDYFRLGHGSDVHVRKPQVVEGLR 3176
Query: 479 GIKKATSVSVGETHLLIV---GSLY 500
G KK V+VG H L V G +Y
Sbjct: 3177 G-KKIVHVAVGALHCLAVTDAGQVY 3200
Score = 43 (20.2 bits), Expect = 8.4e-22, Sum P(3) = 8.4e-22
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 980 SGTPPSLSRPSLRNIQMQQGKQ 1001
+G PS+ +LR I + QGK+
Sbjct: 4299 TGLGPSVGFDTLRGILISQGKE 4320
Score = 39 (18.8 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 1016 SIAPSQGSPSDSPGMNRWFKPEAETPSSIRSI-QMEEKAMKDLK 1058
++ PS +PS +R F P + P + I + K +D++
Sbjct: 3401 AVTPSAVTPSACSASSRPFIPVTDDPGAASIIAETMTKTKEDVE 3444
Score = 39 (18.8 bits), Expect = 6.5e-21, Sum P(4) = 6.5e-21
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 112 AVASVLLQSGASITLEDCKSR 132
A A +LQSG S+ L + R
Sbjct: 795 AAAQAVLQSGWSVLLPTAEER 815
Score = 39 (18.8 bits), Expect = 6.5e-21, Sum P(4) = 6.5e-21
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 152 SVATEVFSWGSGANYQLGTGNA 173
SV T + WGS + +G A
Sbjct: 2571 SVTTPKYKWGSVTHQSVGVVKA 2592
Score = 39 (18.8 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 942 SEGKVLLSSFMTS-KPIPVVSARAQQATDGDKSTPPWAASGT 982
S+ +LL S+ K + V S+ Q + D S P W +SG+
Sbjct: 2694 SQPGMLLDSWARMVKSLNVSSSVNQASRLIDGSEPCWQSSGS 2735
Score = 38 (18.4 bits), Expect = 8.2e-21, Sum P(4) = 8.2e-21
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNI 57
+L L + G+LA ++AL L+ + N+
Sbjct: 1717 NLSLLLNSGTLALTQTALRLIGPSCDNV 1744
Score = 38 (18.4 bits), Expect = 2.8e-20, Sum P(4) = 2.8e-20
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 449 WTAAVTATGDVYMW 462
WT + +G +Y W
Sbjct: 3867 WTLSAGGSGTIYGW 3880
Score = 38 (18.4 bits), Expect = 6.2e-17, Sum P(3) = 6.2e-17
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 4653 PRTIADFRGRDFVIQVLDKYN 4673
Score = 37 (18.1 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ ++ + + G +HCL+ S
Sbjct: 3956 SIQHVFIKKVAVNSGGKHCLALS 3978
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 336 (123.3 bits), Expect = 7.0e-21, Sum P(4) = 7.0e-21
Identities = 99/330 (30%), Positives = 160/330 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 3967 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQT-LFAVTADGKLYATGYG 4025
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + ++V + KH L++EG EV++WG
Sbjct: 4026 AGGRLGV------GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG-EVYSWGE 4078
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ +++ VAA H+A V+ +G+++TWG R G+LG+
Sbjct: 4079 AEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4138
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
S+S P++VE+L+G +V VA T+ L DG+ + R
Sbjct: 4139 --SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4196
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 4197 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4256
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G+ V++I+ G + G+VY W
Sbjct: 4257 QGLQGKKVIAIATGSLHCVCCSEDGEVYTW 4286
Score = 331 (121.6 bits), Expect = 3.0e-20, Sum P(4) = 3.0e-20
Identities = 105/351 (29%), Positives = 165/351 (47%)
Query: 139 SGPVLQVVGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISA 195
SG +++ +G S AT +VF WG QLG K+P ++L + ++
Sbjct: 2951 SGSLIRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAG 3010
Query: 196 AKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA- 254
AVT G+VY G GRLG I SG + PR++T+ L S VK +A
Sbjct: 3011 GSKSLFAVTVEGKVYACGEATNGRLG---LGISSGTVPI--PRQITA-LSSYVVKKVAVH 3064
Query: 255 --AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTA 311
+H T L +G +VF+WG +G+LG+ S PR + +LK K I +A + H+A
Sbjct: 3065 SGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3123
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
++ SGE++TWG G+LG+G ++ + P++V+ L G ++ VA L
Sbjct: 3124 ALTSSGELYTWGLGEYGRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3181
Query: 372 ERVIVA------RNLKKSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWA 421
E ++ + L + GS + I +L+ V I G S ALT+ G ++ W
Sbjct: 3182 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3241
Query: 422 S---------SDPDLRCQQLYS-MCGRNVVSISAGKYWTAAVTATGDVYMW 462
SD +R Q+ + G+ +V ++ G AVT G VY W
Sbjct: 3242 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3292
Score = 306 (112.8 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 82/254 (32%), Positives = 133/254 (52%)
Query: 189 VIKLISAAK-FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
++K+ + + H +A+ + GEVY+WG G GGRLGH D + + VI+ + +
Sbjct: 496 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD-TVPLEEPKVISA--FSGKQAGK 552
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVA-- 304
V IA ++ T GE++TWG G+LG+ S + + P V+ LK LK+I VA
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+ + T V+E+G+V++WG G+LG G S+ TP+++E L+ D+V V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDVVKVRCGSQFS 670
Query: 365 IVLGADGERVIVAR-NLKKSGSTPLKFHRKIKL-------HVVSIAAGMVHSTALTEDGA 416
+ L DG+ + + ++ G + R KL V+ +AAG H ALTED
Sbjct: 671 VALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 417 LFYWASSDPDLRCQ 430
+ W S+D +CQ
Sbjct: 731 VHSWGSND---QCQ 741
Score = 304 (112.1 bits), Expect = 1.7e-17, Sum P(4) = 1.7e-17
Identities = 71/220 (32%), Positives = 113/220 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV+SWG + +LG GN P ++SL G + ++A HS VT+ G++YTWG G
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4131
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV +A T+ T+ V++WG
Sbjct: 4132 RYGRLGHSDSEDQ------LKPKLVEA-LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4184
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 4185 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4244
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+ + PR V+ L+GK ++ +A H + DGE
Sbjct: 4245 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4282
Score = 292 (107.8 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 80/245 (32%), Positives = 123/245 (50%)
Query: 129 CKSRTPVDLLSGP-VLQVVGSGYNSV----ATEVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ V G +S A ++++WG G +LG ++ Q P V+
Sbjct: 4092 CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 4151
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G V+ + + ++ +T V++WG G G+LG G P ++
Sbjct: 4152 ALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR------GGSDGCKVPMKID 4205
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S G VK + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 4206 SLTGLGVVK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4264
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA 360
IA+A + H SE GEV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 4265 IAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKVNRVACG 4322
Query: 361 KYHTI 365
HT+
Sbjct: 4323 SAHTL 4327
Score = 286 (105.7 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 76/236 (32%), Positives = 122/236 (51%)
Query: 147 GSGYNSVAT--EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHG-----FVIKLISAAKFH 199
G Y ++A EV+SWG G +LG G+ + P + + G V+ I+ +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTY 563
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH-- 257
S A+T+ GE+YTWG G GRLGH S A+ P V +GL +V +A
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGS----SEDEAI--PMLV-AGLKGLKVIDVACGSGDA 616
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
T+ TE G+V++WG G+LG D TP+ + L+ L ++ V ++ + +++
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 676
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+V++WG +LG+GT Y P+++E L+GK ++ VAA H + L D E
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHV-RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Score = 271 (100.5 bits), Expect = 5.8e-14, Sum P(4) = 5.8e-14
Identities = 81/301 (26%), Positives = 148/301 (49%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V++ G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 3005 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3064
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H+ A+T G+V++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 3065 SGGRHATALTVDGKVFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 3117
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE++TWG G+LG+ TQ P+ V L ++I VA ++ T
Sbjct: 3118 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3177
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 3178 ALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 3235
Query: 372 ERVIVARN----LKKSGSTPLKFHRKIK-LH---VVSIAAGMVHSTALTEDGALFYWASS 423
+ L ++ + ++ L +V +A G +H A+T+ G ++ W +
Sbjct: 3236 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3295
Query: 424 D 424
D
Sbjct: 3296 D 3296
Score = 271 (100.5 bits), Expect = 3.8e-13, Sum P(5) = 3.8e-13
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V +VFSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 3074 TVDGKVFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3129
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+YTWG G GRLGH D + P+ V LG R ++ ++ LA T+ G
Sbjct: 3130 ELYTWGLGEYGRLGHGD------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3183
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 3184 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3243
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+G+ P+VVE L+GK +V VA H + + G+ N + G
Sbjct: 3244 DYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3301
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 3302 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3336
Score = 269 (99.8 bits), Expect = 7.5e-14, Sum P(4) = 7.5e-14
Identities = 70/162 (43%), Positives = 92/162 (56%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL G V+K+ ++F SVA+T G VYTWG G
Sbjct: 4179 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWGKG 4237
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
RLGH D H V PR+V GL ++V IA H V +E GEV+TWG N
Sbjct: 4238 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4290
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
EGQLG + + PR V++L+ K+ VA + HT S S
Sbjct: 4291 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4332
Score = 229 (85.7 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 69/232 (29%), Positives = 112/232 (48%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEG 265
G +Y WG+ G+LG I + V TP + L R V+ I + T+ A T
Sbjct: 3965 GTIYGWGHNHRGQLG----GIEGAKVKVPTPCEALAAL--RPVQLIGGEQ--TLFAVTAD 4016
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTW 322
G+++ G G+LG ++ TP + S++ +K +AV + KH +S GEV++W
Sbjct: 4017 GKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4076
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LK 381
G +G+LG+G + PRV+ESL+G ++V VAA H+ + A G+ +
Sbjct: 4077 GEAEDGKLGHGNRSPCDR--PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4134
Query: 382 KSGSTPLKFHRKIKL------H-VVSIAAGM--VHSTALTEDGALFYWASSD 424
+ G + + K KL H VV +A G + LT+D ++ W D
Sbjct: 4135 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4186
Score = 222 (83.2 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 65/219 (29%), Positives = 109/219 (49%)
Query: 147 GSGYNSVAT---EVFSWGSGANY-QLGTGNAHLQKLPCKVDSLHGF-VIKLI-SAAKFHS 200
GS Y++ T E+++WG G NY +LG G++ + +P V L G VI + + +
Sbjct: 560 GSTYSAAITAEGELYTWGRG-NYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQT 618
Query: 201 VAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV 260
+AVT G+V++WG G G+LG G TP+ + L V + +V
Sbjct: 619 LAVTENGQVWSWGDGDYGKLGR------GGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSV 671
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEV 319
T+ G+V++WG +LG+ + + P+ + L+ K+I VAA + H ++E EV
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731
Query: 320 FTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
+WG N + Q + T + P + L K +VG+A
Sbjct: 732 HSWGSNDQCQ-HFDTLR-VTKPEPSALPGLDTKHIVGIA 768
Score = 215 (80.7 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 66/254 (25%), Positives = 113/254 (44%)
Query: 235 ITPRRVTSGLGSRRVKTIAAAK-HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV 293
+ P+ V VK A + HH + GEV++WG G+LG+ P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 294 SSLKLK-----IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 348
S+ K ++ +A + ++A ++ GE++TWG G+LG+G+S + P +V
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA--IPMLVAG 600
Query: 349 LKGKDLVGVAAAK--YHTIVL---G-----ADGERVIVARNLKKSGSTPLKFHRKIKLHV 398
LKG ++ VA T+ + G DG+ + R TP + L V
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 399 VSIAAGMVHSTALTEDGALFYWASSDPD---------LRCQQLYS-MCGRNVVSISAGKY 448
V + G S ALT+DG ++ W D +R +L + G+ V+ ++AG
Sbjct: 661 VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGST 720
Query: 449 WTAAVTATGDVYMW 462
A+T +V+ W
Sbjct: 721 HCLALTEDSEVHSW 734
Score = 193 (73.0 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 54/165 (32%), Positives = 81/165 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGY 214
+V+SWG G +LG G + K P ++ L V+K+ ++F SVA+T G+VY+WG
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF-SVALTKDGQVYSWGK 684
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G RLGH G + ++ GL ++V +AA H + TE EV +WGSN
Sbjct: 685 GDNQRLGH-------GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 275 REGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGE 318
+ Q T T+P P + L K I+ +A + S E
Sbjct: 738 DQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWSSCSE 782
Score = 146 (56.5 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 57/210 (27%), Positives = 96/210 (45%)
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
A VI P + GL + V IA A+ ++ + G V+T Y S DT P+
Sbjct: 438 ANVIGPIQC-EGLANLGVTQIACAEKRFLILSRNGRVYTQA--------YNS-DTL-APQ 486
Query: 292 RVSSLKLK-IIAVAAANK--HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES 348
V L + I+ +AA + H ++ +GEV++WGC G+LG+G + P+V+ +
Sbjct: 487 LVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEE--PKVISA 544
Query: 349 LKGKD----LVGVAAAKYHTIVLGADGERVIVAR-NLKKSG-------STPLKFHRKIKL 396
GK +V +A ++ + A+GE R N + G + P+ L
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 397 HVVSIAAGM--VHSTALTEDGALFYWASSD 424
V+ +A G + A+TE+G ++ W D
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Score = 139 (54.0 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 47/173 (27%), Positives = 75/173 (43%)
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESG 317
T+ A G ++ WG N GQLG P +L L+ + + + V+ G
Sbjct: 3958 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 4017
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVI 375
+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 4018 KLYATGYGAGGRLGVGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4075
Query: 376 VAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ VV +AAG HS +T G L+ W
Sbjct: 4076 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4128
Score = 105 (42.0 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 44/159 (27%), Positives = 70/159 (44%)
Query: 127 EDCKSRTPVDLLSG-PVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCK 181
+ CK+ ++ L V++V GS ++ T +V+SWG G N +LG G + P
Sbjct: 644 DGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL 703
Query: 182 VDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
++ L G + ++A H +A+T EV++WG + H FD V P
Sbjct: 704 LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQH--FDT----LRVTKPE--P 753
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG 280
S L + T KH +A + F W S E +G
Sbjct: 754 SALPG--LDT----KHIVGIACGPAQSFAWSSCSEWSIG 786
Score = 79 (32.9 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
A +V++WG + Q G G + + P V L G I ++ HSVA T++
Sbjct: 3286 AGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3338
Score = 67 (28.6 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGK-------KSKD----NPPLVTRLH 478
Q + + G+ V I G ++ A+T +G V+ W GK D P +V L
Sbjct: 3208 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTW-GKGDYFRLGHGSDVHVRKPQVVEGLR 3266
Query: 479 GIKKATSVSVGETHLLIV---GSLY 500
G KK V+VG H L V G +Y
Sbjct: 3267 G-KKIVHVAVGALHCLAVTDAGQVY 3290
Score = 43 (20.2 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 980 SGTPPSLSRPSLRNIQMQQGKQ 1001
+G PS+ +LR I + QGK+
Sbjct: 4389 TGLGPSVGFDTLRGILISQGKE 4410
Score = 39 (18.8 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 1016 SIAPSQGSPSDSPGMNRWFKPEAETPSSIRSI-QMEEKAMKDLK 1058
++ PS +PS +R F P + P + I + K +D++
Sbjct: 3491 AVTPSAVTPSACSASSRPFIPVTDDPGAASIIAETMTKTKEDVE 3534
Score = 39 (18.8 bits), Expect = 7.0e-21, Sum P(4) = 7.0e-21
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 112 AVASVLLQSGASITLEDCKSR 132
A A +LQSG S+ L + R
Sbjct: 885 AAAQAVLQSGWSVLLPTAEER 905
Score = 39 (18.8 bits), Expect = 7.0e-21, Sum P(4) = 7.0e-21
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 152 SVATEVFSWGSGANYQLGTGNA 173
SV T + WGS + +G A
Sbjct: 2661 SVTTPKYKWGSVTHQSVGVVKA 2682
Score = 39 (18.8 bits), Expect = 6.7e-19, Sum P(3) = 6.7e-19
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 942 SEGKVLLSSFMTS-KPIPVVSARAQQATDGDKSTPPWAASGT 982
S+ +LL S+ K + V S+ Q + D S P W +SG+
Sbjct: 2784 SQPGMLLDSWARMVKSLNVSSSVNQASRLIDGSEPCWQSSGS 2825
Score = 38 (18.4 bits), Expect = 8.9e-21, Sum P(4) = 8.9e-21
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNI 57
+L L + G+LA ++AL L+ + N+
Sbjct: 1807 NLSLLLNSGTLALTQTALRLIGPSCDNV 1834
Score = 38 (18.4 bits), Expect = 3.0e-20, Sum P(4) = 3.0e-20
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 449 WTAAVTATGDVYMW 462
WT + +G +Y W
Sbjct: 3957 WTLSAGGSGTIYGW 3970
Score = 38 (18.4 bits), Expect = 6.5e-17, Sum P(3) = 6.5e-17
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 4743 PRTIADFRGRDFVIQVLDKYN 4763
Score = 37 (18.1 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ ++ + + G +HCL+ S
Sbjct: 4046 SIQHVFIKKVAVNSGGKHCLALS 4068
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 278 (102.9 bits), Expect = 9.5e-22, P = 9.5e-22
Identities = 99/323 (30%), Positives = 145/323 (44%)
Query: 125 TLEDCKSRTPVDLLSG-PVLQVVGSGYNSVAT----EVFSWGSGANYQLG-TGNAHLQKL 178
T E+ + + VD L V VVG NS+A ++F+WG LG +
Sbjct: 22 TDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTEST 81
Query: 179 PCKVDSLHGFVIKLISAA--KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAA--- 233
P V SL +K++ AA +H +AV G Y WG G+ G +G+
Sbjct: 82 PSLVKSLAN--VKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRD 139
Query: 234 VITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN-REGQLGYTSVDTQPTPRR 292
++ P+R L V+ +AA H+V+ T G V+TWG G + SV P R
Sbjct: 140 IVIPKRCAQQL---TVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISV-----PVR 191
Query: 293 VSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKG 351
V L+ +++IAV A H + E G ++ WG N GQLG G + S Y P V+ L
Sbjct: 192 VQGLENVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGTGDTQPRS-Y-PIPVQGLDD 247
Query: 352 KDLVGVAAAKYHTIVLGADGE----------RVIVARNLKKSGSTPLKFHRKIKLHVVSI 401
LV +AA +H+ L +GE R+ N K S P K + ++ +
Sbjct: 248 LTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQV 307
Query: 402 AAGMVHSTALTEDGALFYWASSD 424
+ G HS ALT DG +F + D
Sbjct: 308 SCGGTHSVALTRDGRIFSFGRGD 330
Score = 277 (102.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 95/336 (28%), Positives = 153/336 (45%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
AT V +WGSG + QLG G ++L VD+L F ++ + +S+A+ G+++TWG
Sbjct: 4 ATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 214 YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
+ + G LGHP + + TP V S L + ++ A H + + G + WG
Sbjct: 64 WNQRGTLGHPP-ETKTES----TPSLVKS-LANVKIVQAAIGGWHCLAVDDQGRAYAWGG 117
Query: 274 NREGQLGYT-SVDT--QPT------PRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGC 324
N GQ G S D +P P+R + +L + VAA H+ V++ G V+TWG
Sbjct: 118 NEYGQCGEEPSKDETGRPVRRDIVIPKRCAQ-QLTVRQVAAGGTHSVVLTREGYVWTWG- 175
Query: 325 NREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN----L 380
G S P V+ L+ L+ V A +H + L DG N L
Sbjct: 176 ---QPWPPGDIKQIS--VPVRVQGLENVRLIAVGA--FHNLALKEDGTLWAWGNNEYGQL 228
Query: 381 KKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYWASS--------DPD-- 426
+ P + ++ L +V IAAG HSTALT +G ++ W D D
Sbjct: 229 GTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKS 288
Query: 427 --LRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVY 460
+ Q++ + G +++ +S G + A+T G ++
Sbjct: 289 SKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIF 324
Score = 218 (81.8 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 77/281 (27%), Positives = 120/281 (42%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
+ S V WG G G+LG D A+V+ L V+++ +++
Sbjct: 1 MASATSVIAWGSGEDGQLGLGT-DEEKELASVV------DALEPFNVRSVVGGSRNSLAI 53
Query: 263 TEGGEVFTWGSNREGQLGYT-SVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVSESGEVF 320
+ G++FTWG N+ G LG+ T+ TP V SL +KI+ A H V + G +
Sbjct: 54 CDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAY 113
Query: 321 TWGCNREGQLGYGTSNSASNYTPR---VVESLKGKDLV--GVAAAKYHTIVLGADGERVI 375
WG N GQ G S + R V+ + L VAA H++VL +G
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWT 173
Query: 376 VARNLK----KSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASS-------- 423
+ K S P++ + + IA G H+ AL EDG L+ W ++
Sbjct: 174 WGQPWPPGDIKQISVPVRVQGLENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLGTG 231
Query: 424 DPDLRCQQL--YSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
D R + + +V I+AG + + A+T G+VY W
Sbjct: 232 DTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGW 272
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 58/197 (29%), Positives = 92/197 (46%)
Query: 142 VLQVVGSGYNSVAT--EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFH 199
V QV G +SV E + W G + G+ +P +V L ++LI+ FH
Sbjct: 152 VRQVAAGGTHSVVLTREGYVWTWGQPWP--PGDIKQISVPVRVQGLEN--VRLIAVGAFH 207
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHT 259
++A+ G ++ WG G+LG D S V GL + IAA H+
Sbjct: 208 NLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPV-------QGLDDLTLVDIAAGGWHS 260
Query: 260 VLATEGGEVFTWGSNREGQLGYTSVD--TQPTPRRVSSLKLK-IIAVAAANKHTAVVSES 316
T GEV+ WG G+LG+ D ++ P++V+ L + II V+ H+ ++
Sbjct: 261 TALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRD 320
Query: 317 GEVFTWGCNREGQLGYG 333
G +F++G G+LGYG
Sbjct: 321 GRIFSFGRGDHGRLGYG 337
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 49/149 (32%), Positives = 72/149 (48%)
Query: 82 RLLAAGADPDARDGESG--WSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLLS 139
RL+A GA + E G W+ + +G L +S I ++ T VD+ +
Sbjct: 199 RLIAVGAFHNLALKEDGTLWAWGNN--EYGQLGTGDTQPRS-YPIPVQGLDDLTLVDIAA 255
Query: 140 GPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTG-NAHLQK-LPCKVDSLHGFVIKLI 193
G G++S A EV+ WG G + +LG G N K LP KV+ L G I +
Sbjct: 256 G--------GWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQV 307
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGH 222
S HSVA+T G ++++G G GRLG+
Sbjct: 308 SCGGTHSVALTRDGRIFSFGRGDHGRLGY 336
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 265 (98.3 bits), Expect = 9.8e-22, Sum P(2) = 9.8e-22
Identities = 78/274 (28%), Positives = 134/274 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+V+ WG+G + QL ++ +P S + + + + + + G V G G
Sbjct: 3255 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEG 3311
Query: 216 RGGRLGHPDFD-IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
GRLG + D +H V+T G ++ T + H++ TE GEVF+WG
Sbjct: 3312 SYGRLGQGNSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3366
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
G+LG+ + D Q PR++ +L+ +++ ++ KH+AVV+ G++FT+G G+LG G
Sbjct: 3367 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 3426
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN--LKKSG------- 384
N+++ P V +L+G + VA HT+ + ADG V + K G
Sbjct: 3427 --NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 3484
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALF 418
S+P K + + +A G S ALT+DG ++
Sbjct: 3485 SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVY 3518
Score = 256 (95.2 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 74/245 (30%), Positives = 129/245 (52%)
Query: 130 KSRTP--VDLLSGP-VLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKV 182
+ R P ++ L G V+Q+ G +++V T ++F++G+G +LG GN +KLP +V
Sbjct: 3378 RQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 3437
Query: 183 DSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG--GRLGHPDFDIHSGQAAVITPRRV 240
+L G+ I ++ H++AV++ G + W +G G G+LG + S V V
Sbjct: 3438 TALEGYQIGQVACGLNHTLAVSADGSM-VWAFGDGDYGKLGLGNSTAKSSPQKV----DV 3492
Query: 241 TSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKI 300
G+G +K +A +V T+ G V+T+G +R L P+++ L +
Sbjct: 3493 LCGIG---IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 3549
Query: 301 IA-VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAA 359
I VA +HT ++ +G+V+ WG N EGQLG G +N P +V L+GK++ ++A
Sbjct: 3550 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTVLQGKNIRQISA 3607
Query: 360 AKYHT 364
+ H+
Sbjct: 3608 GRCHS 3612
Score = 244 (91.0 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 76/256 (29%), Positives = 133/256 (51%)
Query: 127 EDCKSRTPVDLLSGPVL-QVV---GSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKL 178
+D T + L G V+ Q+V GS +S+A EVFSWG G +LG GN+ Q+
Sbjct: 3322 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRR 3381
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P ++++L G + +S HS VTS G+++T+G G GRLG + S + P
Sbjct: 3382 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNT---SNKKL---PE 3435
Query: 239 RVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL- 296
RVT+ L ++ +A +HT+ ++ +G V+ +G G+LG + + +P++V L
Sbjct: 3436 RVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLC 3494
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
+ I VA + + +++ G V+T+G +R +G + ++ P+ + L G +
Sbjct: 3495 GIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVLAGVVIED 3552
Query: 357 VAAAKYHTIVLGADGE 372
VA HT+ L + G+
Sbjct: 3553 VAVGAEHTLALASTGD 3568
Score = 157 (60.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 87/323 (26%), Positives = 141/323 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVI-KLISA--AKFHSVAVTSLGEVYTWG 213
V + G G+ +LG GN+ + + +L GFV+ +L+++ + HS+A+T GEV++WG
Sbjct: 3305 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 3364
Query: 214 YGRGGRLGHPDFDIHSG--QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
G G+LGH + D Q + V S K A L T G +
Sbjct: 3365 DGDYGKLGHGNSDRQRRPRQIEALQGEEVVQM--SCGFKHSAVVTSDGKLFTFGNGDY-- 3420
Query: 272 GSNREGQLGYTSVDTQPTP-RRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
R G LG TS P + ++ +A N AV ++ V+ +G G+L
Sbjct: 3421 --GRLG-LGNTSNKKLPERVTALEGYQIGQVA-CGLNHTLAVSADGSMVWAFGDGDYGKL 3476
Query: 331 GYGTSNSASN-YTPRVVESLKGKDLV-----GVAAAKY-HTIVLGADGERVI-VARNLKK 382
G G S + S+ V+ + K + VA K H G D R+I + +
Sbjct: 3477 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD--RLIGLPEGRAR 3534
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWAS-SDPDL--------RCQQLY 433
+ + P + + + +A G H+ AL G ++ W S S+ L R L
Sbjct: 3535 NHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 3594
Query: 434 SMC-GRNVVSISAGKYWTAAVTA 455
++ G+N+ ISAG+ +AA TA
Sbjct: 3595 TVLQGKNIRQISAGRCHSAAWTA 3617
Score = 95 (38.5 bits), Expect = 9.8e-22, Sum P(2) = 9.8e-22
Identities = 37/129 (28%), Positives = 55/129 (42%)
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD----PDLRC------QQLYS 434
S+P K + + +A G S ALT+DG ++ + P+ R QQ+
Sbjct: 3485 SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 3544
Query: 435 MCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDN-----------PPLVTRLHGIKKA 483
+ G + ++ G T A+ +TGDVY W G S+ P LVT L G K
Sbjct: 3545 LAGVVIEDVAVGAEHTLALASTGDVYAW-GSNSEGQLGLGHTNHVREPTLVTVLQG-KNI 3602
Query: 484 TSVSVGETH 492
+S G H
Sbjct: 3603 RQISAGRCH 3611
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 305 (112.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 89/280 (31%), Positives = 140/280 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
EVFSWG G +LG GN+ QK P + L G V+ +SA HS AVT GE+YTWG
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGE 537
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGS 273
G GRLGH D S + T + S +G ++ HT+ L+ +G V+++G
Sbjct: 538 GDFGRLGHGD----SNSRNIPTLVKDISNVGE-----VSCGSSHTIALSKDGRTVWSFGG 588
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG+ + P+ + +L+ + I V A ++ + ++ +G+V+ WGC LG
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC 646
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSG---ST-P 387
G+S A+ P+++E L +V ++ H + L D E N + + G ST P
Sbjct: 647 GSSE-ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGP 705
Query: 388 LKFHRKIK----LHVVSIAAGMVHS---TALTEDGALFYW 420
+ +K+ + + I+AG HS TAL D + W
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 292 (107.8 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 100/338 (29%), Positives = 155/338 (45%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S EV+ WGS +++QL G P S + I A ++ + +++ G V
Sbjct: 369 SETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVISTDGSVRA 426
Query: 212 WGYGRGGRLGHPDFDIHSG-QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
G G GRLG D + S + P R ++V + + HT+ T GEVF+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHR-----SIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 271 WGSNREGQLGYTSVDTQPTPRRVSS-LKLKIIA-VAAANKHTAVVSESGEVFTWGCNREG 328
WG G+LG+ + TQ P+ + L+ K++ V+A +H+A V+E GE++TWG G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVG-VAAAKYHTIVLGADGERVIV---ARNLKKS- 383
+LG+G SNS + P +V+ + VG V+ HTI L DG V N K
Sbjct: 542 RLGHGDSNSRN--IPTLVKDISN---VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Query: 384 GSTPLKFHRKI-----KLHVVSIAAGMVHSTALTEDGALFYWA--------SSDPD-LRC 429
G T + K+ + + + AG S ALT G ++ W SS+ LR
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKS 467
+ + + +V IS G A++ +VY W G S
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAW-GNNS 693
Score = 265 (98.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 78/274 (28%), Positives = 134/274 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+V+ WG+G + QL ++ +P S + + + + + + G V G G
Sbjct: 3993 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEG 4049
Query: 216 RGGRLGHPDFD-IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
GRLG + D +H V+T G ++ T + H++ TE GEVF+WG
Sbjct: 4050 SYGRLGQGNSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4104
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
G+LG+ + D Q PR++ +L+ +++ ++ KH+AVV+ G++FT+G G+LG G
Sbjct: 4105 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4164
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN--LKKSG------- 384
N+++ P V +L+G + VA HT+ + ADG V + K G
Sbjct: 4165 --NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4222
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALF 418
S+P K + + +A G S ALT+DG ++
Sbjct: 4223 SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVY 4256
Score = 265 (98.3 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 78/282 (27%), Positives = 138/282 (48%)
Query: 161 GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF---HSVAVTSLGEVYTWGYGRG 217
G G+ +LG G+++ Q K+ IK +S++K H++A T+ GEV++WG G
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
G+LGH + S Q P+ + L + V ++A H+ TE GE++TWG G
Sbjct: 488 GKLGHGN---SSTQKY---PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 278 QLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGE-VFTWGCNREGQLGYGTSN 336
+LG+ +++ P V + + V+ + HT +S+ G V+++G G+LG+G +N
Sbjct: 542 RLGHGDSNSRNIPTLVKDIS-NVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 337 SASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVI----VARNLKKSGSTPLK--- 389
Y P+V+E+L+G + V A ++ L + G+ S +T L+
Sbjct: 601 RV--YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKL 658
Query: 390 FHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQ 431
+V I+ G H AL+ D ++ W ++ +C Q
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG-QCGQ 699
Score = 245 (91.3 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 87/306 (28%), Positives = 149/306 (48%)
Query: 127 EDCKSRTPVDLLSGPVL-QVV---GSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKL 178
+D T + L G V+ Q+V GS +S+A EVFSWG G +LG GN+ Q+
Sbjct: 4060 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRR 4119
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P ++++L G + +S HS VTS G+++T+G G GRLG + S + P
Sbjct: 4120 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNT---SNKKL---PE 4173
Query: 239 RVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL- 296
RVT+ L ++ +A +HT+ ++ +G V+ +G G+LG + + +P++V L
Sbjct: 4174 RVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLC 4232
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
+ I VA + + +++ G V+T+G +R +G + ++ P+ + L G +
Sbjct: 4233 GIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVLAGVVIED 4290
Query: 357 VAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIK----------LHVVSIAAGMV 406
VA HT+ L + G+ + A G L ++ +V I+AG
Sbjct: 4291 VAVGAEHTLALASTGD--VYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRC 4348
Query: 407 HSTALT 412
HS A T
Sbjct: 4349 HSAAWT 4354
Score = 227 (85.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 70/250 (28%), Positives = 120/250 (48%)
Query: 138 LSGPVLQVVGSGY-NSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
L G V+ V +GY +S A E+++WG G +LG G+++ + +P V + +
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGE 565
Query: 193 ISAAKFHSVAVTSLGE-VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKT 251
+S H++A++ G V+++G G G+LGH D + V P+ V L ++
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN------RVYKPK-VIEALQGMFIRK 618
Query: 252 IAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVD-TQPTPRRVSSLKL-KIIAVAAANKH 309
+ A ++ T G+V+ WG LG S + T P+ + L +I+ ++ + H
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH 676
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYT-PRVVESLKGKDLVGVAAAKYHTIVLG 368
+S EV+ WG N GQ G G NS T P+ V L G + ++A H++
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQG--NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Query: 369 A-DGERVIVA 377
A +R +VA
Sbjct: 735 ALPRDRQVVA 744
Score = 176 (67.0 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 63/236 (26%), Positives = 107/236 (45%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
V+ EVY WG +L + Q ++ P+ S ++ TI A ++ T +
Sbjct: 368 VSETCEVYVWGSNSSHQL------VEGTQEKILQPKLAPSFSDAQ---TIEAGQYCTFVI 418
Query: 263 TEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-----SLKLKIIAVAAANKHTAVVSESG 317
+ G V G G+LG + Q T ++++ S+K K+ + ++ HT + G
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK-KVSSSKGSDGHTLAFTTEG 477
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVES-LKGKDLVGVAAAKYHTIVLGADGERVIV 376
EVF+WG G+LG+G S S Y P++++ L+GK +V V+A H+ + DGE
Sbjct: 478 EVFSWGDGDYGKLGHGNS-STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 377 ARN----LKKSGSTPLKFHRKIK--LHVVSIAAGMVHSTALTEDGALFYWASSDPD 426
L S +K +V ++ G H+ AL++DG W+ D
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV-WSFGGGD 590
Score = 158 (60.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 88/323 (27%), Positives = 141/323 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVI-KLISA--AKFHSVAVTSLGEVYTWG 213
V + G G+ +LG GN+ + + +L GFV+ +L+++ + HS+A+T GEV++WG
Sbjct: 4043 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4102
Query: 214 YGRGGRLGHPDFDIHSG--QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
G G+LGH + D Q + V S K A L T G +
Sbjct: 4103 DGDYGKLGHGNSDRQRRPRQIEALQGEEVVQM--SCGFKHSAVVTSDGKLFTFGNGDY-- 4158
Query: 272 GSNREGQLGYTSVDTQPTP-RRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
R G LG TS P + ++ +A N AV ++ V+ +G G+L
Sbjct: 4159 --GRLG-LGNTSNKKLPERVTALEGYQIGQVA-CGLNHTLAVSADGSMVWAFGDGDYGKL 4214
Query: 331 GYGTSNSASN-YTPRVVESLKGKDLV-----GVAAAKY-HTIVLGADGERVI-VARNLKK 382
G G S + S+ V+ + K + VA K H G D R+I + +
Sbjct: 4215 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD--RLIGLPEGRAR 4272
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWAS-SDPDL--------RCQQLY 433
+ + P + + + +A G H+ AL G ++ W S S+ L R L
Sbjct: 4273 NHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4332
Query: 434 SMC-GRNVVSISAGKYWTAAVTA 455
++ G+NV ISAG+ +AA TA
Sbjct: 4333 TVLQGKNVRQISAGRCHSAAWTA 4355
Score = 96 (38.9 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 37/129 (28%), Positives = 55/129 (42%)
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD----PDLRC------QQLYS 434
S+P K + + +A G S ALT+DG ++ + P+ R QQ+
Sbjct: 4223 SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4282
Query: 435 MCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDN-----------PPLVTRLHGIKKA 483
+ G + ++ G T A+ +TGDVY W G S+ P LVT L G K
Sbjct: 4283 LAGVVIEDVAVGAEHTLALASTGDVYAW-GSNSEGQLGLGHTNHVREPTLVTVLQG-KNV 4340
Query: 484 TSVSVGETH 492
+S G H
Sbjct: 4341 RQISAGRCH 4349
Score = 45 (20.9 bits), Expect = 8.6e-19, Sum P(3) = 8.6e-19
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 666 RDNHTKKSTLKNEG-DNRLDSFFEPKADANQ 695
RDN T TL + G D R SF + +A N+
Sbjct: 3395 RDNQTAPQTLADMGGDLRKCSFIKLEAHQNR 3425
Score = 44 (20.5 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 841 QKKDNADSLKNNCSPQTTSXXXXXXXXGGLSMFLSGALDDTPKEIALPPPPT---PRSEG 897
Q+ + +D + +P TTS F+S +L+DT P T P SE
Sbjct: 2614 QQAEESDQAQQAQTPVTTSPSASSTTS-----FMSSSLEDTTTATT-PVTDTETVPASES 2667
Query: 898 P 898
P
Sbjct: 2668 P 2668
Score = 40 (19.1 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 926 QPTRNKDQFEDPSFGRSEGKVLLS 949
Q R + Q + PS SEG L++
Sbjct: 1464 QKRREEGQLQQPSTSTSEGGGLMT 1487
Score = 39 (18.8 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASSDPDL 427
+V I V + A E+G W+ P+L
Sbjct: 3515 LVDIQPHWVSALAWPEEGPSTAWSGESPEL 3544
Score = 37 (18.1 bits), Expect = 8.6e-19, Sum P(3) = 8.6e-19
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 623 LEKSLDLRSSESWSYRRLPTPTATFP 648
+++ +D ++ ES ++ TP T P
Sbjct: 2608 IKQEIDQQAEESDQAQQAQTPVTTSP 2633
Score = 37 (18.1 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 730 AKLQTKSVLERSLAELGVPIELPQAIAASAAS 761
AKL+ ++S E P+EL A+AA S
Sbjct: 3342 AKLRPN--YDKSEVEKKGPLELANALAACCLS 3371
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 305 (112.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 89/280 (31%), Positives = 140/280 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
EVFSWG G +LG GN+ QK P + L G V+ +SA HS AVT GE+YTWG
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGE 537
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGS 273
G GRLGH D S + T + S +G ++ HT+ L+ +G V+++G
Sbjct: 538 GDFGRLGHGD----SNSRNIPTLVKDISNVGE-----VSCGSSHTIALSKDGRTVWSFGG 588
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG+ + P+ + +L+ + I V A ++ + ++ +G+V+ WGC LG
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC 646
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSG---ST-P 387
G+S A+ P+++E L +V ++ H + L D E N + + G ST P
Sbjct: 647 GSSE-ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGP 705
Query: 388 LKFHRKIK----LHVVSIAAGMVHS---TALTEDGALFYW 420
+ +K+ + + I+AG HS TAL D + W
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 292 (107.8 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 100/338 (29%), Positives = 155/338 (45%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S EV+ WGS +++QL G P S + I A ++ + +++ G V
Sbjct: 369 SETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVISTDGSVRA 426
Query: 212 WGYGRGGRLGHPDFDIHSG-QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
G G GRLG D + S + P R ++V + + HT+ T GEVF+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHR-----SIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 271 WGSNREGQLGYTSVDTQPTPRRVSS-LKLKIIA-VAAANKHTAVVSESGEVFTWGCNREG 328
WG G+LG+ + TQ P+ + L+ K++ V+A +H+A V+E GE++TWG G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVG-VAAAKYHTIVLGADGERVIV---ARNLKKS- 383
+LG+G SNS + P +V+ + VG V+ HTI L DG V N K
Sbjct: 542 RLGHGDSNSRN--IPTLVKDISN---VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Query: 384 GSTPLKFHRKI-----KLHVVSIAAGMVHSTALTEDGALFYWA--------SSDPD-LRC 429
G T + K+ + + + AG S ALT G ++ W SS+ LR
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKS 467
+ + + +V IS G A++ +VY W G S
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAW-GNNS 693
Score = 265 (98.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 78/274 (28%), Positives = 134/274 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+V+ WG+G + QL ++ +P S + + + + + + G V G G
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEG 4052
Query: 216 RGGRLGHPDFD-IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
GRLG + D +H V+T G ++ T + H++ TE GEVF+WG
Sbjct: 4053 SYGRLGQGNSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
G+LG+ + D Q PR++ +L+ +++ ++ KH+AVV+ G++FT+G G+LG G
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4167
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN--LKKSG------- 384
N+++ P V +L+G + VA HT+ + ADG V + K G
Sbjct: 4168 --NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4225
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALF 418
S+P K + + +A G S ALT+DG ++
Sbjct: 4226 SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVY 4259
Score = 265 (98.3 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 78/282 (27%), Positives = 138/282 (48%)
Query: 161 GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF---HSVAVTSLGEVYTWGYGRG 217
G G+ +LG G+++ Q K+ IK +S++K H++A T+ GEV++WG G
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
G+LGH + S Q P+ + L + V ++A H+ TE GE++TWG G
Sbjct: 488 GKLGHGN---SSTQKY---PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 278 QLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGE-VFTWGCNREGQLGYGTSN 336
+LG+ +++ P V + + V+ + HT +S+ G V+++G G+LG+G +N
Sbjct: 542 RLGHGDSNSRNIPTLVKDIS-NVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 337 SASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVI----VARNLKKSGSTPLK--- 389
Y P+V+E+L+G + V A ++ L + G+ S +T L+
Sbjct: 601 RV--YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKL 658
Query: 390 FHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQ 431
+V I+ G H AL+ D ++ W ++ +C Q
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG-QCGQ 699
Score = 245 (91.3 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 87/306 (28%), Positives = 149/306 (48%)
Query: 127 EDCKSRTPVDLLSGPVL-QVV---GSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKL 178
+D T + L G V+ Q+V GS +S+A EVFSWG G +LG GN+ Q+
Sbjct: 4063 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRR 4122
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P ++++L G + +S HS VTS G+++T+G G GRLG + S + P
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNT---SNKKL---PE 4176
Query: 239 RVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL- 296
RVT+ L ++ +A +HT+ ++ +G V+ +G G+LG + + +P++V L
Sbjct: 4177 RVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLC 4235
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
+ I VA + + +++ G V+T+G +R +G + ++ P+ + L G +
Sbjct: 4236 GIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVLAGVVIED 4293
Query: 357 VAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIK----------LHVVSIAAGMV 406
VA HT+ L + G+ + A G L ++ +V I+AG
Sbjct: 4294 VAVGAEHTLALASTGD--VYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRC 4351
Query: 407 HSTALT 412
HS A T
Sbjct: 4352 HSAAWT 4357
Score = 227 (85.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 70/250 (28%), Positives = 120/250 (48%)
Query: 138 LSGPVLQVVGSGY-NSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
L G V+ V +GY +S A E+++WG G +LG G+++ + +P V + +
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGE 565
Query: 193 ISAAKFHSVAVTSLGE-VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKT 251
+S H++A++ G V+++G G G+LGH D + V P+ V L ++
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN------RVYKPK-VIEALQGMFIRK 618
Query: 252 IAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVD-TQPTPRRVSSLKL-KIIAVAAANKH 309
+ A ++ T G+V+ WG LG S + T P+ + L +I+ ++ + H
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH 676
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYT-PRVVESLKGKDLVGVAAAKYHTIVLG 368
+S EV+ WG N GQ G G NS T P+ V L G + ++A H++
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQG--NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Query: 369 A-DGERVIVA 377
A +R +VA
Sbjct: 735 ALPRDRQVVA 744
Score = 176 (67.0 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 63/236 (26%), Positives = 107/236 (45%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
V+ EVY WG +L + Q ++ P+ S ++ TI A ++ T +
Sbjct: 368 VSETCEVYVWGSNSSHQL------VEGTQEKILQPKLAPSFSDAQ---TIEAGQYCTFVI 418
Query: 263 TEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-----SLKLKIIAVAAANKHTAVVSESG 317
+ G V G G+LG + Q T ++++ S+K K+ + ++ HT + G
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK-KVSSSKGSDGHTLAFTTEG 477
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVES-LKGKDLVGVAAAKYHTIVLGADGERVIV 376
EVF+WG G+LG+G S S Y P++++ L+GK +V V+A H+ + DGE
Sbjct: 478 EVFSWGDGDYGKLGHGNS-STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 377 ARN----LKKSGSTPLKFHRKIK--LHVVSIAAGMVHSTALTEDGALFYWASSDPD 426
L S +K +V ++ G H+ AL++DG W+ D
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV-WSFGGGD 590
Score = 158 (60.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 88/323 (27%), Positives = 141/323 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVI-KLISA--AKFHSVAVTSLGEVYTWG 213
V + G G+ +LG GN+ + + +L GFV+ +L+++ + HS+A+T GEV++WG
Sbjct: 4046 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4105
Query: 214 YGRGGRLGHPDFDIHSG--QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
G G+LGH + D Q + V S K A L T G +
Sbjct: 4106 DGDYGKLGHGNSDRQRRPRQIEALQGEEVVQM--SCGFKHSAVVTSDGKLFTFGNGDY-- 4161
Query: 272 GSNREGQLGYTSVDTQPTP-RRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
R G LG TS P + ++ +A N AV ++ V+ +G G+L
Sbjct: 4162 --GRLG-LGNTSNKKLPERVTALEGYQIGQVA-CGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 331 GYGTSNSASN-YTPRVVESLKGKDLV-----GVAAAKY-HTIVLGADGERVI-VARNLKK 382
G G S + S+ V+ + K + VA K H G D R+I + +
Sbjct: 4218 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD--RLIGLPEGRAR 4275
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWAS-SDPDL--------RCQQLY 433
+ + P + + + +A G H+ AL G ++ W S S+ L R L
Sbjct: 4276 NHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4335
Query: 434 SMC-GRNVVSISAGKYWTAAVTA 455
++ G+NV ISAG+ +AA TA
Sbjct: 4336 TVLQGKNVRQISAGRCHSAAWTA 4358
Score = 96 (38.9 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 37/129 (28%), Positives = 55/129 (42%)
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD----PDLRC------QQLYS 434
S+P K + + +A G S ALT+DG ++ + P+ R QQ+
Sbjct: 4226 SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4285
Query: 435 MCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDN-----------PPLVTRLHGIKKA 483
+ G + ++ G T A+ +TGDVY W G S+ P LVT L G K
Sbjct: 4286 LAGVVIEDVAVGAEHTLALASTGDVYAW-GSNSEGQLGLGHTNHVREPTLVTVLQG-KNV 4343
Query: 484 TSVSVGETH 492
+S G H
Sbjct: 4344 RQISAGRCH 4352
Score = 44 (20.5 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 841 QKKDNADSLKNNCSPQTTSXXXXXXXXGGLSMFLSGALDDTPKEIALPPPPT---PRSEG 897
Q+ + +D + +P TTS F+S +L+DT P T P SE
Sbjct: 2617 QQAEESDQAQQAQTPVTTSPSASSTTS-----FMSSSLEDTTTATT-PVTDTETVPASES 2670
Query: 898 P 898
P
Sbjct: 2671 P 2671
Score = 40 (19.1 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 730 AKLQTKSVLERSLAELGVPIELPQAIAASAAS 761
AKL+ E+S E P+EL A+AA S
Sbjct: 3345 AKLRPN--YEKSEVEKKGPLELANALAACCLS 3374
Score = 39 (18.8 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASSDPDL 427
+V I V + A E+G W+ P+L
Sbjct: 3518 LVDIQPHWVSALAWPEEGPSTAWSGESPEL 3547
Score = 38 (18.4 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 926 QPTRNKDQFEDPSFGRSEGKVLLS 949
Q R + Q PS SEG L++
Sbjct: 1464 QKRREEGQLHQPSTSASEGGGLMT 1487
Score = 37 (18.1 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 623 LEKSLDLRSSESWSYRRLPTPTATFP 648
+++ +D ++ ES ++ TP T P
Sbjct: 2611 IKQEIDQQAEESDQAQQAQTPVTTSP 2636
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 289 (106.8 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 89/281 (31%), Positives = 140/281 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
EVFSWG G +LG GN+ QK P + L G V+ +SA HS AVT GE+YTWG
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGE 537
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGS 273
G GRLGH D S + T + S +G ++ HT+ L+ +G V+++G
Sbjct: 538 GDFGRLGHGD----SNSRNIPTLVKDISNVGE-----VSCGSSHTIALSKDGRTVWSFGG 588
Query: 274 -NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
+ G+LG+ + P+ V +L+ + I V A ++ + ++ +G+V+ WGC LG
Sbjct: 589 GDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLG 646
Query: 332 YGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSG---ST- 386
G+S A+ P+++E L +V ++ H + D E N + + G ST
Sbjct: 647 CGSSE-ATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTG 705
Query: 387 PLKFHRKIK----LHVVSIAAGMVHS---TALTEDGALFYW 420
P+ +K+ + + I+AG HS TAL D + W
Sbjct: 706 PITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 746
Score = 271 (100.5 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 87/283 (30%), Positives = 137/283 (48%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S EV+ WGS +++QL G P K+ +L + I A ++ + +++ G V
Sbjct: 369 SETCEVYVWGSNSSHQLVEGTQEKILQP-KM-ALSFSDAQTIEAGQYCTFVISTDGSVRA 426
Query: 212 WGYGRGGRLGHPDFDIHSG-QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
G G GRLG D + S + P R ++V + + HT+ T GEVF+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHR-----SIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 271 WGSNREGQLGYTSVDTQPTPRRVSS-LKLKIIA-VAAANKHTAVVSESGEVFTWGCNREG 328
WG G+LG+ + TQ P+ + L+ K++ V+A +H+A V+E GE++TWG G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVG-VAAAKYHTIVLGADGERVIV---ARNLKK-- 382
+LG+G SNS + P +V+ + VG V+ HTI L DG V N+ K
Sbjct: 542 RLGHGDSNSRN--IPTLVKDISN---VGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLG 596
Query: 383 SGSTPLKFHRKIK-----LHVVSIAAGMVHSTALTEDGALFYW 420
G T + K+ + + + AG S ALT G ++ W
Sbjct: 597 HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 639
Score = 265 (98.3 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 78/274 (28%), Positives = 134/274 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+V+ WG+G + QL ++ +P S + + + + + + G V G G
Sbjct: 3999 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEG 4055
Query: 216 RGGRLGHPDFD-IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
GRLG + D +H V+T G ++ T + H++ TE GEVF+WG
Sbjct: 4056 SYGRLGQGNSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4110
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
G+LG+ + D Q PR++ +L+ +++ ++ KH+AVV+ G++FT+G G+LG G
Sbjct: 4111 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4170
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN--LKKSG------- 384
N+++ P V +L+G + VA HT+ + ADG V + K G
Sbjct: 4171 --NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4228
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALF 418
S+P K + + +A G S ALT+DG ++
Sbjct: 4229 SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVY 4262
Score = 256 (95.2 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 74/245 (30%), Positives = 129/245 (52%)
Query: 130 KSRTP--VDLLSGP-VLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKV 182
+ R P ++ L G V+Q+ G +++V T ++F++G+G +LG GN +KLP +V
Sbjct: 4122 RQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4181
Query: 183 DSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG--GRLGHPDFDIHSGQAAVITPRRV 240
+L G+ I ++ H++AV++ G + W +G G G+LG + S V V
Sbjct: 4182 TALEGYQIGQVACGLNHTLAVSADGSM-VWAFGDGDYGKLGLGNSTAKSSPQKV----DV 4236
Query: 241 TSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKI 300
G+G +K +A +V T+ G V+T+G +R L P+++ L +
Sbjct: 4237 LCGIG---IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4293
Query: 301 IA-VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAA 359
I VA +HT ++ +G+V+ WG N EGQLG G +N P +V L+GK++ ++A
Sbjct: 4294 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE--PTLVTVLQGKNIRQISA 4351
Query: 360 AKYHT 364
+ H+
Sbjct: 4352 GRCHS 4356
Score = 244 (91.0 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 76/256 (29%), Positives = 133/256 (51%)
Query: 127 EDCKSRTPVDLLSGPVL-QVV---GSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKL 178
+D T + L G V+ Q+V GS +S+A EVFSWG G +LG GN+ Q+
Sbjct: 4066 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRR 4125
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P ++++L G + +S HS VTS G+++T+G G GRLG + S + P
Sbjct: 4126 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNT---SNKKL---PE 4179
Query: 239 RVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL- 296
RVT+ L ++ +A +HT+ ++ +G V+ +G G+LG + + +P++V L
Sbjct: 4180 RVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLC 4238
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
+ I VA + + +++ G V+T+G +R +G + ++ P+ + L G +
Sbjct: 4239 GIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVLAGVVIED 4296
Query: 357 VAAAKYHTIVLGADGE 372
VA HT+ L + G+
Sbjct: 4297 VAVGAEHTLALASTGD 4312
Score = 194 (73.4 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 74/285 (25%), Positives = 126/285 (44%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
V+ EVY WG +L + Q ++ P+ L +TI A ++ T +
Sbjct: 368 VSETCEVYVWGSNSSHQL------VEGTQEKILQPKMA---LSFSDAQTIEAGQYCTFVI 418
Query: 263 TEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-----SLKLKIIAVAAANKHTAVVSESG 317
+ G V G G+LG + Q T ++++ S+K K+ + ++ HT + G
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK-KVSSSKGSDGHTLAFTTEG 477
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVES-LKGKDLVGVAAAKYHTIVLGADGERVIV 376
EVF+WG G+LG+G S S Y P++++ L+GK +V V+A H+ + DGE
Sbjct: 478 EVFSWGDGDYGKLGHGNS-STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 377 ARN----LKKSGSTPLKFHRKIK--LHVVSIAAGMVHSTALTEDGALFYWASSDPDL--- 427
L S +K +V ++ G H+ AL++DG W+ D
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV-WSFGGGDNVGK 594
Query: 428 ----RCQQLY------SMCGRNVVSISAGKYWTAAVTATGDVYMW 462
++Y ++ G + + AG + A+T+TG VY W
Sbjct: 595 LGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 639
Score = 157 (60.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 87/323 (26%), Positives = 141/323 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVI-KLISA--AKFHSVAVTSLGEVYTWG 213
V + G G+ +LG GN+ + + +L GFV+ +L+++ + HS+A+T GEV++WG
Sbjct: 4049 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4108
Query: 214 YGRGGRLGHPDFDIHSG--QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
G G+LGH + D Q + V S K A L T G +
Sbjct: 4109 DGDYGKLGHGNSDRQRRPRQIEALQGEEVVQM--SCGFKHSAVVTSDGKLFTFGNGDY-- 4164
Query: 272 GSNREGQLGYTSVDTQPTP-RRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
R G LG TS P + ++ +A N AV ++ V+ +G G+L
Sbjct: 4165 --GRLG-LGNTSNKKLPERVTALEGYQIGQVA-CGLNHTLAVSADGSMVWAFGDGDYGKL 4220
Query: 331 GYGTSNSASN-YTPRVVESLKGKDLV-----GVAAAKY-HTIVLGADGERVI-VARNLKK 382
G G S + S+ V+ + K + VA K H G D R+I + +
Sbjct: 4221 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD--RLIGLPEGRAR 4278
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWAS-SDPDL--------RCQQLY 433
+ + P + + + +A G H+ AL G ++ W S S+ L R L
Sbjct: 4279 NHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLV 4338
Query: 434 SMC-GRNVVSISAGKYWTAAVTA 455
++ G+N+ ISAG+ +AA TA
Sbjct: 4339 TVLQGKNIRQISAGRCHSAAWTA 4361
Score = 95 (38.5 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 37/129 (28%), Positives = 55/129 (42%)
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD----PDLRC------QQLYS 434
S+P K + + +A G S ALT+DG ++ + P+ R QQ+
Sbjct: 4229 SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4288
Query: 435 MCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDN-----------PPLVTRLHGIKKA 483
+ G + ++ G T A+ +TGDVY W G S+ P LVT L G K
Sbjct: 4289 LAGVVIEDVAVGAEHTLALASTGDVYAW-GSNSEGQLGLGHTNHVREPTLVTVLQG-KNI 4346
Query: 484 TSVSVGETH 492
+S G H
Sbjct: 4347 RQISAGRCH 4355
Score = 45 (20.9 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 666 RDNHTKKSTLKNEG-DNRLDSFFEPKADANQ 695
RDN T TL + G D R SF + +A N+
Sbjct: 3401 RDNQTTPQTLADMGGDLRKCSFIKLEAHQNR 3431
Score = 43 (20.2 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 835 QSGFLVQKKDNADSLKNNCSPQTTSXXXXXXXXGGLSMFLSGALDDTPKEIALPPPPT-- 892
Q G ++++ + + +N+ + Q + + F+S +L+DT P T
Sbjct: 2609 QFGGKIKQEIDQQAEENDQAQQAQTPVTTSPSASSTTSFMSSSLEDTTTATT-PVTDTET 2667
Query: 893 -PRSEGP 898
P SE P
Sbjct: 2668 VPASESP 2674
Score = 40 (19.1 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASSDPDL 427
+V I V + A E+G W+ P+L
Sbjct: 3521 LVDIQPHWVSALAWPEEGPATAWSGESPEL 3550
Score = 37 (18.1 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 926 QPTRNKDQFEDPSFGRSEGKVLLS 949
Q + + Q + PS SEG L++
Sbjct: 1465 QKRKEEGQLQQPSTSASEGGGLMT 1488
Score = 37 (18.1 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 730 AKLQTKSVLERSLAELGVPIELPQAIAASAAS 761
AKL+ ++S E P+EL A+AA S
Sbjct: 3348 AKLRPN--YDKSEVEKKGPLELANALAACCLS 3377
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 332 (121.9 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 97/332 (29%), Positives = 161/332 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQT-LFAVTADGKLYATGYG 4017
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + ++V + KH L++EG EV++WG
Sbjct: 4018 AGGRLGI------GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG-EVYSWGE 4070
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ ++++ +AA H+A ++ +G++FTWG R G+LG+
Sbjct: 4071 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGH 4130
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
G +S P++VE+L+G ++ +A T+ L DG+ + R
Sbjct: 4131 G--DSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4188
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 4189 GCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4248
Query: 433 YSMCGRNVVSISAGKYWTAAVT--ATGDVYMW 462
+ G+ V++I+ G T G+VY W
Sbjct: 4249 QGLQGKKVIAIATGSLHCVCCTEDGLGEVYTW 4280
Score = 329 (120.9 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 101/350 (28%), Positives = 164/350 (46%)
Query: 139 SGPVLQVVGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISA 195
+G +++ +G S AT +VF WG QLG K+P ++L + ++
Sbjct: 2944 TGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAG 3003
Query: 196 AKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA-- 253
AVT G+VY G GRLG I SG + PR++T+ L + VK +A
Sbjct: 3004 GSKSLFAVTVEGKVYACGEATNGRLG---LGISSGTVPI--PRQITA-LSNYVVKKVAVH 3057
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAV 312
+ H + T G++F+WG +G+LG+ S PR + +LK K I +A + H+A
Sbjct: 3058 SGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 313 VSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
++ SGE++TWG G+LG+G ++ + P++V+ L G ++ VA L E
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 373 RVIVA------RNLKKSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWAS 422
++ + L + GS + I +L+ V I G S ALT+ G ++ W
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3235
Query: 423 SD-------PDLRC---QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
D D+ Q + + G+ +V ++ G AVT TG VY W
Sbjct: 3236 GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285
Score = 303 (111.7 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 81/254 (31%), Positives = 135/254 (53%)
Query: 189 VIKLISAAK-FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
++K+ + + H +A+++ GEV++WG G GGRLGH D + + +I+ ++ +
Sbjct: 496 IVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD-TVPLEEPKLISA--LSGKQAGK 552
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVA-- 304
V IA ++ T GE++TWG G+LG+ S + Q P V+ LK LK+I V+
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+ + T V+E+G+V++WG G+LG G S+ TP+++E L+ D+V V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDIVKVRCGSQFS 670
Query: 365 IVLGADGERVIVAR-NLKKSGSTPLKFHRKIKL-------HVVSIAAGMVHSTALTEDGA 416
I L DG+ + + ++ G + R KL V+ +AAG H ALTED
Sbjct: 671 IALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Query: 417 LFYWASSDPDLRCQ 430
+ W S+D +CQ
Sbjct: 731 VHSWGSND---QCQ 741
Score = 299 (110.3 bits), Expect = 6.2e-21, Sum P(3) = 6.2e-21
Identities = 78/225 (34%), Positives = 118/225 (52%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHG-----FVIKLISAAKFHSVAVTSLGEVY 210
EVFSWG G +LG G+ + P + +L G V+ I+ +S A+T+ GE+Y
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELY 574
Query: 211 TWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEV 268
TWG G GRLGH S + I P VT GL +V ++ T+ TE G+V
Sbjct: 575 TWGRGNYGRLGHG-----SSEDQTI-PMLVT-GLKGLKVIDVSCGSGDAQTLAVTENGQV 627
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNRE 327
++WG G+LG D TP+ + L+ L I+ V ++ + +++ G+V+TWG
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDN 687
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
+LG+GT Y P+++E LKGK ++ VAA H + L D E
Sbjct: 688 QRLGHGTEEHV-RY-PKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Score = 292 (107.8 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 70/219 (31%), Positives = 112/219 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV+SWG + +LG GN P ++SL G + I+A HS +T+ G+++TWG G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV IA T+ T+ V++WG
Sbjct: 4124 RYGRLGHGDSEDQ------LKPKLVEA-LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 4176
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
G+ + PR V+ L+GK ++ +A H + DG
Sbjct: 4237 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTEDG 4273
Score = 289 (106.8 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 80/247 (32%), Positives = 124/247 (50%)
Query: 129 CKSRTPVDLLSG-PVLQVVGSGYNSV----ATEVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ + G +S A ++F+WG G +LG G++ Q P V+
Sbjct: 4084 CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVE 4143
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G+ VI + + ++ +T V++WG G G+LG G P ++
Sbjct: 4144 ALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR------GGSDGCKVPMKID 4197
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S L V + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 4198 S-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4256
Query: 301 IAVAAANKHTAVVSESG--EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
IA+A + H +E G EV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 4257 IAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKINRVA 4314
Query: 359 AAKYHTI 365
HT+
Sbjct: 4315 CGSAHTL 4321
Score = 277 (102.6 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V ++FSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 3067 TVDGKIFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3122
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+YTWG G GRLGH D + P+ V LG R ++ ++ LA T+ G
Sbjct: 3123 ELYTWGLGEYGRLGHGD------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3176
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 3177 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+GT P+VVE L+GK +V VA H + + G+ N + G
Sbjct: 3237 DYFRLGHGTDVHVRK--PQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 3295 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 273 (101.2 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 79/301 (26%), Positives = 147/301 (48%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V++ G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3057
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H++A+T G++++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 3058 SGGRHAMALTVDGKIFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 3110
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE++TWG G+LG+ TQ P+ V L ++I VA ++ T
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 3228
Query: 372 ERVIVARN--LKKSGSTPLKFHRKIKLH------VVSIAAGMVHSTALTEDGALFYWASS 423
+ + T + + + +V +A G +H A+T+ G ++ W +
Sbjct: 3229 VVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3288
Query: 424 D 424
D
Sbjct: 3289 D 3289
Score = 256 (95.2 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 71/164 (43%), Positives = 91/164 (55%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL V+K+ ++F SVA+T G VYTWG G
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQF-SVALTKSGAVYTWGKG 4229
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG--EVFTWGS 273
RLGH D H V PR+V GL ++V IA H V TE G EV+TWG
Sbjct: 4230 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGD 4282
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
N EGQLG + + PR V++L+ KI VA + HT S S
Sbjct: 4283 NDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4326
Score = 221 (82.9 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 67/232 (28%), Positives = 110/232 (47%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEG 265
G +Y WG+ G+LG I + V TP + L R V+ I + T+ A T
Sbjct: 3957 GTIYGWGHNHRGQLG----GIEGAKVKVPTPCEALATL--RPVQLIGGEQ--TLFAVTAD 4008
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTW 322
G+++ G G+LG ++ TP + S++ +K +AV + KH +S GEV++W
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4068
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LK 381
G +G+LG+G + PRV+ESL+G ++V +AA H+ + A G+ +
Sbjct: 4069 GEAEDGKLGHGNRSPCDR--PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 382 KSGSTPLKFHRKIKL-------HVVSIAAGM--VHSTALTEDGALFYWASSD 424
+ G + K KL V+ IA G + LT+D ++ W D
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Score = 195 (73.7 bits), Expect = 9.8e-09, Sum P(4) = 9.8e-09
Identities = 53/165 (32%), Positives = 81/165 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGY 214
+V+SWG G +LG G + K P ++ L ++K+ ++F S+A+T G+VYTWG
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQF-SIALTKDGQVYTWGK 684
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G RLGH G + ++ GL ++V +AA H + TE EV +WGSN
Sbjct: 685 GDNQRLGH-------GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 275 REGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGE 318
+ Q T T+P P + L K I+ +A + S E
Sbjct: 738 DQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782
Score = 154 (59.3 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 55/199 (27%), Positives = 95/199 (47%)
Query: 243 GLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-II 301
GL + V IA A+ ++ + G V+T N + LG P+ V SL + I+
Sbjct: 448 GLANLGVVQIACAEKRFLILSRNGRVYTQAYNSD-TLG---------PQLVQSLASRNIV 497
Query: 302 AVAAANK--HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKD----LV 355
+AA + H +S +GEVF+WGC G+LG+G + P+++ +L GK +V
Sbjct: 498 KIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEE--PKLISALSGKQAGKHVV 555
Query: 356 GVAAAKYHTIVLGADGERVIVAR-NLKKSG-------STPLKFH--RKIKLHVVSIAAGM 405
+A ++ + A+GE R N + G + P+ + +K+ VS +G
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGD 615
Query: 406 VHSTALTEDGALFYWASSD 424
+ A+TE+G ++ W D
Sbjct: 616 AQTLAVTENGQVWSWGDGD 634
Score = 147 (56.8 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 49/173 (28%), Positives = 76/173 (43%)
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESG 317
T+ A G ++ WG N GQLG P +L L+ + + + V+ G
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4009
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVI 375
+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4067
Query: 376 VAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ + VV IAAG HS +T G LF W
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4120
Score = 99 (39.9 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 40/160 (25%), Positives = 71/160 (44%)
Query: 127 EDCKSRTPVDLLSG-PVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCK 181
+ CK+ ++ L +++V GS ++ T +V++WG G N +LG G + P
Sbjct: 644 DGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKL 703
Query: 182 VDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPD-FDIHSGQAAVITPRRV 240
++ L G + ++A H +A+T EV++WG + H D I + A + P
Sbjct: 704 LEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRITKPEPAAL-P--- 757
Query: 241 TSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG 280
GL ++ + IA + F W S E +G
Sbjct: 758 --GLDTKHIVGIACGP---------AQSFAWSSCSEWSIG 786
Score = 77 (32.2 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V++WG + Q G G + + P V L G I ++ HSVA T++
Sbjct: 3281 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3331
Score = 66 (28.3 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGK-------KSKD----NPPLVTRLH 478
Q + + G+ V I G ++ A+T +G V+ W GK D P +V L
Sbjct: 3201 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTW-GKGDYFRLGHGTDVHVRKPQVVEGLR 3259
Query: 479 GIKKATSVSVGETHLLIV---GSLY 500
G KK V+VG H L V G +Y
Sbjct: 3260 G-KKIVHVAVGALHCLAVTDTGQVY 3283
Score = 43 (20.2 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 980 SGTPPSLSRPSLRNIQMQQGKQ 1001
+G PS+ +LR I + QGK+
Sbjct: 4383 TGQGPSVGFDTLRGILISQGKE 4404
Score = 41 (19.5 bits), Expect = 3.7e-21, Sum P(3) = 3.7e-21
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 1016 SIAPSQGSPSDSPGMNRWFKPEAETPSSIRSI-QMEEKAMKDLK 1058
++ PS +PS + +R F P + P + I + K +D++
Sbjct: 3483 AVTPSAVTPSAAAASSRPFIPVTDDPGAASIIAETMTKTKEDVE 3526
Score = 38 (18.4 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 152 SVATEVFSWGSGANYQLGTGNA 173
SV T + WGS + +G A
Sbjct: 2654 SVTTPKYKWGSVTHRSVGVVKA 2675
Score = 38 (18.4 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 449 WTAAVTATGDVYMW 462
WT + +G +Y W
Sbjct: 3949 WTLSAGGSGTIYGW 3962
Score = 38 (18.4 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 4737 PRTIADFRGRDFVIQVLDKYN 4757
Score = 37 (18.1 bits), Expect = 9.6e-21, Sum P(3) = 9.6e-21
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ ++ + + G +HCL+ S
Sbjct: 4038 SIQHVFIKKVAVNSGGKHCLALS 4060
Score = 37 (18.1 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 10/53 (18%), Positives = 25/53 (47%)
Query: 694 NQEISKQVRALRKKLQQIEMLEVKLSNGHILDEQQIAKLQTKSVLERSLAELG 746
NQ +S QV + QQ+++ +K + + + ++ ++ ++ S G
Sbjct: 2306 NQGLSGQVDLDLLRCQQLKLYILKAGRALLSHQDTLRQILSQPAVQESSLNAG 2358
Score = 37 (18.1 bits), Expect = 9.8e-09, Sum P(4) = 9.8e-09
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 349 LKGKDLVGVAAAKYHTIVLGAD 370
LK +DL VA + H LG D
Sbjct: 1446 LKHEDLGHVALSLVHPGTLGVD 1467
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 332 (121.9 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 97/332 (29%), Positives = 161/332 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQT-LFAVTADGKLYATGYG 4017
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + ++V + KH L++EG EV++WG
Sbjct: 4018 AGGRLGI------GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG-EVYSWGE 4070
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ ++++ +AA H+A ++ +G++FTWG R G+LG+
Sbjct: 4071 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGH 4130
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
G +S P++VE+L+G ++ +A T+ L DG+ + R
Sbjct: 4131 G--DSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4188
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 4189 GCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4248
Query: 433 YSMCGRNVVSISAGKYWTAAVT--ATGDVYMW 462
+ G+ V++I+ G T G+VY W
Sbjct: 4249 QGLQGKKVIAIATGSLHCVCCTEDGLGEVYTW 4280
Score = 329 (120.9 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 101/350 (28%), Positives = 164/350 (46%)
Query: 139 SGPVLQVVGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISA 195
+G +++ +G S AT +VF WG QLG K+P ++L + ++
Sbjct: 2944 TGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAG 3003
Query: 196 AKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA-- 253
AVT G+VY G GRLG I SG + PR++T+ L + VK +A
Sbjct: 3004 GSKSLFAVTVEGKVYACGEATNGRLG---LGISSGTVPI--PRQITA-LSNYVVKKVAVH 3057
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAV 312
+ H + T G++F+WG +G+LG+ S PR + +LK K I +A + H+A
Sbjct: 3058 SGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 313 VSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
++ SGE++TWG G+LG+G ++ + P++V+ L G ++ VA L E
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 373 RVIVA------RNLKKSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWAS 422
++ + L + GS + I +L+ V I G S ALT+ G ++ W
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3235
Query: 423 SD-------PDLRC---QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
D D+ Q + + G+ +V ++ G AVT TG VY W
Sbjct: 3236 GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285
Score = 303 (111.7 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 81/254 (31%), Positives = 135/254 (53%)
Query: 189 VIKLISAAK-FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
++K+ + + H +A+++ GEV++WG G GGRLGH D + + +I+ ++ +
Sbjct: 496 IVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD-TVPLEEPKLISA--LSGKQAGK 552
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVA-- 304
V IA ++ T GE++TWG G+LG+ S + Q P V+ LK LK+I V+
Sbjct: 553 HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+ + T V+E+G+V++WG G+LG G S+ TP+++E L+ D+V V +
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK--TPKLIEKLQDLDIVKVRCGSQFS 670
Query: 365 IVLGADGERVIVAR-NLKKSGSTPLKFHRKIKL-------HVVSIAAGMVHSTALTEDGA 416
I L DG+ + + ++ G + R KL V+ +AAG H ALTED
Sbjct: 671 IALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Query: 417 LFYWASSDPDLRCQ 430
+ W S+D +CQ
Sbjct: 731 VHSWGSND---QCQ 741
Score = 299 (110.3 bits), Expect = 6.2e-21, Sum P(3) = 6.2e-21
Identities = 78/225 (34%), Positives = 118/225 (52%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHG-----FVIKLISAAKFHSVAVTSLGEVY 210
EVFSWG G +LG G+ + P + +L G V+ I+ +S A+T+ GE+Y
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELY 574
Query: 211 TWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEV 268
TWG G GRLGH S + I P VT GL +V ++ T+ TE G+V
Sbjct: 575 TWGRGNYGRLGHG-----SSEDQTI-PMLVT-GLKGLKVIDVSCGSGDAQTLAVTENGQV 627
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNRE 327
++WG G+LG D TP+ + L+ L I+ V ++ + +++ G+V+TWG
Sbjct: 628 WSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDN 687
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
+LG+GT Y P+++E LKGK ++ VAA H + L D E
Sbjct: 688 QRLGHGTEEHV-RY-PKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Score = 292 (107.8 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 70/219 (31%), Positives = 112/219 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV+SWG + +LG GN P ++SL G + I+A HS +T+ G+++TWG G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV IA T+ T+ V++WG
Sbjct: 4124 RYGRLGHGDSEDQ------LKPKLVEA-LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 4176
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
G+ + PR V+ L+GK ++ +A H + DG
Sbjct: 4237 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTEDG 4273
Score = 289 (106.8 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 80/247 (32%), Positives = 124/247 (50%)
Query: 129 CKSRTPVDLLSG-PVLQVVGSGYNSV----ATEVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ + G +S A ++F+WG G +LG G++ Q P V+
Sbjct: 4084 CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVE 4143
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G+ VI + + ++ +T V++WG G G+LG G P ++
Sbjct: 4144 ALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR------GGSDGCKVPMKID 4197
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S L V + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 4198 S-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4256
Query: 301 IAVAAANKHTAVVSESG--EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
IA+A + H +E G EV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 4257 IAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKINRVA 4314
Query: 359 AAKYHTI 365
HT+
Sbjct: 4315 CGSAHTL 4321
Score = 277 (102.6 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V ++FSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 3067 TVDGKIFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3122
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+YTWG G GRLGH D + P+ V LG R ++ ++ LA T+ G
Sbjct: 3123 ELYTWGLGEYGRLGHGD------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 3176
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 3177 LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+GT P+VVE L+GK +V VA H + + G+ N + G
Sbjct: 3237 DYFRLGHGTDVHVRK--PQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 3295 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 273 (101.2 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 79/301 (26%), Positives = 147/301 (48%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V++ G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3057
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H++A+T G++++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 3058 SGGRHAMALTVDGKIFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 3110
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE++TWG G+LG+ TQ P+ V L ++I VA ++ T
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 3228
Query: 372 ERVIVARN--LKKSGSTPLKFHRKIKLH------VVSIAAGMVHSTALTEDGALFYWASS 423
+ + T + + + +V +A G +H A+T+ G ++ W +
Sbjct: 3229 VVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3288
Query: 424 D 424
D
Sbjct: 3289 D 3289
Score = 256 (95.2 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 71/164 (43%), Positives = 91/164 (55%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL V+K+ ++F SVA+T G VYTWG G
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQF-SVALTKSGAVYTWGKG 4229
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG--EVFTWGS 273
RLGH D H V PR+V GL ++V IA H V TE G EV+TWG
Sbjct: 4230 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGD 4282
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
N EGQLG + + PR V++L+ KI VA + HT S S
Sbjct: 4283 NDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4326
Score = 221 (82.9 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 67/232 (28%), Positives = 110/232 (47%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEG 265
G +Y WG+ G+LG I + V TP + L R V+ I + T+ A T
Sbjct: 3957 GTIYGWGHNHRGQLG----GIEGAKVKVPTPCEALATL--RPVQLIGGEQ--TLFAVTAD 4008
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTW 322
G+++ G G+LG ++ TP + S++ +K +AV + KH +S GEV++W
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 4068
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LK 381
G +G+LG+G + PRV+ESL+G ++V +AA H+ + A G+ +
Sbjct: 4069 GEAEDGKLGHGNRSPCDR--PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 382 KSGSTPLKFHRKIKL-------HVVSIAAGM--VHSTALTEDGALFYWASSD 424
+ G + K KL V+ IA G + LT+D ++ W D
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Score = 195 (73.7 bits), Expect = 9.8e-09, Sum P(4) = 9.8e-09
Identities = 53/165 (32%), Positives = 81/165 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGY 214
+V+SWG G +LG G + K P ++ L ++K+ ++F S+A+T G+VYTWG
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQF-SIALTKDGQVYTWGK 684
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G RLGH G + ++ GL ++V +AA H + TE EV +WGSN
Sbjct: 685 GDNQRLGH-------GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 275 REGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGE 318
+ Q T T+P P + L K I+ +A + S E
Sbjct: 738 DQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782
Score = 154 (59.3 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 55/199 (27%), Positives = 95/199 (47%)
Query: 243 GLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-II 301
GL + V IA A+ ++ + G V+T N + LG P+ V SL + I+
Sbjct: 448 GLANLGVVQIACAEKRFLILSRNGRVYTQAYNSD-TLG---------PQLVQSLASRNIV 497
Query: 302 AVAAANK--HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKD----LV 355
+AA + H +S +GEVF+WGC G+LG+G + P+++ +L GK +V
Sbjct: 498 KIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEE--PKLISALSGKQAGKHVV 555
Query: 356 GVAAAKYHTIVLGADGERVIVAR-NLKKSG-------STPLKFH--RKIKLHVVSIAAGM 405
+A ++ + A+GE R N + G + P+ + +K+ VS +G
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGD 615
Query: 406 VHSTALTEDGALFYWASSD 424
+ A+TE+G ++ W D
Sbjct: 616 AQTLAVTENGQVWSWGDGD 634
Score = 147 (56.8 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 49/173 (28%), Positives = 76/173 (43%)
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESG 317
T+ A G ++ WG N GQLG P +L L+ + + + V+ G
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4009
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVI 375
+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVS--TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4067
Query: 376 VAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ + VV IAAG HS +T G LF W
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4120
Score = 99 (39.9 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 40/160 (25%), Positives = 71/160 (44%)
Query: 127 EDCKSRTPVDLLSG-PVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCK 181
+ CK+ ++ L +++V GS ++ T +V++WG G N +LG G + P
Sbjct: 644 DGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKL 703
Query: 182 VDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPD-FDIHSGQAAVITPRRV 240
++ L G + ++A H +A+T EV++WG + H D I + A + P
Sbjct: 704 LEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRITKPEPAAL-P--- 757
Query: 241 TSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG 280
GL ++ + IA + F W S E +G
Sbjct: 758 --GLDTKHIVGIACGP---------AQSFAWSSCSEWSIG 786
Score = 77 (32.2 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V++WG + Q G G + + P V L G I ++ HSVA T++
Sbjct: 3281 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3331
Score = 66 (28.3 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGK-------KSKD----NPPLVTRLH 478
Q + + G+ V I G ++ A+T +G V+ W GK D P +V L
Sbjct: 3201 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTW-GKGDYFRLGHGTDVHVRKPQVVEGLR 3259
Query: 479 GIKKATSVSVGETHLLIV---GSLY 500
G KK V+VG H L V G +Y
Sbjct: 3260 G-KKIVHVAVGALHCLAVTDTGQVY 3283
Score = 43 (20.2 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 980 SGTPPSLSRPSLRNIQMQQGKQ 1001
+G PS+ +LR I + QGK+
Sbjct: 4383 TGQGPSVGFDTLRGILISQGKE 4404
Score = 41 (19.5 bits), Expect = 3.7e-21, Sum P(3) = 3.7e-21
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 1016 SIAPSQGSPSDSPGMNRWFKPEAETPSSIRSI-QMEEKAMKDLK 1058
++ PS +PS + +R F P + P + I + K +D++
Sbjct: 3483 AVTPSAVTPSAAAASSRPFIPVTDDPGAASIIAETMTKTKEDVE 3526
Score = 38 (18.4 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 152 SVATEVFSWGSGANYQLGTGNA 173
SV T + WGS + +G A
Sbjct: 2654 SVTTPKYKWGSVTHRSVGVVKA 2675
Score = 38 (18.4 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 449 WTAAVTATGDVYMW 462
WT + +G +Y W
Sbjct: 3949 WTLSAGGSGTIYGW 3962
Score = 38 (18.4 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 4737 PRTIADFRGRDFVIQVLDKYN 4757
Score = 37 (18.1 bits), Expect = 9.6e-21, Sum P(3) = 9.6e-21
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ ++ + + G +HCL+ S
Sbjct: 4038 SIQHVFIKKVAVNSGGKHCLALS 4060
Score = 37 (18.1 bits), Expect = 9.8e-09, Sum P(4) = 9.8e-09
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 349 LKGKDLVGVAAAKYHTIVLGAD 370
LK +DL VA + H LG D
Sbjct: 1446 LKHEDLGHVALSLVHPGTLGVD 1467
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 306 (112.8 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 90/280 (32%), Positives = 140/280 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
EVFSWG G +LG GN+ QK P + L G V+ +SA HS AVT GE+YTWG
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGE 537
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGS 273
G GRLGH D S + T + S +G ++ HT+ L+ +G V+++G
Sbjct: 538 GDFGRLGHGD----SNSRNIPTLVKDISNVGE-----VSCGSSHTIALSKDGRTVWSFGG 588
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG+ + P+ + +L+ + I V A ++ + ++ +G+V+ WGC LG
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC 646
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSG---ST-P 387
G+S A+ P+++E L +V V+ H + L D E N + + G ST P
Sbjct: 647 GSSE-ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGP 705
Query: 388 LKFHRKIK----LHVVSIAAGMVHS---TALTEDGALFYW 420
+ +K+ + + I+AG HS TAL D + W
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 291 (107.5 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 99/338 (29%), Positives = 155/338 (45%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S EV+ WGS +++QL G P S + I A ++ + +++ G V
Sbjct: 369 SETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVISTDGSVRA 426
Query: 212 WGYGRGGRLGHPDFDIHSG-QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
G G GRLG D + S + P R ++V + + HT+ T GEVF+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHR-----SIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 271 WGSNREGQLGYTSVDTQPTPRRVSS-LKLKIIA-VAAANKHTAVVSESGEVFTWGCNREG 328
WG G+LG+ + TQ P+ + L+ K++ V+A +H+A V+E GE++TWG G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVG-VAAAKYHTIVLGADGERVIV---ARNLKKS- 383
+LG+G SNS + P +V+ + VG V+ HTI L DG V N K
Sbjct: 542 RLGHGDSNSRN--IPTLVKDISN---VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Query: 384 GSTPLKFHRKI-----KLHVVSIAAGMVHSTALTEDGALFYWA--------SSDPD-LRC 429
G T + K+ + + + AG S ALT G ++ W SS+ LR
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKS 467
+ + + +V +S G A++ +VY W G S
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAW-GNNS 693
Score = 266 (98.7 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 78/274 (28%), Positives = 134/274 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+V+ WG+G + QL ++ +P S + + + + + + G V G G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEG 4054
Query: 216 RGGRLGHPDFD-IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
GRLG + D +H V+T G ++ T + H++ TE GEVF+WG
Sbjct: 4055 SYGRLGQGNSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
G+LG+ + D Q PR++ +L+ +++ ++ KH+AVV+ G++FT+G G+LG G
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN--LKKSG------- 384
N+++ P V +L+G + VA HT+ + ADG V + K G
Sbjct: 4170 --NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4227
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALF 418
S+P K + + +A G S ALT+DG ++
Sbjct: 4228 SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVY 4261
Score = 264 (98.0 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 77/282 (27%), Positives = 138/282 (48%)
Query: 161 GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF---HSVAVTSLGEVYTWGYGRG 217
G G+ +LG G+++ Q K+ IK +S++K H++A T+ GEV++WG G
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
G+LGH + S Q P+ + L + V ++A H+ TE GE++TWG G
Sbjct: 488 GKLGHGN---SSTQKY---PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 278 QLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGE-VFTWGCNREGQLGYGTSN 336
+LG+ +++ P V + + V+ + HT +S+ G V+++G G+LG+G +N
Sbjct: 542 RLGHGDSNSRNIPTLVKDIS-NVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 337 SASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVI----VARNLKKSGSTPLK--- 389
Y P+V+E+L+G + V A ++ L + G+ S +T L+
Sbjct: 601 RV--YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKL 658
Query: 390 FHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQ 431
+V ++ G H AL+ D ++ W ++ +C Q
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG-QCGQ 699
Score = 246 (91.7 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 86/306 (28%), Positives = 150/306 (49%)
Query: 127 EDCKSRTPVDLLSGPVL-QVV---GSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKL 178
+D T + L G V+ Q+V GS +S+A EVFSWG G +LG GN+ Q+
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRR 4124
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P ++++L G + +S HS VTS G+++T+G G GRLG + S + P
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNT---SNKKL---PE 4178
Query: 239 RVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL- 296
RVT+ L ++ +A +HT+ ++ +G V+ +G G+LG + + +P+++ L
Sbjct: 4179 RVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLC 4237
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
+ I VA + + +++ G V+T+G +R +G + ++ P+ + L G +
Sbjct: 4238 GIGIKKVACGTQFSVALTKDGHVYTFGQDR--LIGLPEGRARNHNRPQQIPVLAGVIIED 4295
Query: 357 VAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIK----------LHVVSIAAGMV 406
VA HT+ L ++G+ + A G L ++ +V I+AG
Sbjct: 4296 VAVGAEHTLALASNGD--VYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRC 4353
Query: 407 HSTALT 412
HS A T
Sbjct: 4354 HSAAWT 4359
Score = 228 (85.3 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 71/250 (28%), Positives = 120/250 (48%)
Query: 138 LSGPVLQVVGSGY-NSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
L G V+ V +GY +S A E+++WG G +LG G+++ + +P V + +
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGE 565
Query: 193 ISAAKFHSVAVTSLGE-VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKT 251
+S H++A++ G V+++G G G+LGH D + V P+ V L ++
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN------RVYKPK-VIEALQGMFIRK 618
Query: 252 IAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVD-TQPTPRRVSSLKL-KIIAVAAANKH 309
+ A ++ T G+V+ WG LG S + T P+ + L +I+ V+ + H
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH 676
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYT-PRVVESLKGKDLVGVAAAKYHTIVLG 368
+S EV+ WG N GQ G G NS T P+ V L G + ++A H++
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQG--NSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734
Query: 369 A-DGERVIVA 377
A +R +VA
Sbjct: 735 ALPRDRQVVA 744
Score = 176 (67.0 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 63/236 (26%), Positives = 107/236 (45%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
V+ EVY WG +L + Q ++ P+ S ++ TI A ++ T +
Sbjct: 368 VSETCEVYVWGSNSSHQL------VEGTQEKILQPKLAPSFSDAQ---TIEAGQYCTFVI 418
Query: 263 TEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-----SLKLKIIAVAAANKHTAVVSESG 317
+ G V G G+LG + Q T ++++ S+K K+ + ++ HT + G
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK-KVSSSKGSDGHTLAFTTEG 477
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVES-LKGKDLVGVAAAKYHTIVLGADGERVIV 376
EVF+WG G+LG+G S S Y P++++ L+GK +V V+A H+ + DGE
Sbjct: 478 EVFSWGDGDYGKLGHGNS-STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 377 ARN----LKKSGSTPLKFHRKIK--LHVVSIAAGMVHSTALTEDGALFYWASSDPD 426
L S +K +V ++ G H+ AL++DG W+ D
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV-WSFGGGD 590
Score = 158 (60.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 88/323 (27%), Positives = 142/323 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVI-KLISA--AKFHSVAVTSLGEVYTWG 213
V + G G+ +LG GN+ + + +L GFV+ +L+++ + HS+A+T GEV++WG
Sbjct: 4048 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4107
Query: 214 YGRGGRLGHPDFDIHSG--QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
G G+LGH + D Q + V S K A L T G +
Sbjct: 4108 DGDYGKLGHGNSDRQRRPRQIEALQGEEVVQM--SCGFKHSAVVTSDGKLFTFGNGDY-- 4163
Query: 272 GSNREGQLGYTSVDTQPTP-RRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
R G LG TS P + ++ +A N AV ++ V+ +G G+L
Sbjct: 4164 --GRLG-LGNTSNKKLPERVTALEGYQIGQVA-CGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 331 GYGTSNSASNYTP-RVVESLKGKDLV-----GVAAAKY-HTIVLGADGERVI-VARNLKK 382
G G S + S+ V+ + K + VA K H G D R+I + +
Sbjct: 4220 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD--RLIGLPEGRAR 4277
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWAS-SDPDL--------RCQQLY 433
+ + P + + + +A G H+ AL +G ++ W S S+ L R L
Sbjct: 4278 NHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Query: 434 S-MCGRNVVSISAGKYWTAAVTA 455
+ + G+NV ISAG+ +AA TA
Sbjct: 4338 TGLQGKNVRQISAGRCHSAAWTA 4360
Score = 140 (54.3 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 50/174 (28%), Positives = 73/174 (41%)
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVF 320
+ +E EV+ WGSN QL + + P+ S + A T V+S G V
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS-DAQTIEAGQYCTFVISTDGSVR 425
Query: 321 TWGCNREGQLGYGTSNSASNYTPRVVESLKG-KDLVGVAAAKYHTIVLGADGERVIVARN 379
G G+LG G SN+ S E + K + + HT+ +GE
Sbjct: 426 ACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG 485
Query: 380 ----LKKSGSTPLKFHRKIK--LH---VVSIAAGMVHSTALTEDGALFYWASSD 424
L S+ K+ + I+ L VV ++AG HS A+TEDG L+ W D
Sbjct: 486 DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Score = 93 (37.8 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 36/129 (27%), Positives = 54/129 (41%)
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD----PDLRC------QQLYS 434
S+P K + + +A G S ALT+DG ++ + P+ R QQ+
Sbjct: 4228 SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287
Query: 435 MCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDN-----------PPLVTRLHGIKKA 483
+ G + ++ G T A+ + GDVY W G S+ P LVT L G K
Sbjct: 4288 LAGVIIEDVAVGAEHTLALASNGDVYAW-GSNSEGQLGLGHTNHVREPTLVTGLQG-KNV 4345
Query: 484 TSVSVGETH 492
+S G H
Sbjct: 4346 RQISAGRCH 4354
Score = 53 (23.7 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 38/156 (24%), Positives = 54/156 (34%)
Query: 553 APSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSF 612
APS L + Q L+ + L + DS+ L IA N ++T +
Sbjct: 3277 APSAAKLLVQLCTQNLISAATGVNLTTVDDSIQRKFLPSFLRGIAEENK--LVTSPNFVV 3334
Query: 613 ASASLDILAD----LEKSLDLRSSESWSYRRLPTPTATFPXXXXXXXXX---XXXXXLRT 665
A + +LAD L + D E L A +RT
Sbjct: 3335 TQALVALLADKGAKLRPNYDKSEVEKKGPLELANALAACCLSSRLSSQHRQWAAQQLVRT 3394
Query: 666 -----RDNHTKKSTLKNEG-DNRLDSFFEPKADANQ 695
RDN T TL + G D R SF + +A N+
Sbjct: 3395 LAAHDRDNQTTLQTLADMGGDLRKCSFIKLEAHQNR 3430
Score = 43 (20.2 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 841 QKKDNADSLKNNCSPQTTSXXXXXXXXGGLSMFLSGALDDTPKEIALPPPPT---PRSEG 897
Q+ + +D + +P TTS F+S +L+DT P T P SE
Sbjct: 2619 QQAEESDPAQQAQTPVTTSPSASSTTS-----FMSSSLEDTTTATT-PVTDTETVPASES 2672
Query: 898 P 898
P
Sbjct: 2673 P 2673
Score = 40 (19.1 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 926 QPTRNKDQFEDPSFGRSEGKVLLS 949
Q R + Q + PS SEG L++
Sbjct: 1464 QKRREEGQLQQPSTSASEGGGLMT 1487
Score = 40 (19.1 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASSDPDL 427
+V I V + A E+G W+ P+L
Sbjct: 3520 LVDIQPHWVSALAWPEEGPATAWSGESPEL 3549
Score = 37 (18.1 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 730 AKLQTKSVLERSLAELGVPIELPQAIAASAAS 761
AKL+ ++S E P+EL A+AA S
Sbjct: 3347 AKLRPN--YDKSEVEKKGPLELANALAACCLS 3376
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 346 (126.9 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 99/330 (30%), Positives = 161/330 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
++ WG QLG K+P ++L ++LI + AVT+ G++Y GYG
Sbjct: 3952 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQT-LFAVTADGKLYATGYG 4010
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GGRLG G +V TP + S + R+V + KH L++EG E+++WG
Sbjct: 4011 AGGRLGI------GGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG-ELYSWGE 4063
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+G+LG+ + PR + SL+ ++++ +AA H+A ++ SGE++TWG R G+LG+
Sbjct: 4064 AEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGH 4123
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAK--YHTIVLG--------ADGERVIVARNLKK 382
G +S P++VE+L+G ++ VA T+ L DG+ + R
Sbjct: 4124 G--DSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD 4181
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQL 432
P+K L VV + G S ALT+ GA++ W S D R +Q+
Sbjct: 4182 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4241
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G+ V++I+ G T G+VY W
Sbjct: 4242 QGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4271
Score = 322 (118.4 bits), Expect = 1.2e-18, Sum P(5) = 1.2e-18
Identities = 100/341 (29%), Positives = 159/341 (46%)
Query: 148 SGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVT 204
SG S AT +VF WG QLG K+P ++L + ++ AVT
Sbjct: 2945 SGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3004
Query: 205 SLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA--AAKHHTVLA 262
+ G+VY G GRLG + SG + PR++ S L + VK +A + H +
Sbjct: 3005 AEGKVYACGEATNGRLG---LGLSSGTIPI--PRQI-SALSNYVVKKVAVHSGGRHAMAL 3058
Query: 263 TEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVVSESGEVFT 321
T G+VF+WG +G+LG+ S PR + +LK K I +A + H+A ++ SGE+++
Sbjct: 3059 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYS 3118
Query: 322 WGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA---- 377
WG G+LG+G ++ + P++V+ L G +V VA L E ++ +
Sbjct: 3119 WGLGEYGRLGHG--DNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDG 3176
Query: 378 --RNLKKSGSTPLKFHRKI-KLH---VVSIAAGMVHSTALTEDGALFYWASSD------- 424
L + GS + I +L+ V I G S ALT+ G ++ W D
Sbjct: 3177 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3236
Query: 425 PDLRC---QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
D+ Q + + G+ +V ++ G AVT TG V+ W
Sbjct: 3237 TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAW 3277
Score = 308 (113.5 bits), Expect = 3.6e-21, Sum P(4) = 3.6e-21
Identities = 86/248 (34%), Positives = 131/248 (52%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLG-SRRVKTIAAAKH 257
H +A++ GEV++WG G GGRLGH D + + +I+ V SG ++V IA
Sbjct: 496 HYLALSVNGEVFSWGCGDGGRLGHGD-TTYLEEPTMIS---VFSGRPVGKQVVHIACGST 551
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVA--AANKHTAVVS 314
++ T GE+ TWG G+LG+ S + Q TP V++LK LK+I VA + + T V+
Sbjct: 552 YSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVT 611
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
E+G+V++WG G+LG G S+ TP++VE L+ D+V V ++ L DG+
Sbjct: 612 ENGQVWSWGDGDYGKLGRGGSDGCK--TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVY 669
Query: 375 IVAR-NLKKSGSTPLKFHRKIKL-------HVVSIAAGMVHSTALTEDGALFYWASSDPD 426
+ + ++ G + R KL VV IA G H ALTE+G + W S+D
Sbjct: 670 TWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSNDKL 729
Query: 427 LRCQQLYS 434
L+S
Sbjct: 730 QHFDTLFS 737
Score = 299 (110.3 bits), Expect = 1.7e-16, Sum P(4) = 1.7e-16
Identities = 71/220 (32%), Positives = 113/220 (51%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
E++SWG + +LG GN P ++SL G + I+A HS +T+ GE+YTWG G
Sbjct: 4057 ELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKG 4116
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH--HTVLATEGGEVFTWGS 273
R GRLGH D + + P+ V + L RV +A T+ T+ V++WG
Sbjct: 4117 RYGRLGHGDSEDQ------LKPKLVEA-LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGD 4169
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG D P ++ SL L ++ V ++ + +++SG V+TWG +LG+
