BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001491
(1068 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2
SV=2
Length = 1130
Score = 1187 bits (3072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/1031 (61%), Positives = 778/1031 (75%), Gaps = 19/1031 (1%)
Query: 1 MELE--VRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGA 58
ME E V V GV +CFVSLP +L+ L+ST S+ L +L +ELRS ++RW VAWSG+
Sbjct: 14 METEAVVNTVAGV-DCFVSLPRQLLHALQSTSSSPLP-PLLPVELRS-GDRRWSVAWSGS 70
Query: 59 TSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAE 118
+SSSS IE+AR FAE ISL D T+V+VRV+ NV KATLVT+EP TEDDWEVLELN+E AE
Sbjct: 71 SSSSSAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELNAELAE 130
Query: 119 AAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVK 178
AAIL+QVRI+HE M+FPLWLH RT+I F VVSTFP K VVQLVPGTEVAVAPKRR N+K
Sbjct: 131 AAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLK 190
Query: 179 KHEDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALTSVAFINPETAENVS 238
+ + N KALLRVQ++D H+ +VKG EL VALTS+A+I+PETA+ S
Sbjct: 191 AKKSQEKECNN-----VKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKHS 245
Query: 239 LCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDSV 298
L SL+L+++ PR+ K + ++ A +K++ SK G S+ KKE RQA++ L+FSD
Sbjct: 246 LESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDLA 305
Query: 299 AKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLE 358
AKGH+ + +LRLYL AGLHSWVYL+ C VN KEIP +SLSPC FK+ E +K G +
Sbjct: 306 AKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGTD 365
Query: 359 -LDNKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALSSEPSSKEDEEAVYQFENKKGLE 417
L N N K + Y+D D S D ++ ALSSE E +NKKGLE
Sbjct: 366 RLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHD----KNKKGLE 421
Query: 418 CLLHTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGALENKT 477
L W LAQL A+AS G + ++L++ ET HFEV+G +S S N E+
Sbjct: 422 YLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGK 481
Query: 478 KARELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSF 537
K + EI V+T S+ESL G K Y+L+L+ R ++++N + + K+N G+ +
Sbjct: 482 KDKHTPLEILYVMTVSDESLLGDKFAGYDLSLD-RSEKSDNVVHIEPVLEKMNLGEPIYL 540
Query: 538 YTVKERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHG 597
+ KE +G ++SSL+WMG SDVI R+ VLLSP +G+WFS + +P PGHILI+G
Sbjct: 541 KSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYG 600
Query: 598 PPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPS 657
PPGSGKT LA+A AK E KDL+AH++ V CS L+LEK I LS+ I+E L+HAPS
Sbjct: 601 PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS 660
Query: 658 IVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQ 717
++I D+LDSIISSSSD EG+Q S V LTKFL D++D+YGE R SSCGIGP+AFVAS Q
Sbjct: 661 VIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ 720
Query: 718 SLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYD 777
SLE+IPQ+L+SSGRFDFHVQL APA SER AIL+HEIQ+R L+CS++ILL++A+KC+GYD
Sbjct: 721 SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYD 780
Query: 778 AYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAE 837
AYDLEILVDR VHAA+GR+L +S+ K+ LV++DF++AMH+F+PVAMRDITK+++E
Sbjct: 781 AYDLEILVDRAVHAAIGRHLPLESNISKY---NLVKEDFTRAMHDFVPVAMRDITKSASE 837
Query: 838 GGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
GGR GW+DVGG+TDI+NAIKEMIELPSKFP IFA++PLRLRSNVLLYGPPGCGKTHIVGA
Sbjct: 838 GGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGA 897
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA AAAPC+LFFDEFDSIAPKRGHDN
Sbjct: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDN 957
Query: 958 TGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER 1017
TGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD ALLRPGRLDRLL CDFPSP ER
Sbjct: 958 TGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPER 1017
Query: 1018 LDILKVISRKV 1028
L+IL V+SRK+
Sbjct: 1018 LEILTVLSRKL 1028
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 42/261 (16%)
Query: 564 SDVINRIKVLLSPDSGL--WFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLV 621
+D+ N IK ++ S F+ L L ++L++GPPG GKT + A A +
Sbjct: 850 TDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAA-------- 901
Query: 622 AHIVFVCCSRLSLEKGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSD 673
C R KGP + QA+ + S+A AP I+ FD DSI
Sbjct: 902 ------CSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIA----- 950
Query: 674 PEGSQPSTSVI--ALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGR 731
P+ +T V + +FL ++ G F A+++ + + +L GR
Sbjct: 951 PKRGHDNTGVTDRVVNQFLTEL-------DGVEVLTGVFVFAATSRP-DLLDPALLRPGR 1002
Query: 732 FDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVH 790
D + P+ ER IL + R L +D+I L+ +A +G+ DL+ L+
Sbjct: 1003 LDRLLLCDFPSPPERLEILT--VLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQL 1060
Query: 791 AAVGRYLHSDSSFEKHIKPTL 811
AAV YL+ + E P +
Sbjct: 1061 AAVHEYLNREDKPETGTTPII 1081
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 340 bits (873), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 275/445 (61%), Gaps = 26/445 (5%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L+ G GSGK++LAKA+ K E L AH+ V C L ++ I++ L SE
Sbjct: 593 GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A+ PS+V+ D+LD I + PE +V + L L D++ E+ +G
Sbjct: 651 AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-------ISMG 703
Query: 709 P-IAFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLEC---- 761
+A +A++QS + + P +++ G F VQ P E++ + + + L+C
Sbjct: 704 SLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINK 763
Query: 762 -SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAM 820
+D L VA + G+ A D +LVDR +H+ + R S S+ EK + TL DF +A+
Sbjct: 764 FTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSR--QSISTREKLVLTTL---DFQKAL 818
Query: 821 HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSN 880
FLP ++R + GWD +GGL +++ + + I+LP+K+P +FA P+R R+
Sbjct: 819 RGFLPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTG 876
Query: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCL 940
+LLYGPPG GKT + G A + FISVKGPELL+KYIGASEQAVRDIF +A AA PC+
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCI 936
Query: 941 LFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRP 1000
LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRP
Sbjct: 937 LFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP 996
Query: 1001 GRLDRLLFCDFPSPRERLDILKVIS 1025
GRLD+ ++C P RL+IL V+S
Sbjct: 997 GRLDKCVYCPPPDQVSRLEILNVLS 1021
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIE------ 66
+CF+ LP +L+ L HLL NQ V WS + S++E
Sbjct: 26 DCFLHLPRRLVAQL------HLL-----------QNQAIEVVWSHQPAFLSWVEGRHFSD 68
Query: 67 -------VARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEA 119
+ RQ + + L++ V ++ S+V+ V +EPL+ DDWE+LEL++ E
Sbjct: 69 QGENVAEINRQVGQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQ 128
Query: 120 AILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NN 176
+L+Q+RIV FP+W+ +T I +V+ P +L T++ + PK R+ N
Sbjct: 129 HLLDQIRIVFPKAIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTRRAKENT 188
Query: 177 VKKHEDSY 184
K + Y
Sbjct: 189 FSKADAEY 196
>sp|Q54GX5|PEX1_DICDI Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1
PE=3 SV=1
Length = 1227
Score = 330 bits (846), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 191/466 (40%), Positives = 274/466 (58%), Gaps = 34/466 (7%)
Query: 586 HLPLPG--HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQA 643
L PG ++I G GSGK+ LA ++ A I+ + C++L K IR+
Sbjct: 596 QLNTPGVNGMIIAGSHGSGKSLLATSLGGYYSTDSRSNAFIIKLDCNQLKELKVENIRKQ 655
Query: 644 LSNFISEALDHAPS---------------IVIFDNLDSIISSSSDPEGSQPSTSVIALTK 688
+ ++ + + I+I ++LD I+ + +D Q S I +
