EDD1 protein (Arabidopsis thaliana)

STRING 9.05

EDD1 protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	EDD1	EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase; glycine-tRNA ligase (1067 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT1G29880	glycyl-tRNA synthetase / glycine--tRNA ligase; glycyl-tRNA synthetase / glycine--tRNA ligase; F [...] (729 aa)		•	•	0.993
	EMB2369	EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucl [...] (973 aa)		•	•	0.897
	AT5G66470	GTP binding / RNA binding; GTP binding / RNA binding; FUNCTIONS IN- RNA binding, GTP binding; L [...] (427 aa)	•	•		0.890
	SSR16	SSR16 (SMALL SUBUNIT RIBOSOMAL PROTEIN 16); structural constituent of ribosome; Encodes ribosom [...] (113 aa)	•		•	0.857
	OVA2	OVA2 (ovule abortion 2); ATP binding / aminoacyl-tRNA ligase/ catalytic/ isoleucine-tRNA ligase [...] (1093 aa)	•	•	•	0.833
	EMB2247	EMB2247 (embryo defective 2247); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / vali [...] (970 aa)		•	•	0.829
	PPDK	PPDK (pyruvate orthophosphate dikinase); kinase/ pyruvate, phosphate dikinase; pyruvate orthoph [...] (963 aa)	•			0.799
	OVA4	OVA4 (ovule abortion 4); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / tryptophan-t [...] (412 aa)		•	•	0.742
	TWN2	TWN2 (TWIN 2); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / valine-tRNA ligase; Re [...] (1108 aa)			•	0.729
	AT4G33760	tRNA synthetase class II (D, K and N) family protein; tRNA synthetase class II (D, K and N) fam [...] (664 aa)	•	•	•	0.714

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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