Sbjct: 4170 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4229
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+ + PR V+ L+GK ++ +A H + DGE
Sbjct: 4230 GSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4267
Score = 295 (108.9 bits), Expect = 3.6e-16, Sum P(4) = 3.6e-16
Identities = 80/245 (32%), Positives = 123/245 (50%)
Query: 129 CKSRTPVDLLSG-PVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKVD 183
C ++ L G V+ + G +S E+++WG G +LG G++ Q P V+
Sbjct: 4077 CDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVE 4136
Query: 184 SLHGF-VIKLI-SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT 241
+L G VI + + ++ +T V++WG G G+LG G P ++
Sbjct: 4137 ALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGR------GGSDGCKVPMKID 4190
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKI 300
S G VK + +V T+ G V+TWG +LG+ S D PR+V L+ K+
Sbjct: 4191 SLTGLGVVK-VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4249
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA 360
IA+A + H +E GEV+TWG N EGQLG GT+N+ PR+V +L+GK + VA
Sbjct: 4250 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--PRLVAALQGKKINRVACG 4307
Query: 361 KYHTI 365
HT+
Sbjct: 4308 SAHTL 4312
Score = 294 (108.6 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 74/227 (32%), Positives = 117/227 (51%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL----ISAAKFHSVAVTSLG 207
SV EVFSWG G +LG G+ + P + G + I+ +S A+T+ G
Sbjct: 501 SVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADG 560
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E++TWG G GRLGH + + TP VT+ G + + + LA TE G
Sbjct: 561 ELHTWGRGNYGRLGHGSSEDQT------TPMLVTALKGLKVIDVACGSGDAQTLAVTENG 614
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCN 325
+V++WG G+LG D TP+ V L+ L I+ V ++ + +++ G+V+TWG
Sbjct: 615 QVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 674
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
+LG+GT Y P++++SL+GK +V +A H + L +GE
Sbjct: 675 DNQRLGHGTDEHV-RY-PKLLDSLQGKRVVDIAVGSTHCLALTEEGE 719
Score = 276 (102.2 bits), Expect = 8.7e-15, Sum P(4) = 8.7e-15
Identities = 80/301 (26%), Positives = 147/301 (48%)
Query: 142 VLQVVGSGYN--SVATE--VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLIS-- 194
V+QV G + +V E V++ G N +LG G ++ +P ++ +L +V+K ++
Sbjct: 2990 VVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVH 3049
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
+ H++A+T G+V++WG G G+LGH F + PR + + L ++R++ IA
Sbjct: 3050 SGGRHAMALTVDGKVFSWGEGDDGKLGH--FS----RMNCDKPRLIEA-LKTKRIRDIAC 3102
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK--HTA 311
H+ T GE+++WG G+LG+ TQ P+ V L +++ VA ++ T
Sbjct: 3103 GSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTL 3162
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+++ G VF+WG G+LG G S + P+ +E L G+ + + ++ L G
Sbjct: 3163 ALTDEGMVFSWGDGDFGKLGRGGSEGCN--IPQNIERLNGQGVCQIECGAQFSLALTKSG 3220
Query: 372 ERVIVARN--LKKSGSTPLKFHRKIKLH------VVSIAAGMVHSTALTEDGALFYWASS 423
+ + T + + + +V +A G +H A+TE G +F W +
Sbjct: 3221 VVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDN 3280
Query: 424 D 424
D
Sbjct: 3281 D 3281
Score = 274 (101.5 bits), Expect = 4.5e-13, Sum P(5) = 4.5e-13
Identities = 72/162 (44%), Positives = 92/162 (56%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYG 215
V+SWG G +LG G + K+P K+DSL G V+K+ ++F SVA+T G VYTWG G
Sbjct: 4164 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWGKG 4222
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
RLGH D H V PR+V GL ++V IA H V TE GEV+TWG N
Sbjct: 4223 DYHRLGHGSDD-H-----VRRPRQV-QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4275
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES 316
EGQLG + + PR V++L+ KI VA + HT S S
Sbjct: 4276 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4317
Score = 273 (101.2 bits), Expect = 1.5e-13, Sum P(5) = 1.5e-13
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCK----VDSLHGFVIKLISAAKFHSVAVTSLG 207
+V +VFSWG G + +LG H ++ C +++L I+ I+ HS A+TS G
Sbjct: 3059 TVDGKVFSWGEGDDGKLG----HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3114
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA-TEGG 266
E+Y+WG G GRLGH D + P+ V LG R V+ ++ LA T+ G
Sbjct: 3115 ELYSWGLGEYGRLGHGD------NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEG 3168
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
VF+WG G+LG + P+ + L + + + + + +++SG V+TWG
Sbjct: 3169 MVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3228
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG 384
+LG+GT P++VE L+GK +V VA H + + G+ N + G
Sbjct: 3229 DYFRLGHGTDVHVRK--PQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQG 3286
Query: 385 STPLKFHRKIKL-------HVVSIAAGMVHSTALT 412
+ +RK L + +A G HS A T
Sbjct: 3287 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3321
Score = 223 (83.6 bits), Expect = 6.9e-13, Sum P(4) = 6.9e-13
Identities = 63/231 (27%), Positives = 107/231 (46%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G +Y WG+ G+LG I + V TP T L + R + + T G
Sbjct: 3950 GTIYGWGHNHRGQLG----GIEGAKVKVPTP---TEALATLRPVQLIGGEQTLFAVTADG 4002
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---LKIIAVAAANKHTAVVSESGEVFTWG 323
+++ G G+LG ++ TP + S++ ++ +AV + KH +S GE+++WG
Sbjct: 4003 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWG 4062
Query: 324 CNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKK 382
+G+LG+G + PRV+ESL+G ++V +AA H+ + A GE + +
Sbjct: 4063 EAEDGKLGHGNRSPCDR--PRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGR 4120
Query: 383 SGSTPLKFHRKIKL------H-VVSIAAGM--VHSTALTEDGALFYWASSD 424
G + K KL H V+ +A G + LT+D ++ W D
Sbjct: 4121 LGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4171
Score = 199 (75.1 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 74/214 (34%), Positives = 103/214 (48%)
Query: 127 EDCKSRTPVDLLSG-PVLQVV-GSG-YNSVA-TE---VFSWGSGANYQLGTGNAHLQKLP 179
ED + V L G V+ V GSG ++A TE V+SWG G +LG G + K P
Sbjct: 579 EDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 638
Query: 180 CKVDSLHGF-VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
V+ L ++K+ ++F SVA+T G+VYTWG G RLGH D H V P+
Sbjct: 639 KLVEKLQDLDIVKVCCGSQF-SVALTKDGQVYTWGKGDNQRLGHGT-DEH-----VRYPK 691
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL 298
+ S L +RV IA H + TE GEV +WGSN + Q T + P+ + L
Sbjct: 692 LLDS-LQGKRVVDIAVGSTHCLALTEEGEVHSWGSNDKLQHFDTLFSNKKQPKALPGLN- 749
Query: 299 KIIAVAAANKHTAVVS-ESGEVFTWGCNREGQLG 331
+KH +S G+ F+W E +G
Sbjct: 750 --------SKHIVGISCGPGQSFSWSSCSEWSVG 775
Score = 149 (57.5 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 49/174 (28%), Positives = 78/174 (44%)
Query: 259 TVLATEGGEVFTWGSNREGQLG-YTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSES 316
T+ A G ++ WG N GQLG + PTP + L+ + + + V+
Sbjct: 3943 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALAT-LRPVQLIGGEQTLFAVTAD 4001
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERV 374
G+++ G G+LG G + S S TP ++ES++ + V V + H + L ++GE
Sbjct: 4002 GKLYATGYGAGGRLGIGGTESVS--TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELY 4059
Query: 375 IVAR----NLKKSGSTPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYW 420
L +P R I+ + VV IAAG HS +T G L+ W
Sbjct: 4060 SWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTW 4113
Score = 140 (54.3 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 45/157 (28%), Positives = 72/157 (45%)
Query: 281 YTSVDTQPT-PRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
Y S P ++S K+ +A +H +S +GEVF+WGC G+LG+G +
Sbjct: 467 YKSTTLAPMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLE 526
Query: 340 NYTPRVVESLK--GKDLVGVAAAKYHTIVLGADGERVIVAR-NLKKSG-------STPLK 389
T V S + GK +V +A ++ + ADGE R N + G +TP+
Sbjct: 527 EPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPML 586
Query: 390 FHRKIKLHVVSIAAGM--VHSTALTEDGALFYWASSD 424
L V+ +A G + A+TE+G ++ W D
Sbjct: 587 VTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 623
Score = 81 (33.6 bits), Expect = 6.9e-13, Sum P(4) = 6.9e-13
Identities = 28/86 (32%), Positives = 41/86 (47%)
Query: 128 DCKSRTP--VDLLSGP-VLQV-VGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPC 180
D R P V+ L G ++ V VG+ + TE VF+WG + Q G G + + P
Sbjct: 3238 DVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPT 3297
Query: 181 KVDSLHGFVIKLISAAKFHSVAVTSL 206
V L G I ++ HSVA T++
Sbjct: 3298 LVQGLEGQKITRVACGSSHSVAWTTV 3323
Score = 72 (30.4 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 439 NVVSISAGKYWTAAVTATGDVYMW---DGKK---SKDN----PPLVTRLHGIKKATSVSV 488
++V + G ++ A+T G VY W D ++ D P L+ L G K+ ++V
Sbjct: 648 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQG-KRVVDIAV 706
Query: 489 GETHLL 494
G TH L
Sbjct: 707 GSTHCL 712
Score = 69 (29.3 bits), Expect = 3.6e-21, Sum P(4) = 3.6e-21
Identities = 32/104 (30%), Positives = 45/104 (43%)
Query: 404 GMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWD 463
GMV S + G L S ++ Q + + G+ V I G ++ A+T +G V+ W
Sbjct: 3168 GMVFSWGDGDFGKLGRGGSEGCNIP-QNIERLNGQGVCQIECGAQFSLALTKSGVVWTW- 3225
Query: 464 GK-------KSKD----NPPLVTRLHGIKKATSVSVGETHLLIV 496
GK D P +V L G KK V+VG H L V
Sbjct: 3226 GKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAV 3268
Score = 45 (20.9 bits), Expect = 3.6e-21, Sum P(4) = 3.6e-21
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 956 PIPVVSARAQQATDGDKSTPPWAASGTP-PSLSRPSLRNIQMQQGKQHCLSHSPKTRTAG 1014
P+ S+ +D ++ P A G PS S + K+ ++ S T
Sbjct: 3420 PLECPSSSPVPPSDCSSASSPCEAEGPALPSESEERVSPHPWMDSKRGEVTTSEDATTPS 3479
Query: 1015 FSIAPSQGSPSDSP 1028
++ PS S S P
Sbjct: 3480 SAVTPSTASASSRP 3493
Score = 41 (19.5 bits), Expect = 1.0e-19, Sum P(4) = 1.0e-19
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 29 KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVP 78
++L L + L +++ + L NGG +N+ T L S W +P
Sbjct: 841 EELGLGLGSVLLNNLKQTVVTLASNGGVLNTVQAAAQTVLQSG-WSVLLP 889
Score = 40 (19.1 bits), Expect = 1.2e-20, Sum P(4) = 1.2e-20
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 985 SLSRPSLRNIQMQQGKQHCLSHS 1007
S+ +R + + G +HCL+ S
Sbjct: 4031 SIQHVFIRKVAVNSGGKHCLALS 4053
Score = 39 (18.8 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 33 LAVREGSLADVESALALL 50
LAV+ G+L+ + SA+ LL
Sbjct: 286 LAVQRGTLSQLLSAVLLL 303
Score = 39 (18.8 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 112 AVASVLLQSGASITLEDCKSR 132
A A +LQSG S+ L + R
Sbjct: 874 AAAQTVLQSGWSVLLPTAEER 894
Score = 39 (18.8 bits), Expect = 3.6e-16, Sum P(4) = 3.6e-16
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 343 PRVVESLKGKDLVGVAAAKYH 363
PR + +G+D V KY+
Sbjct: 4728 PRTIADFRGRDFVVQVLDKYN 4748
Score = 38 (18.4 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 152 SVATEVFSWGSGANYQLGTGNA 173
SV T + WGS + +G A
Sbjct: 2646 SVTTPKYKWGSVTHRSVGVVKA 2667
Score = 38 (18.4 bits), Expect = 2.0e-17, Sum P(6) = 2.0e-17
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 449 WTAAVTATGDVYMW 462
WT + +G +Y W
Sbjct: 3942 WTLSAGGSGTIYGW 3955
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 289 (106.8 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 71/219 (32%), Positives = 111/219 (50%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGR 216
V S G + QLG A +LP + +L ++ L+S K HS+AV G V+ WG G
Sbjct: 44 VLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGS 103
Query: 217 GGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE 276
G+LG +F S TP+++ + L ++ ++ +H++ ++ +VF+WG N
Sbjct: 104 EGQLGIGEFKEIS-----FTPKKIMT-LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH 157
Query: 277 GQLGY-TSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGT 334
GQLG +Q +P+RV SL+ + + VAA H+ +S G F WG N GQL
Sbjct: 158 GQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG 217
Query: 335 SN-SASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
N + P V +LK +V ++ HT VL DG+
Sbjct: 218 RNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256
Score = 281 (104.0 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 82/244 (33%), Positives = 130/244 (53%)
Query: 134 PVDLLSGPVLQVVGSGY-NSVAT----EVFSWGSGANYQLGTGN-AHLQKLPCKVDSLHG 187
P+ L ++ +V G +S+A VF+WG+G+ QLG G + P K+ +L+
Sbjct: 68 PIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLND 127
Query: 188 FVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG-HPDFDIHSGQAAVITPRRVTSGLGS 246
I +S +HS+A++ +V++WG G+LG +F QA+ P+RV S L
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP---SQAS---PQRVRS-LEG 180
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYT--SVDTQPT-PRRVSSLK-LKIIA 302
+ +AA H+ + G F WGSN GQL + +V Q P V +LK L ++
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVY 240
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG-VAAAK 361
++ + HTAV+++ G+VFT+G NR GQLGY S + P++VE + G LV +
Sbjct: 241 ISCGDAHTAVLTQDGKVFTFGDNRSGQLGY--SPTPEKRGPQLVERIDG--LVSQIDCGS 296
Query: 362 YHTI 365
YHT+
Sbjct: 297 YHTL 300
Score = 264 (98.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 91/307 (29%), Positives = 139/307 (45%)
Query: 191 KLISAA--KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRR 248
+L+ AA + HS+ + + V + G G+LG Q + P + + L +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR-----RGAQRGEL-PEPIQA-LETLI 76
Query: 249 VKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV-DTQPTPRRVSSLK-LKIIAVAAA 306
V ++ K H++ G VF WG+ EGQLG + TP+++ +L +KII V+
Sbjct: 77 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCG 136
Query: 307 NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
+ H+ +S+ +VF+WG N GQLG G S +P+ V SL+G L VAA H+
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 195
Query: 367 L---------GAD--GERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDG 415
L G++ G+ + RN+ + PL L VV I+ G H+ LT+DG
Sbjct: 196 LSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG 255
Query: 416 ALFYWA---------SSDPDLRCQQLYSMCGRNVVSISAGKYWTAA-VTATGDVYMWDGK 465
+F + S P+ R QL V I G Y T A V TG V +
Sbjct: 256 KVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Query: 466 KSKDNPP 472
S + P
Sbjct: 316 PSDTSKP 322
Score = 221 (82.9 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 67/234 (28%), Positives = 104/234 (44%)
Query: 238 RRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK 297
RR T+G + A+ + H++L V + G N GQLG P + +L+
Sbjct: 14 RRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALE 73
Query: 298 LKIIAVAAANK-HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
I+ + + K H+ V G VF WG EGQLG G S +TP+ + +L ++
Sbjct: 74 TLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIMTLNDIKIIQ 132
Query: 357 VAAAKYHTIVLGADGERVIVARN------LKK---SGSTPLKFHRKIKLHVVSIAAGMVH 407
V+ YH++ L D + +N L K S ++P + + + +AAG H
Sbjct: 133 VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 192
Query: 408 STALTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYM 461
S AL+ G F W S+ QL ++ GRNV S A+ G VY+
Sbjct: 193 SFALSLCGTSFGWGSNSAG----QL-ALSGRNVPVQSNKPLSVGALKNLGVVYI 241
Score = 211 (79.3 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 59/190 (31%), Positives = 95/190 (50%)
Query: 142 VLQVVGSGYNSVA----TEVFSWGSGANYQLGTGNAH-LQKLPCKVDSLHGFVIKLISAA 196
++QV Y+S+A ++VFSWG ++ QLG G Q P +V SL G + ++A
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 189
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTS--GLGSRRVKTIAA 254
HS A++ G + WG G+L SG+ + + S L + V I+
Sbjct: 190 GAHSFALSLCGTSFGWGSNSAGQLAL------SGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHT-AVV 313
HT + T+ G+VFT+G NR GQLGY+ + P+ V + + + + HT A V
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYV 303
Query: 314 SESGEVFTWG 323
+G+V ++G
Sbjct: 304 HTTGQVVSFG 313
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 305 (112.4 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 92/280 (32%), Positives = 141/280 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
EVFSWG G +LG GN+ QK P + L G V+ +SA HS AVT GE+YTWG
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGE 537
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGS 273
G GRLGH D S + T + S +G ++ HT+ L+ +G V+++G
Sbjct: 538 GDFGRLGHGD----SNSRNIPTLVKDISNVGE-----VSCGSSHTIALSKDGRTVWSFGG 588
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
G+LG+ + P+ + +L+ + I V A ++ + ++ +G+V+ WGC LG
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC 646
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSG---ST-P 387
G+S A+ P+++E L +V ++ H + L D E N + + G ST P
Sbjct: 647 GSSE-ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGP 705
Query: 388 LKFHRKIK-LHVVSI---AAGMVHS---TALTEDGALFYW 420
+ +K+ L VSI +AG HS TAL D + W
Sbjct: 706 ITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 292 (107.8 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 100/338 (29%), Positives = 155/338 (45%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S EV+ WGS +++QL G P S + I A ++ + +++ G V
Sbjct: 369 SETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVISTDGSVRA 426
Query: 212 WGYGRGGRLGHPDFDIHSG-QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
G G GRLG D + S + P R ++V + + HT+ T GEVF+
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHR-----SIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 271 WGSNREGQLGYTSVDTQPTPRRVSS-LKLKIIA-VAAANKHTAVVSESGEVFTWGCNREG 328
WG G+LG+ + TQ P+ + L+ K++ V+A +H+A V+E GE++TWG G
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVG-VAAAKYHTIVLGADGERVIV---ARNLKKS- 383
+LG+G SNS + P +V+ + VG V+ HTI L DG V N K
Sbjct: 542 RLGHGDSNSRN--IPTLVKDISN---VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Query: 384 GSTPLKFHRKI-----KLHVVSIAAGMVHSTALTEDGALFYWA--------SSDPD-LRC 429
G T + K+ + + + AG S ALT G ++ W SS+ LR
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656
Query: 430 QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKS 467
+ + + +V IS G A++ +VY W G S
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAW-GNNS 693
Score = 267 (99.0 bits), Expect = 6.8e-15, Sum P(3) = 6.8e-15
Identities = 86/317 (27%), Positives = 152/317 (47%)
Query: 161 GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF---HSVAVTSLGEVYTWGYGRG 217
G G+ +LG G+++ Q K+ IK +S++K H++A T+ GEV++WG G
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
G+LGH + S Q P+ + L + V ++A H+ TE GE++TWG G
Sbjct: 488 GKLGHGN---SSTQKY---PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 278 QLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGE-VFTWGCNREGQLGYGTSN 336
+LG+ +++ P V + + V+ + HT +S+ G V+++G G+LG+G +N
Sbjct: 542 RLGHGDSNSRNIPTLVKDIS-NVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 337 SASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVI----VARNLKKSGSTPLK--- 389
Y P+V+E+L+G + V A ++ L + G+ S +T L+
Sbjct: 601 RV--YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKL 658
Query: 390 FHRKIKLHVVSIAAGMVHSTALTEDGALFYWA-----------SSDPDLRCQQLYSMCGR 438
+V I+ G H AL+ D ++ W S+ P + +++ + G
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGV 718
Query: 439 NVVSISAGKYWTAAVTA 455
++ ISAG + A TA
Sbjct: 719 SIQQISAGTSHSLAWTA 735
Score = 260 (96.6 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 77/274 (28%), Positives = 133/274 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+V+ WG+G + QL ++ +P S + + + + + + G V G G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPVAAPSFSQ--AQQVVCGQNCTFVIQANGTVLACGEG 4054
Query: 216 RGGRLGHPDFD-IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
GRLG + D +H V+T G ++ T + H++ TE GEVF+WG
Sbjct: 4055 SYGRLGQGNSDDLH-----VLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
G+LG+ + D Q PR++ +L+ +++ ++ KH+AVV+ G++FT+G G+LG G
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 4169
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN--LKKSG------- 384
N+++ P V +L+G + VA HT+ + DG V + K G
Sbjct: 4170 --NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK 4227
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALF 418
S+P K + + +A G S ALT+DG ++
Sbjct: 4228 SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVY 4261
Score = 253 (94.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 73/247 (29%), Positives = 128/247 (51%)
Query: 130 KSRTP--VDLLSGP-VLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKV 182
+ R P ++ L G V+Q+ G +++V T ++F++G+G +LG GN +KLP +V
Sbjct: 4121 RQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERV 4180
Query: 183 DSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG--GRLGHPDFDIHSGQAAVITPRRV 240
+L G+ I ++ H+VAV++ G + W +G G G+LG + S V +
Sbjct: 4181 TALEGYQIGQVACGLNHTVAVSTDGSM-VWAFGDGDYGKLGLGNSTAKSSPQKV----DI 4235
Query: 241 TSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTS--VDTQPTPRRVSSLKL 298
G+G +K +A +V T+ G V+T+G + +G P++V L
Sbjct: 4236 LCGIG---IKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSG 4292
Query: 299 KIIA-VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGV 357
I +A +HT +S +G+V+ WG N EGQLG G +N P ++ L+GK++ +
Sbjct: 4293 VFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE--PTLITVLQGKNIRQI 4350
Query: 358 AAAKYHT 364
+A + H+
Sbjct: 4351 SAGRCHS 4357
Score = 251 (93.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 76/256 (29%), Positives = 133/256 (51%)
Query: 127 EDCKSRTPVDLLSGPVL-QVV---GSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKL 178
+D T + L G V+ Q+V GS +S+A EVFSWG G +LG GN+ Q+
Sbjct: 4065 DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRR 4124
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P ++++L G + +S HS VT+ G+++T+G G GRLG + S + P
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNT---SNKKL---PE 4178
Query: 239 RVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL- 296
RVT+ L ++ +A +HTV ++T+G V+ +G G+LG + + +P++V L
Sbjct: 4179 RVTA-LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILC 4237
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
+ I VA + + +++ G V+T+G + +G + ++ P+ V L G +
Sbjct: 4238 GIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIED 4297
Query: 357 VAAAKYHTIVLGADGE 372
+A HT+ L + G+
Sbjct: 4298 IAVGAEHTLALSSTGD 4313
Score = 211 (79.3 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 69/277 (24%), Positives = 128/277 (46%)
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGE 267
+VY WG GR G+L +G+ V+ P S + + + ++ T + G
Sbjct: 3998 DVYLWGAGRHGQLAE------AGRN-VMVPVAAPS---FSQAQQVVCGQNCTFVIQANGT 4047
Query: 268 VFTWGSNREGQLGYTSVDTQPTPRRVSSLK----LKIIAVAAANKHTAVVSESGEVFTWG 323
V G G+LG + D +S+L+ +++ ++ H+ ++ESGEVF+WG
Sbjct: 4048 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4107
Query: 324 CNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN---- 379
G+LG+G NS PR +E+L+G+++V ++ H+ V+ ADG+
Sbjct: 4108 DGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4165
Query: 380 LKKSGSTPLKFHRKIKL----HVVSIAAGMVHSTALTEDGALFYWASSDPDL-------- 427
L ++ K ++ + +A G+ H+ A++ DG++ WA D D
Sbjct: 4166 LGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMV-WAFGDGDYGKLGLGNS 4224
Query: 428 ----RCQQLYSMCGRNVVSISAGKYWTAAVTATGDVY 460
Q++ +CG + ++ G ++ A+T G VY
Sbjct: 4225 TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVY 4261
Score = 176 (67.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 63/236 (26%), Positives = 107/236 (45%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
V+ EVY WG +L + Q ++ P+ S ++ TI A ++ T +
Sbjct: 368 VSETCEVYVWGSNSSHQL------VEGTQEKILQPKLAPSFSDAQ---TIEAGQYCTFVI 418
Query: 263 TEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-----SLKLKIIAVAAANKHTAVVSESG 317
+ G V G G+LG + Q T ++++ S+K K+ + ++ HT + G
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK-KVSSSKGSDGHTLAFTTEG 477
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVES-LKGKDLVGVAAAKYHTIVLGADGERVIV 376
EVF+WG G+LG+G S S Y P++++ L+GK +V V+A H+ + DGE
Sbjct: 478 EVFSWGDGDYGKLGHGNS-STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 377 ARN----LKKSGSTPLKFHRKIK--LHVVSIAAGMVHSTALTEDGALFYWASSDPD 426
L S +K +V ++ G H+ AL++DG W+ D
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV-WSFGGGD 590
Score = 95 (38.5 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 39/131 (29%), Positives = 58/131 (44%)
Query: 385 STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWAS-SD-----PDLRC------QQL 432
S+P K + + +A G S ALT+DG ++ + SD P+ R QQ+
Sbjct: 4228 SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQV 4287
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDN-----------PPLVTRLHGIK 481
+ G + I+ G T A+++TGDVY W G S+ P L+T L G K
Sbjct: 4288 PVLSGVFIEDIAVGAEHTLALSSTGDVYAW-GSNSEGQLGLGHTNHVREPTLITVLQG-K 4345
Query: 482 KATSVSVGETH 492
+S G H
Sbjct: 4346 NIRQISAGRCH 4356
Score = 44 (20.5 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 667 DNHTKKSTLKNEGDNRLDSF-FEPKADANQEISKQVRALRKK 707
D++ ST ++ +N + SF EP A E Q RKK
Sbjct: 2447 DDNKAHSTASSKSENEIASFSLEPSA-LGMESQHQPAEGRKK 2487
Score = 42 (19.8 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 19/77 (24%), Positives = 29/77 (37%)
Query: 554 PSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFA 613
PS L + Q L+ + L + D + L IA N ++T +
Sbjct: 3278 PSAAKLLVQLCTQNLISAATGVNLTTVDDPIQRKFLPSFLRGIAEENK--LVTSPNFVVT 3335
Query: 614 SASLDILADLEKSLDLR 630
A + +LAD K LR
Sbjct: 3336 QALVALLAD--KGAKLR 3350
Score = 39 (18.8 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 17/64 (26%), Positives = 24/64 (37%)
Query: 965 QQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQQGKQHCLSHSPKTRTAGFSIAPSQGSP 1024
QQ +GD+S T PS S S + + + +P T T P+ SP
Sbjct: 2619 QQVEEGDQSQQAQTPVTTSPSAS--STTSFMSSSLEDTTTATTPVTDT---ETVPASESP 2673
Query: 1025 SDSP 1028
P
Sbjct: 2674 GVMP 2677
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 282 (104.3 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 104/365 (28%), Positives = 162/365 (44%)
Query: 160 WGSGANYQLGTGNAHLQKL-PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGG 218
WGS QLG G + P G +K ++ HS+ + G VYT G G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64
Query: 219 RLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQ 278
+LGH G P V L ++++ ++ + H++ E G+VF WG+ GQ
Sbjct: 65 QLGHDK----GGSR----PELV-GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQ 115
Query: 279 LGY-TSVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSN 336
LG T+ + PR + L + +I V N H +S+ G++F WG N GQLG G
Sbjct: 116 LGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLG-KG 174
Query: 337 SASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNL--------KKSGSTP- 387
S +P+ ++SL G L ++A H+ L G +N ++ + P
Sbjct: 175 EPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPC 234
Query: 388 -LKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDP------DLRCQQL----YSMC 436
+KF R K VV I+ G H+ ALT++G LF + + R + L +
Sbjct: 235 HIKFLRSQK--VVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELM 292
Query: 437 GRNVVSISAGKYWTAA-VTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLI 495
G V I+ G+ T A V +TG +Y + G ++ L T + G K+ V V L
Sbjct: 293 GTEVSQIACGRNHTLAFVPSTGLIYAF-GCNTQGQ--LGTGIRGSAKSP-VPVSNIQPLC 348
Query: 496 VGSLY 500
+G+ Y
Sbjct: 349 IGNAY 353
Score = 268 (99.4 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 71/209 (33%), Positives = 107/209 (51%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKL-PCKVDSLHGFVIKLISAA 196
+ QV+ ++ +A ++F WG ++ QLG G L P + SL G + ISA
Sbjct: 139 ISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAG 198
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
HS A++ G V+ WG G+LG D AV P + L S++V I+ +
Sbjct: 199 GDHSFALSFSGAVFGWGKNSAGQLGLND----EQDRAV--PCHIKF-LRSQKVVYISCGE 251
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHT-AVVS 314
HT T+ G +FT+G+ +GQLG+ S +P PRRV L ++ +A HT A V
Sbjct: 252 EHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVP 311
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTP 343
+G ++ +GCN +GQLG G SA + P
Sbjct: 312 STGLIYAFGCNTQGQLGTGIRGSAKSPVP 340
Score = 263 (97.6 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 81/274 (29%), Positives = 127/274 (46%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGR 216
V++ GS + QLG + P V +L I +S + HS+AV G+V+ WG G
Sbjct: 55 VYTCGSNSCGQLGHDKGGSR--PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGD 112
Query: 217 GGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE 276
GG+LG + + + AV PR + L R+ + HH + ++ G++F WG N
Sbjct: 113 GGQLG-----LGTAEEAVRVPRLIKK-LCEHRISQVMCGNHHCIALSKDGQLFVWGENSS 166
Query: 277 GQLGYTSVDTQP-TPRRVSSL-KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGT 334
GQLG + +P+ + SL + + ++A H+ +S SG VF WG N GQLG
Sbjct: 167 GQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLND 226
Query: 335 SNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSG--ST---PL 388
+ P ++ L+ + +V ++ + HT L +G K + G ST PL
Sbjct: 227 EQDRA--VPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL 284
Query: 389 KFHRKIKL---HVVSIAAGMVHSTALTEDGALFY 419
R ++L V IA G H+ A L Y
Sbjct: 285 P-RRVMELMGTEVSQIACGRNHTLAFVPSTGLIY 317
Score = 261 (96.9 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 60/212 (28%), Positives = 108/212 (50%)
Query: 156 EVFSWGSGANYQLGTGNAH-LQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
+VF+WG+G QLG G A ++P + L I + H +A++ G+++ WG
Sbjct: 104 QVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGE 163
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G+LG + G+ + ++P+ + S G + I+A H+ + G VF WG N
Sbjct: 164 NSSGQLG-----LGKGEPSTLSPQPLKSLCGIPLTQ-ISAGGDHSFALSFSGAVFGWGKN 217
Query: 275 REGQLGYTSVDTQPTPRRVSSLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
GQLG + P + L+ K++ ++ +HTA +++ G +FT+G +GQLG+
Sbjct: 218 SAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHD 277
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTI 365
++ + PR V L G ++ +A + HT+
Sbjct: 278 STRNEP--LPRRVMELMGTEVSQIACGRNHTL 307
Score = 185 (70.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 58/195 (29%), Positives = 92/195 (47%)
Query: 131 SRTPVDLLSG-PVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLPCKVDSL 185
S P+ L G P+ Q+ G +S A VF WG + QLG + + +PC + L
Sbjct: 180 SPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFL 239
Query: 186 HGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLG 245
+ IS + H+ A+T G ++T+G G G+LGH D + PRRV +G
Sbjct: 240 RSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGH---DSTRNEPL---PRRVMELMG 293
Query: 246 SRRVKTIAAAKHHTV-LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVA 304
+ V IA ++HT+ G ++ +G N +GQLG + +P VS+++ I A
Sbjct: 294 TE-VSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNA 352
Query: 305 -AANKHTAVVS-ESG 317
+H + SG
Sbjct: 353 YTRTEHCTIAKIHSG 367
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 281 (104.0 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 92/326 (28%), Positives = 156/326 (47%)
Query: 160 WGSGANYQLGTGNAHLQKL--PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG 217
WG+ + QLG G + + P + D ++ + H+V V G VYT G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
G+LGH + + P +V + L ++ + +A + HT+ + G+V+ WG + +G
Sbjct: 64 GQLGH--------EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 278 QLGYT-SVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTS 335
QLG S + PR + SL ++I+ VA H+ +S++ EVF WG N+ GQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI- 173
Query: 336 NSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN------LKKSGS--TP 387
+ +P++++SL G + VAA H+ VL G RN L P
Sbjct: 174 DCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233
Query: 388 --LKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQLYSM 435
LK R K +V I G H+ ALT++G +F + S+ ++ ++++ +
Sbjct: 234 NLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291
Query: 436 CGRNVVSISAGKYWTAA-VTATGDVY 460
G V ++ G+ T+A V ++G +Y
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIY 317
Score = 269 (99.8 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 68/211 (32%), Positives = 109/211 (51%)
Query: 156 EVFSWGSGANYQLGT-GNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
+V++WG ++ QLG G+ ++P + SL I ++ +HS+A++ EV+ WG
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
+ G+LG D Q + P+ + S LG ++ A H VL T G +F WG N
Sbjct: 164 NKYGQLGL-GIDCQK-QTS---PQLIKSLLGIPFMQVAAGGAHSFVL-TLSGAIFGWGRN 217
Query: 275 REGQLGYTSVDTQPTPRRVSSLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
+ GQLG + + P + SL+ KI+ + HTA +++ G VFT+G GQLG+
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+++ N PR V L G + VA + HT
Sbjct: 278 STSHEIN--PRKVFELMGSIVTQVACGRQHT 306
Score = 260 (96.6 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 78/227 (34%), Positives = 112/227 (49%)
Query: 127 EDCKSRTPVDLLSGPVLQVV--GSGYN-----SVATEVFSWGSGANYQLGTG-NAHLQKL 178
E+C R P ++ S +Q+V GY S A+EVF WG QLG G + Q
Sbjct: 122 EEC-IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS 180
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P + SL G ++A HS +T G ++ WG + G+LG D + P
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR------YVPN 234
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL 298
+ S L S+++ I + HT T+ G VFT+G+ GQLG+ S + PR+V L
Sbjct: 235 LLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMG 293
Query: 299 KIIA-VAAANKHT-AVVSESGEVFTWGCNREGQLGYG-TSNSASNYT 342
I+ VA +HT A V SG ++++G GQLG G TSN S +T
Sbjct: 294 SIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 188 (71.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 62/221 (28%), Positives = 99/221 (44%)
Query: 271 WGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTAVVSESGEVFTWGCNRE 327
WG+ GQLG +D + PRR + K+ V +HT V + G V+T GCN
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTP 387
GQLG+ S P V +L +++V VA + HT+ L G+ + A L G
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQ--VYAWGLDSDGQLG 117
Query: 388 L-------KFHRKIK----LHVVSIAAGMVHSTALTEDGALFYWASSDPD-----LRCQQ 431
L + R IK + +V +A G HS AL++ +F W + + CQ+
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK 177
Query: 432 ------LYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK 466
+ S+ G + ++AG + +T +G ++ W K
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 281 (104.0 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 93/326 (28%), Positives = 155/326 (47%)
Query: 160 WGSGANYQLGTGNAHLQKL--PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG 217
WG+ + QLG G + + P K D ++ + H+V V G VYT G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
G+LGH + + P +V + L ++ + ++ + HT+ + G+V+ WG + +G
Sbjct: 64 GQLGH--------EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 278 QLGYT-SVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTS 335
QLG S + PR + SL ++I+ VA H+ +S++ EVF WG N+ GQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIE 174
Query: 336 NSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN------LKKSGS--TP 387
+P++++SL G + VAA H+ VL G RN L P
Sbjct: 175 CQKQT-SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233
Query: 388 --LKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQLYSM 435
LK R K +V I G H+ ALT++G +F + S+ ++ ++++ +
Sbjct: 234 NLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291
Query: 436 CGRNVVSISAGKYWTAA-VTATGDVY 460
G V I+ G+ T+A V ++G +Y
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIY 317
Score = 269 (99.8 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 66/211 (31%), Positives = 109/211 (51%)
Query: 156 EVFSWGSGANYQLGT-GNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
+V++WG ++ QLG G+ ++P + SL I ++ +HS+A++ EV+ WG
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
+ G+LG I + +P+ + S LG ++ A H VL T G +F WG N
Sbjct: 164 NKYGQLG---LGIECQKQT--SPQLIKSLLGIPFMQVAAGGAHSFVL-TLSGAIFGWGRN 217
Query: 275 REGQLGYTSVDTQPTPRRVSSLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
+ GQLG + + P + SL+ KI+ + HTA +++ G VFT+G GQLG+
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+++ N PR V L G + +A + HT
Sbjct: 278 STSHEIN--PRKVFELMGSIVTQIACGRQHT 306
Score = 258 (95.9 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 77/227 (33%), Positives = 111/227 (48%)
Query: 127 EDCKSRTPVDLLSGPVLQVV--GSGYN-----SVATEVFSWGSGANYQLGTG-NAHLQKL 178
E+C R P ++ S +Q+V GY S A+EVF WG QLG G Q
Sbjct: 122 EEC-IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P + SL G ++A HS +T G ++ WG + G+LG D + P
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR------YVPN 234
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL 298
+ S L S+++ I + HT T+ G VFT+G+ GQLG+ S + PR+V L
Sbjct: 235 LLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMG 293
Query: 299 KIIA-VAAANKHT-AVVSESGEVFTWGCNREGQLGYG-TSNSASNYT 342
I+ +A +HT A V SG ++++G GQLG G TSN S +T
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 184 (69.8 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/221 (27%), Positives = 99/221 (44%)
Query: 271 WGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTAVVSESGEVFTWGCNRE 327
WG+ GQLG +D + PR+ + K+ V +HT V + G V+T GCN
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTP 387
GQLG+ S P V +L +++V V+ + HT+ L G+ + A L G
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQ--VYAWGLDSDGQLG 117
Query: 388 L-------KFHRKIK----LHVVSIAAGMVHSTALTEDGALFYWASSDPD-----LRCQQ 431
L + R IK + +V +A G HS AL++ +F W + + CQ+
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQK 177
Query: 432 ------LYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK 466
+ S+ G + ++AG + +T +G ++ W K
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 221 (82.9 bits), Expect = 2.6e-20, Sum P(5) = 2.6e-20
Identities = 69/211 (32%), Positives = 104/211 (49%)
Query: 175 LQKLPCKVDSLHGFVIKLISAAKFHSVAVTS--LGEVYTWGYGRGGRLGHPDFDIHSGQA 232
L++LP + + ++ + +KFHS +T+ + +Y G GRGGRLG D Q
Sbjct: 308 LEELPAMILT-RPIIVHNVVLSKFHSAVITTDPVSNLYICGVGRGGRLGLSD-----DQR 361
Query: 233 AVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYT-----SVDTQ 287
T V L R+V + + HT+ T+ GE++TWGSN QLGY D +
Sbjct: 362 VRFTYVPVQGALADRKVTQVVLGQDHTMAVTDKGELWTWGSNAYSQLGYALPPPAKKDEE 421
Query: 288 P---TPRRV-SSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS---N 340
P P++V +LK +++ +A+ +V + VF WG N GQL ++S S
Sbjct: 422 PMSLAPKQVFGALKKEVVIGVSASAIHSVAHTTNSVFCWGKN-SGQLALMDADSRSLEVQ 480
Query: 341 YTPR-VVESLKGKDLVGVAAAKYHTIVLGAD 370
TPR V SL +V V+A T VL A+
Sbjct: 481 QTPRKVAASLFSAPIVMVSAIDKATTVLLAN 511
Score = 123 (48.4 bits), Expect = 2.6e-20, Sum P(5) = 2.6e-20
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 57 INSRNIFGLTPL---HSAIWRNQVPIVRRLLAAGA-DPDARDGESGWSSLHRALHFGHLA 112
+NSR+ GLT L S+ N + VR LL A D A+D ESGW++LHRAL++G+++
Sbjct: 89 VNSRDYMGLTLLLRAASSASENALAFVRALLDHPAIDIYAQDPESGWNALHRALYYGNIS 148
Query: 113 VASVLL 118
VA +LL
Sbjct: 149 VARMLL 154
Score = 103 (41.3 bits), Expect = 3.3e-08, Sum P(5) = 3.3e-08
Identities = 62/215 (28%), Positives = 96/215 (44%)
Query: 142 VLQVV-GSGYNSVAT---EVFSWGSGANYQLGTG--------NAHLQKLPCKV-DSLHGF 188
V QVV G + T E+++WGS A QLG + P +V +L
Sbjct: 378 VTQVVLGQDHTMAVTDKGELWTWGSNAYSQLGYALPPPAKKDEEPMSLAPKQVFGALKKE 437
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRR 248
V+ +SA+ HSVA T+ V+ WG G+L D D S + TPR+V + L S
Sbjct: 438 VVIGVSASAIHSVAHTT-NSVFCWGKN-SGQLALMDADSRSLEVQQ-TPRKVAASLFSAP 494
Query: 249 VKTIAAA-KHHTVL-ATEGGEVFT-WGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAA 305
+ ++A K TVL A VFT +G N + + +D T +S+ + + AA
Sbjct: 495 IVMVSAIDKATTVLLANHIVCVFTNYGYN---MVKFPEIDPFAT-YHISNPAVVLGYDAA 550
Query: 306 ANKHTAV--VSESGEVFTWGCNREGQLGYGTSNSA 338
A+K + ++ GE R G +++A
Sbjct: 551 ASKGQRICHITSGGETIAAVTGRGDLFVMGLNHNA 585
Score = 93 (37.8 bits), Expect = 2.9e-07, Sum P(5) = 2.9e-07
Identities = 49/169 (28%), Positives = 76/169 (44%)
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
+SA+ HSVA T+ V+ WG G+L D D S + TPR+V + L S + +
Sbjct: 442 VSASAIHSVAHTT-NSVFCWGKN-SGQLALMDADSRSLEVQQ-TPRKVAASLFSAPIVMV 498
Query: 253 AAA-KHHTVL-ATEGGEVFT-WGSNREGQLGYTSVDTQPT-----PRRV------SSLKL 298
+A K TVL A VFT +G N + + +D T P V +S
Sbjct: 499 SAIDKATTVLLANHIVCVFTNYGYN---MVKFPEIDPFATYHISNPAVVLGYDAAASKGQ 555
Query: 299 KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE 347
+I + + + A V+ G++F G N + S+SAS P ++
Sbjct: 556 RICHITSGGETIAAVTGRGDLFVMGLNHNADV----SSSASTTNPAKIK 600
Score = 51 (23.0 bits), Expect = 2.6e-20, Sum P(5) = 2.6e-20
Identities = 42/207 (20%), Positives = 69/207 (33%)
Query: 815 SKKKEEDAMSEGNVAIEYSKQSGFLVQKKDNAD---SLKNNCSPQTTSXXXXXXXXGGLS 871
SK D MSE ++ + +G QK+ A+ + N PQ S +
Sbjct: 1281 SKLDLRDIMSEDSMNTTSALSAGLAAQKQKEANVKAATANVSQPQKMSQKERKKHQQQMQ 1340
Query: 872 MFLSGALDDTPKEIALPPPPTPRSEGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNK 931
L + P + P + G W SL+++ + + K P
Sbjct: 1341 AALLAQEANQPNKTPWEAVPGQKDRGSPWKPTPATT-KVSLKDVTAAE---KHTPPA--- 1393
Query: 932 DQFEDPSFGRSEGKVLLSSFMTSKPIPVVSARAQQATDGDKSTPPWAASGTPPSLSRPSL 991
S S K +++ + KP +A G TP +P S P +
Sbjct: 1394 ------SAAASMAKPFVAAESSPKPAQRRTASPDTRFAGQSRTPKGLEGRSPQPSSSPLV 1447
Query: 992 RNIQMQQGKQHCLSHSPKTRTAGFSIA 1018
+ + KQH + T G S+A
Sbjct: 1448 PHSKSYM-KQH--KNQKAEPTLGLSMA 1471
Score = 46 (21.3 bits), Expect = 2.6e-20, Sum P(5) = 2.6e-20
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 437 GRNVVSISAGKYWTAAVTATGDVYM 461
G+ + I++G AAVT GD+++
Sbjct: 554 GQRICHITSGGETIAAVTGRGDLFV 578
Score = 46 (21.3 bits), Expect = 3.3e-08, Sum P(5) = 3.3e-08
Identities = 12/61 (19%), Positives = 33/61 (54%)
Query: 346 VESLKGKDLVGVAAAKYHTI---VLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIA 402
+E + GK + + + + T+ +L A +R+ A N+++ + + R+ ++ ++ +A
Sbjct: 823 IEDMDGKACIQLESLELSTVLNLILFAYTDRIAPAWNIRQPSPSLTQASRQQRVELMKVA 882
Query: 403 A 403
A
Sbjct: 883 A 883
Score = 44 (20.5 bits), Expect = 3.6e-20, Sum P(4) = 3.6e-20
Identities = 20/76 (26%), Positives = 32/76 (42%)
Query: 876 GALDDTPKEIALPPPPTPRS-EGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQF 934
G+LDD + P +S + + PK S + ++ V P K Q
Sbjct: 1159 GSLDDGTMTTSTPDKGKRKSTRNEPFSPSLRPKVSTADLMFAMDEDDDGVLSPG-GKQQ- 1216
Query: 935 EDPSFGRSEGKVLLSS 950
+ PSF RSE ++S+
Sbjct: 1217 QQPSFSRSEDPSIVST 1232
Score = 44 (20.5 bits), Expect = 1.7e-12, Sum P(5) = 1.7e-12
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 68 LHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRA 105
L A W+N V RRLLA P G + ++ HRA
Sbjct: 5 LWRAYWQNDVDRFRRLLA----PS---GHTNHATSHRA 35
Score = 40 (19.1 bits), Expect = 3.2e-19, Sum P(5) = 3.2e-19
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 884 EIALPPPP---TPRSE-GPAWGGAKVPKGSASLREIQSEQS 920
+I + P P +P ++ G W + LR+I SE S
Sbjct: 1253 DITISPSPINASPLTKTGSPWQQKPLVTSKLDLRDIMSEDS 1293
Score = 38 (18.4 bits), Expect = 2.6e-20, Sum P(5) = 2.6e-20
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 542 AIDKDDSGVRLAPSLK 557
A+D+DD GV L+P K
Sbjct: 1200 AMDEDDDGV-LSPGGK 1214
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 279 (103.3 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 92/326 (28%), Positives = 156/326 (47%)
Query: 160 WGSGANYQLGTGNAHLQKL--PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG 217
WG+ + QLG G + + P K D ++ + H+V V G VYT G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
G+LGH + + P +V + L ++ + ++ + HT+ + G+V+ WG + +G
Sbjct: 64 GQLGH--------EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 278 QLGYT-SVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTS 335
QLG S + PR + SL ++I+ VA H+ +S++ EVF WG N+ GQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI- 173
Query: 336 NSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN------LKKSGS--TP 387
+ +P++++SL G + +AA H+ VL G RN L P
Sbjct: 174 DCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233
Query: 388 --LKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQLYSM 435
LK R K +V I G H+ ALT++G +F + S+ ++ ++++ +
Sbjct: 234 NLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291
Query: 436 CGRNVVSISAGKYWTAA-VTATGDVY 460
G V I+ G+ T+A V ++G +Y
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIY 317
Score = 274 (101.5 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 67/211 (31%), Positives = 112/211 (53%)
Query: 156 EVFSWGSGANYQLGT-GNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
+V++WG ++ QLG G+ ++P + SL I ++ +HS+A++ EV+ WG
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
+ G+LG I + A +P+ + S LG ++ IAA H+ + T G +F WG N
Sbjct: 164 NKYGQLG---LGIDCKKQA--SPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRN 217
Query: 275 REGQLGYTSVDTQPTPRRVSSLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
+ GQLG + + P + SL+ KI+ + HTA +++ G VFT+G GQLG+
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+++ N PR V L G + +A + HT
Sbjct: 278 STSHEIN--PRKVFELMGSIVTQIACGRQHT 306
Score = 256 (95.2 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 77/227 (33%), Positives = 112/227 (49%)
Query: 127 EDCKSRTPVDLLSGPVLQVV--GSGYN-----SVATEVFSWGSGANYQLGTG-NAHLQKL 178
E+C R P ++ S +Q+V GY S A+EVF WG QLG G + Q
Sbjct: 122 EEC-IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P + SL G I+A HS +T G ++ WG + G+LG D + P
Sbjct: 181 PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR------YVPN 234
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL 298
+ S L ++++ I + HT T+ G VFT+G+ GQLG+ S + PR+V L
Sbjct: 235 LLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMG 293
Query: 299 KIIA-VAAANKHT-AVVSESGEVFTWGCNREGQLGYG-TSNSASNYT 342
I+ +A +HT A V SG ++++G GQLG G TSN S +T
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 180 (68.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 61/221 (27%), Positives = 98/221 (44%)
Query: 271 WGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTAVVSESGEVFTWGCNRE 327
WG+ GQLG +D + PR+ + K+ V +HT V + G V+T GCN
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTP 387
GQLG+ S P V +L +++V V+ + HT+ L G+ + A L G
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQ--VYAWGLDSDGQLG 117
Query: 388 L-------KFHRKIK----LHVVSIAAGMVHSTALTEDGALFYWASSDPD-----LRC-- 429
L + R IK + +V +A G HS AL++ +F W + + C
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 430 ----QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK 466
Q + S+ G + I+AG + +T +G ++ W K
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNK 218
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 279 (103.3 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 92/329 (27%), Positives = 142/329 (43%)
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQ 167
FG L + + I LE KS D ++ VG G VF G Y
Sbjct: 9 FGQLGLGGI----DEEIVLEPRKS----DFFINKRVRDVGCGLRHT---VFVLDDGTVYT 57
Query: 168 LGT------GNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
G G+ +K P +V +L I +S + H++A+ G+VY WG G+LG
Sbjct: 58 CGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 222 HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY 281
+ + + PR + S L ++ +A +H++ ++ EVF WG N+ GQLG
Sbjct: 118 -----LVGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 282 -TSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
T Q +P+ + SL + + VAA H+ V++ SG +F WG N+ GQLG N
Sbjct: 172 GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND-- 229
Query: 340 NYTPRVVESLKGKDLVGVAAAKYHTIVL---------GADGERVIVARNLKKSGSTPLKF 390
Y P +++SL+ + +V + + HT L GA G + N P K
Sbjct: 230 RYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL-GHNSTSHEINPRKV 288
Query: 391 HRKIKLHVVSIAAGMVHSTALTEDGALFY 419
+ V IA G H++A Y
Sbjct: 289 FELMGSIVTEIACGRQHTSAFVPSSGRIY 317
Score = 256 (95.2 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 77/227 (33%), Positives = 112/227 (49%)
Query: 127 EDCKSRTPVDLLSGPVLQVV--GSGYN-----SVATEVFSWGSGANYQLGTG-NAHLQKL 178
E+C R P ++ S +Q+V GY S A+EVF WG QLG G + Q
Sbjct: 122 EEC-IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P + SL G ++A HS +T G ++ WG + G+LG D + P
Sbjct: 181 PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR------YVPN 234
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL 298
+ S L S+++ I + HT T+ G VFT+G+ GQLG+ S + PR+V L
Sbjct: 235 LLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMG 293
Query: 299 KIIA-VAAANKHT-AVVSESGEVFTWGCNREGQLGYG-TSNSASNYT 342
I+ +A +HT A V SG ++++G GQLG G TSN S +T
Sbjct: 294 SIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 238 (88.8 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 65/219 (29%), Positives = 104/219 (47%)
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G+LG D + V+ PR+ + ++RV+ + HTV + G V+T
Sbjct: 4 WGNASFGQLGLGGID----EEIVLEPRKSDFFI-NKRVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
G N GQLG+ ++ P +V +L + I+AV+ HT +++ G+V+ WG + +GQL
Sbjct: 59 GCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK--------- 381
G S PR ++SL +V VA YH++ L E +N
Sbjct: 117 GLVGSEECIR-VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175
Query: 382 KSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW 420
K ++P + + + +AAG HS LT GA+F W
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Score = 177 (67.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 60/221 (27%), Positives = 98/221 (44%)
Query: 271 WGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTAVVSESGEVFTWGCNRE 327
WG+ GQLG +D + PR+ + ++ V +HT V + G V+T GCN
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTP 387
GQLG+ S P V +L +++V V+ + HT+ L G+ + A L G
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQ--VYAWGLDSDGQLG 117
Query: 388 L-------KFHRKIK----LHVVSIAAGMVHSTALTEDGALFYWASSD-------PDLRC 429
L + R IK + +V +A G HS AL++ +F W + D +
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 430 QQ----LYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK 466
Q L S+ G + ++AG + +T +G ++ W K
Sbjct: 178 QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 278 (102.9 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 156 EVFSWGSGANYQLGTGNAHLQ-KLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
++FSWG+G++ QLG +P + L+ I +S +H +A+ + G+ +TWG
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G+LG + + +P+RV S L + +AA H+ + G VF WG N
Sbjct: 164 NSHGQLG-----LGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 275 REGQLGYTSVDTQPTPRRVSSLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
GQLG + + +P V L+ K++ ++ +HTAV+++SG VFT+G GQLG+
Sbjct: 218 NAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
+ N N PR V L G ++ +A + HT+ L
Sbjct: 278 SVNDEVN--PRRVLELMGSEVTQIACGRQHTLAL 309
Score = 277 (102.6 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 87/303 (28%), Positives = 143/303 (47%)
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRV 249
IK ++ HSV + GEVYT G G+LGH G P ++ L + +
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE----REGNK----PEQI-GALADQHI 86
Query: 250 KTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLK-IIAVAAAN 307
+A + H++ ++ G++F+WG+ +GQLG T+ D+ PR + L + I+ V+ N
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN 146
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
H ++ G+ FTWG N GQLG G S +P+ V SL+G L VAA H+ L
Sbjct: 147 WHCLALAADGQFFTWGKNSHGQLGLG-KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 368 GADGERVIVARNLKKSGSTPLKFHRK------IKL----HVVSIAAGMVHSTALTEDGAL 417
G + + +G L + +KL VV I+ G H+ LT+ G +
Sbjct: 206 SLSG--AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 418 F-YWASS---------DPDLRCQQLYSMCGRNVVSISAGKYWTAA-VTATGDVYMWD-GK 465
F + A S + ++ +++ + G V I+ G+ T A V ++G +Y + G
Sbjct: 264 FTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 466 KSK 468
K +
Sbjct: 324 KGQ 326
Score = 263 (97.6 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 68/223 (30%), Positives = 113/223 (50%)
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WGY LG P I S ++ +V + R +K +A +H+V E GEV+T
Sbjct: 4 WGYWS---LGQPG--ISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTC 58
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
G N +GQLG+ +P ++ +L + II VA H+ +S+ G++F+WG +GQL
Sbjct: 59 GVNTKGQLGHEREGNKP--EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 116
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN------LKK-- 382
G T+ S PR+++ L + ++ V+ +H + L ADG+ +N L K
Sbjct: 117 GLMTTED-SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF 175
Query: 383 -SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD 424
S ++P + + + +AAG HS AL+ GA+F W ++
Sbjct: 176 PSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Score = 258 (95.9 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 69/203 (33%), Positives = 107/203 (52%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAH-LQKLPCKVDSLHGFVIKLISAA 196
+LQV ++ +A + F+WG ++ QLG G Q P +V SL G + ++A
Sbjct: 139 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAG 198
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
HS A++ G V+ WG G+LG D +P V L +++V I+ +
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE------SPCHVKL-LRTQKVVYISCGE 251
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHT-AVVS 314
HT + T+ G VFT+G+ GQLG+ SV+ + PRRV L ++ +A +HT A+V
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP 311
Query: 315 ESGEVFTWGCNREGQLGYG-TSN 336
SG ++ +GC +GQLG G T N
Sbjct: 312 SSGLIYAFGCGAKGQLGTGHTCN 334
Score = 176 (67.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 50/149 (33%), Positives = 71/149 (47%)
Query: 138 LSG-PVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
L G P+ QV G +S A VF WG QLG + ++ PC V L +
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
IS + H+ +T G V+T+G G G+LGH + + PRRV +GS V I
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE------VNPRRVLELMGSE-VTQI 299
Query: 253 AAAKHHTV-LATEGGEVFTWGSNREGQLG 280
A + HT+ L G ++ +G +GQLG
Sbjct: 300 ACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 279 (103.3 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 88/287 (30%), Positives = 126/287 (43%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EVF+WG + +LG G P ++SL I ++ +FH+ AVT GE+YTWG G
Sbjct: 292 EVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDG 351
Query: 216 --RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
G LGH D+ P+R++ L ++ +++ HT L T G++FT+G
Sbjct: 352 THNAGLLGHGT-DVSHW-----IPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGD 405
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSE-----------SGEVFT 321
G LG+ +T PR V SL L+ IAVA H A + E SG++FT
Sbjct: 406 GTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFT 465
Query: 322 WGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVAR--- 378
WG + +LG+G + P V +L VA T+ L G+ +
Sbjct: 466 WGDGDKSRLGHG--DKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVY 523
Query: 379 ----NLKKSGSTPLKFHRKI-KLHVVSIAAGMVHSTALTEDGALFYW 420
N G P K+ K V IA G H LT +F W
Sbjct: 524 GQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTW 570
Score = 247 (92.0 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 64/210 (30%), Positives = 108/210 (51%)
Query: 163 GANYQLG-TGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
GA+ +G G+ +P ++S + I+ H+ V+ GEV+TWG GGRLG
Sbjct: 246 GADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLG 305
Query: 222 HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG--SNREGQL 279
H G +T ++ L + + +A + HT T GE++TWG ++ G L
Sbjct: 306 H-------GMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLL 358
Query: 280 GYTSVDTQPTPRRVSS-LK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNS 337
G+ + + P+R+S L+ L+I +V+ HTA+++ +G++FT+G G LG+G +
Sbjct: 359 GHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET 418
Query: 338 ASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
+ PR VESL G + VA +H +
Sbjct: 419 V--FYPREVESLSGLRTIAVACGVWHAAAI 446
Score = 204 (76.9 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 72/252 (28%), Positives = 113/252 (44%)
Query: 138 LSGPV--LQVV----GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF 188
+SGP+ LQ+ G + ++ T ++F++G G LG G+ P +V+SL G
Sbjct: 372 ISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGL 431
Query: 189 VIKLISAAKFHSVAVT-----------SLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITP 237
++ +H+ A+ S G+++TWG G RLGH D + + P
Sbjct: 432 RTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPR------LKP 485
Query: 238 RRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK 297
V S L +A TV T G+V+T GS GQLG + D + P V
Sbjct: 486 TCV-SALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGK-LPCLVEDKL 543
Query: 298 LK--IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV 355
K + +A H AV++ EVFTWG G+LG+G P +V++LK + +
Sbjct: 544 TKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRK--APTLVDALKERHVK 601
Query: 356 GVAAAKYHTIVL 367
+A T +
Sbjct: 602 NIACGSNFTAAI 613
Score = 202 (76.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 63/225 (28%), Positives = 105/225 (46%)
Query: 205 SLGEVYTWGYGRGGRLGHPDFDIHSG----QAAVITPRRVTSGLGSRRVKTIAAAKHHTV 260
+LG+VY WG + D + G ++ V+ P+ + S + V IA H
Sbjct: 227 ALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNV-VLDVHHIACGVKHAA 285
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVVSESGEV 319
L + GEVFTWG G+LG+ P+ + SL I VA HT V+ +GE+
Sbjct: 286 LVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEI 345
Query: 320 FTWG--CNREGQLGYGTSNSASNYTP-RVVESLKGKDLVGVAAAKYHTIVLGA------- 369
+TWG + G LG+GT S++ P R+ L+G + V+ +HT ++ +
Sbjct: 346 YTWGDGTHNAGLLGHGTD--VSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTF 403
Query: 370 -DGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTE 413
DG ++ K++ P + L +++A G+ H+ A+ E
Sbjct: 404 GDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVE 448
Score = 153 (58.9 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 48/163 (29%), Positives = 76/163 (46%)
Query: 268 VFTWGSNRE-GQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNR 326
V +G+++ G LG S P P S++ L + +A KH A+VS GEVFTWG
Sbjct: 242 VTKFGADKNIGYLGSRSDVLIPKPLE-SNVVLDVHHIACGVKHAALVSRQGEVFTWGEAS 300
Query: 327 EGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSG-- 384
G+LG+G + P+++ESL + VA ++HT + GE +G
Sbjct: 301 GGRLGHGMGKDVTG--PQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLL 358
Query: 385 --STPLK--FHRKIK-----LHVVSIAAGMVHSTALTEDGALF 418
T + ++I L + S++ G H+ +T G LF
Sbjct: 359 GHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLF 401
Score = 59 (25.8 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 390 FHRKIKLHVVSIA---AGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAG 446
FHR H +++ +G V++ T G L ++D L C + V I+ G
Sbjct: 496 FHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGN-PNADGKLPCLVEDKLTKDCVEEIACG 554
Query: 447 KYWTAAVTATGDVYMWDGK 465
Y A +T+ +V+ W GK
Sbjct: 555 AYHVAVLTSRNEVFTW-GK 572
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 288 (106.4 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 78/253 (30%), Positives = 126/253 (49%)
Query: 131 SRTPVDLLSGP----VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKLPCKV 182
SR P L +G +LQ ++S+ V+S G + QLG + P +
Sbjct: 9 SRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPI 68
Query: 183 DSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTS 242
+L+ + L+S K HSVAV G+V+ WG G G+LG +F S P ++ +
Sbjct: 69 QALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEIS-----FMPTKIKA 123
Query: 243 GLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLK-LKI 300
G + ++ ++ +H++ +E G VF+WG N EGQLG + +Q P++V SL+ + +
Sbjct: 124 LAGIKIIQ-VSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPL 182
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGY-GTSNSASNYTPRVVESLKGKDLVGVAA 359
VAA H+ +S +G F WG NR GQL G Y P + +LK ++ ++
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242
Query: 360 AKYHTIVLGADGE 372
HT VL +G+
Sbjct: 243 GYEHTAVLTEEGQ 255
Score = 284 (105.0 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 98/310 (31%), Positives = 142/310 (45%)
Query: 190 IKLISAA--KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
I+L+ AA + HS+ + S VY+ G G+LG Q+ P + + L
Sbjct: 22 IELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQ-----RRDQSTE-RPEPIQA-LNDL 74
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG---YTSVDTQPTPRRVSSLK-LKIIAV 303
V ++ K H+V G+VF WG+ EGQLG + + PT ++ +L +KII V
Sbjct: 75 HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPT--KIKALAGIKIIQV 132
Query: 304 AAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYH 363
+ + H+ +SE G VF+WG N EGQLG G NS S P+ V+SL+G L VAA H
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGLG-KNSRSQAIPQKVKSLEGIPLAQVAAGGTH 191
Query: 364 TIVL---------GAD--GERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALT 412
+ L G++ G+ + +K+ P L V+ I+ G H+ LT
Sbjct: 192 SFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLT 251
Query: 413 EDGALF-YWASSDPDL--------RCQQLYSMCGRNVVSISAGKYWTAA-VTATGDVY-M 461
E+G +F + +S L R QL G V I Y T A V TG V +
Sbjct: 252 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSL 311
Query: 462 WDGKKSKDNP 471
G NP
Sbjct: 312 GRGPSHTSNP 321
Score = 228 (85.3 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 78/281 (27%), Positives = 125/281 (44%)
Query: 133 TPVDLLSG-PVLQVVGSGYNSVATE----VFSWGSGANYQLGTG-NAHLQKLPCKVDSLH 186
T + L+G ++QV Y+S+A VFSWG + QLG G N+ Q +P KV SL
Sbjct: 119 TKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLE 178
Query: 187 GFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGS 246
G + ++A HS A++ G + WG R G+L + + + P + L +
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKV---KEQIYKPHSI-GALKN 234
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAA 306
V I+ HT + TE G+VFT+G N GQL + Q P+ + + ++ + A
Sbjct: 235 LSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECA 294
Query: 307 NKHT-AVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTI 365
+ HT A V +G+V + G T A + L +DLV + + I
Sbjct: 295 SYHTIAYVYTTGQVVSLG-RGPSHTSNPTHQEAPAENSDITCLLAAEDLVDI---EVKDI 350
Query: 366 VLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMV 406
GA + R + + ST + KI ++ I +V
Sbjct: 351 FAGAHAN-FVTTRRVSHTRSTGVSM--KILPEIIRINQSLV 388
Score = 134 (52.2 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 46/200 (23%), Positives = 89/200 (44%)
Query: 290 PRRVSS--LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE 347
PRR+ + ++++ A+ H+ ++ + V++ G N GQLG S P ++
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTER--PEPIQ 69
Query: 348 SLKGKDLVGVAAAKYHTIVL---------GADGERVIVARNLKKSGSTPLKFHRKIKLHV 398
+L + V+ K H++ + GA E + K+ P K + +
Sbjct: 70 ALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKI 129
Query: 399 VSIAAGMVHSTALTEDGALFYWA-SSDPDLRC----------QQLYSMCGRNVVSISAGK 447
+ ++ G HS AL+EDG +F W +S+ L Q++ S+ G + ++AG
Sbjct: 130 IQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 189
Query: 448 YWTAAVTATGDVYMWDGKKS 467
+ A++ TG + W +S
Sbjct: 190 THSFALSLTGTSFGWGSNRS 209
Score = 42 (19.8 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 15/71 (21%), Positives = 32/71 (45%)
Query: 690 KADANQEISKQVRALRKKLQQIEMLEVKLSNGHILDEQQIAKLQTKSVLERSLAELGVPI 749
K D+ ++ +V A +K+ L +K+ H++++ Q + R +G
Sbjct: 634 KCDSFVKLMSEVMAFPEKMSSPPYLILKVRRSHLVEDTLRQLRQVEDFDLRKQLSVGFIN 693
Query: 750 EL-PQAIAASA 759
E+ P+A S+
Sbjct: 694 EIRPEAGGVSS 704
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 275 (101.9 bits), Expect = 7.1e-20, P = 7.1e-20
Identities = 92/330 (27%), Positives = 143/330 (43%)
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQ 167
FG L + + I LE KS D ++ VG G VF G Y
Sbjct: 9 FGQLGLGGI----DEEIVLEPRKS----DFFINKKVRDVGCGLRHT---VFVLDDGTVYT 57
Query: 168 LGT------GNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
G G+ +K P +V +L I +S + H++A+ G+VY WG G+LG
Sbjct: 58 CGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 222 HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY 281
+ + + PR + S L ++ +A +H++ ++ EVF WG N+ GQLG
Sbjct: 118 -----LLGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 282 TSVDT--QPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSA 338
+D Q +P+ + SL + + VAA H+ V++ SG +F WG N+ GQLG N
Sbjct: 172 -GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND- 229
Query: 339 SNYTPRVVESLKGKDLVGVAAAKYHTIVL---------GADGERVIVARNLKKSGSTPLK 389
Y P +++SL+ + +V + + HT L GA G + N P K
Sbjct: 230 -RYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL-GHNSTSHEINPRK 287
Query: 390 FHRKIKLHVVSIAAGMVHSTALTEDGALFY 419
+ V IA G H++A Y
Sbjct: 288 VFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Score = 255 (94.8 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 76/227 (33%), Positives = 112/227 (49%)
Query: 127 EDCKSRTPVDLLSGPVLQVV--GSGYN-----SVATEVFSWGSGANYQLGTG-NAHLQKL 178
E+C R P ++ S +Q+V GY S A+EVF WG QLG G + Q
Sbjct: 122 EEC-IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P + SL G ++A HS +T G ++ WG + G+LG D + P
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR------YVPN 234
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL 298
+ S L ++++ I + HT T+ G VFT+G+ GQLG+ S + PR+V L
Sbjct: 235 LLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMG 293
Query: 299 KIIA-VAAANKHT-AVVSESGEVFTWGCNREGQLGYG-TSNSASNYT 342
I+ +A +HT A V SG ++++G GQLG G TSN S +T
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 235 (87.8 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 66/220 (30%), Positives = 104/220 (47%)
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G+LG D + V+ PR+ + +++V+ + HTV + G V+T
Sbjct: 4 WGNASFGQLGLGGID----EEIVLEPRKSDFFI-NKKVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
G N GQLG+ ++ P +V +L + I+AV+ HT +++ G+V+ WG + +GQL
Sbjct: 59 GCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN----------L 380
G S PR ++SL +V VA YH++ L E +N
Sbjct: 117 GLLGSEECIR-VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175
Query: 381 KKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW 420
KK S P + + + +AAG HS LT GA+F W
Sbjct: 176 KKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Score = 179 (68.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 60/221 (27%), Positives = 98/221 (44%)
Query: 271 WGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTAVVSESGEVFTWGCNRE 327
WG+ GQLG +D + PR+ + K+ V +HT V + G V+T GCN
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTP 387
GQLG+ S P V +L +++V V+ + HT+ L G+ + A L G
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQ--VYAWGLDSDGQLG 117
Query: 388 L-------KFHRKIK----LHVVSIAAGMVHSTALTEDGALFYWASSDPD-----LRC-- 429
L + R IK + +V +A G HS AL++ +F W + + C
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 430 ----QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK 466
Q + S+ G + ++AG + +T +G ++ W K
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 275 (101.9 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 92/330 (27%), Positives = 143/330 (43%)
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQ 167
FG L + + I LE KS D ++ VG G VF G Y
Sbjct: 9 FGQLGLGGI----DEEIVLEPRKS----DFFINKKVRDVGCGLRHT---VFVLDDGTVYT 57
Query: 168 LGT------GNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
G G+ +K P +V +L I +S + H++A+ G+VY WG G+LG
Sbjct: 58 CGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 222 HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY 281
+ + + PR + S L ++ +A +H++ ++ EVF WG N+ GQLG
Sbjct: 118 -----LLGSEECIRVPRNIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 282 TSVDT--QPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSA 338
+D Q +P+ + SL + + VAA H+ V++ SG +F WG N+ GQLG N
Sbjct: 172 -GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND- 229
Query: 339 SNYTPRVVESLKGKDLVGVAAAKYHTIVL---------GADGERVIVARNLKKSGSTPLK 389
Y P +++SL+ + +V + + HT L GA G + N P K
Sbjct: 230 -RYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL-GHNSTSHEINPRK 287
Query: 390 FHRKIKLHVVSIAAGMVHSTALTEDGALFY 419
+ V IA G H++A Y
Sbjct: 288 VFELMGSIVTQIACGRQHTSAFVPSSGRIY 317
Score = 255 (94.8 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 76/227 (33%), Positives = 112/227 (49%)
Query: 127 EDCKSRTPVDLLSGPVLQVV--GSGYN-----SVATEVFSWGSGANYQLGTG-NAHLQKL 178
E+C R P ++ S +Q+V GY S A+EVF WG QLG G + Q
Sbjct: 122 EEC-IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P + SL G ++A HS +T G ++ WG + G+LG D + P
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR------YVPN 234
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL 298
+ S L ++++ I + HT T+ G VFT+G+ GQLG+ S + PR+V L
Sbjct: 235 LLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMG 293
Query: 299 KIIA-VAAANKHT-AVVSESGEVFTWGCNREGQLGYG-TSNSASNYT 342
I+ +A +HT A V SG ++++G GQLG G TSN S +T
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Score = 235 (87.8 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 66/220 (30%), Positives = 104/220 (47%)
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G+LG D + V+ PR+ + +++V+ + HTV + G V+T
Sbjct: 4 WGNASFGQLGLGGID----EEIVLEPRKSDFFI-NKKVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
G N GQLG+ ++ P +V +L + I+AV+ HT +++ G+V+ WG + +GQL
Sbjct: 59 GCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN----------L 380
G S PR ++SL +V VA YH++ L E +N
Sbjct: 117 GLLGSEECIR-VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175
Query: 381 KKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW 420
KK S P + + + +AAG HS LT GA+F W
Sbjct: 176 KKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Score = 179 (68.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 60/221 (27%), Positives = 98/221 (44%)
Query: 271 WGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTAVVSESGEVFTWGCNRE 327
WG+ GQLG +D + PR+ + K+ V +HT V + G V+T GCN
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTP 387
GQLG+ S P V +L +++V V+ + HT+ L G+ + A L G
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQ--VYAWGLDSDGQLG 117
Query: 388 L-------KFHRKIK----LHVVSIAAGMVHSTALTEDGALFYWASSDPD-----LRC-- 429
L + R IK + +V +A G HS AL++ +F W + + C
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 430 ----QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK 466
Q + S+ G + ++AG + +T +G ++ W K
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 274 (101.5 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 89/328 (27%), Positives = 152/328 (46%)
Query: 160 WGSGANYQLGTGNAHLQKLPCKVDSLHGFV----IKLISAAKFHSVAVTSLGEVYTWGYG 215
WG + Q G + +LQ + + + GF+ +K ++ HSV + GEVYT G
Sbjct: 4 WGYWSLGQPGI-SPNLQGIVAE-PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVN 61
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
G+LGH G P ++ L + + +A + H++ ++ G++F+WG+
Sbjct: 62 TKGQLGHE----REGNK----PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112
Query: 276 EGQLGYTSV-DTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
+GQLG ++ D+ PR + L + I+ V+ N H ++ G+ FTWG N GQLG G
Sbjct: 113 DGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLG 172
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRK 393
S +P+ V SL+G L V A H+ L G + + +G L +
Sbjct: 173 -KEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSG--AVFGWGMNNAGQLGLSDEKD 229
Query: 394 ------IKL----HVVSIAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQLY 433
+KL VV I+ G H+ LT+ G +F + S + ++ +++
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289
Query: 434 SMCGRNVVSISAGKYWTAA-VTATGDVY 460
+ G V I+ G+ T A V ++G +Y
Sbjct: 290 ELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Score = 257 (95.5 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 83/292 (28%), Positives = 138/292 (47%)
Query: 124 ITLEDCKS--RTPVDLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAH-LQ 176
+T+ED + R L +LQV ++ +A + F+WG ++ QLG G Q
Sbjct: 119 MTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQ 178
Query: 177 KLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVIT 236
P +V SL G + + A HS A++ G V+ WG G+LG D +
Sbjct: 179 ASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE------S 232
Query: 237 PRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL 296
P V L +++V I+ + HT + T+ G VFT+G+ GQLG+ S++ + PRRV L
Sbjct: 233 PCHVKL-LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 297 K-LKIIAVAAANKHT-AVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESL----K 350
++ +A +HT A V SG ++ +GC GQLG T ++ + P V+
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG--TGHTCNVKCPSPVKGYWAAHS 349
Query: 351 GKDLVGVAAAKYHTIV-LGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSI 401
G+ KYH + + + G++ V + ++ S + F + H S+
Sbjct: 350 GQLSARADRFKYHIVKQIFSGGDQTFVLCSKYENSSPAVDFRMMNQAHYTSL 401
Score = 252 (93.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 77/274 (28%), Positives = 129/274 (47%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EV++ G QLG + P ++ +L I ++ + HS+A++ G++++WG G
Sbjct: 54 EVYTCGVNTKGQLG--HEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAG 111
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
G+LG + + + +V PR + L + + ++ H + G+ FTWG N
Sbjct: 112 SDGQLG-----LMTIEDSVAVPRLIQK-LNQQTILQVSCGNWHCLALAADGQFFTWGRNS 165
Query: 276 EGQLGY-TSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
GQLG +Q +P+RV SL+ + + V A H+ +S SG VF WG N GQLG
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL- 224
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLG-ADGERVIVARNLKKSGSTPLKFH- 391
S+ +P V+ L+ + +V ++ + HT VL + G A + + G +
Sbjct: 225 -SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV 283
Query: 392 ---RKIKL---HVVSIAAGMVHSTALTEDGALFY 419
R ++L V IA G H+ A L Y
Sbjct: 284 NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 271 (100.5 bits), Expect = 9.9e-20, P = 9.9e-20
Identities = 82/260 (31%), Positives = 127/260 (48%)
Query: 120 SGASITLEDCKSRTPVDLLS-----GPVLQVVGSGYNSVA-TE---VFSWGSGANYQLGT 170
S + L D + RT L+S + Q+ Y S A TE +F WG + Q+G
Sbjct: 117 SEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGL 176
Query: 171 GNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSG 230
+ +PC+VD G + IS +HS +T GE+YT+G G+LG + +
Sbjct: 177 ADKTCVSVPCQVDV--GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNS 234
Query: 231 QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPT 289
+ P+ V G+ +V +A HTV+ TE G V+T+G + GQLG+ T +
Sbjct: 235 RV----PQPVL-GI-MEKVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSV 287
Query: 290 PRRVSSLKL-KIIAVAAANKHTAVVS--ESGEVFTWGCNREGQLGYGTSNSASNYTPRVV 346
P+ V L+ KI V HTAV++ E+G +FT+G R G+LG G N A+ + P +
Sbjct: 288 PKSVKHLRSHKIHNVTCGESHTAVIADTENGLMFTFGDGRHGKLGLGEENFANQFDPALC 347
Query: 347 ESLKGKDLVGVAAAKYHTIV 366
+ ++ VA H +V
Sbjct: 348 SNFLSFTVLLVACGGCHMLV 367
Score = 231 (86.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 70/237 (29%), Positives = 118/237 (49%)
Query: 143 LQVVGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSL--HGFVIKLISAAK 197
L V G + V TE V++ G + QLG G+ ++ + S + IK ++A
Sbjct: 93 LAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTE-ERTTFHLISFFTNQHKIKQLAAGS 151
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
+ S AVT G+++ WG G++G D + V P +V G + V +I+ +
Sbjct: 152 YTSAAVTEDGQLFVWGDNSEGQIGLAD------KTCVSVPCQVDVG---KPVSSISCGYY 202
Query: 258 HTVLATEGGEVFTWGSNREGQLGYT--SVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSE 315
H+ T GE++T+G G+LG + P+ V + K+ VA +HT V++E
Sbjct: 203 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 262
Query: 316 SGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
+G V+T+G + GQLG+GT ++ P+ V+ L+ + V + HT V+ AD E
Sbjct: 263 TG-VYTFGLGQYGQLGHGTLLFKTS-VPKSVKHLRSHKIHNVTCGESHTAVI-ADTE 316
Score = 220 (82.5 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 77/265 (29%), Positives = 113/265 (42%)
Query: 162 SGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
SGA + G N + +P K + + IS H+ VT G++Y +G G+LG
Sbjct: 13 SGAVFTFGKSN-FAENIPSKFWFKNDKPVH-ISCGDEHTAVVTGNGKLYMFGSNDWGQLG 70
Query: 222 HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY 281
G + L + K ++HT++ TE G V+ G N EGQLG
Sbjct: 71 -------LGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGL 123
Query: 282 TSVDTQPTPRRVSSL--KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
+ + T +S + KI +AA + +A V+E G++F WG N EGQ+G S
Sbjct: 124 GDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVS 183
Query: 340 NYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK-KSGSTP--LKFHRK--- 393
P V+ GK + ++ YH+ + DGE K G P LK R
Sbjct: 184 --VPCQVDV--GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQP 239
Query: 394 ---IKLHVVSIAAGMVHSTALTEDG 415
I V +A G H+ LTE G
Sbjct: 240 VLGIMEKVNKVACGGEHTVVLTETG 264
Score = 215 (80.7 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 69/276 (25%), Positives = 119/276 (43%)
Query: 141 PVLQVVGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAK 197
PV G + +V T +++ +GS QLG G+ + + P V +L KL +
Sbjct: 39 PVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGR 98
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
H++ T G VY G G+LG D + + T ++ ++K +AA +
Sbjct: 99 NHTLVYTEKGNVYAAGGNSEGQLGLGDTEERT------TFHLISFFTNQHKIKQLAAGSY 152
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESG 317
+ TE G++F WG N EGQ+G P +V K + +++ H+A ++ G
Sbjct: 153 TSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGK-PVSSISCGYYHSAFITGDG 211
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA 377
E++T+G G+LG ++ P+ V + K + VA HT+VL G
Sbjct: 212 ELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEK-VNKVACGGEHTVVLTETGVYTFGL 270
Query: 378 RNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTE 413
+ G L F + V + + +H+ E
Sbjct: 271 GQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGE 306
Score = 172 (65.6 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 62/223 (27%), Positives = 98/223 (43%)
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVS 314
A+ + E G VFT+G + + P + K + ++ ++HTAVV+
Sbjct: 3 AEEEELPVPESGAVFTFGKSNFAE---------NIPSKFWFKNDKPVHISCGDEHTAVVT 53
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
+G+++ +G N GQLG G+ N+ P V++LK + + HT+V G
Sbjct: 54 GNGKLYMFGSNDWGQLGLGSKNTVRK--PTCVKALKPEKTKLAVCGRNHTLVYTEKGNVY 111
Query: 375 IVARNLKKS---GSTPLK--FHRK---IKLHVVS-IAAGMVHSTALTEDGALFYWASSDP 425
N + G T + FH H + +AAG S A+TEDG LF W +
Sbjct: 112 AAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSE 171
Query: 426 ------DLRCQQLYSMC--GRNVVSISAGKYWTAAVTATGDVY 460
D C + G+ V SIS G Y +A +T G++Y
Sbjct: 172 GQIGLADKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELY 214
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 279 (103.3 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 92/329 (27%), Positives = 139/329 (42%)
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQ 167
FG L + + I LE KS D ++ VG G VF G Y
Sbjct: 9 FGQLGLGGI----DEEIVLEPRKS----DFFLNKRIRDVGCGLRHT---VFVLDDGTVYT 57
Query: 168 LGT------GNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
G G+ +K P V +L I +S + H++A+ G+VY WG G+LG
Sbjct: 58 CGCNDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117
Query: 222 HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY 281
P + + PR + S L ++ +A +H++ ++G EVF+WG N+ GQLG
Sbjct: 118 LP-----GTEECIRVPRNIKS-LSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171
Query: 282 T-SVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
Q +P + SL + +AA H+ V++ SG +F WG N+ GQLG N
Sbjct: 172 GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDND-- 229
Query: 340 NYTPRVVESLKGKDLVGVAAAKYHTIVL---------GADGERVIVARNLKKSGSTPLKF 390
Y P +++SL+ + +V + + HT L GA G + N P K
Sbjct: 230 RYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQL-GHNSTSHEINPRKV 288
Query: 391 HRKIKLHVVSIAAGMVHSTALTEDGALFY 419
+ V I G H+TA Y
Sbjct: 289 FELMGSLVTQITCGRQHTTAFVPSSGRIY 317
Score = 257 (95.5 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 78/228 (34%), Positives = 116/228 (50%)
Query: 127 EDCKSRTPVDLLSGPVLQVV--GSGY-NSVA----TEVFSWGSGANYQLGTGNAHL-QKL 178
E+C R P ++ S +Q+V GY +S+A +EVFSWG QLG G + Q
Sbjct: 122 EEC-IRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNS 180
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG-HPDFDIHSGQAAVITP 237
P + SL G I+A HS +T G ++ WG + G+LG + D D + P
Sbjct: 181 PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY-------VP 233
Query: 238 RRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK 297
+ S L +++V I + HT T+ G VFT+G+ GQLG+ S + PR+V L
Sbjct: 234 TLLKS-LRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292
Query: 298 LKIIA-VAAANKHT-AVVSESGEVFTWGCNREGQLGYGT-SNSASNYT 342
++ + +HT A V SG ++++G GQLG GT SN S +T
Sbjct: 293 GSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFT 340
Score = 255 (94.8 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 84/272 (30%), Positives = 125/272 (45%)
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G+LG D + V+ PR+ L ++R++ + HTV + G V+T
Sbjct: 4 WGNASFGQLGLGGID----EEIVLEPRKSDFFL-NKRIRDVGCGLRHTVFVLDDGTVYTC 58
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
G N GQLG+ + P V +L + I+AV+ HT +++ G+V+ WG +GQL
Sbjct: 59 GCNDLGQLGHEKA--RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 331 GY-GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPL- 388
G GT PR ++SL +V VA YH++ L E +N K G L
Sbjct: 117 GLPGTEECIR--VPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQN--KYGQLGLG 172
Query: 389 -KFHRKIKLHVVS---------IAAGMVHSTALTEDGALFYWA---------SSDPDLRC 429
++ ++ HV+ IAAG HS LT GA+F W + D D
Sbjct: 173 YEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV 232
Query: 430 QQLY-SMCGRNVVSISAGKYWTAAVTATGDVY 460
L S+ + VV I G+ TAA+T G V+
Sbjct: 233 PTLLKSLRTQKVVHICCGEDHTAALTKEGGVF 264
Score = 44 (20.5 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 506 PNVAKNPQKLKLNGRNDLEEFYEDFMFNDESNNMPSA 542
PN A P +K N R D + Y D++FN ++ SA
Sbjct: 872 PNGADIPV-VKHN-RQDFVDAYVDYIFNKSVASLFSA 906
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 266 (98.7 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 78/272 (28%), Positives = 134/272 (49%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAH-LQKLPCKVDSLHGFVIKLISAA 196
+LQV ++ +A + F+WG ++ QLG G + Q P +V SL G + ++A
Sbjct: 139 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAG 198
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
HS A++ G V+ WG G+LG D + +P V L +++V I+ +
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE------SPCHVKL-LRTQKVVYISCGE 251
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHT-AVVS 314
HT + T+ G VFT+G+ GQLG+ S++ + PRRV L ++ +A +HT A V
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP 311
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESL----KGKDLVGVAAAKYHTIV-LGA 369
SG ++ +GC +GQLG T ++ + P V+ G+ KYH + + +
Sbjct: 312 SSGLIYAFGCGAKGQLG--TGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFS 369
Query: 370 DGERVIVARNLKKSGSTPLKFHRKIKLHVVSI 401
G++ V + ++ S + F + H S+
Sbjct: 370 GGDQTFVLCSKYENSSPAVDFRTMNQAHYTSL 401
Score = 262 (97.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 69/223 (30%), Positives = 113/223 (50%)
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WGY LG P + Q V P+ V + R VK +A +H+V E GEV+T
Sbjct: 4 WGYWS---LGQPGISTNL-QGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTC 58
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
G N +GQLG+ +P ++ +L + I+ VA H+ +S+ G++F+WG +GQL
Sbjct: 59 GLNTKGQLGHEREGNKP--EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL 116
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN------LKK-- 382
G T+ S PR+++ L + ++ V+ +H + L ADG+ +N L K
Sbjct: 117 GLMTTED-SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEY 175
Query: 383 -SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD 424
S ++P + + + +AAG HS AL+ GA+F W ++
Sbjct: 176 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Score = 261 (96.9 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 89/317 (28%), Positives = 146/317 (46%)
Query: 119 QSGASITLEDCKSRTPV-DLLSG-PVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGN 172
Q G S L+ + V +S V +V G +SV EV++ G QLG +
Sbjct: 11 QPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG--H 68
Query: 173 AHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQA 232
P ++ +L I ++ + HS+A++ G++++WG G G+LG + + +
Sbjct: 69 EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG-----LMTTED 123
Query: 233 AVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPR 291
+V PR + L + + ++ H + G+ FTWG N GQLG +Q +P+
Sbjct: 124 SVAVPRLIQK-LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQ 182
Query: 292 RVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLK 350
RV SL+ + + VAA H+ +S SG VF WG N GQLG S+ +P V+ L+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKLLR 240
Query: 351 GKDLVGVAAAKYHTIVLG-ADGERVIVARNLKKSGSTPLKFH----RKIKL---HVVSIA 402
+ +V ++ + HT VL + G A + + G + R ++L V IA
Sbjct: 241 TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA 300
Query: 403 AGMVHSTALTEDGALFY 419
G H+ A L Y
Sbjct: 301 CGRQHTLAFVPSSGLIY 317
Score = 174 (66.3 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 49/149 (32%), Positives = 70/149 (46%)
Query: 138 LSG-PVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
L G P+ QV G +S A VF WG QLG + ++ PC V L +
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVY 246
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
IS + H+ +T G V+T+G G G+LGH + + PRRV +GS V I
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE------VNPRRVLELMGSE-VTQI 299
Query: 253 AAAKHHTV-LATEGGEVFTWGSNREGQLG 280
A + HT+ G ++ +G +GQLG
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGAKGQLG 328
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 219 (82.2 bits), Expect = 7.6e-19, Sum P(4) = 7.6e-19
Identities = 75/234 (32%), Positives = 121/234 (51%)
Query: 176 QKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGE--VYTWGYGRGGRLGHPDFDIHSGQAA 233
Q LP + + I+ ++ +K H+ +T E ++ G+G GGRLG D S + +
Sbjct: 412 QDLPAFIKA-RPLKIQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGD---ESTRFS 467
Query: 234 VITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY--------TSVD 285
+ GL +++V ++A + HT+ TE G++F+WGSN+ GQLGY V
Sbjct: 468 FVCIEG--GGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVP 525
Query: 286 TQPTPRRV-SSLKLKIIAVAAANK-HTAVVSESGEVFTWGCNREGQLGYGTSNSAS---N 340
Q +PR++ + K ++I AAA+ H+ V S SG ++T+G N EGQLG S++ S
Sbjct: 526 VQLSPRQIFNPFKKEVILGAAASAVHSVVYSTSG-LYTFGKN-EGQLGLVDSDARSLEVQ 583
Query: 341 YTPRVV-ESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRK 393
TPR V SL + V+A T +L + E + A S PL+ + +
Sbjct: 584 TTPRRVGASLFSTPIQSVSATDQATAILLQNHEVWVFAHYGYSRLSFPLEINSR 637
Score = 169 (64.5 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 49/179 (27%), Positives = 95/179 (53%)
Query: 155 TEVFSWGSGANYQLGTGNAHLQ-KLPC-KVDSLHGFVIKLISAAKFHSVAVTSLGEVYTW 212
+ +F G G +LGTG+ + C + L + ++ + H++A+T G++++W
Sbjct: 444 SNLFICGFGPGGRLGTGDESTRFSFVCIEGGGLANKKVASVALGQDHTLAITEHGDIFSW 503
Query: 213 GYGRGGRLGH--PDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
G + G+LG+ P + ++PR++ + + AA+ H+V+ + G ++T
Sbjct: 504 GSNKFGQLGYGLPRANNKDDVPVQLSPRQIFNPFKKEVILGAAASAVHSVVYSTSG-LYT 562
Query: 271 WGSNREGQLGYT-----SVDTQPTPRRV--SSLKLKIIAVAAANKHTAVVSESGEVFTW 322
+G N EGQLG S++ Q TPRRV S I +V+A ++ TA++ ++ EV+ +
Sbjct: 563 FGKN-EGQLGLVDSDARSLEVQTTPRRVGASLFSTPIQSVSATDQATAILLQNHEVWVF 620
Score = 129 (50.5 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 75/286 (26%), Positives = 127/286 (44%)
Query: 156 EVFSWGSGANYQLGTGNAHLQK---LPCKVDSLHGF------VIKLISAAKFHSVAVTSL 206
++FSWGS QLG G +P ++ F VI +A+ HSV ++
Sbjct: 499 DIFSWGSNKFGQLGYGLPRANNKDDVPVQLSPRQIFNPFKKEVILGAAASAVHSVVYSTS 558
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G +YT+G G +LG D D S + TPRRV + L S +++++A T + +
Sbjct: 559 G-LYTFGKNEG-QLGLVDSDARSLEVQT-TPRRVGASLFSTPIQSVSATDQATAILLQNH 615
Query: 267 EVFTWGSNREGQLGYTSV-------DTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEV 319
EV+ + +L + D+ R +S+ +I+ + + +S SG+V
Sbjct: 616 EVWVFAHYGYSRLSFPLEINSRFIRDSFMATRYDTSIN-RIVKIRSGGNTICALSSSGDV 674
Query: 320 FTWGCNREGQLGY--GTSNSA---SNYTPRV-VESLKGKDLV--GVAAAKYHTIVL-GAD 370
FT N+ L T+N A ++ +P V V S+K + V + +I++ A
Sbjct: 675 FTVQVNKLENLPSLTSTTNPAKIRNSLSPPVRVWSVKKAHMAVKDVDVGQDGSIIICTAS 734
Query: 371 GERVIVARNLK-KSGST-PLKFHRKIKL-HVVSIAAGMVHSTALTE 413
G R K K+GS+ KF R L VV + + + A+ +
Sbjct: 735 GSAWRKERRRKSKNGSSGEYKFARVPCLSRVVGVCSNAFGAFAVVQ 780
Score = 82 (33.9 bits), Expect = 7.6e-19, Sum P(4) = 7.6e-19
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 57 INSRNIFGLTPLH---SAIWRNQVPIVRRLLAAG-ADPDARDGESGWSSLHRALHFGHLA 112
+N+R+ G T LH S+ LL D A+D ESGW++LHRAL+ G+
Sbjct: 202 LNARDQHGRTLLHHVASSPKPTAADFALALLEVPYLDIYAQDLESGWTALHRALYAGNAT 261
Query: 113 VASVLL 118
+A L+
Sbjct: 262 IAQALM 267
Score = 71 (30.1 bits), Expect = 7.6e-19, Sum P(4) = 7.6e-19
Identities = 43/172 (25%), Positives = 69/172 (40%)
Query: 881 TP--KEIALPPPPTPRSEGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPS 938
TP K+ PP P S+ P W + +L++I SE S+ +V+ + +
Sbjct: 1302 TPQEKQNGSASPPYP-SQVP-WNSTTISGSKKTLKDIMSEASEARVSNLSLGMSSVRREN 1359
Query: 939 FGRSEGKVLLSSF--MTSKPIPVVSARAQQATDGDKSTPPWAASGTPPSLS-RPSLRNIQ 995
G K+ M + I ++ Q+A + +S PW P++ PS I
Sbjct: 1360 SGSFAPKLSQKERKKMQQQQIQEMAIAQQRAKEAAQS--PWKIPSPGPAVPVGPSTDKIT 1417
Query: 996 MQQGKQHCLSHSPKTRTAGFSIAPS-QGSPSDSPGMNRWFKPEAETPSSIRS 1046
Q + S + G ++ + G+PS P KP TPSS RS
Sbjct: 1418 NGQDIPSP-TPSKSAQRPGMTLRQTVAGAPS--PKRESAAKP---TPSSSRS 1463
Score = 58 (25.5 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 40/154 (25%), Positives = 71/154 (46%)
Query: 46 ALALLKKNGGNINSRNI-FGLTPLHSAIWRNQVPIVRRLLAA----GADPDARDGESGWS 100
ALALL+ +I ++++ G T LH A++ I + L+A DP ++ G SG
Sbjct: 228 ALALLEVPYLDIYAQDLESGWTALHRALYAGNATIAQALMARDVRDATDP-SKPGFSGHP 286
Query: 101 S--LHRAL-HFGH----LAVASVLLQS-GASIT---LEDCKSRTPVDLLSGPVLQVVGS- 148
S L + G+ + +++ +S G + L+D S + D V + +
Sbjct: 287 SGGLIKIKDREGYSPFDVYASTITSRSLGPLVPDHGLDDASSVSSSD--DEDVAEALEKP 344
Query: 149 GYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKV 182
N EVF++GS N LG G+ ++ P ++
Sbjct: 345 STNLFGDEVFTFGSNKNLNLGVGDQDDRQYPERI 378
Score = 50 (22.7 bits), Expect = 7.6e-19, Sum P(4) = 7.6e-19
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 433 YSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVS 487
Y +V I +G A++++GDV+ K ++ P L + + K S+S
Sbjct: 648 YDTSINRIVKIRSGGNTICALSSSGDVFTVQVNKLENLPSLTSTTNPAKIRNSLS 702
Score = 47 (21.6 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 35/168 (20%), Positives = 61/168 (36%)
Query: 815 SKKKEEDAMSEGNVAIEYSKQSGFLVQKKDNADSLKNNCSPQTTSXXXXXXXXG-GLSMF 873
SKK +D MSE + A + G +++N+ S S + ++
Sbjct: 1329 SKKTLKDIMSEASEARVSNLSLGMSSVRRENSGSFAPKLSQKERKKMQQQQIQEMAIAQQ 1388
Query: 874 LSGALDDTPKEIALPPPPTP--RSEGPAWGGAKVPKGSASLREIQSEQSKIK---VNQPT 928
+ +P +I P P P S G +P + S + Q ++ P+
Sbjct: 1389 RAKEAAQSPWKIPSPGPAVPVGPSTDKITNGQDIPSPTPS-KSAQRPGMTLRQTVAGAPS 1447
Query: 929 RNKDQFEDPSFGRSEGKVLLSSFMTSKPIPVVSARAQQATDGDKSTPP 976
++ P+ S V+ S T++P P+ A STPP
Sbjct: 1448 PKRESAAKPTPSSSRSHVV--SATTTRP-PLAPRPADAVAP---STPP 1489
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 264 (98.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 75/251 (29%), Positives = 125/251 (49%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQKL-PCKVDSLHGFVIKLISAA 196
++Q+ Y+S+A E+F+WG + QLG G P V+ L G + ISA
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
+ HS+A++ G +Y+WG G+LG G + GL +++V+ +A
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLG-------LGHTESKDDPSLIEGLDNQKVEFVACGG 252
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHT-AVVS 314
H+ L T+ G +FT+G+ + GQLG+ S + P V+ L ++ +A HT A VS
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVS 312
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
+ G+VF++G ++GQLG G + P V S + L + K +++ A G +
Sbjct: 313 DLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEK--ELIMIAGGNQS 370
Query: 375 IVARNLKKSGS 385
I+ +KK S
Sbjct: 371 ILLW-IKKENS 380
Score = 185 (70.2 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 58/201 (28%), Positives = 103/201 (51%)
Query: 133 TP--VDLLSG-PVLQV-VGSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSL 185
TP V+ L+G P+ Q+ G ++ S++ ++SWG QLG G+ + P ++ L
Sbjct: 181 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240
Query: 186 HGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLG 245
++ ++ HS +T G ++T+G G+ G+LGH +S Q + P V +G
Sbjct: 241 DNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGH-----NSTQNE-LRPCLVAELVG 294
Query: 246 SRRVKTIAAAKHHTVL-ATEGGEVFTWGSNREGQLGYTSVDTQ--PTPRRVSSLK-LKII 301
R V IA + HT+ ++ G+VF++GS ++GQLG Q P P +VSS + LK+
Sbjct: 295 YR-VTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLE 353
Query: 302 AVAAANKHTAVVSESGEVFTW 322
+ + + + + + W
Sbjct: 354 SHTSEKELIMIAGGNQSILLW 374
Score = 167 (63.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 55/211 (26%), Positives = 90/211 (42%)
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
RGG G + +G TP+ + G + ++ ++ H ++ + G+ F + +
Sbjct: 68 RGGA-GVQVHQLLAGSGGARTPKCIKLGK-NMKIHSVDQGAEHMLILSSDGKPFEYDNYS 125
Query: 276 EGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTS 335
L + S+ + KII + + H+ +S+ GE+F WG N GQLG G
Sbjct: 126 MKHLRFESILQEK----------KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRK 175
Query: 336 NSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNL--------KKSGSTP 387
S TP++VE L G L ++A + H++ L G +N +S P
Sbjct: 176 -FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP 234
Query: 388 LKFHRKIKLHVVSIAAGMVHSTALTEDGALF 418
V +A G HS LT+DG LF
Sbjct: 235 SLIEGLDNQKVEFVACGGSHSALLTQDGLLF 265
Score = 65 (27.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 401 IAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQLYSMCGRNVVSISAGKYWT 450
+A G HS LT+DG LF + S+ +LR + + G V I+ G++ T
Sbjct: 248 VACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307
Query: 451 AA-VTATGDVYMW-DGK 465
A V+ G V+ + GK
Sbjct: 308 LAYVSDLGKVFSFGSGK 324
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 263 (97.6 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 89/317 (28%), Positives = 146/317 (46%)
Query: 119 QSGASITLEDCKSRTPV-DLLSG-PVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGN 172
Q G S L+ + V +S V +V G +SV EV++ G QLG +
Sbjct: 11 QPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG--H 68
Query: 173 AHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQA 232
P ++ +L I ++ + HS+A++ G++++WG G G+LG + + +
Sbjct: 69 EREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG-----LMTTEE 123
Query: 233 AVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPR 291
+V PR + L + + ++ H + G+ FTWG N GQLG +Q +P+
Sbjct: 124 SVAVPRLIQK-LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182
Query: 292 RVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLK 350
RV SL+ + + VAA H+ +S SG VF WG N GQLG S+ +P V+ L+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKLLR 240
Query: 351 GKDLVGVAAAKYHTIVLG-ADGERVIVARNLKKSGSTPLKFH----RKIKL---HVVSIA 402
+ +V ++ + HT VL + G A + + G + R ++L V IA
Sbjct: 241 AQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA 300
Query: 403 AGMVHSTALTEDGALFY 419
G H+ A L Y
Sbjct: 301 CGRQHTLAFVPSSGLIY 317
Score = 262 (97.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 78/272 (28%), Positives = 132/272 (48%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAH-LQKLPCKVDSLHGFVIKLISAA 196
+LQV ++ +A + F+WG ++ QLG G Q P +V SL G + ++A
Sbjct: 139 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 198
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
HS A++ G V+ WG G+LG D + +P V L +++V I+ +
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE------SPCHVKL-LRAQKVVYISCGE 251
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHT-AVVS 314
HT + T+ G VFT+G+ GQLG+ S++ + PRRV L ++ +A +HT A V
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP 311
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESL----KGKDLVGVAAAKYHTIV-LGA 369
SG ++ +GC GQLG T ++ + P V+ G+ KYH + + +
Sbjct: 312 SSGLIYAFGCGARGQLG--TGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFS 369
Query: 370 DGERVIVARNLKKSGSTPLKFHRKIKLHVVSI 401
G++ V + ++ S + F + H S+
Sbjct: 370 GGDQTFVLCSKYENSSPAVDFRTMNQAHYTSL 401
Score = 260 (96.6 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 69/223 (30%), Positives = 112/223 (50%)
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WGY LG P + Q V P+ V + R VK +A H+V E GEV+T
Sbjct: 4 WGYWS---LGQPGISTNL-QGIVAEPQ-VCGFISDRSVKEVACGGDHSVFLLEDGEVYTC 58
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
G N +GQLG+ +P ++ +L + I+ VA H+ +S+ G++F+WG +GQL
Sbjct: 59 GLNTKGQLGHEREGNKP--EQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQL 116
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN------LKK-- 382
G T+ S PR+++ L + ++ V+ +H + L ADG+ +N L K
Sbjct: 117 GLMTTEE-SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF 175
Query: 383 -SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD 424
S ++P + + + +AAG HS AL+ GA+F W ++
Sbjct: 176 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Score = 175 (66.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 49/149 (32%), Positives = 69/149 (46%)
Query: 138 LSG-PVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
L G P+ QV G +S A VF WG QLG + ++ PC V L +
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVY 246
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
IS + H+ +T G V+T+G G G+LGH + + PRRV +GS V I
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE------VNPRRVLELMGSE-VTQI 299
Query: 253 AAAKHHTV-LATEGGEVFTWGSNREGQLG 280
A + HT+ G ++ +G GQLG
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 263 (97.6 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 70/223 (31%), Positives = 113/223 (50%)
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WGY LG P + Q V P+ V + R VK +A +H+V E GEV+T
Sbjct: 4 WGYWS---LGQPGISTNL-QGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTC 58
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
G N +GQLG+ +P ++ +L + II VA H+ +S+ G++F+WG +GQL
Sbjct: 59 GLNTKGQLGHEREGNKP--EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 116
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN------LKK-- 382
G T+ S PR+++ L + ++ V+ +H + L ADG+ +N L K
Sbjct: 117 GLMTTED-SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF 175
Query: 383 -SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD 424
S ++P + + + +AAG HS AL+ GA+F W ++
Sbjct: 176 PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Score = 260 (96.6 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 89/317 (28%), Positives = 146/317 (46%)
Query: 119 QSGASITLEDCKSRTPV-DLLSG-PVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGN 172
Q G S L+ + V +S V +V G +SV EV++ G QLG +
Sbjct: 11 QPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG--H 68
Query: 173 AHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQA 232
P ++ +L I ++ + HS+A++ G++++WG G G+LG + + +
Sbjct: 69 EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG-----LMTTED 123
Query: 233 AVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPR 291
+V PR + L + + ++ H + G+ FTWG N GQLG +Q +P+
Sbjct: 124 SVAVPRLIQK-LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ 182
Query: 292 RVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLK 350