Sbjct: 656 FNKLFYKSCKESGNTLSATTSTNTTPPPIIIILESLDLILGTPND----QDPGSKIRCEQ 711
Query: 689 FLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKA 748
+ I + + S I IA V S+QSL QS+ F ++L AP ER
Sbjct: 712 LVSHIKSLCFKYQNRSSPIVMIATVISSQSL---CQSIQIPELFGLTIELQAPTREERVE 768
Query: 749 ILEHEIQRRSLECSDEI---LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK 805
ILE ++ + + D+ L+ ++ +GY D+E +VDR++H + + + ++++
Sbjct: 769 ILERYLKYQGKQLKDQQSLNLMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNND 828
Query: 806 HIKPTLVRDDFS---QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIEL 862
+ + FS +A + P+ ++ I S+E W D+GGL ++ +KE IE
Sbjct: 829 DNDDDNIIE-FSIIEKAKEGYTPITLKGIKLHSSE---IKWQDIGGLDSVRAMLKETIEW 884
Query: 863 PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGAS 922
P+K+P +F +PLRLRS +LLYGP GCGKT + A A C L FISVKGPELLNKYIG+S
Sbjct: 885 PTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSS 944
Query: 923 EQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVF 982
EQ VRD+FS+A++A PC+LFFDEFDSIAP+RGHDN+GVTDRVVNQFLT+LDGVE LTGV+
Sbjct: 945 EQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTGVY 1004
Query: 983 VFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKV 1028
V AATSRPDL+D ALLRPGRLD+ L+C+ P ERLDIL + K+
Sbjct: 1005 VLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKM 1050
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 106/183 (57%), Gaps = 12/183 (6%)
Query: 1 MELEVRVVGGVENCFVSLPLKLIETL------ESTRSAHLLPQVLSLELRSRSNQRWVVA 54
MEL V++ + CFVSLP K++ +L +S L ++ + ++ + V
Sbjct: 1 MELHVQLKHSTD-CFVSLPPKIVHSLLLLSEKQSKSLGTLGLEITWYDKINKKENKGYVG 59
Query: 55 WSGATSSSSF---IEVARQFAECIS-LADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVL 110
W+G ++ F IE++++ A+C+ + + ++++ ++N+ A V +EPLT DDWE++
Sbjct: 60 WAGGSTDPRFTDSIEMSQEMAQCLGGIKNEQKLKLKALNNIELAHSVQVEPLTSDDWEIM 119
Query: 111 ELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAP 170
E++ ++ E +LNQV I++ P+W+H +TII V T P PVV+L +E+ VAP
Sbjct: 120 EVHQQYLEEQLLNQVNILYSGQIVPIWIHHKTIIKLKVTETLP-TPVVKLSSNSEIIVAP 178
Query: 171 KRR 173
K R
Sbjct: 179 KPR 181
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 33/177 (18%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + L L IL++GP G GKT LA A+A C KGP +
Sbjct: 892 FQSSPLRLRSGILLYGPTGCGKTLLASAIAGE--------------CGLNFISVKGPELL 937
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q + + S A P ++ FD DSI P ++ V +
Sbjct: 938 NKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIA-----PRRGHDNSGVTD------RV 986
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
++++ + G+ + +A+ + I +L GR D + P +ER IL
Sbjct: 987 VNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDIL 1043
>sp|Q5BL07|PEX1_MOUSE Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2
Length = 1284
Score = 327 bits (838), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 193/451 (42%), Positives = 271/451 (60%), Gaps = 30/451 (6%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +LI G GSGK++ AKA+ K E L A + V C L ++ I++AL SE
Sbjct: 594 GALLITGGKGSGKSTFAKAICK--EAQDTLDARVETVDCKALRGKRLESIQKALEVAFSE 651
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A PS+++ D+LD I S PE +V + L L D++ E+ S G
Sbjct: 652 AAWRQPSVILLDDLDLIAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEF-----VSTG-S 705
Query: 709 PIAFVASAQSLEKIPQSLTSS-GRFDF----HVQLPAPAASERKAILEHEIQRRSLECSD 763
+A +A++Q + + SL S+ G F H+Q P P E++ + H + + L C
Sbjct: 706 LVALIATSQLQQSLHPSLVSAQGIHTFQCVQHLQPPNP---EQRCEILHSVVKNKLGCDI 762
Query: 764 EILLDVASKC-----DGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQ 818
D+ +C + + A D +LVDR +H+++ R S TL DF +
Sbjct: 763 SNFPDLDLQCIAKDTEAFVARDFTVLVDRAIHSSLSRQHSSSRE-----DLTLTTSDFQK 817
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
A+ FLP ++R++ GWD +GGL +++ + + I+LP+K+P +FA P+R R
Sbjct: 818 ALRGFLPASLRNVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQR 875
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
+ +LLYGPPG GKT + G A + FIS+KGPELL+KYIGASEQAVRD+F +A AA P
Sbjct: 876 TGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKP 935
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALL 998
C+LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALL
Sbjct: 936 CILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALL 995
Query: 999 RPGRLDRLLFCDFPSPRERLDILKVISRKVC 1029
RPGRLD+ ++C P RL+IL V+S+ +
Sbjct: 996 RPGRLDKCVYCPPPDQVSRLEILTVLSKSLA 1026
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 26/254 (10%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQ---RWVVAWSGATSSSSFIEVAR 69
+CF+ LP +L+ L HLL Q ++E+ S WV S + E+ R
Sbjct: 26 DCFLHLPRRLVAQL------HLL-QNQAIEVASDHQPTYLSWVEGRHFNDQSENVAEINR 78
Query: 70 QFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVH 129
Q + + L+ V +R S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV
Sbjct: 79 QVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILELHAISLEQHLLDQIRIVF 138
Query: 130 EAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NNVKKHEDSYMQ 186
P+W+ +T I +V+ P P +L T++ + PK R+ + K D++ Q
Sbjct: 139 PKAVVPIWVDQQTYIFIQIVTLMPAAPYGRLETNTKLLIQPKTRQAKESTFPKEGDAHGQ 198
Query: 187 AFN---ESTSIAKALL--RVQDSDEGLS----HKCNVKGVELG----VALTSVAFINPET 233
+ E ++K L ++ + EG++ V G L L S+ P++
Sbjct: 199 VHSYGREQKGLSKELQTRQLHTNSEGITASNGRDPKVPGGPLKPSWWAVLGSMLSFGPDS 258
Query: 234 AENVSLCSLELVAI 247
+ + SLEL A
Sbjct: 259 KQESAWGSLELGAF 272
>sp|P46463|PEX1_PICPA Peroxisome biosynthesis protein PAS1 OS=Komagataella pastoris GN=PEX1
PE=3 SV=1
Length = 1157
Score = 326 bits (836), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 184/483 (38%), Positives = 272/483 (56%), Gaps = 61/483 (12%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G L+ G GSGK+ + VA+ + + V + C ++ E +R + SE
Sbjct: 517 GGSLLFGTSGSGKSLVISQVAQIVTNKGHFVK---LLNCDKIMSESYNNLRGIFEDIFSE 573
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPI 710
APS++I ++LDS+I + + S S L+++ + + R I
Sbjct: 574 VSWKAPSLLILEDLDSLIPAEQEHSDSSQSRQ---LSEYFISKLSAQTINRD-------I 623
Query: 711 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSD-EILLDV 769
+AS++S E + + ++ + QL AP RK IL+ + ++ CS+ E+L ++
Sbjct: 624 TILASSKSKESLNSLIFTTHLIEHDFQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNI 683
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIK--------------------- 808
A + +GY DL++L DR H + R + +DS E I+
Sbjct: 684 AVETEGYLPKDLKVLCDRAYHDLISRDILADSDSELDIEESSTPILNGSVGDIANKQSEI 743
Query: 809 -----------------------PTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDD 845
T+ +D+F A+ ++P ++R + ++ WDD
Sbjct: 744 ENGISGLELTNNSSSTIAVDKHGATIQKDNFDSALSGYIPQSLRGVKLQKSD---VRWDD 800
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL D ++ + E +E P+K+ IF+ PLRLRS +LLYG PGCGKT + A AA C L
Sbjct: 801 IGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAAQCGLN 860
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 965
FIS+KGPE+LNKYIG SEQ+VR++F +A AA PC+LFFDEFDSIAPKRGHD+TGVTDRVV
Sbjct: 861 FISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVV 920
Query: 966 NQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVIS 1025
NQ LT++DG E L GV+V AATSRPDL+D+ALLRPGRLD+ + CD P +RLDIL+ ++
Sbjct: 921 NQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVT 980
Query: 1026 RKV 1028
R +
Sbjct: 981 RNM 983
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 46 RSNQRWVV--AWSGA----TSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTI 99
R+ QR + W+G +SS+ IE+ R A I L ++ V V V + +KA V +
Sbjct: 49 RAAQRRIAYCGWAGGITKTSSSNPVIEIDRSLASAIDLQENVNVTVNVHIDAVKAITVEL 108
Query: 100 EPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHV------VSTFP 153
EP+T +DWE++E +++ E +LNQ R V+ ++ +T V VSTF
Sbjct: 109 EPVTSNDWEIVETHAQVLETYLLNQTRCVYPNQVLVVYPTPQTTARLLVKKIEPEVSTF- 167
Query: 154 KKPVVQLVPGTEVAVAPKRRK 174