RV SL+ + + VAA H+ +S SG VF WG N GQLG S+ +P V+ L+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKLLR 240
Query: 351 GKDLVGVAAAKYHTIVLG-ADGERVIVARNLKKSGSTPLKFH----RKIKL---HVVSIA 402
+ +V ++ + HT VL + G A + + G + R ++L V IA
Sbjct: 241 TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA 300
Query: 403 AGMVHSTALTEDGALFY 419
G H+ A L Y
Sbjct: 301 CGRQHTLAFVPSSGLIY 317
Score = 256 (95.2 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 78/272 (28%), Positives = 131/272 (48%)
Query: 142 VLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAH-LQKLPCKVDSLHGFVIKLISAA 196
+LQV ++ +A + F+WG ++ QLG G Q P +V SL G + ++A
Sbjct: 139 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 198
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
HS A++ G V+ WG G+LG D +P V L +++V I+ +
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE------SPCHVKL-LRTQKVVYISCGE 251
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHT-AVVS 314
HT + T+ G VFT+G+ GQLG+ S++ + PRRV L ++ +A +HT A V
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP 311
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESL----KGKDLVGVAAAKYHTIV-LGA 369
SG ++ +GC GQLG T ++ + P V+ G+ KYH + + +
Sbjct: 312 SSGLIYAFGCGARGQLG--TGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFS 369
Query: 370 DGERVIVARNLKKSGSTPLKFHRKIKLHVVSI 401
G++ V + ++ S + F + H S+
Sbjct: 370 GGDQTFVLCSKYENYSPAVDFRTMNQAHYTSL 401
Score = 172 (65.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 49/149 (32%), Positives = 69/149 (46%)
Query: 138 LSG-PVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
L G P+ QV G +S A VF WG QLG + ++ PC V L +
Sbjct: 187 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
IS + H+ +T G V+T+G G G+LGH + + PRRV +GS V I
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE------VNPRRVLELMGSE-VTQI 299
Query: 253 AAAKHHTV-LATEGGEVFTWGSNREGQLG 280
A + HT+ G ++ +G GQLG
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 200 (75.5 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 65/210 (30%), Positives = 99/210 (47%)
Query: 130 KSRTPV-DLLSGPVLQVVGSGYNSVATE---VFSWGSGANYQLGTGNAHLQ-KLPCKVDS 184
K R+P D + P + V + S TE V + G G QLG G + L+ K P V
Sbjct: 8 KRRSPPEDAI--PKSKKVKVSHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPL 65
Query: 185 LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
L V A H+V + G+VY++G G LG D + + + P +V
Sbjct: 66 LQDVV--QAEAGGMHTVCLNQSGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVEL-- 117
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE--GQLGYTS-VDTQPTPRRVSSLKLKII 301
+V ++A HT TE G VF WGS R+ G +G + P +V L + ++
Sbjct: 118 -QEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDMPVV 175
Query: 302 AVAAANKHTAVVSESGEVFTWGCNREGQLG 331
VA+ N H +++ G+++T GC +GQLG
Sbjct: 176 KVASGNDHLVMLTTDGDLYTLGCGEQGQLG 205
Score = 182 (69.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 59/172 (34%), Positives = 84/172 (48%)
Query: 258 HTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
H TE G V T G GQLG SV + P V L+ ++ A HT +++S
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ-DVVQAEAGGMHTVCLNQS 85
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIV 376
G+V+++GCN EG LG TS S P VE L+ K +V V+A HT L DG RV +
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEK-VVQVSAGDSHTAALTEDG-RVFL 142
Query: 377 ARNLKKSGST-----PLK-----FHRKIKLHVVSIAAGMVHSTALTEDGALF 418
+ + + P+K ++ + VV +A+G H LT DG L+
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLY 194
Score = 160 (61.4 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 130 KSRTPVDL-LSGPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGT---------GNAHL 175
KS PV + L PV++V G+ + + T ++++ G G QLG G L
Sbjct: 161 KSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGL 220
Query: 176 QKL--P-CKVDSLHGFV--IKLISA--AKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIH 228
++L P C + G ++ A + + A++ G VY +G +LG P
Sbjct: 221 ERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTP----- 275
Query: 229 SGQAAVITPRRVTSGLGSRRVKT-IAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDT 286
G A+ P+ +TS S + + +HHT+ G+ ++ G G+LG +
Sbjct: 276 -GTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEE 334
Query: 287 QPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVV 346
+ P +S L + + +VA VS+ G VF WG QLG G A +
Sbjct: 335 KSIPTLISRLPV-VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG 393
Query: 347 ESLKGKDLVGVAAAKYHTIVLGADGER 373
+ L+ + ++ V++ HT++L D E+
Sbjct: 394 KQLENRVVLTVSSGGQHTVLLVKDKEQ 420
Score = 121 (47.7 bits), Expect = 0.00074, P = 0.00074
Identities = 39/122 (31%), Positives = 56/122 (45%)
Query: 309 HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLG 368
H + +E G V T G GQLG G S P +V L+ D+V A HT+ L
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGES-VLERKKPALVPLLQ--DVVQAEAGGMHTVCLN 83
Query: 369 ADGE--------RVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW 420
G+ + R+ GS + +++ VV ++AG H+ ALTEDG +F W
Sbjct: 84 QSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLW 143
Query: 421 AS 422
S
Sbjct: 144 GS 145
Score = 104 (41.7 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 35/120 (29%), Positives = 59/120 (49%)
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKG--KDLVGVAAAKYHTIVL 367
T +S G V+ +G + QLG T +AS + P+ + S K K VG + ++HTI +
Sbjct: 252 TFAISREGHVYGFGLSNYHQLG--TPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICM 309
Query: 368 GADGERVIVAR-NLKKSGSTPLKFHRKI-----KLHVVS-IAAGMVHSTALTEDGALFYW 420
++G+ + R + G + I +L VVS +A G A+++DG +F W
Sbjct: 310 DSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAW 369
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 261 (96.9 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 76/255 (29%), Positives = 131/255 (51%)
Query: 134 PVDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
P+ +++ PV + ++V ++ WG+ G+ N + P ++S F ++ I
Sbjct: 244 PLSIITQPVTR------SNVLKDIMIWGAITGLIDGSKNQNDALSPKLLESATMFDVQSI 297
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLG-HPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
S H+ VT GEV+ WG G G+LG + DI P+RV S L V+++
Sbjct: 298 SLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDH-------PKRVES-LEDVAVRSV 349
Query: 253 AAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL---KLKIIAVAAANKH 309
A + H T TE GE++ WG + G + + +Q R++S + L +++VA H
Sbjct: 350 ACSDHQTCAVTESGELYLWGIDG-GTIEQSG--SQFLTRKISDVLGGSLTVLSVACGAWH 406
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT--IVL 367
TA+V+ SG++FT+G G LG+G+ S + P+ VESL+ ++ V+ +HT IV
Sbjct: 407 TAIVTSSGQLFTYGSGTFGVLGHGSLESVTK--PKEVESLRRMKVISVSCGPWHTAAIVE 464
Query: 368 GADGERVIVARNLKK 382
A+ + A++ K
Sbjct: 465 TANDRKFYNAKSCGK 479
Score = 254 (94.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 72/231 (31%), Positives = 119/231 (51%)
Query: 156 EVFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
EVF WG+G + +LG N + P +V+SL ++ ++ + + AVT GE+Y WG
Sbjct: 312 EVFCWGNGNSGKLGLKVNIDIDH-PKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGI 370
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLG-SRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GG + SG + +T R+++ LG S V ++A HT + T G++FT+GS
Sbjct: 371 D-GGTIEQ------SG-SQFLT-RKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGS 421
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSES------------GEVF 320
G LG+ S+++ P+ V SL+ +K+I+V+ HTA + E+ G++F
Sbjct: 422 GTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLF 481
Query: 321 TWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
TWG +G+LG+ ++S P V L D + V+ T+ L G
Sbjct: 482 TWGDGDKGRLGH--ADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISG 530
Score = 209 (78.6 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 71/239 (29%), Positives = 113/239 (47%)
Query: 136 DLLSGP--VLQVV-GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFV 189
D+L G VL V G+ + ++ T ++F++GSG LG G+ P +V+SL
Sbjct: 389 DVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMK 448
Query: 190 IKLISAAKFHSVAVT------------SLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITP 237
+ +S +H+ A+ S G+++TWG G GRLGH D + P
Sbjct: 449 VISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHAD------SKRKLVP 502
Query: 238 RRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK 297
VT + +K ++ TV + G V+T GS+ GQLG + + +L
Sbjct: 503 TCVTELIDHDFIK-VSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLT 561
Query: 298 LKIIA-VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV 355
+ + +A+ + H AV++ G V+TWG GQLG G ++ P +VE L G LV
Sbjct: 562 RQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNS--PVLVEPL-GDRLV 617
Score = 166 (63.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 54/174 (31%), Positives = 84/174 (48%)
Query: 150 YNSVAT-EVFSWGSGANYQLGTGNAHLQKLPCKVDSL--HGFVIKLISAAKFHSVAVTSL 206
YN+ + ++F+WG G +LG ++ + +P V L H F IK +S +VA++
Sbjct: 472 YNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDF-IK-VSCGWTLTVALSIS 529
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G VYT G G+LG P +A + V L + VK IA+ HH + T G
Sbjct: 530 GTVYTMGSSIHGQLGCP-------RAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFG 582
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKII-AVAAANKHTAVVSESGEV 319
V+TWG GQLG V + +P V L +++ ++A TA + E+
Sbjct: 583 NVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEI 636
Score = 158 (60.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 57/213 (26%), Positives = 101/213 (47%)
Query: 267 EVFTWGSNREGQL-GYTSVDTQPTPRRVSSLKL-KIIAVAAANKHTAVVSESGEVFTWGC 324
++ WG+ G + G + + +P+ + S + + +++ KH A+V+ GEVF WG
Sbjct: 260 DIMIWGAIT-GLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGN 318
Query: 325 NREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV---IVARNLK 381
G+LG + + P+ VESL+ + VA + + T + GE I ++
Sbjct: 319 GNSGKLGLKVNIDIDH--PKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIE 376
Query: 382 KSGSTPLKFHRKIK------LHVVSIAAGMVHSTALTEDGALFYWASS----------DP 425
+SGS L RKI L V+S+A G H+ +T G LF + S +
Sbjct: 377 QSGSQFLT--RKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLES 434
Query: 426 DLRCQQLYSMCGRNVVSISAGKYWTAAVTATGD 458
+ +++ S+ V+S+S G + TAA+ T +
Sbjct: 435 VTKPKEVESLRRMKVISVSCGPWHTAAIVETAN 467
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 250 (93.1 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 77/239 (32%), Positives = 122/239 (51%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
HSVAVTS GEVYT+GY G+LGH H+ A I P R G+ R+ AA
Sbjct: 154 HSVAVTSKGEVYTFGYNNSGQLGHG----HTEDEARIQPVRSLQGV---RIIQAAAGAAR 206
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQP--TPRRVSSLK-LKIIAVAAANKHTAVVSE 315
T+L ++ G+V+ G G+ Y T+P TP+ V+SLK + ++ A N TAV+S
Sbjct: 207 TMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSR 266
Query: 316 SGEVFTWGCNREGQLGYGTSNSASNYTPR-VVESLKGKDLVGVAAAKYHTIVLGA--DGE 372
G+V+T+ +G+LG+ T A++ PR ++ L+ +V +AA + + L +G
Sbjct: 267 EGKVYTFSWGNDGRLGHQTE--AADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGM 324
Query: 373 RVI-----VARNLKKSGSTPLKFHRKIK-LHVVS-----IAAGMVHSTALTEDGALFYW 420
V + L T K+ R I+ +++ +AAG H+ + +DG + W
Sbjct: 325 SVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTW 383
Score = 217 (81.4 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 67/200 (33%), Positives = 95/200 (47%)
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P V SL + + + + ++ G+VYT+ +G GRLGH +AA + PR
Sbjct: 240 PQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQT------EAADVEPR 293
Query: 239 RVTSGLGSRRVKTIAAAKHHTV-LATE--GGEVFTWGSNREGQLGYTSVDTQPTPRRVSS 295
+ L + V IAA + + LA + G V++ G G+LG+ S + PR +
Sbjct: 294 PLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQ 353
Query: 296 ---LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGK 352
L L+ VAA H AVV + G V TWG R G LG+G S P+VVE L
Sbjct: 354 FQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVEGLSHV 411
Query: 353 DLVGVAAAKYHTIVLGADGE 372
V VA Y T V+ DG+
Sbjct: 412 KAVHVATGDYTTFVVSDDGD 431
Score = 189 (71.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 67/237 (28%), Positives = 114/237 (48%)
Query: 145 VVGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSV 201
V G G++ T EV+++G + QLG G+ + V SL G I +A ++
Sbjct: 149 VAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTM 208
Query: 202 AVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
++ G+VY G G ++ G V TP+ VTS L + V A + T +
Sbjct: 209 LISDDGKVYACGKES---FGEAEYG-GQGTKPVTTPQLVTS-LKNIFVVQAAIGNYFTAV 263
Query: 262 ATEGGEVFTWGSNREGQLGYTS--VDTQPTPRRVSSLKLKIIAVAAANKHTAVVS--ESG 317
+ G+V+T+ +G+LG+ + D +P P + ++ +AA + ++ +G
Sbjct: 264 LSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNG 323
Query: 318 -EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG--VAAAKYHTIVLGADG 371
V++ GC G+LG+G S + Y PRV+E + +L VAA +H V+G DG
Sbjct: 324 MSVYSVGCGLGGKLGHG-SRTDEKY-PRVIEQFQILNLQPRVVAAGAWHAAVVGQDG 378
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 55/193 (28%), Positives = 96/193 (49%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVI--KLISAAKFHSVAVTSLGEVYTWGY 214
V+S G G +LG G+ +K P ++ + ++++A +H+ V G V TWG+
Sbjct: 326 VYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGW 385
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
GR G LGH + + S P+ V GL + +A + T + ++ G+V+++G
Sbjct: 386 GRYGCLGHGNEECES------VPK-VVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCG 438
Query: 275 REGQLGY-TSVDTQP-------TPRRVSSLKL---KIIAVAAANK-----HTAVVSESGE 318
LG+ S D Q +P V+SLK +++ ++ N HT ++ESG+
Sbjct: 439 ESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGK 498
Query: 319 VFTWGCNREGQLG 331
+F +G +GQLG
Sbjct: 499 LFAFGAGDQGQLG 511
Score = 182 (69.1 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 46/128 (35%), Positives = 69/128 (53%)
Query: 247 RRVKTIAAA-KHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVA 304
RR K+ A A H+V T GEV+T+G N GQLG+ + + + V SL+ ++II A
Sbjct: 142 RREKSQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAA 201
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
A T ++S+ G+V+ G G+ YG + TP++V SLK +V A Y T
Sbjct: 202 AGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFT 261
Query: 365 IVLGADGE 372
VL +G+
Sbjct: 262 AVLSREGK 269
Score = 181 (68.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 60/203 (29%), Positives = 95/203 (46%)
Query: 158 FSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL--G-EVYTWGY 214
FSWG+ T A ++ P + L + I+A + +A+ G VY+ G
Sbjct: 273 FSWGNDGRLGHQTEAADVEPRPL-LGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGC 331
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G GG+LGH VI ++ + + + +AA H + + G V TWG
Sbjct: 332 GLGGKLGHGS-RTDEKYPRVIEQFQILN----LQPRVVAAGAWHAAVVGQDGRVCTWGWG 386
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
R G LG+ + + + P+ V L +K + VA + T VVS+ G+V+++GC LG+
Sbjct: 387 RYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHH 446
Query: 334 TS-----NSASNY-TPRVVESLK 350
S N +N +P VV SLK
Sbjct: 447 PSFDEQGNRHANVLSPTVVTSLK 469
Score = 53 (23.7 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 401 IAAGMVHSTALTEDGALFYWA------SSDPDLRCQQLYSMC-GRN---VVSISAGKYWT 450
+AAG H+ + +DG + W + C+ + + G + V ++ G Y T
Sbjct: 364 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTT 423
Query: 451 AAVTATGDVY 460
V+ GDVY
Sbjct: 424 FVVSDDGDVY 433
Score = 49 (22.3 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 392 RKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRN 439
R +++ + + H+ ALTE G LF + + D QL + G+N
Sbjct: 474 RMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQG----QLGTELGKN 517
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 243 (90.6 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 75/233 (32%), Positives = 108/233 (46%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFV-IKLISAAKFHSVAVTSLGEVYTWGY 214
E+F+WG + +LG G P V+SL + ++ +FH+ AVT GE+YTWG
Sbjct: 301 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGD 360
Query: 215 GRG--GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG 272
G G LGH DI P+R+ L V +++ HT L T G +FT+G
Sbjct: 361 GTHNVGLLGHGS-DISHW-----IPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFG 414
Query: 273 SNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSE------------SGEV 319
G LG+ +T PR V SL L+ IAV+ HTA V E SG++
Sbjct: 415 DGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKL 474
Query: 320 FTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
FTWG + +LG+G + P V +L + +A T+ L G+
Sbjct: 475 FTWGDGDKNRLGHGDKDP--RLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQ 525
Score = 238 (88.8 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 62/170 (36%), Positives = 92/170 (54%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H+ VT GE++TWG GGRLGH G+ V PR V S + V +A + H
Sbjct: 292 HAAFVTRQGEIFTWGEESGGRLGHG-----IGKD-VFHPRLVESLTATSSVDFVACGEFH 345
Query: 259 TVLATEGGEVFTWG--SNREGQLGYTSVDTQPTPRRVS-SLK-LKIIAVAAANKHTAVVS 314
T T GE++TWG ++ G LG+ S + P+R++ SL+ L + +V+ HTA+++
Sbjct: 346 TCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALIT 405
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
G +FT+G G LG+G + Y PR VESL G + V+ +HT
Sbjct: 406 SYGRLFTFGDGTFGVLGHGDKETVQ-Y-PREVESLSGLRTIAVSCGVWHT 453
Score = 204 (76.9 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 81/302 (26%), Positives = 127/302 (42%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL---------- 206
+F++G G LG G+ + P +V+SL G +S +H+ AV +
Sbjct: 410 LFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSV 469
Query: 207 --GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATE 264
G+++TWG G RLGH D D + P V + L IA TV T
Sbjct: 470 SSGKLFTWGDGDKNRLGHGDKDPR------LKPTCVPA-LIDYNFHKIACGHSLTVGLTT 522
Query: 265 GGEVFTWGSNREGQLGYTSVDTQPTPRRVSS-LKLKIIA-VAAANKHTAVVSESGEVFTW 322
G+VFT GS GQLG D + P V L + + ++ H A ++ EV+TW
Sbjct: 523 SGQVFTMGSTVYGQLGNLQTDGK-LPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTW 581
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKK 382
G G+LG+G P +VE+LK + + +A +T + + + +
Sbjct: 582 GKGANGRLGHGDLEDRK--VPTIVEALKDRHVKYIACGSNYTAAICL--HKWVSGAEQSQ 637
Query: 383 SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNVVS 442
+ L F K H G+VH + + A + A+ P +LY +C V
Sbjct: 638 CSTCRLAFGFTRKRHNC-YNCGLVHCHSCSSKKA--FRAALAPS--AGRLYRVCDSCYVK 692
Query: 443 IS 444
+S
Sbjct: 693 LS 694
Score = 203 (76.5 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 80/304 (26%), Positives = 131/304 (43%)
Query: 152 SVATEVFSWGSGANYQ--LGTGNAHLQKLPCKV-DSLHGFVIKLISAAKFHSVAVTSLGE 208
++A E+++WG G + LG G+ +P ++ SL G + +S +H+ +TS G
Sbjct: 350 TLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGR 409
Query: 209 VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHT-----VLAT 263
++T+G G G LGH D + V PR V S G R + ++ HT ++ T
Sbjct: 410 LFTFGDGTFGVLGHGD------KETVQYPREVESLSGLRTI-AVSCGVWHTAAVVEIIVT 462
Query: 264 EG-------GEVFTWGSNREGQLGYTSVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVSE 315
+ G++FTWG + +LG+ D + P V +L +A + T ++
Sbjct: 463 QSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTT 522
Query: 316 SGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG-VAAAKYHTIVLGADGERV 374
SG+VFT G GQLG + P +VE + V ++ YH L + E
Sbjct: 523 SGQVFTMGSTVYGQLG---NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVY 579
Query: 375 IVARNLK-KSGSTPLKFHRKIKL--------HVVSIAAGMVHSTALTEDGALFYWASSDP 425
+ + G L+ RK+ HV IA G ++ A+ L W S
Sbjct: 580 TWGKGANGRLGHGDLE-DRKVPTIVEALKDRHVKYIACGSNYTAAI----CLHKWVSGAE 634
Query: 426 DLRC 429
+C
Sbjct: 635 QSQC 638
Score = 173 (66.0 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 49/171 (28%), Positives = 85/171 (49%)
Query: 145 VVGSGYNSVAT-EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
V S +SV++ ++F+WG G +LG G+ + P V +L + I+ +V +
Sbjct: 461 VTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGL 520
Query: 204 TSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLAT 263
T+ G+V+T G G+LG+ D G+ P V L S V+ I+ +H T
Sbjct: 521 TTSGQVFTMGSTVYGQLGNLQTD---GKL----PCLVEDKLASEFVEEISCGAYHVAALT 573
Query: 264 EGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVV 313
EV+TWG G+LG+ ++ + P V +LK + + +A + +TA +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 147 (56.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 59/208 (28%), Positives = 92/208 (44%)
Query: 239 RVTSGLGSR-RVKTIAAAKHHTVLATEG---GEVFTWGS---NREGQLG------YTSVD 285
+V+ G R V + ++ H A + G+V+ WG + ++G Y +
Sbjct: 207 KVSGSDGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTR 266
Query: 286 TQ---PTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYT 342
T P P S++ L + +A +H A V+ GE+FTWG G+LG+G +
Sbjct: 267 TDVLVPKPLE-SNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDV--FH 323
Query: 343 PRVVESLKGKDLVG-VAAAKYHTIVLGADGERVIVA---RN--LKKSGST-----PLKFH 391
PR+VESL V VA ++HT + GE N L GS P +
Sbjct: 324 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383
Query: 392 RKIK-LHVVSIAAGMVHSTALTEDGALF 418
++ LHV S++ G H+ +T G LF
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYGRLF 411
Score = 68 (29.0 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 390 FHRKIKLHVVSIA---AGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAG 446
FH+ H +++ +G V + T G L +D L C + V IS G
Sbjct: 507 FHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGN-LQTDGKLPCLVEDKLASEFVEEISCG 565
Query: 447 KYWTAAVTATGDVYMWDGK 465
Y AA+T+ +VY W GK
Sbjct: 566 AYHVAALTSRNEVYTW-GK 583
Score = 56 (24.8 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 9 HGQKQTLQSPARKSSLGGVQKDLCLAVREG---SLADVESALALLKKNGGNINSRNIF 63
HG K+T+Q P SL G++ +AV G + A VE + + + N +++S +F
Sbjct: 423 HGDKETVQYPREVESLSGLRT---IAVSCGVWHTAAVVE--IIVTQSNSSSVSSGKLF 475
Score = 50 (22.7 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 694 NQEISKQVRALRKKLQQIEMLEVKLSNGHILDEQQIAKLQTKSVLERSLAE 744
NQEI K + Q+ E EV+L N ++ +A + +S R+ E
Sbjct: 839 NQEIVKLRTQVDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKE 889
Score = 44 (20.5 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASSD----------PDLRCQQLYSMCGRNVVSISAGK 447
VV I +S++++ G LF W D P L+ + ++ N I+ G
Sbjct: 456 VVEIIVTQSNSSSVSS-GKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGH 514
Query: 448 YWTAAVTATGDVY 460
T +T +G V+
Sbjct: 515 SLTVGLTTSGQVF 527
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 272 (100.8 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 96/317 (30%), Positives = 149/317 (47%)
Query: 121 GASITLEDCKSRTPVDL--LSGPVLQVVGSG--YNSVATE---VFSWGSGANYQ-----L 168
G +T +D TP L + P + + SG Y+SV TE V+ WG GA L
Sbjct: 727 GFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPIL 786
Query: 169 GTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIH 228
G Q LP K++SL V +S H AV + GE+ TWG G G+LGH D +
Sbjct: 787 GIPQIEDQLLPFKLESLSDVVS--VSIGFCHGAAVRANGELLTWGVGENGQLGHGDTN-- 842
Query: 229 SGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQP 288
Q I P+ + S L S + + + HT+ T+ G+V++WG++ GQLG V
Sbjct: 843 -NQ---IEPKIIQS-LTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHS 897
Query: 289 TPRRVSSL-KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE 347
+P +VS+L K ++ +A+ + H AV++ S EV +G G G ++ S P +V
Sbjct: 898 SPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFG---NGA-AMGAASVVS--LPTLVP 951
Query: 348 SLKGKDLVGVAAAKYHTIVLGADGERVI--VARNLKKSGS---TPLKFHRKIKLHVV-SI 401
SLK + + Y T + G+ + L G+ T K ++ + I
Sbjct: 952 SLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGGNSTETSPKLIEALRNQSIRQI 1011
Query: 402 AAGMVHSTALTEDGALF 418
+ G H+ LT+ G +F
Sbjct: 1012 SCGGRHTAFLTDSGRIF 1028
Score = 268 (99.4 bits), Expect = 9.8e-18, Sum P(2) = 9.8e-18
Identities = 97/363 (26%), Positives = 164/363 (45%)
Query: 157 VFSWGSGANYQLG---TGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
+ +WGS +N +LG T Q P ++ + + I IS+ ++S +T G+VY WG
Sbjct: 715 LMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTENGDVYLWG 774
Query: 214 YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
G P I + ++ P ++ S L V +++ H GE+ TWG
Sbjct: 775 RGAVKTPAVPILGIPQIEDQLL-PFKLES-LSD--VVSVSIGFCHGAAVRANGELLTWGV 830
Query: 274 NREGQLGYTSVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
GQLG+ + Q P+ + SL I V KHT ++++G+V++WG + GQLG
Sbjct: 831 GENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGL 890
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSG-----STP 387
G S+ P V +L+ +++ +A+ H VL E V+V N G S P
Sbjct: 891 GDVTQHSS--PMQVSALEKYNVLQIASGSTHCAVLTTSKE-VLVFGNGAAMGAASVVSLP 947
Query: 388 LKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWAS--------SDPDLRCQQLYSMCGRN 439
LH+ + G + A+TE G ++ W + + + + + ++ ++
Sbjct: 948 TLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGGNSTETSPKLIEALRNQS 1007
Query: 440 VVSISAGKYWTAAVTATGDVYMWD-------GKKSKD-NPPLVTRLHGIKKAT--SVSVG 489
+ IS G TA +T +G ++ G+ S D N P R+ + K T SVS G
Sbjct: 1008 IRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNKP--KRIESLTKTTFISVSCG 1065
Query: 490 ETH 492
E +
Sbjct: 1066 ENY 1068
Score = 264 (98.0 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 80/264 (30%), Positives = 129/264 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
E+ +WG G N QLG G+ + Q P + SL F I + + H++ +T G+VY+WG
Sbjct: 824 ELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGAS 883
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
G+LG D HS +P +V S L V IA+ H + T EV +G+
Sbjct: 884 EYGQLGLGDVTQHS------SPMQV-SALEKYNVLQIASGSTHCAVLTTSKEVLVFGNG- 935
Query: 276 EGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGT 334
+G SV + PT V SLK L I + + TA ++E G+V+TWG +E LG+G
Sbjct: 936 -AAMGAASVVSLPT--LVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE--LGHG- 989
Query: 335 SNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNL-----KKSG--STP 387
NS +P+++E+L+ + + ++ HT L G ++ + SG + P
Sbjct: 990 GNSTET-SPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNKP 1048
Query: 388 LKFHRKIKLHVVSIAAGMVHSTAL 411
+ K +S++ G ++ AL
Sbjct: 1049 KRIESLTKTTFISVSCGENYNVAL 1072
Score = 228 (85.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 81/282 (28%), Positives = 129/282 (45%)
Query: 204 TSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLAT 263
TS G + TWG +LG F + + + TP R+ + + +I++ +++ + T
Sbjct: 711 TSRG-LMTWGSASNCKLG---FKVTAKDQSQPTPERLPN-FNIPDICSISSGSYYSSVLT 765
Query: 264 EGGEVFTWGSNREGQ-----LGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGE 318
E G+V+ WG LG ++ Q P ++ SL +++V+ H A V +GE
Sbjct: 766 ENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLS-DVVSVSIGFCHGAAVRANGE 824
Query: 319 VFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIV-A 377
+ TWG GQLG+G +N+ P++++SL + V + HTI L +G+ A
Sbjct: 825 LLTWGVGENGQLGHGDTNN--QIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGA 882
Query: 378 RNLKKSG-------STPLKFHRKIKLHVVSIAAGMVHSTALTE--------DGALFYWAS 422
+ G S+P++ K +V+ IA+G H LT +GA AS
Sbjct: 883 SEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGAAMGAAS 942
Query: 423 --SDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
S P L Y R + G Y TAA+T GDVY W
Sbjct: 943 VVSLPTLVPSLKYLHIDR----LCCGHYSTAAITECGDVYTW 980
Score = 196 (74.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 58/184 (31%), Positives = 91/184 (49%)
Query: 142 VLQVV-GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAK 197
VLQ+ GS + +V T EV +G+GA G A + LP V SL I +
Sbjct: 910 VLQIASGSTHCAVLTTSKEVLVFGNGA----AMGAASVVSLPTLVPSLKYLHIDRLCCGH 965
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
+ + A+T G+VYTWG G+ LGH G + +P+ + + L ++ ++ I+
Sbjct: 966 YSTAAITECGDVYTWGTGQ--ELGH------GGNSTETSPKLIEA-LRNQSIRQISCGGR 1016
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVSES 316
HT T+ G +FT G + GQLG S D Q P+R+ SL K I+V+ + + ++
Sbjct: 1017 HTAFLTDSGRIFTCGKDSFGQLGQMSGD-QNKPKRIESLTKTTFISVSCGENYNVALFDT 1075
Query: 317 GEVF 320
F
Sbjct: 1076 TRSF 1079
Score = 47 (21.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 31/119 (26%), Positives = 48/119 (40%)
Query: 926 QPTRN---KDQFEDPSFGRSEGKVLLSSFMTS-KPIPVVSARAQQATDGDKSTPPW---- 977
Q +RN K FE + ++ K + +TS K P++ ++Q + PP
Sbjct: 1537 QQSRNTWAKSIFETVTTTFTQEKGAPTPSLTSIKSTPII--QSQSSASSTLQIPPSDIAA 1594
Query: 978 AASGTPPSLSRP--------SLRNIQMQQGKQHCLSHSPKTR---TAGFSIAPSQGSPS 1025
A S TP S P S+ N M LS +PK + +I ++ SPS
Sbjct: 1595 APSSTPSSAPSPLVLATQLNSVNNTDMSANSSTPLSSTPKEQHPFALSENIEKTESSPS 1653
Score = 42 (19.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 32/138 (23%), Positives = 49/138 (35%)
Query: 875 SGALDDTPKEIALPPPPTPRSEGPAWGGAKVPKGSAS-LREIQSEQSKIKVNQPTRNKDQ 933
S L P +IA P TP S P+ P A+ L + + + P + +
Sbjct: 1582 SSTLQIPPSDIAAAPSSTP-SSAPS------PLVLATQLNSVNNTDMSANSSTPLSSTPK 1634
Query: 934 FEDPSFGRSEG-KVLLSSFMTSKPIPVVSARAQQATDGDKSTPPWAAS--GTPPSLSRPS 990
+ P F SE + SS T P ++A T +T A+ SL P
Sbjct: 1635 EQHP-FALSENIEKTESSPSTKLQQPTINATTTNTTTSPVATTTATATTNNNTASLLDPH 1693
Query: 991 LRNIQMQQGKQHCLSHSP 1008
+++Q L P
Sbjct: 1694 QIMTELEQSDWTFLMDPP 1711
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 201 (75.8 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 61/208 (29%), Positives = 99/208 (47%)
Query: 130 KSRTPVD--LLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQ-KLPCKVDSLH 186
K R+P + + ++V +N+ V + G G QLG G + L+ K P V L
Sbjct: 8 KRRSPPEDAIPKSKKVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ 67
Query: 187 GFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGS 246
V A H+V ++ G+VY++G G LG D + + + P +V
Sbjct: 68 DVV--QAEAGGMHTVCLSQSGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVEL---Q 118
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNRE--GQLGYTS-VDTQPTPRRVSSLKLKIIAV 303
+V ++A HT TE G VF WGS R+ G +G + P +V L +++ V
Sbjct: 119 EKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDTQVVKV 177
Query: 304 AAANKHTAVVSESGEVFTWGCNREGQLG 331
A+ N H +++ G+++T GC +GQLG
Sbjct: 178 ASGNDHLVMLTTDGDLYTLGCGEQGQLG 205
Score = 186 (70.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 64/184 (34%), Positives = 93/184 (50%)
Query: 246 SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVA 304
S++VK ++ H+T E G V T G GQLG SV + P V L+ ++
Sbjct: 20 SKKVK-VSHRSHNT----EPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ-DVVQAE 73
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
A HT +S+SG+V+++GCN EG LG TS S P VE L+ K +V V+A HT
Sbjct: 74 AGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEK-VVQVSAGDSHT 131
Query: 365 IVLGADGERVIVARNLKKSGST-----PLKFHR---KIKL--HVVSIAAGMVHSTALTED 414
L DG RV + + + + P+K +++L VV +A+G H LT D
Sbjct: 132 AALTEDG-RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTD 190
Query: 415 GALF 418
G L+
Sbjct: 191 GDLY 194
Score = 157 (60.3 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 45/175 (25%), Positives = 80/175 (45%)
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKT-IAAAK 256
+ + A++ G VY +G +LG P G + P+ +TS S + + +
Sbjct: 250 YFTFAISREGHVYGFGLSNYHQLGTP------GTGSCFIPQNLTSFKNSTKSWVGFSGGQ 303
Query: 257 HHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSE 315
HHTV G+ ++ G G+LG + + P +S L + + +VA VS+
Sbjct: 304 HHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV-VSSVACGASVGYAVSK 362
Query: 316 SGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGAD 370
G VF WG QLG G + A + + L+ ++++ V++ HT++L D
Sbjct: 363 DGRVFAWGMGTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKD 417
Score = 99 (39.9 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 33/120 (27%), Positives = 58/120 (48%)
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKG--KDLVGVAAAKYHTIVL 367
T +S G V+ +G + QLG T + S + P+ + S K K VG + ++HT+ +
Sbjct: 252 TFAISREGHVYGFGLSNYHQLG--TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCM 309
Query: 368 GADGERVIVAR-NLKKSGSTPLKFHRKI-----KLHVVS-IAAGMVHSTALTEDGALFYW 420
++G+ + R + G + I +L VVS +A G A+++DG +F W
Sbjct: 310 DSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAW 369
Score = 40 (19.1 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 428 RCQQLYSMCGRNVVSIS---AGKYWTAAVTATGDVY 460
RC L S R V G Y+T A++ G VY
Sbjct: 227 RCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVY 262
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 200 (75.5 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 61/208 (29%), Positives = 98/208 (47%)
Query: 130 KSRTPVD--LLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQ-KLPCKVDSLH 186
K R+P + + ++V +N+ V + G G QLG G + L+ K P V L
Sbjct: 8 KRRSPPEDAIPKSKKVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ 67
Query: 187 GFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGS 246
V A H+V ++ G+VY++G G LG D + + + P +V
Sbjct: 68 DVV--QAEAGGMHTVCLSQSGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVEL---Q 118
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNRE--GQLGYTS-VDTQPTPRRVSSLKLKIIAV 303
+V ++A HT TE G VF WGS R+ G +G + P +V L ++ V
Sbjct: 119 EKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDAPVVKV 177
Query: 304 AAANKHTAVVSESGEVFTWGCNREGQLG 331
A+ N H +++ G+++T GC +GQLG
Sbjct: 178 ASGNDHLVMLTNDGDLYTLGCGEQGQLG 205
Score = 186 (70.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 64/184 (34%), Positives = 93/184 (50%)
Query: 246 SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVA 304
S++VK ++ H+T E G V T G GQLG SV + P V L+ ++
Sbjct: 20 SKKVK-VSHRSHNT----EPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ-DVVQAE 73
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
A HT +S+SG+V+++GCN EG LG TS S P VE L+ K +V V+A HT
Sbjct: 74 AGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEK-VVQVSAGDSHT 131
Query: 365 IVLGADGERVIVARNLKKSGST-----PLKFHR---KIKLH--VVSIAAGMVHSTALTED 414
L DG RV + + + + P+K +++L VV +A+G H LT D
Sbjct: 132 AALTEDG-RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTND 190
Query: 415 GALF 418
G L+
Sbjct: 191 GDLY 194
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 68/264 (25%), Positives = 113/264 (42%)
Query: 130 KSRTPVDL-LSGPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGT---------GNAHL 175
KS PV + L PV++V G+ + + T ++++ G G QLG G L
Sbjct: 161 KSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGL 220
Query: 176 QKL--P-C---KVDSLHGFV-IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIH 228
+L P C K G V + + + A++ G VY +G +LG P
Sbjct: 221 GRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTP----- 275
Query: 229 SGQAAVITPRRVTSGLGSRRVKT-IAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDT 286
G + P+ +TS S + + +HHTV G+ ++ G G+LG +
Sbjct: 276 -GTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE 334
Query: 287 QPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVV 346
+ P +S L + + +VA VS+ G VF WG QLG G A +
Sbjct: 335 KSIPTLISRLPV-VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG 393
Query: 347 ESLKGKDLVGVAAAKYHTIVLGAD 370
+ L+ + ++ V++ HT++L D
Sbjct: 394 KQLENRVVLTVSSGGQHTVLLVKD 417
Score = 148 (57.2 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 73/285 (25%), Positives = 129/285 (45%)
Query: 119 QSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLG--TGN 172
Q G ++ + K V LL V+Q G ++V +V+S+G LG T
Sbjct: 47 QLGLGESVLERKKPALVPLLQD-VVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSV 105
Query: 173 AHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGR--GGRLGHPDFDIHSG 230
+ +P KV+ L V++ +SA H+ A+T G V+ WG R G +G +
Sbjct: 106 EGSEMVPGKVE-LQEKVVQ-VSAGDSHTAALTEDGRVFLWGSFRDNNGVIG-----LLEP 158
Query: 231 QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYT-SVDTQPT 289
+ P +V L + VK +A+ H V+ T G+++T G +GQLG +
Sbjct: 159 MKKSMVPVQVQ--LDAPVVK-VASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRG 215
Query: 290 PRR-VSSLKL-KIIAVAAANKHTAVVSES---GEVFTWGCNREGQL-GYGTSN------- 336
R+ + L + + + + + V + G FT+ +REG + G+G SN
Sbjct: 216 GRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTP 275
Query: 337 -SASNYTPRVVESLKG--KDLVGVAAAKYHTIVLGADGERVIVAR 378
+ S + P+ + S K K VG + ++HT+ + ++G+ + R
Sbjct: 276 GTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 320
Score = 99 (39.9 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 33/120 (27%), Positives = 58/120 (48%)
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKG--KDLVGVAAAKYHTIVL 367
T +S G V+ +G + QLG T + S + P+ + S K K VG + ++HT+ +
Sbjct: 252 TFAISREGHVYGFGLSNYHQLG--TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCM 309
Query: 368 GADGERVIVAR-NLKKSGSTPLKFHRKI-----KLHVVS-IAAGMVHSTALTEDGALFYW 420
++G+ + R + G + I +L VVS +A G A+++DG +F W
Sbjct: 310 DSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAW 369
Score = 40 (19.1 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 428 RCQQLYSMCGRNVVSIS---AGKYWTAAVTATGDVY 460
RC L S R V G Y+T A++ G VY
Sbjct: 227 RCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVY 262
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 252 (93.8 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 89/309 (28%), Positives = 144/309 (46%)
Query: 84 LAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVL 143
+AAG A SG L A G A LL + SR ++ SG +
Sbjct: 343 VAAGRTQKAGVTRSGRLILWEAPPLG--AGGGTLLPGAVELPQPQFVSRF-LEGQSGVTI 399
Query: 144 QVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF 198
+ V G + + T+ + ++GSG+N LG GN P V++L G+ + ++
Sbjct: 400 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGAS 459
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H +A+++ GE++ WG G GGRLG + H+ P++V G + +
Sbjct: 460 HVLALSTDGELFAWGRGDGGRLGLGTRESHN------CPQQVPVAPGQEAQRVVCGIDSS 513
Query: 259 TVLATEGGEVFTWGSNREGQLG--YTSVDTQPTPRR----------VSSLKLK---IIAV 303
+L T G V GSNR +LG + S+D +P P + + S L ++ V
Sbjct: 514 MIL-TSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCV 572
Query: 304 AAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYH 363
H+A ++ SG+ +T+G N+ GQLG TS+ + P V+ L+G +V VA
Sbjct: 573 DLGTAHSAAITASGDCYTFGSNQHGQLG--TSSRRVSRAPCRVQGLEGIKMVMVACGDAF 630
Query: 364 TIVLGADGE 372
T+ +GA+GE
Sbjct: 631 TVAVGAEGE 639
Score = 198 (74.8 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 64/220 (29%), Positives = 95/220 (43%)
Query: 126 LEDCKSRTPVDLLSGPVLQVVGSGYNSVAT-----EVFSWGSGANYQLGTGNAHLQKLPC 180
L D T V+ L G + V G + V E+F+WG G +LG G P
Sbjct: 434 LTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQ 493
Query: 181 KVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG--HPDFDIHS------GQA 232
+V G + + S+ +TS G V G R +LG H D +A
Sbjct: 494 QVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEA 553
Query: 233 AVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR 292
TP ++ L + + H+ T G+ +T+GSN+ GQLG +S P R
Sbjct: 554 LSFTPLG-SAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCR 612
Query: 293 VSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
V L+ +K++ VA + T V GEV++WG G+LG
Sbjct: 613 VQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLG 652
Score = 155 (59.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 37/108 (34%), Positives = 62/108 (57%)
Query: 126 LEDCKSRTPVD---LLSGPVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKL 178
+E+ S TP+ L P+L V +G+ +++ T + +++GS + QLGT + + +
Sbjct: 550 VEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRA 609
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFD 226
PC+V L G + +++ +VAV + GEVY+WG G GRLG D D
Sbjct: 610 PCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDED 657
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 198 (74.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 64/210 (30%), Positives = 103/210 (49%)
Query: 130 KSRTP-VDLLSGPVLQVVGSGYNSVATE---VFSWGSGANYQLGTG-NAHLQKLPCKVDS 184
K R+P D + P + V + S +TE V + G G QLG G N +K P V S
Sbjct: 8 KRRSPPADAI--PKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV-S 64
Query: 185 LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
+ V++ A H+V ++ G+VY++G G LG D + + + P +V
Sbjct: 65 IPEDVVQA-EAGGMHTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVEL-- 117
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE--GQLGYTS-VDTQPTPRRVSSLKLKII 301
+V ++A HT T+ G VF WGS R+ G +G + P +V L + ++
Sbjct: 118 -QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDVPVV 175
Query: 302 AVAAANKHTAVVSESGEVFTWGCNREGQLG 331
VA+ N H +++ G+++T GC +GQLG
Sbjct: 176 KVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 182 (69.1 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 59/172 (34%), Positives = 85/172 (49%)
Query: 258 HTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
H +TE G V T G GQLG +V + P VS + ++ A HT +S+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSKS 85
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIV 376
G+V+++GCN EG LG TS S P VE L+ K +V V+A HT L DG RV +
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEK-VVQVSAGDSHTAALTDDG-RVFL 142
Query: 377 ARNLKKSGST-----PLK-----FHRKIKLHVVSIAAGMVHSTALTEDGALF 418
+ + + P+K ++ + VV +A+G H LT DG L+
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLY 194
Score = 158 (60.7 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 68/267 (25%), Positives = 116/267 (43%)
Query: 130 KSRTPVDL-LSGPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGT---------GNAHL 175
KS PV + L PV++V G+ + + T ++++ G G QLG G L
Sbjct: 161 KSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGL 220
Query: 176 QKL--P-C---KVDSLHGFV-IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIH 228
++L P C K G V + + + A++ G VY +G +LG P
Sbjct: 221 ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTP----- 275
Query: 229 SGQAAVITPRRVTSGLGSRRVKT-IAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDT 286
G + P+ +TS S + + +HHTV G+ ++ G G+LG +
Sbjct: 276 -GTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE 334
Query: 287 QPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVV 346
+ P +S L + +VA V++ G VF WG QLG G A + +
Sbjct: 335 KSIPTLISRLPA-VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMG 393
Query: 347 ESLKGKDLVGVAAAKYHTIVLGADGER 373
+ L+ + ++ V++ HT++L D E+
Sbjct: 394 KQLENRVVLSVSSGGQHTVLLVKDKEQ 420
Score = 98 (39.6 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKG--KDLVGVAAAKYHTIVL 367
T +S G V+ +G + QLG T + S + P+ + S K K VG + ++HT+ +
Sbjct: 252 TFAISHEGHVYGFGLSNYHQLG--TPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCM 309
Query: 368 GADGERVIVAR-NLKKSGSTPLKFHRKI-----KLHVVS-IAAGMVHSTALTEDGALFYW 420
++G+ + R + G + I +L VS +A G A+T+DG +F W
Sbjct: 310 DSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAW 369
Score = 46 (21.3 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 30/112 (26%), Positives = 45/112 (40%)
Query: 356 GVAAAKYHTIVLGADG-ERVIVARNL---KKSGSTPLKFHRKIKLHVVSI-AAGMVHSTA 410
G + YH LG G E + +NL K S + + F + H V + + G +S
Sbjct: 263 GFGLSNYHQ--LGTPGTESCFIPQNLTSFKNSTKSWVGFSGG-QHHTVCMDSEGKAYSLG 319
Query: 411 LTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
E G L ++ + L S V S++ G AVT G V+ W
Sbjct: 320 RAEYGRLGLGEGAE-EKSIPTLISRLPA-VSSVACGASVGYAVTKDGRVFAW 369
Score = 40 (19.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 428 RCQQLYSMCGRNVVSIS---AGKYWTAAVTATGDVY 460
+C L S R V G Y+T A++ G VY
Sbjct: 227 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY 262
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 265 (98.3 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 75/217 (34%), Positives = 116/217 (53%)
Query: 131 SRTPVDLLSGPVLQVVGSGYNSVAT------EVFSWGSGANYQLGTGNAHLQ-KLPCKVD 183
SR L ++Q+ Y+S+A E+F+WG + QLG G P V+
Sbjct: 126 SRFQCILQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVE 185
Query: 184 SLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSG 243
L G + ISA K HS+A++ G +Y+WG G+LG +G+ P + +
Sbjct: 186 HLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLG---LGHTNGEDF---PSLIEA- 238
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIA 302
L +++V+ +A HT L T+ G VFT+G+ + GQLG+ S + PR V+ L ++
Sbjct: 239 LDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQ 298
Query: 303 VAAANK-HT-AVVSESGEVFTWGCNREGQLGYG-TSN 336
VA ++ HT A VS+ G+VF++G +EGQLG G T N
Sbjct: 299 VACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHN 335
Score = 214 (80.4 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 61/213 (28%), Positives = 107/213 (50%)
Query: 163 GANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL--GEVYTWGYGRGGRL 220
G ++ H + C + +I+ I+ +HS+A++ GE++ WG G+L
Sbjct: 113 GKPFEYNYSIEHASRFQCILQEKS--IIQ-ITCGDYHSLALSKGQGGELFAWGQNLHGQL 169
Query: 221 GHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG 280
G + ++ TP+ V G V+ I+A K H++ + G +++WG N GQLG
Sbjct: 170 G-----VGRLFTSIPTPQLVEHLSGVPLVQ-ISAGKAHSMALSMSGNIYSWGRNDLGQLG 223
Query: 281 YTSVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
+ + P + +L K+ +A HTA++++ G VFT+G + GQLG+ NS
Sbjct: 224 LGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGH---NSTQ 280
Query: 340 N-YTPRVVESLKGKDLVGVAA-AKYHTIVLGAD 370
N PR+V L G + VA +++HT+ +D
Sbjct: 281 NELRPRLVTELAGNRVTQVACGSRWHTLAYVSD 313
Score = 200 (75.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 57/201 (28%), Positives = 106/201 (52%)
Query: 133 TP--VDLLSG-PVLQV-VGSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSL 185
TP V+ LSG P++Q+ G ++ S++ ++SWG QLG G+ + + P +++L
Sbjct: 180 TPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEAL 239
Query: 186 HGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLG 245
++ ++ H+ +T G V+T+G G+ G+LGH +S Q + PR VT G
Sbjct: 240 DNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGH-----NSTQNE-LRPRLVTELAG 293
Query: 246 SRRVKTIAAAKHHTVL-ATEGGEVFTWGSNREGQLGYTSVDTQ--PTPRRV-SSLKLKII 301
+R + ++ HT+ ++ G+VF++GS +EGQLG Q P P ++ S+ +LK
Sbjct: 294 NRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFE 353
Query: 302 AVAAANKHTAVVSESGEVFTW 322
+ + + + + + W
Sbjct: 354 SRTSEKELIMIAGGNQSILLW 374
Score = 192 (72.6 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 43/132 (32%), Positives = 71/132 (53%)
Query: 244 LGSRRVKTIAAAKHHTVLAT--EGGEVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLK-LK 299
L + + I +H++ + +GGE+F WG N GQLG + T PTP+ V L +
Sbjct: 132 LQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVP 191
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAA 359
++ ++A H+ +S SG +++WG N GQLG G +N P ++E+L + + +A
Sbjct: 192 LVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGED--FPSLIEALDNQKVEFLAC 249
Query: 360 AKYHTIVLGADG 371
HT +L DG
Sbjct: 250 GGSHTALLTKDG 261
Score = 138 (53.6 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 44/129 (34%), Positives = 64/129 (49%)
Query: 300 IIAVAAANKHTAVVS--ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGV 357
II + + H+ +S + GE+F WG N GQLG G + S TP++VE L G LV +
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFT-SIPTPQLVEHLSGVPLVQI 195
Query: 358 AAAKYHTIVLGADGERVIVARN-LKKSG---STPLKFHRKIKL----HVVSIAAGMVHST 409
+A K H++ L G RN L + G + F I+ V +A G H+
Sbjct: 196 SAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTA 255
Query: 410 ALTEDGALF 418
LT+DG +F
Sbjct: 256 LLTKDGLVF 264
Score = 63 (27.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 401 IAAGMVHSTALTEDGALFYWA----------SSDPDLRCQQLYSMCGRNVVSISAGKYW- 449
+A G H+ LT+DG +F + S+ +LR + + + G V ++ G W
Sbjct: 247 LACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWH 306
Query: 450 TAA-VTATGDVYMW-DGKKSK 468
T A V+ G V+ + GK+ +
Sbjct: 307 TLAYVSDLGKVFSFGSGKEGQ 327
Score = 38 (18.4 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 329 QLGYGTSNSASNYTPR-VVESLK 350
QL Y T +S +NY + ++E LK
Sbjct: 554 QLHYWTESSENNYHVKALLEILK 576
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 236 (88.1 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 86/313 (27%), Positives = 135/313 (43%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKV-DSLHGFVIKLISAAKFHSVAVTSLGEVY 210
S A +F+WG+ + QLG G+ LP ++ D IK ++ HSV VT G ++
Sbjct: 12 SAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLF 71
Query: 211 TWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
G + G+LG H+ + T + G R+V A T++ TE G+V +
Sbjct: 72 VCGLNKDGQLGLG----HTEEVLRFTICKPLLGCPIRQV---ACGWDFTIMLTEKGQVLS 124
Query: 271 WGSNREGQLGYTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCN--RE 327
GSN GQLG + P+ + L+ K++ VAA +H +++G F WG
Sbjct: 125 CGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQWGTGLASS 184
Query: 328 GQL---GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK--- 381
G+ G + P V L+ +V A H+ L GE + RN
Sbjct: 185 GRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQL 244
Query: 382 KSGSTPLKFHRKIKLH------VVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSM 435
S +T L ++++ H V ++ +G H A TE G +F W +D Y
Sbjct: 245 ASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRAD--------YGQ 296
Query: 436 CGRNVVSISAGKY 448
GR + S A K+
Sbjct: 297 LGRTLGSPEAQKH 309
Score = 212 (79.7 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 71/206 (34%), Positives = 100/206 (48%)
Query: 137 LLSGPVLQVV-GSGYNSVATE---VFSWGSGANYQLGTGNAHLQ-KLPCKVDSLHGFVIK 191
LL P+ QV G + + TE V S GS A QLG + + +P ++ L V+
Sbjct: 98 LLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVV- 156
Query: 192 LISAAKFHSVAVTSLGEVYTWGYG--RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRV 249
++A H++A T G + WG G GR P ++ A P RVT GL S V
Sbjct: 157 CVAAGLRHALATTDTGSTFQWGTGLASSGRRLCPGQNLPLFLTAK-EPSRVT-GLESSTV 214
Query: 250 KTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDT-QPTPRRVSSLKL---KIIAVAA 305
A H+ T+ GE++ WG N+ GQL S+ T P P+RV + K+ AV +
Sbjct: 215 VCAVAGSDHSASLTDTGELYVWGRNKHGQLA--SLATFLPLPQRVEAHYFQDEKVTAVWS 272
Query: 306 ANKHTAVVSESGEVFTWGCNREGQLG 331
H +E+G+VFTWG GQLG
Sbjct: 273 GWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 181 (68.8 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 70/241 (29%), Positives = 111/241 (46%)
Query: 200 SVAVTSLGEVYTWG---YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
S AV++ ++ WG YG+ G LGH + D V+ P++++ S +K++
Sbjct: 8 SEAVSAAAVLFAWGANSYGQLG-LGHKE-D-------VLLPQQLSDFCKSGCIKSVTGGG 58
Query: 257 HHTVLATEGGEVFTWGSNREGQLG--YTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVS 314
H+V+ T+GG +F G N++GQLG +T + T + L I VA T +++
Sbjct: 59 GHSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRFTICK-PLLGCPIRQVACGWDFTIMLT 117
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV-------- 366
E G+V + G N GQLG P+ +E L+ K +V VAA H +
Sbjct: 118 EKGQVLSCGSNAFGQLGV-PHGPRKCVVPQAIECLREK-VVCVAAGLRHALATTDTGSTF 175
Query: 367 -----LGADGERVIVARNLKK--SGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFY 419
L + G R+ +NL + P + VV AG HS +LT+ G L+
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYV 235
Query: 420 W 420
W
Sbjct: 236 W 236
Score = 139 (54.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 54/182 (29%), Positives = 79/182 (43%)
Query: 129 CKSRTPVDLLSGPVLQVVGSGYNSVAT----EVFSWGSG---ANYQLGTG-NAHL---QK 177
C ++ L V+ V +++AT F WG+G + +L G N L K
Sbjct: 142 CVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQWGTGLASSGRRLCPGQNLPLFLTAK 201
Query: 178 LPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITP 237
P +V L + A HS ++T GE+Y WG + G+L S + P
Sbjct: 202 EPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-------SLATFLPLP 254
Query: 238 RRVTSG-LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYT--SVDTQPTPRRVS 294
+RV + +V + + H V TE G+VFTWG GQLG T S + Q + S
Sbjct: 255 QRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRTLGSPEAQKHGEQDS 314
Query: 295 SL 296
SL
Sbjct: 315 SL 316
Score = 59 (25.8 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 22/65 (33%), Positives = 31/65 (47%)
Query: 440 VVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRL--------HGIK--KATSVSVG 489
VV AG +A++T TG++Y+W K L T L H + K T+V G
Sbjct: 214 VVCAVAGSDHSASLTDTGELYVWGRNKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSG 273
Query: 490 ETHLL 494
THL+
Sbjct: 274 WTHLV 278
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 258 (95.9 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 89/334 (26%), Positives = 140/334 (41%)
Query: 147 GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
G+ Y + T +++SWG + +LG G P +D +G ++L +FH+ AV
Sbjct: 307 GTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAV 366
Query: 204 TSLGEVYTWGYG--RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
T+ G++Y WG G G LG + SG A+ P R+ + VK I+ HT
Sbjct: 367 TASGDLYAWGDGDHNAGLLG-----LGSG-ASHWKPVRILGQMEGIYVKAISCGPWHTAF 420
Query: 262 ATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVV------- 313
T G++FT+G G LG+ + PR V +L + I A H+A V
Sbjct: 421 VTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEA 480
Query: 314 SESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGER 373
+ SG++FTWG +G+LG+G + P V L VA + T+ L G+
Sbjct: 481 TSSGKLFTWGDGDDGRLGHG--DIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQ- 537
Query: 374 VIVARNLKKSGS---TPLKFHRKI-KLHVVSIAAGMVHSTALTEDGALFYWASS------ 423
V S P + K V +A G H L ++ W
Sbjct: 538 VYAMGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLG 597
Query: 424 --DPDLRCQQ--LYSMCGRNVVSISAGKYWTAAV 453
D + RC + ++ G+ V + G +TA +
Sbjct: 598 HGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 212 (79.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 86/357 (24%), Positives = 153/357 (42%)
Query: 147 GSGYNSVAT--EVFSWGS--------GANYQLGTGNAHLQK--LPCKVDSLHGFVIKLIS 194
GS + + + +VF WG G ++ G+ ++ + LP + S + IS
Sbjct: 246 GSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSIS 305
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
++V VT G++Y+WG GGRLGH G + + ++ V+
Sbjct: 306 CGTNYAVLVTKQGQMYSWGEESGGRLGH-------GVCSYVPHPKLIDEFNGSTVELADC 358
Query: 255 AKHHTVLATEGGEVFTWGS--NREGQLGYTSVDTQPTPRRV-SSLK-LKIIAVAAANKHT 310
+ HT T G+++ WG + G LG S + P R+ ++ + + A++ HT
Sbjct: 359 GEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHT 418
Query: 311 AVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTI-VLGA 369
A V+ G++FT+G G LG+G + S PR VE+L G + A +H+ V+
Sbjct: 419 AFVTSEGKLFTFGDGTFGALGHG--DRISTNIPREVEALNGCRTIKAACGVWHSAAVVSV 476
Query: 370 DGERVIVARNLK-KSGSTPLKFHRKIKLHVV-------------SIAAGMVHSTALTEDG 415
GE + G H I+ ++ +A G + AL+ G
Sbjct: 477 FGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSG 536
Query: 416 ALFYWASSDPD---LRCQQ-LYSMCGRNVVS-ISAGKYWTAAVTATGDVYMWDGKKS 467
++ ++DP +R + G++ V ++ G + A + + +VY W GK S
Sbjct: 537 QVYAMGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTW-GKGS 592
Score = 43 (20.2 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 689 PKADANQEISKQVRALRKKLQQIEMLEVKLSN--GHILDEQQIAKLQTKSVLER 740
PK +NQ +S ++ L+ +++++ + KL G + ++A L + E+
Sbjct: 869 PKK-SNQCLSHEISVLKAQVEELTLKSKKLETELGKTSKKLEVAVLMARDDAEK 921
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 241 (89.9 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 95/361 (26%), Positives = 148/361 (40%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKV-DSLHGFVIKLISAAKFHSVAVTSLGEVY 210
S A +F+WG+ + QLG G+ LP ++ D IK ++ HS VT G+++
Sbjct: 12 SAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLF 71
Query: 211 TWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
G + G+LG H+ + T + L ++ +A T++ TE G+V +
Sbjct: 72 VCGLNKDGQLGLG----HTEEVLRFT---ICKPLRGCPIRQVACGWDFTIMLTEKGQVLS 124
Query: 271 WGSNREGQLGYTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCN--RE 327
GSN GQLG + P+ + L+ K++ VAA +H + +G VF WG
Sbjct: 125 CGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASS 184
Query: 328 GQL---GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK--- 381
G+ G + P V L+ V A H+ L GE + RN
Sbjct: 185 GRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQL 244
Query: 382 KSGSTPLKFHRKIKLH------VVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSM 435
S + L ++I+ H V ++ +G H A TE G +F W +D Y
Sbjct: 245 ASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRAD--------YGQ 296
Query: 436 CGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLI 495
GR + A K V + + S +P LH + AT +S G H L
Sbjct: 297 LGRRLEPPEAQK----PVEQDSSLAFQGPQNSVPSP-----LHCLTGATEISCGSEHNLA 347
Query: 496 V 496
V
Sbjct: 348 V 348
Score = 207 (77.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 67/201 (33%), Positives = 99/201 (49%)
Query: 141 PVLQVV-GSGYNSVATE---VFSWGSGANYQLGTGNAHLQ-KLPCKVDSLHGFVIKLISA 195
P+ QV G + + TE V S GS A QLG + + +P ++ L V+ ++A
Sbjct: 102 PIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVV-CVAA 160
Query: 196 AKFHSVAVTSLGEVYTWGYG--RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
H++A T+ G V+ WG G GR P ++ A P RVT S V +A
Sbjct: 161 GLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAK-EPSRVTGLENSTAVCAVA 219
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL---KIIAVAAANKHT 310
+ H L T+ GE++ WG N+ GQL +V P P+R+ + K+ AV + H
Sbjct: 220 GSDHSASL-TDTGELYVWGRNKHGQLASRAVFL-PLPQRIEAHYFQDEKVTAVWSGWTHL 277
Query: 311 AVVSESGEVFTWGCNREGQLG 331
+E+G+VFTWG GQLG
Sbjct: 278 VAKTETGKVFTWGRADYGQLG 298
Score = 170 (64.9 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 68/242 (28%), Positives = 106/242 (43%)
Query: 200 SVAVTSLGEVYTWG---YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
S V++ ++ WG YG+ G LGH + D V P++++ + +K++
Sbjct: 8 SETVSAAAVLFAWGANSYGQLG-LGHKE-D-------VFLPQQLSDFCQAGCIKSVTGGG 58
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK---IIAVAAANKHTAVV 313
H+ + T+GG++F G N++GQLG T+ R L+ I VA T ++
Sbjct: 59 GHSAVVTDGGDLFVCGLNKDGQLGLGH--TEEVLRFTICKPLRGCPIRQVACGWDFTIML 116
Query: 314 SESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGER 373
+E G+V + G N GQLG P+ +E L+ K +V VAA H + A G
Sbjct: 117 TEKGQVLSCGSNAFGQLGV-PHGPRKCVVPQAIECLREK-VVCVAAGLRHALATTATGSV 174
Query: 374 VIVARNLKKSG-------STPLKFHRKIKLHVVSI--------AAGMVHSTALTEDGALF 418
L SG + PL K V + AG HS +LT+ G L+
Sbjct: 175 FQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELY 234
Query: 419 YW 420
W
Sbjct: 235 VW 236
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/198 (29%), Positives = 94/198 (47%)
Query: 147 GSGYNSVATE---VFSWGSGANYQLGTGNAH--LQKLPCKVDSLHGFVIKLISAAKFHSV 201
G G+++V T+ +F G + QLG G+ L+ CK L G I+ ++ ++
Sbjct: 57 GGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICK--PLRGCPIRQVACGWDFTI 114
Query: 202 AVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
+T G+V + G G+LG P H + V+ P+ + L +V +AA H +
Sbjct: 115 MLTEKGQVLSCGSNAFGQLGVP----HGPRKCVV-PQAIEC-L-REKVVCVAAGLRHALA 167
Query: 262 ATEGGEVFTWG-----SNRE---GQLGYTSVDTQPTPRRVSSLKLKI-IAVAAANKHTAV 312
T G VF WG S R GQ T P RV+ L+ + A + H+A
Sbjct: 168 TTATGSVFQWGTGLASSGRRLCPGQ-NLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSAS 226
Query: 313 VSESGEVFTWGCNREGQL 330
++++GE++ WG N+ GQL
Sbjct: 227 LTDTGELYVWGRNKHGQL 244
Score = 125 (49.1 bits), Expect = 0.00032, P = 0.00032
Identities = 49/190 (25%), Positives = 74/190 (38%)
Query: 177 KLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVIT 236
K P +V L A HS ++T GE+Y WG + G+L + Q
Sbjct: 201 KEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQ----- 255
Query: 237 PRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG--YTSVDTQPTPRRVS 294
R +V + + H V TE G+VFTWG GQLG + Q + S
Sbjct: 256 -RIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDS 314
Query: 295 SLKLK---------------IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
SL + ++ ++H V + +WG N G G GT ++
Sbjct: 315 SLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNV- 372
Query: 340 NYTPRVVESL 349
+TP V++L
Sbjct: 373 -WTPTPVQAL 381
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 188 (71.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 64/210 (30%), Positives = 101/210 (48%)
Query: 130 KSRTPV-DLLSGPVLQVVGSGYNSVATE---VFSWGSGANYQLGTG-NAHLQKLPCKVDS 184
K R+P D L P + V + S TE V + G G QLG G N +K P V S
Sbjct: 8 KRRSPPEDAL--PKSKKVKVSHRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALV-S 64
Query: 185 LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
+ +++ A H+V ++ G+VY++G G LG D + + + P +V
Sbjct: 65 IPEDIVQA-EAGGMHTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVDL-- 117
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE--GQLGYTS-VDTQPTPRRVSSLKLKII 301
+V ++A HT TE G VF WGS R+ G +G + P +V L + ++
Sbjct: 118 -QEKVIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LSVPVV 175
Query: 302 AVAAANKHTAVVSESGEVFTWGCNREGQLG 331
VA+ N H +++ G+++T G +GQLG
Sbjct: 176 KVASGNDHLVMLTVDGDLYTLGSGEQGQLG 205
Score = 182 (69.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 59/178 (33%), Positives = 86/178 (48%)
Query: 258 HTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
H TE G V T G GQLG +V + P VS + I+ A HT +S+S
Sbjct: 27 HRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDIVQAEAGGMHTVCLSKS 85
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIV 376
G+V+++GCN EG LG TS S P V+ L+ K ++ V+A HT L DG RV +
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVD-LQEK-VIQVSAGDSHTAALTEDG-RVFL 142
Query: 377 ARNLKKSGST-----PLK-----FHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD 424
+ + + P+K ++ + VV +A+G H LT DG L+ S +
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTVDGDLYTLGSGE 200
Score = 159 (61.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 69/267 (25%), Positives = 116/267 (43%)
Query: 130 KSRTPVDL-LSGPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGT---------GNAHL 175
KS PV + LS PV++V G+ + + T ++++ GSG QLG G L
Sbjct: 161 KSMVPVQVQLSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGL 220
Query: 176 QKL--P-C---KVDSLHGFV-IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIH 228
++L P C K G V + + + A++S G VY +G +LG
Sbjct: 221 ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGT------ 274
Query: 229 SGQAAVITPRRVTSGLGSRRVKT-IAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDT 286
G + P+ +TS S + + +HHTV G+ ++ G G+LG +
Sbjct: 275 QGTESCFVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE 334
Query: 287 QPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVV 346
+ P + L + +VA V++ G VF WG QLG G A +
Sbjct: 335 KSVPTLIPRLPT-VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG 393
Query: 347 ESLKGKDLVGVAAAKYHTIVLGADGER 373
+ L+ + ++ V++ HT++L D E+
Sbjct: 394 KQLENRVVLTVSSGGQHTVLLVKDKEQ 420
Score = 99 (39.9 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKG--KDLVGVAAAKYHTIVL 367
T +S G V+ +G + QLG T + S + P+ + S K K VG + ++HT+ +
Sbjct: 252 TFAISSEGHVYGFGLSNYHQLG--TQGTESCFVPQNLTSFKNSTKSWVGFSGGQHHTVCM 309
Query: 368 GADGERVIVAR-NLKKSGSTPLKFHRKI-----KLHVVS-IAAGMVHSTALTEDGALFYW 420
++G+ + R + G + + +L VS +A G A+T+DG +F W
Sbjct: 310 DSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPTVSSVACGASVGYAVTKDGRVFAW 369
Score = 45 (20.9 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 30/114 (26%), Positives = 47/114 (41%)
Query: 356 GVAAAKYHTIVLGADG-ERVIVARNL---KKSGSTPLKFHRKIKLHVVSI-AAGMVHSTA 410
G + YH LG G E V +NL K S + + F + H V + + G +S
Sbjct: 263 GFGLSNYHQ--LGTQGTESCFVPQNLTSFKNSTKSWVGFSGG-QHHTVCMDSEGKAYSLG 319
Query: 411 LTEDGALFYWASSDPDLRCQQLYSMCGR--NVVSISAGKYWTAAVTATGDVYMW 462
E G L ++ + + ++ R V S++ G AVT G V+ W
Sbjct: 320 RAEYGRLGLGEGAEE----KSVPTLIPRLPTVSSVACGASVGYAVTKDGRVFAW 369
Score = 43 (20.2 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 428 RCQQLYSMCGRNVVSIS---AGKYWTAAVTATGDVY 460
+C L S R V G Y+T A+++ G VY
Sbjct: 227 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVY 262
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 243 (90.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 77/261 (29%), Positives = 118/261 (45%)
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSG---LGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G G + ++ + P R+ + V ++ + HTV T+ G++++ GSN
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSN 68
Query: 275 REGQLGYTS-VDTQPTPRRVS-SLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+GQLG S + + VS + KII ++A HT V++ G VF WG N GQLG
Sbjct: 69 MDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGM 128
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGST---PLK 389
S TPR V+ + D+V VA+ H I L +G RV V + G P
Sbjct: 129 -ESKFTWQGTPRRVQEIN--DIVQVASGSNHCIALD-EGGRVFVWGE-QADGRCIHRPEP 183
Query: 390 FHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDP------DLR----CQQLYSMCGRN 439
+ + +V + AG H AL+ GA+F W ++ DLR Q ++ M G
Sbjct: 184 VEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG 243
Query: 440 VVSISAGKYWTAAVTATGDVY 460
VV + G T +T G +
Sbjct: 244 VVEAACGDNHTVLLTHCGRTF 264
Score = 241 (89.9 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 77/249 (30%), Positives = 113/249 (45%)
Query: 183 DSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTS 242
+ + G + ++ + H+V +T G++++ G G+LG G ++ P TS
Sbjct: 36 NDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRT--EGSFSIY-PVSWTS 92
Query: 243 GLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDT-QPTPRRVSSLKLKII 301
S ++ I+A + HTV T+ G VF WGSN GQLG S T Q TPRRV + I+
Sbjct: 93 ---SAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIN-DIV 148
Query: 302 AVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAK 361
VA+ + H + E G VF WG +G+ + P VE L G +V V A
Sbjct: 149 QVASGSNHCIALDEGGRVFVWGEQADGRC---------IHRPEPVEQLSGVPIVRVLAGA 199
Query: 362 YHTIVLGADGERVIVARNLK-KSGSTPLK-------FHRKIKLHVVSIAAGMVHSTALTE 413
H + L A G +N + G L+ H+ L VV A G H+ LT
Sbjct: 200 RHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTH 259
Query: 414 DGALFYWAS 422
G F + S
Sbjct: 260 CGRTFSFGS 268
Score = 231 (86.4 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 73/256 (28%), Positives = 115/256 (44%)
Query: 119 QSGASITLEDCKSRTPVDLLSGP-VLQV-VGSGYNSVATE---VFSWGSGANYQLGTGNA 173
Q G E S PV S ++Q+ G + T+ VF+WGS + QLG +
Sbjct: 72 QLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESK 131
Query: 174 HL-QKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQA 232
Q P +V ++ ++++ S + H +A+ G V+ WG GR IH +
Sbjct: 132 FTWQGTPRRVQEIND-IVQVASGSN-HCIALDEGGRVFVWGEQADGRC------IHRPE- 182
Query: 233 AVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR 292
P SG+ RV +A A+H L+ G VFTWG N G+LG + Q + +
Sbjct: 183 ----PVEQLSGVPIVRV--LAGARHCLALSASGA-VFTWGQNNSGELGIDDLRPQTSVQH 235
Query: 293 VSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKG 351
V + L ++ A + HT +++ G F++G + GQ G+G P V L G
Sbjct: 236 VHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFG-KKVEKRTNPTAVSDLIG 294
Query: 352 KDLVGVAAAKYHTIVL 367
+ +AA HTI +
Sbjct: 295 SHVTRIAAGACHTIAI 310
Score = 227 (85.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 81/273 (29%), Positives = 121/273 (44%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPC-KVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
+++S GS + QLG G+ V I ISA + H+V+VT G V+ WG
Sbjct: 61 KMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGS 120
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G+LG G TPRRV + +A+ +H + EGG VF WG
Sbjct: 121 NEHGQLGMESKFTWQG-----TPRRVQE---INDIVQVASGSNHCIALDEGGRVFVWGEQ 172
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
+G+ + +P P V L + I+ V A +H +S SG VFTWG N G+LG
Sbjct: 173 ADGRCIH-----RPEP--VEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGID 225
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL---------GADG-ERVIVARNLKKS 383
++ + V + G +V A HT++L G+D + + ++K
Sbjct: 226 DLRPQTSV--QHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKR 283
Query: 384 GSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGA 416
+ P I HV IAAG H+ A+ + GA
Sbjct: 284 -TNPTAVSDLIGSHVTRIAAGACHTIAICK-GA 314
Score = 210 (79.0 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 75/260 (28%), Positives = 124/260 (47%)
Query: 142 VLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAA 196
++QV + +A + VF WG A+ G + + P V+ L G ++++++ A
Sbjct: 147 IVQVASGSNHCIALDEGGRVFVWGEQAD-----GRC-IHR-PEPVEQLSGVPIVRVLAGA 199
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
+ H +A+++ G V+TWG G LG D Q +V ++ GLG V A
Sbjct: 200 R-HCLALSASGAVFTWGQNNSGELGIDDL---RPQTSVQHVHQM-DGLG---VVEAACGD 251
Query: 257 HHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVS 314
+HTVL T G F++GS+ GQ G+ V+ + P VS L + +AA HT +
Sbjct: 252 NHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC 311
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
+ G + +G N GQLG G + S TPR + L + GV A + T + + G
Sbjct: 312 K-GAPYPFGLNSSGQLGNGKIMTQS--TPRKTDELD--HVTGVFAGYHQTFFVRSSGT-- 364
Query: 375 IVARNLKKSGSTPLKFHRKI 394
+ +N S P+++ K+
Sbjct: 365 -IEQNEIVGPSCPMQYPIKL 383
Score = 172 (65.6 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 267 EVFTWGSNREGQLGYT-SVDTQPTPRRVSSLK-----LKIIAVAAANKHTAVVSESGEVF 320
E+ G EGQLG S T P R+ + +V +HT +++ G+++
Sbjct: 4 ELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMW 63
Query: 321 TWGCNREGQLGYG--TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVAR 378
+ G N +GQLG G T S S Y S K ++ ++A + HT+ + DG + A
Sbjct: 64 SVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAK---IIQISAGRSHTVSVTDDGR--VFAW 118
Query: 379 NLKKSGSTPL--KFH-----RKIKL--HVVSIAAGMVHSTALTEDGALFYWASSDPDLRC 429
+ G + KF R+++ +V +A+G H AL E G +F W D RC
Sbjct: 119 GSNEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQ-ADGRC 177
Query: 430 ----QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKS 467
+ + + G +V + AG A++A+G V+ W S
Sbjct: 178 IHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNS 219
Score = 132 (51.5 bits), Expect = 0.00016, P = 0.00016
Identities = 51/205 (24%), Positives = 88/205 (42%)
Query: 323 GCNR--EGQLGYGTSNSASNYTPRVV---ESLKGKDLVGVAAAKYHTIVLGADGERVIVA 377
GC EGQLG S S R++ + G + V + HT+ L DG+ V
Sbjct: 7 GCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVG 66
Query: 378 RNL--------KKSGST---PLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDP- 425
N+ + GS P+ + K ++ I+AG H+ ++T+DG +F W S++
Sbjct: 67 SNMDGQLGRGSRTEGSFSIYPVSWTSSAK--IIQISAGRSHTVSVTDDGRVFAWGSNEHG 124
Query: 426 DLRCQQLYSMCG--------RNVVSISAGKYWTAAVTATGDVYMW----DGKKSKDNPPL 473
L + ++ G ++V +++G A+ G V++W DG+ P
Sbjct: 125 QLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQADGR-CIHRPEP 183
Query: 474 VTRLHGIKKATSVSVGETHLLIVGS 498
V +L G+ V G H L + +
Sbjct: 184 VEQLSGVP-IVRVLAGARHCLALSA 207
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 243 (90.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 77/261 (29%), Positives = 118/261 (45%)
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSG---LGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G G + ++ + P R+ + V ++ + HTV T+ G++++ GSN
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSN 68
Query: 275 REGQLGYTS-VDTQPTPRRVS-SLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
+GQLG S + + VS + KII ++A HT V++ G VF WG N GQLG
Sbjct: 69 MDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGM 128
Query: 333 GTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGST---PLK 389
S TPR V+ + D+V VA+ H I L +G RV V + G P
Sbjct: 129 -ESKFTWQGTPRRVQEIN--DIVQVASGSNHCIALD-EGGRVFVWGE-QADGRCIHRPEP 183
Query: 390 FHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDP------DLR----CQQLYSMCGRN 439
+ + +V + AG H AL+ GA+F W ++ DLR Q ++ M G
Sbjct: 184 VEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG 243
Query: 440 VVSISAGKYWTAAVTATGDVY 460
VV + G T +T G +
Sbjct: 244 VVEAACGDNHTVLLTHCGRTF 264
Score = 241 (89.9 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 77/249 (30%), Positives = 113/249 (45%)
Query: 183 DSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTS 242
+ + G + ++ + H+V +T G++++ G G+LG G ++ P TS
Sbjct: 36 NDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRT--EGSFSIY-PVSWTS 92
Query: 243 GLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDT-QPTPRRVSSLKLKII 301
S ++ I+A + HTV T+ G VF WGSN GQLG S T Q TPRRV + I+
Sbjct: 93 ---SAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEIN-DIV 148
Query: 302 AVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAK 361
VA+ + H + E G VF WG +G+ + P VE L G +V V A
Sbjct: 149 QVASGSNHCIALDEGGRVFVWGEQADGRC---------IHRPEPVEQLSGVPIVRVLAGA 199
Query: 362 YHTIVLGADGERVIVARNLK-KSGSTPLK-------FHRKIKLHVVSIAAGMVHSTALTE 413
H + L A G +N + G L+ H+ L VV A G H+ LT
Sbjct: 200 RHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTH 259
Query: 414 DGALFYWAS 422
G F + S
Sbjct: 260 CGRTFSFGS 268
Score = 231 (86.4 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 73/256 (28%), Positives = 115/256 (44%)
Query: 119 QSGASITLEDCKSRTPVDLLSGP-VLQV-VGSGYNSVATE---VFSWGSGANYQLGTGNA 173
Q G E S PV S ++Q+ G + T+ VF+WGS + QLG +
Sbjct: 72 QLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESK 131
Query: 174 HL-QKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQA 232
Q P +V ++ ++++ S + H +A+ G V+ WG GR IH +
Sbjct: 132 FTWQGTPRRVQEIND-IVQVASGSN-HCIALDEGGRVFVWGEQADGRC------IHRPE- 182
Query: 233 AVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR 292
P SG+ RV +A A+H L+ G VFTWG N G+LG + Q + +
Sbjct: 183 ----PVEQLSGVPIVRV--LAGARHCLALSASGA-VFTWGQNNSGELGIDDLRPQTSVQH 235
Query: 293 VSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKG 351
V + L ++ A + HT +++ G F++G + GQ G+G P V L G
Sbjct: 236 VHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFG-KKVEKRTNPTAVSDLIG 294
Query: 352 KDLVGVAAAKYHTIVL 367
+ +AA HTI +
Sbjct: 295 SHVTRIAAGACHTIAI 310
Score = 227 (85.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 81/273 (29%), Positives = 121/273 (44%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPC-KVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
+++S GS + QLG G+ V I ISA + H+V+VT G V+ WG
Sbjct: 61 KMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGS 120
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G+LG G TPRRV + +A+ +H + EGG VF WG
Sbjct: 121 NEHGQLGMESKFTWQG-----TPRRVQE---INDIVQVASGSNHCIALDEGGRVFVWGEQ 172
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
+G+ + +P P V L + I+ V A +H +S SG VFTWG N G+LG
Sbjct: 173 ADGRCIH-----RPEP--VEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGID 225
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL---------GADG-ERVIVARNLKKS 383
++ + V + G +V A HT++L G+D + + ++K
Sbjct: 226 DLRPQTSV--QHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKR 283
Query: 384 GSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGA 416
+ P I HV IAAG H+ A+ + GA
Sbjct: 284 -TNPTAVSDLIGSHVTRIAAGACHTIAICK-GA 314
Score = 210 (79.0 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 75/260 (28%), Positives = 124/260 (47%)
Query: 142 VLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF-VIKLISAA 196
++QV + +A + VF WG A+ G + + P V+ L G ++++++ A
Sbjct: 147 IVQVASGSNHCIALDEGGRVFVWGEQAD-----GRC-IHR-PEPVEQLSGVPIVRVLAGA 199
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
+ H +A+++ G V+TWG G LG D Q +V ++ GLG V A
Sbjct: 200 R-HCLALSASGAVFTWGQNNSGELGIDDL---RPQTSVQHVHQM-DGLG---VVEAACGD 251
Query: 257 HHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVS 314
+HTVL T G F++GS+ GQ G+ V+ + P VS L + +AA HT +
Sbjct: 252 NHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC 311
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
+ G + +G N GQLG G + S TPR + L + GV A + T + + G
Sbjct: 312 K-GAPYPFGLNSSGQLGNGKIMTQS--TPRKTDELD--HVTGVFAGYHQTFFVRSSGT-- 364
Query: 375 IVARNLKKSGSTPLKFHRKI 394
+ +N S P+++ K+
Sbjct: 365 -IEQNEIVGPSCPMQYPIKL 383
Score = 172 (65.6 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 267 EVFTWGSNREGQLGYT-SVDTQPTPRRVSSLK-----LKIIAVAAANKHTAVVSESGEVF 320
E+ G EGQLG S T P R+ + +V +HT +++ G+++
Sbjct: 4 ELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMW 63
Query: 321 TWGCNREGQLGYG--TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVAR 378
+ G N +GQLG G T S S Y S K ++ ++A + HT+ + DG + A
Sbjct: 64 SVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAK---IIQISAGRSHTVSVTDDGR--VFAW 118
Query: 379 NLKKSGSTPL--KFH-----RKIKL--HVVSIAAGMVHSTALTEDGALFYWASSDPDLRC 429
+ G + KF R+++ +V +A+G H AL E G +F W D RC
Sbjct: 119 GSNEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQ-ADGRC 177
Query: 430 ----QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKS 467
+ + + G +V + AG A++A+G V+ W S
Sbjct: 178 IHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNS 219
Score = 132 (51.5 bits), Expect = 0.00016, P = 0.00016
Identities = 51/205 (24%), Positives = 88/205 (42%)
Query: 323 GCNR--EGQLGYGTSNSASNYTPRVV---ESLKGKDLVGVAAAKYHTIVLGADGERVIVA 377
GC EGQLG S S R++ + G + V + HT+ L DG+ V
Sbjct: 7 GCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVG 66
Query: 378 RNL--------KKSGST---PLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDP- 425
N+ + GS P+ + K ++ I+AG H+ ++T+DG +F W S++
Sbjct: 67 SNMDGQLGRGSRTEGSFSIYPVSWTSSAK--IIQISAGRSHTVSVTDDGRVFAWGSNEHG 124
Query: 426 DLRCQQLYSMCG--------RNVVSISAGKYWTAAVTATGDVYMW----DGKKSKDNPPL 473
L + ++ G ++V +++G A+ G V++W DG+ P
Sbjct: 125 QLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQADGR-CIHRPEP 183
Query: 474 VTRLHGIKKATSVSVGETHLLIVGS 498
V +L G+ V G H L + +
Sbjct: 184 VEQLSGVP-IVRVLAGARHCLALSA 207
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 258 (95.9 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 99/335 (29%), Positives = 149/335 (44%)
Query: 137 LLSGPVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHL--QKLPCKVDSLHGFVI 190
L +G + V G +++A + +++WG+ QLGTG + P K+ + +
Sbjct: 186 LSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTA 245
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
ISA + HSVA+ + G +++WG G LG+ + A V TP RV G GS V
Sbjct: 246 --ISAGEMHSVALKADGSLWSWGQNLFGELGN---GVALPGANVTTPTRV--GTGSDWV- 297
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR-VSSLKL-KIIAVAAANK 308
IAA HTV G V WG+N +G +G +V + TP V+ + L +A+AA
Sbjct: 298 AIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTG 357
Query: 309 HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLG 368
+ V +G VF WG N GQLG GT + + P V+ S +GV ++ L
Sbjct: 358 VSFSVLANGTVFGWGGNGAGQLGNGTFGAVT--APTVL-SAGASAWLGVEPGGAFSLGLR 414
Query: 369 ADGERVIVARNLKKSGSTPLKFHRKIKLHVV-------SIAAGMVHSTALTEDGALFYWA 421
++G N I + VV + A G HS A+ DG L+ W
Sbjct: 415 SNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Query: 422 -SSDPDLRCQQLYSMCGRNVVSI----SAGKYWTA 451
+S L + +++ SAG WTA
Sbjct: 475 DNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTA 509
Score = 250 (93.1 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 86/300 (28%), Positives = 143/300 (47%)
Query: 146 VGSGYNSVAT---EVFSWGSGANY--QLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHS 200
V +G N V T + W +G+N QLG G + P +V K ++A HS
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW----KTVAAGTTHS 92
Query: 201 VAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAV--ITPRRVTSGLGSRRVKTIAAAKHH 258
+ + + G ++ WG G+LG P + +GQ A +P R+ G G+ V +A
Sbjct: 93 LGIKADGSLWAWGSNLFGQLGQP---LVNGQLATNKFSPIRI--GTGNDWVAV--SAGEL 145
Query: 259 TVLATEG-GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL---KIIAVAAANKHTAVVS 314
T +G G +++WG+N G+LG + ++P P +V + L + +AVAA +H +
Sbjct: 146 TSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQ 205
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
G ++ WG N GQLG G + N TP + + +D ++A + H++ L ADG
Sbjct: 206 ADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGT--DRDWTAISAGEMHSVALKADGSLW 263
Query: 375 IVARNL-KKSGS----------TPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASS 423
+NL + G+ TP + V+IAAG +H+ AL +G + W ++
Sbjct: 264 SWGQNLFGELGNGVALPGANVTTPTRVGTGSDW--VAIAAGALHTVALHRNGTVSAWGNN 321
Score = 222 (83.2 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 77/284 (27%), Positives = 128/284 (45%)
Query: 157 VFSWGSGANYQLG----TGNAHLQKL-PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
+++WGS QLG G K P ++ + + +V +SA + S + G +++
Sbjct: 101 LWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVA--VSAGELTSFGLKGDGTLWS 158
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G LG + Q + V L + R +AA H + G ++ W
Sbjct: 159 WGNNLFGELGDGT-TVSRPQPVQV----VADPLSNGRYVAVAAGGEHALALQADGTLWAW 213
Query: 272 GSNREGQLGY--TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQ 329
G+N GQLG T + PTP ++ + + A++A H+ + G +++WG N G+
Sbjct: 214 GANLTGQLGTGGTGILPNPTPLKIGTDR-DWTAISAGEMHSVALKADGSLWSWGQNLFGE 272
Query: 330 LGYGTSNSASNYT-PRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKS-G--- 384
LG G + +N T P V + G D V +AA HT+ L +G N + + G
Sbjct: 273 LGNGVALPGANVTTPTRVGT--GSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGT 330
Query: 385 ----STPLKFHRKIKL-HVVSIAAGMVHSTALTEDGALFYWASS 423
STP + L + V+IAAG S ++ +G +F W +
Sbjct: 331 VANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGN 374
Score = 191 (72.3 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 84/328 (25%), Positives = 136/328 (41%)
Query: 121 GASITLEDCKSRTPVDLLSGPVLQVVGSG-YNSVATE----VFSWGSGANYQLGTGNAHL 175
G + L TP + +G + +G ++VA V +WG+ A +G G
Sbjct: 274 GNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVAN 333
Query: 176 QKLPCKVDSLHGFVIKL-ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAV 234
+ P + + V + I+A S +V + G V+ WG G+LG+ F AV
Sbjct: 334 RSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTF------GAV 387
Query: 235 ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG--YTSVDTQPTPRR 292
P +++G + A ++ G ++ WG N GQLG T+ P P
Sbjct: 388 TAPTVLSAGASAWLGVEPGGA--FSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVV 445
Query: 293 VSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE----S 348
+ + A A H+ V G ++ WG N GQLG G++ +AS TP+ + +
Sbjct: 446 GGAGNWRTTATGTA--HSVAVRADGTLWAWGDNSSGQLGIGSTVAAS--TPQQITVTNPA 501
Query: 349 LKGKDLVGVAAAKYHTIVLGADGERVIVARNL---------KKSGSTPLKFHR----KIK 395
G D VA H++ L ADG N + +TP++
Sbjct: 502 SAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFD 561
Query: 396 LHVVSIAAGMVHSTALTEDGALFYWASS 423
+ V++AAG V S AL DG ++ W +
Sbjct: 562 RNWVAVAAGGVFSLALQADGTIWTWGDN 589
Score = 173 (66.0 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
Identities = 58/234 (24%), Positives = 104/234 (44%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLH----GFVIKLISAAKFHSVAVTSLGEVYTW 212
+++WG ++ QLG G+ P ++ + G ++ HS+ + + G +++W
Sbjct: 470 LWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSW 529
Query: 213 GYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL-GS--RRVKTIAAAKHHTVLATEGGEVF 269
G G+LG +G + TP ++ +G G+ R +AA ++ G ++
Sbjct: 530 GDNTFGQLGDG-----TGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIW 584
Query: 270 TWGSNREGQLGYTSVDTQPTPRRVSSLKLKI------------IAVAAANKHTAVVSESG 317
TWG N QLG P +R +L + +A+AA H + G
Sbjct: 585 TWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADG 644
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
++ WG N GQLG G + + +TP V + +G V +AA H++ +DG
Sbjct: 645 TLWAWGANSVGQLGNGVTTAT--FTPVQVINAEGVPYVSLAAGTSHSLAGRSDG 696
Score = 162 (62.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 60/212 (28%), Positives = 95/212 (44%)
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
I+A + H +++ + G ++ WG G+LG+ A TP +V + G V ++
Sbjct: 630 IAAGQDHGLSLQADGTLWAWGANSVGQLGN------GVTTATFTPVQVINAEGVPYV-SL 682
Query: 253 AAAKHHTVLATEGGEVFTWGSNREGQLGYT----SVDT-QPTPRRVSSLKLKIIAVAAAN 307
AA H++ G ++ WG+N GQLG D P P V + L V+AA+
Sbjct: 683 AAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAAD 742
Query: 308 ---------KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
H+A + +G ++TWG N GQLG GT+ A P + L+ + V A
Sbjct: 743 DWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEAD--IPTAL--LEPRISVSPA 798
Query: 359 AAKYHTIVLGADGE--RVIVARNLKKSGSTPL 388
+ + +G R + NL GS PL
Sbjct: 799 SLAFGPAPIGIPPSPTRTLTITNL---GSAPL 827
Score = 148 (57.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 57/205 (27%), Positives = 91/205 (44%)
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
AA I G V +AA +H + G ++ GSN+ GQLG + + +P
Sbjct: 17 AAFILATLGAPAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPV 76
Query: 292 RVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNS--ASN-YTPRVVES 348
+V K VAA H+ + G ++ WG N GQLG N A+N ++P + +
Sbjct: 77 QVPGT-WK--TVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGT 133
Query: 349 LKGKDLVGVAAAKYHTIVLGADGERVIVARNL--KKSGSTPLKFHRKIKL--------HV 398
G D V V+A + + L DG NL + T + + +++
Sbjct: 134 --GNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRY 191
Query: 399 VSIAAGMVHSTALTEDGALFYWASS 423
V++AAG H+ AL DG L+ W ++
Sbjct: 192 VAVAAGGEHALALQADGTLWAWGAN 216
Score = 144 (55.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/156 (26%), Positives = 68/156 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGR 216
+++WG+ + QLG G P +V + G ++A HS+A S G ++ WG
Sbjct: 646 LWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNT 705
Query: 217 GGRLG---HP-DFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK--HHTVLATEGGEVFT 270
G+LG HP D D + Q + R +TS S + A H+ G ++T
Sbjct: 706 SGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWT 765
Query: 271 WGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAA 306
WG N GQLG + P + ++ + + A
Sbjct: 766 WGQNTSGQLGNGTTTEADIPTALLEPRISVSPASLA 801
Score = 62 (26.9 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 399 VSIAAGMVHSTALTEDGALFYWASS------DPDLRCQQLYSMCGR-----NVVSISAGK 447
V+IAAG +H+ AL +G + W ++ D + + ++ N V+I+AG
Sbjct: 297 VAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGT 356
Query: 448 YWTAAVTATGDVYMWDG 464
+ +V A G V+ W G
Sbjct: 357 GVSFSVLANGTVFGWGG 373
Score = 61 (26.5 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 399 VSIAAGMVHSTALTEDGALFYW-ASSDPDL---------RCQQLYSMCGRNVVSISAGKY 448
V+IAAG H +L DG L+ W A+S L Q+ + G VS++AG
Sbjct: 628 VAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTS 687
Query: 449 WTAAVTATGDVYMWDGKKS 467
+ A + G ++ W S
Sbjct: 688 HSLAGRSDGTLWAWGNNTS 706
Score = 60 (26.2 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 400 SIAAGMVHSTALTEDGALFYWASSD---------PDLRCQQLYSMCG------RNVVSIS 444
++A G HS L DG L+ W + R + + G RN V+++
Sbjct: 509 AVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVA 568
Query: 445 AGKYWTAAVTATGDVYMW 462
AG ++ A+ A G ++ W
Sbjct: 569 AGGVFSLALQADGTIWTW 586
Score = 60 (26.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 400 SIAAGMVHSTALTEDGALFYWASSD----------PDLRCQQLYSM-CGRNVVSISAGKY 448
+I+AG +HS AL DG+L+ W + P + G + V+I+AG
Sbjct: 245 AISAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAAGAL 304
Query: 449 WTAAVTATGDVYMW 462
T A+ G V W
Sbjct: 305 HTVALHRNGTVSAW 318
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
TS +++T + L GVAA I +G+DG
Sbjct: 1670 TSPDGASWTINIGAEYINSSLYGVAAGNGSYIAVGSDG 1707
Score = 46 (21.3 bits), Expect = 8.2e-15, Sum P(3) = 8.2e-15
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 403 AGMVHSTALTEDGALFYWASS 423
AG HS AL +G L+ W +
Sbjct: 749 AGGSHSAALKSNGTLWTWGQN 769
Score = 42 (19.8 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 31/103 (30%), Positives = 39/103 (37%)
Query: 882 PKEIALPPPPTPRSEGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGR 941
P I +PP PT G A P +A I S + VN N P G
Sbjct: 804 PAPIGIPPSPTRTLTITNLGSA--PLSAA----IASNNAAFTVNPAACNNL----PPAGF 853
Query: 942 SEGKVLLSSFMTSKPIPVVSARAQQATDGDKSTP--PWAASGT 982
E V +F+ + P+ V SA T D TP A+GT
Sbjct: 854 CEITV---TFVPALPVGVKSATLT-ITSNDPVTPLVSVGATGT 892
Score = 39 (18.8 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 442 SISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGE 490
S+ A +A +++ W + K ++R+ T V+VGE
Sbjct: 1052 SVRANGSSISATFVPRELHEWSWQNPKPQGQAISRIATDGNGTYVAVGE 1100
Score = 38 (18.4 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 422 SSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGI 480
S++ L + Y G N+ I+ G AV A+G Y D S+ ++T +GI
Sbjct: 1438 STNTGLTWTRRYLSPGHNIRGIAYGNGVFVAVGASG--YDLDQNASRQ-AIILTSTNGI 1493
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 258 (95.9 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 99/335 (29%), Positives = 149/335 (44%)
Query: 137 LLSGPVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHL--QKLPCKVDSLHGFVI 190
L +G + V G +++A + +++WG+ QLGTG + P K+ + +
Sbjct: 186 LSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTA 245
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
ISA + HSVA+ + G +++WG G LG+ + A V TP RV G GS V
Sbjct: 246 --ISAGEMHSVALKADGSLWSWGQNLFGELGN---GVALPGANVTTPTRV--GTGSDWV- 297
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR-VSSLKL-KIIAVAAANK 308
IAA HTV G V WG+N +G +G +V + TP V+ + L +A+AA
Sbjct: 298 AIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTG 357
Query: 309 HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLG 368
+ V +G VF WG N GQLG GT + + P V+ S +GV ++ L
Sbjct: 358 VSFSVLANGTVFGWGGNGAGQLGNGTFGAVT--APTVL-SAGASAWLGVEPGGAFSLGLR 414
Query: 369 ADGERVIVARNLKKSGSTPLKFHRKIKLHVV-------SIAAGMVHSTALTEDGALFYWA 421
++G N I + VV + A G HS A+ DG L+ W
Sbjct: 415 SNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Query: 422 -SSDPDLRCQQLYSMCGRNVVSI----SAGKYWTA 451
+S L + +++ SAG WTA
Sbjct: 475 DNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTA 509
Score = 250 (93.1 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 86/300 (28%), Positives = 143/300 (47%)
Query: 146 VGSGYNSVAT---EVFSWGSGANY--QLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHS 200
V +G N V T + W +G+N QLG G + P +V K ++A HS
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW----KTVAAGTTHS 92
Query: 201 VAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAV--ITPRRVTSGLGSRRVKTIAAAKHH 258
+ + + G ++ WG G+LG P + +GQ A +P R+ G G+ V +A
Sbjct: 93 LGIKADGSLWAWGSNLFGQLGQP---LVNGQLATNKFSPIRI--GTGNDWVAV--SAGEL 145
Query: 259 TVLATEG-GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL---KIIAVAAANKHTAVVS 314
T +G G +++WG+N G+LG + ++P P +V + L + +AVAA +H +
Sbjct: 146 TSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQ 205
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
G ++ WG N GQLG G + N TP + + +D ++A + H++ L ADG
Sbjct: 206 ADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGT--DRDWTAISAGEMHSVALKADGSLW 263
Query: 375 IVARNL-KKSGS----------TPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASS 423
+NL + G+ TP + V+IAAG +H+ AL +G + W ++
Sbjct: 264 SWGQNLFGELGNGVALPGANVTTPTRVGTGSDW--VAIAAGALHTVALHRNGTVSAWGNN 321
Score = 222 (83.2 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 77/284 (27%), Positives = 128/284 (45%)
Query: 157 VFSWGSGANYQLG----TGNAHLQKL-PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
+++WGS QLG G K P ++ + + +V +SA + S + G +++
Sbjct: 101 LWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVA--VSAGELTSFGLKGDGTLWS 158
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G LG + Q + V L + R +AA H + G ++ W
Sbjct: 159 WGNNLFGELGDGT-TVSRPQPVQV----VADPLSNGRYVAVAAGGEHALALQADGTLWAW 213
Query: 272 GSNREGQLGY--TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQ 329
G+N GQLG T + PTP ++ + + A++A H+ + G +++WG N G+
Sbjct: 214 GANLTGQLGTGGTGILPNPTPLKIGTDR-DWTAISAGEMHSVALKADGSLWSWGQNLFGE 272
Query: 330 LGYGTSNSASNYT-PRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKS-G--- 384
LG G + +N T P V + G D V +AA HT+ L +G N + + G
Sbjct: 273 LGNGVALPGANVTTPTRVGT--GSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGT 330
Query: 385 ----STPLKFHRKIKL-HVVSIAAGMVHSTALTEDGALFYWASS 423
STP + L + V+IAAG S ++ +G +F W +
Sbjct: 331 VANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGN 374
Score = 191 (72.3 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 84/328 (25%), Positives = 136/328 (41%)
Query: 121 GASITLEDCKSRTPVDLLSGPVLQVVGSG-YNSVATE----VFSWGSGANYQLGTGNAHL 175
G + L TP + +G + +G ++VA V +WG+ A +G G
Sbjct: 274 GNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVAN 333
Query: 176 QKLPCKVDSLHGFVIKL-ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAV 234
+ P + + V + I+A S +V + G V+ WG G+LG+ F AV
Sbjct: 334 RSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTF------GAV 387
Query: 235 ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG--YTSVDTQPTPRR 292
P +++G + A ++ G ++ WG N GQLG T+ P P
Sbjct: 388 TAPTVLSAGASAWLGVEPGGA--FSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVV 445
Query: 293 VSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE----S 348
+ + A A H+ V G ++ WG N GQLG G++ +AS TP+ + +
Sbjct: 446 GGAGNWRTTATGTA--HSVAVRADGTLWAWGDNSSGQLGIGSTVAAS--TPQQITVTNPA 501
Query: 349 LKGKDLVGVAAAKYHTIVLGADGERVIVARNL---------KKSGSTPLKFHR----KIK 395
G D VA H++ L ADG N + +TP++
Sbjct: 502 SAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFD 561
Query: 396 LHVVSIAAGMVHSTALTEDGALFYWASS 423
+ V++AAG V S AL DG ++ W +
Sbjct: 562 RNWVAVAAGGVFSLALQADGTIWTWGDN 589
Score = 173 (66.0 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
Identities = 58/234 (24%), Positives = 104/234 (44%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLH----GFVIKLISAAKFHSVAVTSLGEVYTW 212
+++WG ++ QLG G+ P ++ + G ++ HS+ + + G +++W
Sbjct: 470 LWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSW 529
Query: 213 GYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL-GS--RRVKTIAAAKHHTVLATEGGEVF 269
G G+LG +G + TP ++ +G G+ R +AA ++ G ++
Sbjct: 530 GDNTFGQLGDG-----TGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIW 584
Query: 270 TWGSNREGQLGYTSVDTQPTPRRVSSLKLKI------------IAVAAANKHTAVVSESG 317
TWG N QLG P +R +L + +A+AA H + G
Sbjct: 585 TWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADG 644
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
++ WG N GQLG G + + +TP V + +G V +AA H++ +DG
Sbjct: 645 TLWAWGANSVGQLGNGVTTAT--FTPVQVINAEGVPYVSLAAGTSHSLAGRSDG 696
Score = 162 (62.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 60/212 (28%), Positives = 95/212 (44%)
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
I+A + H +++ + G ++ WG G+LG+ A TP +V + G V ++
Sbjct: 630 IAAGQDHGLSLQADGTLWAWGANSVGQLGN------GVTTATFTPVQVINAEGVPYV-SL 682
Query: 253 AAAKHHTVLATEGGEVFTWGSNREGQLGYT----SVDT-QPTPRRVSSLKLKIIAVAAAN 307
AA H++ G ++ WG+N GQLG D P P V + L V+AA+
Sbjct: 683 AAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAAD 742
Query: 308 ---------KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
H+A + +G ++TWG N GQLG GT+ A P + L+ + V A
Sbjct: 743 DWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEAD--IPTAL--LEPRISVSPA 798
Query: 359 AAKYHTIVLGADGE--RVIVARNLKKSGSTPL 388
+ + +G R + NL GS PL
Sbjct: 799 SLAFGPAPIGIPPSPTRTLTITNL---GSAPL 827
Score = 148 (57.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 57/205 (27%), Positives = 91/205 (44%)
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
AA I G V +AA +H + G ++ GSN+ GQLG + + +P
Sbjct: 17 AAFILATLGAPAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPV 76
Query: 292 RVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNS--ASN-YTPRVVES 348
+V K VAA H+ + G ++ WG N GQLG N A+N ++P + +
Sbjct: 77 QVPGT-WK--TVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGT 133
Query: 349 LKGKDLVGVAAAKYHTIVLGADGERVIVARNL--KKSGSTPLKFHRKIKL--------HV 398
G D V V+A + + L DG NL + T + + +++
Sbjct: 134 --GNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRY 191
Query: 399 VSIAAGMVHSTALTEDGALFYWASS 423
V++AAG H+ AL DG L+ W ++
Sbjct: 192 VAVAAGGEHALALQADGTLWAWGAN 216
Score = 144 (55.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/156 (26%), Positives = 68/156 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGR 216
+++WG+ + QLG G P +V + G ++A HS+A S G ++ WG
Sbjct: 646 LWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNT 705
Query: 217 GGRLG---HP-DFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK--HHTVLATEGGEVFT 270
G+LG HP D D + Q + R +TS S + A H+ G ++T
Sbjct: 706 SGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWT 765
Query: 271 WGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAA 306
WG N GQLG + P + ++ + + A
Sbjct: 766 WGQNTSGQLGNGTTTEADIPTALLEPRISVSPASLA 801
Score = 62 (26.9 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 399 VSIAAGMVHSTALTEDGALFYWASS------DPDLRCQQLYSMCGR-----NVVSISAGK 447
V+IAAG +H+ AL +G + W ++ D + + ++ N V+I+AG
Sbjct: 297 VAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGT 356
Query: 448 YWTAAVTATGDVYMWDG 464
+ +V A G V+ W G
Sbjct: 357 GVSFSVLANGTVFGWGG 373
Score = 61 (26.5 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 399 VSIAAGMVHSTALTEDGALFYW-ASSDPDL---------RCQQLYSMCGRNVVSISAGKY 448
V+IAAG H +L DG L+ W A+S L Q+ + G VS++AG
Sbjct: 628 VAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTS 687
Query: 449 WTAAVTATGDVYMWDGKKS 467
+ A + G ++ W S
Sbjct: 688 HSLAGRSDGTLWAWGNNTS 706
Score = 60 (26.2 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 400 SIAAGMVHSTALTEDGALFYWASSD---------PDLRCQQLYSMCG------RNVVSIS 444
++A G HS L DG L+ W + R + + G RN V+++
Sbjct: 509 AVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVA 568
Query: 445 AGKYWTAAVTATGDVYMW 462
AG ++ A+ A G ++ W
Sbjct: 569 AGGVFSLALQADGTIWTW 586
Score = 60 (26.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 400 SIAAGMVHSTALTEDGALFYWASSD----------PDLRCQQLYSM-CGRNVVSISAGKY 448
+I+AG +HS AL DG+L+ W + P + G + V+I+AG
Sbjct: 245 AISAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAAGAL 304
Query: 449 WTAAVTATGDVYMW 462
T A+ G V W
Sbjct: 305 HTVALHRNGTVSAW 318
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
TS +++T + L GVAA I +G+DG
Sbjct: 1670 TSPDGASWTINIGAEYINSSLYGVAAGNGSYIAVGSDG 1707
Score = 46 (21.3 bits), Expect = 8.2e-15, Sum P(3) = 8.2e-15
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 403 AGMVHSTALTEDGALFYWASS 423
AG HS AL +G L+ W +
Sbjct: 749 AGGSHSAALKSNGTLWTWGQN 769
Score = 42 (19.8 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 31/103 (30%), Positives = 39/103 (37%)
Query: 882 PKEIALPPPPTPRSEGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGR 941
P I +PP PT G A P +A I S + VN N P G
Sbjct: 804 PAPIGIPPSPTRTLTITNLGSA--PLSAA----IASNNAAFTVNPAACNNL----PPAGF 853
Query: 942 SEGKVLLSSFMTSKPIPVVSARAQQATDGDKSTP--PWAASGT 982
E V +F+ + P+ V SA T D TP A+GT
Sbjct: 854 CEITV---TFVPALPVGVKSATLT-ITSNDPVTPLVSVGATGT 892
Score = 39 (18.8 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 442 SISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGE 490
S+ A +A +++ W + K ++R+ T V+VGE
Sbjct: 1052 SVRANGSSISATFVPRELHEWSWQNPKPQGQAISRIATDGNGTYVAVGE 1100
Score = 38 (18.4 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 422 SSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGI 480
S++ L + Y G N+ I+ G AV A+G Y D S+ ++T +GI
Sbjct: 1438 STNTGLTWTRRYLSPGHNIRGIAYGNGVFVAVGASG--YDLDQNASRQ-AIILTSTNGI 1493
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 190 (71.9 bits), Expect = 7.4e-10, Sum P(4) = 7.4e-10
Identities = 60/204 (29%), Positives = 101/204 (49%)
Query: 130 KSRTPVDLLS-GPVLQVVGSGYNSVA-TE-----VFSWGSGANYQLGTGNAHLQKLPCKV 182
+S T L S +L V S ++SV T+ V+ G GA ++G N +Q +
Sbjct: 184 ESPTSGQLFSRDKILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIGF-NTDVQYNFIPI 242
Query: 183 DSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTS 242
+ VI+ IS + HS+A+T G +Y+WG G LG + ++ ITPRR+ S
Sbjct: 243 PGIIHKVIQ-ISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRI-S 300
Query: 243 GLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTS-VDTQPTPRRVSSLKLKII 301