QL TEV +APK +K
Sbjct: 168 ----AQLFNDTEVQIAPKVQK 184
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 89/231 (38%), Gaps = 36/231 (15%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
FS+ L L IL++G PG GKT LA AVA C KGP I
Sbjct: 825 FSSCPLRLRSGILLYGYPGCGKTLLASAVAAQ--------------CGLNFISIKGPEIL 870
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q++ A P I+ FD DSI P+ ST V +
Sbjct: 871 NKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIA-----PKRGHDSTGVTD------RV 919
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
+++ + + G+ + +A+ + I +L GR D V P +R IL+
Sbjct: 920 VNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSV 979
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSF 803
R++ S + L VA +C G+ DL+ L AV L D S
Sbjct: 980 T--RNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKLTKDESM 1028
>sp|P24004|PEX1_YEAST Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX1 PE=1 SV=2
Length = 1043
Score = 292 bits (748), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 250/447 (55%), Gaps = 41/447 (9%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL----SLEKGPIIRQALSNFI 648
I++ G G GKT L K + +E KD + + C L +L+K ++ + +
Sbjct: 457 IILDGKQGIGKTRLLKELINEVE--KDHHIFVKYADCETLHETSNLDK---TQKLIMEWC 511
Query: 649 SEALDHAPSIVIFDNLDSII----SSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
S + PS+++ DN++++ ++ DP + + L F ++ + + K
Sbjct: 512 SFCYWYGPSLIVLDNVEALFGKPQANDGDPSNNGQWDNASKLLNFFINQVTKIFNKDNKR 571
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHV-----QLPAPAASERKAILEHEIQRRSL 759
I + S + +I L FD H L AP R +LE+ + +
Sbjct: 572 -----IRVLFSGKQKTQINPLL-----FDKHFVSETWSLRAPDKHARAKLLEYFFSKNQI 621
Query: 760 E--CSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFS 817
D D++ + +G+ DLEI ++ + D E+ + R+ FS
Sbjct: 622 MKLNRDLQFSDLSLETEGFSPLDLEIFTEKIFY---------DLQLERDCDNVVTRELFS 672
Query: 818 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+++ F P A+R + T + W D+G L + ++ + E +E P+K+ IF PLRL
Sbjct: 673 KSLSAFTPSALRGVKLTKETNIK--WGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRL 730
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
RS +LLYG PGCGKT + A A C L FISVKGPE+LNK+IGASEQ +R++F +A +
Sbjct: 731 RSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVK 790
Query: 938 PCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAAL 997
PC+LFFDEFDSIAPKRGHD+TGVTDRVVNQ LT++DG E L GV++ AATSRPDL+D+AL
Sbjct: 791 PCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSAL 850
Query: 998 LRPGRLDRLLFCDFPSPRERLDILKVI 1024
LRPGRLD+ + C+ P+ ERLDIL+ I
Sbjct: 851 LRPGRLDKSVICNIPTESERLDILQAI 877
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 12/187 (6%)
Query: 3 LEVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVV--AWSGATS 60
L ++ + F+ LP +I LEST A Q + + S ++ +V W G S
Sbjct: 12 LRIQFSNAIVGNFLRLPHSIINVLESTNYA---IQEFGIAVHSHNSDIPIVHLGWDGHDS 68
Query: 61 SSS--FIEVARQFAECISLADHTIV---QVRVVSNVLKATLVTIEPLTEDDWEVLELNS- 114
SS + + A L + + ++ + AT V + P T DDWE+++ N+
Sbjct: 69 GSSENVVLINPVLATVYDLNQKSPLVDLYIQRYDHTHLATEVYVTPETSDDWEIIDANAM 128
Query: 115 EHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK 174
IL+Q RIV +L G + F + P ++ G+ V VAPK K
Sbjct: 129 RFQNGEILHQTRIVTPGETLICYLEG-IVTKFKIDRVEPSMKSARITDGSLVVVAPKVNK 187
Query: 175 NNVKKHE 181
+ K E
Sbjct: 188 TRLVKAE 194
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 89/228 (39%), Gaps = 43/228 (18%)
Query: 587 LPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII------ 640
L L IL++G PG GKT LA AVA+ C KGP I
Sbjct: 728 LRLRSGILLYGYPGCGKTLLASAVAQQ--------------CGLNFISVKGPEILNKFIG 773
Query: 641 --RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYG 698
Q + A P I+ FD DSI P+ ST V ++++
Sbjct: 774 ASEQNIRELFERAQSVKPCILFFDEFDSIA-----PKRGHDSTGVTD------RVVNQLL 822
Query: 699 EKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRR- 757
+ + G+ + +A+ + I +L GR D V P SER IL+ + +
Sbjct: 823 TQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKD 882
Query: 758 --------SLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL 797
+LE + ++ L +A K G+ DL+ L +V R+L
Sbjct: 883 KDTGQKKFALEKNADLKL-IAEKTAGFSGADLQGLCYNAYLKSVHRWL 929
>sp|O74941|PEX1_SCHPO Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex1 PE=3 SV=1
Length = 937
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 250/436 (57%), Gaps = 20/436 (4%)
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEA 651
+I I+GP G GK++L ++ + + + + V CS + + +N +A
Sbjct: 374 NIYINGPKGCGKSNLVHSLFDY--YSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQA 431
Query: 652 LDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIA 711
+ PSI+ D++ +ISSS+ E + FL + KRK I
Sbjct: 432 ERYEPSIIYLDDVHCLISSSN--ENGELGFVEEREIAFLQHQIINLKRKRK-------II 482
Query: 712 FVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVAS 771
F+ + ++L F + LP+ A + RK IL Q + + + + ++
Sbjct: 483 FIGFGEEFLTFSENLVLPLLFQIKIALPSLAVTRRKEILTTIFQENFSDITMDSIEFISV 542
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDI 831
K +GY DL + V R + A ++ + KH+ + + + + +F+P+ +R
Sbjct: 543 KTEGYLMTDLVLFVKRLLSEA---FVEKIQNGPKHL---MNKGLIEKTLKDFVPLQLR-- 594
Query: 832 TKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGK 891
K W D+ G+ + + A++++IE P K+ I+ Q LRL + +LL+G PGCGK
Sbjct: 595 -KAKFVKSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGK 653
Query: 892 THIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAP 951
T++ A ++ ++FIS+KGPELL+KYIG SEQ VRD+FS+A A PC+LFFDEFDS+AP
Sbjct: 654 TYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAP 713
Query: 952 KRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDF 1011
+RG D+TGVTDRVVNQ LT++DG E L GV++ AAT+RPD++D ALLRPGRLD+L+FCD
Sbjct: 714 RRGQDSTGVTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDL 773
Query: 1012 PSPRERLDILKVISRK 1027
P+ ERL++L+ ++ +
Sbjct: 774 PNEEERLEVLQKLANR 789
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 10 GVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIEVAR 69
+ +C V++P L+E++ + + V+ ++ + + SG S SF E+
Sbjct: 9 SLRSCLVNVPELLLESISEPVQNYAVQAVVC---KNDIKKTFYFGISGIPSQFSF-EIDS 64
Query: 70 QFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVH 129
+A + LA++ + + ++ + + IEP+T +DWE+ E N+ E +L Q R V
Sbjct: 65 TYAHTLKLAENQEINLSIIDCTHEIEQLEIEPVTSNDWEIAERNAAWLEENLLVQYR-VA 123
Query: 130 EAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVKKHED 182
RF ++L T I F + P +L+ TEV + PK + ++ E+
Sbjct: 124 TTERFIIYLPSGTFIQFQPLKLIPSSLCGRLLRTTEVLITPKPNTSAIEVKEN 176
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 579 GLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP 638
L + L LP IL+ G PG GKT LA A++ + + F+ KGP
Sbjct: 629 SLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFP--------VQFISI------KGP 674
Query: 639 II--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 690
+ Q + + S A P ++ FD DS+ P Q ST V
Sbjct: 675 ELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVA-----PRRGQDSTGVTD----- 724
Query: 691 VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
++++ + + + + VA+ + I +L GR D + P ER +L
Sbjct: 725 -RVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVL 783
Query: 751 EHEIQRRSLECSDEILLDVASKCDGYDAYDLEILV 785
+ R +E + +L +++ DGY DL L+
Sbjct: 784 QKLANRFHIE-NAAMLKKLSTLTDGYTYADLSSLL 817
Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 866 FPNIFAQA--PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFIS----VKGPELLNKYI 919
FP+ FAQ + L N+ + GP GCGK+++V + SL I V E+
Sbjct: 358 FPHEFAQVRNAVFLHQNIYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSF 417
Query: 920 GASEQAVRDIFSKATAAAPCLLFFDE 945
+ ++F +A P +++ D+
Sbjct: 418 AKFQSFWNNVFIQAERYEPSIIYLDD 443
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM
1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat PE=1
SV=1
Length = 745
Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 244/452 (53%), Gaps = 30/452 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P ++++GPPG+GKT +A+AVA + A+ + + + +
Sbjct: 216 FERLGITPPKGVILYGPPGTGKTLIARAVAN------ESGANFLSINGPEIMSKYYGQSE 269
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q L S+A + APSI+ D +DSI + +G + V+A L+D M E G
Sbjct: 270 QKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQG-EVERRVVAQLLTLMDGMKERGH-- 326
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+ + + ++ I +L GRFD +++ P + RK IL + L
Sbjct: 327 --------VIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGM 378
Query: 762 SDE----ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS---DSSFEKHI--KPTLV 812
S+E L ++A G+ DL LV + A+ RYL D I K +
Sbjct: 379 SEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVT 438
Query: 813 RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQ 872
DDF A+ P ++R++ E WDD+GGL D++ IKE +ELP P++F +
Sbjct: 439 EDDFKNALKSIEPSSLREVM---VEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKR 495
Query: 873 APLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSK 932
+R LLYGPPG GKT + A A + FIS+KGPE+L+K++G SE+A+R+IF K
Sbjct: 496 LGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKK 555
Query: 933 ATAAAPCLLFFDEFDSIAPKRG-HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
A AP ++F DE DSIAP+RG ++GVT+R+VNQ LT LDG+EV+ GV V AT+RPD
Sbjct: 556 AKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPD 615
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKV 1023
++D ALLR GR D+L++ P RL ILKV
Sbjct: 616 IMDPALLRAGRFDKLIYIPPPDKEARLSILKV 647
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 116/192 (60%)
Query: 837 EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVG 896
E R ++D+GGL++ I+EMIELP K P +F + + V+LYGPPG GKT I
Sbjct: 183 EVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIAR 242
Query: 897 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 956
A A F+S+ GPE+++KY G SEQ +R+IFSKA AP ++F DE DSIAPKR
Sbjct: 243 AVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEV 302
Query: 957 NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 1016
V RVV Q LT +DG++ V V AT+R D +D AL RPGR DR + P
Sbjct: 303 QGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNG 362
Query: 1017 RLDILKVISRKV 1028
R +IL + +R +
Sbjct: 363 RKEILMIHTRNM 374
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
LL PD F + L++GPPG GKT LAKAVA ++ F+
Sbjct: 487 LLKPD---VFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATE--------SNANFISI--- 532
Query: 633 SLEKGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVI 684
KGP + +A+ +A AP+IV D +DSI +TS
Sbjct: 533 ---KGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRG-------TTSDS 582
Query: 685 ALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAAS 744
+T+ +V+ + + + G+ + + + + +L +GRFD + +P P
Sbjct: 583 GVTERIVNQLLTSLDGIEVMNGV---VVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKE 639
Query: 745 ERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEIL 784
R +IL+ + L D L D+A + +GY DLE L
Sbjct: 640 ARLSILKVHTKNMPL-APDVDLNDIAQRTEGYVGADLENL 678
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/454 (36%), Positives = 248/454 (54%), Gaps = 31/454 (6%)
Query: 581 WFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII 640
FS++ + P IL+HGPPG+GKT L + VA + AH++ + + +
Sbjct: 270 LFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSN------AHVLTINGPSIVSKYLGET 323
Query: 641 RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEK 700
AL + +EA + PSI+ D +DSI + ++ + + + V+A L+ +MD G
Sbjct: 324 EAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVAT---LLTLMDGMG-- 378
Query: 701 RKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE 760
G + +A+ + +L GRFD V++ P R IL + R S
Sbjct: 379 -----AAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMS-- 431
Query: 761 CSDEILLD------VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK-HIKPTLVR 813
SD +LD +ASK GY DL L +V + R L +D++ +K +K TL
Sbjct: 432 -SDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTL-- 488
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
D AM + P AMR+I E + W D+GG +++ +KEMI+LP + FA+
Sbjct: 489 KDVESAMVDIRPSAMREIF---LEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARL 545
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
+ VLLYGPPGC KT A A + F++VKGPE+ NKY+G SE+A+R+IF KA
Sbjct: 546 GISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKA 605
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
+AAP ++FFDE D+++P R +T + V+ L E+DGVE L GV + AAT+RPD +
Sbjct: 606 RSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEI 665
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
DAALLRPGRLDR ++ P RL+ILK ++K
Sbjct: 666 DAALLRPGRLDRHIYVGPPDVNARLEILKKCTKK 699
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F+ + P +L++GPPG KT AKA+A + I F+ KGP I
Sbjct: 542 FARLGISAPKGVLLYGPPGCSKTLTAKALATE--------SGINFLAV------KGPEIF 587
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+A+ +A APSI+ FD +D++ S D +GS S + LT L +I
Sbjct: 588 NKYVGESERAIREIFRKARSAAPSIIFFDEIDAL---SPDRDGSSTSAANHVLTSLLNEI 644
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
D E + + VA+ ++I +L GR D H+ + P + R IL+
Sbjct: 645 -DGVEELKG-------VVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKC 696
Query: 754 IQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAV 793
++ + E S L ++A + +GY ++ +L AA+
Sbjct: 697 TKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 273 bits (698), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 243/453 (53%), Gaps = 30/453 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P +L+ GPPG+GKT LAKAVA + A+ + + +
Sbjct: 205 FEKLGIEPPKGVLLVGPPGTGKTLLAKAVAN------EAGANFYVINGPEIMSKYVGETE 258
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+ L EA ++APSI+ D +D+I + G L L+ +MD
Sbjct: 259 ENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERR----LVAQLLTLMD------ 308
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
G G + + + + +L GRFD + + P RK IL+ I R++
Sbjct: 309 -GLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQ--IHTRNMPL 365
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHS-DSSFEKHIKPTL-----VRD 814
++++ LD +A G+ DL L A+ R L S D E+ K L D
Sbjct: 366 AEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMD 425
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF +A+ + P AMR++ E W+D+GGL +++ ++E +E P K +F +
Sbjct: 426 DFKEALKDVEPSAMREVL---VEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIG 482
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+R VLL+GPPG GKT + A A FISVKGPE+ +K++G SE+A+R+IF KA
Sbjct: 483 VRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKAR 542
Query: 935 AAAPCLLFFDEFDSIAPKRGHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
+APC++FFDE D+IAPKRG D ++ VTD+VVNQ LTELDG+E V V AAT+RPD++
Sbjct: 543 QSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDII 602
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISR 1026
D ALLRPGRLDR++ P + RLDI K+ +R
Sbjct: 603 DPALLRPGRLDRVILVPVPDEKARLDIFKIHTR 635
Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 110/184 (59%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GGL + ++EMIELP + P +F + + VLL GPPG GKT + A A
Sbjct: 178 YEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEA 237
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
F + GPE+++KY+G +E+ +R IF +A AP ++F DE D+IAPKR V
Sbjct: 238 GANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVER 297
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
R+V Q LT +DG++ V V AT+RP+ LD AL RPGR DR + P R +IL+
Sbjct: 298 RLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQ 357
Query: 1023 VISR 1026
+ +R
Sbjct: 358 IHTR 361