++ +AA K ++V T+ ++++WG N GQLG + + TPRRV+ L +I
Sbjct: 301 AFKDYQIIGMAAGKSYSVAWTDT-DIYSWGLNN-GQLGISDHISVVSTPRRVAGLLSPVI 358
Query: 302 AVAAANKHTAVVSESGEVFTWGCN 325
+ T + ++ + + CN
Sbjct: 359 HAVCTTRATICLLQNNSIIAF-CN 381
Score = 154 (59.3 bits), Expect = 3.6e-16, Sum P(5) = 3.6e-16
Identities = 42/132 (31%), Positives = 69/132 (52%)
Query: 57 INSRNIFGLTPLHSAIWRNQVPIVRRLLA-AGADPDARDGESGWSSLHRALHFGHLAVAS 115
IN ++ +G T LH A+ N+ VR LL G D +D ESG+++LHRA++ G+L AS
Sbjct: 45 INQKDRYGRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAAS 104
Query: 116 VLLQ---SGASITLEDCKSRTPVDLLSGPVLQVVGSGYNS--VATEVFSWGSGANYQLGT 170
+LL S S+ ++D + +P LS + + + + E++ +G+ N LG
Sbjct: 105 LLLSKDPSFRSLRIKDKEGLSPFQFLSRVLSSTIHPVLDLPIIGNELYGFGTNVNNTLGI 164
Query: 171 GNAHLQKLPCKV 182
N P +V
Sbjct: 165 ANGKEPSSPERV 176
Score = 148 (57.2 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 63/276 (22%), Positives = 129/276 (46%)
Query: 134 PVDLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGTGNAHLQK------LPCKVD 183
P+ + V+Q+ S +S+A ++SWG + +LG N L+K P ++
Sbjct: 241 PIPGIIHKVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRIS 300
Query: 184 SLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSG 243
+ + I ++A K +SVA T ++Y+WG G +LG D H + V TPRRV +G
Sbjct: 301 AFKDYQIIGMAAGKSYSVAWTDT-DIYSWGLNNG-QLGISD---HI--SVVSTPRRV-AG 352
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVD----TQPTPRRVSSLKLK 299
L S + + + T+ + + + + + +L + +VD + T +S +
Sbjct: 353 LLSPVIHAVCTTRA-TICLLQNNSIIAFCNYNQVKLPF-NVDFGSSLKVTKHPLSLTRFN 410
Query: 300 IIAVAAANKHTAVVSESGEVFTWGC----NREGQLGYGTSNSASNYTPRVVESLKGKDLV 355
+ + A+ AV++E GEV+ + +R+ ++ ++ +TP + +
Sbjct: 411 VRKLLASENKLAVLTELGEVYEFDMKLLLDRDSTSSKNSTRTSFKFTPLWIFESSDLAAL 470
Query: 356 GVAAAKYHTIVL----GADGERVIVARNLKKSGSTP 387
+A ++++L G +R + ++ +KS S+P
Sbjct: 471 DIAWTADNSLILCTRNGTCWKRELRSKKREKSSSSP 506
Score = 144 (55.7 bits), Expect = 3.6e-16, Sum P(5) = 3.6e-16
Identities = 35/133 (26%), Positives = 71/133 (53%)
Query: 241 TSG-LGSR-RVKTIAAAKHHTVLATE--GGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL 296
TSG L SR ++ + A+K H+V+ T+ V+ G G++G+ + D Q + +
Sbjct: 187 TSGQLFSRDKILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIGFNT-DVQYNFIPIPGI 245
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASN----YTPRVVESLKGK 352
K+I ++ ++ H+ +++ G +++WG N G+LG + TPR + + K
Sbjct: 246 IHKVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDY 305
Query: 353 DLVGVAAAKYHTI 365
++G+AA K +++
Sbjct: 306 QIIGMAAGKSYSV 318
Score = 78 (32.5 bits), Expect = 7.0e-10, Sum P(4) = 7.0e-10
Identities = 30/133 (22%), Positives = 65/133 (48%)
Query: 354 LVGVAAAKYHTIVLGADGERVIVARNLKKSG----STPLKFHR-KIK--LH-VVSIAAGM 405
++ V A+K+H++VL + + + + G +T ++++ I +H V+ I+
Sbjct: 197 ILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIGFNTDVQYNFIPIPGIIHKVIQISVSH 256
Query: 406 VHSTALTEDGALFYWASS---------------DP-DLRCQQLYSMCGRNVVSISAGKYW 449
HS ALT+ G+++ W + DP + +++ + ++ ++AGK +
Sbjct: 257 THSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDYQIIGMAAGKSY 316
Query: 450 TAAVTATGDVYMW 462
+ A T T D+Y W
Sbjct: 317 SVAWTDT-DIYSW 328
Score = 57 (25.1 bits), Expect = 3.6e-16, Sum P(5) = 3.6e-16
Identities = 21/87 (24%), Positives = 42/87 (48%)
Query: 521 NDLE-EFYEDFMFNDESNNMPSAID-KDDSGVRLAPSLKSLCENVAAQCLVEPRNALQLL 578
+DL+ E ++D +D N + + + + L LKS+ + + L + L+
Sbjct: 822 SDLKVELFDDLKESDFHNWLETMFEILSIADELLFLELKSIAQQSLLRFL-NLKTLPTLM 880
Query: 579 EISDSLGADDLKKHCEDIAIRNLDYIL 605
++S S A++L C D A N+++ L
Sbjct: 881 DLSLSYHAEELYSRCIDYACHNIEFFL 907
Score = 51 (23.0 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 25/104 (24%), Positives = 42/104 (40%)
Query: 372 ERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW-----ASSDPD 426
ERV + +N +S ++ F R ++ + A HS LT++ + + A
Sbjct: 174 ERVFLLKNQTESPTSGQLFSRD---KILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIG 230
Query: 427 LRCQQLYSMC---G--RNVVSISAGKYWTAAVTATGDVYMWDGK 465
Y+ G V+ IS + A+T G +Y W GK
Sbjct: 231 FNTDVQYNFIPIPGIIHKVIQISVSHTHSLALTKFGSIYSW-GK 273
Score = 42 (19.8 bits), Expect = 3.6e-16, Sum P(5) = 3.6e-16
Identities = 30/139 (21%), Positives = 52/139 (37%)
Query: 900 WGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRS---EGKVLLSSFMTSKP 956
W G + K + L E+ S+Q + N+ DP E KVL + +
Sbjct: 915 WDGFHLKKVAQRLTELLSDQRVHLPSSKIANRLLIRDPVLMEKRNYELKVLREYLFSQES 974
Query: 957 IPVVSARAQQATDGDKSTPPWAA---SGTPPSLSRPSLRN---IQMQQGKQHCLSHSPKT 1010
+ ++ D+ A SG PS ++ N + + K + ++ + T
Sbjct: 975 SQLWDDSPYRSIFEDRRCSTSAVILESGIVPSSNQSDSLNKEDAEEKSPKPNVVNVTSIT 1034
Query: 1011 RTAGFSIAPSQGSPSDSPG 1029
+TAG S+ S S G
Sbjct: 1035 KTAGASVEIQNNIESASSG 1053
Score = 40 (19.1 bits), Expect = 3.6e-16, Sum P(5) = 3.6e-16
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 439 NVVSISAGKYWTAAVTATGDVYMWDGK 465
NV + A + A +T G+VY +D K
Sbjct: 410 NVRKLLASENKLAVLTELGEVYEFDMK 436
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 191 (72.3 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 65/210 (30%), Positives = 98/210 (46%)
Query: 130 KSRTPV-DLLSGPVLQVVGSGYNSVATE---VFSWGSGANYQLGTG-NAHLQKLPCKVDS 184
K R+P D L P + V + S +TE V + G G QLG G N +K P V
Sbjct: 8 KRRSPPEDAL--PKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVPI 65
Query: 185 LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
V A H+V ++ G+VY++G G LG D + + + P +V
Sbjct: 66 PEDIV--QAEAGGMHTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVEL-- 117
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE--GQLGYTS-VDTQPTPRRVSSLKLKII 301
+V ++A HT TE G VF WGS R+ G +G + P +V L + ++
Sbjct: 118 -QEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LSMPVV 175
Query: 302 AVAAANKHTAVVSESGEVFTWGCNREGQLG 331
VA+ N H +++ GE++T G +GQLG
Sbjct: 176 KVASGNDHLVMLTADGELYTLGSGEQGQLG 205
Score = 184 (69.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 60/178 (33%), Positives = 86/178 (48%)
Query: 258 HTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
H +TE G V T G GQLG +V + P V + I+ A HT +S+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVP-IPEDIVQAEAGGMHTVCLSKS 85
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIV 376
G+V+++GCN EG LG TS S P VE L+ K +V V+A HT L DG RV +
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEK-VVQVSAGDSHTAALTEDG-RVFL 142
Query: 377 ARNLKKSGST-----PLK-----FHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD 424
+ + + P+K ++ + VV +A+G H LT DG L+ S +
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGELYTLGSGE 200
Score = 175 (66.7 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 72/267 (26%), Positives = 117/267 (43%)
Query: 130 KSRTPVDL-LSGPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGT---------GNAHL 175
KS PV + LS PV++V G+ + + T E+++ GSG QLG G L
Sbjct: 161 KSMVPVQVQLSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGL 220
Query: 176 QKL--P-C---KVDSLHGFV-IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIH 228
++L P C K G V + + + A++S G VY +G +LG P
Sbjct: 221 ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTP----- 275
Query: 229 SGQAAVITPRRVTSGLGSRRVKT-IAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDT 286
G + P+ +TS S + + +HHTV G ++ G G+LG +
Sbjct: 276 -GTESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEE 334
Query: 287 QPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVV 346
+ P +S L + +VA V++ G VF WG QLG G A +
Sbjct: 335 KSVPTLISRLPA-VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTG 393
Query: 347 ESLKGKDLVGVAAAKYHTIVLGADGER 373
+ L+ + ++ V++ HT++L D E+
Sbjct: 394 KQLENRMVLSVSSGGQHTVLLVKDKEQ 420
Score = 89 (36.4 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKG--KDLVGVAAAKYHTIVL 367
T +S G V+ +G + QLG T + S + P+ + S K K V + ++HT+ +
Sbjct: 252 TFAISSEGHVYGFGLSNYHQLG--TPGTESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCM 309
Query: 368 GADGERVIVAR-NLKKSGSTPLKFHRKI-----KLHVVS-IAAGMVHSTALTEDGALFYW 420
++G + R + G + + +L VS +A G A+T+DG +F W
Sbjct: 310 DSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSSVACGASVGYAVTKDGRVFAW 369
Score = 51 (23.0 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 31/112 (27%), Positives = 46/112 (41%)
Query: 356 GVAAAKYHTIVLGADG-ERVIVARNL---KKSGSTPLKFHRKIKLHVVSI-AAGMVHSTA 410
G + YH LG G E V +NL K S + ++F + H V + + G +S
Sbjct: 263 GFGLSNYHQ--LGTPGTESCFVPQNLTSFKNSTKSWVRFSGG-QHHTVCMDSEGRAYSLG 319
Query: 411 LTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
E G L ++ + L S V S++ G AVT G V+ W
Sbjct: 320 RAEYGRLGLGEGAE-EKSVPTLISRLPA-VSSVACGASVGYAVTKDGRVFAW 369
Score = 43 (20.2 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 428 RCQQLYSMCGRNVVSIS---AGKYWTAAVTATGDVY 460
+C L S R V G Y+T A+++ G VY
Sbjct: 227 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVY 262
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 243 (90.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 90/312 (28%), Positives = 139/312 (44%)
Query: 84 LAAGADPDARDGESG---WSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLLSG 140
++ + P G SG SL +G + +L AS TP L S
Sbjct: 189 ISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESN 248
Query: 141 PVLQV--VGSGYNSVAT-----EVFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKL 192
VL V + G VA EVF+WG +LG G + + P V+ L I
Sbjct: 249 VVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISR-PKLVEFLALTNIDF 307
Query: 193 ISAAKFHSVAVTSLGEVYTWGYG--RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
++ ++H+ V++ G++++WG G G LGH DI P+RV+ L +V
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGS-DISHW-----IPKRVSGPLEGLQVL 361
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKH 309
++A H+ LAT G++FT+G G LG+ + ++ P+ V SL LK + VA + H
Sbjct: 362 SVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWH 421
Query: 310 TAVVSE----------SGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAA 359
TA + E S ++FTWG + +LG+G N + P V SL + +A
Sbjct: 422 TAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHG--NKETYLLPTCVSSLIDYNFHKIAC 479
Query: 360 AKYHTIVLGADG 371
T+ L G
Sbjct: 480 GHTFTVALTTSG 491
Score = 227 (85.0 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 72/225 (32%), Positives = 107/225 (47%)
Query: 203 VTSLGEVYTWG-YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
+ SLG+VY WG G L + + V+TPR + S + V I H L
Sbjct: 207 IESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNV-VLDVHQIVCGVRHVAL 265
Query: 262 ATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKL-KIIAVAAANKHTAVVSESGEV 319
T GEVFTWG G+LG+ VD P+ V L L I VA HT VVS SG++
Sbjct: 266 VTRQGEVFTWGEEVGGRLGHGIQVDIS-RPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 324
Query: 320 FTWG--CNREGQLGYGTSNSASNYTP-RVVESLKGKDLVGVAAAKYHTIVLGADGERV-- 374
F+WG + G LG+G+ S++ P RV L+G ++ VA +H+ + A+G+
Sbjct: 325 FSWGDGIHNVGLLGHGSD--ISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTF 382
Query: 375 ------IVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTE 413
++ ++S S P + L V +A + H+ A+ E
Sbjct: 383 GDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVE 427
Score = 227 (85.0 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 75/248 (30%), Positives = 121/248 (48%)
Query: 138 LSGPV--LQVV----GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF 188
+SGP+ LQV+ G+ ++++AT ++F++G GA LG GN P +V SL+G
Sbjct: 351 VSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGL 410
Query: 189 VIKLISAAKFHSVAV--------TSLG--EVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
++ + +H+ A+ TS+ +++TWG G RLGH + + + + P
Sbjct: 411 KTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETY------LLPT 464
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL 298
V+S L IA TV T G VFT G GQLG S+ P V +
Sbjct: 465 CVSS-LIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG-NSISDGKLPCLVQDRLV 522
Query: 299 K--IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
+ +A H AV++ EVFTWG G+LG+G ++ TP +VE+L+ + +
Sbjct: 523 GEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHG--DTEDKRTPTLVEALRDRHVKS 580
Query: 357 VAAAKYHT 364
++ T
Sbjct: 581 LSCGSNFT 588
Score = 166 (63.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 55/166 (33%), Positives = 81/166 (48%)
Query: 266 GEVFTWGSNREGQLGYTSVDTQP-TPRRV-SSLKLKIIAVAAANKHTAVVSESGEVFTWG 323
GEV+T G +G +V T TPR + S++ L + + +H A+V+ GEVFTWG
Sbjct: 217 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276
Query: 324 CNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV-----IVAR 378
G+LG+G S P++VE L ++ VA +YHT V+ G+ I
Sbjct: 277 EEVGGRLGHGIQVDISR--PKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNV 334
Query: 379 NLKKSGST-----PLKFHRKIK-LHVVSIAAGMVHSTALTEDGALF 418
L GS P + ++ L V+S+A G HS T +G LF
Sbjct: 335 GLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLF 380
Score = 46 (21.3 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 889 PPPTPRSEGPAWGGAKVPKGSASLREI 915
PPP PRS P P+ S R +
Sbjct: 772 PPPPPRSSSPYARRPSPPRTSGFSRSV 798
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 247 (92.0 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 83/330 (25%), Positives = 150/330 (45%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKL--PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
E++ WGS ++ QLG G +++ P ++ ++ ++ H++ +T+ G+VY G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 214 YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
+LGH D+ + + +I P L + I H++ ++ G+V +WG
Sbjct: 66 SNDYSQLGH---DLPTKRPLLI-PE-----LQDYVIIQICCGSRHSLALSDWGQVLSWGD 116
Query: 274 NREGQLGY-TSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
N GQLG+ T + P+ V L K ++ +A N H+ ++ GE+++WG N GQLG
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176
Query: 332 YGTSNSAS--NYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN----LKKSGS 385
+ N + NY R+ +L G L +A H+ ++ G RN L +
Sbjct: 177 VNSPNDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE 235
Query: 386 TPLKFHRKIK----LHVVSIAAGMVHSTALTEDGALFYWAS----------SDPDLRCQQ 431
T + ++K L V +A G S LT +G +F + S ++ +
Sbjct: 236 TNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRM 295
Query: 432 LYSMCGRNVVSISAGKYWTAA-VTATGDVY 460
+ + G + ++ G T A V + G VY
Sbjct: 296 VMELMGSTITQVACGNRHTLALVPSRGRVY 325
Score = 239 (89.2 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 80/257 (31%), Positives = 127/257 (49%)
Query: 126 LEDCKSRTPVDLLSGP--VLQVVGSGYNSV----AT-EVFSWGSGANYQLGTGNAHLQKL 178
+ED + TP + P +Q V G+ AT +V++ GS QLG K
Sbjct: 23 IEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLP--TKR 80
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P + L +VI I HS+A++ G+V +WG G+LGH + + V P+
Sbjct: 81 PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHA-----TDKEIVQLPK 135
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVD--TQPT-PRRVSS 295
V L ++ V IA +H++ T GE+++WGSN GQLG S + T P R+++
Sbjct: 136 -VVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTT 194
Query: 296 LK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL 354
L + + A+A H+ ++S+SG VF WG N GQLG + S Y P +++L+ +
Sbjct: 195 LLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS-Y-PTQLKTLRTLGV 252
Query: 355 VGVAAAKYHTIVLGADG 371
VA ++ L +G
Sbjct: 253 RFVACGDEFSVFLTNEG 269
Score = 213 (80.0 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 83/295 (28%), Positives = 132/295 (44%)
Query: 137 LLSGPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGTGNAH-LQ--KLPCKVDSLHGFV 189
L++ V+Q+ G+ ++ T E++SWGS QLG + + L P ++ +L G
Sbjct: 140 LVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIP 199
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRV 249
+ I+ HS ++ G V+ WG G+LG D S + T R LG V
Sbjct: 200 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRT----LG---V 252
Query: 250 KTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANK 308
+ +A +V T G VFT G+ GQLG+ + PR V L I VA N+
Sbjct: 253 RFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNR 312
Query: 309 HT-AVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVV----ESLKGKDLVGVAAAKYH 363
HT A+V G V+ +G GQLG T ++ S P+VV S G L+ ++
Sbjct: 313 HTLALVPSRGRVYAFGLGSSGQLG--TRSTKSLMLPQVVIGPWVSPSGSALLQSNDSQVS 370
Query: 364 TIV--LGADGERVIVARNLKKSGSTPLKFHR-KIKLHVVSIAAGMVHSTALTEDG 415
++ + + G++ IV L P F K ++++ A + A + G
Sbjct: 371 LVIRQIFSGGDQSIVTTTLFVDKVPPEDFRNYNPKSQILTLTAEVTKQCAQCKQG 425
Score = 150 (57.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 56/223 (25%), Positives = 99/223 (44%)
Query: 265 GGEVFTWGSNREGQLGYTSVDTQP--TPRRVS-SLKLKIIAVAAANKHTAVVSESGEVFT 321
G E++ WGS GQLG ++ + TP ++ + + VA ++HT ++ +G+V+
Sbjct: 4 GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYA 63
Query: 322 WGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-- 379
G N QLG+ P ++ L+ ++ + H++ L G+ + N
Sbjct: 64 CGSNDYSQLGHDLPTKR----PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC 119
Query: 380 --L-----KKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASS--------D 424
L K+ P + + VV IA G HS ALT G L+ W S+
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179
Query: 425 P-DL-RCQ---QLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
P DL C +L ++ G + +I+ G + ++ +G V+ W
Sbjct: 180 PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Score = 143 (55.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 49/174 (28%), Positives = 75/174 (43%)
Query: 126 LEDCKSRTPVDLLSGPVLQVVGSGYN-----SVATEVFSWGSGANYQLGTGNAHLQKLPC 180
L C + L G L + G N S + VF WG QLG + + P
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPT 242
Query: 181 KVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRV 240
++ +L ++ ++ SV +T+ G V+T G G G+LGH F + + PR V
Sbjct: 243 QLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH-GFSSNE-----MLPRMV 296
Query: 241 TSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV 293
+GS + +A HT+ L G V+ +G GQLG S + P+ V
Sbjct: 297 MELMGST-ITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 42 (19.8 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 511 NPQKLKLNGRNDLEEFYEDFMFN 533
N + L R + + Y DF+FN
Sbjct: 886 NEIAVTLENRQEFVDLYVDFVFN 908
Score = 38 (18.4 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 1022 GSPSDSPGMNRWFKPEAETPSSIRSIQMEE-KAMKDL 1057
G P D + + PEA + S+ Q ++ K + DL
Sbjct: 828 GKPVDLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDL 864
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 225 (84.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 78/287 (27%), Positives = 122/287 (42%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKV-DSLHGFVIKLISAAKFHSVAVTSLGEVYTW 212
A +F+WG+ + QLG G+ LP ++ D ++ I+ HS VT G+++
Sbjct: 14 AAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVC 73
Query: 213 GYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG 272
G + G+LG H+ TP + G ++ +A T++ TE G+V + G
Sbjct: 74 GLNKDGQLGLG----HTEDIPYFTPCKSLFGCP---IQQVACGWDFTIMLTENGQVLSCG 126
Query: 273 SNREGQLGYTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWG-----CNR 326
SN GQLG + P+ + K K++ +AA +H + SG VF WG C R
Sbjct: 127 SNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGR 186
Query: 327 EGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGST 386
G + P V L+ + V A H+ L GE + N +
Sbjct: 187 RLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN 246
Query: 387 PLKF---HRKIKLH------VVSIAAGMVHSTALTEDGALFYWASSD 424
F +KI+ H V +I +G H A TE G +F W +D
Sbjct: 247 EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRAD 293
Score = 222 (83.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 73/223 (32%), Positives = 106/223 (47%)
Query: 119 QSGASITLEDCKSRTPVDLLSG-PVLQVV-GSGYNSVATE---VFSWGSGANYQLGTGNA 173
Q G T ED TP L G P+ QV G + + TE V S GS + QLG +
Sbjct: 80 QLGLGHT-EDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHG 138
Query: 174 HLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG--GRLGHPDFDIHSGQ 231
+ + + LH + I+A H+VA T+ G V+ WG G GR P +
Sbjct: 139 PRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFF 198
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
A P RVT GL + + + A H+ T+ GEV+ WGSN+ GQL + P P+
Sbjct: 199 TAK-EPSRVT-GLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFL-PVPQ 255
Query: 292 RVSS---LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
++ + K+ A+ + H +E+G++FTWG GQLG
Sbjct: 256 KIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 184 (69.8 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 70/244 (28%), Positives = 107/244 (43%)
Query: 200 SVAVTSLGEVYTWG---YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
S A + ++ WG YG+ G LGH + D V+ P+++ R V+ I
Sbjct: 8 SEAAPAAAALFAWGANSYGQLG-LGHKE-D-------VLLPQQLNDFCKPRSVRRITGGG 58
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQP--TPRRVSSLKLKIIAVAAANKHTAVVS 314
H+ + T+GG++F G N++GQLG + P TP + S I VA T +++
Sbjct: 59 GHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK-SLFGCPIQQVACGWDFTIMLT 117
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG--- 371
E+G+V + G N GQLG P+ +E K K +V +AA H + A G
Sbjct: 118 ENGQVLSCGSNSFGQLGV-PHGPRRCVVPQAIELHKEK-VVCIAAGLRHAVAATASGIVF 175
Query: 372 ----ERVIVARNLKKSGSTPLKFHRKIKLHVVS--------IAAGMVHSTALTEDGALFY 419
R L + PL F K V + AG HS +LT+ G ++
Sbjct: 176 QWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYV 235
Query: 420 WASS 423
W S+
Sbjct: 236 WGSN 239
Score = 65 (27.9 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 401 IAAGMVHSTALTEDGALFYWASSDPDLRC---------QQLYSMCGRN--VVSISAGKYW 449
+ AG HS +LT+ G ++ W S+ Q++ + C +N V +I +G W
Sbjct: 217 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSG--W 274
Query: 450 T--AAVTATGDVYMW 462
T A T TG ++ W
Sbjct: 275 THLVAQTETGKMFTW 289
Score = 51 (23.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 443 ISAGKYWTAAVTATGDVYMWDGKK 466
+ AG +A++T G+VY+W K
Sbjct: 217 VLAGSDHSASLTDAGEVYVWGSNK 240
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 233 (87.1 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 74/254 (29%), Positives = 124/254 (48%)
Query: 139 SGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
SG ++ V G + + T+ + ++GSG+N LG G+ P V++L G+ + +
Sbjct: 395 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQV 454
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
+ H +A+++ GE++ WG G GGRLG + H+ P++V G + +
Sbjct: 455 ACGASHVLALSADGELFAWGRGDGGRLGLGTRESHN------CPQQVPMVPGQEAQRVVC 508
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYT--SVDTQPTPRR----------VSSLKLK-- 299
+L T G V GSNR +LG S++ +P P + + S L
Sbjct: 509 GIDCSMIL-TSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRE 567
Query: 300 -IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
++ V H+A V+ SG +T+G N+ GQLG TS+ + P V+ L+G +V VA
Sbjct: 568 TLLCVDLGTAHSAAVTASGACYTFGSNQHGQLG--TSSRRVSRAPCRVQGLEGIKMVMVA 625
Query: 359 AAKYHTIVLGADGE 372
T+ +GA+GE
Sbjct: 626 CGDAFTVAIGAEGE 639
Score = 193 (73.0 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 62/221 (28%), Positives = 96/221 (43%)
Query: 125 TLEDCKSRTPVDLLSGPVLQVVGSGYNSVAT-----EVFSWGSGANYQLGTGNAHLQKLP 179
+L D T V+ L G + V G + V E+F+WG G +LG G P
Sbjct: 433 SLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCP 492
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDI------HSG--Q 231
+V + G + + S+ +TS G V G R +LG + H +
Sbjct: 493 QQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEE 552
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
A TP ++ L + + H+ T G +T+GSN+ GQLG +S P
Sbjct: 553 ALSFTPLG-SAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPC 611
Query: 292 RVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
RV L+ +K++ VA + T + GEV++WG G+LG
Sbjct: 612 RVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLG 652
Score = 153 (58.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 86/352 (24%), Positives = 144/352 (40%)
Query: 155 TEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG- 213
+ V++WG G + L +LP V++ ++A + VT G + W
Sbjct: 318 SSVYAWGGGLSIPL--------RLPMPNTE----VVQ-VAAGRTQKAGVTRSGRLILWEA 364
Query: 214 --YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
G GG P + Q ++ R G +K +A T T+ G + T+
Sbjct: 365 PPLGTGGGTLLPGA-VELPQPQFVS--RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTF 421
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
GS G LG+ S+ P V +L +++ VA H +S GE+F WG G+L
Sbjct: 422 GSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRL 481
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKF 390
G GT S + P+ V + G++ V +++L + G RV+ GS +F
Sbjct: 482 GLGTRESHN--CPQQVPMVPGQEAQRVVCGIDCSMILTSPG-RVLAC------GSN--RF 530
Query: 391 HRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDP-D---LRCQQLYSMCGRNVVSISAG 446
+ K+ L +S+ V + E+ F S P D L C L + + ++G
Sbjct: 531 N-KLGLDCLSLEEEPVPHQQV-EEALSFTPLGSAPLDRETLLCVDLGT--AHSAAVTASG 586
Query: 447 KYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLIVGS 498
+T G + + S+ P V L GIK V+ G+ + +G+
Sbjct: 587 ACYTFGSNQHGQLGTSSRRVSRA-PCRVQGLEGIKMVM-VACGDAFTVAIGA 636
Score = 144 (55.7 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 146 VGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVA 202
+G+ +++ T +++GS + QLGT + + + PC+V L G + +++ +VA
Sbjct: 574 LGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVA 633
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFD 226
+ + GEVY+WG G GRLG D D
Sbjct: 634 IGAEGEVYSWGKGARGRLGRRDED 657
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 229 (85.7 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 69/203 (33%), Positives = 100/203 (49%)
Query: 140 GPVLQVV-GSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLH--GFVIKLI 193
GPV+Q+ G Y T+ V+S+GSG+N+ LG G + P + + G I +
Sbjct: 269 GPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRV 328
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
SA H+VA+ S G VYTWG G G LGH D + ITP+ V L + +
Sbjct: 329 SAGDEHAVALDSNGRVYTWGKGYCGALGHGD------ENDKITPQ-VLVNLNNCLAVQVC 381
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYTS---VDTQPTPRRVSSLKL-KIIAVAAANKH 309
A K T + EGG ++ +G G LG+ D PR + LK ++ V+ H
Sbjct: 382 ARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYH 441
Query: 310 TAVVSESGEVFTWGCNREGQLGY 332
T VV++ G +F +G N QLG+
Sbjct: 442 TIVVTQRGRIFGFGDNERAQLGH 464
Score = 202 (76.2 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 86/332 (25%), Positives = 145/332 (43%)
Query: 115 SVLLQSGASITLEDCKSRTPVDL-LSGPVLQVVGSGYNSV----ATEVFSWGSGANYQLG 169
S +L G+ T C + TP++ V QV + +S + +V + G +++ G
Sbjct: 139 SGVLAHGSETT--QCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCG 196
Query: 170 TGNAHLQKL-PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIH 228
+ P V++L G K ++A +V ++ G YT G G+LGH D +
Sbjct: 197 HLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGD-TLD 255
Query: 229 SGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQP 288
V+ +G V IAA + + T+ G V+++GS LG+ +
Sbjct: 256 RPVPKVV---EFLKTIGP--VVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDEL 310
Query: 289 TPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRV 345
PR + + K K I+ V+A ++H + +G V+TWG G LG+G N TP+V
Sbjct: 311 QPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDEND--KITPQV 368
Query: 346 VESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPL-------KFHRK----- 393
+ +L V V A K T VL G ++ GS K R
Sbjct: 369 LVNLNNCLAVQVCARKRKTFVLVEGG--LLYGFGWMGFGSLGFPDRGVSDKVLRPRVLEC 426
Query: 394 IKLHVVS-IAAGMVHSTALTEDGALFYWASSD 424
+K H VS ++ G+ H+ +T+ G +F + ++
Sbjct: 427 LKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNE 458
Score = 197 (74.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 62/237 (26%), Positives = 108/237 (45%)
Query: 143 LQVVGSGYNSVA---TEVFSWGSGANYQLGTGNAHLQKLP-CKVDSLHGFVIKLISAAKF 198
+Q+ Y+++ ++V+S G + L G+ Q + ++ + +SA +
Sbjct: 114 MQIATGKYHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN 173
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
HS V G+V T G GH D + P+ V + G+ K +AA H
Sbjct: 174 HSAFVLQSGQVLTCGDNSSHCCGHLDTS-----RPIFRPKLVEALKGTP-CKQVAAGLHF 227
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL--KIIAVAAANKHTAVVSES 316
TV + G +T GSN GQLG+ +P P+ V LK ++ +AA + V++
Sbjct: 228 TVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQD 287
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADG 371
G V+++G LG+G PRV+++ K K + + V+A H + L ++G
Sbjct: 288 GSVYSFGSGSNFCLGHGEQQD--ELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNG 342
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 41/147 (27%), Positives = 73/147 (49%)
Query: 142 VLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAK 197
+L+V ++VA + V++WG G LG G+ + + P + +L+ + + A K
Sbjct: 325 ILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARK 384
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
+ + G +Y +G+ G LG PD + V+ PR V L RV ++ +
Sbjct: 385 RKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSD---KVLRPR-VLECLKPHRVSQVSTGLY 440
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSV 284
HT++ T+ G +F +G N QLG+ S+
Sbjct: 441 HTIVVTQRGRIFGFGDNERAQLGHDSL 467
Score = 52 (23.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 392 RKIKLHVVSIAAGMVHSTALTEDGALFY--WASSDPDLRCQQLYSMCGRNVVSISAGKYW 449
RK K V+ + G+++ G+L + SD LR + L + V +S G Y
Sbjct: 383 RKRKTFVL-VEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYH 441
Query: 450 TAAVTATGDVY 460
T VT G ++
Sbjct: 442 TIVVTQRGRIF 452
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 233 (87.1 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 60/193 (31%), Positives = 99/193 (51%)
Query: 176 QKLPCK-VDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAV 234
Q C+ + SL + I+ HS+A+++ G+++ WG G+LG + QA
Sbjct: 102 QSTVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLG-----LRKEQAGT 156
Query: 235 ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS 294
+P+ + S L V I+A +H+ + + G VF WGSN GQLG + P V
Sbjct: 157 QSPQHLQS-LCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVK 215
Query: 295 SL-KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKD 353
SL K ++++ +HTA +S+ G VFT+G GQLG+ + + PR++ L G
Sbjct: 216 SLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD--EHHPRLIAELWGSK 273
Query: 354 LVGVAAAKYHTIV 366
+ V ++HT+V
Sbjct: 274 VSQVTCGRHHTLV 286
Score = 225 (84.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 69/230 (30%), Positives = 106/230 (46%)
Query: 112 AVASVLLQSGASITLEDCKSRTPVDLLSG-PVLQVVGSGYNSVAT----EVFSWGSGANY 166
A A +L G + ++ P+ L V+Q+ +S+A ++F WG +
Sbjct: 86 AGAVLLADDGKVLIMDQSTVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHG 145
Query: 167 QLGTGNAHL-QKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF 225
QLG + P + SL + ISA HS ++ G V+ WG G+LG D
Sbjct: 146 QLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDT 205
Query: 226 DIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVD 285
P V S G + V +I+ HT ++GG VFT+GS GQLG+ S+
Sbjct: 206 KDR------FVPTIVKSLCGKKTV-SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLK 258
Query: 286 TQPTPRRVSSL-KLKIIAVAAANKHTAVVSESGE-VFTWGCNREGQLGYG 333
+ PR ++ L K+ V HT V ES + ++++GC +GQLG G
Sbjct: 259 DEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNG 308
Score = 211 (79.3 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 48/136 (35%), Positives = 72/136 (52%)
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTS--VDTQPTPRRVSSL 296
R L +R+V IA H++ + G++F WG N GQLG TQ +P+ + SL
Sbjct: 107 RPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQ-SPQHLQSL 165
Query: 297 -KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV 355
++ + ++A H+ V+S SG VF WG N GQLG G ++ + P +V+SL GK V
Sbjct: 166 CEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLG--DTKDRFVPTIVKSLCGKKTV 223
Query: 356 GVAAAKYHTIVLGADG 371
++ HT L G
Sbjct: 224 SISCGGEHTATLSKGG 239
Score = 164 (62.8 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 49/156 (31%), Positives = 73/156 (46%)
Query: 141 PVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAA 196
PV Q+ G +S VF WGS + QLG G+ + +P V SL G IS
Sbjct: 169 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCG 228
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDF-DIHSGQAAVITPRRVTSGLGSRRVKTIAAA 255
H+ ++ G V+T+G G G+LGH D H PR + GS+ V +
Sbjct: 229 GEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHH-------PRLIAELWGSK-VSQVTCG 280
Query: 256 KHHTVLATEGGE-VFTWGSNREGQLGYTSVDTQPTP 290
+HHT++ E + ++++G +GQLG Q P
Sbjct: 281 RHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVP 316
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 245 (91.3 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 73/230 (31%), Positives = 112/230 (48%)
Query: 115 SVLLQSGASITLED----CKSRTPVDLLSGPVLQVVGSGYNSVAT----EVFSWGSGANY 166
+VLL G + L D C+ +D + V+Q+ +SVA ++F WG A+
Sbjct: 91 AVLLADGGKVLLMDKYTVCRPLKGLD--NTKVIQIACGDQHSVALSNDGQLFVWGENAHG 148
Query: 167 QLGTGNAH-LQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF 225
QLG L + P + SL G + ISA HS ++ G V+ WG G+LG D
Sbjct: 149 QLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGD- 207
Query: 226 DIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVD 285
+ V T + L ++ +I+ HT ++GG VFT+GS GQLG+ S+
Sbjct: 208 ---TTDRFVPT---IVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLK 261
Query: 286 TQPTPRRVSSL-KLKIIAVAAANKHTAV-VSESGEVFTWGCNREGQLGYG 333
+ PR V+ L K+ V HT V V+ + ++++GC +GQLG G
Sbjct: 262 DEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNG 311
Score = 244 (91.0 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 61/183 (33%), Positives = 97/183 (53%)
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
I+ HSVA+++ G+++ WG G+LG + QA + +P+ + S G V I
Sbjct: 123 IACGDQHSVALSNDGQLFVWGENAHGQLG-----LRKEQALIQSPQHLQSLCGIP-VAQI 176
Query: 253 AAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTA 311
+A +H+ + + G VF WGSN GQLG + P V SL K ++++ +HTA
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTA 236
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+S+ G VFT+G GQLG+ + + PR+V L G + V ++HT+VL A
Sbjct: 237 TLSKGGTVFTFGSGGFGQLGHNSLKD--EHHPRLVAELWGSKVSQVTCGRHHTLVLVALT 294
Query: 372 ERV 374
R+
Sbjct: 295 NRI 297
Score = 164 (62.8 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 51/156 (32%), Positives = 71/156 (45%)
Query: 141 PVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAA 196
PV Q+ G +S VF WGS + QLG G+ + +P V SL G IS
Sbjct: 172 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCG 231
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDF-DIHSGQAAVITPRRVTSGLGSRRVKTIAAA 255
H+ ++ G V+T+G G G+LGH D H PR V GS+ V +
Sbjct: 232 GEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHH-------PRLVAELWGSK-VSQVTCG 283
Query: 256 KHHT-VLATEGGEVFTWGSNREGQLGYTSVDTQPTP 290
+HHT VL ++++G +GQLG Q P
Sbjct: 284 RHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVP 319
Score = 40 (19.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 572 RNALQLLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFASASLDILADLEKSLD 628
+N L++L+++ + H DI I D+I+ S +A++D LAD + +D
Sbjct: 541 QNLLRILQMAYKVCCST---H-RDITIS--DFIIYEISDLLNAATIDDLADWDPFVD 591
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 244 (91.0 bits), Expect = 2.3e-15, Sum P(4) = 2.3e-15
Identities = 90/328 (27%), Positives = 139/328 (42%)
Query: 141 PVLQVVGSGYN-SVAT----EVFSWGSGANYQLGTGNA--HLQKLPCKVDSLHGFVIKLI 193
P + + +GYN S+A E++ WG ++QL + A + K P K+ + +K I
Sbjct: 34 PNICFMDNGYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDK-PIKIQVIPNQRVKSI 92
Query: 194 SAAKFHSVAVTSLGEVYTWG-YGRGGRLGHPDFDIHSGQAAVITPRRVTS-GLGSRRVKT 251
S S A+ G +Y WG GG+ V + VT +G
Sbjct: 93 SCGGNFSAAIMENGLLYVWGTLIEGGKCTE-------SPTKVDLLKGVTCVSIGINHCAV 145
Query: 252 IAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTA 311
+A + E V+TWG+NR+GQLG PRRV+ L K I+V + TA
Sbjct: 146 VADSP----TTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVT-LGSKAISVCCGEEFTA 200
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+ E EVF WG N+ Q+ SN++ V+ G+D+V ++ K + G
Sbjct: 201 AIVEGNEVFVWGYNKSRQI---CSNNSDEIISIPVKPFLGRDIVELSCTKNYIAARSGVG 257
Query: 372 ERVIVARNLK--KSGSTP-LKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLR 428
+ N + + G + F KIK I+A H L+E G +F W +S+ +
Sbjct: 258 NVCVWGSNEQVCRIGDDKFINFPNKIK----QISASTSHILVLSEKGEIFSWGNSEDNQL 313
Query: 429 CQQLYSMCGRNVVSISAGKYWTAAVTAT 456
+L N+ S S T T T
Sbjct: 314 SHKLDVNSSPNINSSSGTTTPTTNTTTT 341
Score = 184 (69.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 71/285 (24%), Positives = 123/285 (43%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
HS+A+T GE+Y WG R H + ++ P ++ + ++RVK+I+ +
Sbjct: 45 HSLALTETGELYGWGDNR-----HHQLSSNKAITSIDKPIKIQV-IPNQRVKSISCGGNF 98
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESG- 317
+ E G ++ WG+ EG G + +P +V LK + V+ H AVV++S
Sbjct: 99 SAAIMENGLLYVWGTLIEG--GKCT----ESPTKVDLLK-GVTCVSIGINHCAVVADSPT 151
Query: 318 -----EVFTWGCNREGQLGYGTSNSASNYTPRVVESLK------GKDLVGVAAAKYHTIV 366
V+TWG NR+GQLG +S +N RV K G++ V
Sbjct: 152 TPEKRSVYTWGTNRKGQLGV-VGDSITNAPRRVTLGSKAISVCCGEEFTAAIVEGNEVFV 210
Query: 367 LGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPD 426
G + R I + N + S P+K + +V ++ + A + G + W S++
Sbjct: 211 WGYNKSRQICSNNSDEIISIPVKPF--LGRDIVELSCTKNYIAARSGVGNVCVWGSNEQV 268
Query: 427 LRC-QQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDN 470
R + + ISA ++ G+++ W S+DN
Sbjct: 269 CRIGDDKFINFPNKIKQISASTSHILVLSEKGEIFSWGN--SEDN 311
Score = 140 (54.3 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 59/264 (22%), Positives = 111/264 (42%)
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQ-PTPRRVSSL-KLKIIAVAAANKHTAVVS 314
+H++ TE GE++ WG NR QL T P ++ + ++ +++ +A +
Sbjct: 44 NHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIM 103
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
E+G ++ WG EG G T + P V+ LKG V + H V+ AD
Sbjct: 104 ENGLLYVWGTLIEG--GKCTES------PTKVDLLKGVTCVSIGIN--HCAVV-ADSPTT 152
Query: 375 IVARNL------KKS-----GSTPLKFHRKIKL--HVVSIAAGMVHSTALTEDGALFYWA 421
R++ +K G + R++ L +S+ G + A+ E +F W
Sbjct: 153 PEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTLGSKAISVCCGEEFTAAIVEGNEVFVWG 212
Query: 422 SSDPDLRCQ----QLYSM-----CGRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDNPP 472
+ C ++ S+ GR++V +S K + AA + G+V +W +
Sbjct: 213 YNKSRQICSNNSDEIISIPVKPFLGRDIVELSCTKNYIAARSGVGNVCVWGSNEQVCRIG 272
Query: 473 LVTRLHGIKKATSVSVGETHLLIV 496
++ K +S +H+L++
Sbjct: 273 DDKFINFPNKIKQISASTSHILVL 296
Score = 49 (22.3 bits), Expect = 2.3e-15, Sum P(4) = 2.3e-15
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 427 LRCQQLYSMCGRNVVSI-SAGKYWTAAVTATGD--VYMWDGKKSKDN 470
L+ +Y + GRNV+S+ S GK + A+ G+ V + + + KDN
Sbjct: 347 LQFNNVYQLEGRNVLSVYSWGKS-SGAIIEPGNFRVDIAESMRRKDN 392
Score = 46 (21.3 bits), Expect = 2.3e-15, Sum P(4) = 2.3e-15
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 982 TPPSLSRPSLRNIQMQQGKQHCLSHSPKTRTAGFSIAPSQGSPSDSPGMNRWFKP 1036
+P +LS +L + Q QQ L+ SP S++ + S S N F P
Sbjct: 686 SPTTLSPSTLSSSQQQQSTPSSLTSSPSPSQRN-SLSTGNIANSLSLSSNALFSP 739
Score = 46 (21.3 bits), Expect = 2.3e-15, Sum P(4) = 2.3e-15
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 794 SVSEVGSNAAKDFFDTEITEVSKKKEEDAMSEGNVAIEYSKQSG------FLVQKKDNAD 847
S S + S+ + + +T + +++S GN+A S S FL KD +
Sbjct: 691 SPSTLSSSQQQQSTPSSLTSSPSPSQRNSLSTGNIANSLSLSSNALFSPNFLSSSKDG-N 749
Query: 848 SLKNN 852
++ NN
Sbjct: 750 NINNN 754
Score = 45 (20.9 bits), Expect = 3.0e-15, Sum P(4) = 3.0e-15
Identities = 34/195 (17%), Positives = 68/195 (34%)
Query: 841 QKKDNADSLKNNCSPQTTSXXXXXXXXGGLSMFLSGALDDTPKEIALPPPPTPR---SEG 897
+ +N +++ N+ + T + ++ S TP + P P+ R S G
Sbjct: 664 ENNNNNNNINNSNNNNTNNTNISPTTLSPSTLSSSQQQQSTPSSLTSSPSPSQRNSLSTG 723
Query: 898 PAWGGAKVPKG---SASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGKVLLSSFMTS 954
+ S + + + I N N + + + S S ++S
Sbjct: 724 NIANSLSLSSNALFSPNFLSSSKDGNNINNNNNNNNNNNNNNNNNNSSNSSSSSGSSLSS 783
Query: 955 KP--IPVVSARAQQATDGDKSTPPWAASGTPPSL--SRPSLRNIQMQQGKQHCLSHSPKT 1010
P P + R+ + TP S L S ++++IQ Q S++ +
Sbjct: 784 SPNLSPTIVNRSGYSLSFSGGTPSSRDSSVNNLLNTSGGAIQSIQRQFANSGSSSNNNNS 843
Query: 1011 RTAGFSIAPSQGSPS 1025
+ S+ S SP+
Sbjct: 844 NNSP-SLIGSNSSPA 857
Score = 40 (19.1 bits), Expect = 2.3e-15, Sum P(4) = 2.3e-15
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 708 LQQIEMLEVKLSNGHILDEQQIAKLQTKSVLERSLAELG 746
LQ+I ++K + + E+ +A + ++L R E+G
Sbjct: 535 LQEISYSQIKYQKQNAMGEKNLAIVFAPNILTRG--EIG 571
Score = 40 (19.1 bits), Expect = 3.7e-15, Sum P(3) = 3.7e-15
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 533 NDESNNMPSAIDKDDS 548
N+ SNN PS I + S
Sbjct: 840 NNNSNNSPSLIGSNSS 855
Score = 37 (18.1 bits), Expect = 4.7e-15, Sum P(4) = 4.7e-15
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 816 KKKEEDAMSEGNVAIEYS 833
K ++++AM E N+AI ++
Sbjct: 544 KYQKQNAMGEKNLAIVFA 561
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 225 (84.3 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 78/287 (27%), Positives = 122/287 (42%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKV-DSLHGFVIKLISAAKFHSVAVTSLGEVYTW 212
A +F+WG+ + QLG G+ LP ++ D ++ I+ HS VT G+++
Sbjct: 14 AAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVC 73
Query: 213 GYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG 272
G + G+LG H+ TP + G ++ +A T++ TE G+V + G
Sbjct: 74 GLNKDGQLGLG----HTEDIPYFTPCKSLFGCP---IQQVACGWDFTIMLTENGQVLSCG 126
Query: 273 SNREGQLGYTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWG-----CNR 326
SN GQLG + P+ + K K++ +AA +H + SG VF WG C R
Sbjct: 127 SNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGR 186
Query: 327 EGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGST 386
G + P V L+ + V A H+ L GE + N +
Sbjct: 187 RLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN 246
Query: 387 PLKF---HRKIKLH------VVSIAAGMVHSTALTEDGALFYWASSD 424
F +KI+ H V +I +G H A TE G +F W +D
Sbjct: 247 EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRAD 293
Score = 222 (83.2 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 73/223 (32%), Positives = 106/223 (47%)
Query: 119 QSGASITLEDCKSRTPVDLLSG-PVLQVV-GSGYNSVATE---VFSWGSGANYQLGTGNA 173
Q G T ED TP L G P+ QV G + + TE V S GS + QLG +
Sbjct: 80 QLGLGHT-EDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHG 138
Query: 174 HLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG--GRLGHPDFDIHSGQ 231
+ + + LH + I+A H+VA T+ G V+ WG G GR P +
Sbjct: 139 PRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFF 198
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
A P RVT GL + + + A H+ T+ GEV+ WGSN+ GQL + P P+
Sbjct: 199 TAK-EPSRVT-GLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFL-PVPQ 255
Query: 292 RVSS---LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
++ + K+ A+ + H +E+G++FTWG GQLG
Sbjct: 256 KIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 184 (69.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 70/244 (28%), Positives = 107/244 (43%)
Query: 200 SVAVTSLGEVYTWG---YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
S A + ++ WG YG+ G LGH + D V+ P+++ R V+ I
Sbjct: 8 SEAAPAAAALFAWGANSYGQLG-LGHKE-D-------VLLPQQLNDFCKPRSVRRITGGG 58
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQP--TPRRVSSLKLKIIAVAAANKHTAVVS 314
H+ + T+GG++F G N++GQLG + P TP + S I VA T +++
Sbjct: 59 GHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK-SLFGCPIQQVACGWDFTIMLT 117
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG--- 371
E+G+V + G N GQLG P+ +E K K +V +AA H + A G
Sbjct: 118 ENGQVLSCGSNSFGQLGV-PHGPRRCVVPQAIELHKEK-VVCIAAGLRHAVAATASGIVF 175
Query: 372 ----ERVIVARNLKKSGSTPLKFHRKIKLHVVS--------IAAGMVHSTALTEDGALFY 419
R L + PL F K V + AG HS +LT+ G ++
Sbjct: 176 QWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYV 235
Query: 420 WASS 423
W S+
Sbjct: 236 WGSN 239
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 56/210 (26%), Positives = 87/210 (41%)
Query: 177 KLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVIT 236
K P +V L + A HS ++T GEVY WG + G+L + +
Sbjct: 201 KEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN------EAAFLPVP 254
Query: 237 PRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG-----YTS--VDTQ-- 287
+ + +V I + H V TE G++FTWG GQLG Y ++ Q
Sbjct: 255 QKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDS 314
Query: 288 --PTPRRVSSLKLK------IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
P R +S+ V+ ++H + G ++WG N G G GT A+
Sbjct: 315 FLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTE--AN 371
Query: 340 NYTPRVVESLKGKD--LVGVAAAKYHTIVL 367
+ P+ V++L LVG A H++ L
Sbjct: 372 VWAPKPVQALLSSSGLLVGCGAG--HSLAL 399
Score = 65 (27.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 401 IAAGMVHSTALTEDGALFYWASSDPDLRC---------QQLYSMCGRN--VVSISAGKYW 449
+ AG HS +LT+ G ++ W S+ Q++ + C +N V +I +G W
Sbjct: 217 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSG--W 274
Query: 450 T--AAVTATGDVYMW 462
T A T TG ++ W
Sbjct: 275 THLVAQTETGKMFTW 289
Score = 51 (23.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 443 ISAGKYWTAAVTATGDVYMWDGKK 466
+ AG +A++T G+VY+W K
Sbjct: 217 VLAGSDHSASLTDAGEVYVWGSNK 240
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 225 (84.3 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 94/365 (25%), Positives = 148/365 (40%)
Query: 154 ATEVFSWGSGANYQLGTGNAH-LQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTW 212
A +F+WG+ + QLG G+ + D IK I+ HS VT G ++
Sbjct: 14 AAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVC 73
Query: 213 GYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG 272
G + G+LG H+ + TP + S LG ++ +A T++ TE G+V + G
Sbjct: 74 GLNKDGQLGLG----HTEEVLYFTPCK--SLLGCA-IQQVACGWDFTIILTENGQVLSCG 126
Query: 273 SNREGQLGYTSVDTQPT-PRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCN--REGQ 329
SN GQLG + P+ + L+ K++++AA +H + SG VF WG G+
Sbjct: 127 SNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGR 186
Query: 330 L---GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK---KS 383
G + P V L+ V V A H+ L GE + N S
Sbjct: 187 RLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLAS 246
Query: 384 GSTPLKFHRKIKLH------VVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCG 437
+ L ++I+ + ++ +G H A T G +F W +D Y G
Sbjct: 247 QAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRAD--------YGQLG 298
Query: 438 RNVVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETH-LLIV 496
R V + W + D + K P + L G AT +S G H L ++
Sbjct: 299 RTVETREG---WESEKQ---DPSLPGSGPQKGTPSCLPCLTG---ATEISCGSEHNLAVI 349
Query: 497 GSLYH 501
G + H
Sbjct: 350 GGVCH 354
Score = 197 (74.4 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 67/210 (31%), Positives = 100/210 (47%)
Query: 133 TPVDLLSGPVLQVVGSGYNS--VATE---VFSWGSGANYQLGTGNAHLQ-KLPCKVDSLH 186
TP L G +Q V G++ + TE V S GS + QLG + + +P ++ L
Sbjct: 93 TPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLR 152
Query: 187 GFVIKLISAAKFHSVAVTSLGEVYTWGYG--RGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
V+ I+A H++A T+ G V+ WG G GR P + A P VT GL
Sbjct: 153 EKVVS-IAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAK-EPSTVT-GL 209
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL---KII 301
+ + + A H+ T+ GE++ WGSN+ GQL + P+R+ + KI
Sbjct: 210 ENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLL-LPQRIEARCFQNEKIA 268
Query: 302 AVAAANKHTAVVSESGEVFTWGCNREGQLG 331
AV + H + +G+VFTWG GQLG
Sbjct: 269 AVWSGWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 182 (69.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 73/244 (29%), Positives = 109/244 (44%)
Query: 200 SVAVTSLGEVYTWG---YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
S AV + ++ WG YG+ G LGH + D+ S Q +++ S +K I
Sbjct: 8 SEAVPTAAALFAWGANSYGQLG-LGHKE-DVLSAQ-------QLSDFCKSGCIKRITGGG 58
Query: 257 HHTVLATEGGEVFTWGSNREGQLG--YTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVS 314
H+ + T+ G +F G N++GQLG +T TP + S L I VA T +++
Sbjct: 59 GHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCK-SLLGCAIQQVACGWDFTIILT 117
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
E+G+V + G N GQLG P+ +E L+ K +V +AA H + A G
Sbjct: 118 ENGQVLSCGSNSFGQLGV-PHGPRRCVIPQAIELLREK-VVSIAAGLRHALAATASGTVF 175
Query: 375 IVARNLKKSG-------STPLKFHRKIKLHV--------VSIAAGMVHSTALTEDGALFY 419
L SG + PL K V V + AG HS +LT+ G L+
Sbjct: 176 QWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYV 235
Query: 420 WASS 423
W S+
Sbjct: 236 WGSN 239
Score = 174 (66.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 54/176 (30%), Positives = 82/176 (46%)
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL-KLKIIA-VAAANKHTAVVS 314
H + +F WG+N GQLG + + +++S K I + H+AVV+
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVT 65
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
+ G +F G N++GQLG G + +TP +SL G + VA TI+L +G+ +
Sbjct: 66 DEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENGQVL 123
Query: 375 IVARNLKKSGSTPLKFHR-----KIKL---HVVSIAAGMVHSTALTEDGALFYWAS 422
N P R I+L VVSIAAG+ H+ A T G +F W +
Sbjct: 124 SCGSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGT 179
Score = 143 (55.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 65/251 (25%), Positives = 103/251 (41%)
Query: 129 CKSRTPVDLLSGPVLQVV-GSGYNSVATE---VFSWGSG---ANYQLGTGNAH----LQK 177
C ++LL V+ + G + AT VF WG+G + +L G K
Sbjct: 142 CVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAK 201
Query: 178 LPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITP 237
P V L + A HS ++T GE+Y WG + G+L S A ++ P
Sbjct: 202 EPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-------SQAAFLLLP 254
Query: 238 RRVTSG-LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQ--------- 287
+R+ + + ++ + + H V T G+VFTWG GQLG T V+T+
Sbjct: 255 QRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRT-VETREGWESEKQD 313
Query: 288 PT-----PRRVSSLKLKIIAVA---AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
P+ P++ + L + A + + G +WG N G G GT A
Sbjct: 314 PSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVIGGVCHSWGWNEHGMCGDGTE--AD 371
Query: 340 NYTPRVVESLK 350
+ P+ V L+
Sbjct: 372 VWAPKPVPGLR 382
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 204 (76.9 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+V S GS + QLG + + + + LH + I+A H+VA T+ G V+ WG G
Sbjct: 7 QVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG 66
Query: 216 RG--GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GR P + A P RVT GL + + + A H+ T+ GEV+ WGS
Sbjct: 67 LASCGRRLCPGQTLPLFFTAK-EPSRVT-GLENSKAMCVLAGSDHSASLTDAGEVYVWGS 124
Query: 274 NREGQLGYTSVDTQPTPRRVSS---LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
N+ GQL + P P+++ + K+ A+ + H +E+G++FTWG GQL
Sbjct: 125 NKHGQLANEAAFL-PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQL 183
Query: 331 G 331
G
Sbjct: 184 G 184
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 47/136 (34%), Positives = 69/136 (50%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
+T G+V + G G+LG P H + V+ P+ + L +V IAA H V A
Sbjct: 2 LTENGQVLSCGSNSFGQLGVP----HGPRRCVV-PQAIE--LHKEKVVCIAAGLRHAVAA 54
Query: 263 TEGGEVFTWGSNREG---QL--GYTS--VDTQPTPRRVSSLK-LKIIAVAAANKHTAVVS 314
T G VF WG+ +L G T T P RV+ L+ K + V A + H+A ++
Sbjct: 55 TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 315 ESGEVFTWGCNREGQL 330
++GEV+ WG N+ GQL
Sbjct: 115 DAGEVYVWGSNKHGQL 130
Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 51/179 (28%), Positives = 74/179 (41%)
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSESGEV 319
+ TE G+V + GSN GQLG + P+ + K K++ +AA +H + SG V
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 320 FTWG-----CNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
F WG C R G + P V L+ + V A H+ L GE
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 375 IVARNLKKSGSTPLKF---HRKIKLH------VVSIAAGMVHSTALTEDGALFYWASSD 424
+ N + F +KI+ H V +I +G H A TE G +F W +D
Sbjct: 121 VWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRAD 179
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 198 (74.8 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 64/210 (30%), Positives = 103/210 (49%)
Query: 130 KSRTP-VDLLSGPVLQVVGSGYNSVATE---VFSWGSGANYQLGTG-NAHLQKLPCKVDS 184
K R+P D + P + V + S +TE V + G G QLG G N +K P V S
Sbjct: 8 KRRSPPADAI--PKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV-S 64
Query: 185 LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
+ V++ A H+V ++ G+VY++G G LG D + + + P +V
Sbjct: 65 IPEDVVQA-EAGGMHTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVEL-- 117
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE--GQLGYTS-VDTQPTPRRVSSLKLKII 301
+V ++A HT T+ G VF WGS R+ G +G + P +V L + ++
Sbjct: 118 -QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDVPVV 175
Query: 302 AVAAANKHTAVVSESGEVFTWGCNREGQLG 331
VA+ N H +++ G+++T GC +GQLG
Sbjct: 176 KVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 182 (69.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 59/172 (34%), Positives = 85/172 (49%)
Query: 258 HTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
H +TE G V T G GQLG +V + P VS + ++ A HT +S+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSKS 85
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIV 376
G+V+++GCN EG LG TS S P VE L+ K +V V+A HT L DG RV +
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEK-VVQVSAGDSHTAALTDDG-RVFL 142
Query: 377 ARNLKKSGST-----PLK-----FHRKIKLHVVSIAAGMVHSTALTEDGALF 418
+ + + P+K ++ + VV +A+G H LT DG L+
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLY 194
Score = 40 (19.1 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 428 RCQQLYSMCGRNVVSIS---AGKYWTAAVTATGDVY 460
+C L S R V G Y+T A++ G VY
Sbjct: 227 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY 262
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 224 (83.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 60/186 (32%), Positives = 96/186 (51%)
Query: 187 GFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGS 246
G +K I+ HS +T G + T+G+G G+ G D ++P V+S LG
Sbjct: 310 GSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDE------LSPTCVSSLLGI 363
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT-PRRVSSLKLKII---A 302
R ++ +AA HT A+ G+V+ +G N+ GQLG T D T P+ + + L+ +
Sbjct: 364 R-IEEVAAGLWHTTCASSDGDVYAFGGNQFGQLG-TGCDQAETLPKLLEAPNLENVNVKT 421
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKY 362
++ +HTAV+++ G VF WG N+ GQLG G + P V +K +A +
Sbjct: 422 ISCGARHTAVITDEGRVFCWGWNKYGQLGIG--DVIDRNAPAEVR-IKDCFPKNIACGWW 478
Query: 363 HTIVLG 368
HT++LG
Sbjct: 479 HTLLLG 484
Score = 169 (64.5 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 47/150 (31%), Positives = 73/150 (48%)
Query: 147 GSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
G +++V T+ + ++G G Q G G+ + P V SL G I+ ++A +H+
Sbjct: 319 GGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCA 378
Query: 204 TSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLAT 263
+S G+VY +G + G+LG QA + L + VKTI+ HT + T
Sbjct: 379 SSDGDVYAFGGNQFGQLG-----TGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVIT 433
Query: 264 EGGEVFTWGSNREGQLGYTSVDTQPTPRRV 293
+ G VF WG N+ GQLG V + P V
Sbjct: 434 DEGRVFCWGWNKYGQLGIGDVIDRNAPAEV 463
Score = 168 (64.2 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 90/348 (25%), Positives = 142/348 (40%)
Query: 147 GSGYNSVATE---VFSWGS----GANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFH 199
G G+ E + +WGS G +Y T H + P ++ A H
Sbjct: 72 GCGFAMATAESGKLITWGSTDDLGQSYV--TSGKH-GETPEPFPLPPEVCVQKAEAGWAH 128
Query: 200 SVAVTSLGEVYTWGYGR---GGRL-GHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAA 255
VAVT +VYTWG+ GR+ G D D + T + +S G K +
Sbjct: 129 CVAVTENQQVYTWGWRECIPTGRVFGQVDGDSCERNISFSTEQVSSSSQG----KKSSGG 184
Query: 256 KHHTVLATEGGE------VFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANK 308
V GGE + E ++D P VS ++I++VAA +
Sbjct: 185 TSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGR 244
Query: 309 HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLG 368
HT +S+ G+V+ WG EGQLG G+ R+V S + + + Y
Sbjct: 245 HTLALSDIGQVWGWGYGGEGQLGLGSR-------VRLVSS--PHPIPCIEPSSY------ 289
Query: 369 ADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGAL--FYWA----- 421
G+ N+ S+ ++ R + +V IA G HS +T+ GAL F W
Sbjct: 290 --GKATSSGVNM----SSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQC 343
Query: 422 ---SSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK 466
S+D +L + S+ G + ++AG + T ++ GDVY + G +
Sbjct: 344 GQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQ 391
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/131 (34%), Positives = 71/131 (54%)
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIA 302
LGS VK IA H+ + T+ G + T+G GQ G S D + +P VSSL ++I
Sbjct: 309 LGSY-VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEE 367
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES--LKGKDLVGVAAA 360
VAA HT S G+V+ +G N+ GQLG G + + P+++E+ L+ ++ ++
Sbjct: 368 VAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAET--LPKLLEAPNLENVNVKTISCG 425
Query: 361 KYHTIVLGADG 371
HT V+ +G
Sbjct: 426 ARHTAVITDEG 436
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 234 (87.4 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 61/193 (31%), Positives = 98/193 (50%)
Query: 176 QKLPCK-VDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAV 234
Q C+ + L + I+ HS+A+T+ G+++ WG G+LG + QA
Sbjct: 103 QSTVCRPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLG-----LRKEQAGT 157
Query: 235 ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS 294
+P+ + S G V I+A +H+ + + G VF WGSN GQLG + P V
Sbjct: 158 QSPQHLQSLCGIP-VAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVK 216
Query: 295 SLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKD 353
SL K ++++ +HTA +S+ G VFT+G GQLG+ + + PR+V L G
Sbjct: 217 SLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD--EHHPRLVAELWGSK 274
Query: 354 LVGVAAAKYHTIV 366
+ V ++HT+V
Sbjct: 275 VSQVTCGRHHTLV 287
Score = 231 (86.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 68/230 (29%), Positives = 108/230 (46%)
Query: 112 AVASVLLQSGASITLEDCKSRTPVDLLSG-PVLQVVGSGYNSVAT----EVFSWGSGANY 166
A A +L G + ++ P+ L V+Q+ +S+A ++F WG A
Sbjct: 87 AGAVLLADDGKVLVMDQSTVCRPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALG 146
Query: 167 QLGTGNAHL-QKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF 225
QLG + P + SL G + ISA HS ++ G V+ WG G+LG D
Sbjct: 147 QLGLRKEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGD- 205
Query: 226 DIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVD 285
+ + T + L ++ +I+ HT ++GG VFT+GS GQLG+ S+
Sbjct: 206 ---TTDRFIPT---IVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLK 259
Query: 286 TQPTPRRVSSL-KLKIIAVAAANKHTAVVSESG-EVFTWGCNREGQLGYG 333
+ PR V+ L K+ V HT V +S +++++GC +GQLG G
Sbjct: 260 DEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNG 309
Score = 218 (81.8 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 50/136 (36%), Positives = 72/136 (52%)
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTS--VDTQPTPRRVSSL 296
R GL +R+V IA H++ T G++F WG N GQLG TQ +P+ + SL
Sbjct: 108 RPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQ-SPQHLQSL 166
Query: 297 -KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV 355
+ + ++A H+ V+S SG VF WG N GQLG G ++ + P +V+SL GK V
Sbjct: 167 CGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLG--DTTDRFIPTIVKSLSGKKTV 224
Query: 356 GVAAAKYHTIVLGADG 371
++ HT L G
Sbjct: 225 SISCGGEHTATLSKGG 240
Score = 169 (64.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 55/173 (31%), Positives = 79/173 (45%)
Query: 127 EDCKSRTPVDL--LSG-PVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLP 179
E +++P L L G PV Q+ G +S VF WGS + QLG G+ + +P
Sbjct: 153 EQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIP 212
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF-DIHSGQAAVITPR 238
V SL G IS H+ ++ G V+T+G G G+LGH D H PR
Sbjct: 213 TIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHH-------PR 265
Query: 239 RVTSGLGSRRVKTIAAAKHHT-VLATEGGEVFTWGSNREGQLGYTSVDTQPTP 290
V GS+ V + +HHT V +++++G +GQLG Q P
Sbjct: 266 LVAELWGSK-VSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVP 317
Score = 47 (21.6 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 910 ASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGKV---LLSSFMTSK 955
A+ E+ S++ +N+ N+ + ED F +E V +S F+T K
Sbjct: 585 ATSAEVLWMASRLPINEELHNRMKLEDYYFKTAEILVKFPFVSDFLTKK 633
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 222 (83.2 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 105/384 (27%), Positives = 165/384 (42%)
Query: 145 VVGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKL------PCKVDSLHGFVIKLISA 195
VV + S + E V S+G G LG ++ + + P V +L I ISA
Sbjct: 31 VVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSD-ISSISA 89
Query: 196 AKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAA 255
+HS+AVTS GE++ WG G+LG D S + + P+RV GL + V+ A+
Sbjct: 90 GHYHSLAVTSSGEIWAWGRNDEGQLGRIVID--SSRDSRSEPKRV-EGLENVNVQAAFAS 146
Query: 256 KHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVV 313
+ + G ++ WG ++ GQLG + P RV +L + ++ V+ H +
Sbjct: 147 GVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALAL 206
Query: 314 SESGEVFTWGCNREGQLG-YGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
+ G+VF WG +G++G G AS S+KG G + L A +
Sbjct: 207 TVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAG-------DLNLEAAEK 259
Query: 373 RVIVARNLKKSGSTPLKFH-----RKIKLHVVSIAAGMVHSTALTEDGALFYWASSD-PD 426
+V+ A + K P+ + V IA G HS L DG L S+
Sbjct: 260 KVVEA--MSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQ 317
Query: 427 L-RCQQLYSMCGRNV----VSISAGKYWTAAVTATGD--VYMWDGKKSKD----NPPLVT 475
L R +Q M ++ +SI+AG + A+ G+ + W +S+ P +
Sbjct: 318 LGRSKQDLGMKPVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENLP 377
Query: 476 R-LHGI--KKATSVSVGETHLLIV 496
R + G + SVS G H L V
Sbjct: 378 REVEGFDGESPASVSAGRVHSLCV 401
Score = 183 (69.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 82/365 (22%), Positives = 149/365 (40%)
Query: 128 DCKSRTPVDLLSGPVLQVVGSGYNSVAT----EVFSWGSGANYQLGT----GNAHLQKLP 179
D T V L + + Y+S+A E+++WG QLG + + P
Sbjct: 70 DAYEPTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEP 129
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRR 239
+V+ L ++ A+ S A+ G ++ WG + G+LG + +G P R
Sbjct: 130 KRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLG-----LGNGIIEARVPSR 184
Query: 240 VTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK 299
V + L + V ++ H + T G+VF WG +G++G + + +SL L
Sbjct: 185 VEN-LAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLE------ASL-LD 236
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS-NYTPRVVESLKGKDLVGVA 358
I + H A +G++ ++ N + P +VE + + +A
Sbjct: 237 SITDGSMKGHHA----AGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIA 292
Query: 359 AAKYHTIVLGADGERVIVARNLK-KSGSTPLKFHRK---IKLHVVSIAAGMVHSTALTED 414
H+++L DG + N+ + G + K I +SIAAG+ HS A+
Sbjct: 293 CGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITESPISIAAGLGHSLAICNR 352
Query: 415 GA--LFYWA--------SSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWD- 463
G + W P+ +++ G + S+SAG+ + VT G+ ++W
Sbjct: 353 GERNILSWGWNRSRQLGRGKPENLPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGC 412
Query: 464 GKKSK 468
GK +
Sbjct: 413 GKNGR 417
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 54/196 (27%), Positives = 89/196 (45%)
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVI-TP 237
PC V+ + I+ HS+ + G + + G G+LG D+ + +P
Sbjct: 277 PCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITESP 336
Query: 238 RRVTSGLGSRRVKTIAAAKHHTVLATEGGE--VFTWGSNREGQLGYTSVDTQPTPRRVSS 295
+ +GLG H++ GE + +WG NR QLG + PR V
Sbjct: 337 ISIAAGLG------------HSLAICNRGERNILSWGWNRSRQLGRGKPEN--LPREVEG 382
Query: 296 LKLKIIA-VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL 354
+ A V+A H+ V+E GE + WGC + G+LG G+S+ P ++E ++G L
Sbjct: 383 FDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPE--PMLLEDVEGCVL 440
Query: 355 VGVAAAKYHTIVLGAD 370
VA H+++L A+
Sbjct: 441 QAVAGFD-HSLILVAE 455
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 33/93 (35%), Positives = 46/93 (49%)
Query: 134 PVDLLSGPVLQVVGSGY-----NSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGF 188
PVD+ P+ G G+ N + SWG + QLG G + LP +V+ G
Sbjct: 329 PVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKP--ENLPREVEGFDGE 386
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
+SA + HS+ VT GE + WG G+ GRLG
Sbjct: 387 SPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLG 419
Score = 140 (54.3 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 43/159 (27%), Positives = 73/159 (45%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGE--VYTWGY 214
+ S GS QLG L P VD + I+A HS+A+ + GE + +WG+
Sbjct: 307 LLSAGSNIYGQLGRSKQDLGMKP--VDITESPIS--IAAGLGHSLAICNRGERNILSWGW 362
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
R +LG G+ + PR V G +++A + H++ TE GE + WG
Sbjct: 363 NRSRQLGR-------GKPENL-PREV-EGFDGESPASVSAGRVHSLCVTEKGEAWVWGCG 413
Query: 275 REGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVV 313
+ G+LG S +P P + ++ ++ A H+ ++
Sbjct: 414 KNGRLGLGSSSDEPEPMLLEDVEGCVLQAVAGFDHSLIL 452
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 238 (88.8 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 59/175 (33%), Positives = 93/175 (53%)
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
I+ HS+A+T+ G+++ WG G+LG + QA +PR + S G V I
Sbjct: 123 IACGDQHSMALTNDGQLFVWGENALGQLG-----LRKEQAGTQSPRHLQSLCGIP-VAQI 176
Query: 253 AAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTA 311
+A +H+ + + G VF WG N GQLG + P V+SLK K I++++ +HTA
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTA 236
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
+++ G VFT+G GQLG+ + + PR+V L G + V + HT+V
Sbjct: 237 ALAKGGTVFTFGSGGFGQLGHNSFKD--EHHPRLVAELWGSKVSQVTCGRNHTLV 289
Score = 234 (87.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 71/228 (31%), Positives = 110/228 (48%)
Query: 115 SVLLQSGASITLEDCKSR-TPVDLLSG-PVLQVVGSGYNSVAT----EVFSWGSGANYQL 168
+VLL G + + D + +P+ L V+Q+ +S+A ++F WG A QL
Sbjct: 91 AVLLDDGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQL 150
Query: 169 GTGNAHL-QKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDI 227
G + P + SL G + ISA HS ++ G V+ WG G+LG D
Sbjct: 151 GLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGD--- 207
Query: 228 HSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQ 287
+ V T V + L +++ +I+ HT +GG VFT+GS GQLG+ S +
Sbjct: 208 -TTDRFVPT---VVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDE 263
Query: 288 PTPRRVSSL-KLKIIAVAAANKHTAVVSESGE-VFTWGCNREGQLGYG 333
PR V+ L K+ V HT V + S + ++++GC +GQLG G
Sbjct: 264 HHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNG 311
Score = 219 (82.2 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 51/132 (38%), Positives = 71/132 (53%)
Query: 243 GLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTS--VDTQPTPRRVSSL-KLK 299
GL +R+V IA H++ T G++F WG N GQLG TQ +PR + SL +
Sbjct: 114 GLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQ-SPRHLQSLCGIP 172
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAA 359
+ ++A H+ V+S SG VF WG N GQLG G ++ + P VV SLK K +V ++
Sbjct: 173 VAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLG--DTTDRFVPTVVNSLKRKKIVSISC 230
Query: 360 AKYHTIVLGADG 371
HT L G
Sbjct: 231 GGEHTAALAKGG 242
Score = 167 (63.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 55/173 (31%), Positives = 83/173 (47%)
Query: 127 EDCKSRTPVDL--LSG-PVLQVVGSGYNSVATE----VFSWGSGANYQLGTGNAHLQKLP 179
E +++P L L G PV Q+ G +S VF WG + QLG G+ + +P
Sbjct: 155 EQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVP 214
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF-DIHSGQAAVITPR 238
V+SL I IS H+ A+ G V+T+G G G+LGH F D H PR
Sbjct: 215 TVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHH-------PR 267
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGE-VFTWGSNREGQLGYTSVDTQPTP 290
V GS+ V + ++HT+++T + ++++G +GQLG Q P
Sbjct: 268 LVAELWGSK-VSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVP 319
Score = 42 (19.8 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 1052 KAMKDLKRFYSS 1063
KA+KDLK+ +SS
Sbjct: 383 KAIKDLKKVFSS 394
Score = 40 (19.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 30/109 (27%), Positives = 47/109 (43%)
Query: 530 FMFNDESNNM--PSAIDKDDSGVRLAPSLKSLCENVAAQCLVEPRNAL--QLLEISDSLG 585
FM+ND + P+ + + L L L N ++ + AL +LL I SL
Sbjct: 712 FMYNDNETMIWFPAKLTVEKKKYFLFGILCGLAFNNSSVVNLPFPLALFKKLLNIKPSL- 770
Query: 586 ADDLKKHCEDIAIRNLDYILTVSSHSFASASLDILADLEKS-LDLRSSE 633
+D + + R+L YIL S+ +SL + S LDL +E
Sbjct: 771 -EDFIEF-NPVHGRSLQYILEYSNDVLEESSLPLTIIWSGSELDLDPAE 817
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 216 (81.1 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 70/226 (30%), Positives = 109/226 (48%)
Query: 129 CKSRTPVDLLSGPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQ-KLPCKVD 183
CKS LL P+ QV G + + T +V S GS + QLG + + +P ++
Sbjct: 95 CKS-----LLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE 149
Query: 184 SLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG--RGGRLGHPDFDIHSGQAAVITPRRVT 241
V+ I+A H++A T+ G V+ WG G GR P + A P +VT
Sbjct: 150 VQREKVVS-IAAGLRHALAATASGLVFQWGTGLASSGRRLCPGQTLPLFLTAK-EPSKVT 207
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKL--- 298
GL + + + A H+ T+ GE++ WGSN+ GQL + P P+++ + +
Sbjct: 208 VGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLA-SQAAFLPLPQKIEAHRFQNE 266
Query: 299 KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPR 344
K+ AV + H +E+G+VFTWG GQLG T S + P+
Sbjct: 267 KVAAVWSGWTHLVAQTETGKVFTWGRADYGQLGR-TLESPEGWKPK 311
Score = 213 (80.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 78/288 (27%), Positives = 126/288 (43%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSL-HGFVIKLISAAKFHSVAVTSLGEVYTW 212
AT +F+WG+ + QLG G+ LP ++ +K I+ HS VT G ++
Sbjct: 14 ATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVC 73
Query: 213 GYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG 272
G + G+LG H+ T + S LG ++ +A T++ T+ G+V + G
Sbjct: 74 GLNKDGQLGLG----HTEDVLYFTLCK--SLLGCP-IQQVACGWDFTIILTKNGQVLSCG 126
Query: 273 SNREGQLGYTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCN--REGQ 329
SN GQLG + P+ + + K++++AA +H + SG VF WG G+
Sbjct: 127 SNSFGQLGVPHGPRRCVVPQAIEVQREKVVSIAAGLRHALAATASGLVFQWGTGLASSGR 186
Query: 330 -LGYGTSNS---ASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK---K 382
L G + + +V L+ V V A H+ L GE + N
Sbjct: 187 RLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLA 246
Query: 383 SGSTPLKFHRKIKLH------VVSIAAGMVHSTALTEDGALFYWASSD 424
S + L +KI+ H V ++ +G H A TE G +F W +D
Sbjct: 247 SQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRAD 294
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 209 (78.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 71/231 (30%), Positives = 108/231 (46%)
Query: 159 SWGSGANYQLGTG-NAHLQKLPCKVDSLHGFV------IKL--ISAAKFHSVAVTSLGEV 209
+WG QLG G + P +++ F+ +K+ +S ++H+ A++ GEV
Sbjct: 189 AWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEV 248
Query: 210 YTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVF 269
YTWG G G+LGH + SG +I PRRV GL +K +A HT + G ++
Sbjct: 249 YTWGLGSMGQLGH--VSLQSGDKELI-PRRVV-GLDGVSMKEVACGGVHTCALSLEGALY 304
Query: 270 TWGSNREGQLG-------YTSVD--TQPTPRRVSSLKLK--IIAVAAANKHTAVVSESGE 318
WG + GQLG + SV ++ R V L + + VA + HT V G
Sbjct: 305 AWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGR 364
Query: 319 VFTWGCNREGQLGYGTSNSASNYT--PRVVESLKGKDLVGVAAAKYHTIVL 367
+ WG N GQ +N S+Y P V+ G+ + +AA H+ VL
Sbjct: 365 ICGWGYNSYGQ----AANEKSSYAWYPSPVDWCVGQ-VRKLAAGGGHSAVL 410
Score = 209 (78.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 67/242 (27%), Positives = 106/242 (43%)
Query: 152 SVATE--VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVT----- 204
+VA++ +F+WG+ QLG G +K P KV L +K +S F + A+
Sbjct: 75 AVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPREN 134
Query: 205 ----SLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV 260
S ++ WG +G L + SG T ++ ++ H V
Sbjct: 135 DGTLSTSRLWVWGQNQGSNLPR----LFSGAFPATTA-----------IRQVSCGTAHVV 179
Query: 261 LATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLK---------LKIIAVAAANKHT 310
+E G + WG N +GQLG + + PR +++ +KI+ ++ HT
Sbjct: 180 ALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHT 239
Query: 311 AVVSESGEVFTWGCNREGQLGYGTSNSASN-YTPRVVESLKGKDLVGVAAAKYHTIVLGA 369
A +S++GEV+TWG GQLG+ + S PR V L G + VA HT L
Sbjct: 240 AALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSL 299
Query: 370 DG 371
+G
Sbjct: 300 EG 301
Score = 157 (60.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 49/175 (28%), Positives = 83/175 (47%)
Query: 152 SVATEVFSWGSGANYQLG-----TGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
S A EV++WG G+ QLG +G+ L +P +V L G +K ++ H+ A++
Sbjct: 243 SDAGEVYTWGLGSMGQLGHVSLQSGDKEL--IPRRVVGLDGVSMKEVACGGVHTCALSLE 300
Query: 207 GEVYTWGYGRGGRLG-HPD----FDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
G +Y WG G+ G+LG P F + +G ++ R V + V+ +A HT++
Sbjct: 301 GALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLL--RNVPVLVIPTDVRLVACGHSHTLV 358
Query: 262 ATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
G + WG N GQ P V ++ +AA H+AV++++
Sbjct: 359 YMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGHSAVLTDA 413
Score = 151 (58.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 68/256 (26%), Positives = 102/256 (39%)
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
IS + H+ AV S G ++ WG G+LG G+ P++V L S VK +
Sbjct: 66 ISCGREHTAAVASDGSLFAWGANEYGQLGD---GTEVGRKH---PKKVKQ-LQSEFVKFV 118
Query: 253 AAAKHHTVLATEGGE---------VFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAV 303
+ T E E ++ WG N+ L P + V
Sbjct: 119 SCGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQ-------V 171
Query: 304 AAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESL-----KGKDLVGV- 357
+ H +SE G + WG N +GQLG G + PRV+ + + +LV +
Sbjct: 172 SCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQ-APRVINAYAKFLDEAPELVKIM 230
Query: 358 --AAAKYHTIVLGADGERVI--------VARNLKKSGSTPLKFHRKIKLHVVS---IAAG 404
+ +YHT L GE + +SG L R + L VS +A G
Sbjct: 231 QLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACG 290
Query: 405 MVHSTALTEDGALFYW 420
VH+ AL+ +GAL+ W
Sbjct: 291 GVHTCALSLEGALYAW 306
Score = 132 (51.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 73/314 (23%), Positives = 128/314 (40%)
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR-RVKTIAAAKHH 258
SV++ + +Y WGY + G+ G + + + P G+ R I+ + H
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKH-TAVVSESG 317
T G +F WG+N GQLG + + P++V L+ + + + TA ++E
Sbjct: 73 TAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPR 132
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVE-SLKGKDLVG-VAAAKYHTIVLGADGERVI 375
E G +L N SN PR+ + + V+ H + L +G ++
Sbjct: 133 E--NDGTLSTSRLWVWGQNQGSNL-PRLFSGAFPATTAIRQVSCGTAHVVALSEEG--LL 187
Query: 376 VARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDL-RCQQLYS 434
A + G + R + + A ++++ A D A P+L + QL
Sbjct: 188 QAWGYNEQG----QLGRGVTCEGLQ-APRVINAYAKFLDEA--------PELVKIMQL-- 232
Query: 435 MCGR-NVVSIS-AGKYWT---AAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVG 489
CG + ++S AG+ +T ++ G V + G K P V L G+ V+ G
Sbjct: 233 SCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELI-PRRVVGLDGVSMK-EVACG 290
Query: 490 ETH---LLIVGSLY 500
H L + G+LY
Sbjct: 291 GVHTCALSLEGALY 304
Score = 60 (26.2 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 555 SLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIAIRNLD 602
SLK LCE A V NA ++ +++ +G++ L + CE + + LD
Sbjct: 415 SLKELCEFQLADS-VNLSNASEIQDVAFRMGSEALARLCERLREQLLD 461
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 179 (68.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAA 306
R + + H +L G+VF+WG R GQLG+ +++ + PR + +L+ ++A VAA
Sbjct: 159 RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAG 218
Query: 307 NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASN 340
H+ VSE+G+++ WG N GQL T N A +
Sbjct: 219 GWHSVCVSETGDIYIWGWNESGQLALPTRNLAED 252
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 52/169 (30%), Positives = 83/169 (49%)
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
+H ++ +G+VF+WG R GQLG+GT + PR++E+L+G + VAA +H++ +
Sbjct: 168 EHALLLDAAGQVFSWGGGRHGQLGHGTLEA--ELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 368 GADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFY--WASSD- 424
G+ I N +SG L R + ++A +T L EDG+ + D
Sbjct: 226 SETGDIYIWGWN--ESGQLALPT-RNLAEDGETVAR---EATELNEDGSQVKRTGGAEDG 279
Query: 425 ---PDLRCQQLYSMC----GRNVVSISAGKYWTAAVTATGDVYMWD-GK 465
P + Q ++ G + V S G TA VT TG++Y W GK
Sbjct: 280 APAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGK 328
Score = 147 (56.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
A +VFSWG G + QLG G + P +++L G V+ ++A +HSV V+ G++Y WG
Sbjct: 176 AGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG 235
Query: 214 YGRGGRLGHP 223
+ G+L P
Sbjct: 236 WNESGQLALP 245
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H++ + + G+V++WG GR G+LGH + A + PR + L + +AA H
Sbjct: 169 HALLLDAAGQVFSWGGGRHGQLGHGTLE------AELEPR-LLEALQGLVMAEVAAGGWH 221
Query: 259 TVLATEGGEVFTWGSNREGQL 279
+V +E G+++ WG N GQL
Sbjct: 222 SVCVSETGDIYIWGWNESGQL 242
Score = 121 (47.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 45/146 (30%), Positives = 68/146 (46%)
Query: 229 SGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQP 288
SGQ A+ T G +T+A + T L +G +V G +G + QP
Sbjct: 239 SGQLALPTRNLAEDG------ETVA--REATELNEDGSQVKRTGGAEDGAPA-PFIAVQP 289
Query: 289 TPRRVSSLKLKIIAVAAA--NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVV 346
P + L + AV A+ ++HTAVV+ +GE++TWG + GQLG+ + S PR V
Sbjct: 290 FPALLD-LPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDR--PRRV 346
Query: 347 ESLKGKDLV--GVAAAKYHTIVLGAD 370
E K L V ++T V +
Sbjct: 347 EYFVDKQLQVKAVTCGPWNTYVYAVE 372
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 198 (74.8 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 64/210 (30%), Positives = 103/210 (49%)
Query: 130 KSRTP-VDLLSGPVLQVVGSGYNSVATE---VFSWGSGANYQLGTG-NAHLQKLPCKVDS 184
K R+P D + P + V + S +TE V + G G QLG G N +K P V S
Sbjct: 8 KRRSPPADAI--PKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV-S 64
Query: 185 LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
+ V++ A H+V ++ G+VY++G G LG D + + + P +V
Sbjct: 65 IPEDVVQA-EAGGMHTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVEL-- 117
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE--GQLGYTS-VDTQPTPRRVSSLKLKII 301
+V ++A HT T+ G VF WGS R+ G +G + P +V L + ++
Sbjct: 118 -QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDVPVV 175
Query: 302 AVAAANKHTAVVSESGEVFTWGCNREGQLG 331
VA+ N H +++ G+++T GC +GQLG
Sbjct: 176 KVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 182 (69.1 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 59/172 (34%), Positives = 85/172 (49%)
Query: 258 HTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
H +TE G V T G GQLG +V + P VS + ++ A HT +S+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSKS 85
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIV 376
G+V+++GCN EG LG TS S P VE L+ K +V V+A HT L DG RV +
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEK-VVQVSAGDSHTAALTDDG-RVFL 142
Query: 377 ARNLKKSGST-----PLK-----FHRKIKLHVVSIAAGMVHSTALTEDGALF 418
+ + + P+K ++ + VV +A+G H LT DG L+
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLY 194
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 38/122 (31%), Positives = 57/122 (46%)
Query: 309 HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLG 368
H + +E G V T G GQLG G N P +V S+ +D+V A HT+ L
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLG-ENVMERKKPALV-SIP-EDVVQAEAGGMHTVCLS 83
Query: 369 ADGE--------RVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW 420
G+ + R+ GS + +++ VV ++AG H+ ALT+DG +F W
Sbjct: 84 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 143
Query: 421 AS 422
S
Sbjct: 144 GS 145
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 222 (83.2 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 72/254 (28%), Positives = 119/254 (46%)
Query: 139 SGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
SG ++ V G + + T+ + ++GSG+N LG GN P V++L G+ + +
Sbjct: 395 SGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQV 454
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
+ H +AV++ EV+ WG G GRLG + H+ V P + +RV I
Sbjct: 455 ACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEA----QRV--IC 508
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYTSVDT--QPTPRR----------VSSLKLK-- 299
VL T ++ GSNR +LG + + +P+P S L
Sbjct: 509 GIDSSMVL-TVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQE 567
Query: 300 -IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
++ H+A V+ SG+ +T+G N+ GQLG T++ ++ P +V L+ + VA
Sbjct: 568 PVVCADIGTAHSAAVTASGQCYTFGSNQHGQLG--TNSCRNSRVPHLVVGLRAMKVTVVA 625
Query: 359 AAKYHTIVLGADGE 372
T+ +GADGE
Sbjct: 626 CGDAFTVAIGADGE 639
Score = 176 (67.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 52/185 (28%), Positives = 78/185 (42%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
EVF+WG G N +LG G P +V + + S+ +T ++ G
Sbjct: 469 EVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSN 528
Query: 216 RGGRLG--------HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGE 267
R +LG P + +A V T + ++ L V H+ T G+
Sbjct: 529 RCNKLGLDRISSAEEPSPEDQVEEATVFTCAQ-SAPLNQEPVVCADIGTAHSAAVTASGQ 587
Query: 268 VFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNR 326
+T+GSN+ GQLG S P V L+ +K+ VA + T + GEV TWG
Sbjct: 588 CYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGA 647
Query: 327 EGQLG 331
G+LG
Sbjct: 648 RGRLG 652
Score = 158 (60.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 81/351 (23%), Positives = 135/351 (38%)
Query: 155 TEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
+ +++WGSG L +LP L+ V++ +SA + VT G + W
Sbjct: 318 SSIYTWGSGITTPL--------RLPM----LNTEVVQ-VSAGRTQKAGVTKSGRLIMWEA 364
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G G P + Q R G +K ++ T T+ G + T+GS
Sbjct: 365 PPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSG 424
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
G LG+ + P+ V +L +++ VA H VS EVF WG G+LG G
Sbjct: 425 SNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLG 484
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAA-KYHTIVLGADGERVIVARN-LKKSGSTPLKFH 391
T +E V V + ++ G D V+ N + GS
Sbjct: 485 T-----------LECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCN-- 531
Query: 392 RKIKLHVVSIAAGMVHSTALTEDGALFYWASSDP----DLRCQQLYSMCGRNVVSISAGK 447
K+ L +S A + E+ +F A S P + C + + + ++G+
Sbjct: 532 -KLGLDRISSAEEPSPEDQV-EEATVFTCAQSAPLNQEPVVCADIGT--AHSAAVTASGQ 587
Query: 448 YWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLIVGS 498
+T G + + S+ P LV L +K T V+ G+ + +G+
Sbjct: 588 CYTFGSNQHGQLGTNSCRNSRV-PHLVVGLRAMK-VTVVACGDAFTVAIGA 636
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 211 (79.3 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 79/297 (26%), Positives = 127/297 (42%)
Query: 157 VFSWGSGANYQLGTGNAHLQKL--PCKVDSLHGFVIKLISAAK--FHSVAVTSLGEVYTW 212
V+ +GSG+ +LG G + + P L + ++ A HS A++ G VYTW
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 213 GYGRGGRLGH--PDFDIHSGQAA---VI--TPRRVTSGLGSRRVKTIAAAKHHTVLATEG 265
G LG D +G ++ TP +V L RV + + + T T+
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDN 192
Query: 266 GEVFTWGSNR--EGQLGYTSVDTQPTPRRVSSLKL-KIIAVAAANKHTAVVSESGEVFTW 322
G FTWG+ R +G LGY+ D+Q + ++L +I +A H ++ +G+V+TW
Sbjct: 193 GCCFTWGTFRCSDGVLGYS--DSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTW 250
Query: 323 GCNREGQLGYGT--SNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNL 380
G ++ QLG TP + L K+++ V A YH+ + G N+
Sbjct: 251 GNGQQFQLGRRMLERRRLQGLTP---QPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNI 307
Query: 381 ----------KKSGST---PLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD 424
++ G+ P +V SI G H+ AL EDG + W D
Sbjct: 308 TRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDD 364
Score = 206 (77.6 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 75/265 (28%), Positives = 113/265 (42%)
Query: 156 EVFSWGSGANYQLGTG---NAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTW 212
+V++WG+G +QLG LQ L + +L + + A +HS A+ + G VY W
Sbjct: 246 KVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIIS--VGAGSYHSFAIDNKGRVYAW 303
Query: 213 GYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG 272
G + G D G AVIT + L VK+I +HHT+ E G V WG
Sbjct: 304 GLNITRQCGIEVEDEEEG--AVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWG 361
Query: 273 SNREGQLGY-------TSVDTQP-------TPRRVSSLKLKIIAVAAANKHTAVVSESGE 318
+ QLG T V + TP + L +I V H V+ G+
Sbjct: 362 RDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLT-NVIQVVCGTHHNLAVTSDGK 420
Query: 319 VFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL-VGVAAAK-YHTIVLGA-DGERVI 375
V++WG ++G G N P +V S K++ + VA A +I+ G +
Sbjct: 421 VYSWGSAENYEVGQG-DNDEDVAVPTLVRSKAIKEVAIRVAGAGGQFSIIAGIPNASEEP 479
Query: 376 VARNLKKSGSTPLKFHRKIKLHVVS 400
VA +K S P + +K+K S
Sbjct: 480 VANGIK---SEP-ENEKKLKTEETS 500
Score = 164 (62.8 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 55/233 (23%), Positives = 98/233 (42%)
Query: 158 FSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG 217
F+WG+ G + QK + + I ++ H +A+T+ G+VYTWG G+
Sbjct: 196 FTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQ 255
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
+LG + Q +TP+ L + + ++ A +H+ G V+ WG N
Sbjct: 256 FQLGRRMLERRRLQG--LTPQP----LALKNIISVGAGSYHSFAIDNKGRVYAWGLNITR 309
Query: 278 QLGYTSVDTQP-----TPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
Q G D + P V +L+ + ++ HT + E G V WG + QLG
Sbjct: 310 QCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLG 369
Query: 332 YGTS---------NSASNY---TPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
+ +NY TP ++ L +++ V +H + + +DG+
Sbjct: 370 IPDNALPETVVKDEKGNNYYLSTPTIIPGLT--NVIQVVCGTHHNLAVTSDGK 420
Score = 98 (39.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 261 LATEGGEVFTWGSNREGQLGY--TSVDTQPTPRR---VSSLKLKIIAVAAANKHTAVVSE 315
L TE V+ +GS +LG +D PR +S+ K+ ++ +A H+A +S
Sbjct: 66 LPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSH 125
Query: 316 SGEVFTWGCNREGQLGYGTSNSASNYTPRVVESL 349
G V+TWG N + LG T + +V L
Sbjct: 126 DGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDL 159
Score = 75 (31.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASSDP-DL--------RCQQL--YSMCGRNVVSISAG 446
+ +A G H ALT G ++ W + L R Q L + +N++S+ AG
Sbjct: 228 ICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAG 287
Query: 447 KYWTAAVTATGDVYMW 462
Y + A+ G VY W
Sbjct: 288 SYHSFAIDNKGRVYAW 303
Score = 62 (26.9 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 397 HVVSIAAGMVHSTALTEDGALFYWASSD 424
+V+ + G H+ A+T DG ++ W S++
Sbjct: 401 NVIQVVCGTHHNLAVTSDGKVYSWGSAE 428
Score = 57 (25.1 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 439 NVVSISAGKYWTAAVTATGDVYMW 462
NV+ + G + AVT+ G VY W
Sbjct: 401 NVIQVVCGTHHNLAVTSDGKVYSW 424
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 216 (81.1 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 73/282 (25%), Positives = 122/282 (43%)
Query: 155 TEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVT---SLGEVYT 211
T + WG+ + QLG G P ++ + H++A+ ++ V
Sbjct: 50 TTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARFDNVSGVRA 109
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G++G + + TP ++ G G V+ +AA H+ +A GG V+ W
Sbjct: 110 WGSNSAGQIGRDPATVPTSS----TPVKI-GGFGGA-VQQVAAGGLHS-MALAGGTVWAW 162
Query: 272 GSNREGQLGYTSVD--TQPTPRRVSSLKLKII--AVAAANKHTAVVSESGEVFTWGCNRE 327
GSN GQL + T+ PR+V + KL I A+ A H+ + S E + WG N
Sbjct: 163 GSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHS-IAYTSTEAYAWGNNAS 221
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNL------- 380
GQLG GT+ SN+ P+ V+ + ++A H + L + G N
Sbjct: 222 GQLGNGTT--LSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNG 279
Query: 381 -KKSGSTPLKFHRKIKLH-VVSIAAGMVHSTALTEDGALFYW 420
+ STP++ + + + AG HS A+ + ++ W
Sbjct: 280 TTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTW 321
Score = 214 (80.4 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 61/202 (30%), Positives = 97/202 (48%)
Query: 145 VVGSGYNSVA---TEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSV 201
+V G +S+A TE ++WG+ A+ QLG G +P KV I+ ISA H++
Sbjct: 198 IVAGGSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNL 257
Query: 202 AVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
A+ S G ++ WG G+LG+ + Q+ TP ++T G + A H+V
Sbjct: 258 ALDSTGAIWAWGSNAYGQLGN---GTTTNQS---TPVQLTLPAGVTGFIDVFAGPSHSVA 311
Query: 262 ATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV---SSLKLKIIA-VAAANKHTAVVSE-- 315
V+TWG N G L + Q +P +V S++ + V +V +
Sbjct: 312 VASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNG 371
Query: 316 SGEVFTWGCNREGQLGYGTSNS 337
SG ++ WG N GQLG GT+++
Sbjct: 372 SGGMWAWGYNGYGQLGDGTTSN 393
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 71/243 (29%), Positives = 107/243 (44%)
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
S A HS ++ + WG G+LG D + AA TP+R+ G +
Sbjct: 37 SPAYSHSAVFQNMTTLAVWGNNESGQLG----DGTTTSAA--TPKRLRLGFATYSSGFAT 90
Query: 254 AAKHHTVLAT--EGGEVFTWGSNREGQLGY--TSVDTQPTPRRVSSLKLKIIAVAAANKH 309
A H +A V WGSN GQ+G +V T TP ++ + VAA H
Sbjct: 91 GASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLH 150
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL-VGVAAAKYHTIVLG 368
+ ++ G V+ WG N GQL +SA+ + PR VE+ K + A H+I
Sbjct: 151 SMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYT 209
Query: 369 ADGERVIVARNLK-KSGS-TPLKFH--RKIKLH----VVSIAAGMVHSTALTEDGALFYW 420
+ E N + G+ T L H +K++L + I+AG H+ AL GA++ W
Sbjct: 210 ST-EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAW 268
Query: 421 ASS 423
S+
Sbjct: 269 GSN 271
Score = 129 (50.5 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 52/186 (27%), Positives = 82/186 (44%)
Query: 119 QSGASITLEDCKSRTPVDLLSGPVLQVVGSG-YNSVATE----VFSWGSGANYQLGTGNA 173
Q G TL + + V L S ++ + +G +++A + +++WGS A QLG G
Sbjct: 223 QLGNGTTLSNHMPQK-VQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTT 281
Query: 174 HLQKLPCKVD---SLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSG 230
Q P ++ + GF+ + A HSVAV S VYTWG+ G L
Sbjct: 282 TNQSTPVQLTLPAGVTGFID--VFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLS 339
Query: 231 QAAVITPRRVTSGLGSRRV-KTIAAAKHHTVLATEG-GEVFTWGSNREGQLGYTSVDTQP 288
A V R S + V + + T++ G G ++ WG N GQLG + +
Sbjct: 340 PAQV----RDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRT 395
Query: 289 TPRRVS 294
P +V+
Sbjct: 396 APVQVA 401
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 216 (81.1 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 73/282 (25%), Positives = 122/282 (43%)
Query: 155 TEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVT---SLGEVYT 211
T + WG+ + QLG G P ++ + H++A+ ++ V
Sbjct: 50 TTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARFDNVSGVRA 109
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G++G + + TP ++ G G V+ +AA H+ +A GG V+ W
Sbjct: 110 WGSNSAGQIGRDPATVPTSS----TPVKI-GGFGGA-VQQVAAGGLHS-MALAGGTVWAW 162
Query: 272 GSNREGQLGYTSVD--TQPTPRRVSSLKLKII--AVAAANKHTAVVSESGEVFTWGCNRE 327
GSN GQL + T+ PR+V + KL I A+ A H+ + S E + WG N
Sbjct: 163 GSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHS-IAYTSTEAYAWGNNAS 221
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNL------- 380
GQLG GT+ SN+ P+ V+ + ++A H + L + G N
Sbjct: 222 GQLGNGTT--LSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNG 279
Query: 381 -KKSGSTPLKFHRKIKLH-VVSIAAGMVHSTALTEDGALFYW 420
+ STP++ + + + AG HS A+ + ++ W
Sbjct: 280 TTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTW 321
Score = 214 (80.4 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 61/202 (30%), Positives = 97/202 (48%)
Query: 145 VVGSGYNSVA---TEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSV 201
+V G +S+A TE ++WG+ A+ QLG G +P KV I+ ISA H++
Sbjct: 198 IVAGGSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNL 257
Query: 202 AVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
A+ S G ++ WG G+LG+ + Q+ TP ++T G + A H+V
Sbjct: 258 ALDSTGAIWAWGSNAYGQLGN---GTTTNQS---TPVQLTLPAGVTGFIDVFAGPSHSVA 311
Query: 262 ATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV---SSLKLKIIA-VAAANKHTAVVSE-- 315
V+TWG N G L + Q +P +V S++ + V +V +
Sbjct: 312 VASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNG 371
Query: 316 SGEVFTWGCNREGQLGYGTSNS 337
SG ++ WG N GQLG GT+++
Sbjct: 372 SGGMWAWGYNGYGQLGDGTTSN 393
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 71/243 (29%), Positives = 107/243 (44%)
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
S A HS ++ + WG G+LG D + AA TP+R+ G +
Sbjct: 37 SPAYSHSAVFQNMTTLAVWGNNESGQLG----DGTTTSAA--TPKRLRLGFATYSSGFAT 90
Query: 254 AAKHHTVLAT--EGGEVFTWGSNREGQLGY--TSVDTQPTPRRVSSLKLKIIAVAAANKH 309
A H +A V WGSN GQ+G +V T TP ++ + VAA H
Sbjct: 91 GASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLH 150
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL-VGVAAAKYHTIVLG 368
+ ++ G V+ WG N GQL +SA+ + PR VE+ K + A H+I
Sbjct: 151 SMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYT 209
Query: 369 ADGERVIVARNLK-KSGS-TPLKFH--RKIKLH----VVSIAAGMVHSTALTEDGALFYW 420
+ E N + G+ T L H +K++L + I+AG H+ AL GA++ W
Sbjct: 210 ST-EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAW 268
Query: 421 ASS 423
S+
Sbjct: 269 GSN 271
Score = 129 (50.5 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 52/186 (27%), Positives = 82/186 (44%)
Query: 119 QSGASITLEDCKSRTPVDLLSGPVLQVVGSG-YNSVATE----VFSWGSGANYQLGTGNA 173
Q G TL + + V L S ++ + +G +++A + +++WGS A QLG G
Sbjct: 223 QLGNGTTLSNHMPQK-VQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTT 281
Query: 174 HLQKLPCKVD---SLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSG 230
Q P ++ + GF+ + A HSVAV S VYTWG+ G L
Sbjct: 282 TNQSTPVQLTLPAGVTGFID--VFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLS 339
Query: 231 QAAVITPRRVTSGLGSRRV-KTIAAAKHHTVLATEG-GEVFTWGSNREGQLGYTSVDTQP 288
A V R S + V + + T++ G G ++ WG N GQLG + +
Sbjct: 340 PAQV----RDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRT 395
Query: 289 TPRRVS 294
P +V+
Sbjct: 396 APVQVA 401
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 221 (82.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 72/254 (28%), Positives = 123/254 (48%)
Query: 139 SGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
SG ++ V G + + T+ + ++GSG+N LG G + P V++L G+ + +
Sbjct: 395 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQV 454
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
+ H +A+++ E++ WG G GGRLG + HS P++V G + I
Sbjct: 455 ACGASHVLALSTERELFAWGRGDGGRLGLGTRESHS------CPQQVPMPPGQEAQRVIC 508
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLG--YTSVDTQP------------TPRRVSSLKLK 299
+L T G+ GSNR +LG + S+ +P TP + L +
Sbjct: 509 GIDSSVIL-TVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQE 567
Query: 300 -IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
+++V H+A V+ SG+ +T+G N+ GQLG T+ + P V+ L+G + VA
Sbjct: 568 PLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLG--TNARRVSRAPCQVQGLQGIKIAMVA 625
Query: 359 AAKYHTIVLGADGE 372
T+ +GA+GE
Sbjct: 626 CGDAFTVAIGAEGE 639
Score = 189 (71.6 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 66/236 (27%), Positives = 104/236 (44%)
Query: 126 LEDCKSRTPVDLLSG-PVLQVV-GSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLPC 180
L D T V+ L G ++QV G+ + S E+F+WG G +LG G P
Sbjct: 434 LNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQ 493
Query: 181 KVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG--HPDFD----IHSG--QA 232
+V G + + SV +T G+ G R +LG H +H +A
Sbjct: 494 QVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEA 553
Query: 233 AVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR 292
TP ++ L + ++ H+ T G+ +T+GSN+ GQLG + P +
Sbjct: 554 LNFTPLG-SAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQ 612
Query: 293 VSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE 347
V L+ +KI VA + T + GEV++WG G+LG ++A PR V+
Sbjct: 613 VQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAA---LPRPVQ 665
Score = 158 (60.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 73/302 (24%), Positives = 116/302 (38%)
Query: 101 SLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATEVFSW 160
+LH L + A L +G +T SRT G + V++W
Sbjct: 264 NLHTDLGSVRMRRAEKPLATGPPMTPGSTGSRTTSARCRGVPRGPARPAIPPPLSSVYTW 323
Query: 161 GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG---YGRG 217
G G + L +LP L+ V++ ++A + VT G + W G G
Sbjct: 324 GGGLSAPL--------RLPM----LNTEVVQ-VAAGRTQKAGVTRSGRLILWEAPPLGAG 370
Query: 218 GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
G P + Q ++ R G +K +A T T+ G + T+GS G
Sbjct: 371 GGALLPGA-VEQQQPQFVS--RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNG 427
Query: 278 QLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSN 336
LG+ ++ P V +L +++ VA H +S E+F WG G+LG GT
Sbjct: 428 CLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRE 487
Query: 337 SASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSGSTPLKFHRKIK 395
S S P+ V G++ V +++L G+ + N K G L +
Sbjct: 488 SHS--CPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPA 545
Query: 396 LH 397
LH
Sbjct: 546 LH 547
Score = 79 (32.9 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 40/157 (25%), Positives = 66/157 (42%)
Query: 372 ERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD-----PD 426
++V A N GS PL + ++S+ G HS A+T G + + S+ +
Sbjct: 548 QQVEEALNFTPLGSAPLD-----QEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTN 602
Query: 427 LR------CQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWD-------GKKSKDNP-P 472
R CQ + + G + ++ G +T A+ A G+VY W G++ +D P
Sbjct: 603 ARRVSRAPCQ-VQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAALP 661
Query: 473 LVTRLHGIKKATSVSV----GETHLLIVGSLYHPIYP 505
+L + T SV G T L I P++P
Sbjct: 662 RPVQLDETQPYTVTSVSCCHGNTLLAIRPVTDEPVFP 698
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 210 (79.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 57/186 (30%), Positives = 87/186 (46%)
Query: 237 PRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL 296
PR + L +RR++ A H +L E G+VF+WG R GQLG+ S++ +P PR + +L
Sbjct: 88 PRALAPELRARRLELGA---EHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEAL 144
Query: 297 K-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV 355
+ L + VAA H+ VSE+G+++ WG N GQL S S + T + G +
Sbjct: 145 QGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-PSRSLAEDTKTIPREASGLNED 203