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L+ GPPG+GKT LAKAVA + F+ KGP I
Sbjct: 478 FEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGAN--------FISV------KGPEIF 523
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
+A+ +A AP I+ FD +D+I S + V+ +D
Sbjct: 524 SKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDG 583
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
M+E + + +A+ + I +L GR D + +P P R I +
Sbjct: 584 MEEPKD----------VVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFK-- 631
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL- 811
I RS+ ++++ L ++A K +GY D+E L AV + E ++ +
Sbjct: 632 IHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELIN 691
Query: 812 ----VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMI 860
+ F A E V + SAE G ++++NAI ++I
Sbjct: 692 YLQSISGTFRAAAVELNSVIKATKERESAEAGE--------FSELKNAIGKII 736
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628
/ NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 249/458 (54%), Gaps = 46/458 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L++GPPG+GKT +AKAVA ++ H F+ S GP I
Sbjct: 208 FQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAH--------FIPIS------GPEIM 253
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q L EA ++APSI+ D +DSI + G + V+A L+D
Sbjct: 254 SKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTG-EVERRVVAQLLALMDG 312
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
++ G+ + +A+ + I +L GRFD +++ P RK ILE
Sbjct: 313 LEARGD----------VIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILE-- 360
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV 812
I R + ++++ L ++A +G+ DLE L A+ R L + I ++
Sbjct: 361 IHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVI 420
Query: 813 ------RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKF 866
R+DF +A+ P AMR++ E W+D+GGL + + E +E P K+
Sbjct: 421 ENLKVTREDFMEALKNIEPSAMREVL---VEVPNVKWEDIGGLEHAKQELMEAVEWPLKY 477
Query: 867 PNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAV 926
P +F A ++ +LL+GPPG GKT + A A + FISVKGPELL+K++G SE+ V
Sbjct: 478 PEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHV 537
Query: 927 RDIFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
R++F KA APC++FFDE DS+AP+RG ++ VT+RVV+Q LTELDG+E L V V A
Sbjct: 538 REMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIA 597
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKV 1023
AT+RPD++D ALLRPGRL+R ++ P + R++I K+
Sbjct: 598 ATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKI 635
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 113/186 (60%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GGL ++EMIELP K P +F + + VLLYGPPG GKT I A A
Sbjct: 181 YEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEV 240
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
FI + GPE+++KY G SEQ +R+IF +A AP ++F DE DSIAPKR V
Sbjct: 241 DAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER 300
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
RVV Q L +DG+E V V AAT+RPD +D AL RPGR DR + P R +IL+
Sbjct: 301 RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILE 360
Query: 1023 VISRKV 1028
+ +RK+
Sbjct: 361 IHTRKM 366
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 51/250 (20%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F ++ P IL+ GPPG+GKT LAKAVA ++ F+ KGP
Sbjct: 481 FRAANIKPPRGILLFGPPGTGKTLLAKAVANE--------SNANFISV------KGP--- 523
Query: 642 QALSNFISEALDH-----------APSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 690
+ LS ++ E+ H AP ++ FD +DS+ S + V++
Sbjct: 524 ELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTE 583
Query: 691 VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
+D ++E + + +A+ + I +L GR + H+ +P P R I
Sbjct: 584 LDGLEELKD----------VVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIF 633
Query: 751 EHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP 809
+I R +D++ + ++A K +GY D+E + A+ R L IKP
Sbjct: 634 --KIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAI-REL---------IKP 681
Query: 810 TLVRDDFSQA 819
+ R++ +A
Sbjct: 682 GMTREEAKEA 691
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 270 bits (690), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 170/457 (37%), Positives = 240/457 (52%), Gaps = 44/457 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L+HGPPG+GKT LAKAVA S S+ II
Sbjct: 215 FQKLGIEPPQGVLLHGPPGTGKTLLAKAVANE-------------TSASFFSIAGPEIIS 261
Query: 641 ------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIM 694
Q L +A D +PSI+ D LDSI D G + V+A ++D +
Sbjct: 262 KYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTG-EVERRVVAQLLTMMDGL 320
Query: 695 DEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI 754
+ G G + +A+ ++ + +L GRFD +++ P R+ IL+ I
Sbjct: 321 E----------GRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILK--I 368
Query: 755 QRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV- 812
R + SD++ L +A G+ D+E L A+ RYL E+ I P+L+
Sbjct: 369 HTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLID 428
Query: 813 -----RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFP 867
R+DF A+ E P AMR++ E + WDDVGGLT+ +N +KE +E P P
Sbjct: 429 RMIVKREDFKGALSEVEPSAMREVL---VELPKITWDDVGGLTEAKNNVKESVEWPLNQP 485
Query: 868 NIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVR 927
F + + + VLLYGPPG GKT + A A + FISV+GP+LL+K++G SE+A+R
Sbjct: 486 EKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIR 545
Query: 928 DIFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F KA AP ++FFDE DS+AP RG V++RVVNQ LTELDG+E + V V AA
Sbjct: 546 QTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAA 605
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKV 1023
T+RPD++D AL+R GR DRL+ P R ILK+
Sbjct: 606 TNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKI 642
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
Query: 838 GGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
GG ++D+GGL + ++EM+ELP K P IF + + VLL+GPPG GKT + A
Sbjct: 183 GGGITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKA 242
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
A S F S+ GPE+++KY G SEQ +R+IF A +P ++F DE DSIAPKR D
Sbjct: 243 VANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR-EDV 301
Query: 958 TG-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 1016
TG V RVV Q LT +DG+E V V AAT+R D +D AL RPGR DR + P
Sbjct: 302 TGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIG 361
Query: 1017 RLDILKVISR 1026
R +ILK+ +R
Sbjct: 362 REEILKIHTR 371
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 269 bits (688), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 245/449 (54%), Gaps = 26/449 (5%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEARLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q +EA PSI+ D LD++ EG+Q + L +MD G
Sbjct: 437 Q----IFAEATLRHPSIIFIDELDALCPKR---EGAQSEVEKRVVASLLT-LMDGIG--- 485
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-----DSSFEKHIKPTLVRDDF 816
+ LL +A+ GY DL+ L + A+ R L DS +K TL +DF
Sbjct: 545 TKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITL--NDF 602
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
Q M++ P AMR++ + + W D+GGL +I+ +K+ +E P K P F + ++
Sbjct: 603 LQGMNDIRPSAMREV---AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQ 659
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+IF KA A
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 937 APCLLFFDEFDSIAPKRGHDNTG--VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
AP ++FFDE D++A +RG + V DRV+ Q LTE+DG+E L V V AAT+RPD +D
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Query: 995 AALLRPGRLDRLLFCDFPSPRERLDILKV 1023
AL+RPGR+DR+++ P R +IL +