Query: 356 GVAAAKYHTIVLGADGERV-IVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTED 414
G + G DG +A P + VV + G H+ +T
Sbjct: 204 GFEVRR---TAKGEDGAPAPFIAIQ-----PFPALLDLPLGADVVKASCGSRHTAVVTGT 255
Query: 415 GALFYW 420
G L+ W
Sbjct: 256 GELYTW 261
Score = 149 (57.5 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 33/103 (32%), Positives = 52/103 (50%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
A +VFSWG G + QLG G+ + P +++L G + ++A +HSV V+ G++Y WG
Sbjct: 113 AGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWG 172
Query: 214 YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
+ G+L P + + PR SGL + AK
Sbjct: 173 WNESGQLALPSRSLAEDTKTI--PREA-SGLNEDGFEVRRTAK 212
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/102 (34%), Positives = 51/102 (50%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H++ + G+V++WG GR G+LGH + A PR + L V +AA H
Sbjct: 106 HALLLDEAGQVFSWGQGRHGQLGHGSLE------AEPEPR-LLEALQGLPVAEVAAGGWH 158
Query: 259 TVLATEGGEVFTWGSNREGQLGYTS----VDTQPTPRRVSSL 296
+V +E G+++ WG N GQL S DT+ PR S L
Sbjct: 159 SVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGL 200
Score = 108 (43.1 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 33/115 (28%), Positives = 53/115 (46%)
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-SLKLKIIAVAAANKHTAVVSESGEV 319
L +G EV +G + QP P + L ++ + ++HTAVV+ +GE+
Sbjct: 200 LNEDGFEVRRTAKGEDGAPA-PFIAIQPFPALLDLPLGADVVKASCGSRHTAVVTGTGEL 258
Query: 320 FTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV--GVAAAKYHTIVLGADGE 372
+TWG + GQLG+ + S P VE K L V+ ++T V + E
Sbjct: 259 YTWGWGKYGQLGHKDTTSLDR--PCRVEYFVDKQLQVRAVSCGPWNTYVYAVEKE 311
Score = 92 (37.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL---KLKI 300
LG+ VK ++H T + T GE++TWG + GQLG+ + P RV +L++
Sbjct: 235 LGADVVKASCGSRH-TAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQV 293
Query: 301 IAVAAA--NKHTAVVSESG 317
AV+ N + V + G
Sbjct: 294 RAVSCGPWNTYVYAVEKEG 312
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 220 (82.5 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 74/254 (29%), Positives = 121/254 (47%)
Query: 139 SGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
SG ++ V G + + T+ + ++GSG+N LG GN + P V++L G+ + +
Sbjct: 396 SGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQV 455
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
S H +AVT+ EV++WG G GRLG D H+ V P + ++RV +
Sbjct: 456 SCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLP----ADFEAQRV--LC 509
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTP------------RRVSSLKL--- 298
+++T+ ++ G+NR +LG V P + V S L
Sbjct: 510 GVDCSMIMSTQH-QILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTE 568
Query: 299 KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
KI+ + H+ V+E G+ FT+G N+ GQLG S+ S+ P V L+G + A
Sbjct: 569 KIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLG--CSHRRSSRVPYQVSGLQG--ITMAA 624
Query: 359 AAKYHTIVLGADGE 372
T+ +GA+GE
Sbjct: 625 CGDAFTLAIGAEGE 638
Score = 177 (67.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/206 (27%), Positives = 91/206 (44%)
Query: 137 LLSGPVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
LL ++QV G+ + T EVFSWG G N +LG P +V F +
Sbjct: 447 LLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQR 506
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRV-------TSGLG 245
+ S+ +++ ++ G R +LG ++ V ++ L
Sbjct: 507 VLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLN 566
Query: 246 SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAA 305
+ ++ I H+V TE G+ FT+GSN+ GQLG + + P +VS L+ I A
Sbjct: 567 TEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQ-GITMAAC 625
Query: 306 ANKHTAVVSESGEVFTWGCNREGQLG 331
+ T + GEV+TWG G+LG
Sbjct: 626 GDAFTLAIGAEGEVYTWGKGARGRLG 651
Score = 156 (60.0 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 85/349 (24%), Positives = 147/349 (42%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGR 216
V++WGSG + T P ++ L+ VI+ +S + + VT G + TW
Sbjct: 322 VYTWGSG----IST--------PLRLPMLNTEVIQ-VSLGRTQKMGVTKSGRLITWEAPS 368
Query: 217 GGRLGHPDFD--IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G G P + Q I+ R G +K+++ T T+ G + T+GS
Sbjct: 369 VGS-GEPTLPGAVEQMQPQFIS--RFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSG 425
Query: 275 REGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
G LG+ + + P+ V +L +++ V+ H V+ EVF+WG G+LG
Sbjct: 426 SNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLA 485
Query: 334 TSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSGSTPLKFHR 392
T +S + P+ V SL A + ++ G D ++ ++ + G+ +F+
Sbjct: 486 TQDSHN--CPQQV-SLP-------ADFEAQRVLCGVDCSMIMSTQHQILACGNN--RFN- 532
Query: 393 KIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQL-YSMCG--RNVVSISAGKYW 449
K+ L VS S E+ LF S P L +++ Y G +V G+ +
Sbjct: 533 KLGLDKVS-GTEEPSSFCQVEEVHLFQLVQSAP-LNTEKIVYIDIGTAHSVAVTEKGQCF 590
Query: 450 TAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLIVGS 498
T G + ++S P V+ L GI T + G+ L +G+
Sbjct: 591 TFGSNQHGQLGC-SHRRSSRVPYQVSGLQGI---TMAACGDAFTLAIGA 635
Score = 96 (38.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASSDP-DLRCQQL------YSMCGRNVVSISA-GKYW 449
+V I G HS A+TE G F + S+ L C Y + G ++++A G +
Sbjct: 570 IVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITMAACGDAF 629
Query: 450 TAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLIVGSL 499
T A+ A G+VY W GK ++ GI K V + E+H V S+
Sbjct: 630 TLAIGAEGEVYTW-GKGARGRLGRKEEDFGIPKP--VQLDESHAFTVTSV 676
Score = 95 (38.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 43/187 (22%), Positives = 77/187 (41%)
Query: 187 GFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGS 246
G + L S+ H + + S VYTWG G L P ++ + LG
Sbjct: 303 GGLSSLTSSKMMHPLPLFS---VYTWGSGISTPLRLP----------MLNTEVIQVSLG- 348
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAA 305
R + + K ++ E V + G + + Q R + + I +V+
Sbjct: 349 -RTQKMGVTKSGRLITWEAPSVGSGEPTLPGAV--EQMQPQFISRFLEGQSGVTIKSVSC 405
Query: 306 ANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTI 365
+ T +++ G + T+G G LG+G N + P++VE+L G +LV V+ H +
Sbjct: 406 GDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQ--PKIVEALLGYELVQVSCGASHVL 463
Query: 366 VLGADGE 372
+ + E
Sbjct: 464 AVTNERE 470
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 227 (85.0 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 72/253 (28%), Positives = 119/253 (47%)
Query: 126 LEDCKSRTPVDLLS-----GPV-LQVVGSGYNSVATE---VFSWGSGANYQLGTGNAHLQ 176
L DC RT L+ GP+ + GS ++ T+ ++ WG + Q+G G
Sbjct: 122 LGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNA 181
Query: 177 KLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVIT 236
P +V G + +S +HS VT G +YT+G G+LG + + +
Sbjct: 182 LTPQEVSV--GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKV---- 235
Query: 237 PRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSS 295
P++VT + R V+ +A HTV TE EV+++G + GQLG+ T + PR V
Sbjct: 236 PQQVTD-IPDRVVQ-VACGGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEH 292
Query: 296 L-KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL 354
K ++ A HTA+++++G ++T+G R G+LG G N + + P + +
Sbjct: 293 FRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHV 352
Query: 355 VGVAAAKYHTIVL 367
V H +VL
Sbjct: 353 HSVTCGGCHMLVL 365
Score = 220 (82.5 bits), Expect = 5.5e-12, Sum P(4) = 5.5e-12
Identities = 74/283 (26%), Positives = 124/283 (43%)
Query: 147 GSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
G + ++ TE +F +GS QLG G P V +L +KL + + H++
Sbjct: 44 GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVF 103
Query: 204 TSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLAT 263
TS G +Y G G+LG D + + V + G +K +AA + + T
Sbjct: 104 TSRGNLYACGGNNEGQLGLGDCNDRTSFHLV----EFFNKQGP--IKMLAAGSNTSAALT 157
Query: 264 EGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWG 323
+ G ++ WG N EGQ+G TP+ VS K ++ V+ H+A V+ G ++T+G
Sbjct: 158 QDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGK-RVFWVSCGYYHSAFVTVDGALYTFG 216
Query: 324 CNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKS 383
G+LG T A++ P+ V + + +V VA HT+ L + +
Sbjct: 217 EKDSGKLGLSTEKLANHKVPQQVTDIPDR-VVQVACGGGHTVALTENEVYSFGLGQFGQL 275
Query: 384 GSTPLKFHRKI--------KLHVVSIAAGMVHSTALTEDGALF 418
G F ++ K V A G H+ +T++G L+
Sbjct: 276 GHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLY 318
Score = 212 (79.7 bits), Expect = 3.8e-11, Sum P(4) = 3.8e-11
Identities = 77/264 (29%), Positives = 116/264 (43%)
Query: 162 SGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
SGA + G P K L V IS H+ VT G+++ +G G+LG
Sbjct: 12 SGAVFTFGKSK-FADNAPSKF-WLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLG 69
Query: 222 HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY 281
G + L S RVK A + HT++ T G ++ G N EGQLG
Sbjct: 70 -------LGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGL 122
Query: 282 TSVDTQPTPRRVSSLKLK--IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
+ + + V + I +AA + +A +++ G ++ WG N EGQ+G G ++A
Sbjct: 123 GDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNA- 181
Query: 340 NYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA-RNLKKSG-STP-LKFHR---- 392
TP+ V GK + V+ YH+ + DG ++ K G ST L H+
Sbjct: 182 -LTPQEVSV--GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQ 238
Query: 393 --KIKLHVVSIAAGMVHSTALTED 414
I VV +A G H+ ALTE+
Sbjct: 239 VTDIPDRVVQVACGGGHTVALTEN 262
Score = 190 (71.9 bits), Expect = 7.1e-09, Sum P(4) = 7.1e-09
Identities = 57/183 (31%), Positives = 88/183 (48%)
Query: 252 IAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANK-HT 310
I+ HT L TE G++F +GSN GQLG + T P V +LK + + + A + HT
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 311 AVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT-IVLGA 369
V + G ++ G N EGQLG G N +++ +VE + + + AA +T L
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAGSNTSAALTQ 158
Query: 370 DGERVIVARNL-------KKSGS-TPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWA 421
DG + N K+S + TP + + V ++ G HS +T DGAL+ +
Sbjct: 159 DGRLYMWGDNSEGQIGLGKESNALTPQEV--SVGKRVFWVSCGYYHSAFVTVDGALYTFG 216
Query: 422 SSD 424
D
Sbjct: 217 EKD 219
Score = 173 (66.0 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 64/225 (28%), Positives = 104/225 (46%)
Query: 264 EGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKI-IAVAAANKHTAVVSESGEVFTW 322
E G VFT+G ++ D P+ LK + + ++ ++HTA+V+E+G++F +
Sbjct: 11 ESGAVFTFGKSK-------FADNAPSK---FWLKNDVPLRISCGDEHTALVTENGKLFMF 60
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKK 382
G N GQLG GT + + P V++LK + + A + HT+V + G N
Sbjct: 61 GSNNWGQLGLGTKTTVNK--PTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGN--N 116
Query: 383 SGSTPL-KFHRKIKLHVVS----------IAAGMVHSTALTEDGALFYWASS-------- 423
G L + + H+V +AAG S ALT+DG L+ W +
Sbjct: 117 EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLG 176
Query: 424 -DPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKS 467
+ + Q S+ G+ V +S G Y +A VT G +Y + K S
Sbjct: 177 KESNALTPQEVSV-GKRVFWVSCGYYHSAFVTVDGALYTFGEKDS 220
Score = 52 (23.4 bits), Expect = 5.3e-14, Sum P(3) = 5.3e-14
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 507 NVAKNPQKLKLNGRNDLE-EFYEDFMFNDESNNMPSAIDKDDS 548
N + QK K +DLE E ED N+E + SA +D+S
Sbjct: 1124 NSEEEEQKSKSEATDDLESEEEEDNEDNEEEKSETSASTEDES 1166
Score = 50 (22.7 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 907 KGSASLREIQSEQSKIKVN---QPTRNKDQFEDPSFGRSEGKVLLSSFMTSKPIPVVSAR 963
K S S ++++S ++ +++ PT KD R+E + + +K +P V +
Sbjct: 737 KKSGSEKDLKSSKTTKEISTTSHPTSGKDTSAKTKKSRAEQRQVEDKLKKTKMVPTVVSE 796
Query: 964 AQQATD 969
A ++
Sbjct: 797 AASVSE 802
Score = 46 (21.3 bits), Expect = 5.3e-14, Sum P(3) = 5.3e-14
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 788 EAVSDFSVSEVGSNAAKDFFDTEITEVSKKKEEDAMSEGNVAIEYSK 834
E S+ E G N +++ D E E S + EE + SE E S+
Sbjct: 1211 EVESEAEEDETGENTSEE--DDEEQESSSEDEEKSESEAEGEEEESE 1255
Score = 41 (19.5 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 892 TPRSEGPAWGGAKVPKGSASLREIQS--EQSKIKVNQPTRNKDQFEDPSFGRSEGK 945
T RS + A G+ + +E +S E+S+ VN+ +D E G K
Sbjct: 904 TERSRSESKTDAHSEMGTYNRKEEESDEEESEGSVNERDETEDVEESDGLGNRRDK 959
Score = 39 (18.8 bits), Expect = 1.0e-12, Sum P(4) = 1.0e-12
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 808 DTEITEVSKKKEEDAMSEGN 827
D + +E S+++E SEGN
Sbjct: 1169 DEDKSETSQEEESGEESEGN 1188
Score = 39 (18.8 bits), Expect = 1.0e-12, Sum P(4) = 1.0e-12
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 914 EIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGK 945
E++SE + + + T +D E S E K
Sbjct: 1211 EVESEAEEDETGENTSEEDDEEQESSSEDEEK 1242
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 231 (86.4 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 68/233 (29%), Positives = 109/233 (46%)
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
+S HS VT ++Y +G G+LG G + I+ L +VK
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLG-------LGSKSAISKPTCVKALKPEKVKLA 92
Query: 253 AAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS--SLKLKIIAVAAANKHT 310
A ++HT+++TEGG V+ G N EGQLG + + T +S + + KI ++A + +
Sbjct: 93 ACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTS 152
Query: 311 AVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGAD 370
A ++E G +F WG N EGQ+G N ++ P+ V GK + ++ YH+ + D
Sbjct: 153 AALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTD 208
Query: 371 GERVIVARNLKKSGSTP---LKFHRKIKL------HVVSIAAGMVHSTALTED 414
GE + P L HR +L V+ +A G H+ LTE+
Sbjct: 209 GELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Score = 224 (83.9 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 65/228 (28%), Positives = 115/228 (50%)
Query: 147 GSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
GS ++ TE +F WG + Q+G N +P +V G + IS +HS V
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYYHSAFV 205
Query: 204 TSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLAT 263
T+ GE+Y +G G+LG P+ + + + TP+ V+ +V +A HTV+ T
Sbjct: 206 TTDGELYVFGEPENGKLGLPNQLLGNHR----TPQLVSEI--PEKVIQVACGGEHTVVLT 259
Query: 264 EGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVVSESGEVFT 321
E V+T+G + GQLG T + P+ + +++ + I+ ++ HTA++++ G ++T
Sbjct: 260 ENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 322 WGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGA 369
+G R G+LG G N +++ P + + + VA H +V A
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAA 366
Score = 224 (83.9 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 66/232 (28%), Positives = 117/232 (50%)
Query: 143 LQVVGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHG--FVIKLISAAK 197
L G + V+TE V++ G QLG G+ ++ V S IK +SA
Sbjct: 91 LAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTE-ERNTFHVISFFTSEHKIKQLSAGS 149
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
S A+T G ++ WG G++G + + V P++VT G + V I+ +
Sbjct: 150 NTSAALTEDGRLFMWGDNSEGQIGLKNV------SNVCVPQQVTIG---KPVSWISCGYY 200
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTS--VDTQPTPRRVSSLKLKIIAVAAANKHTAVVSE 315
H+ T GE++ +G G+LG + + TP+ VS + K+I VA +HT V++E
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 316 SGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
+ V+T+G + GQLG GT ++ P+V+E+++ + + ++ + HT ++
Sbjct: 261 NA-VYTFGLGQFGQLGLGTFLFETS-EPKVIENIRDQTISYISCGENHTALI 310
Score = 168 (64.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 56/198 (28%), Positives = 97/198 (48%)
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAA 360
+ ++ ++H+AVV+ + +++ +G N GQLG G+ ++ S P V++LK + + A
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISK--PTCVKALKPEKVKLAACG 95
Query: 361 KYHTIVLGADGERVIVARNLKKSGSTPL-KFHRKIKLHVVS----------IAAGMVHST 409
+ HT+V G + A G L + HV+S ++AG S
Sbjct: 96 RNHTLVSTEGGN--VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 410 ALTEDGALFYWA-SSDPDLRCQQLYSMC-------GRNVVSISAGKYWTAAVTATGDVYM 461
ALTEDG LF W +S+ + + + ++C G+ V IS G Y +A VT G++Y+
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYV 213
Query: 462 WDGKKSKDNPPLVTRLHG 479
+ G+ L +L G
Sbjct: 214 F-GEPENGKLGLPNQLLG 230
Score = 41 (19.5 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 808 DTEITEVSKKKEEDAMSE---GNVAIEYSKQSGFLVQ 841
DT +TE E + MSE G ++ Q F+ Q
Sbjct: 535 DTALTENDDSDEYEEMSEMKEGKACKQHVSQGIFMTQ 571
Score = 41 (19.5 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 808 DTEITEVSKKKEEDAMSEGNVAIEYSKQ-SGFLVQKKDNADS 848
D E +KKE+ + E + EY++ G+++ D+ADS
Sbjct: 893 DDSSAETIEKKEKANLEERAIC-EYNENPKGYML---DDADS 930
Score = 40 (19.1 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 533 NDESNNMPSAIDKDDSGVRLAPSLKSLCENVAAQCLVEP-RNALQLLEISDSLGADDLKK 591
ND+S+ I+K + ++ EN L + ++L++LE S++ + D+KK
Sbjct: 892 NDDSS--AETIEKKEKANLEERAICEYNENPKGYMLDDADSSSLEILENSETTPSKDMKK 949
Score = 39 (18.8 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 800 SNAAKDFFDTEITEVSKKKEEDAMSEGN 827
S A DF ++E+ ++KE S+GN
Sbjct: 777 SMAKYDFKCDRLSEIPEEKEGAEDSKGN 804
Score = 38 (18.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 796 SEVGSNAAKDFFDTEITEVSKKKEEDAMSEGNVAIEYSKQ 835
SE A F E E S ++ED E + I Y ++
Sbjct: 721 SESQQGIADGFQQPEAIEFSSGEKEDDEVETDQNIRYGRK 760
Score = 37 (18.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 922 IKVNQPTRNKDQFEDPSFGRSEGKV 946
I + QP + F D G G+V
Sbjct: 567 IFMTQPATTIEAFSDEEVGNDTGQV 591
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 214 (80.4 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 60/214 (28%), Positives = 109/214 (50%)
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAA-VITPRRVTS-GLGSR- 247
K I + H++ + + G +Y+WG G G LGH + S + TP+++T+ L +
Sbjct: 248 KKICSGSDHNLLLGNDGSLYSWGNGYFGALGH---GVGSNDKENIYTPKKITTFTLNNNE 304
Query: 248 -RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDT--QPTPRRVSSL-------K 297
R+ IA +H++ T E++T+G GQLG+ DT P+R+ S K
Sbjct: 305 SRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNK 364
Query: 298 LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGV 357
+K I A + ++ ++ G V++WG N G LG+GT+ + +Y+P+ ++SL ++ +
Sbjct: 365 IKSI-FAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNEN--HYSPKKIQSLS--NIKKI 419
Query: 358 AAAKYHTIVLGADGERVIVARNLKKSGSTPLKFH 391
+ HT+ + + + N G T LKF+
Sbjct: 420 TSGFKHTLAQSINNDIYVFGDNT--FGQTALKFN 451
Score = 200 (75.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 55/196 (28%), Positives = 100/196 (51%)
Query: 157 VFSWGSGANYQLGTGNAHLQK----LPCKVDS--LHGFVIKLISAA--KFHSVAVTSLGE 208
++SWG+G LG G K P K+ + L+ +++ A +HS+ +T+ E
Sbjct: 266 LYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNE 325
Query: 209 VYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTS---GLGSRRVKTIAAAKH-HTVLATE 264
+YT+GYG G+LGH + D + P+R+ S ++K+I A H ++ T
Sbjct: 326 IYTFGYGEFGQLGHGENDTLNHYI----PKRIKSTGDNAAGNKIKSIFAGDHANSFYITT 381
Query: 265 GGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGC 324
G V++WG N G LG+ + + +P+++ SL I + + KHT S + +++ +G
Sbjct: 382 DGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLS-NIKKITSGFKHTLAQSINNDIYVFGD 440
Query: 325 NREGQLGYGTSNSASN 340
N GQ + +++N
Sbjct: 441 NTFGQTALKFNYNSNN 456
Score = 132 (51.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 43/148 (29%), Positives = 75/148 (50%)
Query: 142 VLQVVGSGYNSVA----TEVFSWGSGANYQLGTG-NAHLQK-LPCKV----DSLHGFVIK 191
++ + GY+S+ E++++G G QLG G N L +P ++ D+ G IK
Sbjct: 307 IVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIK 366
Query: 192 LISAAKF-HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
I A +S +T+ G VY+WG+ GG LGH + H +P+++ S L + +K
Sbjct: 367 SIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENH------YSPKKIQS-LSN--IK 417
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQ 278
I + HT+ + +++ +G N GQ
Sbjct: 418 KITSGFKHTLAQSINNDIYVFGDNTFGQ 445
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 217 (81.4 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 70/239 (29%), Positives = 118/239 (49%)
Query: 133 TPVDLLSGPVLQVVGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFV 189
TP D + L G+ ++ TE +F WG + Q+G + +P +V G
Sbjct: 137 TPADTIKQ--LSA-GANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV--GKP 191
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRV 249
I IS +HS VT GE+YT+G G+LG P+ + + ++ P+RV G+ R +
Sbjct: 192 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRS----PQRVL-GIPERVI 246
Query: 250 KTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLK-LKIIAVAAAN 307
+ +A HTV+ TE V+ +G + GQLG T + P+ + +K KI ++
Sbjct: 247 Q-VACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGE 304
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
HTA+++E G ++T+G R G+LG G N + + P + + + +A H +V
Sbjct: 305 NHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLV 363
Score = 214 (80.4 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 80/295 (27%), Positives = 134/295 (45%)
Query: 141 PVLQVVGSGYNSVAT---EVFSWGSGANYQLGTGN-AHLQKLPCKVDSLHGFVIKLISAA 196
P+ G + ++ T +++ +GS QLG G+ A + K C + +L +KL +
Sbjct: 37 PICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTC-IKALKPEKVKLAACG 95
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSG--QAAVITPRRVTSGLGSRRVKTIAA 254
+ H++ T G VY G G+LG D D Q TP + +K ++A
Sbjct: 96 RNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP--------ADTIKQLSA 147
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVS 314
+ + TE G++F WG N EGQ+G P V+ K I ++ H+A V+
Sbjct: 148 GANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGK-PISWISCGYYHSAFVT 206
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
GE++T+G G+LG ++ +P+ V + + ++ VA HT+VL E+V
Sbjct: 207 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER-VIQVACGGGHTVVLT---EKV 262
Query: 375 IVARNLKKSGSTPL----------KFHRKIK-LHVVSIAAGMVHSTALTEDGALF 418
+ A L + G L K +IK + I+ G H+ +TE G L+
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLY 317
Score = 205 (77.2 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 73/263 (27%), Positives = 115/263 (43%)
Query: 162 SGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
+GA + G + +P K + I L S H+ VT ++Y +G G+LG
Sbjct: 11 TGAVFTFGK-TKFAENIPSKFWFKNDIPICL-SCGDEHTAIVTGNNKLYMFGSNNWGQLG 68
Query: 222 HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY 281
+AA+I P + + L +VK A ++HT+++T+ G V+ G N EGQLG
Sbjct: 69 L------GSKAAIIKPTCIKA-LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGL 121
Query: 282 TSVDTQPTPRRVSSLK-LKIIAVAAANKHT-AVVSESGEVFTWGCNREGQLGYGTSNSAS 339
D + T ++ I +A +T A ++E G++F WG N EGQ+G ++
Sbjct: 122 GDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVC 181
Query: 340 NYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTP---LKFHRK--- 393
P E GK + ++ YH+ + DGE P L HR
Sbjct: 182 --IPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQR 237
Query: 394 ---IKLHVVSIAAGMVHSTALTE 413
I V+ +A G H+ LTE
Sbjct: 238 VLGIPERVIQVACGGGHTVVLTE 260
Score = 59 (25.8 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 19/89 (21%), Positives = 37/89 (41%)
Query: 465 KKSKDNPPLVTRLHGIKKATSVSVGETHLLIVGSLYHPIYPP---NVAKNPQKLKLNGRN 521
++ ++ PP + G + T + ++P PP +V P+K
Sbjct: 411 RRERERPPCSASMVGTLPPLEGTSAST-----SAYFYPSSPPFHLSVNNYPEKSPSESME 465
Query: 522 DLE-EFYEDFMFNDESNNMPSAIDKDDSG 549
L+ +++ED M D SA+D ++ G
Sbjct: 466 PLDSDYFEDKMNKDTETENSSAVDSENFG 494
Score = 43 (20.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 909 SASLREIQSEQSKIKVNQPTR--NKDQFEDPSFGRSEGKVLLSSFMTS 954
S S+ + S+ + K+N+ T N + +FG + + ++ MT+
Sbjct: 461 SESMEPLDSDYFEDKMNKDTETENSSAVDSENFGETNDILNMTHMMTT 508
Score = 43 (20.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 24/82 (29%), Positives = 34/82 (41%)
Query: 667 DNHTKKSTLKNEGDNRLDS-FFEPKA--DANQEISKQVRA-----LRKKLQQIEMLEVKL 718
+N+ +KS +E LDS +FE K D E S V + L M+
Sbjct: 453 NNYPEKSP--SESMEPLDSDYFEDKMNKDTETENSSAVDSENFGETNDILNMTHMMTTS- 509
Query: 719 SNGHILDEQQIAKLQTKSVLER 740
SN +LD I K Q + E+
Sbjct: 510 SNEKLLDFSPIQKQQNQDTFEK 531
Score = 42 (19.8 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 30/169 (17%), Positives = 65/169 (38%)
Query: 672 KSTLKNEGDNRLDSFFEPKAD----ANQEISKQVRALRKKLQQIEMLEVKLSNGHILDEQ 727
K ++E +++ DS F+ D + E +K + R+ +Q + S +++E
Sbjct: 631 KKIRESEENSKSDSLFDDLPDKTMNSESEDNKDIAEERRSSEQNMTFD---SETELVEEP 687
Query: 728 QIAKLQTKSVLERSLAELGVPIELPQAIAASAASPDGRGNXXXXXXXXXXXXXXXXXXXX 787
+ ++ + E+ AE +E P+ + S+ D +
Sbjct: 688 D-SYMECERHSEQDSAE---ELEQPKLVEYSSEEKDEKDEKDDDEVETENLWYDRNCTEQ 743
Query: 788 EAVSDFSVSEVGSNAAKDFFDTEITEVSKKKEEDAMSEGNVAIEYSKQS 836
E + F + D ++ + +++E SEGNV +E Q+
Sbjct: 744 ETENVFRATRFFPKF--DLKHDHLSGIPEEQEGPEDSEGNVVVEQVVQA 790
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 179 (68.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAA 306
R + + H +L G+VF+WG R GQLG+ +++ + PR + +L+ ++A VAA
Sbjct: 159 RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAG 218
Query: 307 NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASN 340
H+ VSE+G+++ WG N GQL T N A +
Sbjct: 219 GWHSVCVSETGDIYIWGWNESGQLALPTRNLAED 252
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 50/165 (30%), Positives = 77/165 (46%)
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
+H ++ +G+VF+WG R GQLG+GT + PR++E+L+G + VAA +H++ +
Sbjct: 168 EHALLLDAAGQVFSWGGGRHGQLGHGTLEA--ELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 368 GADGERVIVARNLKKSGSTPLKFHR------KIKLHVVSIAAGMVHSTALTEDGALFYWA 421
G+ I N +SG L + ++ V T EDGA +
Sbjct: 226 SETGDIYIWGWN--ESGQLALPTRNLAEDGETVAREELNEDGSQVKRTGGAEDGAPAPFI 283
Query: 422 SSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWD-GK 465
+ P L G + V S G TA VT TG++Y W GK
Sbjct: 284 AVQPFPALLDL--PMGSDAVKASCGSRHTAVVTRTGELYTWGWGK 326
Score = 147 (56.8 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
A +VFSWG G + QLG G + P +++L G V+ ++A +HSV V+ G++Y WG
Sbjct: 176 AGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG 235
Query: 214 YGRGGRLGHP 223
+ G+L P
Sbjct: 236 WNESGQLALP 245
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H++ + + G+V++WG GR G+LGH + A + PR + L + +AA H
Sbjct: 169 HALLLDAAGQVFSWGGGRHGQLGHGTLE------AELEPR-LLEALQGLVMAEVAAGGWH 221
Query: 259 TVLATEGGEVFTWGSNREGQL 279
+V +E G+++ WG N GQL
Sbjct: 222 SVCVSETGDIYIWGWNESGQL 242
Score = 113 (44.8 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAA--NKHTAVVSESGE 318
L +G +V G +G + QP P + L + AV A+ ++HTAVV+ +GE
Sbjct: 261 LNEDGSQVKRTGGAEDGAPA-PFIAVQPFPALLD-LPMGSDAVKASCGSRHTAVVTRTGE 318
Query: 319 VFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV--GVAAAKYHTIVLGAD 370
++TWG + GQLG+ + S PR VE K L V ++T V +
Sbjct: 319 LYTWGWGKYGQLGHEDTTSLDR--PRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 370
Score = 105 (42.0 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL---KLKI 300
+GS VK ++H T + T GE++TWG + GQLG+ + PRRV +L++
Sbjct: 296 MGSDAVKASCGSRH-TAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQV 354
Query: 301 IAVAAANKHTAVVS-ESGE 318
AV +T V + E G+
Sbjct: 355 KAVTCGPWNTYVYAVEKGK 373
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 208 (78.3 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 65/216 (30%), Positives = 102/216 (47%)
Query: 179 PCKVDSLHGFVIKLISA--AKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVIT 236
P ++ L G I+ ++ A FH VA+ G YTWG G+LGH D I + V+
Sbjct: 47 PTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDM-IQRDRPTVV- 104
Query: 237 PRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG-------YTSVDTQPT 289
SGL ++ AA ++HTV+ ++ G+ +G N+ GQLG + SV+ + T
Sbjct: 105 -----SGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVEST 159
Query: 290 PRRVSSLKLKIIAVAAANKHTAVVS--ESGEVFTWGCNREGQLGYGTSNSASN------- 340
P + ++ VA T +S E + T G + GQLG+GT N +
Sbjct: 160 PLPCV-VSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRL 218
Query: 341 -YT----PRVVESLKGKDLVGVAAAKYHTIVLGADG 371
Y P+ + SL G+ +V VA HT+ + +G
Sbjct: 219 AYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNG 254
Score = 190 (71.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 70/238 (29%), Positives = 106/238 (44%)
Query: 234 VITPRRVTS--GLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
+++P R+ G+ R V T A+ H L EG +TWG N +GQLG+ + + P
Sbjct: 44 LVSPTRLRPLVGVNIRFVATGCASFHCVALDVEG-RCYTWGRNEKGQLGHGDMIQRDRPT 102
Query: 292 RVSSL-KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES-- 348
VS L K KI+ AA HT VVS+ G+ +G N+ GQLG G++ + + VES
Sbjct: 103 VVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNG--FVSVEVESTP 160
Query: 349 ---LKGKDLVGVAAAKYHTIVLGA-DGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAG 404
+ ++ VA T+ L + +G ++ A L + G H
Sbjct: 161 LPCVVSDEVTNVACGADFTVWLSSTEGASILTA-GLPQYGQLG---------HGTDNEFN 210
Query: 405 MVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
M S+ L Y A P + + S+ G +V ++ G T AV G VY W
Sbjct: 211 MKDSSV-----RLAYEAQPRP----KAIASLAGETIVKVACGTNHTVAVDKNGYVYTW 259
Score = 181 (68.8 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 55/196 (28%), Positives = 94/196 (47%)
Query: 176 QKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVI 235
Q P + SL G I ++ H+VAV G VYTWG+G GRLGH + Q
Sbjct: 223 QPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHRE------QKDEW 276
Query: 236 TPRRVTSGLGSRRVKT---IAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR 292
PRR+ + + ++A ++ GG+++ WG + + P P
Sbjct: 277 APRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKNNGDDWM----YPKPMM 332
Query: 293 -VSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKG 351
+S L+ + + + H V ++S + +WG + G+LGYG + S+ P+ V+ L+G
Sbjct: 333 DLSGWNLRWMD--SGSMHHFVGADSSCI-SWGHAQYGELGYGPNGQKSSAAPKKVDMLEG 389
Query: 352 KDLVGVAAAKYHTIVL 367
++GVA H++V+
Sbjct: 390 MHVMGVACGFCHSMVI 405
Score = 54 (24.1 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWA---------SSDPDLRCQQLYSMCGRNVVS-----I 443
+V +A G H+ A+ ++G ++ W D + + RN V +
Sbjct: 237 IVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAIL 296
Query: 444 SAGKYWTAAVTATGDVYMWDGKKSKDN 470
SAG +A G +YMW K K+N
Sbjct: 297 SAGSANSACTAGGGQLYMWG--KIKNN 321
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 198 (74.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 64/210 (30%), Positives = 103/210 (49%)
Query: 130 KSRTP-VDLLSGPVLQVVGSGYNSVATE---VFSWGSGANYQLGTG-NAHLQKLPCKVDS 184
K R+P D + P + V + S +TE V + G G QLG G N +K P V S
Sbjct: 8 KRRSPPADAI--PKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV-S 64
Query: 185 LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
+ V++ A H+V ++ G+VY++G G LG D + + + P +V
Sbjct: 65 IPEDVVQA-EAGGMHTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVEL-- 117
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE--GQLGYTS-VDTQPTPRRVSSLKLKII 301
+V ++A HT T+ G VF WGS R+ G +G + P +V L + ++
Sbjct: 118 -QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDVPVV 175
Query: 302 AVAAANKHTAVVSESGEVFTWGCNREGQLG 331
VA+ N H +++ G+++T GC +GQLG
Sbjct: 176 KVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 182 (69.1 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 59/172 (34%), Positives = 85/172 (49%)
Query: 258 HTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
H +TE G V T G GQLG +V + P VS + ++ A HT +S+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSKS 85
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIV 376
G+V+++GCN EG LG TS S P VE L+ K +V V+A HT L DG RV +
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEK-VVQVSAGDSHTAALTDDG-RVFL 142
Query: 377 ARNLKKSGST-----PLK-----FHRKIKLHVVSIAAGMVHSTALTEDGALF 418
+ + + P+K ++ + VV +A+G H LT DG L+
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLY 194
Score = 40 (19.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 428 RCQQLYSMCGRNVVSIS---AGKYWTAAVTATGDVY 460
+C L S R V G Y+T A++ G VY
Sbjct: 227 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY 262
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 214 (80.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 68/254 (26%), Positives = 121/254 (47%)
Query: 139 SGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
SG ++ V G + + T+ + ++GSG+N LG G+ P V++L G+ + +
Sbjct: 389 SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQV 448
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
+ H +A+++ E++ WG G GRLG + HS P++V G + +
Sbjct: 449 ACGASHVLALSTERELFAWGRGDSGRLGLGTRESHS------CPQQVPMPPGQEAQRVVC 502
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLG--YTSVDTQPTPRR----------VSSLKLK-- 299
+L T G+ GSNR +LG + S+ +P P + + S L
Sbjct: 503 GIDSSMIL-TVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQE 561
Query: 300 -IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
++++ H+A V+ SG+ +T+G N+ GQLG T+ + P V+ L+G + VA
Sbjct: 562 PLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLG--TNTRRGSRAPCKVQGLEGIKMAMVA 619
Query: 359 AAKYHTIVLGADGE 372
T+ +GA+ E
Sbjct: 620 CGDAFTVAIGAESE 633
Score = 173 (66.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 98/403 (24%), Positives = 160/403 (39%)
Query: 104 RALHFGHLAVASVLLQSGA-SITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATEVFSWGS 162
RAL H V SV ++ S+ + SRT G V + V++WG
Sbjct: 260 RALLNLHTDVGSVRMRRAEKSVAPSNTGSRTTSVRCRGIPRGPVRPAIPPPLSSVYAWGG 319
Query: 163 GANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG---YGRGGR 219
G LGT P ++ L+ V++ ++A + VT G + W G GG
Sbjct: 320 G----LGT--------PLRLPMLNTEVVQ-VAAGRTQKAGVTRSGRLILWEAPPLGAGGG 366
Query: 220 LGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQL 279
P + Q I+ R G +K +A T T+ G + T+GS G L
Sbjct: 367 SLLPGA-VEQPQPQFIS--RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCL 423
Query: 280 GYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSA 338
G+ S+ P V +L +++ VA H +S E+F WG G+LG GT S
Sbjct: 424 GHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESH 483
Query: 339 SNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHV 398
S P+ V G++ V +++L G+ + N +F+ K+ L
Sbjct: 484 S--CPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSN---------RFN-KLGLDH 531
Query: 399 VSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSM---CGRNVVSISAGKYWTAAVTA 455
+S+ V + E+ F S P L + L S+ + ++G +T
Sbjct: 532 LSLGEEPVPHQQV-EEALSFTLLGSAP-LDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQ 589
Query: 456 TGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLIVGS 498
G + + ++ P V L GIK A V+ G+ + +G+
Sbjct: 590 HGQLGT-NTRRGSRAPCKVQGLEGIKMAM-VACGDAFTVAIGA 630
Score = 169 (64.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 57/220 (25%), Positives = 95/220 (43%)
Query: 125 TLEDCKSRTPVDLLSG-PVLQVV-GSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLP 179
+L D T V+ L G ++QV G+ + S E+F+WG G + +LG G P
Sbjct: 427 SLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCP 486
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDI------HSGQAA 233
+V G + + S+ +T G+ G R +LG + H
Sbjct: 487 QQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEE 546
Query: 234 VITPRRVTSG-LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR 292
++ + S L + +I H+ T G+ +T+GSN+ GQLG + P +
Sbjct: 547 ALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCK 606
Query: 293 VSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
V L+ +K+ VA + T + EV++WG G+LG
Sbjct: 607 VQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLG 646
Score = 148 (57.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 106 LHFGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQV-VGSGYNSVAT---EVFSWG 161
L G V ++ S TL P+D P+L + +G+ +++ T + +++G
Sbjct: 532 LSLGEEPVPHQQVEEALSFTL---LGSAPLD--QEPLLSIDLGTAHSAAVTASGDCYTFG 586
Query: 162 SGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
S + QLGT + PCKV L G + +++ +VA+ + EVY+WG G GRLG
Sbjct: 587 SNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLG 646
Query: 222 HPDFD 226
D D
Sbjct: 647 RRDED 651
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 214 (80.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 70/254 (27%), Positives = 122/254 (48%)
Query: 139 SGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
SG ++ V G + + T+ + ++GSG+N LG G+ + P V++L G+ + +
Sbjct: 398 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQV 457
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
+ H +A+++ E++ WG G GGRLG + HS P++V+ G + +
Sbjct: 458 ACGASHVLALSTERELFAWGRGDGGRLGLGTRESHS------CPQQVSMPPGQEAQRVVC 511
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYT--SVDTQPTPRR-----VSSLKL-------- 298
+L T G GSNR +LG S+ +P P + +S L
Sbjct: 512 GIDSSMIL-TVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDRE 570
Query: 299 KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
+++V H+A V+ SG+ +T+G N+ GQLG T+ + P V+ L+ + VA
Sbjct: 571 PLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLG--TNARRVSRAPCQVQGLQNIKIAMVA 628
Query: 359 AAKYHTIVLGADGE 372
T+ +GA+GE
Sbjct: 629 CGDAFTVAVGAEGE 642
Score = 177 (67.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 62/220 (28%), Positives = 94/220 (42%)
Query: 125 TLEDCKSRTPVDLLSG-PVLQVV-GSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLP 179
+L D T V+ L G ++QV G+ + S E+F+WG G +LG G P
Sbjct: 436 SLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCP 495
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRR 239
+V G + + S+ +T G G R +LG + A
Sbjct: 496 QQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEE 555
Query: 240 VTS--GLGS----RR-VKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR 292
S LGS R + ++ H+ T G+ +T+GSN+ GQLG + P +
Sbjct: 556 ALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQ 615
Query: 293 VSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
V L+ +KI VA + T V GEV++WG G+LG
Sbjct: 616 VQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLG 655
Score = 153 (58.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 52/205 (25%), Positives = 86/205 (41%)
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG---YGRGGRLGHPDFDIHSGQAAVI 235
P ++ L+ V++ ++A + VT G + W G GG P + Q +
Sbjct: 333 PLRLPMLNTEVVQ-VAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGA-VEQQQPQFV 390
Query: 236 TPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS 295
+ R G +K +A T T+ G + T+GS G LG+ S++ P V +
Sbjct: 391 S--RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEA 448
Query: 296 LK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL 354
L +++ VA H +S E+F WG G+LG GT S S P+ V G++
Sbjct: 449 LLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHS--CPQQVSMPPGQEA 506
Query: 355 VGVAAAKYHTIVLGADGERVIVARN 379
V +++L G + N
Sbjct: 507 QRVVCGIDSSMILTVPGRALACGSN 531
Score = 150 (57.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/109 (34%), Positives = 58/109 (53%)
Query: 141 PVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAA 196
P+L V +G+ +++ T + +++GS + QLGT + + PC+V L I +++
Sbjct: 571 PLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNIKIAMVACG 630
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDI---HSGQAAVITPRRVTS 242
+VAV + GEVY+WG G GRLG D D Q I P VTS
Sbjct: 631 DAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDEIHPYTVTS 679
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 46/167 (27%), Positives = 72/167 (43%)
Query: 206 LGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEG 265
L VY WG G L P + Q A R +G+ +R + I L G
Sbjct: 320 LSSVYAWGGGLSAPLRLPMLNTEVVQVAA--GRTQKAGV-TRSGRLILWEA--PPLGAGG 374
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCN 325
G + G+ + Q + S + S + +K VA + TA +++ G + T+G
Sbjct: 375 GALLP-GAVEQQQPQFVSRFLEGQ----SGVTIK--HVACGDLFTACLTDRGIIMTFGSG 427
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G LG+G+ N S P +VE+L G ++V VA H + L + E
Sbjct: 428 SNGCLGHGSLNDISQ--PTIVEALLGYEMVQVACGASHVLALSTERE 472
Score = 74 (31.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 42/160 (26%), Positives = 66/160 (41%)
Query: 369 ADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSD---- 424
A ++V A + GS P F R+ ++S+ G HS A+T G + + S+
Sbjct: 548 APNQQVEEALSFTPLGSAP--FDRE---PLLSVDLGTAHSAAVTASGDCYTFGSNQHGQL 602
Query: 425 -PDLR------CQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWD-------GKKSKD- 469
+ R CQ + + + ++ G +T AV A G+VY W G++ +D
Sbjct: 603 GTNARRVSRAPCQ-VQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRDEDA 661
Query: 470 NPPLVTRLHGIKKATSVSVGETH---LLIVGSLYHPIYPP 506
P +L I T SV H LL V + PP
Sbjct: 662 GLPRPVQLDEIHPYTVTSVSCCHGNTLLAVRPVTDEPVPP 701
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 215 (80.7 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 63/203 (31%), Positives = 98/203 (48%)
Query: 186 HGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG--GRLGHPDFDIHSGQAAVITPRRVTSG 243
HG VI ++A S A+T G+VY WG R G LG FD + V T ++
Sbjct: 229 HGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILG---FD---AKTKVQTTPKLLPD 282
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT----PRRVSSLKLK 299
L +++K + +H + + G V +WGS ++ QLG ++ PR L
Sbjct: 283 L--KKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFG-LPKG 339
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGY----GTSNSASNYTPRVVESLKGKDLV 355
I+ + A H+ V +SG+VF WG N G+ G G S +A + P VV+SL K++
Sbjct: 340 IVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVH-PTVVDSLSKKNVT 398
Query: 356 GVAAAKYHTIVLGADGERVIVAR 378
+ +H+I DGE ++ R
Sbjct: 399 QICGGAHHSIAATQDGECLVWGR 421
Score = 211 (79.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 71/220 (32%), Positives = 96/220 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKL----PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTW 212
V SWGSG QLG KL P + G V I A FHS AV G+V+ W
Sbjct: 305 VLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGIVH--IGAGAFHSFAVHQSGKVFAW 362
Query: 213 GYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG 272
G G G + + +AA++ P V S L + V I HH++ AT+ GE WG
Sbjct: 363 GLNSFGETGIRE-NAGDSEAAIVHPTVVDS-LSKKNVTQICGGAHHSIAATQDGECLVWG 420
Query: 273 SNREGQLGYTSVDTQPT----------------PRRVSSLKLKIIAVAAANKHTAVVSES 316
Q G +DT P P V +K K AVAA + H+ + S
Sbjct: 421 RLDGYQTGL-KIDTLPDDAVIKDERDRPRILIEPTAVPGIKAK--AVAAGSDHSIAIDTS 477
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVES--LKGKDL 354
G ++WG + Q G GT + T V+E+ ++GK L
Sbjct: 478 GRPWSWGFSATYQTGQGTQDDVEVAT--VIENTAVRGKSL 515
Score = 163 (62.4 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 57/223 (25%), Positives = 92/223 (41%)
Query: 222 HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR--EGQL 279
+PD + H I G + +AA + T+ G+V+ WG+ R +G L
Sbjct: 209 NPDLNPHECTPTAIPSSAFPHGTV---IVEVAAGDSSSFALTDEGQVYGWGTFRSNDGIL 265
Query: 280 GYTS-VDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGT--SN 336
G+ + Q TP+ + LK KI + + H +++ G V +WG ++ QLG N
Sbjct: 266 GFDAKTKVQTTPKLLPDLK-KIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERN 324
Query: 337 SASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLK------- 389
+ PR KG +V + A +H+ + G+ + A L G T ++
Sbjct: 325 KLNGLQPREFGLPKG--IVHIGAGAFHSFAVHQSGK--VFAWGLNSFGETGIRENAGDSE 380
Query: 390 ---FHRKI-----KLHVVSIAAGMVHSTALTEDGALFYWASSD 424
H + K +V I G HS A T+DG W D
Sbjct: 381 AAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLD 423
Score = 58 (25.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 25/86 (29%), Positives = 37/86 (43%)
Query: 141 PVLQVVGSGYNSVATEVFSWGSGANYQLGTG---NAHLQKLPCKVDSLHGFVIKLISAAK 197
P +VV + + V+ G G++ +LG G N K P L + ++ A
Sbjct: 96 PRPKVVINNAPTAKLNVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAV 155
Query: 198 --FHSVAVTSLGEVYTWGYGRGGRLG 221
H VA+T +V TWG G LG
Sbjct: 156 GGMHCVALTHDNKVLTWGVNDQGALG 181
Score = 43 (20.2 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 400 SIAAGMVHSTALTEDGALFYWASS 423
++AAG HS A+ G + W S
Sbjct: 463 AVAAGSDHSIAIDTSGRPWSWGFS 486
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 203 (76.5 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 67/242 (27%), Positives = 109/242 (45%)
Query: 135 VDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLIS 194
V LL+GP + S N V + + Y G G + QKL + S G + +
Sbjct: 329 VTLLNGPNKRPRSSTVNEAPIAVVTSRTSEVYVWGGGKSTPQKLDA-IKS--GCSARQVC 385
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
A H VT E+YTW +GG H H +A+ P+ V L + ++ ++
Sbjct: 386 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG-HGDRASYRQPKHVEK-LQGKAIRQVSC 443
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLG----YTSVDTQPTPRRVSSLKLKIIAVAAANKHT 310
TV T+ G+++ +GS+ G +G Y S +P L + V+ + H
Sbjct: 444 GDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFF-LTNPVEQVSCGDNHV 502
Query: 311 AVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGAD 370
AV++ + EV+TWGC G+LG + +YTP+ V+ K ++V V T +L
Sbjct: 503 AVLTRNREVYTWGCGEYGRLGLDSEED--HYTPQKVDVPKTLNIVSVHCGCDGTFLLTQT 560
Query: 371 GE 372
G+
Sbjct: 561 GK 562
Score = 185 (70.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 53/192 (27%), Positives = 94/192 (48%)
Query: 152 SVATEVFSW-----GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V E+++W G+ + QLG G+ + P V+ L G I+ +S +V +T
Sbjct: 395 TVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDE 454
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G++Y +G G +G D G + V+ P ++ L + V+ ++ +H + T
Sbjct: 455 GQLYAFGSDYYGCIG---IDKAYG-SEVLEPLQLDFFL-TNPVEQVSCGDNHVAVLTRNR 509
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCN 325
EV+TWG G+LG S + TP++V K L I++V T +++++G+V G N
Sbjct: 510 EVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLN 569
Query: 326 REGQLGYGTSNS 337
+LG S
Sbjct: 570 EFNKLGLNQCTS 581
Score = 147 (56.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 66/266 (24%), Positives = 111/266 (41%)
Query: 138 LSGPVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
L+ PV QV G + +V T EV++WG G +LG + P KVD I +
Sbjct: 488 LTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSV 547
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDI----HSGQAAV--ITPRRVTSGLGSR 247
+ +T G+V G +LG H V T + L
Sbjct: 548 HCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFY 607
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAA 305
+++TI+ K HT E G + T+GSN+ GQLG ++ L K +I V+
Sbjct: 608 KIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSC 667
Query: 306 ANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYT-----PR-VVESLKGKDLVGVAA 359
++ T ++ +F WG G+L + A PR + SL + ++
Sbjct: 668 GDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFGSLH--HVPDLSC 725
Query: 360 AKYHTIVLGADGERVIVARNLKKSGS 385
+HTI++ E+V+ ++ ++ + S
Sbjct: 726 RGWHTIIVV---EKVLNSKTIRSNSS 748
Score = 114 (45.2 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 52/230 (22%), Positives = 93/230 (40%)
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHT 259
+V + EVY WG GG+ D + SG +R+V A H
Sbjct: 350 AVVTSRTSEVYVWG---GGKSTPQKLDA------------IKSGCSARQV---CAGNTHF 391
Query: 260 VLATEGGEVFTW-----GSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAANKHTAVV 313
+ T E++TW G+ GQLG+ + P+ V L+ K I V+ + T +
Sbjct: 392 AVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCI 451
Query: 314 SESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGAD--- 370
++ G+++ +G + G +G + + P ++ + V+ H VL +
Sbjct: 452 TDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREV 511
Query: 371 -----GERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDG 415
GE + + ++ TP K L++VS+ G + LT+ G
Sbjct: 512 YTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTG 561
Score = 64 (27.6 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 32/134 (23%), Positives = 56/134 (41%)
Query: 385 STPLKFHRKIKLHVV-SIAAGMVHSTALTEDGALFYWASSDPDLRCQQL----YS----- 434
+T L +++ + + +I+ G H+ ++ E G L + S+ +C QL Y
Sbjct: 595 ATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSN----KCGQLGVGDYKKHLGI 650
Query: 435 ------MCGRNVVSISAGKYWTAAVTATGDVYMW-DGKKSKDNPPLVTRLHGIKKATSVS 487
+ G+ V+ +S G +T A T ++ W +G + R HG TS
Sbjct: 651 NLLAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWP 710
Query: 488 VGETHLLIVGSLYH 501
I GSL+H
Sbjct: 711 RP-----IFGSLHH 719
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 237 (88.5 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 75/232 (32%), Positives = 113/232 (48%)
Query: 141 PVLQVVGSGYNSVA-TE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAA 196
P+ + + S A TE +F WG + QLG GN LP +++ G I +S
Sbjct: 140 PIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNM--GQSIHWVSCG 197
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
HS VT G+VY++G GRLG H A P+RV S L S V +A
Sbjct: 198 YRHSALVTDSGDVYSFGESADGRLG---LSAHQ-LANHSYPQRVES-LHS--VLQVACGG 250
Query: 257 HHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVS 314
HT+ TE E++ +G GQLG T V +P V K ++ V +H+A+++
Sbjct: 251 KHTLALTED-ELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALIT 309
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
+SG ++T+G R G+LG+G N + +TP V + ++ VA H +V
Sbjct: 310 DSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLV 361
Score = 217 (81.4 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 77/289 (26%), Positives = 130/289 (44%)
Query: 141 PVLQVVGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAK 197
PV G +++ TE +F +G QLG P V L G + ++
Sbjct: 36 PVHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGT 95
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
H++ TS GE+ G G+LG H + I+ +R+ +K ++A H
Sbjct: 96 DHTLVSTSQGEILAAGGNSDGQLGLG----HCNDS--ISFQRLRPFCDYAPIKLLSAGDH 149
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESG 317
+ TE G +F WG N GQLG+ + P+ ++ + I V+ +H+A+V++SG
Sbjct: 150 TSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELN-MGQSIHWVSCGYRHSALVTDSG 208
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGAD------- 370
+V+++G + +G+LG A++ P+ VESL ++ VA HT+ L D
Sbjct: 209 DVYSFGESADGRLGLSAHQLANHSYPQRVESLHS--VLQVACGGKHTLALTEDELYCFGG 266
Query: 371 GE-RVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALF 418
GE + L +P+ K V + G HS +T+ G L+
Sbjct: 267 GEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLY 315
Score = 146 (56.5 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 55/184 (29%), Positives = 83/184 (45%)
Query: 296 LKLKI-IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL 354
LK I + ++ H+A V+E G +F +G N GQLG + P V+ LKG+
Sbjct: 31 LKSDIPVHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTK--PVCVKVLKGERA 88
Query: 355 VGVAAAKYHTIVLGADGERVIVARNLK-KSG----STPLKFHRKIKL----HVVSIAAGM 405
VA HT+V + GE + N + G + + F R + ++AG
Sbjct: 89 QSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGD 148
Query: 406 VHSTALTEDGALFYWASS---------DPDLRCQQLYSMCGRNVVSISAGKYWTAAVTAT 456
S ALTEDG LF W + D + +M G+++ +S G +A VT +
Sbjct: 149 HTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNM-GQSIHWVSCGYRHSALVTDS 207
Query: 457 GDVY 460
GDVY
Sbjct: 208 GDVY 211
Score = 45 (20.9 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 808 DTEITEVSKKKEEDAMSEGNVAIEYSKQSGFLVQKKDNAD 847
+ E E ++KEE+ + NV E KQ+ L + KD +
Sbjct: 1487 EEEEEEGEEEKEEEGEQKENV--EKDKQNSKLRENKDEEE 1524
Score = 42 (19.8 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 788 EAVSDFSVSEVGSNAAKDFFDTEITEVSKKKEEDAMSEGNVAIEYSKQSG 837
E + S + G + ++ + E+ E +E EG+ IE + G
Sbjct: 1304 EMKEENSSEDEGEESVREKEEQEVEEEKLSEEGSERQEGDEQIEEEDEEG 1353
Score = 39 (18.8 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 413 EDGALFYWASSDPDLR 428
E G LF SS P LR
Sbjct: 930 ESGKLFSSTSSSPQLR 945
Score = 39 (18.8 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 533 NDESNNMPSAIDKDDSG 549
+DE NN + DK SG
Sbjct: 1372 DDEENNEENTEDKSGSG 1388
Score = 37 (18.1 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1021 QGSPSDSPGMNRWFKPEAETPSSIRSIQMEEK 1052
+G D + + E+E S R I+ EEK
Sbjct: 1188 EGETEDKDAEDEEEERESEDEDSERQIEDEEK 1219
Score = 37 (18.1 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 13/55 (23%), Positives = 30/55 (54%)
Query: 796 SEVGSNAAKDFFDTEITEVSKKKEED---AMSEGNVAIEYSKQSGFLVQKKDNAD 847
SEVG+ ++ + E + +++EE+ M E N + + ++S V++K+ +
Sbjct: 1275 SEVGNEDEENQEEEEENQTKEEEEEENNEEMKEENSSEDEGEES---VREKEEQE 1326
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 234 (87.4 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 78/272 (28%), Positives = 133/272 (48%)
Query: 147 GSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
GS ++ TE +F WG + Q+G N +P +V G I IS +HS V
Sbjct: 148 GSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYYHSAFV 205
Query: 204 TSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLAT 263
T+ G++YT+G G+LG P+ + + + P+ V G+ + V+ +A HTV+ T
Sbjct: 206 TTEGQLYTFGEPECGKLGLPNQLLVNHRM----PQPVP-GIPGKVVQ-VACGGGHTVVLT 259
Query: 264 EGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFT 321
E V+T+G + GQLG T + P+ + +K KI +A HTA++++ G ++T
Sbjct: 260 EKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYT 318
Query: 322 WGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGAD---GERVIVAR 378
+G R G+LG G NS + + P + + + V+ HT+V G + +
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFATPRLGGTEEMELK 378
Query: 379 NLKKSGSTPLKFHRKIKLHVVSIAAGMV-HST 409
+ KS F L + ++++G+V H T
Sbjct: 379 EINKSC-----FSAATSLSLSNLSSGIVLHQT 405
Score = 232 (86.7 bits), Expect = 8.8e-13, Sum P(3) = 8.8e-13
Identities = 80/292 (27%), Positives = 134/292 (45%)
Query: 141 PVLQVVGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAK 197
P G + +V T +++ +GS QLG G+ P V +L +K + +
Sbjct: 37 PTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGR 96
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
H++ T G+VY G G+LG D + S T ++ R++K ++A +
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERS------TFHLISFFTSQRKIKQLSAGSN 150
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESG 317
+ TE GE+F WG N EGQ+G +V P++V+ K I ++ H+A V+ G
Sbjct: 151 TSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGK-PISWISCGYYHSAFVTTEG 209
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA 377
+++T+G G+LG ++ P+ V + GK +V VA HT+VL E+ +
Sbjct: 210 QLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK-VVQVACGGGHTVVLT---EKAVYT 265
Query: 378 RNLKKSGSTPL----------KFHRKIKLHVVS-IAAGMVHSTALTEDGALF 418
L + G L K IK +S IA G H+ +T+ G ++
Sbjct: 266 FGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMY 317
Score = 231 (86.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 75/264 (28%), Positives = 120/264 (45%)
Query: 161 GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRL 220
GSGA + G + +P K V +S H+ VT ++Y +G G+L
Sbjct: 10 GSGAVFTFGK-TQFAENIPSKF-WFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQL 67
Query: 221 GHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG 280
G G + ++ L +VK A ++HT+++TEGG+V+ G N EGQLG
Sbjct: 68 G-------LGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLG 120
Query: 281 YTSVDTQPTPRRVS--SLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSA 338
+ + T +S + + KI ++A + +A ++E GE+F WG N EGQ+G N
Sbjct: 121 LGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL--ENVT 178
Query: 339 SNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVAR-NLKKSG--STPLKFHRK-- 393
+ P+ V GK + ++ YH+ + +G+ K G + L HR
Sbjct: 179 NVCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQ 236
Query: 394 ----IKLHVVSIAAGMVHSTALTE 413
I VV +A G H+ LTE
Sbjct: 237 PVPGIPGKVVQVACGGGHTVVLTE 260
Score = 173 (66.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 56/180 (31%), Positives = 92/180 (51%)
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKY 362
++ ++HTAVV+ + +++ +G N GQLG G+ ++ S P V++LK + + A +
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSK--PTCVKALKPEKVKFAACGRN 97
Query: 363 HTIVLGADGERVIVARNLKKS----GSTPLK--FH--------RKIKLHVVSIAAGMVHS 408
HT+V +G +V A + G T + FH RKIK ++AG S
Sbjct: 98 HTLV-STEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIK----QLSAGSNTS 152
Query: 409 TALTEDGALFYWA-SSDPDLRCQQLYSMC-------GRNVVSISAGKYWTAAVTATGDVY 460
ALTEDG LF W +S+ + + + ++C G+ + IS G Y +A VT G +Y
Sbjct: 153 AALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLY 212
Score = 38 (18.4 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 906 PKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGKVLLSS-FMTS--KPIPVVSA 962
PKG+ S + ++ T NKD + + L+S M S +P+P +
Sbjct: 903 PKGNMHYHAKSSSSEVLNDSESTPNKDVKKSKKIFLFKRMSLMSQKSMQSNNEPLPEIKP 962
Query: 963 RAQQ-ATDGDK 972
Q A G+K
Sbjct: 963 IGDQIAFKGNK 973
Score = 37 (18.1 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 808 DTEITEVSKKKEEDAMSEGNVAIEYSKQSGFLVQKKD 844
D E +++++ +ED S+ NV + + + KKD
Sbjct: 853 DEEPEDMAEELDEDLESKKNVPADVASDNSL---KKD 886
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 181 (68.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 52/182 (28%), Positives = 81/182 (44%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAA 306
R + + H +L G+VF+WG R GQLG+ +++ + PR + +L+ L + VAA
Sbjct: 165 RARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAG 224
Query: 307 NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
H+ VSE+G+++ WG N GQL + A + GK + G A
Sbjct: 225 GWHSVCVSETGDIYIWGWNESGQLALPARSLAED----------GKTITGDAPG------ 268
Query: 367 LGADGERVIVARNLKKSGSTPL----KFHRKIKLHV----VSIAAGMVHSTALTEDGALF 418
L DG A + G TP F + L + V + G H+ +T G L+
Sbjct: 269 LNEDGSEAKRATEGEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELY 328
Query: 419 YW 420
W
Sbjct: 329 TW 330
Score = 165 (63.1 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 57/193 (29%), Positives = 89/193 (46%)
Query: 284 VDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTP 343
V QP R + L+ + +H ++ +G+VF+WG R GQLG+GT + P
Sbjct: 150 VSPQPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAERE--P 207
Query: 344 RVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAA 403
RV+E+L+G + VAA +H++ + G+ I N +SG L R + +I
Sbjct: 208 RVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWN--ESGQLALPA-RSLAEDGKTITG 264
Query: 404 GMVHSTALTEDGALFYWASSDPD------LRCQQLYSMC----GRNVVSISAGKYWTAAV 453
+ L EDG+ A+ D + Q ++ G + V S G TA V
Sbjct: 265 D---APGLNEDGSEAKRATEGEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVV 321
Query: 454 TATGDVYMWD-GK 465
T TG++Y W GK
Sbjct: 322 TRTGELYTWGWGK 334
Score = 145 (56.1 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
A +VFSWG G + QLG G ++ P +++L G + ++A +HSV V+ G++Y WG
Sbjct: 182 AGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWG 241
Query: 214 YGRGGRLGHP 223
+ G+L P
Sbjct: 242 WNESGQLALP 251
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 49/174 (28%), Positives = 74/174 (42%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H++ + + G+V++WG GR G+LGH + A PR V L + +AA H
Sbjct: 175 HALLLDAAGQVFSWGGGRHGQLGHGTLE------AEREPR-VLEALQGLPMAEVAAGGWH 227
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGE 318
+V +E G+++ WG N GQL P R + K I A ++E G
Sbjct: 228 SVCVSETGDIYIWGWNESGQLAL--------PARSLAEDGKTITGDAPG-----LNEDGS 274
Query: 319 VFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
EG+ G T A P +++ G D V + HT V+ GE
Sbjct: 275 EAKRAT--EGEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGE 326
Score = 108 (43.1 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 35/104 (33%), Positives = 54/104 (51%)
Query: 276 EGQLGYTS--VDTQPTPRRVSSLKLKIIAVAAA--NKHTAVVSESGEVFTWGCNREGQLG 331
EG+ G + + QP P + L L AV A+ ++HTAVV+ +GE++TWG + GQLG
Sbjct: 281 EGEDGGPTPFIAVQPFPALLD-LPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 339
Query: 332 YGTSNSASNYTPRVVESLKGKDLV--GVAAAKYHTIVLGADGER 373
+ + S P VE K L V+ ++T V + E+
Sbjct: 340 HKDTTSLDR--PCRVEYFVDKQLQVRTVSCGPWNTYVFAVEKEK 381
Score = 94 (38.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRV 293
LGS VK ++H T + T GE++TWG + GQLG+ + P RV
Sbjct: 304 LGSDAVKASCGSRH-TAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRV 352
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 205 (77.2 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 80/325 (24%), Positives = 143/325 (44%)
Query: 179 PCKVDSLHGFVIKLI--SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVIT 236
P + L G ++ + + HS+ +T+ G++++WG G+LGH D V
Sbjct: 139 PHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD------TKRVEA 192
Query: 237 PRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSS 295
PR + GL + + A ++HT+ TE G VF +G N+ GQLG D P+P ++
Sbjct: 193 PRLI-EGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMY 251
Query: 296 LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV 355
I +A + + ++ G ++++GC GQLG+ NS + R +LV
Sbjct: 252 NGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGH---NSDGKFIARAQRIEYDCELV 308
Query: 356 GVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDG 415
A + I DG+ + V + + + H +V + V S G
Sbjct: 309 PRRVAIF--IEKTKDGQILPVPNVVVRDVACGAN-HT-----LVLDSQKRVFSWGFGGYG 360
Query: 416 ALFYWASSDPDL-RCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK-SKDN--- 470
L + D + R +L+ GR I AG + AV+ G ++ W S+++
Sbjct: 361 RLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMY 420
Query: 471 PPLVTRLHGIKKATSVSVGETHLLI 495
P V L G + S++ G++ +++
Sbjct: 421 PKAVQDLCGWR-IRSLACGKSSIIV 444
Score = 147 (56.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 52/196 (26%), Positives = 85/196 (43%)
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTS-GLGSR 247
V++ ++ H++ + S V++WG+G GRLGH + Q + PR V R
Sbjct: 331 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAE------QKDEMVPRLVKLFDFPGR 384
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
I A + +E G +F WG+ TS ++ P+ V L I A
Sbjct: 385 GASQIYAGYTCSFAVSEVGGLFFWGATN------TSRESTMYPKAVQDLCGWRIRSLACG 438
Query: 308 KHTAVVSESGEVFTWGCNRE-GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
K + +V+ +WG + G+LGYG S+ + V++L G VA H++V
Sbjct: 439 KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLV 498
Query: 367 LGADGERVIVARNLKK 382
+ D E +KK
Sbjct: 499 IARD-ESETEKEKIKK 513
Score = 119 (46.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 35/133 (26%), Positives = 65/133 (48%)
Query: 153 VATE--VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVY 210
+ TE ++SWG QLG G+ + P ++ L VI + + H++A+T G V+
Sbjct: 165 ITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVF 224
Query: 211 TWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT 270
+G + G+LG + + AV +P ++ G K A+ ++ +G +++
Sbjct: 225 AFGENKMGQLG-----LGNQTDAVPSPAQIMYN-GQPITKMACGAEFSMIMDCKGN-LYS 277
Query: 271 WGSNREGQLGYTS 283
+G GQLG+ S
Sbjct: 278 FGCPEYGQLGHNS 290
Score = 69 (29.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/113 (29%), Positives = 53/113 (46%)
Query: 401 IAAGMVHSTALTEDGALFYWASSDPDLRCQQLY-----SMCGRNVVSISAGK--YWTAAV 453
I AG S A++E G LF+W +++ R +Y +CG + S++ GK AA
Sbjct: 389 IYAGYTCSFAVSEVGGLFFWGATNTS-RESTMYPKAVQDLCGWRIRSLACGKSSIIVAAD 447
Query: 454 TAT---------GDVYMWDGK-KSKDNPPLVTRLHGIKKATSVSVGETHLLIV 496
+T G++ D K KS V L GI + V++G +H L++
Sbjct: 448 ESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIF-SEQVAMGYSHSLVI 499
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 201 (75.8 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 52/175 (29%), Positives = 80/175 (45%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAA 306
RV+ + H +L E G+VF+WG R GQLG+ S++ + PR + +L+ L++ VAA
Sbjct: 162 RVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAG 221
Query: 307 NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRV-VESLKGKDLVGVAAAKYHTI 365
H+ VSE+G+++ WG N GQL T + T R L L G AA
Sbjct: 222 GWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELNDDGLRGEEAALAD-- 279
Query: 366 VLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW 420
+GA + + P + V + G H+ +T G L+ W
Sbjct: 280 -VGAPAHFIAIQ-------PFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTW 326
Score = 168 (64.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 50/175 (28%), Positives = 85/175 (48%)
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
+L++ + +H ++ E+G+VF+WG R GQLG+G+ + PR++E+L+G +
Sbjct: 160 ELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEA--ELEPRLLEALQGLRMAE 217
Query: 357 VAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALT-EDG 415
VAA +H++ + G+ I N +SG L + V A ++ L E+
Sbjct: 218 VAAGGWHSVCVSETGDIYIWGWN--ESGQLALPTRSGTEKKTVREEATELNDDGLRGEEA 275
Query: 416 ALFYWASSDPDLRCQQLYSMC----GRNVVSISAGKYWTAAVTATGDVYMWD-GK 465
AL + + Q ++ G + V S G TA VT TG++Y W GK
Sbjct: 276 ALADVGAPAHFIAIQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGK 330
Score = 141 (54.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
A +VFSWG G + QLG G+ + P +++L G + ++A +HSV V+ G++Y WG
Sbjct: 179 AGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWG 238
Query: 214 YGRGGRLGHP 223
+ G+L P
Sbjct: 239 WNESGQLALP 248
Score = 134 (52.2 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H++ + G+V++WG GR G+LGH + A + PR + L R+ +AA H
Sbjct: 172 HALLLCEAGQVFSWGGGRHGQLGHGSLE------AELEPR-LLEALQGLRMAEVAAGGWH 224
Query: 259 TVLATEGGEVFTWGSNREGQL 279
+V +E G+++ WG N GQL
Sbjct: 225 SVCVSETGDIYIWGWNESGQL 245
Score = 108 (43.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 32/92 (34%), Positives = 48/92 (52%)
Query: 287 QPTPRRVSSLKLKIIAVAAA--NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPR 344
QP P + L L AV A+ ++HTAVV+ +GE++TWG + GQLG+ S S+ P
Sbjct: 290 QPFPALLD-LPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQ--PC 346
Query: 345 VVESLKGKDLV--GVAAAKYHTIVLGADGERV 374
VE + L V ++T V + E +
Sbjct: 347 RVEYFVERQLEVRAVTCGPWNTYVYAVERENI 378
Score = 97 (39.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL---KLKI 300
LGS VK ++H T + T GE++TWG + GQLG+ + P RV +L++
Sbjct: 300 LGSDAVKASCGSRH-TAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEV 358
Query: 301 IAVAAANKHTAVVSESGE 318
AV +T V + E
Sbjct: 359 RAVTCGPWNTYVYAVERE 376
Score = 45 (20.9 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 229 SGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
+GQ AV +P + + + V ++A+ +T L T GG V GS
Sbjct: 25 NGQHAVHSPEPLHA---ADDVCQVSASWSYTALVTRGGRVELSGS 66
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 181 (68.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 50/163 (30%), Positives = 81/163 (49%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G+VY G G+LG D D S + TS ++K ++A + + T G
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISF---FTS---QHKIKQLSAGSNTSAALTAEG 56
Query: 267 EVFTWGSNREGQLGYTS--VDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGC 324
E++T+G G+LG + P+ V + K+I VA HT V++E V+T+G
Sbjct: 57 ELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA-VYTFGL 115
Query: 325 NREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
+ GQLG GT ++ P+V+ES+K K + V + HT ++
Sbjct: 116 GQFGQLGLGTFTFETS-EPKVIESVKDKKISHVCCGENHTALI 157
Score = 145 (56.1 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 51/164 (31%), Positives = 83/164 (50%)
Query: 156 EVFSWGSGANYQLGTGNAHLQK---LPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTW 212
+V++ G QLG G+ + L S H IK +SA S A+T+ GE+YT+
Sbjct: 4 QVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IKQLSAGSNTSAALTAEGELYTF 61
Query: 213 GYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWG 272
G G+LG P + + + + P G+ S +V +A HTV+ TE V+T+G
Sbjct: 62 GEPESGKLGLPPKLLVNHKVPQLVP-----GI-SEKVIQVACGGGHTVVLTEKA-VYTFG 114
Query: 273 SNREGQLGYTSVDTQPT-PRRVSSLKLKIIA-VAAANKHTAVVS 314
+ GQLG + + + P+ + S+K K I+ V HTA+++
Sbjct: 115 LGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALIT 158
Score = 128 (50.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 265 GGEVFTWGSNREGQLGYTSVDTQPTPRRVS--SLKLKIIAVAAANKHTAVVSESGEVFTW 322
GG+V+ G N EGQLG D + +S + + KI ++A + +A ++ GE++T+
Sbjct: 2 GGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTF 61
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
G G+LG ++ P++V + K ++ VA HT+VL
Sbjct: 62 GEPESGKLGLPPKLLVNHKVPQLVPGISEK-VIQVACGGGHTVVL 105
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 83/307 (27%), Positives = 129/307 (42%)
Query: 147 GSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLISAAKFHSVAVTS 205
G + + +++WG+ + QLG GNA Q P +V+S L I+ ++ HS ++
Sbjct: 29 GDQLSKCVSLLYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISD 88
Query: 206 LGEVYTWGYGRGGRLG--HPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLAT 263
GE+ G G+LG H +I + Q + P G G RV+ ++ T++ T
Sbjct: 89 SGELLVCGQNHKGQLGLGHT-LEIMTFQTCPL-P-----GFG--RVQQVSCGWDFTIILT 139
Query: 264 EGGEVFTWGSNREGQLGYTSVDTQPT-PRRVSSLKLKIIAVAAANKHTAVVSESGEVFTW 322
G V GSN GQLG ++ T P + S + +VAA +H + SG V+ W
Sbjct: 140 GDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEPVTSVAAGLRHALASTASGCVYQW 199
Query: 323 GC----NREGQLG-YGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA 377
G + + L + S+ P +V V A H L +GE +
Sbjct: 200 GTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWG 259
Query: 378 RNLKK---SGST----PLKFHRKIKL--HVVSIAAGMVHSTALTEDGALFYWASSDPDLR 428
N SGS P+ R + V + +G H A TE G +F W S+
Sbjct: 260 SNKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQL 319
Query: 429 CQQLYSM 435
Q +SM
Sbjct: 320 GQTNHSM 326
Score = 186 (70.5 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 71/276 (25%), Positives = 116/276 (42%)
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATEVFSWGSG---- 163
FG L V++ S + L+ PV ++ + + S + V+ WG+G
Sbjct: 152 FGQLGVSAEKTHSAEPLLLKSFHE--PVTSVAAGLRHALASTASGC---VYQWGTGLSSH 206
Query: 164 ANYQLGTGN--AHLQ-KLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRL 220
A L +HL K PC V + + A H +T GE++ WG + G+L
Sbjct: 207 AKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQL 266
Query: 221 GHPDFDIHSGQAAVITPRRVT-SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQL 279
SG + P + S L RV + + H V TE G VFTWG + GQL
Sbjct: 267 -------ISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQL 319
Query: 280 GYT--SVDTQPTPRRV--SSLKLKII----AVAAANKHTAVVSESGEVFTWGCNREGQLG 331
G T S++ Q + S +++K + ++ ++H V G VF+WG N G G
Sbjct: 320 GQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVV-GGRVFSWGWNEHGMCG 378
Query: 332 YGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
G+ + P+ + +L + + H++ L
Sbjct: 379 DGSLQDITQ--PQPIPALADAVALLIGCGAGHSMAL 412
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 195 (73.7 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 49/174 (28%), Positives = 82/174 (47%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAA 306
R + + H +L G+VF+WG+ R GQLG+ +++ +P PR + +L+ L++ VAA
Sbjct: 160 RARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAG 219
Query: 307 NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
H+ +SE+G+++ WG N GQL T + A + E+ G + G +
Sbjct: 220 GWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEA-SGLEEDGSEVKR----- 273
Query: 367 LGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW 420
G+ GE A + P V ++ G H+ LT G L+ W
Sbjct: 274 -GSAGEDGAPAPFIAVQ-PFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTW 325
Score = 173 (66.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
+H ++ +G+VF+WG R GQLG+GT + PR++E+L+G + VAA +H++ L
Sbjct: 169 EHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPE--PRLLEALQGLRMAEVAAGGWHSVCL 226
Query: 368 GADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDL 427
G+ I N + P K + A+G+ + + G+ + P +
Sbjct: 227 SETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEASGLEEDGSEVKRGSAGEDGAPAPFI 286
Query: 428 RCQQLYSMC----GRNVVSISAGKYWTAAVTATGDVYMWD-GK 465
Q ++ G V +S G TA +T TG++Y W GK
Sbjct: 287 AVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGK 329
Score = 139 (54.0 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
A +VFSWG+G + QLG G + P +++L G + ++A +HSV ++ G++Y WG
Sbjct: 177 AGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWG 236
Query: 214 YGRGGRLGHP 223
+ G+L P
Sbjct: 237 WNESGQLALP 246
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/174 (27%), Positives = 74/174 (42%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H++ + + G+V++WG GR G+LGH + A PR + L R+ +AA H
Sbjct: 170 HALLLDAAGQVFSWGAGRHGQLGHGTLE------AEPEPR-LLEALQGLRMAEVAAGGWH 222
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGE 318
+V +E G+++ WG N GQL PT K A + + + + E
Sbjct: 223 SVCLSETGDIYIWGWNESGQLAL------PTKSLAEDGK------TTAGEASGLEEDGSE 270
Query: 319 VFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
V G+ G A P +++ G + V V+ HT VL GE
Sbjct: 271 VKRGSA---GEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGE 321
Score = 110 (43.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 41/148 (27%), Positives = 67/148 (45%)
Query: 229 SGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQP 288
SGQ A+ T G KT A + L +G EV + +G + QP
Sbjct: 240 SGQLALPTKSLAEDG------KTTAGEA--SGLEEDGSEVKRGSAGEDGAPA-PFIAVQP 290
Query: 289 TPRRVS-SLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE 347
P + S + + V+ ++HTAV++ +GE++TWG + GQLG+ + + P VE
Sbjct: 291 FPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDR--PCRVE 348
Query: 348 SLKGKDLV--GVAAAKYHTIVLGADGER 373
K L V+ ++T V + E+
Sbjct: 349 YFVDKQLQVRTVSCGPWNTYVYAVEKEK 376
Score = 45 (20.9 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 213 GYGR--GGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEV 268
G+G+ G LG +HS + P R T G GS V ++A+ +T T GG V
Sbjct: 16 GFGQALGSGLGR---QVHSPE-----PLR-TPG-GSLGVCRVSASWSYTAFVTRGGRV 63
Score = 45 (20.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 288 PTPRRVSSLKLKIIAVAAANKHTAVVSESGEV 319
P P R L + V+A+ +TA V+ G V
Sbjct: 32 PEPLRTPGGSLGVCRVSASWSYTAFVTRGGRV 63
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 204 (76.9 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 68/254 (26%), Positives = 121/254 (47%)
Query: 139 SGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
SG ++ V G + + T+ + ++GSG+N LG G+ + P V++L G+ + +
Sbjct: 397 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQV 456
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
+ H +A+++ E++ WG G GGRLG + H P+ V G + +
Sbjct: 457 ACGASHVLALSTERELFAWGRGDGGRLGLGTRESHC------CPQLVPMPPGQEAQRVVC 510
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYT--SVDTQPTPRR----------VSSLKLK-- 299
+L T G+ GSNR +LG S+ +P P + + S L
Sbjct: 511 GIDSSMIL-TVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQE 569
Query: 300 -IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
+++V H+ +++ SG+ +T+G N+ GQLG T+ + P V+ L+G + VA
Sbjct: 570 PLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLG--TNARRVSRAPCRVQGLQGIKISTVA 627
Query: 359 AAKYHTIVLGADGE 372
T+ +GA+GE
Sbjct: 628 CGDAFTVAIGAEGE 641
Score = 192 (72.6 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 63/221 (28%), Positives = 98/221 (44%)
Query: 125 TLEDCKSRTPVDLLSG-PVLQVV-GSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLP 179
+L D T V+ L G ++QV G+ + S E+F+WG G +LG G P
Sbjct: 435 SLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCP 494
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDI------HSG--Q 231
V G + + S+ +T G+ G R +LG + H +
Sbjct: 495 QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEE 554
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPR 291
A TP ++ L + ++ H++L T G+ +T+GSN+ GQLG + P
Sbjct: 555 AVTFTPLG-SAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPC 613
Query: 292 RVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
RV L+ +KI VA + T + GEVF+WG G+LG
Sbjct: 614 RVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG 654
Score = 163 (62.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 56/215 (26%), Positives = 92/215 (42%)
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG---YGRGGRLGHPDFDIHSGQAAVI 235
P ++ L+ V++ ++A + VT G + W G GG P I Q +
Sbjct: 332 PLRLPMLNTEVVQ-VAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGA-IEQPQPQFV 389
Query: 236 TPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS 295
+ R G +K +A T T+ G + T+GS G LG+ S++ P V +
Sbjct: 390 S--RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEA 447
Query: 296 LK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDL 354
L +++ VA H +S E+F WG G+LG GT S + P++V G++
Sbjct: 448 LLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRES--HCCPQLVPMPPGQEA 505
Query: 355 VGVAAAKYHTIVLGADGERVIVARN-LKKSGSTPL 388
V +++L G+ + N K G PL
Sbjct: 506 QRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPL 540
Score = 146 (56.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 33/97 (34%), Positives = 54/97 (55%)
Query: 134 PVDLLSGPVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFV 189
P+D P+L V +G ++ + T + +++GS + QLGT + + PC+V L G
Sbjct: 565 PLD--QEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIK 622
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFD 226
I ++ +VA+ + GEV++WG G GRLG D D
Sbjct: 623 ISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDED 659
Score = 113 (44.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 47/167 (28%), Positives = 73/167 (43%)
Query: 206 LGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEG 265
L VYTWG G L P + Q A R +G+ +R + I L G
Sbjct: 319 LSSVYTWGGGLSAPLRLPMLNTEVVQVAA--GRTQKAGV-TRSGRLILWEA--PPLGAGG 373
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCN 325
G + G+ + Q + S + S + +K VA + TA +++ G + T+G
Sbjct: 374 GALLP-GAIEQPQPQFVSRFLEGQ----SGVTIK--HVACGDLFTACLTDRGIIMTFGSG 426
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G LG+G+ N S P +VE+L G ++V VA H + L + E
Sbjct: 427 SNGCLGHGSLNDISQ--PTIVEALLGYEMVQVACGASHVLALSTERE 471
Score = 64 (27.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 27/113 (23%), Positives = 51/113 (45%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASSD-----PDLR------CQQLYSMCGRNVVSISAG 446
++S+ G HS LT G + + S+ + R C+ + + G + +++ G
Sbjct: 571 LLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCR-VQGLQGIKISTVACG 629
Query: 447 KYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLIVGSL 499
+T A+ A G+V+ W GK ++ G+ + V + ETH V S+
Sbjct: 630 DAFTVAIGAEGEVFSW-GKGARGRLGRKDEDAGLPRP--VQLDETHPYTVTSV 679
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 190 (71.9 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 80/323 (24%), Positives = 136/323 (42%)
Query: 157 VFSWGSGANYQLGTGNA-HL--QKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
+++WG G TGN H +K P L + +S HS A+ + E WG
Sbjct: 4 LYTWGKGK-----TGNTCHNIDKKYPSPPSVLISLNLDQLSMGPNHSAAIVN-NECLMWG 57
Query: 214 YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
G + H+ ++ RRV S ++ +HT+L T ++F+ G
Sbjct: 58 EVMGRK--------HTTLFKIVWKRRVVS---------VSCGFNHTLLLTSEYKIFSMGF 100
Query: 274 NREGQLGYTSVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
N+ GQLG +V P V +L K +I + A N +A ++E+G+++ WG + GQLG
Sbjct: 101 NQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGN 160
Query: 333 GTSNSA-SNYTPRVV------ESLKGKDL------VGVAAAKYHTIVLGADGERVIVARN 379
G N+ ++TP + ++ K + + HTI + G I +
Sbjct: 161 GKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTG--AIFSWG 218
Query: 380 LKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRN 439
+ G L H KL V I +L ++D + ++ R
Sbjct: 219 SNQYGQLGLG-HCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTD--FTAKTIH----RI 271
Query: 440 VVSISAGKYWTAAVTATGDVYMW 462
VV I+ G + +A +T GD+++W
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLW 294
Score = 163 (62.4 bits), Expect = 3.0e-11, Sum P(4) = 3.0e-11
Identities = 42/108 (38%), Positives = 62/108 (57%)
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVS-SLK-LKIIAV 303
R V IA H+ L T G++F WGSN+ GQLG S+D Q P+ V SL+ +KI +
Sbjct: 270 RIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLD-QSVPKTVKGSLEFVKINRM 328
Query: 304 AAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASN-YTPRVVESLK 350
A N HT ++++ +VFT+G N QLG+G+ + Y P ++ K
Sbjct: 329 ALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKPK 376
Score = 151 (58.2 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 41/143 (28%), Positives = 65/143 (45%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
++FS G QLG N +P VD+L F + I A S A+T G++Y WG
Sbjct: 94 KIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSS 153
Query: 216 RGGRLGHPDFD--IHS-GQAAVITP-----RRVTSGLGSRRVKTIAAAKHHTVLATEGGE 267
G+LG+ + +HS ++ P + + + I HT+ + G
Sbjct: 154 AYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGA 213
Query: 268 VFTWGSNREGQLGYTSVDTQPTP 290
+F+WGSN+ GQLG + + P
Sbjct: 214 IFSWGSNQYGQLGLGHCNAKLVP 236
Score = 109 (43.4 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE-SLKGKDLVGVA 358
++ +A N H+A+++ G++F WG N+ GQLG G S S P+ V+ SL+ + +A
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQS--VPKTVKGSLEFVKINRMA 329
Query: 359 AAKYHTIVL 367
HTI+L
Sbjct: 330 LGNNHTILL 338
Score = 84 (34.6 bits), Expect = 3.0e-11, Sum P(4) = 3.0e-11
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 134 PVDLLSG-PVLQV-VGSGYNSVATE---VFSWGSGANYQLGTG--NAHLQKL-PCKV--- 182
PVD LS V+++ G+ ++ TE ++ WGS A QLG G NA L P +
Sbjct: 119 PVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNP 178
Query: 183 --------DSLH-GFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
D ++ I H++A+++ G +++WG + G+LG
Sbjct: 179 LIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLG 226
Score = 67 (28.6 bits), Expect = 2.4e-08, Sum P(4) = 2.4e-08
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASS 423
VV IA G HS LT +G LF W S+
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSN 297
Score = 62 (26.9 bits), Expect = 4.4e-09, Sum P(4) = 4.4e-09
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 152 SVATEVFSWGSGANYQLGTG--NAHLQKLPCKVDS 184
S +FSWGS QLG G NA L +P +D+
Sbjct: 209 STTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDN 243
Score = 58 (25.5 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 978 AASGTPPSLSRPSLRNIQMQQGKQHCLSHSPKTRTAGFSIAPSQGSPS 1025
++S TPP +S PS+ I +Q S K + ++PS SPS
Sbjct: 1548 SSSNTPPIVSSPSVNTITPKQSPSSKSIQSLKNESEFICVSPS--SPS 1593
Score = 45 (20.9 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 503 IYPPNVAKNPQKLKLNGRNDLEEFYEDFMFNDESNN 538
I+ V N +K+KLN N+ + N+ +NN
Sbjct: 937 IHSVKVLSNHRKIKLNNNNNNNNNNNNNNNNNNNNN 972
Score = 40 (19.1 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 9/44 (20%), Positives = 19/44 (43%)
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVV 346
+ + NKH ++ V TW CN + +++ P ++
Sbjct: 438 MGSTNKHLSIF-----VGTWNCNAKRTQNLANWILTNSFAPDII 476
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 200 (75.5 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 75/303 (24%), Positives = 133/303 (43%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
HS+ +T+ G++++WG G+LGH D + P+ + GLG + A ++H
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGD------TKRLEAPKLI-EGLGEEVIVAAACGRNH 186
Query: 259 TVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESG 317
T+ TE G V+T+G N+ GQLG D +P + I+ VA + + +V G
Sbjct: 187 TLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKG 246
Query: 318 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA 377
++++GC GQLG+ NS + R +L+ A + I DG+ + V
Sbjct: 247 NLYSFGCPEYGQLGH---NSDGKFIARAQRIEFDCELIPRRVAIF--IEKTKDGQVLPVP 301
Query: 378 RNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDL-RCQQLYSMC 436
+ + + H +V + V S G L + D + R +L+
Sbjct: 302 NVVARDVACGAN-HT-----LVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFP 355
Query: 437 GRNVVSISAGKYWTAAVTATGDVYMWD----GKKSKDNPPLVTRLHGIKKATSVSVGETH 492
GR I G + A++ G ++ W ++S P V L G K S++ G++
Sbjct: 356 GRGATQIYCGYQCSFALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWK-IRSLACGKSS 414
Query: 493 LLI 495
+++
Sbjct: 415 IIV 417
Score = 169 (64.5 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 37/118 (31%), Positives = 65/118 (55%)
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANK-HTAVV 313
A H ++ TEG ++++WG N +GQLG+ P+ + L ++I AA + HT +
Sbjct: 132 AAHSLIITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLAL 190
Query: 314 SESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
+E+G V+T+G N+ GQLG G A +P ++ G+ +V VA ++++ G
Sbjct: 191 TENGTVYTFGENKLGQLGQGNQTDAV-LSPATIQ-YNGQPIVKVACGAEFSMIVDCKG 246
Score = 135 (52.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 47/181 (25%), Positives = 78/181 (43%)
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTS-GLGSR 247
V + ++ H++ + S V++WG+G GRLGH + Q + PR V R
Sbjct: 304 VARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAE------QKDEMVPRLVKLFDFPGR 357
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
I + +E G +F WG TS ++ P+ V L I A
Sbjct: 358 GATQIYCGYQCSFALSEMGGLFFWGVTN------TSRESTMYPKAVQDLCGWKIRSLACG 411
Query: 308 KHTAVVSESGEVFTWGCNRE-GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
K + +V+ +WG + G+LGYG + S+ T + V++L G V H++V
Sbjct: 412 KSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLV 471
Query: 367 L 367
+
Sbjct: 472 I 472
Score = 129 (50.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 43/156 (27%), Positives = 74/156 (47%)
Query: 129 CKSRTPVD-LLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHG 187
C S V ++SGP S + +++SWG QLG G+ + P ++ L
Sbjct: 117 CLSDVQVSCVVSGPC--AAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGE 174
Query: 188 FVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
VI + + H++A+T G VYT+G + G+LG + AV++P + G
Sbjct: 175 EVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGN-----QTDAVLSPATIQYN-GQP 228
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTS 283
VK A+ ++ +G ++++G GQLG+ S
Sbjct: 229 IVKVACGAEFSMIVDCKGN-LYSFGCPEYGQLGHNS 263
Score = 112 (44.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 20/79 (25%), Positives = 44/79 (55%)
Query: 293 VSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGK 352
+S +++ + H+ +++ G++++WG N +GQLG+G + P+++E L +
Sbjct: 118 LSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLE--APKLIEGLGEE 175
Query: 353 DLVGVAAAKYHTIVLGADG 371
+V A + HT+ L +G
Sbjct: 176 VIVAAACGRNHTLALTENG 194
Score = 67 (28.6 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 31/112 (27%), Positives = 50/112 (44%)
Query: 401 IAAGMVHSTALTEDGALFYWA----SSDPDLRCQQLYSMCGRNVVSISAGK--YWTAAVT 454
I G S AL+E G LF+W S + + + + +CG + S++ GK AA
Sbjct: 362 IYCGYQCSFALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADD 421
Query: 455 AT---------GDVYMWDGK-KSKDNPPLVTRLHGIKKATSVSVGETHLLIV 496
+T G++ D K KS V L G+ + V +G +H L++
Sbjct: 422 STISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVY-SEQVVMGYSHSLVI 472
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 186 (70.5 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 71/279 (25%), Positives = 123/279 (44%)
Query: 139 SGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHG-FVIKLISAAK 197
+G V + + S ++EV+ WG G + P K+D G + + + A
Sbjct: 313 TGTVTEAPIAVVTSRSSEVYVWGGG------------KTTPQKLDVFKGGWRARQVCAGD 360
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
H VT E+YTW +GG H H +A+ P+ V L + V+ ++
Sbjct: 361 AHFAVVTVEKELYTWVNMQGGSKLHGQLG-HGDRASYRQPKHVEK-LQGKSVQKVSCGSD 418
Query: 258 HTVLATEGGEVFTWGSNREGQLGYT-SVDTQPT-PRRVSS-LKLKIIAVAAANKHTAVVS 314
TV T+ G+++++GS+ G LG S ++ P V L + V+ + H ++
Sbjct: 419 FTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALT 478
Query: 315 ESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
S V++WGC G+LG + + Y+P+ VE +G +V V G+DG +
Sbjct: 479 RSKSVYSWGCGEYGRLGLDSEDDV--YSPQKVEVQRGLCIVNVCC--------GSDGSFL 528
Query: 375 IVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTE 413
+ K + L H K+ L+ AG+++ A E
Sbjct: 529 LTLTG--KVLACGLNEHNKLGLN--QYTAGIINHEAFQE 563
Score = 176 (67.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 74/299 (24%), Positives = 126/299 (42%)
Query: 152 SVATEVFSW-----GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V E+++W GS + QLG G+ + P V+ L G ++ +S +V +T
Sbjct: 367 TVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDE 426
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G++Y++G G LG S + V+ P V L + V ++ H + T
Sbjct: 427 GQLYSFGSDYYGCLGVNQ----SAGSEVLEPLLVDFFL-NEPVDQVSCGDSHIMALTRSK 481
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCN 325
V++WG G+LG S D +P++V + L I+ V + + +++ +G+V G N
Sbjct: 482 SVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLN 541
Query: 326 REGQLG---Y--GTSN-SASNYTPRVVESLKGKDLV-----GVAAAKYHTIVLGADGERV 374
+LG Y G N A P K L ++ + HT + G +
Sbjct: 542 EHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLL 601
Query: 375 IVARNLKKSGSTPLKFHRK---IKL--------HVVSIAAGMVHSTALTEDGALFYWAS 422
N K G + +RK I L V+ ++ G +TA T D +F W +
Sbjct: 602 TFGSN--KCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGN 658
Score = 158 (60.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 79/282 (28%), Positives = 119/282 (42%)
Query: 135 VDLLSGPVLQVV--GSGYNSVATE---VFSWGSGANYQLGTG-NAHLQKL-PCKVDSLHG 187
V+ L G +Q V GS + T+ ++S+GS LG +A + L P VD
Sbjct: 402 VEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLN 461
Query: 188 FVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG-HPDFDIHSGQAAVITPRRVTSGLGS 246
+ +S H +A+T VY+WG G GRLG + D++S Q V GL
Sbjct: 462 EPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKV-----EVQRGLC- 515
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG---YTS-VDTQPTPRRV---SSLKL- 298
+ + + L T G+V G N +LG YT+ + + V +SL L
Sbjct: 516 --IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLA 573
Query: 299 ------KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGT--SNSASNYT--P----R 344
KI +++ HTA + E G + T+G N+ GQLG G + N P +
Sbjct: 574 KQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQ 633
Query: 345 VVESLKGKDLVGVAAAKYHTIVLGADGE-RVIVARNLKKSGS 385
V+ G + A A H G G R+ + N + GS
Sbjct: 634 VIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGS 675
Score = 69 (29.3 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 385 STPLKFHRKIKLHVV-SIAAGMVHSTALTEDGALFYWASSDPDLRCQQL----YS----- 434
+T L +++ + + SI+ G H+ A+ E G L + S+ +C QL Y
Sbjct: 567 TTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSN----KCGQLGVGDYRKHLGI 622
Query: 435 ------MCGRNVVSISAGKYWTAAVTATGDVYMW 462
+ G+ V+ +S G +T A TA ++ W
Sbjct: 623 NLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAW 656
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 197 (74.4 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 78/325 (24%), Positives = 142/325 (43%)
Query: 179 PCKVDSLHGFVIKLI--SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVIT 236
P + L G ++ + + HS+ +T+ G++++WG G+LGH D V
Sbjct: 137 PHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD------TKRVEA 190
Query: 237 PRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSS 295
PR + + L + A ++HT+ T+ G VF +G N+ GQLG D P+P ++
Sbjct: 191 PRLIEA-LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMY 249
Query: 296 LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV 355
I +A + + ++ G ++++GC GQLG+ NS + R +LV
Sbjct: 250 NGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGH---NSDGKFIARAQRIEYDCELV 306
Query: 356 GVAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDG 415
A + I DG+ + V + + + H +V + V S G
Sbjct: 307 PRRVAIF--IEKTKDGQILPVPNVVVRDVACGAN-HT-----LVLDSQKRVFSWGFGGYG 358
Query: 416 ALFYWASSDPDL-RCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK-SKDN--- 470
L + D + R +L+ GR I AG + AV+ G ++ W S+++
Sbjct: 359 RLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMY 418
Query: 471 PPLVTRLHGIKKATSVSVGETHLLI 495
P V L G + S++ G++ +++
Sbjct: 419 PKAVQDLCGWR-IRSLACGKSSIIV 442
Score = 145 (56.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 49/184 (26%), Positives = 81/184 (44%)
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTS-GLGSR 247
V++ ++ H++ + S V++WG+G GRLGH + Q + PR V R
Sbjct: 329 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAE------QKDEMVPRLVKLFDFPGR 382
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
I A + +E G +F WG+ TS ++ P+ V L I A
Sbjct: 383 GATQIYAGYTCSFAVSEVGGLFFWGATN------TSRESTMYPKAVQDLCGWRIRSLACG 436
Query: 308 KHTAVVSESGEVFTWGCNRE-GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
K + +V+ +WG + G+LGYG S+ + V++L G VA H++V
Sbjct: 437 KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLV 496
Query: 367 LGAD 370
+ D
Sbjct: 497 IARD 500
Score = 123 (48.4 bits), Expect = 0.00062, P = 0.00062
Identities = 40/153 (26%), Positives = 75/153 (49%)
Query: 138 LSGPVLQVVGSGYNS-----VATE--VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVI 190
LSG ++ V SG + + TE ++SWG QLG G+ + P +++L I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAI 202
Query: 191 KLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVK 250
L + + H++A+T G V+ +G + G+LG + + AV +P ++ + +
Sbjct: 203 VLAACGRNHTLALTDTGSVFAFGENKMGQLG-----LGNQTDAVPSPAQIM--YNGQPIT 255
Query: 251 TIAAAKHHTVLATEGGEVFTWGSNREGQLGYTS 283
+A ++L G ++++G GQLG+ S
Sbjct: 256 KMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNS 288
Score = 48 (22.0 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 21/83 (25%), Positives = 33/83 (39%)
Query: 9 HGQKQTLQSPARKSSLGGVQKDLCLAVREGSLA--DVESALALLKKNGGNINSRNIFGLT 66
HG + +++P +L L R +LA D S A + G + N
Sbjct: 182 HGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAV 241
Query: 67 PLHSAIWRNQVPIVRRLLAAGAD 89
P + I N PI + +A GA+
Sbjct: 242 PSPAQIMYNGQPITK--MACGAE 262
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 189 (71.6 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 51/152 (33%), Positives = 76/152 (50%)
Query: 185 LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRG--GRLGHPDFDIHSGQAAVITPRRVTS 242
LH + I+A H+VA T+ G V+ WG G GR P + A P RVT
Sbjct: 14 LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAK-EPSRVT- 71
Query: 243 GLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS---LKLK 299
GL + + + A H+ T+ GEV+ WGSN+ GQL + P P+++ + K
Sbjct: 72 GLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFL-PVPQKIEAHCFQNEK 130
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
+ A+ + H +E+G++FTWG GQLG
Sbjct: 131 VTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 162
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 66/239 (27%), Positives = 103/239 (43%)
Query: 157 VFSWGSG---ANYQLGTGNA----HLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEV 209
VF WG+G +L G K P +V L + A HS ++T GEV
Sbjct: 38 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEV 97
Query: 210 YTWGYGRGGRLGHPDFDIHSGQAAVI-TPRRVTSG-LGSRRVKTIAAAKHHTVLATEGGE 267
Y WG + G+L + +AA + P+++ + + +V I + H V TE G+
Sbjct: 98 YVWGSNKHGQLAN--------EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGK 149
Query: 268 VFTWGSNREGQLG-----YTS--VDTQ----PTPRRVSSLKLK------IIAVAAANKHT 310
+FTWG GQLG Y ++ Q P R +S+ V+ ++H
Sbjct: 150 MFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHN 209
Query: 311 AVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKD--LVGVAAAKYHTIVL 367
+ G ++WG N G G GT A+ + P+ V++L LVG A H++ L
Sbjct: 210 LAII-GGVCYSWGWNEHGMCGDGTE--ANVWAPKPVQALLSSSGLLVGCGAG--HSLAL 263
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 236 TPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG---QL--GYTS--VDTQP 288
+P L +V IAA H V AT G VF WG+ +L G T T
Sbjct: 6 SPESCCHMLHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAK 65
Query: 289 TPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
P RV+ L+ K + V A + H+A ++++GEV+ WG N+ GQL
Sbjct: 66 EPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL 108
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 157 (60.3 bits), Expect = 7.2e-12, Sum P(3) = 7.2e-12
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
++F WG G N G+ H+ + P +V L+ I +S H++ ++ G++Y+WG
Sbjct: 11 QIFYWGRGVNQ----GDKHIIE-PIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSS 65
Query: 216 RG-GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G+LGH D G+ I + L V ++ T + T+ G ++ WGSN
Sbjct: 66 NSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSN 125
Query: 275 REGQL 279
EGQL
Sbjct: 126 IEGQL 130
Score = 144 (55.7 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 227 IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS-NREGQLGYTSVD 285
++ G +I P V L + + ++ HT++ ++ G++++WGS N GQLG+
Sbjct: 19 VNQGDKHIIEPIEVPE-LNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSK 77
Query: 286 TQ-PTPRRVSSLKL-------KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYG 333
Q P+ + L +I V+ T V+++ G ++ WG N EGQL G
Sbjct: 78 NQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Score = 137 (53.3 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 47/177 (26%), Positives = 80/177 (45%)
Query: 155 TEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
T+V S+G G+N G +L D ++ I IS H +A++ VY+WG
Sbjct: 337 TKVLSFG-GSNDNNFLGGVINNELQMMTDQMNSIKIIQISCGSNHILALSDQYHVYSWGS 395
Query: 215 GRGGRLGH-PDFDIHSGQAAVI-TPRRVTSGLGSRRVKTIAAAK--HHTVLATEGGEVFT 270
G+LGH D+ S I +P+++ S L + V I+ + H + T + T
Sbjct: 396 AEHGKLGHGEDYSFVSQNPRWINSPKKIKS-LQEKGVTVISVSSGYSHCMALTLDSGILT 454
Query: 271 WGSNREGQLGYTSVDTQPTP---RRVSSLKLKIIAVAAANKHTAVVS-ESGEVFTWG 323
WG +GQLG +P +RV KI+ + ++ ++ E E++ +G
Sbjct: 455 WGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITLEKRELYQFG 511
Score = 126 (49.4 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 37/142 (26%), Positives = 74/142 (52%)
Query: 240 VTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG----YTSVDTQP----TPR 291
+T + S ++ I+ +H + ++ V++WGS G+LG Y+ V P +P+
Sbjct: 362 MTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPK 421
Query: 292 RVSSLKLK---IIAVAAANKHT-AVVSESGEVFTWGCNREGQLGYGTSNSA-SNYT-PRV 345
++ SL+ K +I+V++ H A+ +SG + TWG +GQLG G + S + RV
Sbjct: 422 KIKSLQEKGVTVISVSSGYSHCMALTLDSG-ILTWGKGSDGQLGTGFRHDIWSPFEIKRV 480
Query: 346 VESLKGKDLVGVAAAKYHTIVL 367
++ K + +V + +++ +
Sbjct: 481 ID--KNEKIVQICCGYFNSFFI 500
Score = 98 (39.6 bits), Expect = 7.2e-12, Sum P(3) = 7.2e-12
Identities = 30/108 (27%), Positives = 53/108 (49%)
Query: 272 GSNREGQLG-YTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
GSN LG + + Q +++S+K II ++ + H +S+ V++WG G+L
Sbjct: 344 GSNDNNFLGGVINNELQMMTDQMNSIK--IIQISCGSNHILALSDQYHVYSWGSAEHGKL 401
Query: 331 GYGTSNSASNYTPR------VVESL--KGKDLVGVAAAKYHTIVLGAD 370
G+G S + PR ++SL KG ++ V++ H + L D
Sbjct: 402 GHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLD 449
Score = 70 (29.7 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 299 KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS------NYTPRVVESLKGK 352
+I +++ HT +++E+GE + G GQLG +S+ NY P V+ +L
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNY-PTVIPALLPY 623
Query: 353 DLVGVAAAKYHTIVL 367
+ V ++H++ +
Sbjct: 624 FVESVQCGRWHSVAI 638
Score = 55 (24.4 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWAS-SDPDL 427
V+S+++G H ALT D + W SD L
Sbjct: 433 VISVSSGYSHCMALTLDSGILTWGKGSDGQL 463
Score = 51 (23.0 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 127 EDCKSRTPVDLLSGP-VLQV-VGSGYNSVATE---VFSWGSGANYQLGTG 171
++ K + + LSG V+QV G + V T+ +++WGS QL G
Sbjct: 84 KNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Score = 49 (22.3 bits), Expect = 7.2e-12, Sum P(3) = 7.2e-12
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 807 FDTEITEVSKKKEEDAMSEGNVAIEYSKQSGFLVQKKDNADSLKN--NCS 854
F + I V+ KK E+ + + + F + +KD S N NCS
Sbjct: 734 FQSFIDFVNDKKNEEPSPDAIITTNDEFEKSFFLLQKDYISSKSNDLNCS 783
Score = 46 (21.3 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 396 LHVVSIAAGMVHSTALTEDGALFYWASSDPD-LRCQQLYSMCGRNVVSISAGK 447
+ ++ I+ G H AL++ ++ W S++ L + YS +N I++ K