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATRREILNL 808
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 112/189 (59%), Gaps = 3/189 (1%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D +GGL AI+E+IELP K P +F + +LLYGPPG GKT I A A
Sbjct: 352 YDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEV 411
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR + V
Sbjct: 412 GAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEK 471
Query: 963 RVVNQFLTELDGV--EVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
RVV LT +DG+ E G V V AT+RP LDAAL RPGR D+ + P+ ++RLD
Sbjct: 472 RVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLD 531
Query: 1020 ILKVISRKV 1028
IL+ + R+V
Sbjct: 532 ILQKLLRRV 540
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639
/ JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3 SV=2
Length = 780
Score = 267 bits (683), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 253/465 (54%), Gaps = 48/465 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P IL++GPPG+GKT LA+A+A + + F+ + GP I
Sbjct: 238 FQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAY--------FITVN------GPEIM 283
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q + EA ++APSI+ D +D+I D G + V+A L+ +
Sbjct: 284 SKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTG-EVEKRVVAQ---LLTL 339
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
MD G K G G + + + + I +L GRFD +++ P RK IL+
Sbjct: 340 MD--GIK-----GRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQ-- 390
Query: 754 IQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDS-SFEKHIKPTL 811
+ R++ +D++ LD +A GY DL L A+ R++ + ++ P
Sbjct: 391 VHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAE 450
Query: 812 VRDDFSQAMHEFL-------PVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPS 864
+ + +M++FL P +R++ E + W+D+GGL +++ ++E +E P
Sbjct: 451 IIKELKVSMNDFLNALKSIQPSLLREVY---VEVPKVNWNDIGGLDNVKQQLREAVEWPL 507
Query: 865 KFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQ 924
+FP +F ++ + +LL+GPPG GKT + A A FI+V+GPE+L+K++G SE+
Sbjct: 508 RFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEK 567
Query: 925 AVRDIFSKATAAAPCLLFFDEFDSIAPKRG-HDNTGVTDRVVNQFLTELDGVEVLTGVFV 983
A+R+IF KA AAP ++FFDE DSIAP RG ++GVT+R+VNQ L E+DG+ L V +
Sbjct: 568 AIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVI 627
Query: 984 FAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKV 1028
AAT+RPD+LD ALLRPGR DRL++ P R +ILKV ++ V
Sbjct: 628 IAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNV 672
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 117/187 (62%), Gaps = 2/187 (1%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
W+D+G L + + I+E++E P + P +F + + +LLYGPPG GKT + A A
Sbjct: 211 WEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEI 270
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG-VT 961
FI+V GPE+++K+ G SEQ +R+IF +A AP ++F DE D+IAPKR D TG V
Sbjct: 271 GAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKR-EDVTGEVE 329
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV Q LT +DG++ V V AT+RPD +D AL RPGR DR + P + R DIL
Sbjct: 330 KRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDIL 389
Query: 1022 KVISRKV 1028
+V +R +
Sbjct: 390 QVHTRNM 396
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 35/257 (13%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F+ + P IL+ GPPG+GKT LAKAVA E + +A S+ E IR
Sbjct: 513 FTKSGVTPPKGILLFGPPGTGKTMLAKAVA--TESGANFIAVRGPEILSKWVGESEKAIR 570
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+ +A AP+++ FD +DSI S + ++ + L + MD
Sbjct: 571 E----IFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIV--NQLLAE-MD------ 617
Query: 702 KSSCGIGP---IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRS 758
GI P + +A+ + + +L GRFD + +P P + R IL+ +
Sbjct: 618 ----GIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVP 673
Query: 759 LECSDEILLDVASKCDGYDAYDLEILV-DRTVHAAVGRYLHSDSS-----------FEKH 806
L D L D+A K +GY DLE LV + T++A Y D ++KH
Sbjct: 674 L-AEDVSLEDIAEKAEGYTGADLEALVREATINAMRSIYSMCDKQSRDECKGNMECYQKH 732
Query: 807 IKPTLVRDDFSQAMHEF 823
IK + + F + +F
Sbjct: 733 IKECMNKTSFKVSKEDF 749
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 241/447 (53%), Gaps = 22/447 (4%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEAKLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q +EA PSI+ D LD++ EG+Q + L +MD G
Sbjct: 437 Q----IFAEATLRHPSIIFIDELDALCPKR---EGAQNEVEKRVVASLLT-LMDGIG--- 485
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR---DDFSQ 818
++ LL +A+ GY DL++L + A+ R L + LV+ DF Q
Sbjct: 545 TEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKITLKDFLQ 604
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
AM++ P AMR+I + + W D+GGL I+ +++ +E P K P F + ++
Sbjct: 605 AMNDIRPSAMREI---AIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPP 661
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+ F KA A AP
Sbjct: 662 KGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAP 721
Query: 939 CLLFFDEFDSIAPKRGHD--NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 996
++FFDE D++A +RG V DRV+ Q LTE+DG+E L V + AAT+RPD +D A
Sbjct: 722 SIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKA 781
Query: 997 LLRPGRLDRLLFCDFPSPRERLDILKV 1023
L+RPGR+DR+++ P R +I K+
Sbjct: 782 LMRPGRIDRIIYVPLPDAATRREIFKL 808
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D +GGL+ AI+E+IELP K P +F + VLLYGPPG GKT I A A
Sbjct: 352 YDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEV 411
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR V
Sbjct: 412 GAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEK 471
Query: 963 RVVNQFLTELDGV--EVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
RVV LT +DG+ EV G V V AT+RP LDAAL RPGR D+ + P+ ++RLD
Sbjct: 472 RVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLD 531
Query: 1020 ILKVISRKV 1028
IL+ + R+V
Sbjct: 532 ILQKLLRRV 540
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 250 bits (638), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 246/456 (53%), Gaps = 32/456 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P ++ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
SD++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 SDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ + VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
++D A+LRPGRLD+L++ P + R+ ILK RK
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRK 663
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL 381
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 382 QIHTKNM 388
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 252/452 (55%), Gaps = 34/452 (7%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L++GP G GK +L VAK + H+ V C +L + N + +A
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMG------IHVYEVDCYKLYDFVESKKDWNIRNVLEQAS 723
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIG--PI 710
+ P+++I N + + ++ + + ++ L++ L++I+ + + S+ P+
Sbjct: 724 NSTPTLLILKNFEVLEQTAQSMQQEKKESN---LSQTLINILKDINDSNTSNINSNKYPL 780
Query: 711 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDV 769
+ S++++ + F + L +P ++R IL++ + ++ + + + ++
Sbjct: 781 IITVTVNSMDELSNKV--RNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNL 838
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT--------LVRDDFSQAMH 821
+ + + +L L+ R+ A+ R L IKP ++ DD +++
Sbjct: 839 SIRTASFLNSNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLS 898
Query: 822 EFLPVAMRDITKTSAEGGR---SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
E M++ +S + WDDVGGL ++++ I + I+LP + P++FA + R
Sbjct: 899 E-----MQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASG-IGKR 952