Sbjct: 369 IKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPK 421
Score = 43 (20.2 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 482 KATSVSVGETHLLIVGSLYHPIY 504
K +S G H+L + YH +Y
Sbjct: 370 KIIQISCGSNHILALSDQYH-VY 391
Score = 43 (20.2 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 437 GRNVVSISAGKYWTAAVTATGDVYMWDGKKS 467
G V+S+S+G A+T + W GK S
Sbjct: 430 GVTVISVSSGYSHCMALTLDSGILTW-GKGS 459
Score = 41 (19.5 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 31/133 (23%), Positives = 47/133 (35%)
Query: 830 IEYSKQSGFLVQKKDNADSLKNNCSPQTTSXXXXXXXXGGLSMFLSGALDDTPKEIALPP 889
IE G V K + +++ NN + S GG G K I L P
Sbjct: 126 IEGQLALGQPVNKNEKENNINNNTTNNNNSNSNKEGGGGGGGGVKGG------KNI-LSP 178
Query: 890 PPTPRSEGPAWGGAKVPKGSASLREIQSEQSKIKV-NQPTRNKDQFEDPSFGRSEGKVLL 948
P P + + + S L S +S I + N+ + K Q + + V
Sbjct: 179 IPQPLDQFSSASSTSLLIDS--LTSTYSTRSYITLSNEQQQQKIQQQQQKWINGRKSVNS 236
Query: 949 SSFMTSKPIPVVS 961
S+ +S P VS
Sbjct: 237 STITSSSPFSSVS 249
Score = 40 (19.1 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 5/28 (17%), Positives = 18/28 (64%)
Query: 697 ISKQVRALRKKLQQIEMLEVKLSNGHIL 724
I+ +++ + ++ I+++++ + HIL
Sbjct: 355 INNELQMMTDQMNSIKIIQISCGSNHIL 382
Score = 37 (18.1 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 964 AQQATDGDKSTPPWAASGTPPSLSRPS 990
+ T + STP A+ +P LS S
Sbjct: 292 SSSTTTSNNSTPNTTANNSPNLLSSSS 318
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 200 (75.5 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 79/299 (26%), Positives = 131/299 (43%)
Query: 152 SVATEVFSW-----GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V E+++W G+ + QLG G+ + P V+ L G I+ +S +V VT
Sbjct: 404 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDE 463
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G++Y +G G +G D +G V+ P ++ + V+ ++ +H V+ T
Sbjct: 464 GQLYAFGSDYYGCMG---VDKVAGPE-VLEPMQLNF-FSNNPVEQVSCGDNHVVVLTRNK 518
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCN 325
EV++WG G+LG S + TP++V K L I+AV T ++++SG+V G N
Sbjct: 519 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 578
Query: 326 REGQLGY-----GTSN-SASNYTPRVVESLKGKDLV-----GVAAAKYHTIVLGADGERV 374
+LG G N A + P K L VA K HT + G +
Sbjct: 579 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLL 638
Query: 375 IVARNLKKSGSTPLKFHRK---IKL--------HVVSIAAGMVHSTALTEDGALFYWAS 422
N K G + ++K I L V+ ++ G + A T+D +F W +
Sbjct: 639 TFGCN--KCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN 695
Score = 190 (71.9 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 63/244 (25%), Positives = 106/244 (43%)
Query: 135 VDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLIS 194
V LL+ P + S V + + Y G G + QKL + S G + +
Sbjct: 338 VTLLNAPTKRPRSSTVTETPIAVVTSRTSEVYVWGGGKSTPQKLDV-IKS--GCSARQVC 394
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
A H VT E+YTW +GG H H +A+ P+ V L + ++ ++
Sbjct: 395 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG-HGDKASYRQPKHVEK-LQGKAIRQVSC 452
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA------VAAANK 308
TV T+ G+++ +GS+ G +G VD P + ++L + V+ +
Sbjct: 453 GDDFTVCVTDEGQLYAFGSDYYGCMG---VDKVAGPEVLEPMQLNFFSNNPVEQVSCGDN 509
Query: 309 HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLG 368
H V++ + EV++WGC G+LG + YTP+ V+ K +V V T +L
Sbjct: 510 HVVVLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQKVDVPKALIIVAVQCGCDGTFLLT 567
Query: 369 ADGE 372
G+
Sbjct: 568 QSGK 571
Score = 149 (57.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 67/244 (27%), Positives = 103/244 (42%)
Query: 135 VDLLSGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGN-AHLQKL-PCKVDSLHG 187
V+ L G ++ V G + T+ ++++GS +G A + L P +++
Sbjct: 439 VEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSN 498
Query: 188 FVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG-HPDFDIHSGQAAVITPRRVTSGLGS 246
++ +S H V +T EVY+WG G GRLG + D ++ Q V P+ +
Sbjct: 499 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQK-VDVPKALI----- 552
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG-------------YTSVDTQPTPRRV 293
+ + T L T+ G+V G N +LG Y V +
Sbjct: 553 --IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLA 610
Query: 294 SSLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGK 352
L KI VA HTA + E G + T+GCN+ GQLG G NY R+ +L G
Sbjct: 611 KQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVG------NYKKRLGINLLGG 664
Query: 353 DLVG 356
L G
Sbjct: 665 PLGG 668
Score = 146 (56.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 54/204 (26%), Positives = 87/204 (42%)
Query: 139 SGPVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLIS 194
+ PV QV G + V T EV+SWG G +LG + P KVD +I +
Sbjct: 498 NNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQ 557
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF--DIHSGQAAVITPRRVTSGLGSR----R 248
+ +T G+V G +LG I + +A P + L + +
Sbjct: 558 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYK 617
Query: 249 VKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAAA 306
++T+A K HT E G + T+G N+ GQLG + + + L K +I V+
Sbjct: 618 IRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCG 677
Query: 307 NKHTAVVSESGEVFTWGCNREGQL 330
++ T ++ +F WG G+L
Sbjct: 678 DEFTIAATDDNHIFAWGNGGNGRL 701
Score = 58 (25.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 31/134 (23%), Positives = 54/134 (40%)
Query: 385 STPLKFHRKIKLHVV-SIAAGMVHSTALTEDGALFYWASSDPDLRCQQL----YS----- 434
+T +++ + + ++A G H+ A+ E G L + + +C QL Y
Sbjct: 604 TTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCN----KCGQLGVGNYKKRLGI 659
Query: 435 ------MCGRNVVSISAGKYWTAAVTATGDVYMW-DGKKSKDNPPLVTRLHGIKKATSVS 487
+ G+ V+ +S G +T A T ++ W +G + R HG TS
Sbjct: 660 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWP 719
Query: 488 VGETHLLIVGSLYH 501
I GSL+H
Sbjct: 720 RP-----IFGSLHH 728
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 187 (70.9 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 48/174 (27%), Positives = 80/174 (45%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAA 306
RV+ + H +L G+VF+WG+ R GQLG+ +++ + PR + +L+ L++ VAA
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 307 NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
H+ +SE+G+++ WG N GQL T + N R + +D G+ K V
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNED--GL---KEELAV 276
Query: 367 LGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW 420
A +A P + V + G H+ +T G L+ W
Sbjct: 277 ADAGAPAHFIAIQ-----PFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTW 325
Score = 173 (66.0 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 49/174 (28%), Positives = 82/174 (47%)
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
+L++ + +H ++ +G+VF+WG R GQLG+GT + PR++E+L+G +
Sbjct: 160 ELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEA--ELEPRLLEALQGLRMAK 217
Query: 357 VAAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAA----GMVHSTALT 412
VAA +H++ L G+ I N + P + + K G+ A+
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVA 277
Query: 413 EDGALFYWASSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWD-GK 465
+ GA ++ + P L G + V S G TA VT TG++Y W GK
Sbjct: 278 DAGAPAHFIAIQPFPALLDL--PLGSDAVMASCGSRHTAVVTRTGELYTWGWGK 329
Score = 139 (54.0 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWG 213
A +VFSWG+G + QLG G + P +++L G + ++A +HSV ++ G++Y WG
Sbjct: 179 AGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWG 238
Query: 214 YGRGGRLGHP 223
+ G+L P
Sbjct: 239 WNESGQLALP 248
Score = 135 (52.6 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H + + + G+V++WG GR G+LGH + A + PR + + G R K +AA H
Sbjct: 172 HVLLLCAAGQVFSWGAGRHGQLGHGTLE------AELEPRLLEALQGLRMAK-VAAGGWH 224
Query: 259 TVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKL 298
+V +E G+++ WG N GQL T T+ R + +L
Sbjct: 225 SVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATEL 265
Score = 103 (41.3 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 287 QPTPRRVSSLKLKIIAVAAA--NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPR 344
QP P + L L AV A+ ++HTAVV+ +GE++TWG + GQLG+ S S P
Sbjct: 289 QPFPALLD-LPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDR--PC 345
Query: 345 VVESLKGKDLV--GVAAAKYHTIVLGADGER 373
VE + L V ++T V + ++
Sbjct: 346 CVEYFVERQLEVRAVTCGPWNTYVYAMERDK 376
Score = 85 (35.0 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY---TSVDTQPTPRRVSSLKLKI 300
LGS V ++H T + T GE++TWG + GQLG+ TS+D +L++
Sbjct: 299 LGSDAVMASCGSRH-TAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEV 357
Query: 301 IAVAAANKHTAV 312
AV +T V
Sbjct: 358 RAVTCGPWNTYV 369
Score = 39 (18.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 252 IAAAKHHTVLATEGGEVFTWGS 273
++A +T L T GG V GS
Sbjct: 45 VSAGWSYTALVTRGGRVELSGS 66
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 173 (66.0 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 65/217 (29%), Positives = 99/217 (45%)
Query: 163 GAN-Y-QLGTGNAHLQKLP--CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGG 218
GAN Y QLG G+ +P K S IK I+ HS +T GE++ G+ + G
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 80
Query: 219 RLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQ 278
+LG H+ T SG V+ +A T++ G V + GSN GQ
Sbjct: 81 QLGLN----HTEDVLCFTLCTALSGFC---VQEVACGWDFTIILGRAGLVLSCGSNAFGQ 133
Query: 279 LGYTSVDTQPT--PRRVS-SLKLKIIAVAAANKHTAVVSESGEVFTWG---CNREGQLGY 332
LG + + P P+++ SLK K + +AA +H +ESG VF WG +R ++
Sbjct: 134 LGVPQI-SGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQ 192
Query: 333 GTSNSA--SNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
G + + P ++ L+ + VAA YH + L
Sbjct: 193 GKTLPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCVSL 229
Score = 159 (61.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 50/163 (30%), Positives = 77/163 (47%)
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFTWGCNREG 328
G+N GQLG + P+ + + K I ++A H+AV++ +GE+F G N+ G
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 80
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNL-------K 381
QLG + +T + +L G + VA TI+LG G + N +
Sbjct: 81 QLGLNHTEDVLCFT--LCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ 138
Query: 382 KSGST--PLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWAS 422
SG P K + +K V IAAG+ H+ A TE G +F W +
Sbjct: 139 ISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGLVFQWGT 181
Score = 124 (48.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 36/124 (29%), Positives = 56/124 (45%)
Query: 249 VKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAAN 307
+K+IA H+ + T GE+F G N+ GQLG + ++L + VA
Sbjct: 52 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGW 111
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
T ++ +G V + G N GQLG + ++ +SLK K VG+AA H +
Sbjct: 112 DFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKEK-AVGIAAGLRHALAA 170
Query: 368 GADG 371
G
Sbjct: 171 TESG 174
Score = 117 (46.2 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 147 GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKV--DSLHGFVIKLISAAKFHSV 201
G G+++V T E+F G QLG H + + C +L GF ++ ++ ++
Sbjct: 58 GGGHSAVITGAGELFVCGHNKAGQLGLN--HTEDVLCFTLCTALSGFCVQEVACGWDFTI 115
Query: 202 AVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
+ G V + G G+LG P SG + P+++ L + V IAA H +
Sbjct: 116 ILGRAGLVLSCGSNAFGQLGVPQI---SGPCLI--PQKIKQSLKEKAVG-IAAGLRHALA 169
Query: 262 ATEGGEVFTWGS 273
ATE G VF WG+
Sbjct: 170 ATESGLVFQWGT 181
Score = 40 (19.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 12/49 (24%), Positives = 28/49 (57%)
Query: 960 VSARAQQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQQ---GKQHCLS 1005
+++RA++ G K+ P + A+ P + L ++++++ G HC+S
Sbjct: 183 MASRAKRVHQG-KTLPVFWAAKEPCEIK--GLEDVKVKRVAAGSYHCVS 228
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 175 (66.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 61/227 (26%), Positives = 100/227 (44%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
E++ WG + +LG G+ ++ P +V L V+ I+ + HS T G++Y WG
Sbjct: 434 ELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQS 493
Query: 216 -RGGRL-GHPD-FDIHSG-QAAVITPRRV-TSGL--GSRRVKTIAAAKHHTVLATEGGEV 268
G++ P IHS + +P G G ++K +A + + T+ GEV
Sbjct: 494 DETGKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEV 553
Query: 269 FTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREG 328
F W + P P R + + + N H +++SGEV T G N+ G
Sbjct: 554 FMW-----------EIPGIPIPLRNALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTG 602
Query: 329 QLGYGTSNSASNYTPRVVESLK------GKD--LVGVAAAKYHTIVL 367
QLG A N P +V+ L D +V +AA ++H++ L
Sbjct: 603 QLG---RTDAEN-EPGIVKQLSFDPDGLNSDEFVVSIAAGEFHSVAL 645
Score = 163 (62.4 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 249 VKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIA-VAAAN 307
VK IA +T TE GE++ WG N G+LG + TP RV LK ++++ +A ++
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSS 475
Query: 308 KHTAVVSESGEVFTWGCNRE-GQL-GYGTSNSASNYTPRVVESLKGKDLVGV--AAAKYH 363
H+A +ESG+++ WG + E G++ + +Y R ++S G + G K
Sbjct: 476 THSACYTESGKMYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKIK 535
Query: 364 TIVLGADGERVIVARN---LKKSGSTPLKFHRKIKLHVV-SIAAGMVHSTALTEDG 415
+ G V+ + + P+ ++ H V +I G H LT+ G
Sbjct: 536 QLACGQRCIAVLTQMGEVFMWEIPGIPIPLRNALENHSVRNIVMGNFHLVCLTDSG 591
Score = 134 (52.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 72/256 (28%), Positives = 103/256 (40%)
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRV 249
+K I+ ++ A+T GE+Y WG G LG D I TP RV L + V
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGD-TIDRR-----TPTRVIR-LKNEVV 468
Query: 250 KTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTP------RRVSSLKL----- 298
TIA + H+ TE G+++ WG + E G P P R + S
Sbjct: 469 STIACSSTHSACYTESGKMYVWGQSDE--TGKIQAIPSPLPIHSYLDREIKSPNGGGVGG 526
Query: 299 ------KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGK 352
KI +A + AV+++ GEVF W G + N+ N++ R
Sbjct: 527 FFGGGGKIKQLACGQRCIAVLTQMGEVFMWEI--PG-IPIPLRNALENHSVR-------- 575
Query: 353 DLVGVAAAKYHTIVLGADGERVIVARNLK-KSGSTPLKFHRKI--KLH-----------V 398
+ +H + L GE V + RN + G T + I +L V
Sbjct: 576 ---NIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAENEPGIVKQLSFDPDGLNSDEFV 632
Query: 399 VSIAAGMVHSTALTED 414
VSIAAG HS AL E+
Sbjct: 633 VSIAAGEFHSVALVEN 648
Score = 126 (49.4 bits), Expect = 8.7e-12, Sum P(4) = 8.7e-12
Identities = 30/64 (46%), Positives = 37/64 (57%)
Query: 224 DFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTS 283
D +IH + T S L + +K +A +H VL TEGG V+TWGSN GQLGY
Sbjct: 312 DPNIHFTPIRISTHFLENSPLNT--IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYL- 368
Query: 284 VDTQ 287
VDTQ
Sbjct: 369 VDTQ 372
Score = 116 (45.9 bits), Expect = 8.7e-12, Sum P(4) = 8.7e-12
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 282 TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNY 341
+S+ T TP+ V +K IA K+TA ++E GE++ WG N G+LG G ++
Sbjct: 400 SSLQTTCTPKMVEIKCVKYIATGV--KNTAALTEWGELYMWGINEHGELGLG--DTIDRR 455
Query: 342 TPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGS-----TPLKFHRKIKL 396
TP V LK + + +A + H+ G+ + ++ ++G +PL H +
Sbjct: 456 TPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQS-DETGKIQAIPSPLPIHSYLDR 514
Query: 397 HVVSIAAGMV 406
+ S G V
Sbjct: 515 EIKSPNGGGV 524
Score = 93 (37.8 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 289 TPRRVSSLKLK------IIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
TP R+S+ L+ I VA N H +++E G V+TWG N GQLGY
Sbjct: 318 TPIRISTHFLENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGY 367
Score = 74 (31.1 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGH 222
IK ++ +H V +T G V+TWG G+LG+
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGY 367
Score = 72 (30.4 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 386 TPLKFHRKIKLHVVS-IAAGMVHSTALTEDGALFYWASSDPDLRCQQLYS 434
TP + R +K VVS IA HS TE G ++ W SD + Q + S
Sbjct: 456 TPTRVIR-LKNEVVSTIACSSTHSACYTESGKMYVWGQSDETGKIQAIPS 504
Score = 60 (26.2 bits), Expect = 7.9e-05, Sum P(5) = 7.9e-05
Identities = 21/72 (29%), Positives = 32/72 (44%)
Query: 401 IAAGMVHSTALTEDGALFYWASSDP---------DLRCQQLYSMCGRNVVS-ISAGKYWT 450
IA G+ ++ ALTE G L+ W ++ D R VVS I+ +
Sbjct: 419 IATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHS 478
Query: 451 AAVTATGDVYMW 462
A T +G +Y+W
Sbjct: 479 ACYTESGKMYVW 490
Score = 56 (24.8 bits), Expect = 8.7e-12, Sum P(4) = 8.7e-12
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPC--KVDSLHGFV--IKLISAAKFHSVAVTSLGEVYTW 212
VF++G G+N LG G P KV+ +K ++ +H+V VT +Y
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYIC 62
Query: 213 GYGRGGRLG 221
G + + G
Sbjct: 63 GIKKDPKHG 71
Score = 55 (24.4 bits), Expect = 8.7e-12, Sum P(4) = 8.7e-12
Identities = 37/157 (23%), Positives = 66/157 (42%)
Query: 437 GRNVVSISAGKYWTAAVTATGDVYMWDGKKSKDNP-PLVTRLHGIKKATSVSVGETHLLI 495
G + ++ G+ A +T G+V+MW+ P PL L ++ +G HL+
Sbjct: 531 GGKIKQLACGQRCIAVLTQMGEVFMWE---IPGIPIPLRNALEN-HSVRNIVMGNFHLVC 586
Query: 496 VGSLYHPIYPPNVAKNPQKLKLNGRNDLEEFYEDFMFNDESNNMPSAIDKDDSGVRLAPS 555
+ + + +N K GR D E E + S + P ++ D+ V +A
Sbjct: 587 LTDSGEVV---TIGRN--KTGQLGRTDAEN--EPGIVKQLSFD-PDGLNSDEFVVSIAAG 638
Query: 556 ---LKSLCEN-----VAAQCLVEPRNALQLLEISDSL 584
+L EN +A Q + RN L+ L I +++
Sbjct: 639 EFHSVALVENTPKTKLALQLVRMQRNYLRQLNILNNI 675
Score = 51 (23.0 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 40/180 (22%), Positives = 70/180 (38%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTATG 457
+ +A G LT+ G +F W P + ++ +V +I G + +T +G
Sbjct: 534 IKQLACGQRCIAVLTQMGEVFMWEI--PGIPIPLRNALENHSVRNIVMGNFHLVCLTDSG 591
Query: 458 DVYMWD-------GKKSKDNPP-LVTRLH----GIKK---ATSVSVGETH-LLIVGSLYH 501
+V G+ +N P +V +L G+ S++ GE H + +V +
Sbjct: 592 EVVTIGRNKTGQLGRTDAENEPGIVKQLSFDPDGLNSDEFVVSIAAGEFHSVALVENTPK 651
Query: 502 PIYPPNVAKNPQKLKLNGRNDLEEFYEDFMFNDESNNMPSAIDKDDSGVR--LAPSLKSL 559
+ + Q+ L N L Y M + S P + ++G L PSLK L
Sbjct: 652 TKLALQLVRM-QRNYLRQLNILNNIYYKSMMSMASPYDPVVLSMMNNGSASTLPPSLKGL 710
Score = 49 (22.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 142 VLQVVGSGYNSVA-TE---VFSWGSGANYQLG 169
+ QV Y+ V TE V++WGS +N QLG
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 43 (20.2 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 977 WAASGTP-P---SLSRPSLRNIQMQQGKQHCLSHSPKTRTAG 1014
W G P P +L S+RNI M CL+ S + T G
Sbjct: 556 WEIPGIPIPLRNALENHSVRNIVMGNFHLVCLTDSGEVVTIG 597
Score = 38 (18.4 bits), Expect = 7.9e-05, Sum P(5) = 7.9e-05
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 872 MFLSGALDDTPKEIALPPP 890
M++ G D+T K A+P P
Sbjct: 487 MYVWGQSDETGKIQAIPSP 505
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 192 (72.6 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 80/284 (28%), Positives = 121/284 (42%)
Query: 163 GAN-Y-QLGTGNAHLQKLP--CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGG 218
GAN Y QLG G+ +P K S IK I+ HS +T GE++ G+ + G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 219 RLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQ 278
+LG H+ T SG V+ +A T++ G V + GSN GQ
Sbjct: 61 QLGLN----HTEDVLCFTLCTALSGFC---VQEVACGWDFTIILGRAGLVLSCGSNAFGQ 113
Query: 279 LGYTSVDTQPT--PRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWG---CNREGQLGYG 333
LG + + P P+++ SLK K + +AA +H +ESG VF WG +R ++ G
Sbjct: 114 LGVPQI-SGPCLIPQKIKSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQG 172
Query: 334 TSNSA--SNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSGST----- 386
+ + P ++ G L V+ + Y T L GE + K G
Sbjct: 173 KTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTS-LSTAGEGHLYVWGSNKHGQLVSKEV 231
Query: 387 ----PLKFHRKIKLH--VVSIAAGMVHSTALTEDGALFYWASSD 424
P K + H + ++ +G H A TE G +F W +D
Sbjct: 232 FLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRAD 275
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 76/291 (26%), Positives = 126/291 (43%)
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATE---VFSWGSG- 163
FG L V + SG + + KS L V G + ATE VF WG+G
Sbjct: 111 FGQLGVPQI---SGPCLIPQKIKS-----LKEKAVGIAAGLRHALAATESGLVFQWGTGM 162
Query: 164 ANY--QLGTGNA----HLQKLPCKVDSLHGFVIKLIS-AAKFHSVAVTSLGEVYTWGYGR 216
A+ ++ G K PC++ G ++ +S +A S++ G +Y WG +
Sbjct: 163 ASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNK 222
Query: 217 GGRLGHPDFDIHSGQAAVITPRRV-TSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
G+L S + ++ P+++ T ++ + + H V TE G+VFTWG
Sbjct: 223 HGQLV-------SKEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRAD 275
Query: 276 EGQLG-----YTS-----VDT------QPTPRRVSSLKLKIIAVAAANKHTAVVSESGEV 319
GQLG Y + +D+ QP + + + + +A ++H V G+
Sbjct: 276 YGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHNLAVV--GDC 333
Query: 320 -FTWGCNREGQLGYGTSNSASNYTPRVVESLK-GKD-LVGVAAAKYHTIVL 367
+WG N G G GT A+ + P+ V++L K L+G A H++ L
Sbjct: 334 CLSWGWNEHGMCGDGTE--ANVHVPKPVKALGYAKQILIGCGAG--HSLAL 380
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 69/243 (28%), Positives = 108/243 (44%)
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFTWGCNREG 328
G+N GQLG + P+ + + K I ++A H+AV++ +GE+F G N+ G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSG--- 384
QLG + +T + +L G + VA TI+LG G + N + G
Sbjct: 61 QLGLNHTEDVLCFT--LCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ 118
Query: 385 -STPLKFHRKIKL---HVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNV 440
S P +KIK V IAAG+ H+ A TE G +F W + R ++++ G+ +
Sbjct: 119 ISGPCLIPQKIKSLKEKAVGIAAGLRHALAATESGLVFQWGTGMAS-RAKRVHQ--GKTL 175
Query: 441 VSISAGKYWTAAVTATGDVYMWDGKKSKDNPP-LVTRLHGIKKATSVSV-GETHLLIVGS 498
+W A + K NP L+ ++ TS+S GE HL + GS
Sbjct: 176 PV-----FWAAKEPC----------EIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGS 220
Query: 499 LYH 501
H
Sbjct: 221 NKH 223
Score = 130 (50.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 52/198 (26%), Positives = 87/198 (43%)
Query: 147 GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKV--DSLHGFVIKLISAAKFHSV 201
G G+++V T E+F G QLG H + + C +L GF ++ ++ ++
Sbjct: 38 GGGHSAVITGAGELFVCGHNKAGQLGLN--HTEDVLCFTLCTALSGFCVQEVACGWDFTI 95
Query: 202 AVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
+ G V + G G+LG P SG + P+++ S L + V IAA H +
Sbjct: 96 ILGRAGLVLSCGSNAFGQLGVPQI---SGPCLI--PQKIKS-LKEKAVG-IAAGLRHALA 148
Query: 262 ATEGGEVFTWGSNREGQLGYTSVD-TQPT------PRRVSSLKLKIIAVAAANKHTAVVS 314
ATE G VF WG+ + T P P + ++ + + + +S
Sbjct: 149 ATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLS 208
Query: 315 ESGE--VFTWGCNREGQL 330
+GE ++ WG N+ GQL
Sbjct: 209 TAGEGHLYVWGSNKHGQL 226
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 199 (75.1 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 79/299 (26%), Positives = 132/299 (44%)
Query: 152 SVATEVFSW-----GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V E+++W G+ + QLG G+ + P V+ L G I+ +S +V VT
Sbjct: 385 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDE 444
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G++Y +G G +G D +G V+ P ++ L + V+ ++ +H V+ T
Sbjct: 445 GQLYAFGSDYYGCMG---VDKVAGPE-VLEPMQLNFFLNNP-VEQVSCGDNHVVVLTRNK 499
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCN 325
EV++WG G+LG S + TP++V K L I+AV T ++++SG+V G N
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 326 REGQLGY-----GTSN-SASNYTPRVVESLKGKDLV-----GVAAAKYHTIVLGADGERV 374
+LG G N A + P K L +A K HT + G +
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 619
Query: 375 IVARNLKKSGSTPLKFHRK---IKL--------HVVSIAAGMVHSTALTEDGALFYWAS 422
N K G + ++K I L V+ ++ G + A T+D +F W +
Sbjct: 620 TFGCN--KCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN 676
Score = 188 (71.2 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 62/241 (25%), Positives = 105/241 (43%)
Query: 135 VDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLIS 194
V LL+ P + S V + + Y G G + QKL + S G + +
Sbjct: 319 VTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDV-IKS--GCSARQVC 375
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
A H VT E+YTW +GG H H +A+ P+ V L + ++ ++
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG-HGDKASYRQPKHVEK-LQGKAIRQVSC 433
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTA 311
TV T+ G+++ +GS+ G +G V P +++ L + V+ + H
Sbjct: 434 GDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVV 493
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
V++ + EV++WGC G+LG + YTP+ V+ K +V V T +L G
Sbjct: 494 VLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQKVDVPKALIIVAVQCGCDGTFLLTQSG 551
Query: 372 E 372
+
Sbjct: 552 K 552
Score = 151 (58.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 66/268 (24%), Positives = 118/268 (44%)
Query: 138 LSGPVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
L+ PV QV G + V T EV+SWG G +LG + P KVD +I +
Sbjct: 478 LNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAV 537
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF--DIHSGQAAVITPRRVTSGLGSR---- 247
+ +T G+V G +LG I + +A P + L +
Sbjct: 538 QCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFY 597
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAA 305
+++TIA K HT E G + T+G N+ GQLG + + + L K +I V+
Sbjct: 598 KIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSC 657
Query: 306 ANKHTAVVSESGEVFTWGCNREGQLG-------YGTSNSASNYTPRVVESLKGKDLVGVA 358
++ T ++ +F WG G+L +G S+ +++ + SL + ++
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHG-SDICTSWPRPIFGSLH--HVPDLS 714
Query: 359 AAKYHTIVLGADGERVIVARNLKKSGST 386
+HTI++ E+V+ ++ ++ + S+
Sbjct: 715 CRGWHTILIV---EKVLNSKTIRSNSSS 739
Score = 145 (56.1 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 65/244 (26%), Positives = 103/244 (42%)
Query: 135 VDLLSGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGN-AHLQKL-PCKVDSLHG 187
V+ L G ++ V G + T+ ++++GS +G A + L P +++
Sbjct: 420 VEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLN 479
Query: 188 FVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG-HPDFDIHSGQAAVITPRRVTSGLGS 246
++ +S H V +T EVY+WG G GRLG + D ++ Q V P+ +
Sbjct: 480 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQK-VDVPKALI----- 533
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG-------------YTSVDTQPTPRRV 293
+ + T L T+ G+V G N +LG Y + +
Sbjct: 534 --IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLA 591
Query: 294 SSLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGK 352
L KI +A HTA + E G + T+GCN+ GQLG G NY R+ +L G
Sbjct: 592 KQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG------NYKKRLGINLLGG 645
Query: 353 DLVG 356
L G
Sbjct: 646 PLGG 649
Score = 59 (25.8 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 32/134 (23%), Positives = 54/134 (40%)
Query: 385 STPLKFHRKIKLHVV-SIAAGMVHSTALTEDGALFYWASSDPDLRCQQL----YS----- 434
+T +++ + + +IA G H+ A+ E G L + + +C QL Y
Sbjct: 585 TTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCN----KCGQLGVGNYKKRLGI 640
Query: 435 ------MCGRNVVSISAGKYWTAAVTATGDVYMW-DGKKSKDNPPLVTRLHGIKKATSVS 487
+ G+ V+ +S G +T A T ++ W +G + R HG TS
Sbjct: 641 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWP 700
Query: 488 VGETHLLIVGSLYH 501
I GSL+H
Sbjct: 701 RP-----IFGSLHH 709
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 209 (78.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 82/299 (27%), Positives = 133/299 (44%)
Query: 152 SVATEVFSW-----GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V E+++W G+ + QLG G+ + P V+ L G I+ +S +V VT
Sbjct: 402 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDE 461
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G++Y +G G +G D +G A V+ P ++ L S V+ ++ +H V+ T
Sbjct: 462 GQLYAFGSDYYGCMG---VDKVAG-AEVLEPMQLDFFL-SNPVEQVSCGDNHVVVLTRNK 516
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCN 325
EV++WG G+LG S + TP++V K L I+AV T ++++SG+V G N
Sbjct: 517 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 576
Query: 326 REGQLGY-----GTSN-SASNYTPRVVESLKGKDLV-----GVAAAKYHTIVLGADGERV 374
+LG G N A + P K L +A K HT L G +
Sbjct: 577 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLL 636
Query: 375 IVARNLKKSGSTPLKFHRK---IKL--------HVVSIAAGMVHSTALTEDGALFYWAS 422
N K G + ++K I L V+ ++ G + A T+D +F W +
Sbjct: 637 TFGCN--KCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN 693
Score = 187 (70.9 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 62/241 (25%), Positives = 104/241 (43%)
Query: 135 VDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLIS 194
V LL+ P + S V + + Y G G + QKL + S G + +
Sbjct: 336 VTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDV-IKS--GCSARQVC 392
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
A H VT E+YTW +GG H H +A+ P+ V L + ++ ++
Sbjct: 393 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG-HGDKASYRQPKHVEK-LQGKAIRQVSC 450
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTA 311
TV T+ G+++ +GS+ G +G V P ++ L + V+ + H
Sbjct: 451 GDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVV 510
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
V++ + EV++WGC G+LG + YTP+ V+ K +V V T +L G
Sbjct: 511 VLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQKVDVPKALIIVAVQCGCDGTFLLTQSG 568
Query: 372 E 372
+
Sbjct: 569 K 569
Score = 154 (59.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 138 LSGPVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
LS PV QV G + V T EV+SWG G +LG + P KVD +I +
Sbjct: 495 LSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAV 554
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF--DIHSGQAAVITPRRVTSGLGSR---- 247
+ +T G+V G +LG I + +A P + L +
Sbjct: 555 QCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFY 614
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAA 305
+++TIA K HT E G + T+G N+ GQLG + + + L K +I V+
Sbjct: 615 KIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSC 674
Query: 306 ANKHTAVVSESGEVFTWGCNREGQL 330
++ T ++ +F WG G+L
Sbjct: 675 GDEFTIAATDDNHIFAWGNGGNGRL 699
Score = 151 (58.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 67/244 (27%), Positives = 103/244 (42%)
Query: 135 VDLLSGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGN-AHLQKL-PCKVDSLHG 187
V+ L G ++ V G + T+ ++++GS +G A + L P ++D
Sbjct: 437 VEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLS 496
Query: 188 FVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG-HPDFDIHSGQAAVITPRRVTSGLGS 246
++ +S H V +T EVY+WG G GRLG + D ++ Q V P+ +
Sbjct: 497 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQK-VDVPKALI----- 550
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG-------------YTSVDTQPTPRRV 293
+ + T L T+ G+V G N +LG Y V +
Sbjct: 551 --IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLA 608
Query: 294 SSLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGK 352
L KI +A HTA + E G + T+GCN+ GQLG G NY R+ +L G
Sbjct: 609 KQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVG------NYKKRLGINLLGG 662
Query: 353 DLVG 356
L G
Sbjct: 663 PLGG 666
Score = 61 (26.5 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 33/134 (24%), Positives = 54/134 (40%)
Query: 385 STPLKFHRKIKLHVV-SIAAGMVHSTALTEDGALFYWASSDPDLRCQQL----YS----- 434
+T +++ + + +IA G H+ AL E G L + + +C QL Y
Sbjct: 602 TTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCN----KCGQLGVGNYKKRLGI 657
Query: 435 ------MCGRNVVSISAGKYWTAAVTATGDVYMW-DGKKSKDNPPLVTRLHGIKKATSVS 487
+ G+ V+ +S G +T A T ++ W +G + R HG TS
Sbjct: 658 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWP 717
Query: 488 VGETHLLIVGSLYH 501
I GSL+H
Sbjct: 718 RP-----IFGSLHH 726
Score = 40 (19.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 869 GLSMFLSGALDDTPKEIALPPPPTPRSEGPAWGGAKVPKGSASLREIQSEQ 919
GL M L+ P A PP P G P + S +++ E+
Sbjct: 866 GLKMASEAPLEHKPPAGAWPPRLNPAGTCAGKGTPLAPTCACSSLQVEVER 916
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 206 (77.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 82/299 (27%), Positives = 131/299 (43%)
Query: 152 SVATEVFSW-----GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V E+++W G+ + QLG G+ + P V+ L G I +S +V VT
Sbjct: 383 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDE 442
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G++Y +G G +G D SG V+ P ++ L S V+ ++ +H V+ T
Sbjct: 443 GQLYAFGSDYYGCMG---VDKVSGPE-VLEPMQLNFFL-SNPVEQVSCGDNHVVVLTRNK 497
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCN 325
EV++WG G+LG S + TP+RV K L I+AV T ++++SG+V G N
Sbjct: 498 EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 557
Query: 326 REGQLGY-----GTSN-SASNYTPRVVESLKGKDLV-----GVAAAKYHTIVLGADGERV 374
+LG G N A + P K L +A K HT + G +
Sbjct: 558 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 617
Query: 375 IVARNLKKSGSTPLKFHRK---IKL--------HVVSIAAGMVHSTALTEDGALFYWAS 422
N K G + ++K I L V+ ++ G + A T+D +F W +
Sbjct: 618 TFGCN--KCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN 674
Score = 186 (70.5 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 62/241 (25%), Positives = 104/241 (43%)
Query: 135 VDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLIS 194
V LL+ P + S V + + Y G G + QKL + S G + +
Sbjct: 317 VTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDV-IKS--GCSARQVC 373
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
A H VT E+YTW +GG H H +A+ P+ V L + + ++
Sbjct: 374 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG-HGDKASYRQPKHVEK-LQGKAIHQVSC 431
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTA 311
TV T+ G+++ +GS+ G +G V P +++ L + V+ + H
Sbjct: 432 GDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVV 491
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
V++ + EV++WGC G+LG + YTP+ V+ K +V V T +L G
Sbjct: 492 VLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQRVDVPKALIIVAVQCGCDGTFLLTQSG 549
Query: 372 E 372
+
Sbjct: 550 K 550
Score = 151 (58.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 56/205 (27%), Positives = 88/205 (42%)
Query: 138 LSGPVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
LS PV QV G + V T EV+SWG G +LG + P +VD +I +
Sbjct: 476 LSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAV 535
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF--DIHSGQAAVITPRRVTSGLGSR---- 247
+ +T G+V G +LG I + +A P + L +
Sbjct: 536 QCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFY 595
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAA 305
+++TIA K HT E G + T+G N+ GQLG + + + L K +I V+
Sbjct: 596 KIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSC 655
Query: 306 ANKHTAVVSESGEVFTWGCNREGQL 330
++ T ++ +F WG G+L
Sbjct: 656 GDEFTIAATDDNHIFAWGNGGNGRL 680
Score = 147 (56.8 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 65/243 (26%), Positives = 100/243 (41%)
Query: 135 VDLLSGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKL--PCKVDSLHG 187
V+ L G + V G + T+ ++++GS +G ++ P +++
Sbjct: 418 VEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLS 477
Query: 188 FVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
++ +S H V +T EVY+WG G GRLG D + TP+RV +
Sbjct: 478 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG---LD---SEEDYYTPQRVDVPK-AL 530
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG-------------YTSVDTQPTPRRVS 294
+ + T L T+ G+V G N +LG Y V +
Sbjct: 531 IIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK 590
Query: 295 SLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKD 353
L KI +A HTA + E G + T+GCN+ GQLG G NY R+ +L G
Sbjct: 591 QLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG------NYKKRLGINLLGGP 644
Query: 354 LVG 356
L G
Sbjct: 645 LGG 647
Score = 59 (25.8 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 32/134 (23%), Positives = 54/134 (40%)
Query: 385 STPLKFHRKIKLHVV-SIAAGMVHSTALTEDGALFYWASSDPDLRCQQL----YS----- 434
+T +++ + + +IA G H+ A+ E G L + + +C QL Y
Sbjct: 583 TTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCN----KCGQLGVGNYKKRLGI 638
Query: 435 ------MCGRNVVSISAGKYWTAAVTATGDVYMW-DGKKSKDNPPLVTRLHGIKKATSVS 487
+ G+ V+ +S G +T A T ++ W +G + R HG TS
Sbjct: 639 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWP 698
Query: 488 VGETHLLIVGSLYH 501
I GSL+H
Sbjct: 699 RP-----IFGSLHH 707
Score = 42 (19.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 839 LVQKKDNADSLKNNCSPQTTSXXXXXXXXGGLSMFLSGALDDTPKEIALPPP 890
+V+K N+ ++++N S + GG G +D+ +E P P
Sbjct: 721 IVEKVLNSKTIRSNSSGLSIGTVVQSSSPGGRIGGGGGEEEDSQQESETPDP 772
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 196 (74.1 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 70/272 (25%), Positives = 132/272 (48%)
Query: 147 GSGYNSVATE---VFSWGSGANYQLGTGNAHL--QKLPCKVDSLHGFVIKLISAAKFHSV 201
G+ ++V T+ +F++G G + +LG G L Q P V SL G I +S+ HS+
Sbjct: 346 GTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSL 405
Query: 202 AVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRV----TSGLGSRR---VKTIAA 254
+T+ G V+++G G+LG F S Q + P+++ TS ++ + ++A
Sbjct: 406 VLTNKGLVFSFGRNDQGQLGIGCF---SNQQTI--PKQIQWFQTSQQQQQQPINIIKVSA 460
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQ-----PTPRRVSSL---KLKIIAVAAA 306
+H++ ++ + + WG + G LG TS+D Q P +S+ +K I V++
Sbjct: 461 GGYHSIAISDNNDTYAWGRSDYGVLG-TSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSG 519
Query: 307 NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPR--VVESLKGKDLVGVAAAKYHT 364
+H +S G +++WGCN +LG+ + + TP+ + S K L+ + T
Sbjct: 520 FQHNVAMSIDGSLYSWGCNAGQRLGF--KSDENQLTPKKCFINSKDSKPLL-FTCGEIIT 576
Query: 365 IVLGADGERVIVARNLKKSGSTPLKFHRKIKL 396
I++ + I+ L+ ST + ++ L
Sbjct: 577 IIVEKRFKEPIIKTELQLPSSTQSQQQTELSL 608
Score = 166 (63.5 bits), Expect = 4.2e-09, Sum P(4) = 4.2e-09
Identities = 66/306 (21%), Positives = 137/306 (44%)
Query: 142 VLQVVGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFV-IKLISAAK 197
VL G+ ++S T+ ++++G G +LG GN P V+ ++++S A
Sbjct: 191 VLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIAN 250
Query: 198 F--HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAA 255
HS+A+T G+VY+WG +LG + S + P+ + +
Sbjct: 251 GGKHSLALTICGKVYSWGGNDSCQLGLGN---GSSSSYYSLPQLINFNISYNNNNN---- 303
Query: 256 KHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSE 315
++ +T +N +G S+ + ++ K+KI+ ++ +AV+++
Sbjct: 304 -NNNNNSTNNNN----NNNNDGAQQQFSLSQNSSS---NNNKIKIVKLSCGTNRSAVITD 355
Query: 316 SGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVI 375
G +FT+G G+LG G + TP++V+SL+G ++ +++ H++VL G
Sbjct: 356 KGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFS 415
Query: 376 VARN---------LKKSGSTPLKFH--------RKIKLHVVSIAAGMVHSTALTEDGALF 418
RN + P + ++ ++++ ++AG HS A++++ +
Sbjct: 416 FGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTY 475
Query: 419 YWASSD 424
W SD
Sbjct: 476 AWGRSD 481
Score = 166 (63.5 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 77/325 (23%), Positives = 134/325 (41%)
Query: 160 WGSGA-NYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGG 218
WG+G NY+ N ++ + + + I LIS HS +T G +YT+G G G
Sbjct: 164 WGNGIRNYK----NCNMSSIGFS-EMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLG 218
Query: 219 RLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQ 278
+LGH + + +S V S RV +IA H++ T G+V++WG N Q
Sbjct: 219 KLGHGNLESYSSPKLV----EFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQ 274
Query: 279 LGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSA 338
LG + + + I + N + S + + Q ++S+
Sbjct: 275 LGLGNGSSSSYYSLPQLINFNI-SYNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSS 333
Query: 339 SNYTPRVVESLKGKDLVGVAAAKYHTIVLG-ADGERVIVARNLKKSGSTPLKFHRKIKLH 397
+N ++V+ G + V K G D R+ + STP K + ++ H
Sbjct: 334 NNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTP-KLVQSLQGH 392
Query: 398 -VVSIAAGMVHSTALTEDGALFYWASSDPD---LRC---QQL-------YSMCGR----- 438
++ +++G HS LT G +F + +D + C QQ + +
Sbjct: 393 FIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQP 452
Query: 439 -NVVSISAGKYWTAAVTATGDVYMW 462
N++ +SAG Y + A++ D Y W
Sbjct: 453 INIIKVSAGGYHSIAISDNNDTYAW 477
Score = 64 (27.6 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 808 DTEITEVSKKKEEDA-MSEGNV-AIEYSKQSGFLVQKKDNA-DSLKNNCSPQTT 858
+TE+ E ++EED+ + G + AIE +QS +LV++ + + NN TT
Sbjct: 838 ETELEEEQDEEEEDSEIKNGTLTAIEIQQQSFYLVERLNQGLGNFCNNIMDSTT 891
Score = 54 (24.1 bits), Expect = 4.2e-09, Sum P(4) = 4.2e-09
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 399 VSIAAGMVHSTALTEDGALFYW 420
+ +++G H+ A++ DG+L+ W
Sbjct: 514 IDVSSGFQHNVAMSIDGSLYSW 535
Score = 48 (22.0 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 17/91 (18%), Positives = 44/91 (48%)
Query: 667 DNHTKKSTLKNEGDNRLDSFFEPKADANQEISKQVRALRKKLQQIEMLEVKLSNGHILDE 726
+N+ + N DN ++S + N + + L+ +L +++ E KL + ++
Sbjct: 1056 NNNNNNNNNNNNIDNNINSNSINDSSNNNNNNNNIEKLKNELIKLKKDEQKL----LSNQ 1111
Query: 727 QQIAKLQTKSVLERSLAELGVPIELPQAIAA 757
Q+I +L + +L++ + E + + I++
Sbjct: 1112 QEINELIIE-ILDKYVPEFKIKLRANDKISS 1141
Score = 45 (20.9 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 944 GKVLLSSFMTSKPIP 958
GK+ L S + KPIP
Sbjct: 1645 GKIFLKSIIDGKPIP 1659
Score = 37 (18.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 518 NGRNDLEEFYEDFMFNDESNN 538
N N+++ ND SNN
Sbjct: 1063 NNNNNIDNNINSNSINDSSNN 1083
Score = 37 (18.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 22/115 (19%), Positives = 41/115 (35%)
Query: 616 SLDILADLEKSLDLRSSESWSYRRLPTPTATFPXXXXXXXXXXXXXXLRTRDNHTKKSTL 675
S+D ++++ DL L T T T T N K L
Sbjct: 765 SIDYWLEIKQQKDLTFLNLSKLLNLSTITTTTTSNTTTTTTATTTTTTTTTTNLINKKVL 824
Query: 676 -----KNEGDNRLDSFFEPKADANQEISK----QVRALRKKLQQIEMLEVKLSNG 721
K + + ++ E + D +E S+ + A+ + Q ++E +L+ G
Sbjct: 825 VHQDEKQQQREKSETELEEEQDEEEEDSEIKNGTLTAIEIQQQSFYLVE-RLNQG 878
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 192 (72.6 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 58/189 (30%), Positives = 94/189 (49%)
Query: 150 YNSVATE---VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTS 205
+ S +TE V + G G QLG G N +K P V S+ V++ A H+V ++
Sbjct: 44 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV-SIPEDVVQA-EAGGMHTVCLSK 101
Query: 206 LGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEG 265
G+VY++G G LG D + + + P +V +V ++A HT T+
Sbjct: 102 SGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVEL---QEKVVQVSAGDSHTAALTDD 154
Query: 266 GEVFTWGSNRE--GQLGYTS-VDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTW 322
G VF WGS R+ G +G + P +V L + ++ VA+ N H +++ G+++T
Sbjct: 155 GRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTL 213
Query: 323 GCNREGQLG 331
GC +GQLG
Sbjct: 214 GCGEQGQLG 222
Score = 190 (71.9 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 64/190 (33%), Positives = 92/190 (48%)
Query: 241 TSGLGSRRVKTIAAAK-HHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKL 298
T SRRV + + H +TE G V T G GQLG +V + P VS +
Sbjct: 26 TRAAASRRVPGARSCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPE 84
Query: 299 KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVA 358
++ A HT +S+SG+V+++GCN EG LG TS S P VE L+ K +V V+
Sbjct: 85 DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEK-VVQVS 142
Query: 359 AAKYHTIVLGADGERVIVARNLKKSGST-----PLK-----FHRKIKLHVVSIAAGMVHS 408
A HT L DG RV + + + + P+K ++ + VV +A+G H
Sbjct: 143 AGDSHTAALTDDG-RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHL 201
Query: 409 TALTEDGALF 418
LT DG L+
Sbjct: 202 VMLTADGDLY 211
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 59/244 (24%), Positives = 102/244 (41%)
Query: 135 VDLLSGPVLQVVGSGYNSVATE---VFSWGSGANYQLGTGNAHLQK---LPCKVDSLHGF 188
V+L V G + + T+ VF WGS + G K +P +V L
Sbjct: 132 VELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDVP 190
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGH-PD-FDIHSGQAAV---ITPRRVT-S 242
V+K +++ H V +T+ G++YT G G G+LG P+ F G+ + + P+ V
Sbjct: 191 VVK-VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLK 249
Query: 243 GLGSR---RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK 299
GSR R + + T + G V+ +G + QLG ++ P+ ++S K
Sbjct: 250 SRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNS 309
Query: 300 I---IAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
+ + HT + G+ ++ G G+LG G + P ++ L V
Sbjct: 310 TKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG-EGAEEKSIPTLISRLPAVSSVA 368
Query: 357 VAAA 360
A+
Sbjct: 369 CGAS 372
Score = 40 (19.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 428 RCQQLYSMCGRNVVSIS---AGKYWTAAVTATGDVY 460
+C L S R V G Y+T A++ G VY
Sbjct: 244 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY 279
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 203 (76.5 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 80/299 (26%), Positives = 132/299 (44%)
Query: 152 SVATEVFSW-----GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V E+++W G+ + QLG G+ + P V+ L G I+ +S +V VT
Sbjct: 385 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDE 444
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G++Y +G G +G D +G V+ P ++ L S V+ ++ +H V+ T
Sbjct: 445 GQLYAFGSDYYGCMG---VDKVAGPE-VLEPMQLNFFL-SNPVEQVSCGDNHVVVLTRNK 499
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCN 325
EV++WG G+LG S + TP++V K L I+AV T ++++SG+V G N
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 326 REGQLGY-----GTSN-SASNYTPRVVESLKGKDLV-----GVAAAKYHTIVLGADGERV 374
+LG G N A + P K L +A K HT + G +
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 619
Query: 375 IVARNLKKSGSTPLKFHRK---IKL--------HVVSIAAGMVHSTALTEDGALFYWAS 422
N K G + ++K I L V+ ++ G + A T+D +F W +
Sbjct: 620 TFGCN--KCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN 676
Score = 188 (71.2 bits), Expect = 8.6e-11, Sum P(3) = 8.6e-11
Identities = 62/241 (25%), Positives = 105/241 (43%)
Query: 135 VDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLIS 194
V LL+ P + S V + + Y G G + QKL + S G + +
Sbjct: 319 VTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDV-IKS--GCSARQVC 375
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
A H VT E+YTW +GG H H +A+ P+ V L + ++ ++
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG-HGDKASYRQPKHVEK-LQGKAIRQVSC 433
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTA 311
TV T+ G+++ +GS+ G +G V P +++ L + V+ + H
Sbjct: 434 GDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVV 493
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
V++ + EV++WGC G+LG + YTP+ V+ K +V V T +L G
Sbjct: 494 VLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQKVDVPKALIIVAVQCGCDGTFLLTQSG 551
Query: 372 E 372
+
Sbjct: 552 K 552
Score = 154 (59.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 57/205 (27%), Positives = 88/205 (42%)
Query: 138 LSGPVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
LS PV QV G + V T EV+SWG G +LG + P KVD +I +
Sbjct: 478 LSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAV 537
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF--DIHSGQAAVITPRRVTSGLGSR---- 247
+ +T G+V G +LG I + +A P + L +
Sbjct: 538 QCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFY 597
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAA 305
+++TIA K HT E G + T+G N+ GQLG + + + L K +I V+
Sbjct: 598 KIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSC 657
Query: 306 ANKHTAVVSESGEVFTWGCNREGQL 330
++ T ++ +F WG G+L
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 146 (56.5 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 66/244 (27%), Positives = 103/244 (42%)
Query: 135 VDLLSGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGN-AHLQKL-PCKVDSLHG 187
V+ L G ++ V G + T+ ++++GS +G A + L P +++
Sbjct: 420 VEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLS 479
Query: 188 FVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG-HPDFDIHSGQAAVITPRRVTSGLGS 246
++ +S H V +T EVY+WG G GRLG + D ++ Q V P+ +
Sbjct: 480 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQK-VDVPKALI----- 533
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG-------------YTSVDTQPTPRRV 293
+ + T L T+ G+V G N +LG Y V +
Sbjct: 534 --IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLA 591
Query: 294 SSLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGK 352
L KI +A HTA + E G + T+GCN+ GQLG G NY R+ +L G
Sbjct: 592 KQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG------NYKKRLGINLLGG 645
Query: 353 DLVG 356
L G
Sbjct: 646 PLGG 649
Score = 59 (25.8 bits), Expect = 8.6e-11, Sum P(3) = 8.6e-11
Identities = 32/134 (23%), Positives = 54/134 (40%)
Query: 385 STPLKFHRKIKLHVV-SIAAGMVHSTALTEDGALFYWASSDPDLRCQQL----YS----- 434
+T +++ + + +IA G H+ A+ E G L + + +C QL Y
Sbjct: 585 TTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCN----KCGQLGVGNYKKRLGI 640
Query: 435 ------MCGRNVVSISAGKYWTAAVTATGDVYMW-DGKKSKDNPPLVTRLHGIKKATSVS 487
+ G+ V+ +S G +T A T ++ W +G + R HG TS
Sbjct: 641 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWP 700
Query: 488 VGETHLLIVGSLYH 501
I GSL+H
Sbjct: 701 RP-----IFGSLHH 709
Score = 42 (19.8 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 839 LVQKKDNADSLKNNCSPQTTSXXXXXXXXGGLSMFLSGALDDTPKEIALPPP 890
+V+K N+ ++++N S + GG G +D+ +E P P
Sbjct: 723 IVEKVLNSKTIRSNSSGLSIGTVFQSSSPGGGGGGGGGEEEDSQQESETPDP 774
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 192 (72.6 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 57/202 (28%), Positives = 98/202 (48%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G V+ WG G+LG D + +P V L +++V I+ + HT + T+ G
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRE------SPCHVKL-LRTQKVVYISCGEEHTAVLTKSG 76
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHT-AVVSESGEVFTWGC 324
VFT+G+ GQLG+ S++ + PRRV L ++ +A +HT A V SG ++ +GC
Sbjct: 77 GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGC 136
Query: 325 NREGQLGYGTSNSASNYTPRVVESL----KGKDLVGVAAAKYHTIV-LGADGERVIVARN 379
+GQLG T ++ + P V+ G+ KYH + + + G++ V +
Sbjct: 137 GAKGQLG--TGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCS 194
Query: 380 LKKSGSTPLKFHRKIKLHVVSI 401
++ S + F + H S+
Sbjct: 195 KYENSSPAVDFRTMNQAHYTSL 216
Score = 161 (61.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 41/125 (32%), Positives = 60/125 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGR 216
VF WG QLG + ++ PC V L + IS + H+ +T G V+T+G G
Sbjct: 26 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 85
Query: 217 GGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTV-LATEGGEVFTWGSNR 275
G+LGH + + PRRV +GS V IA + HT+ G ++ +G
Sbjct: 86 CGQLGHDSMNDE------VNPRRVLELMGSE-VTQIACGRQHTLAFVPSSGLIYAFGCGA 138
Query: 276 EGQLG 280
+GQLG
Sbjct: 139 KGQLG 143
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 206 (77.6 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 82/299 (27%), Positives = 131/299 (43%)
Query: 152 SVATEVFSW-----GSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSL 206
+V E+++W G+ + QLG G+ + P V+ L G I +S +V VT
Sbjct: 385 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDE 444
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
G++Y +G G +G D SG V+ P ++ L S V+ ++ +H V+ T
Sbjct: 445 GQLYAFGSDYYGCMG---VDKVSGPE-VLEPMQLNFFL-SNPVEQVSCGDNHVVVLTRNK 499
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCN 325
EV++WG G+LG S + TP+RV K L I+AV T ++++SG+V G N
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 326 REGQLGY-----GTSN-SASNYTPRVVESLKGKDLV-----GVAAAKYHTIVLGADGERV 374
+LG G N A + P K L +A K HT + G +
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 619
Query: 375 IVARNLKKSGSTPLKFHRK---IKL--------HVVSIAAGMVHSTALTEDGALFYWAS 422
N K G + ++K I L V+ ++ G + A T+D +F W +
Sbjct: 620 TFGCN--KCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGN 676
Score = 186 (70.5 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 62/241 (25%), Positives = 104/241 (43%)
Query: 135 VDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLIS 194
V LL+ P + S V + + Y G G + QKL + S G + +
Sbjct: 319 VTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDV-IKS--GCSARQVC 375
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAA 254
A H VT E+YTW +GG H H +A+ P+ V L + + ++
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLG-HGDKASYRQPKHVEK-LQGKAIHQVSC 433
Query: 255 AKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPT--PRRVSS-LKLKIIAVAAANKHTA 311
TV T+ G+++ +GS+ G +G V P +++ L + V+ + H
Sbjct: 434 GDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVV 493
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
V++ + EV++WGC G+LG + YTP+ V+ K +V V T +L G
Sbjct: 494 VLTRNKEVYSWGCGEYGRLGLDSEEDY--YTPQRVDVPKALIIVAVQCGCDGTFLLTQSG 551
Query: 372 E 372
+
Sbjct: 552 K 552
Score = 151 (58.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 56/205 (27%), Positives = 88/205 (42%)
Query: 138 LSGPVLQV-VGSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
LS PV QV G + V T EV+SWG G +LG + P +VD +I +
Sbjct: 478 LSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAV 537
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDF--DIHSGQAAVITPRRVTSGLGSR---- 247
+ +T G+V G +LG I + +A P + L +
Sbjct: 538 QCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFY 597
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS-LKLK-IIAVAA 305
+++TIA K HT E G + T+G N+ GQLG + + + L K +I V+
Sbjct: 598 KIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSC 657
Query: 306 ANKHTAVVSESGEVFTWGCNREGQL 330
++ T ++ +F WG G+L
Sbjct: 658 GDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 147 (56.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 65/243 (26%), Positives = 100/243 (41%)
Query: 135 VDLLSGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKL--PCKVDSLHG 187
V+ L G + V G + T+ ++++GS +G ++ P +++
Sbjct: 420 VEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLS 479
Query: 188 FVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR 247
++ +S H V +T EVY+WG G GRLG D + TP+RV +
Sbjct: 480 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG---LD---SEEDYYTPQRVDVPK-AL 532
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLG-------------YTSVDTQPTPRRVS 294
+ + T L T+ G+V G N +LG Y V +
Sbjct: 533 IIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAK 592
Query: 295 SLKL-KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKD 353
L KI +A HTA + E G + T+GCN+ GQLG G NY R+ +L G
Sbjct: 593 QLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG------NYKKRLGINLLGGP 646
Query: 354 LVG 356
L G
Sbjct: 647 LGG 649
Score = 59 (25.8 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 32/134 (23%), Positives = 54/134 (40%)
Query: 385 STPLKFHRKIKLHVV-SIAAGMVHSTALTEDGALFYWASSDPDLRCQQL----YS----- 434
+T +++ + + +IA G H+ A+ E G L + + +C QL Y
Sbjct: 585 TTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCN----KCGQLGVGNYKKRLGI 640
Query: 435 ------MCGRNVVSISAGKYWTAAVTATGDVYMW-DGKKSKDNPPLVTRLHGIKKATSVS 487
+ G+ V+ +S G +T A T ++ W +G + R HG TS
Sbjct: 641 NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWP 700
Query: 488 VGETHLLIVGSLYH 501
I GSL+H
Sbjct: 701 RP-----IFGSLHH 709
Score = 37 (18.1 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 19/76 (25%), Positives = 28/76 (36%)
Query: 826 GNVAIEYSKQSGFLVQKKDNADSLKNNCSPQTTSXXXXXXXXGGLSMF-LSGALDDTPKE 884
GN S G+L ++ +NA+ + SP S L L G +
Sbjct: 806 GNSCGASSSCPGWLRKELENAEFIPMPDSPAPLSAAFSQSEKDTLPYEELQGL------K 859
Query: 885 IALPPPPTPRSEGPAW 900
+A PP P+ AW
Sbjct: 860 VASEVPPEPQRAAGAW 875
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 193 (73.0 bits), Expect = 7.8e-11, Sum P(3) = 7.8e-11
Identities = 66/184 (35%), Positives = 92/184 (50%)
Query: 207 GEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR--RVTSGLGSRRVKTIAAAKHHTVLATE 264
GE+ T G GG D D + A + P+ ++TS S V +A HHTV+ T
Sbjct: 928 GELETGAAG-GGAATPTDLDKDPPRVAPLAPQLLQLTS---SSPVVQVACGLHHTVVLTL 983
Query: 265 GGEVFTWGSNREGQLGYTSVDTQPT--PRRVSSLKLKIIAVAAANKHTAVVSESGEVFTW 322
GEV+T+GSN+ GQLG S D QP P RV + I VAA + HT +++ G V+T+
Sbjct: 984 AGEVYTFGSNQYGQLG--SGDLQPVSGPVRVQ-VPGAISQVAAGSNHTVLLTSKGMVYTF 1040
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG-ERVIVARNLK 381
G ++GQLG S+ P+ +S G G A +G G ER N++
Sbjct: 1041 GNYQKGQLGRLPSDYGLKPPPQDDDSPVGAGSDGGAGGSPTVAPVGMPGPERSQSPANVQ 1100
Query: 382 KSGS 385
SGS
Sbjct: 1101 PSGS 1104
Score = 68 (29.0 bits), Expect = 7.8e-11, Sum P(3) = 7.8e-11
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 130 KSRTPVDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFV 189
K T +D G V VV + N+ T F +G G AH + + L V
Sbjct: 699 KKMTKID---GHV--VVHAACNN-GTSAFVTKTGKLIMYGKDTAHCDAMGFVSELLEQHV 752
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLG 221
K ++ K H VA+ + G+++++G G+ G
Sbjct: 753 TK-VALGKAHCVALNAKGQLFSFGLNNKGQCG 783
Score = 52 (23.4 bits), Expect = 7.8e-11, Sum P(3) = 7.8e-11
Identities = 29/103 (28%), Positives = 45/103 (43%)
Query: 901 GGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGKVLLSSFMTSKPIPVV 960
GG+ GS + +S QSK P NKD+ P + G +++ + V
Sbjct: 1689 GGSNAAHGSGVVTTAKSVQSK-----P--NKDK-NTPRVVGNAG--VMAKYFGDPSTSVA 1738
Query: 961 SARAQQATDGDK-STPPWAA----SGTPPSLSRPSLRNIQMQQ 998
A A+ G ST AA SGTP + + ++ NIQ+ +
Sbjct: 1739 PAMISSASSGGAPSTSASAAVAPGSGTPVT-RKTNMENIQLAE 1780
Score = 45 (20.9 bits), Expect = 5.5e-09, Sum P(4) = 5.5e-09
Identities = 29/120 (24%), Positives = 49/120 (40%)
Query: 533 NDESNNMPSAIDKDDSGVRLAPSLKSLCENVAAQCLVEPRNALQLLEISDSLG-ADDLKK 591
+D S+N ID + + + P + + N A R A I L A DL K
Sbjct: 2240 SDNSSNHTQTIDSEHN---ITPIEEHMDINWANNS----RTAALPTAIDPQLSTARDLGK 2292
Query: 592 HCEDIAIRNLDYILTVSSHSFASASLDI---LADLEKSLDLRSSESWSYRRLPTPTATFP 648
E + + L L S ++I ++E+S DLR+ +S S + + + + P
Sbjct: 2293 RIESFS-KGLMETLKFDKRSTNPFEMEIEIGATEVEESADLRNGQSQSVSQSQSQSQSVP 2351
Score = 39 (18.8 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 593 CEDIAIRNLDYILTVSSHSFASASLDILADLEKSLD 628
C I R D+ SSH F + S IL+ ++ D
Sbjct: 4145 CFGIRFRQADHQFLHSSHVFGNIS-KILSKSDEQND 4179
Score = 39 (18.8 bits), Expect = 5.5e-09, Sum P(4) = 5.5e-09
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 909 SASLREIQSEQSKIKVNQPTRNKD-QFEDPSFGRSEGKVLLSSFMTSKPIPVVSARA 964
S S+ + QS+ + +N R D +F + S +S + L S P+ V A
Sbjct: 2337 SQSVSQSQSQSQSVPINGNERTADFEFAEQSAQQSMPQHLHSD-SEEAPLEVAGMAA 2392
Score = 37 (18.1 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 7/33 (21%), Positives = 19/33 (57%)
Query: 399 VSIAAGMVHSTALTEDGALFYWASSDPDL-RCQ 430
V++++ + +LT++ +W S + D +C+
Sbjct: 4225 VTVSSRPAMAESLTDNSTETFWESDEEDRNKCK 4257
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 166 (63.5 bits), Expect = 9.5e-11, Sum P(3) = 9.5e-11
Identities = 47/170 (27%), Positives = 82/170 (48%)
Query: 204 TSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLAT 263
T LG V G G G+LG + DI + +R++ G I+A H ++ T
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGE-DI-------LERKRLSPVAGIPDAVDISAGGMHNLVLT 90
Query: 264 EGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTW 322
+ G+++++G N EG LG TS D + + L K + ++A + H+A + E G VF W
Sbjct: 91 KSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAW 150
Query: 323 GCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G R+ G + + TP ++ ++G +A+ H ++L G+
Sbjct: 151 GSFRDSHGNMGLTIDGNKRTP--IDLMEGTVCCSIASGADHLVILTTAGK 198
Score = 156 (60.0 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 72/280 (25%), Positives = 118/280 (42%)
Query: 128 DCKSRTPVDLLSGPVLQVVGSGYN-----SVATEVFSWGSGANYQLGTGNAHL---QKLP 179
D RTP+DL+ G V + SG + + A +VF+ G QLG + +
Sbjct: 165 DGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRR 224
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTS----LGEVYT---WGYGRGG--RLGHPDFDIHSG 230
K D L + + A F ++ T+ + E T W G +L H G
Sbjct: 225 GKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHET----KG 280
Query: 231 QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV-DTQPT 289
+ +TP + + L + ++ IA +HHTV+ T + G G+LG V D
Sbjct: 281 KEFALTP--IKTEL--KDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEK 336
Query: 290 PRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESL 349
P V L KI++V + V+ G++++WG QLG G + V ++
Sbjct: 337 PTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNT 396
Query: 350 KGKDLVGVAAAKYHTIVL-GADGERVIVARNLKKSGSTPL 388
+GK ++ + H I L AD + +K SGS+ +
Sbjct: 397 QGKHMLLASGGGQHAIFLVKADKQDQKENVPVKVSGSSSI 436
Score = 148 (57.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 84/327 (25%), Positives = 132/327 (40%)
Query: 119 QSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVAT---EVFSWGSGANYQLG--TGNA 173
Q G + + K +PV + V G +N V T +++S+G LG T
Sbjct: 54 QLGLGEDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSED 113
Query: 174 HLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAA 233
+ P +D L G + ISA HS + G V+ WG R G+ I +
Sbjct: 114 GSESKPDLID-LPGKAL-CISAGDSHSACLLEDGRVFAWGSFRDSH-GNMGLTIDGNKRT 170
Query: 234 VITPRR------VTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR---EGQLGYTSV 284
I + SG + T A K TV E G++ EG+ G +
Sbjct: 171 PIDLMEGTVCCSIASGADHLVILT-TAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDL 229
Query: 285 DTQPTPRRVSSLKLKIIAVAAANKHTAV-VSESGEVFTWGCNREGQLGYGTSNSASNYTP 343
+PT ++ K A+ A N T + S++ ++ G N QL + T TP
Sbjct: 230 -LRPTQLIITRAK-PFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTP 287
Query: 344 RVVESLKGKDLVGVAAAKYHTIVLGADGERVIVAR-NLKKSGSTPLK-------FHRKIK 395
E KD+ +A ++HT++L D + +V R + G +K +K+
Sbjct: 288 IKTEL---KDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLT 344
Query: 396 LHVVSIAAGMVHSTALTEDGALFYWAS 422
+VS+ G V S A+T DG L+ W S
Sbjct: 345 EKIVSVGCGEVCSYAVTIDGKLYSWGS 371
Score = 142 (55.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 53/174 (30%), Positives = 84/174 (48%)
Query: 256 KHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRR--VSSLKLKIIAVAAANKHTAVV 313
K TVL G V G+ GQLG D R V+ + + ++A H V+
Sbjct: 36 KRRTVL----GNVLVCGNGDVGQLGLGE-DILERKRLSPVAGIP-DAVDISAGGMHNLVL 89
Query: 314 SESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGER 373
++SG+++++GCN EG LG TS S P +++ L GK L ++A H+ L DG R
Sbjct: 90 TKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALC-ISAGDSHSACLLEDG-R 146
Query: 374 VIVARNLKKS-GSTPLKF--HRKIKLHVV------SIAAGMVHSTALTEDGALF 418
V + + S G+ L +++ + ++ SIA+G H LT G +F
Sbjct: 147 VFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVF 200
Score = 62 (26.9 bits), Expect = 9.5e-11, Sum P(3) = 9.5e-11
Identities = 40/164 (24%), Positives = 64/164 (39%)
Query: 381 KKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTED------GALFYWASSDPDLRC----Q 430
K+ TP+K K H IA G H+ LT D G Y D++
Sbjct: 281 KEFALTPIKTELKDIRH---IAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKP 337
Query: 431 QLYSMCGRNVVSISAGKYWTAAVTATGDVYMW-DGKKSK----DNPPLVTRLHGIKKATS 485
+ +VS+ G+ + AVT G +Y W G ++ D + + + K T
Sbjct: 338 TIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQ 397
Query: 486 VSVGETHLLIVGSLYHPIYPPNVAKNPQK----LKLNGRNDLEE 525
G+ LL G H I+ K QK +K++G + + +
Sbjct: 398 ---GKHMLLASGGGQHAIFLVKADKQDQKENVPVKVSGSSSISK 438
Score = 51 (23.0 bits), Expect = 9.5e-11, Sum P(3) = 9.5e-11
Identities = 27/116 (23%), Positives = 45/116 (38%)
Query: 794 SVSEVGSNAAKDFFDTEITEVSKKKEEDAMSEGNVAIEYSKQSGFLVQKKDNADSLKNNC 853
S+S+ +D D E V K+++++ + A SK++ +DNAD N
Sbjct: 435 SISKKDKTPPQDNVDKEAENVDKQEQKENLPAK--ASTSSKKNK--TPPQDNADKEAENV 490
Query: 854 SPQTTSXXXXXXXXGGLSMFLSGALDDTPKEIA--LPPPPTPR-SEGPAW--GGAK 904
Q + DD +E+ PTP+ ++ PA GG K
Sbjct: 491 DKQEQKENLPAKASTSSKKIKTPPQDDAAEEVEEESAQEPTPKKAKKPAAKRGGKK 546
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 176 (67.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 82/337 (24%), Positives = 149/337 (44%)
Query: 109 GHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYN-SV-ATEVFSWGSGAN- 165
G LA+ ++ S +T + + + + ++ + SG+ S+ A++ +G+G N
Sbjct: 35 GALAIPKLVANSD-DVTAGEARFPKRIAYFNTKSIKFISSGFGFSLFASKNRLYGAGINN 93
Query: 166 -YQLGTGNAHLQK-----LPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGR 219
+Q+G ++ K + K ++ G I IS+ + HS+ T+LG V+ G G+
Sbjct: 94 RFQIGGQLTNINKYQDYYISAKKINIPGDEILEISSGRAHSLIRTNLG-VFAIGDNNFGQ 152
Query: 220 LG-HPD-FDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREG 277
G +P+ D G +P S S + +I + + + G VF++G N +G
Sbjct: 153 CGRNPENMDYVVGSEE--SPLLPLSFPTSEPIISIHCSMDTSFVVDSSGAVFSFGLNEDG 210
Query: 278 QLGYTSVDTQPTPRRV-SSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTS 335
Q G + Q P +V ++ KI V+ + SE+GE+F WG GQ T
Sbjct: 211 QCGNEAYGIQWEPAKVRGDVEGSKIQKVSGSTDTLLACSENGEIFIWGQTEYGQAAGATD 270
Query: 336 NSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLKKSG------STPLK 389
N + V SL G ++ V + + + + G + + G TP +
Sbjct: 271 EIQLNTSRHVANSL-GP-IICVDSTQSSVVARNSRGNVFVWGVGVLGMGPEAESLKTPTQ 328
Query: 390 FHRKI---KLHVVSIAAGMVHSTALTEDGALFYWASS 423
+ + K+ V S++AG +A+ EDG LF W +
Sbjct: 329 MDQPLFDGKM-VTSVSAGNSCMSAINEDGRLFIWGEN 364
Score = 147 (56.8 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 50/182 (27%), Positives = 80/182 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKV-DSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
VFS+G + Q G +Q P KV + G I+ +S + +A + GE++ WG
Sbjct: 201 VFSFGLNEDGQCGNEAYGIQWEPAKVRGDVEGSKIQKVSGSTDTLLACSENGEIFIWGQT 260
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
G+ +I T R V + LG + + + + V G VF WG
Sbjct: 261 EYGQAAGATDEIQLN-----TSRHVANSLGP--IICVDSTQSSVVARNSRGNVFVWGV-- 311
Query: 276 EGQLGY-TSVDTQPTPRRVSSLKL--KII-AVAAANKHTAVVSESGEVFTWGCNREGQLG 331
G LG ++ TP ++ K++ +V+A N + ++E G +F WG NR LG
Sbjct: 312 -GVLGMGPEAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFIWGENRYSSLG 370
Query: 332 YG 333
G
Sbjct: 371 LG 372
Score = 52 (23.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 437 GRNVVSISAGKYWTAAVTATGDVYMW 462
G+ V S+SAG +A+ G +++W
Sbjct: 336 GKMVTSVSAGNSCMSAINEDGRLFIW 361
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 189 (71.6 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 110/438 (25%), Positives = 183/438 (41%)
Query: 176 QKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVI 235
Q LP +V G + I+ H + ++S G++ WG R G+ G HS + A +
Sbjct: 765 QHLP-RVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVG----HSFRIANL 819
Query: 236 TPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY--TSVDTQPTPRRV 293
+V + ++ IA + H+ G ++T+G GQLG+ + Q P RV
Sbjct: 820 --HQVDGDWPA--IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRV 875
Query: 294 SSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTS-NSASNYTPRVVESLKGK 352
+ L K+ +A HT V++++G V G GQ+G +TP + L+ +
Sbjct: 876 NGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVR 935
Query: 353 DLVGVAAAKYHTIVLGADGERVIVARNLK--KSGSTPLKFHRKIKLHVVSIAAGMVHSTA 410
D +A YH+I + D RN + K +K R +L + ST
Sbjct: 936 D---IATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTN 992
Query: 411 LTEDGALFYWASSDP--DLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWD----- 463
+ + P DL +++ N+VS++ G +A +T+ G +Y W
Sbjct: 993 GSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDY 1052
Query: 464 ----GKKSKD-NPPLVTRLHGIKKATSVSVGETHLLIV---GSLYHPIYPPNVAKNPQKL 515
G K++ P V +G K +VS+G H + GS++ + N L
Sbjct: 1053 QLGHGNKNERMEPHQVFEPNGAKWV-NVSLGNNHTIASTDDGSVF--AWGKNDFGQCGVL 1109
Query: 516 -KLNGRN-DL-EEFYEDFMFNDESNNMPSAIDKDDSGVRLAPSLKSLCENVAAQCLVEPR 572
K NG + D+ ++F+ F D MP+ D+S P L +V + L E
Sbjct: 1110 TKKNGNSADVTKKFF--FQARDGRRFMPNV---DESQFVQKPGL---IPDVRVRNLNEDG 1161
Query: 573 N-ALQLLEISDSLGADDL 589
N + EI D L A D+
Sbjct: 1162 NEGVDKEEIVDRLKASDV 1179
Score = 130 (50.8 bits), Expect = 0.00038, P = 0.00038
Identities = 42/119 (35%), Positives = 57/119 (47%)
Query: 158 FSWGSGANYQLGTG--NAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
F WG QLG G N Q +P +V+ L V + I+ + H+V +T G V G G
Sbjct: 851 FGWGVWG--QLGHGGRNNSNQLVPTRVNGLICKVTQ-IACGRAHTVVLTDTGRVLVCGSG 907
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
G++G D DI + TP LG RV+ IA +H++ TE VF WG N
Sbjct: 908 SYGQMGVDD-DIK--KVFAFTPLP----LGPLRVRDIATHYYHSICITEDNRVFEWGRN 959
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 274 NREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
+R GQLG+ S++++ PR V +L + + AVAA H+A VS+ G+++ WG N GQLG
Sbjct: 8 HRHGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 113 (44.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 167 QLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFD 226
QLG G+ ++ P V++L G ++ ++A +HS V+ G++Y WG+ G+LG P
Sbjct: 12 QLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLPSRA 71
Query: 227 IHSGQA 232
+ QA
Sbjct: 72 VAEEQA 77
Score = 106 (42.4 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 280 GYTSVDTQPTPRRVS-SLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSA 338
G + Q P + L+ + AV+ ++HTA ++ GE+ TWG + GQLG+G S
Sbjct: 97 GAAFISIQAFPALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASC 156
Query: 339 SNYTPRVVESLKGKDL 354
+ PR VE L + L
Sbjct: 157 DH--PRRVEQLWAEGL 170
Score = 100 (40.3 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
R G+LGH + S Q PR V + LG ++ +AA H+ ++GG+++ WG N
Sbjct: 9 RHGQLGHGSLE--SEQQ----PRLVEA-LGGVPMRAVAAGGWHSACVSDGGDLYVWGWNE 61
Query: 276 EGQLGYTS 283
GQLG S
Sbjct: 62 SGQLGLPS 69
Score = 93 (37.8 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 249 VKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL 296
V ++ HT T GGE+ TWG + GQLG+ + PRRV L
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQL 165
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 163 (62.4 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK---- 297
S L + V +++A +H TE G V WG N GQ G + D P+P V+ +
Sbjct: 75 STLSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETH 134
Query: 298 ----LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKD 353
++++ VA +HT +S EV+ WG QLG T N + P+ VE L G+
Sbjct: 135 PPQLVRVLNVACGAQHTLALSNKHEVWAWGSGC--QLGLVT-NVFPVWKPQKVEHLVGRY 191
Query: 354 LVGVAAAKYHTIVL 367
+V +A +H++ L
Sbjct: 192 VVQIACGAFHSLAL 205
Score = 150 (57.9 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 241 TSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL-KLK 299
TS L + R T ++ +L + EV++WG EGQLG+ + P + SL K +
Sbjct: 498 TSNLRAVRAST---SESRNLLPSLFTEVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKE 554
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAA 359
++ + A H+ ++ +V++WG + GQLG NS S P + G + VAA
Sbjct: 555 VVKITAGANHSLALTAQCQVYSWGSEKFGQLG--RMNSPST-VPNLTTVSDGIRVWDVAA 611
Query: 360 AKYHTIVLGADGE 372
+ HT++L ADG+
Sbjct: 612 GQTHTLLL-ADGD 623
Score = 142 (55.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 41/115 (35%), Positives = 64/115 (55%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKL-PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVY 210
S+ TEV+SWG G QLG G+ +L +L P + SL + I+A HS+A+T+ +VY
Sbjct: 517 SLFTEVWSWGKGHEGQLGHGD-YLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVY 575
Query: 211 TWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEG 265
+WG + G+LG + + V V+ G+ RV +AA + HT+L +G
Sbjct: 576 SWGSEKFGQLGRMN-----SPSTVPNLTTVSDGI---RVWDVAAGQTHTLLLADG 622
Score = 140 (54.3 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 41/127 (32%), Positives = 65/127 (51%)
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGE 267
EV++WG G G+LGH D+ + P + S L + V I A +H++ T +
Sbjct: 521 EVWSWGKGHEGQLGHGDY------LPRLQPLCIKS-LSKKEVVKITAGANHSLALTAQCQ 573
Query: 268 VFTWGSNREGQLG-YTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNR 326
V++WGS + GQLG S T P VS +++ VAA HT ++++ G+ +
Sbjct: 574 VYSWGSEKFGQLGRMNSPSTVPNLTTVSD-GIRVWDVAAGQTHTLLLAD-GDCYQPILYY 631
Query: 327 EG-QLGY 332
G Q+GY
Sbjct: 632 SGEQIGY 638
Score = 104 (41.7 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 53/180 (29%), Positives = 75/180 (41%)
Query: 137 LLSGPVLQV-VGSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
LLS PVL +GS + + E V+S+G + A L L + H VI
Sbjct: 29 LLSRPVLHAALGSLHGLLLIEGGQVYSFGEQPWKPVEPPPASLV-LESTLSGQH--VIS- 84
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
+SA +H AVT G V WG G+ G D V T RV +
Sbjct: 85 VSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNV 144
Query: 253 AAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLK-IIAVAAANKHT 310
A HT+ + EV+ WGS QLG T+V P++V L + ++ +A H+
Sbjct: 145 ACGAQHTLALSNKHEVWAWGSGC--QLGLVTNVFPVWKPQKVEHLVGRYVVQIACGAFHS 202
Score = 88 (36.0 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 425 PDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKK----SKDNPP-----LVT 475
P L+ + S+ + VV I+AG + A+TA VY W +K + N P L T
Sbjct: 540 PRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFGQLGRMNSPSTVPNLTT 599
Query: 476 RLHGIKKATSVSVGETHLLIV--GSLYHPI 503
GI+ V+ G+TH L++ G Y PI
Sbjct: 600 VSDGIR-VWDVAAGQTHTLLLADGDCYQPI 628
Score = 77 (32.2 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 108 FGHLAVASV-LLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVAT----EVFSWGS 162
+G V+ + S +T+ D ++ P L+ VL V +++A EV++WGS
Sbjct: 109 YGQCGVSGTDRVPSPTPVTVVDDETHPP-QLVR--VLNVACGAQHTLALSNKHEVWAWGS 165
Query: 163 GANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
G L T + K P KV+ L G + I+ FHS+A+
Sbjct: 166 GCQLGLVTNVFPVWK-PQKVEHLVGRYVVQIACGAFHSLAL 205
Score = 69 (29.3 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 23/79 (29%), Positives = 32/79 (40%)
Query: 387 PLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAG 446
PL K VV I AG HS ALT ++ W S + N+ ++S G
Sbjct: 544 PLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFGQLGRMNSPSTVPNLTTVSDG 603
Query: 447 -KYWTAAVTATGDVYMWDG 464
+ W A T + + DG
Sbjct: 604 IRVWDVAAGQTHTLLLADG 622
Score = 41 (19.5 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 729 IAKLQTKSVLERSLAELGVPIELPQ-AIAASAASPDGRG 766
+A L + + + SL LG+ + P+ + A SP +G
Sbjct: 928 LATLWVEPISDESLGLLGLKLTTPEDSFVVLATSPLEKG 966
Score = 37 (18.1 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 725 DEQQIAKLQTKSVLERSLAELGVPIELPQAIAASAASPDGR 765
DEQ + K K +L+++LAE QA +A + P R
Sbjct: 328 DEQAL-KDYLKKILDQTLAE--------QATSAGGSHPPSR 359
>UNIPROTKB|Q5ZIZ1 [details] [associations]
symbol:PPP1R12A "Protein phosphatase 1 regulatory subunit
12A" species:9031 "Gallus gallus" [GO:0000776 "kinetochore"
evidence=IEA] [GO:0004857 "enzyme inhibitor activity" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0006470 "protein
dephosphorylation" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0019208 "phosphatase regulator activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0035507
"regulation of myosin-light-chain-phosphatase activity"
evidence=IEA] [GO:0043292 "contractile fiber" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046822 "regulation of
nucleocytoplasmic transport" evidence=IEA] [GO:0051297 "centrosome
organization" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=IEA] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IEA] InterPro:IPR002110 Pfam:PF13606 PROSITE:PS50088
SMART:SM00248 GO:GO:0005813 GO:GO:0000776 GO:GO:0006470
GO:GO:0007067 GO:GO:0030155 GO:GO:0051297 GO:GO:0004857
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0045944 GO:GO:0046822 GO:GO:0043292
GO:GO:0019208 UniGene:Gga.3159 HOGENOM:HOG000290648 GO:GO:0072357
GO:GO:0035507 GeneTree:ENSGT00600000084108 EMBL:AADN02009764
EMBL:AADN02009765 EMBL:AJ720643 IPI:IPI00820927 STRING:Q5ZIZ1
Ensembl:ENSGALT00000038440 HOVERGEN:HBG071038 InParanoid:Q5ZIZ1
Uniprot:Q5ZIZ1
Length = 172
Score = 158 (60.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 43/129 (33%), Positives = 66/129 (51%)
Query: 10 GQKQTLQSPARKSSLGGVQ-KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPL 68
G + L+ P K V+ D + + S D E L LL++ G +IN N+ GLT L
Sbjct: 19 GSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTAL 77
Query: 69 HSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLED 128
H A + V +V+ L+ GA+ + D E GW LH A G+L +A L+ GA + +
Sbjct: 78 HQACIDDNVDMVKFLVENGANINQPDNE-GWIPLHAAASCGYLDIAEYLISQGAHVGAVN 136
Query: 129 CKSRTPVDL 137
+ TP+D+
Sbjct: 137 SEGDTPLDI 145
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 156 (60.0 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+V S GS + QLG + + + + LH + I+A H+VA T+ G V+ WG G
Sbjct: 7 QVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG 66
Query: 216 RG--GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GR P + A P RVT GL + + + A H+ T+ GEV+ WGS
Sbjct: 67 LASCGRRLCPGQTLPLFFTAK-EPSRVT-GLENSKAMCVLAGSDHSASLTDAGEVYVWGS 124
Query: 274 NREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAA-NKHTAVVSESG 317
N+ GQL + P P+++ + + V A + T +V+++G
Sbjct: 125 NKHGQLANEAAFL-PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTG 168
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/136 (34%), Positives = 69/136 (50%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
+T G+V + G G+LG P H + V+ P+ + L +V IAA H V A
Sbjct: 2 LTENGQVLSCGSNSFGQLGVP----HGPRRCVV-PQAIE--LHKEKVVCIAAGLRHAVAA 54
Query: 263 TEGGEVFTWGSNREG---QL--GYTS--VDTQPTPRRVSSLK-LKIIAVAAANKHTAVVS 314
T G VF WG+ +L G T T P RV+ L+ K + V A + H+A ++
Sbjct: 55 TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 315 ESGEVFTWGCNREGQL 330
++GEV+ WG N+ GQL
Sbjct: 115 DAGEVYVWGSNKHGQL 130
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 46/167 (27%), Positives = 67/167 (40%)
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSESGEV 319
+ TE G+V + GSN GQLG + P+ + K K++ +AA +H + SG V
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 320 FTWG-----CNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
F WG C R G + P V L+ + V A H+ L GE
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 375 IVARNLKKSGSTPLKF---HRKIKLH------VVSIAAGMVHSTALT 412
+ N + F +KI+ H V +I +G H A T
Sbjct: 121 VWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQT 167
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 167 (63.8 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 44/132 (33%), Positives = 63/132 (47%)
Query: 244 LGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK------ 297
L +RV +AA H+ + TE G V WG N GQ G + P P V L
Sbjct: 83 LSEQRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPP 142
Query: 298 --LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLV 355
+KI+ VA ++HT +S EV+ WG QLG TS + P+ V+ L G+ ++
Sbjct: 143 QTVKILEVACGDQHTLALSAKHEVWAWGSGC--QLGLNTSTFPV-WKPQKVDHLSGRHVL 199
Query: 356 GVAAAKYHTIVL 367
VA H++ L
Sbjct: 200 QVACGSAHSVAL 211
Score = 162 (62.1 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 37/107 (34%), Positives = 62/107 (57%)
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
EV++WG ++GQLG+ + + P V SL K ++ VAA H+ ++ +VF+WGCN
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCN 609
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
GQLG+ S + + P++ + G + + A HT++L ADG+
Sbjct: 610 TSGQLGH--MESPTTF-PQLTKLSDGIRVWDIGAGLQHTLLL-ADGD 652
Score = 159 (61.0 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 48/156 (30%), Positives = 80/156 (51%)
Query: 111 LAVASVLLQSGASITLEDCKSRT-PVDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLG 169
L++ +L Q + + R V L SG + + + S+ TEV+SWG G + QLG
Sbjct: 505 LSLPGLLSQVSPRLLRRTSRPRMRAVPLASGGIPET-DAHLPSLQTEVWSWGQGQDGQLG 563
Query: 170 TGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHS 229
G+ + P V SL+G + ++A HS+A+T+ +V++WG G+LGH +
Sbjct: 564 HGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLGHMESPTTF 623
Query: 230 GQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEG 265
Q +T +++ G+ RV I A HT+L +G
Sbjct: 624 PQ---LT--KLSDGI---RVWDIGAGLQHTLLLADG 651
Score = 73 (30.8 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 30/117 (25%), Positives = 53/117 (45%)
Query: 397 HVVSIAAGMVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAGKYWTAAVTAT 456
H+ S+ V S +DG L + P L+ + S+ G+ V+ ++AG + + A+TA
Sbjct: 543 HLPSLQTE-VWSWGQGQDGQLGH-GDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQ 600
Query: 457 GDVYMWDGKKS-----KDNP---PLVTRLHGIKKATSVSVGETHLLIV--GSLYHPI 503
V+ W S ++P P +T+L + + G H L++ G PI
Sbjct: 601 SQVFSWGCNTSGQLGHMESPTTFPQLTKLSDGIRVWDIGAGLQHTLLLADGDCIQPI 657
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 465 KKSKDNPPLVTRLHGIKKATSVSVGETHL-LIVGSLYHPI 503
++ +D+P L++R H K S+ H+ + +YH I
Sbjct: 1359 RQQRDSPELLSRSHH-KTLESLECIPQHVGPVTLEVYHTI 1397
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 328 GQLGYGTSNSASNYTPRVVESLKGK 352
G G G S S Y P + +S K K
Sbjct: 1281 GVWGTGLKMSGSYYKPSLYDSDKEK 1305
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 155 (59.6 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 45/142 (31%), Positives = 69/142 (48%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+V S GS + QLG + + + + LH + I+A H+VA T+ G V+ WG G
Sbjct: 7 QVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG 66
Query: 216 RG--GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GR P + A P RVT GL + + + A H+ T+ GEV+ WGS
Sbjct: 67 LASCGRRLCPGQTLPLFFTAK-EPSRVT-GLENSKAMCVLAGSDHSASLTDAGEVYVWGS 124
Query: 274 NREGQLGYTSVDTQPTPRRVSS 295
N+ GQL + P P+++ +
Sbjct: 125 NKHGQLANEAAFL-PVPQKIEA 145
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/136 (34%), Positives = 69/136 (50%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
+T G+V + G G+LG P H + V+ P+ + L +V IAA H V A
Sbjct: 2 LTENGQVLSCGSNSFGQLGVP----HGPRRCVV-PQAIE--LHKEKVVCIAAGLRHAVAA 54
Query: 263 TEGGEVFTWGSNREG---QL--GYTS--VDTQPTPRRVSSLK-LKIIAVAAANKHTAVVS 314
T G VF WG+ +L G T T P RV+ L+ K + V A + H+A ++
Sbjct: 55 TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 315 ESGEVFTWGCNREGQL 330
++GEV+ WG N+ GQL
Sbjct: 115 DAGEVYVWGSNKHGQL 130
Score = 111 (44.1 bits), Expect = 0.00047, P = 0.00047
Identities = 45/165 (27%), Positives = 66/165 (40%)
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSESGEV 319
+ TE G+V + GSN GQLG + P+ + K K++ +AA +H + SG V
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 320 FTWG-----CNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
F WG C R G + P V L+ + V A H+ L GE
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 375 IVARNLKKSGSTPLKF---HRKIKLH------VVSIAAGMVHSTA 410
+ N + F +KI+ H V +I +G H A
Sbjct: 121 VWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 181 (68.8 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 59/206 (28%), Positives = 96/206 (46%)
Query: 130 KSRTPVDLLSGPVLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQ-KLPCKVDSLHGF 188
++ P D L+V + V G G QLG G ++ K P V G
Sbjct: 10 QTAAPSDSTVAKKLKVSHISHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEG- 68
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRR 248
+++ + A H+V ++ G VYT+G G LG + G V P +V LG +
Sbjct: 69 IVQAV-AGGMHTVCLSDTGNVYTFGCNDEGALGRDTSE--EGSETV--PAKVD--LGEKI 121
Query: 249 VKTIAAAKHHTVLATEGGEVFTWGSNRE--GQLGYTSVDTQPT-PRRVSSLKLKIIAVAA 305
++ ++A H+ TE G V+ WGS R+ G +G + T P +V K ++ + +
Sbjct: 122 IQ-VSAGDSHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCTVPVKVPIDK-PVVKIVS 179
Query: 306 ANKHTAVVSESGEVFTWGCNREGQLG 331
N H +++ GE++T GC +GQLG
Sbjct: 180 GNDHLVMLTAHGELYTSGCGEQGQLG 205
Score = 153 (58.9 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 54/172 (31%), Positives = 76/172 (44%)
Query: 258 HTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
H E G V G GQLG V + P V+ L I+ A HT +S++
Sbjct: 27 HISHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVT-LPEGIVQAVAGGMHTVCLSDT 85
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIV 376
G V+T+GCN EG LG TS S P V+ G+ ++ V+A H+ L DG V V
Sbjct: 86 GNVYTFGCNDEGALGRDTSEEGSETVPAKVDL--GEKIIQVSAGDSHSAALTEDGG-VYV 142
Query: 377 ARNLKKSGST-----PLK---FHRKIKLH--VVSIAAGMVHSTALTEDGALF 418
+ + + P+K K+ + VV I +G H LT G L+
Sbjct: 143 WGSFRDNNGVIGLLEPMKKCTVPVKVPIDKPVVKIVSGNDHLVMLTAHGELY 194
Score = 130 (50.8 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 74/287 (25%), Positives = 120/287 (41%)
Query: 157 VFSWGSGANYQLG--TGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
V+++G LG T + +P KVD G I +SA HS A+T G VY WG
Sbjct: 88 VYTFGCNDEGALGRDTSEEGSETVPAKVDL--GEKIIQVSAGDSHSAALTEDGGVYVWGS 145
Query: 215 GR--GGRLGHPDFDIHSGQAAVITPR-----RVTSGLGSRRVKTIAAAKHHTVLATEG-- 265
R G +G + + V P ++ SG + T + + +G
Sbjct: 146 FRDNNGVIGLLE-PMKKCTVPVKVPIDKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQL 204
Query: 266 GEVFTWGSNREGQLGYTSVDTQPTPRRVSSL-KLKIIAVAAANKHTAVVSESGEVFTWGC 324
G V +NR G+ G + +P + K+ V T VS+ G V+ +G
Sbjct: 205 GRVAEHFANRGGRKGLMRL-LEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGL 263
Query: 325 NREGQLGYGTSNSASNYTPRVVESLKGKDL--VGVAAAKYHTIVLGADGERVIVAR---- 378
+ QLG ++N+ + P + S K VG + ++HT+ L ++G+ + R
Sbjct: 264 SNYHQLGTQSTNTC--FVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYG 321
Query: 379 --NLKKS-G--STPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYW 420
L K G S P + VV+ A + S A+T+ G++F W
Sbjct: 322 RLGLGKDVGEKSEPTVVPGISDVQVVACGASV--SYAVTKQGSVFSW 366
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 59/261 (22%), Positives = 113/261 (43%)
Query: 126 LEDCKSRT-PVDL-LSGPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLP 179
LE K T PV + + PV+++V G+ + + T E+++ G G QLG H
Sbjct: 156 LEPMKKCTVPVKVPIDKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHFANRG 215
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTSL--GEVYTWGYGRGGRL-GHPDFDIHS-GQAAVI 235
+ + +++ V T + G +T+ + G + G + H G +
Sbjct: 216 GRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTN 275
Query: 236 T---PRRVTSGLGSRRVKT-IAAAKHHTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTP 290
T P +++S S + +HHT+ G+ ++ G G+LG V + P
Sbjct: 276 TCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEP 335
Query: 291 RRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESL 349
V + ++++A A+ + V++ G VF+WG QLG G + + L
Sbjct: 336 TVVPGISDVQVVACGASVSYA--VTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQL 393
Query: 350 KGKDLVGVAAAKYHTIVLGAD 370
+ + ++ V++ HT++L D
Sbjct: 394 ENRVVLSVSSGGQHTVLLVKD 414
Score = 41 (19.5 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 443 ISAGKYWTAAVTATGDVYMWD-------GKKSKDNPPLVTRLHGIKKATS----VSVGET 491
+ G Y+T AV+ G VY + G +S + + +L K +T+ S G+
Sbjct: 242 VFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQH 301
Query: 492 HLLIVGS 498
H L + S
Sbjct: 302 HTLCLNS 308
Score = 38 (18.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 439 NVVSISAGKYWTAAVTATGDVYMW 462
+V ++ G + AVT G V+ W
Sbjct: 343 DVQVVACGASVSYAVTKQGSVFSW 366
>UNIPROTKB|F1P1R3 [details] [associations]
symbol:PSMD10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007253 "cytoplasmic sequestering of NF-kappaB" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043409
"negative regulation of MAPK cascade" evidence=IEA] [GO:0043518
"negative regulation of DNA damage response, signal transduction by
p53 class mediator" evidence=IEA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IEA] [GO:0045737 "positive
regulation of cyclin-dependent protein kinase activity"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0090201 "negative regulation of release of
cytochrome c from mitochondria" evidence=IEA] InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0030307
GO:GO:0015629 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0000122 GO:GO:0043518
GO:GO:0045111 GO:GO:0031398 GO:GO:0032088 GO:GO:0090201
GeneTree:ENSGT00560000077131 GO:GO:0043409 GO:GO:0045737
GO:GO:0007253 GO:GO:0070682 GO:GO:0008540 OMA:ATDHFES
EMBL:AADN02013579 IPI:IPI00577150 Ensembl:ENSGALT00000013485
Uniprot:F1P1R3
Length = 189
Score = 154 (59.3 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 41/95 (43%), Positives = 55/95 (57%)
Query: 44 ESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDG-ESGWSSL 102
E AL+ K G IN+ N G TPLH A +N+ I LL GADPDA D ES + L
Sbjct: 50 EIVKALIDK-GAPINAVNQNGCTPLHYAASKNKQEIAIMLLENGADPDATDHFES--TPL 106
Query: 103 HRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
HRA G+L + +LL+ AS+ ++D + TP+ L
Sbjct: 107 HRAAAKGNLKMIQILLRHNASVNIQDSEGNTPLHL 141
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 64/246 (26%), Positives = 112/246 (45%)
Query: 128 DCKSRTPVDLLSGP--VLQVVGSGY----NSVATEV-FSWGSGANYQLGTGNAHLQKLPC 180
D RT + + G V+ +VG G NS V +SWG+ + QLG G+ + P
Sbjct: 193 DFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQ 252
Query: 181 KVDSLH---GFVIKLISAAKFHSVAVTSLGEV-------YTWGYGRGGRLGHPDFDIHSG 230
V++ + G + I+ H+ +T E +T+G+G G+LGH S
Sbjct: 253 TVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGH-----RSN 307
Query: 231 QAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNRE-G---QLGYTSVDT 286
+++ + P V+ + ++ HT + + G V++WG R G + +T V+
Sbjct: 308 KSSSL-PEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEA 366
Query: 287 --QPTPRRVSSLKLKI---IAVAAANKHTAVVSESG-EVFTWGCNREGQLGYGTSNSASN 340
PR++S + + V+ HT +V + G ++++WG R G LG T N +
Sbjct: 367 GDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLG--TGNVSDC 424
Query: 341 YTPRVV 346
Y P +V
Sbjct: 425 YVPTLV 430
Score = 160 (61.4 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 57/198 (28%), Positives = 89/198 (44%)
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRR 248
V+ L+ H + +Y+WG G+LG D + + V T + SGL
Sbjct: 209 VVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQ-KSGL---T 264
Query: 249 VKTIAAAKHHTVLAT------EGGEV-FTWGSNREGQLGYTSVDTQPTPRRVSSLK--LK 299
V IA HHT L T +G + +T+G GQLG+ S + P VS L
Sbjct: 265 VYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAY 324
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNRE-G---QLGYGTSNSASNYTPRVVE--SLKGKD 353
+++V HT+VVS G V++WG R G + + + + PR + S + +D
Sbjct: 325 LVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRD 384
Query: 354 LVGVAAAKYHTIVLGADG 371
V V+ HT+++ DG
Sbjct: 385 PVQVSCGAAHTVLV-VDG 401
Score = 155 (59.6 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 37/110 (33%), Positives = 61/110 (55%)
Query: 246 SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY--TSVDTQPT----PRRVSSLKLK 299
SR++ ++AA + HT+ T G V++WG G+LG S + P P + +++
Sbjct: 15 SRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIR 74
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESL 349
I+ VAA H+ VS+ G V+ WG N GQLG+ NS + P ++++L
Sbjct: 75 IVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLA---PCLIKNL 121
Score = 132 (51.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 191 KLIS--AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR- 247
K+IS A + H++A+T G VY+WG G GRLG S + + G R
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGK---ESDELVPVLVEFPNQAEGDRI 73
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY 281
R+ +AA +H++ ++ G V+ WG N GQLG+
Sbjct: 74 RIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF 107
Score = 125 (49.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 49/202 (24%), Positives = 88/202 (43%)
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTI 252
+ A S+A+ ++G ++ WG + PD + ++ P + G R V +
Sbjct: 147 VKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSF--TSIPIPFPILDFHG-RTVLKV 202
Query: 253 AAAKHHTVLATEGGEV-----------FTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-- 299
A H V G++ ++WG+N GQLG +++ P+ V + K
Sbjct: 203 ACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSG 262
Query: 300 --IIAVAAANKHTAVVSESGEV-------FTWGCNREGQLGYGTSNSASNYTPRVVESL- 349
+ +A HTA+++ E +T+G GQLG+ ++ S+S P V L
Sbjct: 263 LTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSS--LPEPVSDLP 320
Query: 350 KGKDLVGVAAAKYHTIVLGADG 371
+ LV V +HT V+ ++G
Sbjct: 321 EHAYLVSVDCGLFHTSVVSSEG 342
Score = 119 (46.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 32/92 (34%), Positives = 46/92 (50%)
Query: 285 DTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPR 344
D PT L KII++AA HT ++ G V++WG G+LG T + P
Sbjct: 3 DKSPTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLG--TGKESDELVPV 60
Query: 345 VVE---SLKGKDL--VGVAAAKYHTIVLGADG 371
+VE +G + VGVAA YH++ + DG
Sbjct: 61 LVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDG 92
Score = 72 (30.4 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 367 LGADGERVI---VARNL--KKSGSTPLKFH-RKI--KLHVVSIAAGMVHSTALTEDGALF 418
LG DGE + + +NL +++ S+ L R++ L V ++ AG + S A+ G L+
Sbjct: 105 LGFDGENSLAPCLIKNLFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLW 164
Query: 419 YWAS-----SDPDLRCQ--------QLYSMCGRNVVSISAGKYWTAAVTATGDVY 460
W + S+PD R + GR V+ ++ G A+ GD++
Sbjct: 165 MWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIH 219
Score = 52 (23.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 440 VVSISAGKYWTAAVTATGDVYMWDGKKSKDNPP 472
V ++ AG + A+ G ++MW +D+ P
Sbjct: 144 VCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEP 176
Score = 49 (22.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 371 GERVIVARNLKKSGSTPLKFHRKIK-LHVVSIAAGMVHSTALTEDGALFYW 420
GE + KS S P + ++VS+ G+ H++ ++ +G ++ W
Sbjct: 297 GENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSW 347
Score = 47 (21.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 440 VVSISAGKYWTAAVTATGDVYMW 462
+VS+ G + T+ V++ G V+ W
Sbjct: 325 LVSVDCGLFHTSVVSSEGYVWSW 347
Score = 45 (20.9 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 20/84 (23%), Positives = 33/84 (39%)
Query: 291 RRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSA--SNYTPRVVES 348
R V S LK+ V A + + + G ++ WG N Q + S P +
Sbjct: 136 REVGS-DLKVCTVKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIPFPILD 193
Query: 349 LKGKDLVGVAAAKYHTIVLGADGE 372
G+ ++ VA H + L G+
Sbjct: 194 FHGRTVLKVACGDEHVVALVGPGD 217
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 180 (68.4 bits), Expect = 9.5e-10, Sum P(3) = 9.5e-10
Identities = 57/197 (28%), Positives = 92/197 (46%)
Query: 179 PCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPR 238
P ++ L G + + H + +T GEVY++G R G +F +S P
Sbjct: 32 PERLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFGK-LPWRSGPEEFCANS-------PI 83
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS--- 295
+ LG + V T+AA H TEGG V+ WG+N GQ + P P+ +S
Sbjct: 84 LENTLLG-QHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDS 142
Query: 296 -----LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLK 350
L ++++ +A +HT +S S E++ WG QLG T+ P+ VE L
Sbjct: 143 ETSPLLSVRVLQLACGEEHTLALSLSREIWAWGSGC--QLGLITTTFPVT-KPQKVEHLA 199
Query: 351 GKDLVGVAAAKYHTIVL 367
G+ ++ +A YH++ L
Sbjct: 200 GRVVLQIACGAYHSLAL 216
Score = 145 (56.1 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 49/173 (28%), Positives = 81/173 (46%)
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGE 267
EV++WG G+ G+LGH D + P V S L + V ++A HH++ T +
Sbjct: 522 EVWSWGRGKDGQLGHGDV------LPRLQPLCVKS-LDGKEVIQLSAGGHHSLALTAKSQ 574
Query: 268 VFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNRE 327
V++WGSN GQLG+T+ T PR + + AA + ++ +++ E F G
Sbjct: 575 VYSWGSNIFGQLGHTNSPTT-VPRLAKVCGDGVWSTAAGSDYSLFLADE-EDFQPGLYYC 632
Query: 328 GQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNL 380
GQ T N + N + L +G + ++ G D V+V +N+
Sbjct: 633 GQ-ETATDNLSENNCSKNPVLLLSCSKIGYIS----NVIAGGDNCLVLVDKNI 680
Score = 142 (55.0 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S+ TEV+SWG G + QLG G+ + P V SL G + +SA HS+A+T+ +VY+
Sbjct: 518 SLRTEVWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYS 577
Query: 212 WGYGRGGRLGH 222
WG G+LGH
Sbjct: 578 WGSNIFGQLGH 588
Score = 135 (52.6 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 54/194 (27%), Positives = 81/194 (41%)
Query: 235 ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN--REGQLGYTSVDTQPTPRR 292
+TP R+ GL + V A +H +L TEGGEV+++G R G + + P
Sbjct: 30 VTPERLP-GLCGKTVLQAALGTNHGLLLTEGGEVYSFGKLPWRSGPEEFCA--NSPILEN 86
Query: 293 VSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGK 352
+ L +I VAA + H V+E G V+ WG N GQ P + +
Sbjct: 87 -TLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETS 145
Query: 353 DLVGV-----AAAKYHTIVLGADGERVIVARNLKKSGST---PLKFHRKIKLH-----VV 399
L+ V A + HT+ L E + T P+ +K++ H V+
Sbjct: 146 PLLSVRVLQLACGEEHTLALSLSREIWAWGSGCQLGLITTTFPVTKPQKVE-HLAGRVVL 204
Query: 400 SIAAGMVHSTALTE 413
IA G HS AL +
Sbjct: 205 QIACGAYHSLALVQ 218
Score = 90 (36.7 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 33/100 (33%), Positives = 54/100 (54%)
Query: 109 GHLAVASV-LLQSGASITLEDCKSRTPVDLLSGPVLQVV-GSGYN---SVATEVFSWGSG 163
G AVA+ + I++ D ++ +P LLS VLQ+ G + S++ E+++WGSG
Sbjct: 121 GQCAVANQPYVPEPQPISISDSET-SP--LLSVRVLQLACGEEHTLALSLSREIWAWGSG 177
Query: 164 ANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
L T + K P KV+ L G V+ I+ +HS+A+
Sbjct: 178 CQLGLITTTFPVTK-PQKVEHLAGRVVLQIACGAYHSLAL 216
Score = 68 (29.0 bits), Expect = 9.5e-10, Sum P(3) = 9.5e-10
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 425 PDLRCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMWD----GKKSKDNPPL-VTRL 477
P L+ + S+ G+ V+ +SAG + + A+TA VY W G+ N P V RL
Sbjct: 541 PRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLGHTNSPTTVPRL 598
Score = 57 (25.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWASS--------DPDLRCQQLYSMCGRNVVSISAG 446
V+ ++AG HS ALT ++ W S+ + +L +CG V S +AG
Sbjct: 556 VIQLSAGGHHSLALTAKSQVYSWGSNIFGQLGHTNSPTTVPRLAKVCGDGVWSTAAG 612
Score = 39 (18.8 bits), Expect = 9.5e-10, Sum P(3) = 9.5e-10
Identities = 6/12 (50%), Positives = 11/12 (91%)
Query: 477 LHGIKKATSVSV 488
LHG+K+A S+++
Sbjct: 752 LHGVKEARSLAI 763
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/136 (34%), Positives = 69/136 (50%)
Query: 203 VTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLA 262
+T G+V + G G+LG P H + V+ P+ + L +V IAA H V A
Sbjct: 2 LTENGQVLSCGSNSFGQLGVP----HGPRRCVV-PQAIE--LHKEKVVCIAAGLRHAVAA 54
Query: 263 TEGGEVFTWGSNREG---QL--GYTS--VDTQPTPRRVSSLK-LKIIAVAAANKHTAVVS 314
T G VF WG+ +L G T T P RV+ L+ K + V A + H+A ++
Sbjct: 55 TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 315 ESGEVFTWGCNREGQL 330
++GEV+ WG N+ GQL
Sbjct: 115 DAGEVYVWGSNKHGQL 130
Score = 149 (57.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 43/126 (34%), Positives = 62/126 (49%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+V S GS + QLG + + + + LH + I+A H+VA T+ G V+ WG G
Sbjct: 7 QVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG 66
Query: 216 RG--GRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
GR P + A P RVT GL + + + A H+ T+ GEV+ WGS
Sbjct: 67 LASCGRRLCPGQTLPLFFTAK-EPSRVT-GLENSKAMCVLAGSDHSASLTDAGEVYVWGS 124
Query: 274 NREGQL 279
N+ GQL
Sbjct: 125 NKHGQL 130
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 36/125 (28%), Positives = 52/125 (41%)
Query: 261 LATEGGEVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSESGEV 319
+ TE G+V + GSN GQLG + P+ + K K++ +AA +H + SG V
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 60
Query: 320 FTWG-----CNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERV 374
F WG C R G + P V L+ + V A H+ L GE
Sbjct: 61 FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 120
Query: 375 IVARN 379
+ N
Sbjct: 121 VWGSN 125
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 170 (64.9 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHH 258
H V +T GEVY++G L P + S + +P + S L V T+A H
Sbjct: 52 HGVLLTEDGEVYSFG-----TL--P-WKSESAEICPSSPL-LESALVGHHVITVATGSFH 102
Query: 259 TVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS--------SLKLKIIAVAAANKHT 310
+ TE G V+ WG N GQ + P P VS SL ++I+ +A +HT
Sbjct: 103 SGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEEHT 162
Query: 311 AVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
+S S E++ WG QLG T+ P+ VE L G+ ++ VA +H++ L
Sbjct: 163 LALSLSREIWAWGTGC--QLGLITTTFPVT-KPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 145 (56.1 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 54/176 (30%), Positives = 84/176 (47%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S+ TEV++WG G QLG G+ + P V L G + + A HS+A+T+ +VY+
Sbjct: 517 SLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYS 576
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPR--RVTSGLGSRRVKTIAAAKHHTVLATEGGEVF 269
WG G+LGH +F PR +V+S G V ++AA + +++ + E F
Sbjct: 577 WGSNTFGQLGHSEFP-------TTVPRLSKVSSENG---VWSVAAGQDYSLFLVDT-EDF 625
Query: 270 TWGSNREGQLGYTSVDTQP-------TPRRVSSLKLKIIAVAAANK--HTAVVSES 316
G G+ DT P TP +S KL I+ A K + A+V ++
Sbjct: 626 QPGLYYSGRQDRAEGDTLPENPSGTKTPVLLSCSKLGYISRVTAGKDSYLALVDKN 681
Score = 131 (51.2 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 54/193 (27%), Positives = 89/193 (46%)
Query: 208 EVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGE 267
EV+TWG G+ G+LGH D + P V L + V + A H++ T +
Sbjct: 521 EVWTWGKGKEGQLGHGDV------LPRLQPLCVKC-LDGKEVIHLEAGGSHSLALTAKSQ 573
Query: 268 VFTWGSNREGQLGYTSVDTQ-PTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNR 326
V++WGSN GQLG++ T P +VSS + + +VAA ++ + ++ E F G
Sbjct: 574 VYSWGSNTFGQLGHSEFPTTVPRLSKVSS-ENGVWSVAAGQDYSLFLVDT-EDFQPGLYY 631
Query: 327 EGQL--GYGTS---NSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARNLK 381
G+ G + N + TP ++ K + V A K + L D + +L
Sbjct: 632 SGRQDRAEGDTLPENPSGTKTPVLLSCSKLGYISRVTAGKDSYLAL-VDKNIMGYIASLH 690
Query: 382 KSGSTPLKFHRKI 394
+ ST +F+ K+
Sbjct: 691 ELASTERRFYSKL 703
Score = 130 (50.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 56/206 (27%), Positives = 89/206 (43%)
Query: 227 IHSGQAAV--ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV 284
+H QA +TP R+ G G + V A H VL TE GEV+++G+ L + S
Sbjct: 20 VHVWQAGSFSLTPERLP-GWGGKTVLQAALGVRHGVLLTEDGEVYSFGT-----LPWKSE 73
Query: 285 DTQ--PTPRRVSSLKL--KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASN 340
+ P+ + S + +I VA + H+ V+ESG V+ WG N GQ
Sbjct: 74 SAEICPSSPLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPE 133
Query: 341 YTP-RVVESLKGKDL----VGVAAAKYHTIVLGADGERVIVARNLKKSGST---PLKFHR 392
+P + +S L + +A + HT+ L E + T P+ +
Sbjct: 134 PSPVSISDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGCQLGLITTTFPVTKPQ 193
Query: 393 KIKLH-----VVSIAAGMVHSTALTE 413
K++ H V+ +A G HS AL +
Sbjct: 194 KVE-HLAGRVVLQVACGAFHSLALVQ 218
Score = 103 (41.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 56/206 (27%), Positives = 88/206 (42%)
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTA---VVSESGEVFTWGCNREG 328
GS R G S + R+ + +K + + + A + S EV+TWG +EG
Sbjct: 472 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 531
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSGST- 386
QLG+G + P V+ L GK+++ + A H++ L A + N + G +
Sbjct: 532 QLGHG--DVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSE 589
Query: 387 -PLKFHRKIKLH----VVSIAAGMVHSTAL--TED--GALFYWASSDPDLRCQQLYSMCG 437
P R K+ V S+AAG +S L TED L+Y D + G
Sbjct: 590 FPTTVPRLSKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDRAEGDTLPENPSG 649
Query: 438 -RNVVSISAGKY-WTAAVTATGDVYM 461
+ V +S K + + VTA D Y+
Sbjct: 650 TKTPVLLSCSKLGYISRVTAGKDSYL 675
Score = 85 (35.0 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 50/194 (25%), Positives = 84/194 (43%)
Query: 17 SPARKSSLGG-VQKDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPL-HSAIWR 74
+P R GG L VR G L + + S I +PL SA+
Sbjct: 31 TPERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFGTLPWKSESAEICPSSPLLESALVG 90
Query: 75 NQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASV-LLQSGASITLEDCKSRT 133
+ V V A G+ ESG + G AVA+ + + +++ D ++ +
Sbjct: 91 HHVITV----ATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSET-S 145
Query: 134 PVDLLSGPVLQVV-GSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFV 189
P L+ +LQ+ G + S++ E+++WG+G L T + K P KV+ L G V
Sbjct: 146 PS--LAVRILQLACGEEHTLALSLSREIWAWGTGCQLGLITTTFPVTK-PQKVEHLAGRV 202
Query: 190 IKLISAAKFHSVAV 203
+ ++ FHS+A+
Sbjct: 203 VLQVACGAFHSLAL 216
Score = 62 (26.9 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 22/79 (27%), Positives = 33/79 (41%)
Query: 428 RCQQLYSMC--GRNVVSISAGKYWTAAVTATGDVYMWDGKK-----SKDNPPLVTRLHGI 480
R Q L C G+ V+ + AG + A+TA VY W + P V RL +
Sbjct: 541 RLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVPRLSKV 600
Query: 481 KKAT---SVSVGETHLLIV 496
SV+ G+ + L +
Sbjct: 601 SSENGVWSVAAGQDYSLFL 619
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 975 PPWAASGTPPSLSRPSLRNIQMQQGKQHCL---SHS-PKTRTAGFSIAPSQGSPSDSP 1028
PP P ++ S I M + H + SH P T S A SP+ SP
Sbjct: 221 PPQDLKPVPERCNQCSQLLITMTDKEDHVIISDSHCCPLGVTLSESQAEKHASPAPSP 278
Score = 37 (18.1 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 435 MCGRNVVSISAGKYWTAAVTAT---GDVYMWDGKKSKDNPPL 473
MCG+ V S ++G+ + G + GK + +P +
Sbjct: 1103 MCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSSPSM 1144
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 160 (61.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 47/120 (39%), Positives = 63/120 (52%)
Query: 258 HTVLATEGGEVFTWGSNREGQLGY-TSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
H +TE G V T G GQLG +V + P VS + ++ A HT +S+S
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSKS 93
Query: 317 GEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIV 376
G+V+++GCN EG LG TS S P VE L+ K +V V+A HT L DG RV +
Sbjct: 94 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEK-VVQVSAGDSHTAALTDDG-RVFL 150
Score = 144 (55.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 43/131 (32%), Positives = 68/131 (51%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVIT-PRRVTSGLGSRRVKTIAAAKH 257
H T G V T G G G+LG + + + A+++ P V A
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQA---------EAGGM 85
Query: 258 HTVLATEGGEVFTWGSNREGQLGY-TSVD-TQPTPRRVSSLKLKIIAVAAANKHTAVVSE 315
HTV ++ G+V+++G N EG LG TSV+ ++ P +V L+ K++ V+A + HTA +++
Sbjct: 86 HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTD 144
Query: 316 SGEVFTWGCNR 326
G VF WG R
Sbjct: 145 DGRVFLWGSFR 155
Score = 125 (49.1 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 47/151 (31%), Positives = 71/151 (47%)
Query: 130 KSRTP-VDLLSGPVLQVVGSGYNSVATE---VFSWGSGANYQLGTG-NAHLQKLPCKVDS 184
K R+P D + P + V + S +TE V + G G QLG G N +K P V S
Sbjct: 16 KRRSPPADAI--PKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALV-S 72
Query: 185 LHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGL 244
+ V++ A H+V ++ G+VY++G G LG D + + + P +V
Sbjct: 73 IPEDVVQA-EAGGMHTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSE---MVPGKVEL-- 125
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
+V ++A HT T+ G VF WGS R
Sbjct: 126 -QEKVVQVSAGDSHTAALTDDGRVFLWGSFR 155
Score = 121 (47.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 43/151 (28%), Positives = 70/151 (46%)
Query: 285 DTQPTPRRVSSLKLKII-AVAAANK----HTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
D + +P+R++ + A+ + K H + +E G V T G GQLG G N
Sbjct: 6 DRKMSPKRIAKRRSPPADAIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLG-ENVME 64
Query: 340 NYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE--------RVIVARNLKKSGSTPLKFH 391
P +V S+ +D+V A HT+ L G+ + R+ GS +
Sbjct: 65 RKKPALV-SIP-EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGK 122
Query: 392 RKIKLHVVSIAAGMVHSTALTEDGALFYWAS 422
+++ VV ++AG H+ ALT+DG +F W S
Sbjct: 123 VELQEKVVQVSAGDSHTAALTDDGRVFLWGS 153
Score = 84 (34.6 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 296 LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
L + ++ VA+ N H +++ G+++T GC +GQLG
Sbjct: 206 LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
Score = 41 (19.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 440 VVSISAGKYWTAAVTATGDVY 460
VV +++G +TA GD+Y
Sbjct: 210 VVKVASGNDHLVMLTADGDLY 230
>FB|FBgn0261881 [details] [associations]
symbol:l(2)35Be "lethal (2) 35Be" species:7227 "Drosophila
melanogaster" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
EMBL:AY070830 UniGene:Dm.436 ProteinModelPortal:Q7K028 PaxDb:Q7K028
PRIDE:Q7K028 FlyBase:FBgn0261881 InParanoid:Q7K028
ArrayExpress:Q7K028 Bgee:Q7K028 Uniprot:Q7K028
Length = 236
Score = 158 (60.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 37/117 (31%), Positives = 64/117 (54%)
Query: 21 KSSLGGVQKDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIV 80
K+ +++ + AV E +++V +LK + +N+++ G TPLH A + N V +
Sbjct: 63 KNPQSSIERMILWAVNENRISEVRE---ILKLDADTVNAKDNDGYTPLHRAAYNNFVDMA 119
Query: 81 RRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
+ LL A+P+AR E GW+ LH A + + A +LLQ GA + E +TP+ +
Sbjct: 120 KLLLQYHANPNART-ELGWTPLHSACKWNNADCAHLLLQFGADVNAESDGKQTPLHI 175
>UNIPROTKB|Q90623 [details] [associations]
symbol:PPP1R12A "Protein phosphatase 1 regulatory subunit
12A" species:9031 "Gallus gallus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=ISS] [GO:0071889 "14-3-3 protein binding" evidence=ISS]
[GO:0019208 "phosphatase regulator activity" evidence=ISS]
[GO:0035507 "regulation of myosin-light-chain-phosphatase activity"
evidence=ISS] [GO:0030155 "regulation of cell adhesion"
evidence=ISS] InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248
GO:GO:0005737 GO:GO:0030155 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0071889 GO:GO:0019208 EMBL:D37985 EMBL:D37986 EMBL:S74623
IPI:IPI00594709 IPI:IPI00602631 PIR:A55142 RefSeq:NP_990454.1
UniGene:Gga.3159 PDB:1S70 PDBsum:1S70 ProteinModelPortal:Q90623
SMR:Q90623 IntAct:Q90623 STRING:Q90623 PRIDE:Q90623 GeneID:396020
KEGG:gga:396020 CTD:4659 HOGENOM:HOG000290648 HOVERGEN:HBG052561
KO:K06270 OrthoDB:EOG4R7V9D EvolutionaryTrace:Q90623
NextBio:20816082 GO:GO:0072357 GO:GO:0035507 InterPro:IPR017401
PIRSF:PIRSF038141 Uniprot:Q90623
Length = 1004
Score = 158 (60.7 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 43/129 (33%), Positives = 66/129 (51%)
Query: 10 GQKQTLQSPARKSSLGGVQ-KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPL 68
G + L+ P K V+ D + + S D E L LL++ G +IN N+ GLT L
Sbjct: 19 GSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTAL 77
Query: 69 HSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLED 128
H A + V +V+ L+ GA+ + D E GW LH A G+L +A L+ GA + +
Sbjct: 78 HQACIDDNVDMVKFLVENGANINQPDNE-GWIPLHAAASCGYLDIAEYLISQGAHVGAVN 136
Query: 129 CKSRTPVDL 137
+ TP+D+
Sbjct: 137 SEGDTPLDI 145
Score = 67 (28.6 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 40/203 (19%), Positives = 84/203 (41%)
Query: 807 FDTEITEVSKKKEE---DAMSEGNVAIEYSKQSGFLVQ---------KKDNADSLKNNCS 854
F T T+VS K+EE ++ + + + + G L + +KD+A +++ S
Sbjct: 409 FPTSTTKVSPKEEERKDESPASWRLGLRKTGSYGALAEITASKEAQKEKDSAGVIRSASS 468
Query: 855 PQ-TTSXXXXXXXXGGLSMFLSGALDDTPKEIALPPPPTPRSEGPAWGGAKVPKGSA-SL 912
P+ ++S G L+ P+ +A E + + GS+ +
Sbjct: 469 PRLSSSLDNKEKEKDGKGTRLAYVAPTIPRRLA-STSDIDEKENRDSSASSIRSGSSYAR 527
Query: 913 REIQSEQSKIKVNQ-PTRNKDQFE-DPSFGRSEGKVLLSSFMTSKPIPVVSARAQQATDG 970
R+ + + K +N+ PT ++ SFGR + ++ S+ ++ SA Q+
Sbjct: 528 RKWEEDVKKNSLNEGPTSLNTSYQRSGSFGRRQDDLVSSNVPSTASTVTSSAGLQKTLPA 587
Query: 971 DKSTPPWAASGTPPSLSRPSLRN 993
+T + +G+ + + S N
Sbjct: 588 SANTTTKSTTGSTSAGVQSSTSN 610
Score = 63 (27.2 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 34/124 (27%), Positives = 47/124 (37%)
Query: 214 YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGE---VFT 270
Y R G G D+ S T VTS G + KT+ A+ + T +T G V +
Sbjct: 550 YQRSGSFGRRQDDLVSSNVPS-TASTVTSSAGLQ--KTLPASANTTTKSTTGSTSAGVQS 606
Query: 271 WGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
SNR T + P V+ + AAA + SG V + RE +
Sbjct: 607 STSNRLWAEDSTEKEKDSVPTAVTVPVAPSVVNAAATTTAMTTATSGTVSSTSEVRERRR 666
Query: 331 GYGT 334
Y T
Sbjct: 667 SYLT 670
Score = 39 (18.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 903 AKVPKGSASLREIQSEQS--KIKVNQPTRNKDQFEDPSFGRSEGKV 946
A+ K A L + E + K+++ + T+ +++F D S E +V
Sbjct: 940 AENEKLKAQLHDTNMELTDLKLQLEKTTQRQERFADRSLLEMEKRV 985
Score = 39 (18.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 995 QMQQGKQHCLSHSPKTRTAGFSIAPSQGSPSDSPGMNRWFKPEAETPSSIRSIQMEEKAM 1054
+ + K L+++ T T S+ +PS + G P + P+S + +E+
Sbjct: 368 EAETDKAKTLANANTTSTQSASMT----APSVAGGQGTPTSPLKKFPTSTTKVSPKEEER 423
Query: 1055 KD 1056
KD
Sbjct: 424 KD 425
>UNIPROTKB|F1NA71 [details] [associations]
symbol:PPP1R12A "Protein phosphatase 1 regulatory subunit
12A" species:9031 "Gallus gallus" [GO:0000776 "kinetochore"
evidence=IEA] [GO:0004857 "enzyme inhibitor activity" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0006470 "protein
dephosphorylation" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0019208 "phosphatase regulator activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0035507
"regulation of myosin-light-chain-phosphatase activity"
evidence=IEA] [GO:0043292 "contractile fiber" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046822 "regulation of
nucleocytoplasmic transport" evidence=IEA] [GO:0051297 "centrosome
organization" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=IEA] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IEA] InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248
GO:GO:0005813 GO:GO:0000776 GO:GO:0006470 GO:GO:0007067
GO:GO:0030155 GO:GO:0051297 GO:GO:0004857 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045944 GO:GO:0046822 GO:GO:0043292 GO:GO:0019208
GO:GO:0072357 GO:GO:0035507 InterPro:IPR017401 PIRSF:PIRSF038141
GeneTree:ENSGT00600000084108 OMA:KDYDGWT EMBL:AADN02009764
EMBL:AADN02009765 IPI:IPI00818771 Ensembl:ENSGALT00000016808
ArrayExpress:F1NA71 Uniprot:F1NA71
Length = 1029
Score = 158 (60.7 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 43/129 (33%), Positives = 66/129 (51%)
Query: 10 GQKQTLQSPARKSSLGGVQ-KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPL 68
G + L+ P K V+ D + + S D E L LL++ G +IN N+ GLT L
Sbjct: 19 GSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTAL 77
Query: 69 HSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLED 128
H A + V +V+ L+ GA+ + D E GW LH A G+L +A L+ GA + +
Sbjct: 78 HQACIDDNVDMVKFLVENGANINQPDNE-GWIPLHAAASCGYLDIAEYLISQGAHVGAVN 136
Query: 129 CKSRTPVDL 137
+ TP+D+
Sbjct: 137 SEGDTPLDI 145
Score = 67 (28.6 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 40/203 (19%), Positives = 84/203 (41%)
Query: 807 FDTEITEVSKKKEE---DAMSEGNVAIEYSKQSGFLVQ---------KKDNADSLKNNCS 854
F T T+VS K+EE ++ + + + + G L + +KD+A +++ S
Sbjct: 409 FPTSTTKVSPKEEERKDESPASWRLGLRKTGSYGALAEITASKEAQKEKDSAGVIRSASS 468
Query: 855 PQ-TTSXXXXXXXXGGLSMFLSGALDDTPKEIALPPPPTPRSEGPAWGGAKVPKGSA-SL 912
P+ ++S G L+ P+ +A E + + GS+ +
Sbjct: 469 PRLSSSLDNKEKEKDGKGTRLAYVAPTIPRRLA-STSDIDEKENRDSSASSIRSGSSYAR 527
Query: 913 REIQSEQSKIKVNQ-PTRNKDQFE-DPSFGRSEGKVLLSSFMTSKPIPVVSARAQQATDG 970
R+ + + K +N+ PT ++ SFGR + ++ S+ ++ SA Q+
Sbjct: 528 RKWEEDVKKNSLNEGPTSLNTSYQRSGSFGRRQDDLVSSNVPSTASTVTSSAGLQKTLPA 587
Query: 971 DKSTPPWAASGTPPSLSRPSLRN 993
+T + +G+ + + S N
Sbjct: 588 SANTTTKSTTGSTSAGVQSSTSN 610
Score = 63 (27.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 34/124 (27%), Positives = 47/124 (37%)
Query: 214 YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGE---VFT 270
Y R G G D+ S T VTS G + KT+ A+ + T +T G V +
Sbjct: 550 YQRSGSFGRRQDDLVSSNVPS-TASTVTSSAGLQ--KTLPASANTTTKSTTGSTSAGVQS 606
Query: 271 WGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
SNR T + P V+ + AAA + SG V + RE +
Sbjct: 607 STSNRLWAEDSTEKEKDSVPTAVTVPVAPSVVNAAATTTAMTTATSGTVSSTSEVRERRR 666
Query: 331 GYGT 334
Y T
Sbjct: 667 SYLT 670
Score = 39 (18.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 995 QMQQGKQHCLSHSPKTRTAGFSIAPSQGSPSDSPGMNRWFKPEAETPSSIRSIQMEEKAM 1054
+ + K L+++ T T S+ +PS + G P + P+S + +E+
Sbjct: 368 EAETDKAKTLANANTTSTQSASMT----APSVAGGQGTPTSPLKKFPTSTTKVSPKEEER 423
Query: 1055 KD 1056
KD
Sbjct: 424 KD 425
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 166 (63.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 50/204 (24%), Positives = 99/204 (48%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFV-IKLISAAKFHSVAVTSLGEVYTWGYG 215
VF+WG+G QLG +L G +K I++ + H A+T ++ +WG
Sbjct: 242 VFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLN 301
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
+ G+ G + D+ G A V P+R+ + +++IAA +HH+++ ++ G++++ G
Sbjct: 302 QFGQCGVSE-DVEDG-ALVTKPKRLALP-DNVVIRSIAAGEHHSLILSQDGDLYSCGRLD 358
Query: 276 EGQLG--------YTSVDTQ------PTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFT 321
++G YT D P P +++++ K +VAA + H+ V+++G ++
Sbjct: 359 MFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVP-KFKSVAAGSHHSVAVAQNGIAYS 417
Query: 322 WGCNREGQLGYGTSNSASNYTPRV 345
WG +G G + R+
Sbjct: 418 WGFGETYAVGLGPFEDDTEVPTRI 441
Score = 160 (61.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 48/178 (26%), Positives = 88/178 (49%)
Query: 156 EVFSWGSGANYQ--LG--TGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
EV++WG+ + LG +QK P KV + + I ++ K H + + G V+
Sbjct: 185 EVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFA 244
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G+ +LG + + + PR G R VK IA+ ++H T+ ++ +W
Sbjct: 245 WGNGQQNQLGRKVMERF--RLKTLDPRP----FGLRHVKYIASGENHCFALTKDNKLVSW 298
Query: 272 GSNREGQLGYTSVDTQP-----TPRRVSSLKLKII-AVAAANKHTAVVSESGEVFTWG 323
G N+ GQ G S D + P+R++ +I ++AA H+ ++S+ G++++ G
Sbjct: 299 GLNQFGQCG-VSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCG 355
Score = 152 (58.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 52/194 (26%), Positives = 87/194 (44%)
Query: 187 GFVIKLISAAKFHSVAVTSLGEVYTWGYGR--GGRLGHPDFDIHSGQAAVITPRRVTSGL 244
G + ++A S A+ S GEVY WG R G LG I + TP +V +
Sbjct: 164 GHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQK----TPWKVPT-F 218
Query: 245 GSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDT--QPT--PRRVSSLKLKI 300
+ +A K H + E G VF WG+ ++ QLG ++ T PR +K
Sbjct: 219 SKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKY 278
Query: 301 IAVAAANKHTAVVSESGEVFTWGCNREGQLGYG--TSNSASNYTPRVVESLKGKDLVGVA 358
IA + H +++ ++ +WG N+ GQ G + A P+ + + +A
Sbjct: 279 IA--SGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIA 336
Query: 359 AAKYHTIVLGADGE 372
A ++H+++L DG+
Sbjct: 337 AGEHHSLILSQDGD 350
Score = 138 (53.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 77/269 (28%), Positives = 113/269 (42%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNR--EGQLGY--TSVDTQPTPRRVSSL-KLKIIA 302
+V +AA + + GEV+ WG+ R EG LG+ + Q TP +V + K I+
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQ 225
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYT--PRVVESLKGKDLVGVAAA 360
+A H + E G VF WG ++ QLG T PR L+ + +A+
Sbjct: 226 LAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF-GLR--HVKYIASG 282
Query: 361 KYHTIVLGADGERVIVARNL---------KKSGSTPLKFHR-KIKLHVV--SIAAGMVHS 408
+ H L D + V N + G+ K R + +VV SIAAG HS
Sbjct: 283 ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHS 342
Query: 409 TALTEDGALFYWASSDPDLRCQQLYSMCGR-NVVSISAGKYWTAAVTATGDVYMWDGKKS 467
L++DG LYS CGR ++ + K T DV+ GK
Sbjct: 343 LILSQDG---------------DLYS-CGRLDMFEVGIPKDNLPEYTYK-DVH---GKAR 382
Query: 468 KDNPPLVTRLHGIKKATSVSVGETHLLIV 496
PL T+L+ + K SV+ G H + V
Sbjct: 383 A--VPLPTKLNNVPKFKSVAAGSHHSVAV 409
Score = 77 (32.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 150 YNSVAT-EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFV----IKLISAAK--FHSVA 202
Y SV ++F WG+G+ +LG G K K L+ F+ K+IS A H++A
Sbjct: 40 YLSVQPLDIFCWGTGSMCELGLGPLAKNK-EVKRPRLNPFLPRDEAKIISFAVGGMHTLA 98
Query: 203 VTSLGEVYTWGYGRGGRLG 221
+ V++WG G LG
Sbjct: 99 LDEESNVWSWGCNDVGALG 117
Score = 65 (27.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 31/110 (28%), Positives = 43/110 (39%)
Query: 173 AHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQA 232
AH K K + H +I K ++V L +++ WG G LG +
Sbjct: 15 AHRAKKMSKTHASH--IINAQEDYKHMYLSVQPL-DIFCWGTGSMCELGLGPL---AKNK 68
Query: 233 AVITPRRVTSGLGSRRVKTI--AAAKHHTVLATEGGEVFTWGSNREGQLG 280
V PR + L K I A HT+ E V++WG N G LG
Sbjct: 69 EVKRPR-LNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALG 117
Score = 53 (23.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 400 SIAAGMVHSTALTEDGALFYW 420
S+AAG HS A+ ++G + W
Sbjct: 398 SVAAGSHHSVAVAQNGIAYSW 418
Score = 46 (21.3 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 442 SISAGKYWTAAVTATGDVYMW 462
S++AG + + AV G Y W
Sbjct: 398 SVAAGSHHSVAVAQNGIAYSW 418
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 182 (69.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRR 248
VI ++ + H V V G Y WG G G+LG + + +A P R+ S + +
Sbjct: 453 VIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLG-----LTALEAWKHYPSRMES-VRNYH 506
Query: 249 VKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAAAN 307
V + A T+L T+ G + + GSN LG +P+ ++ L +++ VAA
Sbjct: 507 VVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGL 566
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVES-LKGKDLVGVAAAKYHTIV 366
+H +S G V+ WG + G LG G + +++ S +K K + + V
Sbjct: 567 QHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSK-IYCGPDTSAV 625
Query: 367 LGADGERVIVARN-LKKSG---STPLKFHRKIKL-HVVSIAA-GMVHSTALTEDGALF 418
L A+GE + N K G S + +K++L H V+ A HS L E G ++
Sbjct: 626 LFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPHKVTQACFSSTHSVFLVEGGYVY 683
Score = 169 (64.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 147 GSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
G G+ + T+ + S GS A+ LG P + L ++ ++A H +A+
Sbjct: 513 GDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLAL 572
Query: 204 TSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLAT 263
+ G VY WG G LG ++ Q + + S + ++ K VL
Sbjct: 573 SREGAVYVWGTSTCGALGLGNYQ----QQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFA 628
Query: 264 EGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWG 323
G E+ GSN +LG+ + T + L K+ ++ H+ + E G V+T G
Sbjct: 629 NG-ELHVCGSNDYNKLGFQR-SAKITAFKKVQLPHKVTQACFSSTHSVFLVEGGYVYTMG 686
Query: 324 CNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVA-RN-LK 381
N EGQ G NS + P +V+S+K + +V + TIV D + RN L
Sbjct: 687 RNAEGQRGIRHCNSVDH--PTLVDSVKSRYIVKANCSDQCTIVASEDNIITVWGTRNGLP 744
Query: 382 KSGST 386
GST
Sbjct: 745 GIGST 749
Score = 147 (56.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 59/230 (25%), Positives = 99/230 (43%)
Query: 115 SVLLQSGASITLEDCKSRTPVDLLSGPVLQVVG--SGYNSVATE---VFSWGSGANYQLG 169
SVL Q A T C S P+ L V+ V + V E ++WG G + QLG
Sbjct: 429 SVLYQLKAFGT---CFSMAPIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLG 485
Query: 170 -TGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIH 228
T + P +++S+ + + A ++ VT G + + G LG +
Sbjct: 486 LTALEAWKHYPSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDE---- 541
Query: 229 SGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQP 288
Q +P+ + L RV+ +AA H + + G V+ WG++ G LG + Q
Sbjct: 542 --QRNYHSPKLIAR-LADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQ 598
Query: 289 T-PRRV--SSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTS 335
P+++ S +K K + +AV+ +GE+ G N +LG+ S
Sbjct: 599 KFPQKILLSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRS 648
Score = 146 (56.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
K I+ VA ++ H VV+E G + WG GQLG T+ A + P +ES++ +V
Sbjct: 451 KAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGL-TALEAWKHYPSRMESVRNYHVVS 509
Query: 357 VAAAKYHTIVLGADGERVIVARNL--------KKSGSTPLKFHRKIKLHVVSIAAGMVHS 408
A TI++ G + N +++ +P R + V +AAG+ H
Sbjct: 510 ACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHV 569
Query: 409 TALTEDGALFYWASS 423
AL+ +GA++ W +S
Sbjct: 570 LALSREGAVYVWGTS 584
Score = 143 (55.4 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 54/183 (29%), Positives = 76/183 (41%)
Query: 157 VFSWGSGANYQLGTGN-AHLQKLPCKVDSLHGFVI-KLISAAKFHSVAVTSLGEVYTWGY 214
V+ WG+ LG GN QK P K+ H I S + + GE++ G
Sbjct: 578 VYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFANGELHVCGS 637
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN 274
+LG + V P +VT S H+V EGG V+T G N
Sbjct: 638 NDYNKLGFQRSAKITAFKKVQLPHKVTQACFSST---------HSVFLVEGGYVYTMGRN 688
Query: 275 REGQLGYTSVDTQPTPRRVSSLKLKIIAVA-AANKHTAVVSESGEVFTWGCNREGQLGYG 333
EGQ G ++ P V S+K + I A +++ T V SE + WG R G G G
Sbjct: 689 AEGQRGIRHCNSVDHPTLVDSVKSRYIVKANCSDQCTIVASEDNIITVWG-TRNGLPGIG 747
Query: 334 TSN 336
++N
Sbjct: 748 STN 750
Score = 37 (18.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 992 RNIQMQQGKQHCLS 1005
RN + Q+G +HC S
Sbjct: 687 RNAEGQRGIRHCNS 700
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 155 (59.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 64/212 (30%), Positives = 100/212 (47%)
Query: 91 DARDGESGWSSLHRALHFGHLA-VASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSG 149
D R+ ES S +L G L+ V+ LL+ A + K+RT V L+ +
Sbjct: 473 DIREEESEGGSRRLSLP-GLLSQVSPRLLRKAARV-----KTRTVV--LTPTYSGEADAL 524
Query: 150 YNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEV 209
S+ TEV++WG G QLG G+ + P V L G + + A +HS+A+T+ +V
Sbjct: 525 LPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQV 584
Query: 210 YTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVF 269
Y+WG G+LGH DF + A +V S G V ++AA + +++ + E F
Sbjct: 585 YSWGSNTFGQLGHSDFPTTVPRLA-----KVNSENG---VWSVAAGQDYSLFLVDT-EDF 635
Query: 270 TWGSNREGQLGYTSVDTQPTPRRVSSLKLKII 301
G G+L T D P S K+ ++
Sbjct: 636 QPGLCYSGRLDPTEGDN--LPENHSGTKMPVL 665
Score = 153 (58.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 42/134 (31%), Positives = 63/134 (47%)
Query: 242 SGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS------ 295
S L + V T+A HT T+ G V+ WG N GQ + P P VS
Sbjct: 91 SALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETS 150
Query: 296 --LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKD 353
L ++I+ +A +HT +S S E++ WG QLG T+ P+ VE L G+
Sbjct: 151 PLLAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVT-KPQKVEHLAGRV 207
Query: 354 LVGVAAAKYHTIVL 367
++ VA +H++ L
Sbjct: 208 VLQVACGAFHSLAL 221
Score = 128 (50.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
EV+TWG +EGQLG+ V + P V L K +I + A H+ ++ +V++WG N
Sbjct: 531 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 590
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
GQLG+ + PR+ + + VAA + +++ L
Sbjct: 591 TFGQLGHSDFPTT---VPRLAKVNSENGVWSVAAGQDYSLFL 629
Score = 119 (46.9 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 58/206 (28%), Positives = 90/206 (43%)
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTA---VVSESGEVFTWGCNREG 328
GS R G S + R+ + +K + + + A + S EV+TWG +EG
Sbjct: 482 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 541
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSGST- 386
QLG+G + P V+ L GK+++ + A YH++ L A + N + G +
Sbjct: 542 QLGHG--DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSD 599
Query: 387 -PLKFHRKIKLH----VVSIAAGMVHSTAL--TED--GALFYWASSDPDLRCQQLYSMCG 437
P R K++ V S+AAG +S L TED L Y DP + G
Sbjct: 600 FPTTVPRLAKVNSENGVWSVAAGQDYSLFLVDTEDFQPGLCYSGRLDPTEGDNLPENHSG 659
Query: 438 RNV-VSISAGKY-WTAAVTATGDVYM 461
+ V +S K + + VTA D Y+
Sbjct: 660 TKMPVLLSCSKLGYISRVTAGKDSYL 685
Score = 119 (46.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 45/173 (26%), Positives = 74/173 (42%)
Query: 146 VGSGYNSVATEVFSWGSGANYQLGT---GNAHLQKLPCK--VDS-LHGFVIKLISAAKFH 199
+G + + TEVF G Y GT + + P ++S L G + ++ FH
Sbjct: 48 LGVKHGVLLTEVFKPSDGEVYSFGTLPWRSEPAETCPSNPILESALVGQYVVTVATGSFH 107
Query: 200 SVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHT 259
+ AVT G VY WG G+ + V TS L + R+ +A + HT
Sbjct: 108 TGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQLACGEEHT 167
Query: 260 VLATEGGEVFTWGSNREGQLGYTSVDTQPT-PRRVSSLKLKIIA-VAAANKHT 310
+ + E++ WG+ QLG + T P++V L +++ VA H+
Sbjct: 168 LALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHS 218
Score = 83 (34.3 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 109 GHLAVASV-LLQSGASITLEDCKSRTPVDLLSGPVLQVV-GSGYN---SVATEVFSWGSG 163
G AVA+ + +++ D ++ +P LL+ +LQ+ G + S++ E+++WG+G
Sbjct: 126 GQCAVANQPYVPEPNPVSISDSET-SP--LLAVRILQLACGEEHTLALSLSREIWAWGTG 182
Query: 164 ANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
L T + K P KV+ L G V+ ++ FHS+A+
Sbjct: 183 CQLGLITTTFPVTK-PQKVEHLAGRVVLQVACGAFHSLAL 221
Score = 74 (31.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/79 (30%), Positives = 34/79 (43%)
Query: 428 RCQQLYSMC--GRNVVSISAGKYWTAAVTATGDVYMWDGKK-----SKDNPPLVTRLHGI 480
R Q L C G+ V+ + AG Y + A+TA VY W D P V RL +
Sbjct: 551 RLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKV 610
Query: 481 KKAT---SVSVGETHLLIV 496
SV+ G+ + L +
Sbjct: 611 NSENGVWSVAAGQDYSLFL 629
Score = 58 (25.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 50/219 (22%), Positives = 90/219 (41%)
Query: 796 SEVGSNAAKDFFDTE-ITEVSKKKEEDAMSEGNVAIEYSKQSGFLVQKK-DNADSLKNNC 853
+EV S + + DT+ + E +K + ++ E + E S LV++ N S
Sbjct: 333 TEVSSASRPSYPDTQAVNEYVQKLSDHSVRESSENGEKPVPSQPLVEEAIPNLHSPPTTS 392
Query: 854 SPQTTSXXXXXXXXGGLSM---FLSGALDDTPKEIALPPPPTPRSEGPAWGGAKV-PKGS 909
+ S G+ + + +GAL + K++ P G G + + P+G
Sbjct: 393 TSALNSLVVSCASAVGVRVAATYEAGAL--SLKKVMNFYNTAPCEPGALAGSSSIGPEGL 450
Query: 910 ASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGKVLLSSFMTSKPIPVVSARAQQATD 969
RE Q +Q ++ + + D E+ S G S ++ L ++ ++ A+ T
Sbjct: 451 KDSREEQVKQESMQGKKSSSLVDIREEESEGGSR-RLSLPGLLSQVSPRLLRKAARVKTR 509
Query: 970 GDKSTPPWAASGTPPSLSRPSLRNIQMQ--QGKQHCLSH 1006
TP + SG +L PSLR +GK+ L H
Sbjct: 510 TVVLTPTY--SGEADALL-PSLRTEVWTWGKGKEGQLGH 545
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 435 MCGRNVVSISAGKYWTAAVTAT---GDVYMWDGKKSKDNPPL 473
MCG+ V S ++G+ + G + GK + +P +
Sbjct: 1113 MCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSSPSM 1154
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 159 (61.0 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 62/213 (29%), Positives = 94/213 (44%)
Query: 171 GNAHL-QKLPCKV--DSLHGFVIKLISAAKF---HSVAVTSLGEVYTWGYGRGGRLGHPD 224
G H+ Q C V + L G+ K + A H V +T GEVY++G L P
Sbjct: 18 GLVHVWQAGSCSVTPERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFG-----TL--P- 69
Query: 225 FDIHSGQAAVITPRR--VTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYT 282
+ A + P + + L + V T+A H+ TE G V+ WG N GQ
Sbjct: 70 ---WRSEPAELCPSSPILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVA 126
Query: 283 SVDTQPTPRRVSS--------LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGT 334
+ P P VS L ++I+ +A +HT +S S E++ WG QLG T
Sbjct: 127 NQQYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLIT 184
Query: 335 SNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
+ P+ VE L G+ ++ VA +H++ L
Sbjct: 185 TTFPVT-KPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 151 (58.2 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 51/168 (30%), Positives = 81/168 (48%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S+ TEV++WG G + QLG G+ + P V L G + + A +HS+A+T+ +VY+
Sbjct: 517 SLRTEVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYS 576
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G+LGH DF + A ++ S G V ++AA + +++ + E F
Sbjct: 577 WGSNTFGQLGHSDFPTTVPRLA-----KMNSENG---VWSVAAGQDYSLFLVDT-EDFQP 627
Query: 272 GSNREGQLGYTSVDTQP-------TPRRVSSLKLKIIAVAAANKHTAV 312
G G+ T D P TP +S KL I+ A K + +
Sbjct: 628 GLYYSGRQDPTEGDNLPENHSGTKTPVLLSCSKLGYISRVTAGKDSCL 675
Score = 126 (49.4 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
EV+TWG ++GQLG+ V + P V L K +I + A H+ ++ +V++WG N
Sbjct: 521 EVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 580
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
GQLG+ + PR+ + + VAA + +++ L
Sbjct: 581 TFGQLGHSDFPTT---VPRLAKMNSENGVWSVAAGQDYSLFL 619
Score = 122 (48.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 54/206 (26%), Positives = 88/206 (42%)
Query: 227 IHSGQAAV--ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV 284
+H QA +TP R+ G ++ KH VL TE GEV+++G+ L + S
Sbjct: 20 VHVWQAGSCSVTPERLPGWTGKTVLQAALGVKHG-VLLTEDGEVYSFGT-----LPWRSE 73
Query: 285 DTQ--PT-PRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASN 340
+ P+ P ++L + ++ VA + H+ V+ESG V+ WG N GQ
Sbjct: 74 PAELCPSSPILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPE 133
Query: 341 YTPRVVESLKGKDLVGV-----AAAKYHTIVLGADGERVIVARNLKKSGST---PLKFHR 392
P + + L+ V A + HT+ L E + T P+ +
Sbjct: 134 PNPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVTKPQ 193
Query: 393 KIKLH-----VVSIAAGMVHSTALTE 413
K++ H V+ +A G HS AL +
Sbjct: 194 KVE-HLAGRVVLQVACGAFHSLALVQ 218
Score = 119 (46.9 bits), Expect = 8.4e-05, Sum P(4) = 8.4e-05
Identities = 48/168 (28%), Positives = 76/168 (45%)
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTA---VVSESGEVFTWGCNREG 328
G+ R G S + RR + +K + + + A + S EV+TWG ++G
Sbjct: 472 GTRRLSLPGLLSQVSPRLLRRAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDG 531
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSGST- 386
QLG+G + P V+ L GK+++ + A YH++ L A + N + G +
Sbjct: 532 QLGHG--DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSD 589
Query: 387 -PLKFHRKIKLH----VVSIAAGMVHSTAL--TED--GALFYWASSDP 425
P R K++ V S+AAG +S L TED L+Y DP
Sbjct: 590 FPTTVPRLAKMNSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDP 637
Score = 85 (35.0 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 109 GHLAVASV-LLQSGASITLEDCKSRTPVDLLSGPVLQVV-GSGYN---SVATEVFSWGSG 163
G AVA+ + +++ D ++ +P LL+ +LQ+ G + S++ E+++WG+G
Sbjct: 121 GQCAVANQQYVPEPNPVSISDSET-SP--LLAVRILQLACGEEHTLALSISREIWAWGTG 177
Query: 164 ANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
L T + K P KV+ L G V+ ++ FHS+A+
Sbjct: 178 CQLGLITTTFPVTK-PQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 72 (30.4 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 24/79 (30%), Positives = 34/79 (43%)
Query: 428 RCQQLYSMC--GRNVVSISAGKYWTAAVTATGDVYMWDGKK-----SKDNPPLVTRLHGI 480
R Q L C G+ V+ + AG Y + A+TA VY W D P V RL +
Sbjct: 541 RLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKM 600
Query: 481 KKAT---SVSVGETHLLIV 496
SV+ G+ + L +
Sbjct: 601 NSENGVWSVAAGQDYSLFL 619
Score = 44 (20.5 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 19/90 (21%), Positives = 36/90 (40%)
Query: 946 VLLSSFMTSKP--IPVVSARAQQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQQGKQHC 1003
+L+SS K + +S QA G PP+ +S S+ R + + + ++
Sbjct: 978 ILISSTPQEKTKWLRAISQAVDQALRGTSDLPPYGSSS---SIQR---QEPPISRSAKYT 1031
Query: 1004 LSHSPKTRTAGFSIAPSQGSPSDSPGMNRW 1033
P+ + A + G P G+ +W
Sbjct: 1032 FYKDPRLKDATYDGRWLSGKPHGR-GVLKW 1060
Score = 42 (19.8 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 457 GDVYM-WDGKKSKDNPPLVTR 476
GDV+ W ++ +D+P +++R
Sbjct: 1306 GDVWKAWGRRQHRDSPEMLSR 1326
Score = 38 (18.4 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 540 PSAIDKDDSGVRLAPSLKSLCENVAAQCL 568
P+ + ++ P+ K C + A +CL
Sbjct: 1516 PATLSVLGESKKVLPTTKDACFSSAVECL 1544
Score = 37 (18.1 bits), Expect = 5.1e-05, Sum P(4) = 5.1e-05
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 435 MCGRNVVSISAGKYWTAAVTAT---GDVYMWDGKKSKDNPPL 473
MCG+ V S ++G+ + G + GK + +P +
Sbjct: 1103 MCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSSPSM 1144
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 140 GPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLIS 194
G V+QVV G ++ T EV+S G GA+ Q G G+ ++ P K+ L G + ++
Sbjct: 227 GQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVA 286
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT-SGLGSRRVKTIA 253
+A+++ G V+ WG +L D S Q V PR + SG+G +VK +A
Sbjct: 287 TYGDCCLALSADGGVFGWGNSEYLQLASVT-D--STQVNV--PRCLPFSGVG--KVKQVA 339
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQ---LGYTSVDTQ--PTPRRVSSL--KLKIIAVAAA 306
+ E G VF WG G+ L T++ PT ++ ++K+ +
Sbjct: 340 CGGTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCG 399
Query: 307 NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
H A ++ GE+F WG N G LG G Y P V ++ G+ V VA H +
Sbjct: 400 LSHFAALTNKGELFVWGKNIRGCLGIGRLED--QYFPWRV-TMPGEP-VDVACGVDHMVT 455
Query: 367 L 367
L
Sbjct: 456 L 456
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 62/267 (23%), Positives = 112/267 (41%)
Query: 178 LPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHP--DFDIHSGQAAVI 235
+P +D + +S + HS+ +T V++ G G+ G + +++S V
Sbjct: 161 VPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKV- 219
Query: 236 TPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT--WGSNREGQLGYTSVDTQPTPRRV 293
R+ G +V + + H++ T+ GEV++ WG++ + LG+ ++ + P+
Sbjct: 220 --HRMQDFEG--QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGG 275
Query: 294 SSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE-SLKGK 352
+ ++ VA +S G VF WG + QL T ++ N PR + S GK
Sbjct: 276 DLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVN-VPRCLPFSGVGK 334
Query: 353 DLVGVAAAKYHTIVLGADGERVIVARNLKKSG----STPL------------KFHRKIKL 396
+ VA +L +G + + G T L +F+ ++K
Sbjct: 335 -VKQVACGGTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPEVK- 392
Query: 397 HVVSIAAGMVHSTALTEDGALFYWASS 423
V I G+ H ALT G LF W +
Sbjct: 393 -VSQIRCGLSHFAALTNKGELFVWGKN 418
Score = 134 (52.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 71/276 (25%), Positives = 116/276 (42%)
Query: 175 LQKLPCKVDSLHGFVIKLISAAKFHSVAVTS--LGEVY-TWGYG--RGGRLG-HPDF-DI 227
+Q +P +++ H K+ SAA + + S +V WG G + +LG H D
Sbjct: 93 IQPVPYRLELDH----KISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDK 148
Query: 228 HSGQAAVITPRRVTSGLG---SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV 284
G V+ P V L +V ++ + H+++ T+ VF+ G+N GQ G V
Sbjct: 149 TRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVV 208
Query: 285 DTQPTPR-----RVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
+ + R+ + +++ V H+ +++ GEV++ G +GQ G G N S
Sbjct: 209 EDEVYSESHKVHRMQDFEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS 268
Query: 340 NYTPRVVESLKGKDLVGVAAAKYHT-----IVLGADGERVIVARNLKK------SGSTPL 388
TP S G DL GV + T + L ADG V N + + ST +
Sbjct: 269 --TP----SKLGGDLAGVTVVQVATYGDCCLALSADGG-VFGWGNSEYLQLASVTDSTQV 321
Query: 389 KFHRKIKLH----VVSIAAGMVHSTALTEDGALFYW 420
R + V +A G L E+G +F W
Sbjct: 322 NVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVW 357
Score = 101 (40.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 273 SNREGQLGYTSV-DTQPTPRRVSS-LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
S ++ GY V + P P + + K++ V+ H+ V+++ VF+ G N GQ
Sbjct: 144 SRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQC 203
Query: 331 G--------YGTSNSA---SNYTPRVVESLKGKD--LVGVAAAKYHTIVLGADGERVIVA 377
G Y S+ ++ +VV+ + G+D L + ++ GADG+ +
Sbjct: 204 GRKVVEDEVYSESHKVHRMQDFEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGH 263
Query: 378 RNLKKSGSTPLKFHRKIK-LHVVSIAAGMVHSTALTEDGALFYWASSD 424
N+ STP K + + VV +A AL+ DG +F W +S+
Sbjct: 264 YNIT---STPSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSE 308
Score = 81 (33.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 209 VYTWGYGRGGRLGHPDFDIHS---GQAAVITPRRVTSGLGSR-----RVKTIAAAKHHTV 260
V+ WG+ G LG P F + S G A + PRR + R ++ + A T+
Sbjct: 58 VFVWGFSFSGALGVPSFVVPSSGPGPRAGLRPRRRIQPVPYRLELDHKISSAACGYGFTL 117
Query: 261 LATEGGEVF-TWGS--NREGQLGY 281
L+++ +V WG N++ QLG+
Sbjct: 118 LSSKTKDVTKVWGMGLNKDSQLGF 141
Score = 44 (20.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 21/84 (25%), Positives = 35/84 (41%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWA------------SSDPDLRCQQLYSMCGRN----VV 441
V +A G L E+G +F W ++ P++ L+ + N V
Sbjct: 335 VKQVACGGTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVS 394
Query: 442 SISAGKYWTAAVTATGDVYMWDGK 465
I G AA+T G++++W GK
Sbjct: 395 QIRCGLSHFAALTNKGELFVW-GK 417
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 168 (64.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 55/179 (30%), Positives = 84/179 (46%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRR--VTSGLGSRRVKTIAAAK 256
H V +T GEVY++G L P +AA I P + S L V T+A
Sbjct: 52 HGVLLTEDGEVYSFG-----TL--P----WKSEAAEICPSSPLLESALVGHHVVTVATGS 100
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVD--TQPTPRRVSS------LKLKIIAVAAANK 308
H+ TE G V+ WG N GQ + ++P+P +S L ++I+ +A +
Sbjct: 101 FHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEE 160
Query: 309 HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
HT +S S E++ WG QLG T+ P+ VE L G+ ++ VA +H++ L
Sbjct: 161 HTLALSISREIWAWGTGC--QLGLITTTFPVT-KPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 136 (52.9 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 56/206 (27%), Positives = 89/206 (43%)
Query: 227 IHSGQAAV--ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV 284
+H QA +TP R+ G G + V A H VL TE GEV+++G+ L + S
Sbjct: 20 VHVWQAGSFSLTPERLP-GWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWKSE 73
Query: 285 DTQ--PTPRRVSSLKL--KIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASN 340
+ P+ + S + ++ VA + H+ V+ESG V+ WG N GQ S
Sbjct: 74 AAEICPSSPLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSE 133
Query: 341 YTPRVVESLKGKDLVGV-----AAAKYHTIVLGADGERVIVARNLKKSGST---PLKFHR 392
+P + + L+ V A + HT+ L E + T P+ +
Sbjct: 134 PSPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVTKPQ 193
Query: 393 KIKLH-----VVSIAAGMVHSTALTE 413
K++ H V+ +A G HS AL +
Sbjct: 194 KVE-HLAGRVVLQVACGAFHSLALVQ 218
Score = 127 (49.8 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 32/102 (31%), Positives = 52/102 (50%)
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
EV+TWG +EGQLG+ V + P V L K +I + A H+ ++ +V++WG N
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
GQLG+ + PR+ + + VAA +++ L
Sbjct: 581 TFGQLGHSEFPTT---VPRLSKVSSESGVWSVAAGHGYSLFL 619
Score = 91 (37.1 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 31/100 (31%), Positives = 55/100 (55%)
Query: 109 GHLAVASVLLQSGAS-ITLEDCKSRTPVDLLSGPVLQVV-GSGYN---SVATEVFSWGSG 163
G AVA+ S S +++ D ++ +P LL+ +LQ+ G + S++ E+++WG+G
Sbjct: 121 GQCAVANQQYVSEPSPVSISDSET-SP--LLAVRILQLACGEEHTLALSISREIWAWGTG 177
Query: 164 ANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
L T + K P KV+ L G V+ ++ FHS+A+
Sbjct: 178 CQLGLITTTFPVTK-PQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 63 (27.2 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 22/73 (30%), Positives = 30/73 (41%)
Query: 428 RCQQLYSMC--GRNVVSISAGKYWTAAVTATGDVYMWDGKK-----SKDNPPLVTRLHGI 480
R Q L C G+ V+ + AG + A+TA VY W + P V RL +
Sbjct: 541 RLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVPRLSKV 600
Query: 481 KKATSV-SVGETH 492
+ V SV H
Sbjct: 601 SSESGVWSVAAGH 613
Score = 57 (25.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 52/221 (23%), Positives = 90/221 (40%)
Query: 795 VSEVGS-NAAKDFFDTE-ITEVSKKKEEDAMSEGNVAIEYSKQSGFLVQKK-DNADSLKN 851
++EV S A + DT+ +T +K E ++ E + E Q LV++ + S
Sbjct: 321 MAEVSSARTAPSYPDTQTVTAYLQKLSEHSVKENHEREEKLPQVQPLVEEAVPDLHSPPT 380
Query: 852 NCSPQTTSXXXXXXXXGGLSM---FLSGALDDTPKEIALPPPPTPRSEGPAWGGAKV-PK 907
+ S G+ + + +GAL + K++ P G G A P+
Sbjct: 381 TSTSALNSLVVSCASAVGVRVAATYEAGAL--SLKKVMNFYSTAPCEPGAPSGTASTGPE 438
Query: 908 GSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGKVLLSSFMTSKPIPVVSARAQQA 967
LRE Q +Q ++ + + D E+ S G S ++ L ++ ++ A+
Sbjct: 439 SLKDLREEQVKQESLQGKKSSSLMDIREEESEGGSR-RLSLPGLLSQVSPRLLRKAARVK 497
Query: 968 TDGDKSTPPWAASGTPPSLSRPSLRNIQMQ--QGKQHCLSH 1006
T TP + SG +L PSLR +GK+ L H
Sbjct: 498 TRTVVLTPTY--SGEADALL-PSLRTEVWTWGKGKEGQLGH 535
Score = 43 (20.2 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 405 MVHSTALTEDGALFYWASSDPDLRCQQLYSMCGRNVVSISAGKY--------WTAAVTAT 456
M + L+ED ++ SD +++CG+ +++ G Y W + + T
Sbjct: 1202 MGNGVLLSEDDTIYEGEFSDD-------WTLCGKGTLTMPNGDYIEGYFSGEWGSGIKIT 1254
Query: 457 GDVYMWDGKKS-KDNPPLVTRLHGIKKA 483
G + +S KD P +L + A
Sbjct: 1255 GTYFKPSLYESDKDRPKAFRKLGNLAVA 1282
Score = 37 (18.1 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 551 RLAPSLKSLCENVAAQCL 568
++ PS K C A +CL
Sbjct: 1536 KVLPSTKDACFASAVECL 1553
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 435 MCGRNVVSISAGKYWTAAVTAT---GDVYMWDGKKSKDNPPL 473
MCG+ V S ++G+ + G + GK + +P +
Sbjct: 1103 MCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSSPSM 1144
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 164 (62.8 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 66/255 (25%), Positives = 115/255 (45%)
Query: 139 SGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
SG ++ V G + + T+ + ++GSG+N LG G+ + P V++L G+ + +
Sbjct: 380 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQV 439
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
+ H +A+++ E++ WG G GGRLG + H P+ V G + +
Sbjct: 440 ACGASHVLALSTERELFAWGRGDGGRLGLGTRESHC------CPQLVPMPPGQEAQRVVC 493
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYT--SVDTQPTPRR----------VSSLKLK-- 299
+L T G+ GSNR +LG S+ +P P + + S L
Sbjct: 494 GIDSSMIL-TVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQE 552
Query: 300 -IIAVAAANKHTAVVSE-SGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGV 357
+++V H+A V+ SG+ +T+G N + S P V+ L+G + V
Sbjct: 553 PLLSVDLGTAHSAAVTXASGDCYTFGSN---------ARRVSR-APCRVQGLQGIKISTV 602
Query: 358 AAAKYHTIVLGADGE 372
A T+ +GA+GE
Sbjct: 603 ACGDAFTVAIGAEGE 617
Score = 145 (56.1 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 57/248 (22%), Positives = 97/248 (39%)
Query: 187 GFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGS 246
G IK ++ + +T G + T+G G G LGH + + P V + LG
Sbjct: 381 GVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN------DISQPTIVEALLGY 434
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAA 305
V+ A H L+TE E+F WG G+LG + ++ P+ V + V
Sbjct: 435 EMVQVACGASHVLALSTER-ELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVC 493
Query: 306 ANKHTAVVSESGEVFTWGCNREGQLGY-----GTS-------NSASNYTPRVVESLKGKD 353
+ +++ G+ G NR +LG G A +TP L +
Sbjct: 494 GIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEP 553
Query: 354 LVGVAAAKYHTI-VLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALT 412
L+ V H+ V A G+ N ++ P + + + ++A G + A+
Sbjct: 554 LLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIG 613
Query: 413 EDGALFYW 420
+G +F W
Sbjct: 614 AEGEVFSW 621
Score = 144 (55.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 42/152 (27%), Positives = 67/152 (44%)
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK- 297
R G +K +A T T+ G + T+GS G LG+ S++ P V +L
Sbjct: 374 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 433
Query: 298 LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGV 357
+++ VA H +S E+F WG G+LG GT S + P++V G++ V
Sbjct: 434 YEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRES--HCCPQLVPMPPGQEAQRV 491
Query: 358 AAAKYHTIVLGADGERVIVARN-LKKSGSTPL 388
+++L G+ + N K G PL
Sbjct: 492 VCGIDSSMILTVPGQALACGSNRFNKLGLDPL 523
Score = 136 (52.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 58/222 (26%), Positives = 90/222 (40%)
Query: 125 TLEDCKSRTPVDLLSG-PVLQVV-GSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLP 179
+L D T V+ L G ++QV G+ + S E+F+WG G +LG G P
Sbjct: 418 SLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCP 477
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDI------HSG--Q 231
V G + + S+ +T G+ G R +LG + H +
Sbjct: 478 QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEE 537
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEG-GEVFTWGSNREGQLGYTSVDTQPTP 290
A TP ++ L + ++ H+ T G+ +T+GSN P
Sbjct: 538 AVTFTPLG-SAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARR--------VSRAP 588
Query: 291 RRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
RV L+ +KI VA + T + GEVF+WG G+LG
Sbjct: 589 CRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG 630
Score = 133 (51.9 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 134 PVDLLSGPVLQV-VGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
P+D P+L V +G+ +++ T SG Y G+ + + PC+V L G I
Sbjct: 548 PLD--QEPLLSVDLGTAHSAAVTXA----SGDCYTFGSNARRVSRAPCRVQGLQGIKIST 601
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFD 226
++ +VA+ + GEV++WG G GRLG D D
Sbjct: 602 VACGDAFTVAIGAEGEVFSWGKGARGRLGRKDED 635
Score = 72 (30.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 26/106 (24%), Positives = 51/106 (48%)
Query: 398 VVSIAAGMVHSTALTE-DGALFYWASSDPDLR---CQQLYSMCGRNVVSISAGKYWTAAV 453
++S+ G HS A+T G + + S+ + C+ + + G + +++ G +T A+
Sbjct: 554 LLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCR-VQGLQGIKISTVACGDAFTVAI 612
Query: 454 TATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLIVGSL 499
A G+V+ W GK ++ G+ + V + ETH V S+
Sbjct: 613 GAEGEVFSW-GKGARGRLGRKDEDAGLPRP--VQLDETHPYTVTSV 655
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 164 (62.8 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 66/255 (25%), Positives = 115/255 (45%)
Query: 139 SGPVLQVVGSG--YNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLI 193
SG ++ V G + + T+ + ++GSG+N LG G+ + P V++L G+ + +
Sbjct: 384 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQV 443
Query: 194 SAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIA 253
+ H +A+++ E++ WG G GGRLG + H P+ V G + +
Sbjct: 444 ACGASHVLALSTERELFAWGRGDGGRLGLGTRESHC------CPQLVPMPPGQEAQRVVC 497
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQLGYT--SVDTQPTPRR----------VSSLKLK-- 299
+L T G+ GSNR +LG S+ +P P + + S L
Sbjct: 498 GIDSSMIL-TVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQE 556
Query: 300 -IIAVAAANKHTAVVSE-SGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGV 357
+++V H+A V+ SG+ +T+G N + S P V+ L+G + V
Sbjct: 557 PLLSVDLGTAHSAAVTXASGDCYTFGSN---------ARRVSR-APCRVQGLQGIKISTV 606
Query: 358 AAAKYHTIVLGADGE 372
A T+ +GA+GE
Sbjct: 607 ACGDAFTVAIGAEGE 621
Score = 145 (56.1 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 57/248 (22%), Positives = 97/248 (39%)
Query: 187 GFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGS 246
G IK ++ + +T G + T+G G G LGH + + P V + LG
Sbjct: 385 GVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLN------DISQPTIVEALLGY 438
Query: 247 RRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK-LKIIAVAA 305
V+ A H L+TE E+F WG G+LG + ++ P+ V + V
Sbjct: 439 EMVQVACGASHVLALSTER-ELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVC 497
Query: 306 ANKHTAVVSESGEVFTWGCNREGQLGY-----GTS-------NSASNYTPRVVESLKGKD 353
+ +++ G+ G NR +LG G A +TP L +
Sbjct: 498 GIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEP 557
Query: 354 LVGVAAAKYHTI-VLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALT 412
L+ V H+ V A G+ N ++ P + + + ++A G + A+
Sbjct: 558 LLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIG 617
Query: 413 EDGALFYW 420
+G +F W
Sbjct: 618 AEGEVFSW 625
Score = 144 (55.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 42/152 (27%), Positives = 67/152 (44%)
Query: 239 RVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLK- 297
R G +K +A T T+ G + T+GS G LG+ S++ P V +L
Sbjct: 378 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 437
Query: 298 LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGV 357
+++ VA H +S E+F WG G+LG GT S + P++V G++ V
Sbjct: 438 YEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRES--HCCPQLVPMPPGQEAQRV 495
Query: 358 AAAKYHTIVLGADGERVIVARN-LKKSGSTPL 388
+++L G+ + N K G PL
Sbjct: 496 VCGIDSSMILTVPGQALACGSNRFNKLGLDPL 527
Score = 136 (52.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 58/222 (26%), Positives = 90/222 (40%)
Query: 125 TLEDCKSRTPVDLLSG-PVLQVV-GSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLP 179
+L D T V+ L G ++QV G+ + S E+F+WG G +LG G P
Sbjct: 422 SLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCP 481
Query: 180 CKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDI------HSG--Q 231
V G + + S+ +T G+ G R +LG + H +
Sbjct: 482 QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEE 541
Query: 232 AAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEG-GEVFTWGSNREGQLGYTSVDTQPTP 290
A TP ++ L + ++ H+ T G+ +T+GSN P
Sbjct: 542 AVTFTPLG-SAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARR--------VSRAP 592
Query: 291 RRVSSLK-LKIIAVAAANKHTAVVSESGEVFTWGCNREGQLG 331
RV L+ +KI VA + T + GEVF+WG G+LG
Sbjct: 593 CRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG 634
Score = 133 (51.9 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 134 PVDLLSGPVLQV-VGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKL 192
P+D P+L V +G+ +++ T SG Y G+ + + PC+V L G I
Sbjct: 552 PLD--QEPLLSVDLGTAHSAAVTXA----SGDCYTFGSNARRVSRAPCRVQGLQGIKIST 605
Query: 193 ISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFD 226
++ +VA+ + GEV++WG G GRLG D D
Sbjct: 606 VACGDAFTVAIGAEGEVFSWGKGARGRLGRKDED 639
Score = 72 (30.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 26/106 (24%), Positives = 51/106 (48%)
Query: 398 VVSIAAGMVHSTALTE-DGALFYWASSDPDLR---CQQLYSMCGRNVVSISAGKYWTAAV 453
++S+ G HS A+T G + + S+ + C+ + + G + +++ G +T A+
Sbjct: 558 LLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCR-VQGLQGIKISTVACGDAFTVAI 616
Query: 454 TATGDVYMWDGKKSKDNPPLVTRLHGIKKATSVSVGETHLLIVGSL 499
A G+V+ W GK ++ G+ + V + ETH V S+
Sbjct: 617 GAEGEVFSW-GKGARGRLGRKDEDAGLPRP--VQLDETHPYTVTSV 659
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 43/153 (28%), Positives = 69/153 (45%)
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR- 247
+++L+S + H+ +T G +Y WG+ G LG D Q + P+ L R
Sbjct: 180 IVQLLSDYR-HAFILTEEGGIYGWGFNISGELGLGD-RFERSQPTEL-PQNFFPYLLERG 236
Query: 248 -RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK------- 299
R+ + A + V T G V+ WG N G+LG + P +S
Sbjct: 237 DRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDY 296
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
II V ++HT +++ G ++ WG N GQLG+
Sbjct: 297 IIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGF 329
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 49/192 (25%), Positives = 83/192 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVD-----SLH--GFVIKLISAAKFHSVAVTSLGEV 209
V+ WG +LG + + P ++ H ++I+++ + H++A+T LG +
Sbjct: 258 VYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDR-HTLALTQLGYI 316
Query: 210 YTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR--RVKTIAAAKHHTVLATEGGE 267
Y WG G+LG D + A + P GL R R+ + A ++ TE G
Sbjct: 317 YAWGKNSYGQLGFRDQQDRNRPA--LLPWNRFPGLLERNDRIIELIAGGARSLARTEQGF 374
Query: 268 VFTWGSNREGQLGYTSVDTQP---TPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFT 321
++ WG+ G P T L+ + ++ + A HT +E G ++
Sbjct: 375 IYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGYIYA 434
Query: 322 WGCNREGQLGYG 333
WG N GQLG G
Sbjct: 435 WGRNYYGQLGLG 446
Score = 129 (50.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 51/186 (27%), Positives = 84/186 (45%)
Query: 160 WGSGANY--QLGTGNAHLQKLPCKVDSLHGFVIKLIS---AAKFHSVAVTSLGEVYTWGY 214
WG G NY QL GN H P ++ L F+ ++ +F S S G+ +
Sbjct: 90 WGWGNNYTGQLDFGNIHEMTKPARIP-LDSFIPEMAPDDYVVQFASADFLS-GKARSLVA 147
Query: 215 GRGGRLGHPDFD-IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
R G+L ++ I + ++ I R L V+ ++ +H +L EGG ++ WG
Sbjct: 148 TRQGQLHEYYWERISNTRSEFIQHRHYE--LNVTIVQLLSDYRHAFILTEEGG-IYGWGF 204
Query: 274 NREGQLGYTS--VDTQPT--PRRVSSLKL----KIIAVAAANKHTAVVSESGEVFTWGCN 325
N G+LG +QPT P+ L +I+ + A+++ + G V+ WG N
Sbjct: 205 NISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVWGFN 264
Query: 326 REGQLG 331
G+LG
Sbjct: 265 YRGRLG 270
Score = 126 (49.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 45/185 (24%), Positives = 75/185 (40%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSL-------HGFVIKLISAAKFHSVAVTSLGEV 209
++ WG + +LG G+ + P ++ G I ++ A + VA T+ G V
Sbjct: 199 IYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHV 258
Query: 210 YTWGYGRGGRLGHPDFD--IHSGQAAV-ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
Y WG+ GRLG D +H + + P + + HT+ T+ G
Sbjct: 259 YVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDY----IIQVVVGDRHTLALTQLG 314
Query: 267 EVFTWGSNREGQLGYTSVDTQPTP-----RRVSSL---KLKIIAVAAANKHTAVVSESGE 318
++ WG N GQLG+ + P R L +II + A + +E G
Sbjct: 315 YIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGF 374
Query: 319 VFTWG 323
++ WG
Sbjct: 375 IYIWG 379
Score = 63 (27.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWAS------SDPDLRCQQL-----Y----SMCGRNVVS 442
++ + AG S A TE G ++ W + DP+ R + Y G ++V
Sbjct: 356 IIELIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVE 415
Query: 443 ISAGKYWTAAVTATGDVYMW 462
+ AG T A T G +Y W
Sbjct: 416 LIAGPDHTLARTEQGYIYAW 435
Score = 57 (25.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 397 HVVSIAAGMVHSTALTEDGALFYW 420
H+V + AG H+ A TE G ++ W
Sbjct: 412 HLVELIAGPDHTLARTEQGYIYAW 435
Score = 49 (22.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 440 VVSISAGKYWTAAVTATGDVYMWDGKKS 467
++ + G T A+T G +Y W GK S
Sbjct: 297 IIQVVVGDRHTLALTQLGYIYAW-GKNS 323
Score = 49 (22.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 397 HVVSIAAGMVHSTALTEDGALFYWASS 423
+++ + G H+ ALT+ G ++ W +
Sbjct: 296 YIIQVVVGDRHTLALTQLGYIYAWGKN 322
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 440 VVSISAGKYWTAAVTATGDVYMWDGK 465
++ + AG + A T G +Y+W +
Sbjct: 356 IIELIAGGARSLARTEQGFIYIWGAR 381
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 43/153 (28%), Positives = 69/153 (45%)
Query: 189 VIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR- 247
+++L+S + H+ +T G +Y WG+ G LG D Q + P+ L R
Sbjct: 180 IVQLLSDYR-HAFILTEEGGIYGWGFNISGELGLGD-RFERSQPTEL-PQNFFPYLLERG 236
Query: 248 -RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK------- 299
R+ + A + V T G V+ WG N G+LG + P +S
Sbjct: 237 DRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDY 296
Query: 300 IIAVAAANKHTAVVSESGEVFTWGCNREGQLGY 332
II V ++HT +++ G ++ WG N GQLG+
Sbjct: 297 IIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGF 329
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 49/192 (25%), Positives = 83/192 (43%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVD-----SLH--GFVIKLISAAKFHSVAVTSLGEV 209
V+ WG +LG + + P ++ H ++I+++ + H++A+T LG +
Sbjct: 258 VYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDR-HTLALTQLGYI 316
Query: 210 YTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSR--RVKTIAAAKHHTVLATEGGE 267
Y WG G+LG D + A + P GL R R+ + A ++ TE G
Sbjct: 317 YAWGKNSYGQLGFRDQQDRNRPA--LLPWNRFPGLLERNDRIIELIAGGARSLARTEQGF 374
Query: 268 VFTWGSNREGQLGYTSVDTQP---TPRRVSSLKLK---IIAVAAANKHTAVVSESGEVFT 321
++ WG+ G P T L+ + ++ + A HT +E G ++
Sbjct: 375 IYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGYIYA 434
Query: 322 WGCNREGQLGYG 333
WG N GQLG G
Sbjct: 435 WGRNYYGQLGLG 446
Score = 129 (50.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 51/186 (27%), Positives = 84/186 (45%)
Query: 160 WGSGANY--QLGTGNAHLQKLPCKVDSLHGFVIKLIS---AAKFHSVAVTSLGEVYTWGY 214
WG G NY QL GN H P ++ L F+ ++ +F S S G+ +
Sbjct: 90 WGWGNNYTGQLDFGNIHEMTKPARIP-LDSFIPEMAPDDYVVQFASADFLS-GKARSLVA 147
Query: 215 GRGGRLGHPDFD-IHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGS 273
R G+L ++ I + ++ I R L V+ ++ +H +L EGG ++ WG
Sbjct: 148 TRQGQLHEYYWERISNTRSEFIQHRHYE--LNVTIVQLLSDYRHAFILTEEGG-IYGWGF 204
Query: 274 NREGQLGYTS--VDTQPT--PRRVSSLKL----KIIAVAAANKHTAVVSESGEVFTWGCN 325
N G+LG +QPT P+ L +I+ + A+++ + G V+ WG N
Sbjct: 205 NISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVWGFN 264
Query: 326 REGQLG 331
G+LG
Sbjct: 265 YRGRLG 270
Score = 126 (49.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 45/185 (24%), Positives = 75/185 (40%)
Query: 157 VFSWGSGANYQLGTGNAHLQKLPCKVDSL-------HGFVIKLISAAKFHSVAVTSLGEV 209
++ WG + +LG G+ + P ++ G I ++ A + VA T+ G V
Sbjct: 199 IYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHV 258
Query: 210 YTWGYGRGGRLGHPDFD--IHSGQAAV-ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGG 266
Y WG+ GRLG D +H + + P + + HT+ T+ G
Sbjct: 259 YVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDY----IIQVVVGDRHTLALTQLG 314
Query: 267 EVFTWGSNREGQLGYTSVDTQPTP-----RRVSSL---KLKIIAVAAANKHTAVVSESGE 318
++ WG N GQLG+ + P R L +II + A + +E G
Sbjct: 315 YIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGF 374
Query: 319 VFTWG 323
++ WG
Sbjct: 375 IYIWG 379
Score = 63 (27.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 398 VVSIAAGMVHSTALTEDGALFYWAS------SDPDLRCQQL-----Y----SMCGRNVVS 442
++ + AG S A TE G ++ W + DP+ R + Y G ++V
Sbjct: 356 IIELIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVE 415
Query: 443 ISAGKYWTAAVTATGDVYMW 462
+ AG T A T G +Y W
Sbjct: 416 LIAGPDHTLARTEQGYIYAW 435
Score = 57 (25.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 397 HVVSIAAGMVHSTALTEDGALFYW 420
H+V + AG H+ A TE G ++ W
Sbjct: 412 HLVELIAGPDHTLARTEQGYIYAW 435
Score = 49 (22.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 440 VVSISAGKYWTAAVTATGDVYMWDGKKS 467
++ + G T A+T G +Y W GK S
Sbjct: 297 IIQVVVGDRHTLALTQLGYIYAW-GKNS 323
Score = 49 (22.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 397 HVVSIAAGMVHSTALTEDGALFYWASS 423
+++ + G H+ ALT+ G ++ W +
Sbjct: 296 YIIQVVVGDRHTLALTQLGYIYAWGKN 322
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 440 VVSISAGKYWTAAVTATGDVYMWDGK 465
++ + AG + A T G +Y+W +
Sbjct: 356 IIELIAGGARSLARTEQGFIYIWGAR 381
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 160 (61.4 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 66/236 (27%), Positives = 106/236 (44%)
Query: 142 VLQVV-GSGYNSVATE---VFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLISAA 196
V+QVV G ++ T+ VF+ G GA+ Q G G+ ++ +P K+ + G I +S+
Sbjct: 223 VVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIVQVSSY 282
Query: 197 KFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAK 256
+AV+ G+++ WG +L + Q V PR + +G ++K A
Sbjct: 283 GDCCLAVSDEGDLFGWGNSEYLQLASVT---ETTQVNV--PRHLPFKIG--KIKEAACGG 335
Query: 257 HHTVLATEGGEVFTWGSNREGQ---LGYTSVDTQPTPRRVS----SLKLKIIAVAAANKH 309
++ TE G VF WG G+ L T+V P S +++ V H
Sbjct: 336 TGNIVLTEEGAVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSH 395
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTI 365
A ++ GE+F WG N G LG G Y P V ++ G ++V VA H +
Sbjct: 396 FAALTNRGELFVWGKNLRGCLGIGRMED--QYFPWRV-TIPG-EVVDVACGVDHMV 447
Score = 143 (55.4 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 63/250 (25%), Positives = 106/250 (42%)
Query: 193 ISAAKFHSVAVTSLGEVYTWG---YGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRV 249
+S + HS+ +T V+T G YG+ GR D +I+S ++ +I + SR V
Sbjct: 170 VSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVED-EIYS-ESHLI---HQLNDFDSRVV 224
Query: 250 KTIAAAKHHTVLATEGGEVFT--WGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
+ + + H++ T+ G VF WG++ + LG+ ++ + PT + I+ V++
Sbjct: 225 QVVCG-QDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIVQVSSYG 283
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
VS+ G++F WG + QL T + N PR + GK + A IVL
Sbjct: 284 DCCLAVSDEGDLFGWGNSEYLQLASVTETTQVN-VPRHLPFKIGK-IKEAACGGTGNIVL 341
Query: 368 GADGERVIVARNLKKSGST-----------PLKF---HRKIKLHVVSIAAGMVHSTALTE 413
+G + + G P F + V + G+ H ALT
Sbjct: 342 TEEGAVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALTN 401
Query: 414 DGALFYWASS 423
G LF W +
Sbjct: 402 RGELFVWGKN 411
Score = 122 (48.0 bits), Expect = 0.00065, P = 0.00065
Identities = 45/164 (27%), Positives = 71/164 (43%)
Query: 156 EVFSWGSGANYQLGTGNAHLQ-KLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGY 214
++F WG+ QL + Q +P + G IK + ++ +T G V+ WGY
Sbjct: 294 DLFGWGNSEYLQLASVTETTQVNVPRHLPFKIG-KIKEAACGGTGNIVLTEEGAVFVWGY 352
Query: 215 GRGGRLGHPDFDIHSGQAAVITPRRVT-SGLGSR-RVKTIAAAKHHTVLATEGGEVFTWG 272
G G+ G P+ + +I P S S RV + H T GE+F WG
Sbjct: 353 GILGK-G-PNLT-ETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALTNRGELFVWG 409
Query: 273 SNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSES 316
N G LG ++ Q P RV+ + +++ VA H + +S
Sbjct: 410 KNLRGCLGIGRMEDQYFPWRVT-IPGEVVDVACGVDHMVSMVKS 452
>UNIPROTKB|Q96HA7 [details] [associations]
symbol:TONSL "Tonsoku-like protein" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031297
"replication fork processing" evidence=IMP] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042555 "MCM complex" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IDA] [GO:0005662
"DNA replication factor A complex" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=TAS] [GO:0042994
"cytoplasmic sequestering of transcription factor" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR002110 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50005 PROSITE:PS50088 PROSITE:PS50293 PROSITE:PS51450
SMART:SM00028 SMART:SM00248 GO:GO:0005737 GO:GO:0003714
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0043596 Gene3D:1.25.40.10 EMBL:AF205589
GO:GO:0000724 GO:GO:0042393 HSSP:P62775 GO:GO:0031297 GO:GO:0042994
EMBL:AC084125 CTD:4796 HOVERGEN:HBG107999 KO:K09257 OMA:LAPCFQK
OrthoDB:EOG42V8FD EMBL:U16258 EMBL:BC008782 EMBL:AJ249601
IPI:IPI00783999 IPI:IPI00889713 PIR:A56429 RefSeq:NP_038460.4
UniGene:Hs.675285 ProteinModelPortal:Q96HA7 SMR:Q96HA7
IntAct:Q96HA7 STRING:Q96HA7 PhosphoSite:Q96HA7 DMDM:182662416
PaxDb:Q96HA7 PRIDE:Q96HA7 DNASU:4796 Ensembl:ENST00000409379
GeneID:4796 KEGG:hsa:4796 UCSC:uc011llg.2 GeneCards:GC08M145656
H-InvDB:HIX0007858 HGNC:HGNC:7801 HPA:HPA024679 MIM:604546
neXtProt:NX_Q96HA7 PharmGKB:PA31605 HOGENOM:HOG000113022
InParanoid:Q96HA7 GenomeRNAi:4796 NextBio:18484 Bgee:Q96HA7
CleanEx:HS_NFKBIL2 Genevestigator:Q96HA7 Uniprot:Q96HA7
Length = 1378
Score = 155 (59.6 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 50/138 (36%), Positives = 72/138 (52%)
Query: 3 ELLVSHHGQKQTLQSPARKSSLGGVQKDLCLAVREGSLADVESALALLKKNGGNINSRNI 62
E L H G+++ + R++ +G + L A EG L V+ L + G +N R+
Sbjct: 508 EELQGHLGRRKGSKWN-RRNDMG--ETLLHRACIEGQLRRVQD----LVRQGHPLNPRDY 560
Query: 63 FGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGES--GWSSLHRALHFGHLAVASVLLQS 120
G TPLH A + IVR LL GA D G+ G + LH AL+ GH VA +LL+
Sbjct: 561 CGWTPLHEACNYGHLEIVRFLLDHGAAVDDPGGQGCEGITPLHDALNCGHFEVAELLLER 620
Query: 121 GASITLEDCKSRTPVDLL 138
GAS+TL K +P++ L
Sbjct: 621 GASVTLRTRKGLSPLETL 638
Score = 64 (27.6 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 36/159 (22%), Positives = 60/159 (37%)
Query: 886 ALPPPPTPRSEGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGK 945
A P P E ++ A++R + S QS++ P R + P +
Sbjct: 771 AWTPGPASNREAATASTSRAAY-QAAIRGVGSAQSRLGPGPP-RGHSKALAPQAALIPEE 828
Query: 946 VLLSSFMTSKPIPVV-SARAQQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQQGKQHCL 1004
L+ +P+ S R + GD P + SG+ SRP R +Q + C+
Sbjct: 829 ECLAGDWLELDMPLTRSRRPRPRGTGDNRRPS-STSGSDSEESRPRAR---AKQVRLTCM 884
Query: 1005 SHSPKTRTAGFSIAPSQGSPSDSPGMNRWFKPEAETPSS 1043
AG S S+ P SP R +P ++ ++
Sbjct: 885 QSCSAPVNAGPSSLASE--PPGSPSTPRVSEPSGDSSAA 921
>UNIPROTKB|J9P5M3 [details] [associations]
symbol:ZDHHC13 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001594 Pfam:PF01529
PROSITE:PS50088 PROSITE:PS50216 SMART:SM00248 GO:GO:0046872
GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GeneTree:ENSGT00530000063074
EMBL:AAEX03012974 EMBL:AAEX03012973 Ensembl:ENSCAFT00000046324
Uniprot:J9P5M3
Length = 575
Score = 160 (61.4 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 39/103 (37%), Positives = 61/103 (59%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+SS+H A+
Sbjct: 106 AVVDQLGGDLNS------TPLHWAIRQGHLPMVILLLQYGADPTLIDGE-GFSSIHLAVL 158
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGY 150
F H+ + + L+ G S+ + D +TP+ L + VL +G+
Sbjct: 159 FQHMPIIAYLISKGQSVNMTDLNGQTPLMLSAHKVLGPEPTGF 201
>MGI|MGI:105388 [details] [associations]
symbol:Cdkn2c "cyclin-dependent kinase inhibitor 2C (p18,
inhibits CDK4)" species:10090 "Mus musculus" [GO:0000079
"regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=ISO] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=ISO] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006917 "induction of apoptosis" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;IGI] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030308
"negative regulation of cell growth" evidence=ISO] [GO:0042326
"negative regulation of phosphorylation" evidence=ISO]
InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248 MGI:MGI:105388
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0000079
GO:GO:0006917 GO:GO:0030308 GO:GO:0000082 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007050 GO:GO:0048709 GO:GO:0004861
HOGENOM:HOG000290191 HOVERGEN:HBG050870
GeneTree:ENSGT00390000004527 CTD:1031 KO:K06622 OMA:KDQTGFA
OrthoDB:EOG4S4PHS EMBL:U19596 EMBL:BC027026 IPI:IPI00120297
PIR:B57379 RefSeq:NP_031697.1 UniGene:Mm.1912
ProteinModelPortal:Q60772 SMR:Q60772 STRING:Q60772
PhosphoSite:Q60772 PaxDb:Q60772 PRIDE:Q60772
Ensembl:ENSMUST00000063531 Ensembl:ENSMUST00000097921 GeneID:12580
KEGG:mmu:12580 InParanoid:Q60772 NextBio:281708 Bgee:Q60772
Genevestigator:Q60772 GermOnline:ENSMUSG00000028551 Uniprot:Q60772
Length = 168
Score = 136 (52.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 35/96 (36%), Positives = 53/96 (55%)
Query: 42 DVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSS 101
D+E +LL+ N N+N++N FG T L N I RRLL GA+P+ +DG +G++
Sbjct: 17 DLEQLTSLLQNNV-NVNAQNGFGRTALQVMKLGNP-EIARRLLLRGANPNLKDG-TGFAV 73
Query: 102 LHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
+H A G L LL+ A + +ED + P+ L
Sbjct: 74 IHDAARAGFLDTVQALLEFQADVNIEDNEGNLPLHL 109
>UNIPROTKB|F1PMM2 [details] [associations]
symbol:ZDHHC13 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001594 Pfam:PF01529
PROSITE:PS50088 PROSITE:PS50216 SMART:SM00248 GO:GO:0046872
GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GeneTree:ENSGT00530000063074
OMA:RKTPYNL EMBL:AAEX03012974 EMBL:AAEX03012973
Ensembl:ENSCAFT00000014970 Uniprot:F1PMM2
Length = 622
Score = 160 (61.4 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 39/103 (37%), Positives = 61/103 (59%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+SS+H A+
Sbjct: 106 AVVDQLGGDLNS------TPLHWAIRQGHLPMVILLLQYGADPTLIDGE-GFSSIHLAVL 158
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGY 150
F H+ + + L+ G S+ + D +TP+ L + VL +G+
Sbjct: 159 FQHMPIIAYLISKGQSVNMTDLNGQTPLMLSAHKVLGPEPTGF 201
>UNIPROTKB|A7MBB9 [details] [associations]
symbol:CDKN2C "CDKN2C protein" species:9913 "Bos taurus"
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004861
"cyclin-dependent protein serine/threonine kinase inhibitor
activity" evidence=IEA] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0000079
GO:GO:0006917 GO:GO:0030308 GO:GO:0000082 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007050 GO:GO:0004861 HOGENOM:HOG000290191
HOVERGEN:HBG050870 GeneTree:ENSGT00390000004527 CTD:1031 KO:K06622
OMA:KDQTGFA OrthoDB:EOG4S4PHS EMBL:DAAA02008910 EMBL:BC151477
IPI:IPI00695470 RefSeq:NP_001094524.1 UniGene:Bt.55596 SMR:A7MBB9
STRING:A7MBB9 Ensembl:ENSBTAT00000014685 GeneID:505691
KEGG:bta:505691 InParanoid:A7MBB9 NextBio:20867268 Uniprot:A7MBB9
Length = 168
Score = 134 (52.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/96 (36%), Positives = 52/96 (54%)
Query: 42 DVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSS 101
D+E +LL+ N N+N++N FG T L N I RRLL GA+PD +D +G++
Sbjct: 17 DLEQLTSLLQNNV-NVNAQNGFGRTALQVMKLGNP-EIARRLLLRGANPDLKD-RTGFAV 73
Query: 102 LHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
+H A G L LL+ A + +ED + P+ L
Sbjct: 74 IHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHL 109
>UNIPROTKB|P42773 [details] [associations]
symbol:CDKN2C "Cyclin-dependent kinase 4 inhibitor C"
species:9606 "Homo sapiens" [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0004861
"cyclin-dependent protein serine/threonine kinase inhibitor
activity" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IDA] [GO:0042326 "negative regulation of
phosphorylation" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006917 "induction of apoptosis"
evidence=IDA] [GO:0019901 "protein kinase binding" evidence=IPI]
InterPro:IPR002110 Pfam:PF00023 PROSITE:PS50088 SMART:SM00248
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_115566 GO:GO:0008285
GO:GO:0000079 GO:GO:0006917 GO:GO:0030308 GO:GO:0000082
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007050 GO:GO:0048709 GO:GO:0000080
GO:GO:0004861 HOGENOM:HOG000290191 HOVERGEN:HBG050870 PDB:1G3N
PDBsum:1G3N Orphanet:652 EMBL:U17074 EMBL:AF041248 EMBL:AF041250
EMBL:AF041249 EMBL:AY094608 EMBL:BC000598 EMBL:BC005041
EMBL:BC016173 IPI:IPI00001564 PIR:A55479 RefSeq:NP_001253.1
RefSeq:NP_523240.1 UniGene:Hs.525324 PDB:1BU9 PDB:1IHB PDB:1MX2
PDB:1MX4 PDB:1MX6 PDBsum:1BU9 PDBsum:1IHB PDBsum:1MX2 PDBsum:1MX4
PDBsum:1MX6 ProteinModelPortal:P42773 SMR:P42773 IntAct:P42773
MINT:MINT-1372629 STRING:P42773 PhosphoSite:P42773 DMDM:1168870
PaxDb:P42773 PRIDE:P42773 DNASU:1031 Ensembl:ENST00000262662
Ensembl:ENST00000371761 Ensembl:ENST00000396148 GeneID:1031
KEGG:hsa:1031 UCSC:uc001csf.3 CTD:1031 GeneCards:GC01P051427
HGNC:HGNC:1789 HPA:CAB005303 HPA:CAB018398 HPA:HPA019057
HPA:HPA019764 MIM:603369 neXtProt:NX_P42773 PharmGKB:PA26322
InParanoid:P42773 KO:K06622 OMA:KDQTGFA OrthoDB:EOG4S4PHS
PhylomeDB:P42773 EvolutionaryTrace:P42773 GenomeRNAi:1031
NextBio:4337 ArrayExpress:P42773 Bgee:P42773 CleanEx:HS_CDKN2C
Genevestigator:P42773 GermOnline:ENSG00000123080 Uniprot:P42773
Length = 168
Score = 134 (52.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/96 (36%), Positives = 52/96 (54%)
Query: 42 DVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSS 101
D+E +LL+ N N+N++N FG T L N I RRLL GA+PD +D +G++
Sbjct: 17 DLEQLTSLLQNNV-NVNAQNGFGRTALQVMKLGNP-EIARRLLLRGANPDLKD-RTGFAV 73
Query: 102 LHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
+H A G L LL+ A + +ED + P+ L
Sbjct: 74 IHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHL 109
>UNIPROTKB|F1S6F7 [details] [associations]
symbol:CDKN2C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004861 "cyclin-dependent protein serine/threonine kinase
inhibitor activity" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0000079
GO:GO:0006917 GO:GO:0030308 GO:GO:0000082 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007050 GO:GO:0004861 GeneTree:ENSGT00390000004527 KO:K06622
EMBL:FP015924 RefSeq:XP_003128028.1 UniGene:Ssc.26244
Ensembl:ENSSSCT00000004288 GeneID:100515210 KEGG:ssc:100515210
OMA:RGNLPLH Uniprot:F1S6F7
Length = 168
Score = 134 (52.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/96 (36%), Positives = 52/96 (54%)
Query: 42 DVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSS 101
D+E +LL+ N N+N++N FG T L N I RRLL GA+PD +D +G++
Sbjct: 17 DLEQLTSLLQNNV-NVNAQNGFGRTALQVMKLGNP-EIARRLLLRGANPDLKD-RTGFAV 73
Query: 102 LHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
+H A G L LL+ A + +ED + P+ L
Sbjct: 74 IHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHL 109
>UNIPROTKB|Q8IUH4 [details] [associations]
symbol:ZDHHC13 "Palmitoyltransferase ZDHHC13" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=IMP] [GO:0030660 "Golgi-associated vesicle membrane"
evidence=ISS] [GO:0000139 "Golgi membrane" evidence=ISS]
[GO:0016409 "palmitoyltransferase activity" evidence=ISS]
[GO:0015095 "magnesium ion transmembrane transporter activity"
evidence=ISS] [GO:0007165 "signal transduction" evidence=IMP]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR002110 InterPro:IPR001594 Pfam:PF01529 PROSITE:PS50088
PROSITE:PS50216 SMART:SM00248 GO:GO:0016021 GO:GO:0046872
eggNOG:COG0666 GO:GO:0043123 GO:GO:0008270 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0004871 GO:GO:0016409 GO:GO:0030660 GO:GO:0015095
EMBL:AB024495 EMBL:AB097014 EMBL:AB097027 EMBL:AK001714
EMBL:AK001831 EMBL:AC009652 EMBL:BC050690 EMBL:BC036020
EMBL:BC056152 IPI:IPI00410663 IPI:IPI00410664 IPI:IPI00410665
RefSeq:NP_001001483.1 RefSeq:NP_061901.2 UniGene:Hs.188569
ProteinModelPortal:Q8IUH4 SMR:Q8IUH4 STRING:Q8IUH4 TCDB:9.B.37.3.1
PhosphoSite:Q8IUH4 DMDM:269849714 PaxDb:Q8IUH4 PRIDE:Q8IUH4
Ensembl:ENST00000399351 Ensembl:ENST00000446113 GeneID:54503
KEGG:hsa:54503 UCSC:uc001mpi.3 CTD:54503 GeneCards:GC11P019095
HGNC:HGNC:18413 HPA:HPA016759 HPA:HPA018791 MIM:612815
neXtProt:NX_Q8IUH4 PharmGKB:PA134955878 HOGENOM:HOG000290181
HOVERGEN:HBG051907 InParanoid:Q8IUH4 OMA:RKTPYNL GenomeRNAi:54503
NextBio:56857 ArrayExpress:Q8IUH4 Bgee:Q8IUH4 CleanEx:HS_ZDHHC13
Genevestigator:Q8IUH4 GermOnline:ENSG00000177054 Uniprot:Q8IUH4
Length = 622
Score = 158 (60.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/103 (36%), Positives = 61/103 (59%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+SS+H A+
Sbjct: 106 AVVDQLGGDLNS------TPLHWAIRQGHLPMVILLLQHGADPTLIDGE-GFSSIHLAVL 158
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGY 150
F H+ + + L+ G S+ + D +TP+ L + V+ +G+
Sbjct: 159 FQHMPIIAYLISKGQSVNMTDVNGQTPLMLSAHKVIGPEPTGF 201
>UNIPROTKB|Q5NVB9 [details] [associations]
symbol:ZDHHC13 "Palmitoyltransferase ZDHHC13" species:9601
"Pongo abelii" [GO:0000139 "Golgi membrane" evidence=ISS]
[GO:0015095 "magnesium ion transmembrane transporter activity"
evidence=ISS] [GO:0015693 "magnesium ion transport" evidence=ISS]
[GO:0016409 "palmitoyltransferase activity" evidence=ISS]
[GO:0030660 "Golgi-associated vesicle membrane" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001594 Pfam:PF01529 PROSITE:PS50088
PROSITE:PS50216 SMART:SM00248 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016409 GO:GO:0030660
GO:GO:0015095 CTD:54503 HOVERGEN:HBG051907 EMBL:CR926119
RefSeq:NP_001127125.1 UniGene:Pab.274 ProteinModelPortal:Q5NVB9
GeneID:100174171 KEGG:pon:100174171 InParanoid:Q5NVB9
Uniprot:Q5NVB9
Length = 622
Score = 158 (60.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/103 (36%), Positives = 61/103 (59%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+SS+H A+
Sbjct: 106 AVVDQLGGDLNS------TPLHWAIRQGHLPMVILLLQHGADPTLIDGE-GFSSIHLAVL 158
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGY 150
F H+ + + L+ G S+ + D +TP+ L + V+ +G+
Sbjct: 159 FQHMPIIAYLISKGQSVNMTDVNGQTPLMLSAHKVIGPEPTGF 201
>MGI|MGI:1919227 [details] [associations]
symbol:Zdhhc13 "zinc finger, DHHC domain containing 13"
species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=IDA] [GO:0004871 "signal transducer activity"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0008152 "metabolic process" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0015095 "magnesium ion transmembrane
transporter activity" evidence=IDA] [GO:0015693 "magnesium ion
transport" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016409
"palmitoyltransferase activity" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016746 "transferase
activity, transferring acyl groups" evidence=IEA] [GO:0030660
"Golgi-associated vesicle membrane" evidence=IDA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0034220 "ion transmembrane
transport" evidence=IDA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001594
Pfam:PF01529 PROSITE:PS50088 PROSITE:PS50216 SMART:SM00248
MGI:MGI:1919227 GO:GO:0016021 GO:GO:0046872 eggNOG:COG0666
GO:GO:0043123 GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0004871
GeneTree:ENSGT00530000063074 GO:GO:0016409 GO:GO:0030660
GO:GO:0015095 CTD:54503 HOGENOM:HOG000290181 HOVERGEN:HBG051907
OMA:RKTPYNL EMBL:AK010382 EMBL:AK145855 EMBL:AK146196 EMBL:BC046599
IPI:IPI00187236 RefSeq:NP_082307.1 UniGene:Mm.279116
ProteinModelPortal:Q9CWU2 SMR:Q9CWU2 STRING:Q9CWU2
PhosphoSite:Q9CWU2 PaxDb:Q9CWU2 PRIDE:Q9CWU2
Ensembl:ENSMUST00000118927 GeneID:243983 KEGG:mmu:243983
UCSC:uc009haw.1 InParanoid:Q9CWU2 OrthoDB:EOG4WWRJ8 NextBio:386082
Bgee:Q9CWU2 CleanEx:MM_ZDHHC13 Genevestigator:Q9CWU2 Uniprot:Q9CWU2
Length = 622
Score = 158 (60.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/103 (36%), Positives = 61/103 (59%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+SS+H A+
Sbjct: 106 AVIDQLGGDLNS------TPLHWAIRQGHLPMVILLLQHGADPTLIDGE-GFSSIHLAVL 158
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGY 150
F H+ + + L+ G S+ + D +TP+ L + V+ +G+
Sbjct: 159 FQHMPIIAYLISKGQSVNMTDVNGQTPLMLSAYKVIGPEPTGF 201
>UNIPROTKB|E9PU37 [details] [associations]
symbol:Zdhhc13 "Protein Zdhhc13" species:10116 "Rattus
norvegicus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0015095 "magnesium
ion transmembrane transporter activity" evidence=IEA] [GO:0016409
"palmitoyltransferase activity" evidence=IEA] [GO:0030660
"Golgi-associated vesicle membrane" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001594 Pfam:PF01529
PROSITE:PS50088 PROSITE:PS50216 SMART:SM00248 RGD:1309736
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0004871 GeneTree:ENSGT00530000063074 GO:GO:0016409
GO:GO:0030660 GO:GO:0015095 IPI:IPI00360924
Ensembl:ENSRNOT00000019175 Uniprot:E9PU37
Length = 622
Score = 158 (60.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/103 (36%), Positives = 61/103 (59%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+SS+H A+
Sbjct: 106 AVIDQLGGDLNS------TPLHWAIRQGHLPMVILLLQHGADPTLIDGE-GFSSIHLAVL 158
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGY 150
F H+ + + L+ G S+ + D +TP+ L + V+ +G+
Sbjct: 159 FQHMPIIAYLISKGQSVNMTDVNGQTPLMLSAYKVIGPEPTGF 201
>RGD|1309736 [details] [associations]
symbol:Zdhhc13 "zinc finger, DHHC-type containing 13"
species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0008152
"metabolic process" evidence=ISO] [GO:0015095 "magnesium ion
transmembrane transporter activity" evidence=ISO] [GO:0015693
"magnesium ion transport" evidence=ISO] [GO:0016409
"palmitoyltransferase activity" evidence=ISO] [GO:0030660
"Golgi-associated vesicle membrane" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] InterPro:IPR002110 InterPro:IPR001594 Pfam:PF01529
PROSITE:PS50088 PROSITE:PS50216 SMART:SM00248 RGD:1309736
GO:GO:0046872 eggNOG:COG0666 GO:GO:0008270 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
CTD:54503 HOGENOM:HOG000290181 HOVERGEN:HBG051907 OrthoDB:EOG4WWRJ8
IPI:IPI00360924 EMBL:AY886529 RefSeq:NP_001034126.1
UniGene:Rn.137700 ProteinModelPortal:Q2TGJ6 GeneID:365252
KEGG:rno:365252 UCSC:RGD:1309736 InParanoid:Q2TGJ6 NextBio:686984
Genevestigator:Q2TGJ6 Uniprot:Q2TGJ6
Length = 622
Score = 157 (60.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/103 (36%), Positives = 61/103 (59%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+SS+H A+
Sbjct: 106 AVIDQLGGDLNS------TPLHWAIRQGHLPMVILLLQHGADPTLIDGE-GFSSIHLAVL 158
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGY 150
F H+ + + L+ G S+ + D +TP+ L + V+ +G+
Sbjct: 159 FQHMPIIAYLIPKGQSVNMTDVNGQTPLMLSAYKVIGPEPTGF 201
>CGD|CAL0000172 [details] [associations]
symbol:orf19.7574 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 160 (61.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 65/236 (27%), Positives = 112/236 (47%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKV--DS------LHGFV--------IKLISAAK 197
A+E++ +G +N QLG G++ + P + D+ L G + K I+ +K
Sbjct: 179 ASEIYVFGCNSNNQLGVGDSTDRATPALLYHDNFKFATDLTGSISERFKRPRYKRITISK 238
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
HSV VT GE+++ G G GRLGH D+++ +R+ + +K +A + +
Sbjct: 239 NHSVVVTQDGELFSCGVGSRGRLGHGLTDLNN----YFKFKRIEF-FNDKTIKDVAISSN 293
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQP----------TPRRVSS--LKLK-IIAVA 304
H++ T EV+ WG N QLG +++ + TP V K++ II +
Sbjct: 294 HSIALTTDNEVYAWGLNSFNQLGVPNMNNKKSTNYLDKFIATPIMVGGELRKMQNIIGIE 353
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE-SLKGKDLVGVAA 359
+ H+ S++ F WG N GQ+G +N + +V E S++G+ V A
Sbjct: 354 VSKIHSLAWSKNYLCF-WGLN-VGQMGISYTNG--DIEVKVQERSVRGETQVNPKA 405
Score = 153 (58.9 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY--TSVDTQPTPRRVSSLKLKIIA-VA 304
R K I +K+H+V+ T+ GE+F+ G G+LG+ T ++ +R+ K I VA
Sbjct: 230 RYKRITISKNHSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVA 289
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNS--ASNY------TPRVV--ESLKGKDL 354
++ H+ ++ EV+ WG N QLG N+ ++NY TP +V E K +++
Sbjct: 290 ISSNHSIALTTDNEVYAWGLNSFNQLGVPNMNNKKSTNYLDKFIATPIMVGGELRKMQNI 349
Query: 355 VGVAAAKYHTI 365
+G+ +K H++
Sbjct: 350 IGIEVSKIHSL 360
Score = 62 (26.9 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 24/76 (31%), Positives = 34/76 (44%)
Query: 50 LKKNG-GNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDAR------DGESGWSSL 102
LKK ++ R+IFG T LH I N ++ L +PD + D E+GW+ L
Sbjct: 9 LKKLAKDDLFKRDIFGRTILHICILVNNSDALKSLTK---NPDFKTLLKLNDYENGWNCL 65
Query: 103 HRALHFGHLAVASVLL 118
H L VL+
Sbjct: 66 HYIFFHKRLQCLKVLI 81
Score = 41 (19.5 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 439 NVVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIK 481
++ +S + T VT DV+++ + P + + HG K
Sbjct: 411 DIKCVSTSELCTCVVTTLNDVHVYYNYQHFKLPKIPMKGHGDK 453
>UNIPROTKB|Q5ACR8 [details] [associations]
symbol:CaO19.7574 "Potential ankyrin repeat protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 160 (61.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 65/236 (27%), Positives = 112/236 (47%)
Query: 154 ATEVFSWGSGANYQLGTGNAHLQKLPCKV--DS------LHGFV--------IKLISAAK 197
A+E++ +G +N QLG G++ + P + D+ L G + K I+ +K
Sbjct: 179 ASEIYVFGCNSNNQLGVGDSTDRATPALLYHDNFKFATDLTGSISERFKRPRYKRITISK 238
Query: 198 FHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKH 257
HSV VT GE+++ G G GRLGH D+++ +R+ + +K +A + +
Sbjct: 239 NHSVVVTQDGELFSCGVGSRGRLGHGLTDLNN----YFKFKRIEF-FNDKTIKDVAISSN 293
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQP----------TPRRVSS--LKLK-IIAVA 304
H++ T EV+ WG N QLG +++ + TP V K++ II +
Sbjct: 294 HSIALTTDNEVYAWGLNSFNQLGVPNMNNKKSTNYLDKFIATPIMVGGELRKMQNIIGIE 353
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE-SLKGKDLVGVAA 359
+ H+ S++ F WG N GQ+G +N + +V E S++G+ V A
Sbjct: 354 VSKIHSLAWSKNYLCF-WGLN-VGQMGISYTNG--DIEVKVQERSVRGETQVNPKA 405
Score = 153 (58.9 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGY--TSVDTQPTPRRVSSLKLKIIA-VA 304
R K I +K+H+V+ T+ GE+F+ G G+LG+ T ++ +R+ K I VA
Sbjct: 230 RYKRITISKNHSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVA 289
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNS--ASNY------TPRVV--ESLKGKDL 354
++ H+ ++ EV+ WG N QLG N+ ++NY TP +V E K +++
Sbjct: 290 ISSNHSIALTTDNEVYAWGLNSFNQLGVPNMNNKKSTNYLDKFIATPIMVGGELRKMQNI 349
Query: 355 VGVAAAKYHTI 365
+G+ +K H++
Sbjct: 350 IGIEVSKIHSL 360
Score = 62 (26.9 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 24/76 (31%), Positives = 34/76 (44%)
Query: 50 LKKNG-GNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDAR------DGESGWSSL 102
LKK ++ R+IFG T LH I N ++ L +PD + D E+GW+ L
Sbjct: 9 LKKLAKDDLFKRDIFGRTILHICILVNNSDALKSLTK---NPDFKTLLKLNDYENGWNCL 65
Query: 103 HRALHFGHLAVASVLL 118
H L VL+
Sbjct: 66 HYIFFHKRLQCLKVLI 81
Score = 41 (19.5 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 439 NVVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIK 481
++ +S + T VT DV+++ + P + + HG K
Sbjct: 411 DIKCVSTSELCTCVVTTLNDVHVYYNYQHFKLPKIPMKGHGDK 453
>UNIPROTKB|E2RN92 [details] [associations]
symbol:TONSL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042555 "MCM complex" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0035101 "FACT
complex" evidence=IEA] [GO:0031297 "replication fork processing"
evidence=IEA] [GO:0005662 "DNA replication factor A complex"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR019734 Pfam:PF00023 Pfam:PF13176
Pfam:PF13181 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00028
SMART:SM00248 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.25.40.10 GO:GO:0000724
GeneTree:ENSGT00550000074487 GO:GO:0031297 GO:GO:0005662
GO:GO:0042555 GO:GO:0035101 OMA:LAPCFQK EMBL:AAEX03008970
ProteinModelPortal:E2RN92 Ensembl:ENSCAFT00000002544 Uniprot:E2RN92
Length = 1324
Score = 153 (58.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 43/104 (41%), Positives = 55/104 (52%)
Query: 37 EGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGE 96
EG LA V+ L + G +N R+ G TPLH A + IVR LL GA D GE
Sbjct: 536 EGRLARVQD----LVRQGHPLNPRDYCGWTPLHEACNYGHLDIVRFLLDHGAVVDDPGGE 591
Query: 97 S--GWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLL 138
G + LH AL GH VA +L+ GAS+TL K +P++ L
Sbjct: 592 GCEGITPLHDALTCGHFEVAELLIGRGASVTLRTSKGHSPLETL 635
Score = 61 (26.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 42/162 (25%), Positives = 63/162 (38%)
Query: 886 ALPPPPTPRSEGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQF---EDPSFGR- 941
A P P PR PA A+ P GS+S R+ +E + +P ++ ED G
Sbjct: 721 ARPTPKRPRHSVPAQQVARRP-GSSSSRDTAAEVGPRGLGEPDPHRAALIPEEDWLAGDW 779
Query: 942 SEGKVLLSSFMTSKPIPVVSARAQQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQQGKQ 1001
E L+ P+P R Q + G P + S +P RP R Q
Sbjct: 780 LEDDSPLTHSHQDGPVP----RPQGTSRG----APGSGSRSP---GRPRPRARTRQSRLP 828
Query: 1002 HCLSHSPKTRTAGFSIAPSQGSPSDSPGMNRWFKPEAETPSS 1043
H S + G A ++ P SP +R P ++P++
Sbjct: 829 HLTSWNAPIGARGEGGAAAE--PPRSPNTSRASGPGGDSPAA 868
Score = 39 (18.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 884 EIALPPPPTPRSEGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPS 938
EI+ P P P S P GA+ + +L S + + +PT + + P+
Sbjct: 682 EISPPLSPCPGSPEPP--GARPWRNRHTLASSSSSEGEDGPARPTPKRPRHSVPA 734
Score = 37 (18.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 879 DDTPKEIALPPPPTPRSEGPAWG 901
DD+P + P PR +G + G
Sbjct: 782 DDSPLTHSHQDGPVPRPQGTSRG 804
>UNIPROTKB|E2RA22 [details] [associations]
symbol:PSMD10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090201 "negative regulation of release of
cytochrome c from mitochondria" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0045737
"positive regulation of cyclin-dependent protein kinase activity"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0043518 "negative regulation of DNA damage
response, signal transduction by p53 class mediator" evidence=IEA]
[GO:0043409 "negative regulation of MAPK cascade" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007253
"cytoplasmic sequestering of NF-kappaB" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0030307
GO:GO:0015629 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0000122 GO:GO:0043518
GO:GO:0045111 GO:GO:0031398 GO:GO:0032088 GO:GO:0090201
GeneTree:ENSGT00560000077131 GO:GO:0043409 KO:K06694 GO:GO:0045737
GO:GO:0007253 GO:GO:0070682 GO:GO:0008540 CTD:5716 OMA:ATDHFES
EMBL:AAEX03026757 RefSeq:XP_538135.1 ProteinModelPortal:E2RA22
Ensembl:ENSCAFT00000037648 GeneID:481014 KEGG:cfa:481014
NextBio:20855898 Uniprot:E2RA22
Length = 226
Score = 145 (56.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 37/94 (39%), Positives = 53/94 (56%)
Query: 44 ESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLH 103
E ALL K G +N+ N G TPLH A +N+ I LL GA+PDA+D +++H
Sbjct: 87 EIVKALLGK-GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEA-TAMH 144
Query: 104 RALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
RA G+L + +LL AS ++D + TP+ L
Sbjct: 145 RAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHL 178
>UNIPROTKB|O75832 [details] [associations]
symbol:PSMD10 "26S proteasome non-ATPase regulatory subunit
10" species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;TAS]
[GO:0030307 "positive regulation of cell growth" evidence=IDA]
[GO:0070682 "proteasome regulatory particle assembly" evidence=IMP]
[GO:0045737 "positive regulation of cyclin-dependent protein kinase
activity" evidence=IDA] [GO:0090201 "negative regulation of release
of cytochrome c from mitochondria" evidence=IMP] [GO:0043409
"negative regulation of MAPK cascade" evidence=IMP] [GO:0043066
"negative regulation of apoptotic process" evidence=IDA;IMP]
[GO:0007253 "cytoplasmic sequestering of NF-kappaB" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0043518 "negative regulation of DNA damage
response, signal transduction by p53 class mediator" evidence=IDA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0005838 "proteasome regulatory particle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0015629 "actin cytoskeleton" evidence=IDA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0043066
GO:GO:0030307 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0044281 GO:GO:0015629
GO:GO:0000082 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0000122 GO:GO:0043518
GO:GO:0045111 GO:GO:0051436 GO:GO:0032088 GO:GO:0090201
GO:GO:0032436 GO:GO:0000216 GO:GO:0000209 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 HOGENOM:HOG000158359 GO:GO:0043409
EMBL:AL031177 GO:GO:0006521 KO:K06694 Reactome:REACT_383
GO:GO:0045737 GO:GO:0007253 GO:GO:0070682 GO:GO:0005838
EMBL:AB009619 EMBL:D83197 EMBL:AY057056 EMBL:AK295996 EMBL:BT019689
EMBL:BC011960 IPI:IPI00003565 IPI:IPI00183104 RefSeq:NP_002805.1
RefSeq:NP_736606.1 UniGene:Hs.522752 PDB:1QYM PDB:1TR4 PDB:1UOH
PDBsum:1QYM PDBsum:1TR4 PDBsum:1UOH ProteinModelPortal:O75832
SMR:O75832 IntAct:O75832 STRING:O75832 PhosphoSite:O75832
OGP:O75832 PaxDb:O75832 PRIDE:O75832 DNASU:5716
Ensembl:ENST00000217958 Ensembl:ENST00000361815 GeneID:5716
KEGG:hsa:5716 UCSC:uc004enp.2 CTD:5716 GeneCards:GC0XM107327
HGNC:HGNC:9555 HPA:CAB010434 HPA:HPA002920 MIM:300880
neXtProt:NX_O75832 PharmGKB:PA33900 HOVERGEN:HBG053737
InParanoid:O75832 OMA:ATDHFES OrthoDB:EOG45490J PhylomeDB:O75832
EvolutionaryTrace:O75832 GenomeRNAi:5716 NextBio:22206
ArrayExpress:O75832 Bgee:O75832 CleanEx:HS_PSMD10
Genevestigator:O75832 GermOnline:ENSG00000101843 Uniprot:O75832
Length = 226
Score = 145 (56.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 37/94 (39%), Positives = 53/94 (56%)
Query: 44 ESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLH 103
E ALL K G +N+ N G TPLH A +N+ I LL GA+PDA+D +++H
Sbjct: 87 EIVKALLGK-GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEA-TAMH 144
Query: 104 RALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
RA G+L + +LL AS ++D + TP+ L
Sbjct: 145 RAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHL 178
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 156 (60.0 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
R ++ HH+V+ E G+V+T+G + GQLG+ V+++ P V +L V A +
Sbjct: 903 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACS 962
Query: 308 KHTAVVSESGEVFTWGCNREGQLG 331
HTAV+ G+VFT+G +GQLG
Sbjct: 963 NHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 139 (54.0 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 246 SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-SLKLKIIAVA 304
+ R + +A + H + GS G+ + + T P P V +L+ + V+
Sbjct: 850 NHREQALARLRSHPAQLKHKRDKHKDGSGDRGEKDASKITTYP-PGSVRFDCELRAVQVS 908
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
H+ V+ E+G+V+T+G + GQLG+G NS P +V++L G V A HT
Sbjct: 909 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG--CPTLVQALPGPS-TQVTACSNHT 965
Query: 365 IVLGADGE 372
VL DG+
Sbjct: 966 AVLLMDGQ 973
Score = 67 (28.6 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 145 VVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVT 204
VV + N+ ++ V S G Y G +A V L G + ++ K H+ +
Sbjct: 602 VVYTACNNGSSSVIS-KDGELYMFGK-DAIYSDSSSLVSDLKGHFVTQVAMGKAHTCVLM 659
Query: 205 SLGEVYTWGYGRGGRLGHPDFDIHSG 230
GEV+T+G G+ G ++ G
Sbjct: 660 KNGEVWTFGVNNKGQCGRDTGAMNQG 685
Score = 55 (24.4 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 45/179 (25%), Positives = 68/179 (37%)
Query: 896 EGPAWGGAKVPKGSASLREIQSEQSKIKVN-QPTR---------NKD-----QFEDPSFG 940
EG AW A+ G+ LR + EQ + N QP NK Q D G
Sbjct: 2634 EGEAWSLARDRGGNQYLRH-EDEQVLLDQNSQPPPPSPFSVQAFNKGASCSAQGFDYGLG 2692
Query: 941 RSEG---KVLLSSFMTSKPIPVVSARAQQATDGDKSTPPWAASGTPPSLSRP-SLRNIQM 996
++G +L+S + +P S Q A PP + +P +P S + Q+
Sbjct: 2693 NNKGDQLSAILNSIQSRPNLPAPSIFDQAAK------PPSSLVHSPFVFGQPLSFQQRQL 2746
Query: 997 QQGKQHCLSHSPKTRTAGFSIAPSQGSPSDSPGMNRWFKP-EAETPSSIRSIQMEEKAM 1054
Q + + S T+G S PS+ S S P + P + + P + E M
Sbjct: 2747 QSDRGTISTSSRPVSTSGKSELPSKHSRSVKPDGHVSRTPADQKKPRGTEGLSASESLM 2805
Score = 47 (21.6 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 41/173 (23%), Positives = 67/173 (38%)
Query: 888 PPPPTPRSEGPAWGGAKVP-KG-SASLREIQSEQSKIKVNQPTRNKDQFEDPSF----GR 941
PPPP+P S GA +G L + +Q +N +++ PS +
Sbjct: 2665 PPPPSPFSVQAFNKGASCSAQGFDYGLGNNKGDQLSAILNS-IQSRPNLPAPSIFDQAAK 2723
Query: 942 SEGKVLLSSFMTSKPIPVVSARAQQATDGDKSTP--PWAASGTPPSLSRPSLRNIQMQQG 999
++ S F+ +P+ R Q+ G ST P + SG S+ S R+++
Sbjct: 2724 PPSSLVHSPFVFGQPLSF-QQRQLQSDRGTISTSSRPVSTSGKSELPSKHS-RSVKPDGH 2781
Query: 1000 KQHCLSHSPKTR-TAGFSIAPSQGSPSD-----SPGMNRWFKPEAETPSSIRS 1046
+ K R T G S + S SD S +R P T +++S
Sbjct: 2782 VSRTPADQKKPRGTEGLSASESLMLKSDAAKLRSDSHSRSLSPNHNTLQTLKS 2834
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 694 NQEISKQVRALRKKLQQ---IEMLEVKLSNGHILD 725
N ++SK+ +R L E E+KL N H L+
Sbjct: 3092 NPDLSKEHAPIRSSLNSQPPTEEKEIKLKNRHSLE 3126
Score = 43 (20.2 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 535 ESNNMPSAIDKDDSGVRLAPSLKSLCENVAAQC 567
+ MP D D G A L ++C N+ C
Sbjct: 4287 QQKQMPMC-DNHDDGETAAIILCNICGNLCTDC 4318
Score = 42 (19.8 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 49/212 (23%), Positives = 74/212 (34%)
Query: 841 QKKDNADSLKNNCSPQTTSXXXXXXXXGGLSMFLSGALDDTPKEIALPPPPTPR-SEGPA 899
Q + + ++ + P +TS S+ G + TP + PR +EG +
Sbjct: 2745 QLQSDRGTISTSSRPVSTSGKSELPSKHSRSVKPDGHVSRTPAD-----QKKPRGTEGLS 2799
Query: 900 WGGAKVPKGSASLREIQSEQSKIKVNQPTRN--KDQFEDPSFGRSE--GKVLLSSFMTSK 955
+ + K A+ S + N T K S R+E G SS K
Sbjct: 2800 ASESLMLKSDAAKLRSDSHSRSLSPNHNTLQTLKSDGRTSSGFRAESPGPGSRSSSPKPK 2859
Query: 956 PIPVV--------SARAQQATDGD---KSTPPWAASGTPP---SLSRPSLRNIQMQQGKQ 1001
P+P S R+ D + KST P PP S S + + K+
Sbjct: 2860 PLPTPRSSPSGASSPRSSSPQDKNLPQKSTAPAKTKLDPPRERSKSDSYTLDPDTLRKKK 2919
Query: 1002 HCLSHSPKTRTAGFSIAPSQGSPSDSPGM-NR 1032
L+ + R+ P P DSPG NR
Sbjct: 2920 MPLTEPLRGRSTSPKPKPVPKDPKDSPGSENR 2951
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 515 LKLNGRNDLE-EFYEDFMFNDE-SNNMPSAIDK----DDSGVRLAPSLKSLCEN 562
LK NG D + D DE SN + +I K D+ +R +P + C N
Sbjct: 2975 LKTNGVTDSTCDDSGDLKSVDEGSNKVHFSIGKAPLKDEQEMRASPKISRKCAN 3028
>MGI|MGI:1858898 [details] [associations]
symbol:Psmd10 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 10" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007253 "cytoplasmic sequestering of NF-kappaB" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0043409 "negative regulation
of MAPK cascade" evidence=ISO] [GO:0043518 "negative regulation of
DNA damage response, signal transduction by p53 class mediator"
evidence=ISO] [GO:0045737 "positive regulation of cyclin-dependent
protein kinase activity" evidence=ISO] [GO:0070682 "proteasome
regulatory particle assembly" evidence=ISO] [GO:0090201 "negative
regulation of release of cytochrome c from mitochondria"
evidence=ISO] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 MGI:MGI:1858898 GO:GO:0005634
GO:GO:0005737 GO:GO:0006915 GO:GO:0043066 GO:GO:0030307