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S +LL+GPPG GKT + A A CSL F+SVKGPEL+N YIG SE+ +R+IF+KA A P
Sbjct: 953 SGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKP 1012
Query: 939 CLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 996
C++FFDE DS+AP RG+ D+ GV DRVV+Q L ELDG++ + VF+ AT+RPDLLD++
Sbjct: 1013 CVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSS 1072
Query: 997 LLRPGRLDRLLFCDFPSPRE-RLDILKVISRK 1027
L+RPGRLDRLL+ S +E + IL+ ++RK
Sbjct: 1073 LMRPGRLDRLLYLGISSEKENQFKILQALTRK 1104
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 245/456 (53%), Gaps = 32/456 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P ++ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
SD++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 SDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
++D A+LRPGRLD+L++ P + R+ ILK RK
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRK 663
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL 381
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 382 QIHTKNM 388
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1
SV=4
Length = 806
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 245/456 (53%), Gaps = 32/456 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
++D A+LRPGRLD+L++ P + R+ ILK RK
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 382 QIHTKNM 388
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1
SV=4
Length = 806
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 245/456 (53%), Gaps = 32/456 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
++D A+LRPGRLD+L++ P + R+ ILK RK
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 382 QIHTKNM 388
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp
PE=1 SV=3
Length = 806
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 245/456 (53%), Gaps = 32/456 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
++D A+LRPGRLD+L++ P + R+ ILK RK
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 382 QIHTKNM 388
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 245/456 (53%), Gaps = 32/456 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
++D A+LRPGRLD+L++ P + R+ ILK RK
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 382 QIHTKNM 388
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1
SV=1
Length = 806
Score = 248 bits (632), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 244/456 (53%), Gaps = 32/456 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
++D A+LRPGRLD+L++ P + R+ ILK RK
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRK 663
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 111/187 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 382 QIHTKNM 388
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 247 bits (630), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 245/456 (53%), Gaps = 32/456 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++++++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
++D A+LRPGRLD+L++ P + R+ ILK RK
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 382 QIHTKNM 388
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 244 bits (623), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/456 (34%), Positives = 239/456 (52%), Gaps = 32/456 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 227 FKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 284
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +D+I G + L+ +MD G K+
Sbjct: 285 KAFE----EAEKNSPAIIFIDEIDAIAPKRDKTHGEVERR----IVSQLLTLMD--GMKK 334
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S + +A+ I +L GRFD + + P A+ R +L I ++++
Sbjct: 335 SSH-----LIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLR--IHTKNMKL 387
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
D++ L+ +A++ G+ DL L + + D + + +L +
Sbjct: 388 HDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTME 447
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F AM + P A+R+ T E + W D+GGL ++ ++E+++ P + P+ F +
Sbjct: 448 NFRYAMTKSSPSALRE---TVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFG 504
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FISVKGPELL + G SE VRDIF KA
Sbjct: 505 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKAR 564
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
+AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 565 SAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPD 624
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
++D A+LRPGRLD+L++ P + R ILK RK
Sbjct: 625 IIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRK 660
Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 112/187 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P++F ++ +L+YGPPG GKT I A A
Sbjct: 199 GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE 258
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE D+IAPKR + V
Sbjct: 259 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVE 318
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ + + V AAT+RP+ +D AL R GR DR + P RL++L
Sbjct: 319 RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVL 378
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 379 RIHTKNM 385
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 96/239 (40%), Gaps = 34/239 (14%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 635
PD L F P G +L +GPPG GKT LAKA+A C +
Sbjct: 497 PDKFLKFGMQ--PSRG-VLFYGPPGCGKTLLAKAIANE--------------CQANFISV 539
Query: 636 KGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALT 687
KGP + + + +A AP ++ FD LDSI + G + +
Sbjct: 540 KGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVIN 599
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ L + MD G K+ + + + + I ++ GR D + +P P R+
Sbjct: 600 QILTE-MDGMGAKKN-------VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSRE 651
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
AIL+ + R+S + L +A G+ DL + R A+ + + ++ EK
Sbjct: 652 AILKANL-RKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKE 709
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 234/462 (50%), Gaps = 44/462 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 284
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 285 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERR----IVSQLLTLMD 336
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 337 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 387
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D S + I +
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 811 LV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 448 MAVSNEHFHTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 504
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG+ D G DRV+NQ LTE+DG+ VF+
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 624
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
AT+RPD++D+ALLRPGRLD+L++ P RL+I K RK
Sbjct: 625 ATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRK 666
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 385 RIHTKNM 391
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 243 bits (620), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 237/461 (51%), Gaps = 42/461 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFV-----CCSRLSLEK 636
F + P +L++GPPG+GKT +A+AVA F+ S+++ E
Sbjct: 240 FKAIGIKPPRGVLMYGPPGTGKTLMARAVANE-------TGAFFFLINGPEVMSKMAGES 292
Query: 637 GPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDE 696
+R+A EA +AP+I+ D +DSI + D + V++ L+ +MD
Sbjct: 293 ESNLRKAFE----EAEKNAPAIIFIDEIDSI-APKRDKTNGEVERRVVSQ---LLTLMD- 343
Query: 697 YGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQR 756
G K +S+ + +A+ I +L GRFD V + P A+ R +L I
Sbjct: 344 -GMKARSN-----VVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLR--IHT 395