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0000122 GO:GO:0043518
GO:GO:0031398 GO:GO:0032088 GO:GO:0090201 GO:GO:0032436
GeneTree:ENSGT00560000077131 HOGENOM:HOG000158359 GO:GO:0043409
EMBL:CH466616 GO:GO:0045737 GO:GO:0007253 GO:GO:0070682 PDB:2DVW
PDBsum:2DVW PDB:3AJI PDBsum:3AJI PDB:2DWZ PDBsum:2DWZ CTD:5716
HOVERGEN:HBG053737 OrthoDB:EOG45490J EMBL:AB022022 EMBL:AK009068
EMBL:AK018233 EMBL:AK136400 EMBL:AL672306 EMBL:BC026931
EMBL:BC056196 IPI:IPI00320299 RefSeq:NP_001157649.1
RefSeq:NP_058579.2 UniGene:Mm.17640 ProteinModelPortal:Q9Z2X2
SMR:Q9Z2X2 DIP:DIP-29273N STRING:Q9Z2X2 PhosphoSite:Q9Z2X2
REPRODUCTION-2DPAGE:Q9Z2X2 PaxDb:Q9Z2X2 PRIDE:Q9Z2X2 GeneID:53380
InParanoid:Q9Z2X2 EvolutionaryTrace:Q9Z2X2 Genevestigator:Q9Z2X2
GermOnline:ENSMUSG00000031429 Uniprot:Q9Z2X2
Length = 231
Score = 145 (56.1 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 37/94 (39%), Positives = 54/94 (57%)
Query: 44 ESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLH 103
E ALL K G ++N+ N G TPLH A +N+ I LL GA+PDA+D +++H
Sbjct: 87 EIVKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA-TAMH 144
Query: 104 RALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
RA G+L + +LL AS ++D + TP+ L
Sbjct: 145 RAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHL 178
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 154 (59.3 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 53/174 (30%), Positives = 85/174 (48%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S+ TEV++WG G QLG G+ + P V L G + + A +HS+A+T+ +VY+
Sbjct: 523 SLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYS 582
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G+LGH DF + A +++S G V ++AA + +++ + E F
Sbjct: 583 WGSNTFGQLGHSDFPTTVPRLA-----KISSENG---VWSVAAGRDYSLFLVDT-EDFQP 633
Query: 272 GSNREGQLGYTSVDTQP-------TPRRVSSLKLKIIAVAAANK--HTAVVSES 316
G G+ T D P TP +S KL I+ A K + A+V ++
Sbjct: 634 GLYYSGRQDPTEGDNLPENHSGSKTPVLLSCSKLGYISRVTAGKDSYLALVDKN 687
Score = 151 (58.2 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 51/179 (28%), Positives = 79/179 (44%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT-SGLGSRRVKTIAAAKH 257
H V +T GEVY++G SG + + + L + V T+A
Sbjct: 52 HGVLLTEDGEVYSFG----------TLPWRSGPVEICPSSPILENALVGQYVVTVATGSF 101
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS--------LKLKIIAVAAANKH 309
H+ T+ G + WG N GQ + P P VS L ++I+ +A +H
Sbjct: 102 HSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEH 161
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYT-PRVVESLKGKDLVGVAAAKYHTIVL 367
T +S S E++ WG QLG T+ A T P+ VE L G+ ++ VA +H++ L
Sbjct: 162 TLALSISREIWAWGTGC--QLGLITT--AFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 130 (50.8 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
EV+TWG +EGQLG+ V + P V L K +I + A H+ ++ +V++WG N
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
GQLG+ + PR+ + + VAA + +++ L
Sbjct: 587 TFGQLGHSDFPTT---VPRLAKISSENGVWSVAAGRDYSLFL 625
Score = 124 (48.7 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 58/206 (28%), Positives = 90/206 (43%)
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTA---VVSESGEVFTWGCNREG 328
GS R G S + R+ + +K + + + A + S EV+TWG +EG
Sbjct: 478 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 537
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSGST- 386
QLG+G + P V+ L GK+++ + A YH++ L A + N + G +
Sbjct: 538 QLGHG--DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSD 595
Query: 387 -PLKFHRKIKLH----VVSIAAGMVHSTAL--TED--GALFYWASSDPDLRCQQLYSMCG 437
P R K+ V S+AAG +S L TED L+Y DP + G
Sbjct: 596 FPTTVPRLAKISSENGVWSVAAGRDYSLFLVDTEDFQPGLYYSGRQDPTEGDNLPENHSG 655
Query: 438 -RNVVSISAGKY-WTAAVTATGDVYM 461
+ V +S K + + VTA D Y+
Sbjct: 656 SKTPVLLSCSKLGYISRVTAGKDSYL 681
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 55/206 (26%), Positives = 88/206 (42%)
Query: 227 IHSGQAAV--ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN--REGQLGYT 282
+H QA ITP R+ G G + V A H VL TE GEV+++G+ R G
Sbjct: 20 VHIWQAGSFPITPERLP-GWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGP---- 74
Query: 283 SVDTQPT-PRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASN 340
V+ P+ P ++L + ++ VA + H+ V+++G + WG N GQ
Sbjct: 75 -VEICPSSPILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPE 133
Query: 341 YTPRVVESLKGKDLVGV-----AAAKYHTIVLGADGERVIVARNLKKSGST---PLKFHR 392
P + + L+ V A + HT+ L E + T P+ +
Sbjct: 134 PNPVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPVTKPQ 193
Query: 393 KIKLH-----VVSIAAGMVHSTALTE 413
K++ H V+ +A G HS AL +
Sbjct: 194 KVE-HLAGRVVLQVACGAFHSLALVQ 218
Score = 82 (33.9 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 109 GHLAVASV-LLQSGASITLEDCKSRTPVDLLSGPVLQVV-GSGYN---SVATEVFSWGSG 163
G AVA+ + +++ D ++ +P LL+ +LQ+ G + S++ E+++WG+G
Sbjct: 121 GQCAVANQQYVPEPNPVSIADSEA-SP--LLAVRILQLACGEEHTLALSISREIWAWGTG 177
Query: 164 ANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
L T + K P KV+ L G V+ ++ FHS+A+
Sbjct: 178 CQLGLITTAFPVTK-PQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 73 (30.8 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 25/79 (31%), Positives = 33/79 (41%)
Query: 428 RCQQLYSMC--GRNVVSISAGKYWTAAVTATGDVYMWDGKK-----SKDNPPLVTRLHGI 480
R Q L C G+ V+ + AG Y + A+TA VY W D P V RL I
Sbjct: 547 RLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKI 606
Query: 481 KKAT---SVSVGETHLLIV 496
SV+ G + L +
Sbjct: 607 SSENGVWSVAAGRDYSLFL 625
Score = 39 (18.8 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 16/80 (20%), Positives = 30/80 (37%)
Query: 954 SKPIPVVSARAQQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQQGKQHCLSHSPKTRTA 1013
+K + +S QA G PP+ SG+ P + + ++ P+ + A
Sbjct: 994 TKWLRAISQAVDQALRGMSDLPPYG-SGSSVQRQEPPI-----SRSAKYTFYKDPRLKDA 1047
Query: 1014 GFSIAPSQGSPSDSPGMNRW 1033
+ G P G+ +W
Sbjct: 1048 TYDGRWLSGKPHGR-GVLKW 1066
Score = 38 (18.4 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 965 QQATDGDKSTPPWAASGTPPSLSRPSLRNI-QMQQGKQHCLS 1005
Q T+GD + S TP LS L I ++ GK L+
Sbjct: 641 QDPTEGDNLPENHSGSKTPVLLSCSKLGYISRVTAGKDSYLA 682
Score = 37 (18.1 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 435 MCGRNVVSISAGKYWTAAVTAT---GDVYMWDGKKSKDNPPL 473
MCG+ V S ++G+ + G + GK + +P +
Sbjct: 1109 MCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSSPSM 1150
Score = 37 (18.1 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 477 LHGIKKATSVSVGETHLLIVGSLYHPIYPPNVAKNPQKLKLNGRNDLEEFYEDFMFNDES 536
LHG+K+A S+ + + H SL+ Y L + G L + DF+ N
Sbjct: 760 LHGVKEARSLVILK-H----SSLFLDSYTEYCTSITNFLVMGGFQLLAKPAIDFL-NKNQ 813
Query: 537 NNMPSAIDKDDSGVRLAPSLKSL 559
+ + +D +L L +L
Sbjct: 814 ELLQDLSEVNDENTQLMEILNTL 836
>DICTYBASE|DDB_G0287345 [details] [associations]
symbol:ankrd39 "ankyrin repeat-containing protein 39"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR002110 Pfam:PF00023 PROSITE:PS50088 SMART:SM00248
dictyBase:DDB_G0287345 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GenomeReviews:CM000154_GR EMBL:AAFI02000100 RefSeq:XP_637250.2
HSSP:P09959 ProteinModelPortal:Q54KH3 EnsemblProtists:DDB0266679
GeneID:8626081 KEGG:ddi:DDB_G0287345 OMA:GACASPQ
ProtClustDB:CLSZ2848578 Uniprot:Q54KH3
Length = 174
Score = 130 (50.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 36/106 (33%), Positives = 53/106 (50%)
Query: 34 AVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADP-DA 92
AVR D+ + LL NG NIN + G TPLH + + N + + LL G D
Sbjct: 72 AVRNDKNNDI---VQLLLDNGANINCQTSGGATPLHRSCFCNSINNTKLLLKKGITKVDL 128
Query: 93 RDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLL 138
D + G + LH+A G++ + ++LLQ GA + D P+ LL
Sbjct: 129 IDSD-GMTPLHKAYQQGNMEIVNLLLQFGADPNILDKNKMKPIQLL 173
>UNIPROTKB|F1NLF9 [details] [associations]
symbol:CDKN2C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0004861
"cyclin-dependent protein serine/threonine kinase inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0000079
GO:GO:0006917 GO:GO:0030308 GO:GO:0000082 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007050 GO:GO:0004861 GeneTree:ENSGT00390000004527
EMBL:AADN02012587 IPI:IPI00603171 Ensembl:ENSGALT00000017152
OMA:IDEPDGY Uniprot:F1NLF9
Length = 168
Score = 130 (50.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGAD 89
+L A +G L + + LL+KN N+N++N FG T L N I RRLL +GA+
Sbjct: 9 ELASAAAKGDLVQLTN---LLQKNV-NVNAQNGFGRTALQVMKLGNP-EIARRLLMSGAN 63
Query: 90 PDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
P+ +D +G++ +H G L LL+ A + +ED + P+ L
Sbjct: 64 PNLKDS-TGFAVIHDVARAGFLDTLQTLLEFHADVNIEDAEGNLPLHL 110
>RGD|2325 [details] [associations]
symbol:Cdkn2c "cyclin-dependent kinase inhibitor 2C (p18, inhibits
CDK4)" species:10116 "Rattus norvegicus" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA;ISO] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA;ISO] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=ISO;TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006917 "induction of apoptosis"
evidence=IEA;ISO] [GO:0007050 "cell cycle arrest" evidence=IEA;ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA;ISO] [GO:0030308
"negative regulation of cell growth" evidence=IEA;ISO] [GO:0042326
"negative regulation of phosphorylation" evidence=ISO] [GO:0048709
"oligodendrocyte differentiation" evidence=IEP] InterPro:IPR002110
PROSITE:PS50088 SMART:SM00248 RGD:2325 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0000079 GO:GO:0006917 GO:GO:0030308 GO:GO:0000082
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007050 GO:GO:0016301
GO:GO:0048709 HSSP:P42773 GO:GO:0004861 HOGENOM:HOG000290191
HOVERGEN:HBG050870 GeneTree:ENSGT00390000004527 CTD:1031 KO:K06622
OrthoDB:EOG4S4PHS EMBL:CH474008 OMA:RGNLPLH EMBL:BC088864
EMBL:AF474980 EMBL:AF474981 IPI:IPI00201705 RefSeq:NP_571977.1
UniGene:Rn.63865 SMR:Q8R5G4 STRING:Q8R5G4 Ensembl:ENSRNOT00000012088
GeneID:54238 KEGG:rno:54238 UCSC:RGD:2325 InParanoid:Q8R5G4
NextBio:610688 Genevestigator:Q8R5G4 Uniprot:Q8R5G4
Length = 168
Score = 130 (50.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 34/96 (35%), Positives = 52/96 (54%)
Query: 42 DVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSS 101
D+E +LL+ N N+N++N FG T L N I RRLL GA+P+ +D +G++
Sbjct: 17 DLEQLTSLLQNNV-NVNAQNGFGRTALQVMKLGNP-EIARRLLLRGANPNLKD-RTGFAV 73
Query: 102 LHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
+H A G L LL+ A + +ED + P+ L
Sbjct: 74 IHDAARAGFLDTVQALLEFQADVNIEDNEGNLPLHL 109
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 156 (60.0 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
R ++ HH+V+ E G+V+T+G + GQLG+ V+++ P V +L V A +
Sbjct: 841 RAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 900
Query: 308 KHTAVVSESGEVFTWGCNREGQLG 331
HTA++ G+VFT+G +GQLG
Sbjct: 901 NHTAILLMDGQVFTFGSFSKGQLG 924
Score = 138 (53.6 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 246 SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-SLKLKIIAVA 304
+ R + +A + H + GS G+ + + T P P V +L+ + V+
Sbjct: 788 NHREQALARIRPHPAQLKHKRDKHKDGSGERGEKDASKITTYP-PGAVRFDCELRAVQVS 846
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
H+ ++ E+G+V+T+G + GQLG+G NS P +V++L G V A HT
Sbjct: 847 CGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRG--CPTLVQALPGPS-TQVTAGSNHT 903
Query: 365 IVLGADGE 372
+L DG+
Sbjct: 904 AILLMDGQ 911
Score = 68 (29.0 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 20/86 (23%), Positives = 35/86 (40%)
Query: 145 VVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVT 204
V+ + N+ ++ V S G Y G + D L G + ++ K H+ +
Sbjct: 540 VISTACNNGSSSVIS-KDGELYMFGKDAIYSDSTSLVTD-LKGHFVTQVAMGKAHTCVLM 597
Query: 205 SLGEVYTWGYGRGGRLGHPDFDIHSG 230
GEV+T+G G+ G + G
Sbjct: 598 KNGEVWTFGVNNKGQCGRDTGSMSQG 623
Score = 52 (23.4 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 694 NQEISKQVRALRKKLQQ--IEMLEVKLSNGHILD 725
N E+SK+ +R L Q E E KL N H L+
Sbjct: 2960 NPELSKEHAPIRSSLTQQPAEEKETKLKNRHSLE 2993
Score = 41 (19.5 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 553 APSLKSLCENVAAQCLVEPRNALQLLEISDSLGADDLKKHCEDIA 597
AP SL + A + + +N LEIS +L ++ H DI+
Sbjct: 2968 APIRSSLTQQPAEEKETKLKNR-HSLEISSALNMFNIAPHGPDIS 3011
Score = 40 (19.1 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 535 ESNNMPSAIDKDDSGVRLAPSLKSLCENVAAQC 567
+ MP D D G A L + C N+ C
Sbjct: 4156 QQKQMPMC-DNHDDGETAAIILCNACGNLCTDC 4187
>UNIPROTKB|O14974 [details] [associations]
symbol:PPP1R12A "Protein phosphatase 1 regulatory subunit
12A" species:9606 "Homo sapiens" [GO:0046822 "regulation of
nucleocytoplasmic transport" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IDA] [GO:0019208 "phosphatase regulator activity"
evidence=IMP;IDA] [GO:0071889 "14-3-3 protein binding"
evidence=IDA] [GO:0030155 "regulation of cell adhesion"
evidence=IDA] [GO:0035507 "regulation of
myosin-light-chain-phosphatase activity" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0006470 "protein dephosphorylation" evidence=IMP] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0007067 "mitosis"
evidence=IMP] [GO:0051297 "centrosome organization" evidence=IMP]
[GO:0043292 "contractile fiber" evidence=IDA] [GO:0043086 "negative
regulation of catalytic activity" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0004857 "enzyme inhibitor activity"
evidence=IDA] [GO:0004871 "signal transducer activity"
evidence=NAS] [GO:0007165 "signal transduction" evidence=NAS]
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0005813 GO:GO:0000776 GO:GO:0006470
GO:GO:0007067 GO:GO:0030155 GO:GO:0051297 eggNOG:COG0666
GO:GO:0004857 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0045944 GO:GO:0046822 GO:GO:0004871
GO:GO:0043292 GO:GO:0004721 GO:GO:0071889 GO:GO:0019208 CTD:4659
HOGENOM:HOG000290648 HOVERGEN:HBG052561 KO:K06270 OrthoDB:EOG4R7V9D
GO:GO:0072357 GO:GO:0035507 InterPro:IPR017401 PIRSF:PIRSF038141
EMBL:D87930 EMBL:AY380574 EMBL:AF458589 EMBL:AK302692 EMBL:AC018476
EMBL:AC073569 EMBL:AC074270 EMBL:BC047898 EMBL:BC092481
EMBL:BC111752 EMBL:AB042196 IPI:IPI00183002 IPI:IPI00397728
IPI:IPI00397730 IPI:IPI00413191 IPI:IPI01021487
RefSeq:NP_001137357.1 RefSeq:NP_001137358.1 RefSeq:NP_001231919.1
RefSeq:NP_001231921.1 RefSeq:NP_002471.1 UniGene:Hs.49582 PDB:2KJY
PDBsum:2KJY ProteinModelPortal:O14974 SMR:O14974 DIP:DIP-33186N
IntAct:O14974 MINT:MINT-195983 STRING:O14974 PhosphoSite:O14974
OGP:O14974 PaxDb:O14974 PRIDE:O14974 Ensembl:ENST00000261207
Ensembl:ENST00000437004 Ensembl:ENST00000450142
Ensembl:ENST00000546369 Ensembl:ENST00000550107 GeneID:4659
KEGG:hsa:4659 UCSC:uc001syz.3 UCSC:uc001sza.3 UCSC:uc001szb.3
GeneCards:GC12M080142 H-InvDB:HIX0010848 HGNC:HGNC:7618
HPA:HPA039443 MIM:602021 neXtProt:NX_O14974 PharmGKB:PA33617
InParanoid:O14974 OMA:KDYDGWT ChEMBL:CHEMBL3124 ChiTaRS:PPP1R12A
EvolutionaryTrace:O14974 GenomeRNAi:4659 NextBio:17954
ArrayExpress:O14974 Bgee:O14974 CleanEx:HS_PPP1R12A
Genevestigator:O14974 GermOnline:ENSG00000058272 Uniprot:O14974
Length = 1030
Score = 151 (58.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 10 GQKQTLQSPARKSSLGGVQ-KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPL 68
G + L+ P K V+ D + + S D + L LL + G +IN N+ GLT L
Sbjct: 19 GSETDLEPPVVKRQKTKVKFDDGAVFLAACSSGDTDEVLKLLHR-GADINYANVDGLTAL 77
Query: 69 HSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLED 128
H A + V +V+ L+ GA+ + D E GW LH A G+L +A L+ GA + +
Sbjct: 78 HQACIDDNVDMVKFLVENGANINQPDNE-GWIPLHAAASCGYLDIAEFLIGQGAHVGAVN 136
Query: 129 CKSRTPVDL 137
+ TP+D+
Sbjct: 137 SEGDTPLDI 145
Score = 58 (25.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 40/199 (20%), Positives = 73/199 (36%)
Query: 807 FDTEITEVSKKKEE---DAMSEGNVAIEYSKQSGFLVQKKDNADSLKNNCSPQTTSXXXX 863
F T T++S K+EE ++ + + + + G L + + + K + T
Sbjct: 414 FPTTATKISPKEEERKDESPATWRLGLRKTGSYGALAEITASKEGQKEKDTAGVTRSASS 473
Query: 864 XXXXGGLSMFLSGALDDTPKEIALPPPPTPRSEGPAWG-GAKVPKGSASLREIQSE---- 918
L D +A P PR K + S+SLR S
Sbjct: 474 PRLSSSLDN-KEKEKDSKGTRLAYVAPTIPRRLASTSDIEEKENRDSSSLRTSSSYTRRK 532
Query: 919 -QSKIKVNQPTRNKDQFEDP-SFGRSEGKVLLSSFMTSKPIPVVSARA--QQATDGDKST 974
+ +K N + SFGR + ++ SS ++ P V++ A Q++ ST
Sbjct: 533 WEDDLKKNSSVNEGSTYHKSCSFGRRQDDLISSSVPSTTSTPTVTSAAGLQKSLLSSTST 592
Query: 975 PPWAASGTPPSLSRPSLRN 993
+G+ + ++ S N
Sbjct: 593 TTKITTGSSSAGTQSSTSN 611
>RGD|620013 [details] [associations]
symbol:Ppp1r12a "protein phosphatase 1, regulatory subunit 12A"
species:10116 "Rattus norvegicus" [GO:0000776 "kinetochore"
evidence=ISO;ISS] [GO:0004721 "phosphoprotein phosphatase activity"
evidence=IDA] [GO:0004857 "enzyme inhibitor activity"
evidence=ISO;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO;ISS] [GO:0006470 "protein dephosphorylation"
evidence=ISO;ISS] [GO:0007067 "mitosis" evidence=ISO;ISS]
[GO:0019208 "phosphatase regulator activity" evidence=ISO;ISS]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=ISO;ISS] [GO:0035507
"regulation of myosin-light-chain-phosphatase activity"
evidence=ISO;ISS] [GO:0043086 "negative regulation of catalytic
activity" evidence=ISO;ISS] [GO:0043292 "contractile fiber"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=ISO]
[GO:0051297 "centrosome organization" evidence=ISO;ISS] [GO:0071889
"14-3-3 protein binding" evidence=ISO;ISS] [GO:0072357 "PTW/PP1
phosphatase complex" evidence=ISO;ISS] InterPro:IPR002110
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 RGD:620013
GO:GO:0005813 GO:GO:0000776 GO:GO:0006470 GO:GO:0007067
GO:GO:0030155 GO:GO:0051297 eggNOG:COG0666 GO:GO:0004857
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0045944 GO:GO:0046822 GO:GO:0043292
GO:GO:0004721 GO:GO:0071889 GO:GO:0019208 CTD:4659
HOGENOM:HOG000290648 HOVERGEN:HBG052561 KO:K06270 OrthoDB:EOG4R7V9D
GO:GO:0072357 GO:GO:0035507 InterPro:IPR017401 PIRSF:PIRSF038141
EMBL:S74907 EMBL:U50185 EMBL:AF110176 IPI:IPI00211695
IPI:IPI00400680 IPI:IPI00400681 PIR:S68418 RefSeq:NP_446342.1
UniGene:Rn.162937 ProteinModelPortal:Q10728 SMR:Q10728
IntAct:Q10728 STRING:Q10728 PhosphoSite:Q10728 PRIDE:Q10728
GeneID:116670 KEGG:rno:116670 UCSC:RGD:620013 InParanoid:Q10728
NextBio:619487 ArrayExpress:Q10728 Genevestigator:Q10728
GermOnline:ENSRNOG00000004925 Uniprot:Q10728
Length = 1032
Score = 151 (58.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 10 GQKQTLQSPARKSSLGGVQ-KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPL 68
G + L+ P K V+ D + + S D + L LL + G +IN N+ GLT L
Sbjct: 19 GSETDLEPPVVKRQKTKVKFDDGAVFLAACSSGDTDEVLKLLHR-GADINYANVDGLTAL 77
Query: 69 HSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLED 128
H A + V +V+ L+ GA+ + D E GW LH A G+L +A L+ GA + +
Sbjct: 78 HQACIDDNVDMVKFLVENGANINQPDNE-GWIPLHAAASCGYLDIAEFLIGQGAHVGAVN 136
Query: 129 CKSRTPVDL 137
+ TP+D+
Sbjct: 137 SEGDTPLDI 145
Score = 57 (25.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 42/202 (20%), Positives = 78/202 (38%)
Query: 807 FDTEITEVSKKKEE---DAMSEGNVAIEYSKQSGFLVQKKDNADSLKNNCSPQTTSXXXX 863
F T T++S K+EE ++ + + + + G L + + ++ K + T+
Sbjct: 414 FPTSTTKISPKEEERKDESPASWRLGLRKTGSYGALAEITASKEAQKE----KDTAGVIR 469
Query: 864 XXXXGGLSMFLSGA---LDDTPKEIALPPPPTPRSEGPAWG-GAKVPKGSASLREIQSE- 918
LS L D+ +A P PR G K + S++LR S
Sbjct: 470 SASSPRLSSSLDNKEKEKDNKGTRLAYVAPTIPRRLGSTSDIEEKENRESSNLRTSSSYT 529
Query: 919 ----QSKIKVNQPTRNKDQFEDP-SFGRSEGKVLLSSFMTSKPIPVVSARA--QQATDGD 971
+ +K N + SFGR + ++ S ++ P V++ A Q++
Sbjct: 530 RRKWEDDLKKNSSINEGSTYHRSCSFGRRQDDLISCSVPSTTSTPTVTSAAGLQKSFLSS 589
Query: 972 KSTPPWAASGTPPSLSRPSLRN 993
ST G+ P+ ++ S N
Sbjct: 590 TSTTAKTPPGSSPAGTQSSTSN 611
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 151 (58.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 69/241 (28%), Positives = 109/241 (45%)
Query: 140 GPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLIS 194
G V+QVV G ++ T EV+S G GA+ Q G G+ ++ P K+ L G + ++
Sbjct: 227 GQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVA 286
Query: 195 AAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT-SGLGSRRVKTIA 253
+A+++ G V+ WG +L D S Q V PR + SG+G +VK +A
Sbjct: 287 TYGDCCLALSADGGVFGWGNSEYLQLASVT-D--STQVNV--PRCLPFSGVG--KVKQVA 339
Query: 254 AAKHHTVLATEGGEVFTWGSNREGQ---LGYTSVDTQ--PTPRRVSSL--KLKIIAVAAA 306
+ G VF WG G+ L T++ PT ++ ++++ +
Sbjct: 340 CGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCG 399
Query: 307 NKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIV 366
H A ++ GE+F WG N G LG G Y P V ++ G+ V VA H +
Sbjct: 400 LSHFAALTNKGELFVWGKNIRGCLGIGRLED--QYFPWRV-TMPGEP-VDVACGVDHMVT 455
Query: 367 L 367
L
Sbjct: 456 L 456
Score = 138 (53.6 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 62/265 (23%), Positives = 109/265 (41%)
Query: 178 LPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHP--DFDIHSGQAAVI 235
+P +D + +S + HS+ +T V++ G G+ G + +++S V
Sbjct: 161 VPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKV- 219
Query: 236 TPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFT--WGSNREGQLGYTSVDTQPTPRRV 293
R+ G +V + + H++ T+ GEV++ WG++ + LG+ ++ + P+
Sbjct: 220 --HRMQDFDG--QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGG 275
Query: 294 SSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVE-SLKGK 352
+ ++ VA +S G VF WG + QL T ++ N PR + S GK
Sbjct: 276 DLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVN-VPRCLPFSGVGK 334
Query: 353 DLVGVAAAKYHTIVLGADGERVIVARNLKKSGST-----------PLKF---HRKIKLHV 398
+ VA VL A+G + + G P F ++ V
Sbjct: 335 -VKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQV 393
Query: 399 VSIAAGMVHSTALTEDGALFYWASS 423
I G+ H ALT G LF W +
Sbjct: 394 SQIRCGLSHFAALTNKGELFVWGKN 418
Score = 130 (50.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 58/217 (26%), Positives = 95/217 (43%)
Query: 175 LQKLPCKVDSLHGFVIKLISAAKFHSVAVTS--LGEVY-TWGYG--RGGRLG-HPDF-DI 227
+Q +P +++ H K+ SAA + + S +V WG G + +LG H D
Sbjct: 93 IQPVPYRLELDH----KISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDK 148
Query: 228 HSGQAAVITPRRVTSGLG---SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV 284
G V+ P V L +V ++ + H+++ T+ VF+ G+N GQ G V
Sbjct: 149 TRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVV 208
Query: 285 DTQPTPR-----RVSSLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSAS 339
+ + R+ +++ V H+ +++ GEV++ G +GQ G G N S
Sbjct: 209 EDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS 268
Query: 340 NYTPRVVESLKGKDLVGVAAAKYHT-----IVLGADG 371
TP S G DL GV + T + L ADG
Sbjct: 269 --TP----SKLGGDLAGVTVVQVATYGDCCLALSADG 299
Score = 105 (42.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 273 SNREGQLGYTSV-DTQPTPRRVSS-LKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
S ++ GY V + P P + + K++ V+ H+ V+++ VF+ G N GQ
Sbjct: 144 SRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQC 203
Query: 331 G--------YGTSNSA---SNYTPRVVESLKGKD--LVGVAAAKYHTIVLGADGERVIVA 377
G Y S+ ++ +VV+ + G+D L + ++ GADG+ +
Sbjct: 204 GRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGH 263
Query: 378 RNLKKSGSTPLKFHRKIK-LHVVSIAAGMVHSTALTEDGALFYWASSD-------PDL-- 427
N+ STP K + + VV +A AL+ DG +F W +S+ D
Sbjct: 264 YNIT---STPSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQ 320
Query: 428 ----RCQQLYSMCGRNVVSISAGKYWTAAVTATGDVYMW 462
RC +S G+ V ++ G A + A G V++W
Sbjct: 321 VNVPRCLP-FSGVGK-VKQVACGGTGCAVLNAEGHVFVW 357
Score = 81 (33.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 209 VYTWGYGRGGRLGHPDFDIHS---GQAAVITPRRVTSGLGSR-----RVKTIAAAKHHTV 260
V+ WG+ G LG P F + S G A + PRR + R ++ + A T+
Sbjct: 58 VFVWGFSFSGALGVPSFVVPSSGPGPRAGLRPRRRIQPVPYRLELDHKISSAACGYGFTL 117
Query: 261 LATEGGEVF-TWGS--NREGQLGY 281
L+++ +V WG N++ QLG+
Sbjct: 118 LSSKTKDVTKVWGMGLNKDSQLGF 141
Score = 40 (19.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 440 VVSISAGKYWTAAVTATGDVYMWDGK 465
V I G AA+T G++++W GK
Sbjct: 393 VSQIRCGLSHFAALTNKGELFVW-GK 417
>MGI|MGI:1930842 [details] [associations]
symbol:Ankrd49 "ankyrin repeat domain 49" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] InterPro:IPR002110
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 MGI:MGI:1930842
GO:GO:0045893 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 CTD:54851
GeneTree:ENSGT00390000003919 HOGENOM:HOG000021411
HOVERGEN:HBG054416 OMA:LHSACRW OrthoDB:EOG4PG620 EMBL:AF028722
EMBL:AK132850 EMBL:BC019777 IPI:IPI00123791 RefSeq:NP_062657.2
UniGene:Mm.395005 ProteinModelPortal:Q8VE42 SMR:Q8VE42
PhosphoSite:Q8VE42 PaxDb:Q8VE42 PRIDE:Q8VE42
Ensembl:ENSMUST00000034406 GeneID:56503 KEGG:mmu:56503
UCSC:uc009ofa.1 InParanoid:Q8VE42 NextBio:312798 Bgee:Q8VE42
CleanEx:MM_ANKRD49 Genevestigator:Q8VE42
GermOnline:ENSMUSG00000031931 Uniprot:Q8VE42
Length = 238
Score = 146 (56.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 40/112 (35%), Positives = 57/112 (50%)
Query: 29 KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGA 88
K L A + LA V+ LL + +N+R+ TPLH A + + +VR L+A GA
Sbjct: 75 KLLLWAAEKNRLATVQR---LLSEKAAEVNTRDEDEYTPLHRAAYSGHIDVVRELVAKGA 131
Query: 89 DPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLLSG 140
D A + GW+ LH A + + VAS LLQ A I + TP+ L +G
Sbjct: 132 DVHAVTVD-GWTPLHSACKWNNTKVASFLLQHDADINAQTKGLLTPLHLAAG 182
Score = 37 (18.1 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1030 MNRWFKPEAETPS 1042
MNR+ KPE + S
Sbjct: 195 MNRYIKPELKNNS 207
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 155 (59.6 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 54/174 (31%), Positives = 85/174 (48%)
Query: 152 SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYT 211
S+ TEV++WG G QLG G+ + P V L G + + A +HS+A+T+ +VY+
Sbjct: 523 SLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYS 582
Query: 212 WGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTW 271
WG G+LGH DF + A +++S G V +IAA + +++ + E F
Sbjct: 583 WGSNTFGQLGHSDFPTTVPRLA-----KISSENG---VWSIAAGRDYSLFLVDT-EDFQP 633
Query: 272 GSNREGQLGYTSVDTQP-------TPRRVSSLKLKIIAVAAANK--HTAVVSES 316
G G+ T D P TP +S KL I+ A K + A+V ++
Sbjct: 634 GLYYSGRQDPTEGDNLPENHSGSKTPVLLSCSKLGYISRVTAGKDSYLALVDKN 687
Score = 150 (57.9 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 51/179 (28%), Positives = 79/179 (44%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT-SGLGSRRVKTIAAAKH 257
H V +T GEVY++G SG + + + L + V T+A
Sbjct: 52 HGVLLTEDGEVYSFG----------TLPWRSGPVEICPSSPILENALVGQYVITVATGSF 101
Query: 258 HTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS--------LKLKIIAVAAANKH 309
H+ T+ G + WG N GQ + P P VS L ++I+ +A +H
Sbjct: 102 HSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEH 161
Query: 310 TAVVSESGEVFTWGCNREGQLGYGTSNSASNYT-PRVVESLKGKDLVGVAAAKYHTIVL 367
T +S S E++ WG QLG T+ A T P+ VE L G+ ++ VA +H++ L
Sbjct: 162 TLALSISREIWAWGTGC--QLGLITT--AFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 129 (50.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
EV+TWG +EGQLG+ V + P V L K +I + A H+ ++ +V++WG N
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
GQLG+ + PR+ + + +AA + +++ L
Sbjct: 587 TFGQLGHSDFPTT---VPRLAKISSENGVWSIAAGRDYSLFL 625
Score = 125 (49.1 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 59/206 (28%), Positives = 90/206 (43%)
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTA---VVSESGEVFTWGCNREG 328
GS R G S + R+ + +K + + + A + S EV+TWG +EG
Sbjct: 478 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 537
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSGST- 386
QLG+G + P V+ L GK+++ + A YH++ L A + N + G +
Sbjct: 538 QLGHG--DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSD 595
Query: 387 -PLKFHRKIKLH----VVSIAAGMVHSTAL--TED--GALFYWASSDPDLRCQQLYSMCG 437
P R K+ V SIAAG +S L TED L+Y DP + G
Sbjct: 596 FPTTVPRLAKISSENGVWSIAAGRDYSLFLVDTEDFQPGLYYSGRQDPTEGDNLPENHSG 655
Query: 438 -RNVVSISAGKY-WTAAVTATGDVYM 461
+ V +S K + + VTA D Y+
Sbjct: 656 SKTPVLLSCSKLGYISRVTAGKDSYL 681
Score = 125 (49.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 56/206 (27%), Positives = 88/206 (42%)
Query: 227 IHSGQAAV--ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSN--REGQLGYT 282
+H QA ITP R+ G G + V A H VL TE GEV+++G+ R G
Sbjct: 20 VHIWQAGSFPITPERLP-GWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGP---- 74
Query: 283 SVDTQPT-PRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASN 340
V+ P+ P ++L + +I VA + H+ V+++G + WG N GQ
Sbjct: 75 -VEICPSSPILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPE 133
Query: 341 YTPRVVESLKGKDLVGV-----AAAKYHTIVLGADGERVIVARNLKKSGST---PLKFHR 392
P + + L+ V A + HT+ L E + T P+ +
Sbjct: 134 PNPVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPVTKPQ 193
Query: 393 KIKLH-----VVSIAAGMVHSTALTE 413
K++ H V+ +A G HS AL +
Sbjct: 194 KVE-HLAGRVVLQVACGAFHSLALVQ 218
Score = 82 (33.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 109 GHLAVASV-LLQSGASITLEDCKSRTPVDLLSGPVLQVV-GSGYN---SVATEVFSWGSG 163
G AVA+ + +++ D ++ +P LL+ +LQ+ G + S++ E+++WG+G
Sbjct: 121 GQCAVANQQYVPEPNPVSIADSEA-SP--LLAVRILQLACGEEHTLALSISREIWAWGTG 177
Query: 164 ANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAV 203
L T + K P KV+ L G V+ ++ FHS+A+
Sbjct: 178 CQLGLITTAFPVTK-PQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 72 (30.4 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 24/79 (30%), Positives = 33/79 (41%)
Query: 428 RCQQLYSMC--GRNVVSISAGKYWTAAVTATGDVYMWDGKK-----SKDNPPLVTRLHGI 480
R Q L C G+ V+ + AG Y + A+TA VY W D P V RL I
Sbjct: 547 RLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKI 606
Query: 481 KKAT---SVSVGETHLLIV 496
S++ G + L +
Sbjct: 607 SSENGVWSIAAGRDYSLFL 625
Score = 39 (18.8 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 16/80 (20%), Positives = 30/80 (37%)
Query: 954 SKPIPVVSARAQQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQQGKQHCLSHSPKTRTA 1013
+K + +S QA G PP+ SG+ P + + ++ P+ + A
Sbjct: 994 TKWLRAISQAVDQALRGMSDLPPYG-SGSSVQRQEPPI-----SRSAKYTFYKDPRLKDA 1047
Query: 1014 GFSIAPSQGSPSDSPGMNRW 1033
+ G P G+ +W
Sbjct: 1048 TYDGRWLSGKPHGR-GVLKW 1066
Score = 38 (18.4 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 965 QQATDGDKSTPPWAASGTPPSLSRPSLRNI-QMQQGKQHCLS 1005
Q T+GD + S TP LS L I ++ GK L+
Sbjct: 641 QDPTEGDNLPENHSGSKTPVLLSCSKLGYISRVTAGKDSYLA 682
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 435 MCGRNVVSISAGKYWTAAVTAT---GDVYMWDGKKSKDNPPL 473
MCG+ V S ++G+ + G + GK + +P +
Sbjct: 1109 MCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSSPSM 1150
Score = 37 (18.1 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 477 LHGIKKATSVSVGETHLLIVGSLYHPIYPPNVAKNPQKLKLNGRNDLEEFYEDFMFNDES 536
LHG+K+A S+ + + H SL+ Y L + G L + DF+ N
Sbjct: 760 LHGVKEARSLVILK-H----SSLFLDSYTEYCTSITNFLVMGGFQLLAKPAIDFL-NKNQ 813
Query: 537 NNMPSAIDKDDSGVRLAPSLKSL 559
+ + +D +L L +L
Sbjct: 814 ELLQDLSEVNDENTQLMEILNTL 836
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 158 (60.7 bits), Expect = 5.7e-07, Sum P(5) = 5.7e-07
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
R ++ HH+V+ E G+V+T+G + GQLG+ V+++ +P V +L V A +
Sbjct: 926 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQVTAGS 985
Query: 308 KHTAVVSESGEVFTWGCNREGQLG 331
HTAV+ G+VFT+G +GQLG
Sbjct: 986 NHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 139 (54.0 bits), Expect = 4.2e-05, Sum P(5) = 4.2e-05
Identities = 35/102 (34%), Positives = 55/102 (53%)
Query: 272 GSNREGQLGYTSVDTQPTPRRVS-SLKLKIIAVAAANKHTAVVSESGEVFTWGCNREGQL 330
GS+ G + + T P P V +L+ + V+ H+ V+ E+G+V+T+G + GQL
Sbjct: 899 GSSERGDKDASKITTYP-PGAVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQL 957
Query: 331 GYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGE 372
G+G NS + P +V++L G V A HT VL DG+
Sbjct: 958 GHGDVNSRGS--PTLVQALPGPS-TQVTAGSNHTAVLLMDGQ 996
Score = 82 (33.9 bits), Expect = 5.7e-07, Sum P(5) = 5.7e-07
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 142 VLQVVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSV 201
V +G +S+ T+ G Y G +A C+V L G + ++ K H+
Sbjct: 632 VYTACNNGSSSIVTK-----DGELYMFGK-DAIYSDSTCQVSDLKGHFVTQVAMGKAHTC 685
Query: 202 AVTSLGEVYTWGYGRGGRLG 221
+T GEV+T+G G+ G
Sbjct: 686 VLTKSGEVWTFGVNNKGQCG 705
Score = 49 (22.3 bits), Expect = 5.7e-07, Sum P(5) = 5.7e-07
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 896 EGPAWGGAKVPKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGR 941
EG AW A+ G+ LR ++ EQ+ ++ T F +F R
Sbjct: 2634 EGEAWSLARDRGGNQYLRHVE-EQAVLEHGAQTPPPSPFSVQAFNR 2678
Score = 44 (20.5 bits), Expect = 5.7e-07, Sum P(5) = 5.7e-07
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 1005 SHSPK--TRTAGFSIAPSQGSPSDSPGMNRWFKPEAETPSSIRSIQMEEKAMKD 1056
S SPK T T+G S S SP S ++ P +PS + E++ D
Sbjct: 2795 SSSPKQKTFTSGRSSPSSTSSPRSSSPHDKNL-PAKVSPSKVHLDPPRERSKSD 2847
Score = 40 (19.1 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 535 ESNNMPSAIDKDDSGVRLAPSLKSLCENVAAQC 567
+ MP D D G A L + C N+ C
Sbjct: 4224 QQKQMPMC-DNHDDGETAAIILCNACGNLCTDC 4255
Score = 37 (18.1 bits), Expect = 5.7e-07, Sum P(5) = 5.7e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 408 STALTEDGALFYWASS 423
+T T+DG +F + SS
Sbjct: 1335 ATITTDDGVVFQFKSS 1350
Score = 37 (18.1 bits), Expect = 4.7e-06, Sum P(4) = 4.7e-06
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 814 VSKKKEEDAMSEGNVAIEYSKQSGFLVQKKDNADSLKNNCSPQTT 858
+S + D SE + A E S + F + K + L++ SP+ +
Sbjct: 2918 LSNDEGNDENSELHNAEEGSSKVHFSIGKAPVKEELESRSSPKVS 2962
>UNIPROTKB|Q4R690 [details] [associations]
symbol:ZDHHC13 "Palmitoyltransferase ZDHHC13" species:9541
"Macaca fascicularis" [GO:0000139 "Golgi membrane" evidence=ISS]
[GO:0015095 "magnesium ion transmembrane transporter activity"
evidence=ISS] [GO:0015693 "magnesium ion transport" evidence=ISS]
[GO:0016409 "palmitoyltransferase activity" evidence=ISS]
[GO:0030660 "Golgi-associated vesicle membrane" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001594 Pfam:PF01529 PROSITE:PS50088
PROSITE:PS50216 SMART:SM00248 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016409 GO:GO:0030660
GO:GO:0015095 HOVERGEN:HBG051907 EMBL:AB169298
ProteinModelPortal:Q4R690 Uniprot:Q4R690
Length = 622
Score = 152 (58.6 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 37/103 (35%), Positives = 60/103 (58%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+SS+H A+
Sbjct: 106 AVVDQLGGDLNS------TPLHWAIRQGHLPMVILLLQHGADPTLTDGE-GFSSIHLAVL 158
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGY 150
F H+ + + L+ S+ + D +TP+ L + V+ +G+
Sbjct: 159 FQHMPIIAYLISKRQSVNMTDVNGQTPLMLSAHKVIGPEPTGF 201
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 151 (58.2 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 70/236 (29%), Positives = 110/236 (46%)
Query: 91 DARDGESGWSSLHRALHFGHLA-VASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSG 149
D R+ ES S +L G L+ V+ LL+ A + K+RT V L+ +
Sbjct: 468 DIREEESEGGSRRLSLP-GLLSQVSPRLLRKAARV-----KTRTVV--LTPTYSGEADAL 519
Query: 150 YNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEV 209
S+ TEV++WG G QLG G+ + P V L G + + A +HS+A+T+ +V
Sbjct: 520 LPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQV 579
Query: 210 YTWGYGRGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVF 269
Y+WG G+LGH DF + A +V+S G V ++AA + +++ + E F
Sbjct: 580 YSWGSNTFGQLGHYDFPTTVPRLA-----KVSSENG---VWSVAAGQDYSLFLVDT-EDF 630
Query: 270 TWGSNREGQLGYTSVDTQP-------TPRRVSSLKLKIIAVAAANK--HTAVVSES 316
G G+ D P TP +S KL I+ A K + A+V ++
Sbjct: 631 QPGLYYSGRQDPAEGDNLPENHSGTKTPVLLSCSKLGYISRVTAGKDSYLALVDKN 686
Score = 149 (57.5 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 53/179 (29%), Positives = 80/179 (44%)
Query: 199 HSVAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRR--VTSGLGSRRVKTIAAAK 256
H V +T GEVY++G L P + A I P + + L + V T+A+
Sbjct: 52 HGVLLTEDGEVYSFG-----TL--P----WRSEPAEICPSCPILENALIGQFVVTVASGS 100
Query: 257 HHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSS--------LKLKIIAVAAANK 308
H TE G + WG N GQ + P P VS L ++I+ +A +
Sbjct: 101 FHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGEE 160
Query: 309 HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
HT +S S E++ WG QLG T+ P+ VE L G+ ++ VA +H++ L
Sbjct: 161 HTLALSISREIWAWGTGC--QLGLITTTFPVT-KPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 126 (49.4 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 267 EVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCN 325
EV+TWG +EGQLG+ V + P V L K +I + A H+ ++ +V++WG N
Sbjct: 526 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSN 585
Query: 326 REGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVL 367
GQLG+ + PR+ + + VAA + +++ L
Sbjct: 586 TFGQLGHYDFPTT---VPRLAKVSSENGVWSVAAGQDYSLFL 624
Score = 125 (49.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 55/206 (26%), Positives = 88/206 (42%)
Query: 227 IHSGQAAV--ITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV 284
+H QA +TP R+ G G + V A H VL TE GEV+++G+ L + S
Sbjct: 20 VHVWQAGSYSVTPERLP-GWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWRSE 73
Query: 285 DTQ--PT-PRRVSSLKLK-IIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASN 340
+ P+ P ++L + ++ VA+ + H V+ESG + WG N GQ
Sbjct: 74 PAEICPSCPILENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPE 133
Query: 341 YTPRVVESLKGKDLVGV-----AAAKYHTIVLGADGERVIVARNLKKSGST---PLKFHR 392
P + + L+ V A + HT+ L E + T P+ +
Sbjct: 134 PNPVSISDSETSSLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVTKPQ 193
Query: 393 KIKLH-----VVSIAAGMVHSTALTE 413
K++ H V+ +A G HS AL +
Sbjct: 194 KVE-HLAGRVVLQVACGAFHSLALVQ 218
Score = 120 (47.3 bits), Expect = 5.5e-05, Sum P(4) = 5.5e-05
Identities = 58/206 (28%), Positives = 89/206 (43%)
Query: 272 GSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTA---VVSESGEVFTWGCNREG 328
GS R G S + R+ + +K + + + A + S EV+TWG +EG
Sbjct: 477 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 536
Query: 329 QLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADGERVIVARN-LKKSG--S 385
QLG+G + P V+ L GK+++ + A YH++ L A + N + G
Sbjct: 537 QLGHG--DVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGHYD 594
Query: 386 TPLKFHRKIKLH----VVSIAAGMVHSTAL--TED--GALFYWASSDPDLRCQQLYSMCG 437
P R K+ V S+AAG +S L TED L+Y DP + G
Sbjct: 595 FPTTVPRLAKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQDPAEGDNLPENHSG 654
Query: 438 -RNVVSISAGKY-WTAAVTATGDVYM 461
+ V +S K + + VTA D Y+
Sbjct: 655 TKTPVLLSCSKLGYISRVTAGKDSYL 680
Score = 89 (36.4 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 33/125 (26%), Positives = 64/125 (51%)
Query: 84 LAAGADPDARDGESGWSSLHRALHFGHLAVASV-LLQSGASITLEDCKSRTPVDLLSGPV 142
+A+G+ + ESG + + G AVA+ + +++ D ++ + LL+ +
Sbjct: 96 VASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSS---LLAVRI 152
Query: 143 LQVV-GSGYN---SVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKF 198
LQ+ G + S++ E+++WG+G L T + K P KV+ L G V+ ++ F
Sbjct: 153 LQLACGEEHTLALSISREIWAWGTGCQLGLITTTFPVTK-PQKVEHLAGRVVLQVACGAF 211
Query: 199 HSVAV 203
HS+A+
Sbjct: 212 HSLAL 216
Score = 72 (30.4 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 428 RCQQLYSMC--GRNVVSISAGKYWTAAVTATGDVYMWD----GKKSK-DNPPLVTRLHGI 480
R Q L C G+ V+ + AG Y + A+TA VY W G+ D P V RL +
Sbjct: 546 RLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGHYDFPTTVPRLAKV 605
Query: 481 KKAT---SVSVGETHLLIV 496
SV+ G+ + L +
Sbjct: 606 SSENGVWSVAAGQDYSLFL 624
Score = 50 (22.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/117 (25%), Positives = 50/117 (42%)
Query: 893 PRSEGPAWGGAKV-PKGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGKVLLSSF 951
P G G + + P+G RE Q +Q ++ + + D E+ S G S ++ L
Sbjct: 428 PCEPGTQAGSSSIGPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSR-RLSLPGL 486
Query: 952 MTSKPIPVVSARAQQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQ--QGKQHCLSH 1006
++ ++ A+ T TP + SG +L PSLR +GK+ L H
Sbjct: 487 LSQVSPRLLRKAARVKTRTVVLTPTY--SGEADALL-PSLRTEVWTWGKGKEGQLGH 540
Score = 39 (18.8 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 16/80 (20%), Positives = 30/80 (37%)
Query: 954 SKPIPVVSARAQQATDGDKSTPPWAASGTPPSLSRPSLRNIQMQQGKQHCLSHSPKTRTA 1013
+K + +S QA G PP+ SG+ P + + ++ P+ + A
Sbjct: 993 TKWLRAISQAVDQALRGTADLPPYG-SGSSIQRQEPPI-----SRSAKYTFYKDPRLKDA 1046
Query: 1014 GFSIAPSQGSPSDSPGMNRW 1033
+ G P G+ +W
Sbjct: 1047 TYDGRWLSGKPHGR-GVLKW 1065
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 21/83 (25%), Positives = 34/83 (40%)
Query: 477 LHGIKKATSVSVGETHLLIVGSLYHPIYPPNVAKNPQKLKLNGRNDLEEFYEDFMFNDES 536
LHGIK+A S+ + + H SL+ Y L + G L + DF+ N
Sbjct: 759 LHGIKEARSLVILK-H----ASLFLDSYTEYCTSITNFLVMGGFQLLAKPAIDFL-NKNQ 812
Query: 537 NNMPSAIDKDDSGVRLAPSLKSL 559
+ + +D +L L +L
Sbjct: 813 ELLQDLSEVNDENTQLMEILNTL 835
Score = 37 (18.1 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 435 MCGRNVVSISAGKYWTAAVTAT---GDVYMWDGKKSKDNPPL 473
MCG+ V S ++G+ + G + GK + +P +
Sbjct: 1108 MCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSSPSM 1149
>TAIR|locus:2134786 [details] [associations]
symbol:AT4G19150 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR002110 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 EMBL:CP002687 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 HSSP:P16157
UniGene:At.43375 UniGene:At.48878 EMBL:AK118494 IPI:IPI00533804
RefSeq:NP_193650.2 ProteinModelPortal:Q8GX17 SMR:Q8GX17
PRIDE:Q8GX17 EnsemblPlants:AT4G19150.1 GeneID:827653
KEGG:ath:AT4G19150 TAIR:At4g19150 HOGENOM:HOG000030766
InParanoid:Q8GX17 OMA:HEEQENR PhylomeDB:Q8GX17
ProtClustDB:CLSN2679928 Genevestigator:Q8GX17 Uniprot:Q8GX17
Length = 243
Score = 143 (55.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 40/111 (36%), Positives = 52/111 (46%)
Query: 25 GGVQKDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLL 84
GG DL A R G LA V+S ++ N +NSR+ TPLH A W +V L
Sbjct: 14 GGASADLHSAARSGDLAAVQS---IISSNPLAVNSRDKHSRTPLHLAAWAGHNEVVSYLC 70
Query: 85 AAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPV 135
AD A G+ ++H A GHL V LL +G S+ K TP+
Sbjct: 71 KNKADVGAAAGDD-MGAIHFASQKGHLEVVRTLLSAGGSVKSITRKGLTPL 120
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 156 (60.0 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
R ++ HH+V+ E G+V+T+G + GQLG+ V+++ P V +L V A +
Sbjct: 917 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 976
Query: 308 KHTAVVSESGEVFTWGCNREGQLG 331
HTAV+ G+VFT+G +GQLG
Sbjct: 977 NHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 134 (52.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 246 SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-SLKLKIIAVA 304
+ R + +A + H + S G+ + V T P P V +++ + V+
Sbjct: 864 NHREQALARLRSHPAQLKHKRDKHKDASGERGEKDASKVTTYP-PGSVRFDCEVRAVQVS 922
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
H+ V+ E+G+V+T+G + GQLG+G NS P +V++L G V A HT
Sbjct: 923 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG--CPTLVQALPGPS-TQVTAGSNHT 979
Query: 365 IVLGADGE 372
VL DG+
Sbjct: 980 AVLVMDGQ 987
Score = 67 (28.6 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 145 VVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVT 204
VV + N+ ++ V S G Y G +A V L G + ++ K H+ +
Sbjct: 616 VVCTACNNGSSSVIS-KDGELYMFGK-DAIYSDSSSLVSDLKGHFVTQVAMGKAHTCVLM 673
Query: 205 SLGEVYTWGYGRGGRLGHPDFDIHSG 230
GEV+T+G G+ G ++ G
Sbjct: 674 KNGEVWTFGVNNKGQCGRDTGAMNQG 699
Score = 43 (20.2 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 539 MPSAIDKDDSGVRLAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGA-DDLK 590
+PSA D S L+P L +L A AL +L D+L A DLK
Sbjct: 1127 LPSATDMQSSCCILSPEL-ALPTGSRA-LTTRSHAALHILGCLDTLAAMQDLK 1177
>TAIR|locus:505006600 [details] [associations]
symbol:AT5G12320 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 HSSP:Q00420
EMBL:BT005649 EMBL:AK118824 IPI:IPI00539187 RefSeq:NP_568265.2
UniGene:At.32152 ProteinModelPortal:Q8GWI1 SMR:Q8GWI1 IntAct:Q8GWI1
STRING:Q8GWI1 PRIDE:Q8GWI1 EnsemblPlants:AT5G12320.1 GeneID:831107
KEGG:ath:AT5G12320 TAIR:At5g12320 HOGENOM:HOG000242493
InParanoid:Q8GWI1 OMA:NINEQDS PhylomeDB:Q8GWI1
ProtClustDB:CLSN2690982 Genevestigator:Q8GWI1 Uniprot:Q8GWI1
Length = 144
Score = 127 (49.8 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 30 DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGAD 89
DL A R + D+ + L +G +++SR+ G T LH A + IV L++ G D
Sbjct: 14 DLLEAARYNDIDDLRT----LASDGLSLHSRDSQGRTALHMAAANGHMTIVEYLISEGVD 69
Query: 90 PDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVD-LLSGPVLQVVGS 148
+A + E+ + LH A GH+ V L+ +GAS++L + RTP+D + ++++ +
Sbjct: 70 INALNDENN-APLHWACLNGHVEVVKRLILAGASLSLLNRYERTPMDEAIGAEKMEIIDA 128
Query: 149 GYNSVA 154
+VA
Sbjct: 129 INTTVA 134
>UNIPROTKB|Q5ZHY3 [details] [associations]
symbol:PPP1R16B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002110 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
GO:GO:0005634 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GeneTree:ENSGT00600000084108 HOGENOM:HOG000236276
HOVERGEN:HBG053644 InterPro:IPR017417 PIRSF:PIRSF038159 CTD:26051
OMA:WAQYEKE OrthoDB:EOG4W6NVX EMBL:AADN02019396 EMBL:AADN02019394
EMBL:AADN02019395 EMBL:AJ721001 IPI:IPI00585540
RefSeq:NP_001026022.1 UniGene:Gga.8923 Ensembl:ENSGALT00000005651
GeneID:419170 KEGG:gga:419170 InParanoid:Q5ZHY3 NextBio:20822269
Uniprot:Q5ZHY3
Length = 571
Score = 151 (58.2 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 45/134 (33%), Positives = 65/134 (48%)
Query: 27 VQKDLCLAVREGSLA-DVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLA 85
V + +A+ E SL D+E LLK N + N GLT LH N IV+ LL+
Sbjct: 63 VSFEASVALLEASLRNDLEEVCYLLKSNISP-DLCNEDGLTALHQCCIDNYEEIVKLLLS 121
Query: 86 AGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLLSG-PVLQ 144
GA+ +A+D E W+ LH A GH+ + +L+Q GA + + P DL P L
Sbjct: 122 HGANVNAKDNEL-WTPLHAAATCGHINLVKILIQHGADLLAVNADGNMPYDLCEDEPTLD 180
Query: 145 VVGS--GYNSVATE 156
V+ + Y + E
Sbjct: 181 VIETCMAYQGITQE 194
>UNIPROTKB|F1NW91 [details] [associations]
symbol:ZDHHC13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001594 Pfam:PF01529 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50216 SMART:SM00248 GO:GO:0046872
GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GeneTree:ENSGT00530000063074
EMBL:AADN02040066 IPI:IPI00596418 Ensembl:ENSGALT00000006496
ArrayExpress:F1NW91 Uniprot:F1NW91
Length = 544
Score = 150 (57.9 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+SS+H A+
Sbjct: 103 AVVDQLGGDLNS------TPLHWAIRQGHLPMVILLLKCGADPSLIDGE-GFSSIHLAVL 155
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVG 147
F H+ + + L+ G +I D TP+ +LS +VVG
Sbjct: 156 FQHVPIVAYLISKGQNIDTADFNGLTPL-MLSAQ--KVVG 192
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 149 (57.5 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 71/244 (29%), Positives = 111/244 (45%)
Query: 140 GPVLQVV-GSGYNSVAT---EVFSWGSGANYQLGTGNAHLQKLPCKVDS-LHGFVIKLIS 194
G V+QV G ++ T EV+S G GA+ Q G G+ ++ P K+ L G + ++
Sbjct: 236 GQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAG--VNVVQ 293
Query: 195 AAKFHS--VAVTSLGEVYTWGYGRGGRLGHPDFDIHSGQAAVITPRRVT-SGLGSRRVKT 251
A + +AV++ G ++ WG +L D S Q V PR + SG+G +VK
Sbjct: 294 VATYGDCCLAVSADGSLFGWGNSEYLQLASVT-D--STQVNV--PRCLPFSGVG--QVKQ 346
Query: 252 IAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQ------PTPRRVSSL--KLKIIAV 303
A + G VF WG G+ G V+T PT ++ L ++++ +
Sbjct: 347 AACGGTGCAVLNGEGHVFVWGYGILGK-GPNLVETALPEMIPPTLFGLTELNPEVRVSRI 405
Query: 304 AAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYH 363
H A +++ GE+F WG N G LG G Y P V ++ G+ V VA H
Sbjct: 406 RCGLSHFAALTDRGELFVWGKNIRGCLGIGRLED--QYFPWRV-TMPGEP-VDVACGVDH 461
Query: 364 TIVL 367
+ L
Sbjct: 462 MVTL 465
Score = 140 (54.3 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 63/250 (25%), Positives = 105/250 (42%)
Query: 193 ISAAKFHSVAVTSLGE-VYTWGYGRGGRLGHP--DFDIHSGQAAVITPRRVTSGLGSRRV 249
+S + HS+ +T GE V++ G G+ G + +I+S V R+ G +V
Sbjct: 185 VSCGRAHSLVLTD-GEGVFSMGNNSYGQCGRKVVENEIYSESHKV---HRMQDFDG--QV 238
Query: 250 KTIAAAKHHTVLATEGGEVFT--WGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
+A + H++ T+ GEV++ WG++ + LG+ ++ + PT + ++ VA
Sbjct: 239 VQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNVVQVATYG 298
Query: 308 KHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRV-----VESLKGKDLVGVAAA-- 360
VS G +F WG + QL T ++ N PR V +K G A
Sbjct: 299 DCCLAVSADGSLFGWGNSEYLQLASVTDSTQVN-VPRCLPFSGVGQVKQAACGGTGCAVL 357
Query: 361 --KYHTIVLGAD--GERVIVARNLKKSGSTPLKF---HRKIKLHVVSIAAGMVHSTALTE 413
+ H V G G+ + P F ++ V I G+ H ALT+
Sbjct: 358 NGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTD 417
Query: 414 DGALFYWASS 423
G LF W +
Sbjct: 418 RGELFVWGKN 427
Score = 136 (52.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 212 WGYG--RGGRLG-HPDF-DIHSGQAAVITPRRVTSGLG---SRRVKTIAAAKHHTVLATE 264
WG G + +LG H D G V+ P V L +V ++ + H+++ T+
Sbjct: 138 WGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLHRPQETQVLQVSCGRAHSLVLTD 197
Query: 265 GGEVFTWGSNREGQLGYTSVDTQ-----PTPRRVSSLKLKIIAVAAANKHTAVVSESGEV 319
G VF+ G+N GQ G V+ + R+ +++ VA H+ +++ GEV
Sbjct: 198 GEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQVACGQDHSLFLTDKGEV 257
Query: 320 FTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLGADG 371
++ G +GQ G G N S T ++ L G ++V VA + + ADG
Sbjct: 258 YSCGWGADGQTGLGHYNITSAPT-KLGGDLAGVNVVQVATYGDCCLAVSADG 308
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 440 VVSISAGKYWTAAVTATGDVYMWDGK 465
V I G AA+T G++++W GK
Sbjct: 402 VSRIRCGLSHFAALTDRGELFVW-GK 426
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 154 (59.3 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 297 KLKIIAVAAANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVG 356
++ I VA + HT V++ E+F +G N GQLG+G + N R+VESLKG+D+
Sbjct: 466 RISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMEN--GRLVESLKGRDIQS 523
Query: 357 VAAAKYHTIVLGADGERVI--VARNL-----KKSGSTPLKFHRKIKLHVVSIAAGMVHST 409
V Y +++ G + A+NL K + P+ + ++ ++ I G H
Sbjct: 524 VGVGNYFSVICCDRGTLLTFGTAKNLGLGKDAKDSAKPMLLEQLLRENIKDIYCGHDHVV 583
Query: 410 ALTEDGALFYWASS 423
A+ E G W S+
Sbjct: 584 AVLESGECLGWGSN 597
Score = 149 (57.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 79/351 (22%), Positives = 139/351 (39%)
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPDFD-IHSGQAAVITPRRVTSGLGSRR 248
IK ++ +K H++ +T+ E++ +G G+LG F + +G R+ L R
Sbjct: 469 IKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENG--------RLVESLKGRD 520
Query: 249 VKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANK 308
++++ + +V+ + G + T+G+ + LG + D+ L+ I + +
Sbjct: 521 IQSVGVGNYFSVICCDRGTLLTFGTAKNLGLGKDAKDSAKPMLLEQLLRENIKDIYCGHD 580
Query: 309 HTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHTIVLG 368
H V ESGE WG N+ GQLG T + P V L A A Y +
Sbjct: 581 HVVAVLESGECLGWGSNQYGQLGLPTLEHF--FAPTKVFFLNE------ATALYGPFQIP 632
Query: 369 ADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIAAGMVHSTALTEDGALFYWASSDPDLR 428
+ IV K + L + +++ + + LT+ F P+
Sbjct: 633 MPSNKKIVYGKAGKDATMLLSDDGSL----IAMGSNKHNKLNLTQRVGFFTKEKKTPNDY 688
Query: 429 CQQLYSMCG--RNVVSISAGKYWTAAVTATGDVYMWDGKKSKDNPPLVTRLHGIKKATSV 486
+ + G VV S G Y + + +G V ++ G+ DN L L +K
Sbjct: 689 VNKPTILQGFPERVVDFSVGSYHSGVILESGQVMIF-GRN--DNTEL--GLGNSQKMAVR 743
Query: 487 SVGETHLLIVGSLYHPIYPPN---VAKNPQKLKLNGRNDLEEFYEDFMFND 534
V L+ + H + V+ Q+L GR DL + ED +D
Sbjct: 744 CVKPVKSLLHHACTHVLCGDGFTLVSTTEQELYFWGRKDLTD--EDVCIDD 792
Score = 51 (23.0 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 907 KGSASLREIQSEQSKIKVNQPT--RNKDQFEDPSFGRSEGKVLLSSFMTSKPIPVVSAR 963
K ++ LREI+ +SKIK T +++Q D E + S S+P P R
Sbjct: 919 KQNSLLREIEDLKSKIKEQDTTFEGHRNQMSDLESKLQELQAKQSFLRKSEPPPAYDRR 977
>RGD|1589460 [details] [associations]
symbol:Ppp1r16b "protein phosphatase 1, regulatory subunit 16B"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=ISO]
InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248 RGD:1589460
GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GeneTree:ENSGT00600000084108
InterPro:IPR017417 PIRSF:PIRSF038159 CTD:26051 OrthoDB:EOG4W6NVX
IPI:IPI00357970 RefSeq:NP_001178001.1 UniGene:Rn.155635
ProteinModelPortal:D4AA72 PRIDE:D4AA72 Ensembl:ENSRNOT00000021133
GeneID:680616 KEGG:rno:680616 UCSC:RGD:1589460 NextBio:719113
ArrayExpress:D4AA72 Uniprot:D4AA72
Length = 568
Score = 150 (57.9 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 46/144 (31%), Positives = 69/144 (47%)
Query: 20 RKSSLGGVQK----DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRN 75
RK S GG +K + +A+ E SL + + KN + + N GLT LH N
Sbjct: 53 RKRSTGGRRKKVSFEASVALLEASLRNDAEEVRYFLKNKVSPDLCNEDGLTALHQCCIDN 112
Query: 76 QVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPV 135
IV+ LL+ GA+ +A+D E W+ LH A GH+ + +L+Q GA + + P
Sbjct: 113 FEEIVKLLLSHGANVNAKDNEL-WTPLHAAATCGHINLVKILVQYGADLLAVNSDGNMPY 171
Query: 136 DLLSG-PVLQVVGS--GYNSVATE 156
DL P L V+ + Y + E
Sbjct: 172 DLCEDEPTLDVIETCMAYQGITQE 195
>UNIPROTKB|E1BYG6 [details] [associations]
symbol:ZDHHC13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0015095
"magnesium ion transmembrane transporter activity" evidence=IEA]
[GO:0016409 "palmitoyltransferase activity" evidence=IEA]
[GO:0030660 "Golgi-associated vesicle membrane" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR002110 InterPro:IPR001594
Pfam:PF01529 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50216
SMART:SM00248 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0004871 GeneTree:ENSGT00530000063074
GO:GO:0016409 GO:GO:0030660 GO:GO:0015095 OMA:RKTPYNL
EMBL:AADN02040066 IPI:IPI00572611 ProteinModelPortal:E1BYG6
Ensembl:ENSGALT00000006498 ArrayExpress:E1BYG6 Uniprot:E1BYG6
Length = 596
Score = 150 (57.9 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+SS+H A+
Sbjct: 84 AVVDQLGGDLNS------TPLHWAIRQGHLPMVILLLKCGADPSLIDGE-GFSSIHLAVL 136
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVG 147
F H+ + + L+ G +I D TP+ +LS +VVG
Sbjct: 137 FQHVPIVAYLISKGQNIDTADFNGLTPL-MLSAQ--KVVG 173
>RGD|1310118 [details] [associations]
symbol:Ankrd12 "ankyrin repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 RGD:1310118 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
IPI:IPI00391760 ProteinModelPortal:D3ZGR5
Ensembl:ENSRNOT00000017253 UCSC:RGD:1310118 ArrayExpress:D3ZGR5
Uniprot:D3ZGR5
Length = 345
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 57 INSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASV 116
IN RN G TPLH A R V V+ L++ GAD + +D +GW+ LH A + G+ VA +
Sbjct: 178 INKRNERGETPLHMAAIRGDVKQVKELISLGADVNVKDF-AGWTPLHEACNVGYYDVAKI 236
Query: 117 LLQSGASITLEDCKSRTPV 135
L+ +GA + + TP+
Sbjct: 237 LIAAGADVNTQGLDDDTPL 255
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 156 (60.0 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAAN 307
R ++ HH+V+ E G+V+T+G + GQLG+ V+++ P V +L V A +
Sbjct: 903 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 962
Query: 308 KHTAVVSESGEVFTWGCNREGQLG 331
HTAV+ G+VFT+G +GQLG
Sbjct: 963 NHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 134 (52.2 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 246 SRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVS-SLKLKIIAVA 304
+ R + +A + H + S G+ + V T P P V +++ + V+
Sbjct: 850 NHREQALARLRSHPAQLKHKRDKHKDASGERGEKDASKVTTYP-PGSVRFDCEVRAVQVS 908
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
H+ V+ E+G+V+T+G + GQLG+G NS P +V++L G V A HT
Sbjct: 909 CGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRG--CPTLVQALPGPS-TQVTAGSNHT 965
Query: 365 IVLGADGE 372
VL DG+
Sbjct: 966 AVLVMDGQ 973
Score = 67 (28.6 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 145 VVGSGYNSVATEVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVT 204
VV + N+ ++ V S G Y G +A V L G + ++ K H+ +
Sbjct: 602 VVCTACNNGSSSVIS-KDGELYMFGK-DAIYSDSSSLVSDLKGHFVTQVAMGKAHTCVLM 659
Query: 205 SLGEVYTWGYGRGGRLGHPDFDIHSG 230
GEV+T+G G+ G ++ G
Sbjct: 660 KNGEVWTFGVNNKGQCGRDTGAMNQG 685
Score = 49 (22.3 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 694 NQEISKQVRALRKKLQQ---IEMLEVKLSNGHILD 725
N E+SK+ +R L E E+KL N H L+
Sbjct: 3095 NPELSKEHAPIRSSLNSQPPTEEKEIKLKNRHSLE 3129
Score = 49 (22.3 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 515 LKLNGRNDLE-EFYEDFMFNDE-SNNMPSAIDK----DDSGVRLAPSLKSLCEN 562
LK NG D + DF DE SN + +I K D+ +R +P + C N
Sbjct: 2978 LKTNGVTDSTCDDSNDFKSVDEGSNKVHFSIGKAPLKDEQEMRASPKISRKCAN 3031
Score = 43 (20.2 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 535 ESNNMPSAIDKDDSGVRLAPSLKSLCENVAAQC 567
+ MP D D G A L ++C N+ C
Sbjct: 4291 QQKQMPMC-DNHDDGETAAIILCNICGNLCTDC 4322
Score = 43 (20.2 bits), Expect = 2.5e-05, Sum P(5) = 2.5e-05
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 539 MPSAIDKDDSGVRLAPSLKSLCENVAAQCLVEPRNALQLLEISDSLGA-DDLK 590
+PSA D S L+P L +L A AL +L D+L A DLK
Sbjct: 1121 LPSATDMQSSCCILSPEL-ALPTGSRA-LTTRSHAALHILGCLDTLAAMQDLK 1171
Score = 38 (18.4 bits), Expect = 2.5e-05, Sum P(5) = 2.5e-05
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 668 NHTKKSTLKNEGDNRLDSFFEPKA 691
NH TLK++G R+ S F ++
Sbjct: 2828 NHNTLQTLKSDG--RVSSSFRAES 2849
>RGD|1311759 [details] [associations]
symbol:Ankrd49 "ankyrin repeat domain 49" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA;ISO]
InterPro:IPR002110 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
RGD:1311759 GO:GO:0045893 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
CTD:54851 GeneTree:ENSGT00390000003919 HOGENOM:HOG000021411
HOVERGEN:HBG054416 OMA:LHSACRW OrthoDB:EOG4PG620 EMBL:BC161982
IPI:IPI00362286 RefSeq:NP_001119755.1 UniGene:Rn.15268
Ensembl:ENSRNOT00000012583 GeneID:315434 KEGG:rno:315434
UCSC:RGD:1311759 NextBio:669240 Genevestigator:B1WC29
Uniprot:B1WC29
Length = 239
Score = 143 (55.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 40/112 (35%), Positives = 57/112 (50%)
Query: 29 KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGA 88
K L A + LA V+ LL + +N+R+ TPLH A + + +VR L+A GA
Sbjct: 76 KLLLWAAEKNRLATVQR---LLSEKAAEVNTRDEDEYTPLHRAAYSGHLDVVRELVAQGA 132
Query: 89 DPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLLSG 140
D A + GW+ LH A + + VAS LLQ A I + TP+ L +G
Sbjct: 133 DVHAVTID-GWTPLHSACKWNNTRVASFLLQHDADINAQTKGLLTPLHLAAG 183
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1030 MNRWFKPEAETPS 1042
MNR+ KPE + S
Sbjct: 196 MNRYIKPELKNNS 208
>MGI|MGI:2151841 [details] [associations]
symbol:Ppp1r16b "protein phosphatase 1, regulatory
(inhibitor) subunit 16B" species:10090 "Mus musculus" [GO:0005634
"nucleus" evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002110
PROSITE:PS50088 SMART:SM00248 MGI:MGI:2151841 GO:GO:0005886
GO:GO:0005634 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0051489
GeneTree:ENSGT00600000084108 HOGENOM:HOG000236276
HOVERGEN:HBG053644 InterPro:IPR017417 PIRSF:PIRSF038159 CTD:26051
OMA:WAQYEKE OrthoDB:EOG4W6NVX EMBL:AF423761 EMBL:BC054764
EMBL:BC057542 IPI:IPI00319920 RefSeq:NP_001153134.1
RefSeq:NP_694729.1 UniGene:Mm.150540 UniGene:Mm.485085
ProteinModelPortal:Q8VHQ3 SMR:Q8VHQ3 STRING:Q8VHQ3
PhosphoSite:Q8VHQ3 PRIDE:Q8VHQ3 Ensembl:ENSMUST00000045503
Ensembl:ENSMUST00000052927 Ensembl:ENSMUST00000103116 GeneID:228852
KEGG:mmu:228852 InParanoid:Q8VHQ3 NextBio:379206 Bgee:Q8VHQ3
Genevestigator:Q8VHQ3 GermOnline:ENSMUSG00000037754 Uniprot:Q8VHQ3
Length = 568
Score = 150 (57.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 46/144 (31%), Positives = 69/144 (47%)
Query: 20 RKSSLGGVQK----DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRN 75
RK S GG +K + +A+ E SL + + KN + + N GLT LH N
Sbjct: 53 RKRSTGGRRKKVSFEASVALLEASLRNDAEEVRYFLKNKVSPDLCNEDGLTALHQCCIDN 112
Query: 76 QVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPV 135
IV+ LL+ GA+ +A+D E W+ LH A GH+ + +L+Q GA + + P
Sbjct: 113 FEEIVKLLLSHGANVNAKDNEL-WTPLHAAATCGHINLVKILVQYGADLLAVNSDGNMPY 171
Query: 136 DLLSG-PVLQVVGS--GYNSVATE 156
DL P L V+ + Y + E
Sbjct: 172 DLCEDEPTLDVIETCMAYQGITQE 195
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 975 PPWAASGTPPSLSRPSLRNIQMQQGKQHCLSHSPKTRTAGFSIAPSQGSPSD 1026
PPW SG S +L ++ Q+ LSH + G S+A S S S+
Sbjct: 468 PPW--SGFKEQ-SPQTLLELKRQRAAAKLLSHPFLSTHLGSSVARSGESSSE 516
>WB|WBGene00003196 [details] [associations]
symbol:mel-11 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005913 "cell-cell adherens junction"
evidence=IDA] [GO:0048598 "embryonic morphogenesis" evidence=IGI]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248 GO:GO:0009792
GO:GO:0006898 GO:GO:0005737 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0000003
GO:GO:0005913 HSSP:P09959 GO:GO:0010172 EMBL:Z47809
GeneTree:ENSGT00600000084108 EMBL:Z36719 RefSeq:NP_001021928.1
UniGene:Cel.17295 ProteinModelPortal:G5ECD7 SMR:G5ECD7
IntAct:G5ECD7 PRIDE:G5ECD7 EnsemblMetazoa:C06C3.1c GeneID:174484
KEGG:cel:CELE_C06C3.1 CTD:174484 WormBase:C06C3.1c OMA:DQHSENE
NextBio:884232 Uniprot:G5ECD7
Length = 1124
Score = 151 (58.2 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 41/120 (34%), Positives = 64/120 (53%)
Query: 19 ARKSSLGGVQ-KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQV 77
AR++ VQ +D + + D E LL K G NIN+ + GLT LH ++ ++
Sbjct: 43 ARRTKRPKVQFQDSDIFLSACMSGDEEEVEELLNK-GANINTCTVDGLTALHQSVIDSKP 101
Query: 78 PIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
+VR L GAD +A+D E GW+ LH A G++A+ L Q GA +++ + +DL
Sbjct: 102 EMVRFLCEKGADVNAQDNE-GWTPLHAAACCGNVAIVRYLCQHGADLSIVNSDKELALDL 160
Score = 59 (25.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 32/120 (26%), Positives = 47/120 (39%)
Query: 885 IALPPPPTPRSEGPA-WGGAKVPKGSASLREIQSEQSKIKVNQ----PTRNKDQFEDPSF 939
+ L PP + P+ W VP S S + S V++ P+ Q PS
Sbjct: 543 VPLSAPPKAVHQSPSSWINRGVPLSSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSV 602
Query: 940 GRSEGKVLL----SSFMTSKPIPVVSARAQQATDGDKSTPPWAASGTP--PSLSRPSLRN 993
+ SS + S P+ V A +T K+TP A S T + S+PS R+
Sbjct: 603 SNTTTTTATVAPTSSTVPSTPVSNVMAATISSTA--KNTPSPAGSVTTINATFSKPSSRH 660
Score = 50 (22.7 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 32/143 (22%), Positives = 51/143 (35%)
Query: 907 KGSASLREIQSEQSKIKVNQPTRNKDQFEDPSFGRSEGKVLLSSFMTSKPIPVVSARAQQ 966
K + ++SE + + TR+ D + D S E +S +S S+ + +
Sbjct: 440 KNGKEISPLRSETTSSRSISITRSLDGYTDRSSSGRETSAEMSEAASSASTGTTSS-SSR 498
Query: 967 ATDGDKSTPPWAASGTPPSLSRPSLRNIQ-MQQGKQHCLSHSPKTRTAGFSIAPSQGSPS 1025
T S+ AA R S+ N + G Q+ + P S P S
Sbjct: 499 FTSSTPSSQRSAAGSVHTETPRSSMENSSSVGSGDQNVSATIP---IVPLSAPPKAVHQS 555
Query: 1026 DSPGMNRW--FKPEAETPSSIRS 1046
S +NR + T S RS
Sbjct: 556 PSSWINRGVPLSSRSSTSSVTRS 578
Score = 41 (19.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 28/172 (16%), Positives = 67/172 (38%)
Query: 577 LLEISDSLGADDLKKHCEDIAIRNLDYILTVSSHSFASASLDILADLEKSLDLRSSESWS 636
L+E++D++ + K+ + IL +H S +L E+ DL+ + S
Sbjct: 295 LVELADTVKVQN-KRKSPGSGSQPPTSILQEKNHRMPSHEEHVLTS-ERKRDLQHKDQHS 352
Query: 637 YRRL----PTPTATFPXXXXXXXXXXXXXXLRTRD-NHTKKSTLKNEGDNRLDSFFEPKA 691
P+ + + D + +K + ++ ++ +D
Sbjct: 353 ENEFLHSHPSTASVGSTTSSNTNTTTTTIVIGENDISAAQKDSRESSKESAVDDEEYVAE 412
Query: 692 DANQEISKQVRALRKKLQQIEMLEVKLSNGHILDEQQIAKLQTKSVLERSLA 743
D +E + + ++ E E +L NG ++I+ L++++ RS++
Sbjct: 413 DEMEEAEEDEEEEDVEEEEEEKSEAELKNG-----KEISPLRSETTSSRSIS 459
>RGD|1311691 [details] [associations]
symbol:Ripk4 "receptor-interacting serine-threonine kinase 4"
species:10116 "Rattus norvegicus" [GO:0002009 "morphogenesis of an
epithelium" evidence=IEA;ISO] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] InterPro:IPR002110 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PRINTS:PR01415 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50088 SMART:SM00248 RGD:1311691
GO:GO:0005524 GO:GO:0005634 GO:GO:0002009 GO:GO:0005737
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GeneTree:ENSGT00550000074536 OMA:DLRFRII OrthoDB:EOG4XD3QJ
IPI:IPI00191644 ProteinModelPortal:D4AAK5
Ensembl:ENSRNOT00000002206 UCSC:RGD:1311691 Uniprot:D4AAK5
Length = 786
Score = 150 (57.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/120 (32%), Positives = 58/120 (48%)
Query: 19 ARKSSLGGVQKDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVP 78
ARK+S+ +D A+ + E++ LL + ++N + G TP+H A Q
Sbjct: 494 ARKTSVNAKDEDQWTALHFAAQNGDEASTRLLLEKNASVNEVDFEGRTPMHVACQHGQEN 553
Query: 79 IVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLL-QSGASITLEDCKSRTPVDL 137
IVR LL G D + G+ W LH A GHL + +L Q G S+ + RTP+ L
Sbjct: 554 IVRTLLRRGVDVGLQ-GKDAWLPLHYAAWQGHLPIVKLLAKQPGVSVNAQTLDGRTPLHL 612
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 40/105 (38%), Positives = 51/105 (48%)
Query: 31 LCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADP 90
L LAV G E + L N N N N G TPLH A+ R IV LLA
Sbjct: 444 LHLAVEAGQ----EECVKWLLLNNANPNLTNKKGSTPLHMAVERRGRGIVELLLARKTSV 499
Query: 91 DARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPV 135
+A+D E W++LH A G A +LL+ AS+ D + RTP+
Sbjct: 500 NAKD-EDQWTALHFAAQNGDEASTRLLLEKNASVNEVDFEGRTPM 543
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 148 (57.2 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 41/168 (24%), Positives = 79/168 (47%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+++SWG G N +LG GN P + L I + A HS + S VYTWG G
Sbjct: 459 DIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNG 518
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
+ +LGH + DI + P+ V +++V ++ +++ G+V+ WG+
Sbjct: 519 KFYKLGHGNDDID-----IYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWGTFN 573
Query: 276 EGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWG 323
Y + P+++++ K I++ A+ ++ G++ ++G
Sbjct: 574 ITN-NYVNYYISKLPKQINT-NYKCISIHASTYVCFGITLVGDLISFG 619
Score = 144 (55.7 bits), Expect = 0.00064, Sum P(4) = 0.00064
Identities = 42/162 (25%), Positives = 76/162 (46%)
Query: 165 NYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPD 224
N T H ++ K D VI + +K HS+A G++Y+WGYG GRLG +
Sbjct: 417 NNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSK-HSLACNLHGDIYSWGYGGNGRLGLGN 475
Query: 225 FDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV 284
++ P+ + GL ++R+ + A H+ V+TWG+ + +LG+ +
Sbjct: 476 IKSYN------KPQLI-KGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGND 528
Query: 285 DTQPT-PRRVSSLK--LKIIAVAAANKHTAVVSESGEVFTWG 323
D P+ V L K+ ++ ++ ++ G+V+ WG
Sbjct: 529 DIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 143 (55.4 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 30/122 (24%), Positives = 64/122 (52%)
Query: 253 AAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTA 311
+A H++ G++++WG G+LG ++ + P+ + L+ K I+ V A H+
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSG 504
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLK-GKDLVGVAAAKYHTIVLGAD 370
+ + V+TWG + +LG+G ++ Y P++VE L K + ++ ++++ L
Sbjct: 505 CIDSNYNVYTWGNGKFYKLGHG-NDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVK 563
Query: 371 GE 372
G+
Sbjct: 564 GD 565
Score = 127 (49.8 bits), Expect = 0.00073, Sum P(4) = 0.00073
Identities = 36/120 (30%), Positives = 59/120 (49%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQP---TPRRVSSLKLKIIAVA 304
+VK I + H +V E G+V+T G N+ G+LG + + P ++ KII +A
Sbjct: 753 KVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIA 812
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+ VS+ G V+ WG N + QLG G Y P V++L +++ + A H+
Sbjct: 813 CGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDF--YEPVHVKNLT--NVINIFAGYDHS 868
Score = 75 (31.5 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGH 222
IK IS H++A+ + G +Y+WGY G +G+
Sbjct: 351 IKFISCGDMHTLAICTGGVLYSWGYNNFGCIGN 383
Score = 73 (30.8 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 157 VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLISAAKFHSVA-----VTSLG-EV 209
+F+WG + QLG G N P V F++ I + + V +G V
Sbjct: 41 IFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSV 100
Query: 210 YTWGYGRGGRLGH 222
Y++G G G LG+
Sbjct: 101 YSFGKGNNGLLGY 113
Score = 58 (25.5 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 27/130 (20%), Positives = 50/130 (38%)
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTS-NSASNYTPRVVESLKGKDLVGVAAAK 361
V N +++ E G+++ WG G++G G PR + + + +
Sbjct: 893 VNGVNNYSS--DECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIIN--KIYKCSLGN 948
Query: 362 YHTIVLGADGERVIVARN-------LKKSG------STPLKFHRKIKLHVVSIAAGMVHS 408
H++ L E + N +KS S P K +++ I AG +S
Sbjct: 949 SHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYS 1008
Query: 409 TALTEDGALF 418
L+ DG ++
Sbjct: 1009 IILSVDGFIY 1018
Score = 57 (25.1 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 346 VESLKGKDLVGV---AAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIA 402
V+ + G D V + K +T +GE NLKK P+ + + ++ IA
Sbjct: 754 VKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVN-KIIKIA 812
Query: 403 AGMVHSTALTEDGALFYWASSD 424
G + +++ G ++ W +D
Sbjct: 813 CGYNYVLCVSDVGLVYGWGKND 834
Score = 56 (24.8 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 432 LYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSK 468
L ++C ++ I+ G + V+ G VY W GK K
Sbjct: 800 LLNICVNKIIKIACGYNYVLCVSDVGLVYGW-GKNDK 835
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 145 VVGSGYNSVATEVFSWGSGANYQLG 169
+V N + V+S+G G N LG
Sbjct: 88 LVKKNVNDIGCSVYSFGKGNNGLLG 112
Score = 37 (18.1 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 565 AQCLVEPRNALQLLEISDSLGADDLKKH 592
AQCL++ N + + D L KK+
Sbjct: 1501 AQCLIDLDNPNSFVTLLDQLSRKVPKKN 1528
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 148 (57.2 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 41/168 (24%), Positives = 79/168 (47%)
Query: 156 EVFSWGSGANYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYG 215
+++SWG G N +LG GN P + L I + A HS + S VYTWG G
Sbjct: 459 DIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNG 518
Query: 216 RGGRLGHPDFDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNR 275
+ +LGH + DI + P+ V +++V ++ +++ G+V+ WG+
Sbjct: 519 KFYKLGHGNDDID-----IYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWGTFN 573
Query: 276 EGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEVFTWG 323
Y + P+++++ K I++ A+ ++ G++ ++G
Sbjct: 574 ITN-NYVNYYISKLPKQINT-NYKCISIHASTYVCFGITLVGDLISFG 619
Score = 144 (55.7 bits), Expect = 0.00064, Sum P(4) = 0.00064
Identities = 42/162 (25%), Positives = 76/162 (46%)
Query: 165 NYQLGTGNAHLQKLPCKVDSLHGFVIKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGHPD 224
N T H ++ K D VI + +K HS+A G++Y+WGYG GRLG +
Sbjct: 417 NNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSK-HSLACNLHGDIYSWGYGGNGRLGLGN 475
Query: 225 FDIHSGQAAVITPRRVTSGLGSRRVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSV 284
++ P+ + GL ++R+ + A H+ V+TWG+ + +LG+ +
Sbjct: 476 IKSYN------KPQLI-KGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGND 528
Query: 285 DTQPT-PRRVSSLK--LKIIAVAAANKHTAVVSESGEVFTWG 323
D P+ V L K+ ++ ++ ++ G+V+ WG
Sbjct: 529 DIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 143 (55.4 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 30/122 (24%), Positives = 64/122 (52%)
Query: 253 AAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLKLK-IIAVAAANKHTA 311
+A H++ G++++WG G+LG ++ + P+ + L+ K I+ V A H+
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSG 504
Query: 312 VVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLK-GKDLVGVAAAKYHTIVLGAD 370
+ + V+TWG + +LG+G ++ Y P++VE L K + ++ ++++ L
Sbjct: 505 CIDSNYNVYTWGNGKFYKLGHG-NDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVK 563
Query: 371 GE 372
G+
Sbjct: 564 GD 565
Score = 127 (49.8 bits), Expect = 0.00073, Sum P(4) = 0.00073
Identities = 36/120 (30%), Positives = 59/120 (49%)
Query: 248 RVKTIAAAKHHTVLATEGGEVFTWGSNREGQLGYTSVDTQP---TPRRVSSLKLKIIAVA 304
+VK I + H +V E G+V+T G N+ G+LG + + P ++ KII +A
Sbjct: 753 KVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIA 812
Query: 305 AANKHTAVVSESGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKDLVGVAAAKYHT 364
+ VS+ G V+ WG N + QLG G Y P V++L +++ + A H+
Sbjct: 813 CGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDF--YEPVHVKNLT--NVINIFAGYDHS 868
Score = 75 (31.5 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 190 IKLISAAKFHSVAVTSLGEVYTWGYGRGGRLGH 222
IK IS H++A+ + G +Y+WGY G +G+
Sbjct: 351 IKFISCGDMHTLAICTGGVLYSWGYNNFGCIGN 383
Score = 73 (30.8 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 157 VFSWGSGANYQLGTG-NAHLQKLPCKVDSLHGFVIKLISAAKFHSVA-----VTSLG-EV 209
+F+WG + QLG G N P V F++ I + + V +G V
Sbjct: 41 IFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSV 100
Query: 210 YTWGYGRGGRLGH 222
Y++G G G LG+
Sbjct: 101 YSFGKGNNGLLGY 113
Score = 58 (25.5 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 27/130 (20%), Positives = 50/130 (38%)
Query: 303 VAAANKHTAVVSESGEVFTWGCNREGQLGYGTS-NSASNYTPRVVESLKGKDLVGVAAAK 361
V N +++ E G+++ WG G++G G PR + + + +
Sbjct: 893 VNGVNNYSS--DECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIIN--KIYKCSLGN 948
Query: 362 YHTIVLGADGERVIVARN-------LKKSG------STPLKFHRKIKLHVVSIAAGMVHS 408
H++ L E + N +KS S P K +++ I AG +S
Sbjct: 949 SHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYS 1008
Query: 409 TALTEDGALF 418
L+ DG ++
Sbjct: 1009 IILSVDGFIY 1018
Score = 57 (25.1 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 346 VESLKGKDLVGV---AAAKYHTIVLGADGERVIVARNLKKSGSTPLKFHRKIKLHVVSIA 402
V+ + G D V + K +T +GE NLKK P+ + + ++ IA
Sbjct: 754 VKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVN-KIIKIA 812
Query: 403 AGMVHSTALTEDGALFYWASSD 424
G + +++ G ++ W +D
Sbjct: 813 CGYNYVLCVSDVGLVYGWGKND 834
Score = 56 (24.8 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 432 LYSMCGRNVVSISAGKYWTAAVTATGDVYMWDGKKSK 468
L ++C ++ I+ G + V+ G VY W GK K
Sbjct: 800 LLNICVNKIIKIACGYNYVLCVSDVGLVYGW-GKNDK 835
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 145 VVGSGYNSVATEVFSWGSGANYQLG 169
+V N + V+S+G G N LG
Sbjct: 88 LVKKNVNDIGCSVYSFGKGNNGLLG 112
Score = 37 (18.1 bits), Expect = 1.4e-06, Sum P(5) = 1.4e-06
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 565 AQCLVEPRNALQLLEISDSLGADDLKKH 592
AQCL++ N + + D L KK+
Sbjct: 1501 AQCLIDLDNPNSFVTLLDQLSRKVPKKN 1528
>UNIPROTKB|E1BC59 [details] [associations]
symbol:PPP1R12A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0051297
"centrosome organization" evidence=IEA] [GO:0046822 "regulation of
nucleocytoplasmic transport" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043292 "contractile fiber" evidence=IEA]
[GO:0035507 "regulation of myosin-light-chain-phosphatase activity"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019208 "phosphatase regulator activity" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006470 "protein
dephosphorylation" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0004857 "enzyme inhibitor activity" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR002110
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0005813
GO:GO:0000776 GO:GO:0006470 GO:GO:0007067 GO:GO:0030155
GO:GO:0051297 GO:GO:0004857 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045944
GO:GO:0046822 GO:GO:0043292 GO:GO:0019208 GO:GO:0072357
GO:GO:0035507 InterPro:IPR017401 PIRSF:PIRSF038141
GeneTree:ENSGT00600000084108 OMA:KDYDGWT EMBL:DAAA02012440
EMBL:DAAA02012441 EMBL:DAAA02012442 EMBL:DAAA02012443
EMBL:DAAA02012444 EMBL:DAAA02012445 IPI:IPI00924182
Ensembl:ENSBTAT00000061600 Uniprot:E1BC59
Length = 1028
Score = 151 (58.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 10 GQKQTLQSPARKSSLGGVQ-KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPL 68
G + L+ P K V+ D + + S D + L LL + G +IN N+ GLT L
Sbjct: 19 GSETDLEPPVVKRQKTKVKFDDGAVFLAACSSGDTDEVLKLLHR-GADINYANVDGLTAL 77
Query: 69 HSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLED 128
H A + V +V+ L+ GA+ + D E GW LH A G+L +A L+ GA + +
Sbjct: 78 HQACIDDNVDMVKFLVENGANINQPDNE-GWIPLHAAASCGYLDIAEFLIGQGAHVGAVN 136
Query: 129 CKSRTPVDL 137
+ TP+D+
Sbjct: 137 SEGDTPLDI 145
Score = 52 (23.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 33/136 (24%), Positives = 55/136 (40%)
Query: 874 LSGALDDTPKE-------IALPPPPTPRSEGPAWG-GAKVPKGSASLREIQSE-----QS 920
LS +LD+ KE +A P PR K + S+SLR S +
Sbjct: 476 LSSSLDNKEKEKDSKGTKLAYVTPTIPRRLASTSDIEEKENRDSSSLRTSSSYTRRKWED 535
Query: 921 KIKVNQPTRNKDQFEDP-SFGRSEGKVLLSSFMTSKPIPVVSARA--QQATDGDKSTPPW 977
+K N + SFGR + ++ SS ++ P V++ A Q++ ST
Sbjct: 536 DLKKNSSINEGSTYHKSCSFGRRQDDLISSSVPSTTSTPTVTSAAGLQKSLLSSTSTTTK 595
Query: 978 AASGTPPSLSRPSLRN 993
+G+ + ++ S N
Sbjct: 596 ITTGSSSAGTQSSTSN 611
Score = 45 (20.9 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 32/135 (23%), Positives = 51/135 (37%)
Query: 204 TSLGEVYTWGYGRGGRLGHPDFDIHSGQ--AAVITPRRVTSGLGSRRVKTIAAAKHHTVL 261
+S+ E T Y + G D+ S + TP VTS G ++ +++ T +
Sbjct: 541 SSINEGST--YHKSCSFGRRQDDLISSSVPSTTSTPT-VTSAAGLQK-SLLSSTSTTTKI 596
Query: 262 ATEGGEVFTWGS--NREGQLGYTSVDTQPTPRRVSSLKLKIIAVAAANKHTAVVSESGEV 319
T T S NR T + P V+ + AAA+ T + +G V
Sbjct: 597 TTGSSSAGTQSSTSNRLWAEDSTEKEKDSVPTAVTIPVAPTVVNAAASTTTLTTTTAGTV 656
Query: 320 FTWGCNREGQLGYGT 334
+ RE + Y T
Sbjct: 657 SSTAEVRERRRSYLT 671
Score = 38 (18.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 1012 TAGFSIAP-SQGSPSDSPGMNRWFKPEAETPSSIRSIQMEEKAMKD 1056
T+ AP + +P+ S G P + P+S I +E+ KD
Sbjct: 385 TSSTQAAPVAVTTPTVSSGQPTPTSPIKKFPASATKISPKEEERKD 430
Score = 38 (18.4 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 530 FMFNDESNNMPSAIDKDDSGVRLAPSLKSLCENVAAQ 566
+ +++E S ++KDDS K L E + A+
Sbjct: 909 YSYSEERKPYSSRLEKDDS-----TDFKKLYEQILAE 940
>MGI|MGI:1309528 [details] [associations]
symbol:Ppp1r12a "protein phosphatase 1, regulatory
(inhibitor) subunit 12A" species:10090 "Mus musculus" [GO:0000776
"kinetochore" evidence=ISO] [GO:0004721 "phosphoprotein phosphatase
activity" evidence=ISO] [GO:0004857 "enzyme inhibitor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0006470 "protein dephosphorylation"
evidence=ISO;IMP] [GO:0007067 "mitosis" evidence=ISO] [GO:0019208
"phosphatase regulator activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0030155 "regulation of cell
adhesion" evidence=ISO] [GO:0035507 "regulation of
myosin-light-chain-phosphatase activity" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043292 "contractile fiber" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046822 "regulation of nucleocytoplasmic
transport" evidence=IMP] [GO:0051297 "centrosome organization"
evidence=ISO] [GO:0071889 "14-3-3 protein binding" evidence=ISO]
[GO:0072357 "PTW/PP1 phosphatase complex" evidence=ISO]
InterPro:IPR002110 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
MGI:MGI:1309528 GO:GO:0005813 GO:GO:0000776 GO:GO:0006470
GO:GO:0007067 GO:GO:0030155 GO:GO:0051297 eggNOG:COG0666
GO:GO:0004857 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045944 GO:GO:0046822
GO:GO:0043292 GO:GO:0004721 GO:GO:0071889 EMBL:CH466539
GO:GO:0019208 CTD:4659 HOGENOM:HOG000290648 HOVERGEN:HBG052561
KO:K06270 OrthoDB:EOG4R7V9D GO:GO:0072357 GO:GO:0035507
InterPro:IPR017401 PIRSF:PIRSF038141 GeneTree:ENSGT00600000084108
OMA:KDYDGWT ChiTaRS:PPP1R12A EMBL:AK035230 EMBL:AK004785
EMBL:BC125381 EMBL:BC137630 EMBL:AB042280 IPI:IPI00671847
IPI:IPI00876048 RefSeq:NP_082168.1 UniGene:Mm.422959
UniGene:Mm.489819 ProteinModelPortal:Q9DBR7 SMR:Q9DBR7
DIP:DIP-29982N IntAct:Q9DBR7 STRING:Q9DBR7 PhosphoSite:Q9DBR7
PaxDb:Q9DBR7 PRIDE:Q9DBR7 Ensembl:ENSMUST00000070663 GeneID:17931
KEGG:mmu:17931 UCSC:uc007gzc.1 UCSC:uc007gzd.1 InParanoid:Q05A74
NextBio:292815 PMAP-CutDB:Q9DBR7 Bgee:Q9DBR7 Genevestigator:Q9DBR7
GermOnline:ENSMUSG00000019907 Uniprot:Q9DBR7
Length = 1029
Score = 151 (58.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 10 GQKQTLQSPARKSSLGGVQ-KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPL 68
G + L+ P K V+ D + + S D + L LL + G +IN N+ GLT L
Sbjct: 19 GSETDLEPPVVKRQKTKVKFDDGAVFLAACSSGDTDEVLKLLHR-GADINYANVDGLTAL 77
Query: 69 HSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLED 128
H A + V +V+ L+ GA+ + D E GW LH A G+L +A L+ GA + +
Sbjct: 78 HQACIDDNVDMVKFLVENGANINQPDNE-GWIPLHAAASCGYLDIAEFLIGQGAHVGAVN 136
Query: 129 CKSRTPVDL 137
+ TP+D+
Sbjct: 137 SEGDTPLDI 145
Score = 52 (23.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 36/135 (26%), Positives = 55/135 (40%)
Query: 874 LSGALDDTPKE-------IALPPPPTPRSEGPAWG-GAKVPKGSASLREIQSE-----QS 920
LS +LD+ KE +A P PR K + S+SLR S +
Sbjct: 476 LSSSLDNKEKEKDNKGTRLAYVTPTIPRRLASTSDIEEKENRESSSLRTSSSYTRRKWED 535
Query: 921 KIKVNQPTRNKDQFEDP-SFGRSEGKVLLSSFMTSKPIPVVSARA--QQATDGDKST--- 974
+K N + SFGR + ++ S ++ P V++ A Q++ ST
Sbjct: 536 DLKKNSSINEGSTYHRSCSFGRRQDDLISCSVPSTTSTPTVTSAAGLQRSLPSSTSTAAK 595
Query: 975 -PPWAAS-GTPPSLS 987
PP ++S GT S S
Sbjct: 596 TPPGSSSAGTQSSTS 610
Score = 39 (18.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 544 DKDDSGVRLAPSLKSLCENVAAQCLVEPRNALQL--LEISDSLGA----DDLKKH 592
+KD+ G RLA ++ +A+ +E + + L S S DDLKK+
Sbjct: 486 EKDNKGTRLAYVTPTIPRRLASTSDIEEKENRESSSLRTSSSYTRRKWEDDLKKN 540
>UNIPROTKB|Q96T49 [details] [associations]
symbol:PPP1R16B "Protein phosphatase 1 regulatory inhibitor
subunit 16B" species:9606 "Homo sapiens" [GO:0007165 "signal
transduction" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=IDA;NAS] [GO:0019903 "protein phosphatase binding"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0051489 "regulation of
filopodium assembly" evidence=ISS] InterPro:IPR002110 Pfam:PF00023
PROSITE:PS50088 SMART:SM00248 GO:GO:0005886 GO:GO:0005634
EMBL:CH471077 GO:GO:0007165 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0051489 GO:GO:0019903 HOGENOM:HOG000236276 HOVERGEN:HBG053644
InterPro:IPR017417 PIRSF:PIRSF038159 CTD:26051 OMA:WAQYEKE
OrthoDB:EOG4W6NVX EMBL:AF362910 EMBL:AB020630 EMBL:AL031657
EMBL:AL121889 EMBL:BC131801 EMBL:BC152467 IPI:IPI00045904
RefSeq:NP_001166206.1 RefSeq:NP_056383.1 UniGene:Hs.45719
ProteinModelPortal:Q96T49 SMR:Q96T49 STRING:Q96T49
PhosphoSite:Q96T49 DMDM:22256977 PRIDE:Q96T49
Ensembl:ENST00000299824 GeneID:26051 KEGG:hsa:26051 UCSC:uc002xje.3
GeneCards:GC20P037434 HGNC:HGNC:15850 HPA:HPA049571 MIM:613275
neXtProt:NX_Q96T49 PharmGKB:PA33635 InParanoid:Q96T49
PhylomeDB:Q96T49 GenomeRNAi:26051 NextBio:47912 ArrayExpress:Q96T49
Bgee:Q96T49 CleanEx:HS_PPP1R16B Genevestigator:Q96T49
GermOnline:ENSG00000101445 Uniprot:Q96T49
Length = 567
Score = 150 (57.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 46/144 (31%), Positives = 69/144 (47%)
Query: 20 RKSSLGGVQK----DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRN 75
RK S GG +K + +A+ E SL + + KN + + N GLT LH N
Sbjct: 53 RKRSTGGRRKKVSFEASVALLEASLRNDAEEVRYFLKNKVSPDLCNEDGLTALHQCCIDN 112
Query: 76 QVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPV 135
IV+ LL+ GA+ +A+D E W+ LH A GH+ + +L+Q GA + + P
Sbjct: 113 FEEIVKLLLSHGANVNAKDNEL-WTPLHAAATCGHINLVKILVQYGADLLAVNSDGNMPY 171
Query: 136 DLLSG-PVLQVVGS--GYNSVATE 156
DL P L V+ + Y + E
Sbjct: 172 DLCEDEPTLDVIETCMAYQGITQE 195
Score = 46 (21.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 928 TRNKDQFEDPSFGRSEGKVLLSSFMTSKP 956
TR + +DP+ R E VLLS F T P
Sbjct: 389 TRTDQENKDPN-PRLEKPVLLSEFPTKIP 416
>UNIPROTKB|Q95N27 [details] [associations]
symbol:PPP1R16B "Protein phosphatase 1 regulatory inhibitor
subunit 16B" species:9913 "Bos taurus" [GO:0005886 "plasma
membrane" evidence=ISS] [GO:0051489 "regulation of filopodium
assembly" evidence=IMP] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248 GO:GO:0005886
GO:GO:0005634 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0051489
GeneTree:ENSGT00600000084108 HOGENOM:HOG000236276
HOVERGEN:HBG053644 InterPro:IPR017417 PIRSF:PIRSF038159
EMBL:AF362909 IPI:IPI00692366 RefSeq:NP_777249.1 UniGene:Bt.8543
ProteinModelPortal:Q95N27 STRING:Q95N27 PRIDE:Q95N27
Ensembl:ENSBTAT00000000858 GeneID:282091 KEGG:bta:282091 CTD:26051
InParanoid:Q95N27 OMA:WAQYEKE OrthoDB:EOG4W6NVX NextBio:20805934
Uniprot:Q95N27
Length = 568
Score = 150 (57.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 46/144 (31%), Positives = 69/144 (47%)
Query: 20 RKSSLGGVQK----DLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRN 75
RK S GG +K + +A+ E SL + + KN + + N GLT LH N
Sbjct: 53 RKRSTGGRRKKVSFEASVALLEASLRNDAEEVRYFLKNKVSPDLCNEDGLTALHQCCIDN 112
Query: 76 QVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPV 135
IV+ LL+ GA+ +A+D E W+ LH A GH+ + +L+Q GA + + P
Sbjct: 113 FEEIVKLLLSHGANVNAKDNEL-WTPLHAAATCGHINLVKILVQYGADLLAVNSDGNMPY 171
Query: 136 DLLSG-PVLQVVGS--GYNSVATE 156
DL P L V+ + Y + E
Sbjct: 172 DLCEDEPTLDVIETCMAYQGITQE 195
Score = 46 (21.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 928 TRNKDQFEDPSFGRSEGKVLLSSFMTSKP 956
TR + +DP+ R E VLLS F T P
Sbjct: 390 TRTDQENKDPN-PRLEKPVLLSEFPTKIP 417
>UNIPROTKB|B7ZAU7 [details] [associations]
symbol:RIPK4 "Receptor-interacting serine/threonine-protein
kinase 4" species:9606 "Homo sapiens" [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR002110
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PRINTS:PR01415 PROSITE:PS00108 PROSITE:PS50011
PROSITE:PS50088 SMART:SM00248 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
HOVERGEN:HBG061582 UniGene:Hs.517310 HGNC:HGNC:496 ChiTaRS:RIPK4
EMBL:AP001615 EMBL:AP001616 EMBL:AK316412 IPI:IPI01011254
SMR:B7ZAU7 STRING:B7ZAU7 Ensembl:ENST00000542057
Ensembl:ENST00000544709 Uniprot:B7ZAU7
Length = 721
Score = 149 (57.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 19 ARKSSLGGVQKDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVP 78
ARK S+ +D A+ + ES+ LL + ++N + G TP+H A Q
Sbjct: 429 ARKISVNAKDEDQWTALHFAAQNGDESSTRLLLEKNASVNEVDFEGRTPMHVACQHGQEN 488
Query: 79 IVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLL-QSGASITLEDCKSRTPVDL 137
IVR LL G D + G+ W LH A GHL + +L Q G S+ + RTP+ L
Sbjct: 489 IVRILLRRGVDVSLQ-GKDAWLPLHYAAWQGHLPIVKLLAKQPGVSVNAQTLDGRTPLHL 547
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 38/105 (36%), Positives = 50/105 (47%)
Query: 31 LCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADP 90
L LAV G E L N N N N G TPLH A+ R +V LLA
Sbjct: 379 LHLAVEAGQ----EECAKWLLLNNANPNLSNRRGSTPLHMAVERRVRGVVELLLARKISV 434
Query: 91 DARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPV 135
+A+D E W++LH A G + +LL+ AS+ D + RTP+
Sbjct: 435 NAKD-EDQWTALHFAAQNGDESSTRLLLEKNASVNEVDFEGRTPM 478
>ZFIN|ZDB-GENE-050112-1 [details] [associations]
symbol:psmd10 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 10" species:7955 "Danio rerio" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0055088 "lipid homeostasis"
evidence=IMP] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 ZFIN:ZDB-GENE-050112-1
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0055088 GO:GO:0000502
GeneTree:ENSGT00560000077131 KO:K06694 HSSP:P20749 CTD:5716
HOVERGEN:HBG053737 OMA:YDRANIL EMBL:BX088535 EMBL:AY398401
EMBL:DQ388034 IPI:IPI00493544 RefSeq:NP_991317.1 UniGene:Dr.79936
SMR:Q6TGV5 STRING:Q6TGV5 Ensembl:ENSDART00000019003 GeneID:403085
KEGG:dre:403085 InParanoid:Q6TGV5 NextBio:20816876 Uniprot:Q6TGV5
Length = 226
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 36/94 (38%), Positives = 51/94 (54%)
Query: 44 ESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLH 103
E +L+ K G +NS N G TPLH A +N I + LL GADP+A D + LH
Sbjct: 87 EIVRSLISK-GAQLNSVNQNGCTPLHYAASKNLYEIAQILLENGADPNATDKLQS-TPLH 144
Query: 104 RALHFGHLAVASVLLQSGASITLEDCKSRTPVDL 137
RA G+ + +LL+ AS ++D + TP+ L
Sbjct: 145 RASAKGNYRLIQLLLKESASTNIQDSEGNTPLHL 178
>UNIPROTKB|Q5EA33 [details] [associations]
symbol:ANKRD49 "Ankyrin repeat domain-containing protein
49" species:9913 "Bos taurus" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR002110
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0045893
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BT020736 EMBL:BC104574 IPI:IPI00690590
RefSeq:NP_001014965.1 UniGene:Bt.28711 ProteinModelPortal:Q5EA33
Ensembl:ENSBTAT00000048242 GeneID:540949 KEGG:bta:540949 CTD:54851
GeneTree:ENSGT00390000003919 HOGENOM:HOG000021411
HOVERGEN:HBG054416 InParanoid:Q5EA33 OMA:LHSACRW OrthoDB:EOG4PG620
NextBio:20878928 Uniprot:Q5EA33
Length = 238
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/112 (33%), Positives = 57/112 (50%)
Query: 29 KDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGA 88
K L A + L V+ LL + ++N+R+ TPLH A + + +VR L+A GA
Sbjct: 75 KLLLWAAEKNRLTTVQR---LLSERATHVNTRDEDKYTPLHRAAYNGHLDVVRELIAHGA 131
Query: 89 DPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLLSG 140
D A + GW+ LH A + + VAS LLQ A + + TP+ L +G
Sbjct: 132 DVHAVTVD-GWTPLHSACKWNNARVASFLLQHDADVNAQTKGLLTPLHLAAG 182
>MGI|MGI:1921743 [details] [associations]
symbol:Tnks2 "tankyrase, TRF1-interacting ankyrin-related
ADP-ribose polymerase 2" species:10090 "Mus musculus" [GO:0000209
"protein polyubiquitination" evidence=ISO] [GO:0000242
"pericentriolar material" evidence=ISO] [GO:0000723 "telomere
maintenance" evidence=ISS;IMP] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0003950 "NAD+ ADP-ribosyltransferase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005635 "nuclear envelope" evidence=ISO] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006471 "protein
ADP-ribosylation" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016757 "transferase activity,
transferring glycosyl groups" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0035264 "multicellular organism growth"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0070198 "protein localization to chromosome, telomeric region"
evidence=ISO] [GO:0070213 "protein auto-ADP-ribosylation"
evidence=ISO] [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] InterPro:IPR002110
InterPro:IPR001660 InterPro:IPR011510 InterPro:IPR012317
Pfam:PF00023 Pfam:PF00644 Pfam:PF07647 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50105 PROSITE:PS51059 SMART:SM00248
SMART:SM00454 MGI:MGI:1921743 GO:GO:0005635 GO:GO:0048471
GO:GO:0000139 GO:GO:0016055 GO:GO:0046872 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0040014 GO:GO:0070198 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0035264 GO:GO:0000242
GO:GO:0090263 GO:GO:0000209 GeneTree:ENSGT00700000104124
GO:GO:0000781 GO:GO:0000723 GO:GO:0003950 GO:GO:0070213
HOGENOM:HOG000246964 HOVERGEN:HBG059472 KO:K10799 OrthoDB:EOG45MN4H
CTD:80351 OMA:NSDADRQ ChiTaRS:TNKS2 EMBL:AK047094 EMBL:AK149368
EMBL:AC116128 EMBL:BC063101 IPI:IPI00553366 RefSeq:NP_001157107.1
UniGene:Mm.249310 ProteinModelPortal:Q3UES3 SMR:Q3UES3
STRING:Q3UES3 PaxDb:Q3UES3 PRIDE:Q3UES3 Ensembl:ENSMUST00000025729
GeneID:74493 KEGG:mmu:74493 UCSC:uc008hhu.2 InParanoid:Q8BXH7
NextBio:340952 Bgee:Q3UES3 Genevestigator:Q3UES3 Uniprot:Q3UES3
Length = 1166
Score = 158 (60.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 40/100 (40%), Positives = 57/100 (57%)
Query: 50 LKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFG 109
L +NG N+ +R+ GL PLH+A +V LL GADP+ARD + ++ LH A G
Sbjct: 77 LLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLQHGADPNARDNWN-YTPLHEAAIKG 135
Query: 110 HLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSG 149
+ V VLLQ GA T+ + RT +DL + P + V +G
Sbjct: 136 KIDVCIVLLQHGAEPTIRNTDGRTALDL-ADPSAKAVLTG 174
Score = 151 (58.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 48/136 (35%), Positives = 68/136 (50%)
Query: 2 TELLVSHHGQKQTLQSPARKSSLGGVQKDLCLAVREGSLADVESALALLKKNGGNINSRN 61
T L + + +Q LQ A SLG + D L + DVE+ L ++N R+
Sbjct: 468 TALQMGNENVQQLLQEGA---SLGHSEADRQL-LEAAKAGDVETVKKLCTVQ--SVNCRD 521
Query: 62 IFGL--TPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQ 119
I G TPLH A N+V +V LL GAD A+D + G LH A +GH VA +L++
Sbjct: 522 IEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKD-KGGLVPLHNACSYGHYEVAELLVK 580
Query: 120 SGASITLEDCKSRTPV 135
GA + + D TP+
Sbjct: 581 HGAVVNVADLWKFTPL 596
Score = 133 (51.9 bits), Expect = 0.00015, P = 0.00015
Identities = 43/123 (34%), Positives = 62/123 (50%)
Query: 15 LQSPARKSSL-GGVQKDLCL-AVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAI 72
L P+ K+ L G +KD L + R G+ E +ALL N ++ + TPLH A
Sbjct: 163 LADPSAKAVLTGDYKKDELLESARSGN---EEKMMALLTPLNVNCHASDGRKSTPLHLAA 219
Query: 73 WRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSR 132
N+V IV+ LL GAD A+D + LH A +GH V +L++ GA + D
Sbjct: 220 GYNRVKIVQLLLHHGADVHAKD-KGDLVPLHNACSYGHYEVTELLVKHGACVNAMDLWQF 278
Query: 133 TPV 135
TP+
Sbjct: 279 TPL 281
Score = 127 (49.8 bits), Expect = 0.00066, P = 0.00065
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 37 EGSLADV--ESALALLKK--NGGNINSRNIFGL--TPLHSAIWRNQVPIVRRLLAAGADP 90
+ +L D + LA +KK + N+N R+ G TPLH A N + + LL GAD
Sbjct: 646 DAALLDAAKKGCLARVKKLSSPDNVNCRDTQGRHSTPLHLAAGYNNLEVAEYLLQHGADV 705
Query: 91 DARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPV 135
+A+D + G LH A +GH+ VA++L++ A + D + TP+
Sbjct: 706 NAQD-KGGLIPLHNAASYGHVDVAALLIKYNACVNATDKWAFTPL 749
Score = 41 (19.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 967 ATDGDKSTPPWAASG 981
A+DG KSTP A+G
Sbjct: 206 ASDGRKSTPLHLAAG 220
>ZFIN|ZDB-GENE-050417-46 [details] [associations]
symbol:ankrd49 "ankyrin repeat domain 49"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 ZFIN:ZDB-GENE-050417-46
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 CTD:54851 HOGENOM:HOG000021411 HOVERGEN:HBG054416
OrthoDB:EOG4PG620 EMBL:BC092998 IPI:IPI00484602
RefSeq:NP_001017584.1 UniGene:Dr.84465 ProteinModelPortal:Q567V9
GeneID:550246 KEGG:dre:550246 eggNOG:NOG243147 InParanoid:Q567V9
NextBio:20879509 ArrayExpress:Q567V9 Uniprot:Q567V9
Length = 218
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/107 (34%), Positives = 51/107 (47%)
Query: 34 AVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDAR 93
A A VE +AL + +N + G TPLH A + + LL AGA+ AR
Sbjct: 63 AAERNRCATVERLIAL---DPTLVNCHDSDGYTPLHRAAYSGHHDVASALLKAGANLHAR 119
Query: 94 DGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPVDLLSG 140
+ W LH A +GH VAS+LLQ G+ + TP+ L +G
Sbjct: 120 TADD-WMPLHSACRWGHANVASLLLQWGSEVNAMTAGRLTPLQLAAG 165
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 37/106 (34%), Positives = 56/106 (52%)
Query: 66 TPLHSAIW---RNQVPIVRRLLAAGADP---DARDGESGWSSLHRALHFGHLAVASVLLQ 119
TP +W RN+ V RL+A DP + D + G++ LHRA + GH VAS LL+
Sbjct: 55 TPSELMLWAAERNRCATVERLIAL--DPTLVNCHDSD-GYTPLHRAAYSGHHDVASALLK 111
Query: 120 SGASITLEDCKSRTPVDLLSGPVLQVVGSGYNSVATEVFSWGSGAN 165
+GA++ +RT D + P+ G+ +VA+ + WGS N
Sbjct: 112 AGANL-----HARTADDWM--PLHSACRWGHANVASLLLQWGSEVN 150
>UNIPROTKB|P57078 [details] [associations]
symbol:RIPK4 "Receptor-interacting serine/threonine-protein
kinase 4" species:9606 "Homo sapiens" [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0002009 "morphogenesis of
an epithelium" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002110 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00023 Pfam:PF00069 PRINTS:PR01415 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50088 SMART:SM00248
GO:GO:0005524 GO:GO:0002009 GO:GO:0005737 GO:GO:0016020
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
HOGENOM:HOG000294086 HOVERGEN:HBG061582 EMBL:AB047783 EMBL:AP001743
IPI:IPI00025714 IPI:IPI00215935 UniGene:Hs.517310
ProteinModelPortal:P57078 SMR:P57078 IntAct:P57078 STRING:P57078
PhosphoSite:P57078 DMDM:10719883 PaxDb:P57078 PRIDE:P57078
Ensembl:ENST00000332512 Ensembl:ENST00000352483 UCSC:uc002yzn.1
GeneCards:GC21M043159 HGNC:HGNC:496 HPA:HPA021158 MIM:263650
MIM:605706 neXtProt:NX_P57078 Orphanet:1234 InParanoid:P57078
OMA:DLRFRII PhylomeDB:P57078 BindingDB:P57078 ChEMBL:CHEMBL6083
ChiTaRS:RIPK4 ArrayExpress:P57078 Bgee:P57078 CleanEx:HS_RIPK4
Genevestigator:P57078 GermOnline:ENSG00000183421 Uniprot:P57078
Length = 832
Score = 149 (57.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 19 ARKSSLGGVQKDLCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVP 78
ARK S+ +D A+ + ES+ LL + ++N + G TP+H A Q
Sbjct: 540 ARKISVNAKDEDQWTALHFAAQNGDESSTRLLLEKNASVNEVDFEGRTPMHVACQHGQEN 599
Query: 79 IVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASVLL-QSGASITLEDCKSRTPVDL 137
IVR LL G D + G+ W LH A GHL + +L Q G S+ + RTP+ L
Sbjct: 600 IVRILLRRGVDVSLQ-GKDAWLPLHYAAWQGHLPIVKLLAKQPGVSVNAQTLDGRTPLHL 658
Score = 125 (49.1 bits), Expect = 0.00071, P = 0.00071
Identities = 38/105 (36%), Positives = 50/105 (47%)
Query: 31 LCLAVREGSLADVESALALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADP 90
L LAV G E L N N N N G TPLH A+ R +V LLA
Sbjct: 490 LHLAVEAGQ----EECAKWLLLNNANPNLSNRRGSTPLHMAVERRVRGVVELLLARKISV 545
Query: 91 DARDGESGWSSLHRALHFGHLAVASVLLQSGASITLEDCKSRTPV 135
+A+D E W++LH A G + +LL+ AS+ D + RTP+
Sbjct: 546 NAKD-EDQWTALHFAAQNGDESSTRLLLEKNASVNEVDFEGRTPM 589
>UNIPROTKB|F1MCX6 [details] [associations]
symbol:ZDHHC13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030660
"Golgi-associated vesicle membrane" evidence=IEA] [GO:0016409
"palmitoyltransferase activity" evidence=IEA] [GO:0015095
"magnesium ion transmembrane transporter activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001594 Pfam:PF01529 PROSITE:PS50088 PROSITE:PS50216
SMART:SM00248 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0004871 GeneTree:ENSGT00530000063074
GO:GO:0016409 GO:GO:0030660 GO:GO:0015095 CTD:54503 OMA:RKTPYNL
EMBL:DAAA02062975 EMBL:DAAA02062976 EMBL:DAAA02062977
IPI:IPI00695585 RefSeq:NP_001193070.1 UniGene:Bt.17782
Ensembl:ENSBTAT00000027508 GeneID:514176 KEGG:bta:514176
NextBio:20871209 ArrayExpress:F1MCX6 Uniprot:F1MCX6
Length = 622
Score = 147 (56.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/103 (35%), Positives = 58/103 (56%)
Query: 48 ALLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALH 107
A++ + GG++NS TPLH AI + +P+V LL GADP DGE G+ +H A+
Sbjct: 106 AVVDQLGGDLNS------TPLHWAIRQGHLPMVILLLQYGADPALIDGE-GFCGIHLAVL 158
Query: 108 FGHLAVASVLLQSGASITLEDCKSRTPVDLLSGPVLQVVGSGY 150
F H+ + + L+ G S+ D +TP+ L + VL +G+
Sbjct: 159 FQHMPIIAYLISKGQSVNTIDVNGQTPLMLSANKVLGPEPTGF 201
>UNIPROTKB|F1STJ8 [details] [associations]
symbol:ANKRD49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 GO:GO:0045893 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GeneTree:ENSGT00390000003919 OMA:LHSACRW EMBL:FP236710
RefSeq:XP_003129838.1 UniGene:Ssc.43824 Ensembl:ENSSSCT00000016317
GeneID:100516989 KEGG:ssc:100516989 Uniprot:F1STJ8
Length = 239
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 34/92 (36%), Positives = 50/92 (54%)
Query: 49 LLKKNGGNINSRNIFGLTPLHSAIWRNQVPIVRRLLAAGADPDARDGESGWSSLHRALHF 108
LL + ++N+R+ TPLH A + + +VR L+A GAD A + GW+ LH A +
Sbjct: 93 LLSEKATHVNTRDEDEYTPLHRAAYSGHLDVVRELIANGADVHAVTVD-GWTPLHSACKW 151
Query: 109 GHLAVASVLLQSGASITLEDCKSRTPVDLLSG 140
+ VAS LLQ A I + TP+ L +G
Sbjct: 152 NNTRVASFLLQHDADINAQTKGLLTPLHLAAG 183
WARNING: HSPs involving 270 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1071 1029 0.00081 123 3 11 23 0.46 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 520
No. of states in DFA: 626 (67 KB)
Total size of DFA: 448 KB (2212 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 104.88u 0.14s 105.02t Elapsed: 00:00:05
Total cpu time: 105.03u 0.14s 105.17t Elapsed: 00:00:05
Start: Mon May 20 17:40:09 2013 End: Mon May 20 17:40:14 2013
WARNINGS ISSUED: 2