Query: 757 RSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR-- 813
++++ +D++ L+ +A++ GY D+ L + + E I ++
Sbjct: 396 KNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSL 455
Query: 814 ----DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
D+F A+ P A+R+ T E WDDVGGL +I+ +KE +E P P+
Sbjct: 456 GVTMDNFRFALGNSNPSALRE---TVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQ 512
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
+ + L VL YGPPG GKT + A A S FISVKGPELL+ + G SE +RDI
Sbjct: 513 YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDI 572
Query: 930 FSKATAAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F KA AAAP ++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV A
Sbjct: 573 FDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGA 632
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
T+RPD +D A+LRPGRLD+L++ P RL IL RK
Sbjct: 633 TNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRK 673
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 111/187 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+EM+ELP + P +F ++ VL+YGPPG GKT + A A
Sbjct: 212 GYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANE 271
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 272 TGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVE 331
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P RL++L
Sbjct: 332 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVL 391
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 392 RIHTKNM 398
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 36/246 (14%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
+L PD ++ + L +L +GPPG+GKT LAKAVA + + F+
Sbjct: 507 VLHPDQ---YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSAN--------FISV--- 552
Query: 633 SLEKGPII--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVI 684
KGP + + + +A AP++V D LDSI + G S
Sbjct: 553 ---KGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDR 609
Query: 685 ALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAAS 744
+ + L + MD K+ + + + ++I ++ GR D + +P P +
Sbjct: 610 VVNQLLTE-MDGMNAKKN-------VFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDEN 661
Query: 745 ERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL--HSDSS 802
R +IL ++++ LE E L +A G+ DL +V R A+ + H
Sbjct: 662 ARLSILNAQLRKTPLEPGLE-LTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHE 720
Query: 803 FEKHIK 808
EK +K
Sbjct: 721 AEKEVK 726
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 243 bits (620), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 252/514 (49%), Gaps = 85/514 (16%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL+HGP G GKT LAKA+A L+ L A S +S E +R SN I+
Sbjct: 250 PRGILLHGPSGCGKTLLAKAIAGELKVP--LFAISATEITSGVSGESEARVRTLFSNAIA 307
Query: 650 EALDHAPSIVIFDNLDSII----SSSSDPE----------------------GSQPSTSV 683
+A P I+ D +D+I S+S D E ++P+
Sbjct: 308 QA----PCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQT 363
Query: 684 IALTKFLVDIMDEYGEKRKSSCGI-------------GPIAFVASAQSLEKIPQSLTSSG 730
+ DI++ + ++ G + + + E + +L G
Sbjct: 364 EQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGG 423
Query: 731 RFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVH 790
RFD + L P + R IL+ + LE + + ++A+ GY D+ +LV
Sbjct: 424 RFDKEICLGIPDQTARCKILKVITSKMRLENNFD-YEEIATLTPGYVGADINLLVKEAAT 482
Query: 791 AAVGRYLHSDSS---------------------------FEKHIKPTLVRD------DFS 817
+V R S+ + ++ ++P + DF
Sbjct: 483 NSVNRIFTSNLNGASSSSSSSSSSTTNINNIGLSTELLISKEPLEPEKLNSLYIEMIDFK 542
Query: 818 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+A+ + +P A R+ T WDDVG L+ ++ + I P ++P + +
Sbjct: 543 KALKKVVPAAKREGFATIP---NVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDS 599
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
+ VL+YGPPGCGKT + A A+ C FISVKGPELLNKY+G SE+AVR +F +A A++
Sbjct: 600 PAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASS 659
Query: 938 PCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
PC++FFDEFD++APKR T+RVVNQ LTE+DG+E + VF+ AAT+RPD++D
Sbjct: 660 PCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIID 719
Query: 995 AALLRPGRLDRLLFCDFPSPRERLDILKVISRKV 1028
AA+ RPGRLD++++ PSP ER +ILK ++ K+
Sbjct: 720 AAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKI 753
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 50/236 (21%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ ++GG+ I+E IE P P I++ + +LL+GP GCGKT + A A
Sbjct: 215 FSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGEL 274
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ ++ E+ + G SE VR +FS A A APC++F DE D+IAPKR + +
Sbjct: 275 KVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDMER 334
Query: 963 RVVNQFLTELDGVEVLTG------------------------------------------ 980
R+V+Q LT +D + L+
Sbjct: 335 RIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQQQQQQQDIIEVDSQATTTTTASNNNNKQQ 394
Query: 981 --------VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKV 1028
V V AT+RP+ LD AL GR D+ + P R ILKVI+ K+
Sbjct: 395 KNDFKKGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKM 450
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 39/251 (15%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------R 641
P +L++GPPG GKT LAKA+A + A+ + V KGP +
Sbjct: 600 PAGVLMYGPPGCGKTLLAKAIASECQ------ANFISV--------KGPELLNKYVGESE 645
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A+ A +P ++ FD D++ +G + + + L + MD G ++
Sbjct: 646 RAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTE-MD--GLEK 702
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S + +A+ + I ++ GR D V +P P+ ER IL+ + +
Sbjct: 703 RSE-----VFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIH- 756
Query: 762 SDEILLDVAS--KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP-TLVRDDFSQ 818
D L+ V + +C + DL +LV + A+ R ++S+ +P T+ +DF
Sbjct: 757 QDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFDNNST-----EPDTVTMEDFIF 811
Query: 819 AMHEFLPVAMR 829
A+ + P R
Sbjct: 812 ALSKIKPSVSR 822
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis
elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 243 bits (619), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 237/456 (51%), Gaps = 32/456 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 235 FKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKMSGESESNLR 292
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A + E ++P+I+ D +D+I G V L + +MD G K
Sbjct: 293 KAFA----ECEKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQL----LTLMD--GLKT 342
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 343 RAH-----VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 395
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+++ L+ VA++C G+ DL L + + D + + + +L +
Sbjct: 396 GEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTME 455
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F AM + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 456 NFRFAMGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 512
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 513 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 572
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 573 AAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPD 632
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
++D A+LRPGRLD+L++ P RL I K RK
Sbjct: 633 IIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK 668
Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 111/187 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 207 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE 266
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F++ +P +LF DE D+IAPKR + V
Sbjct: 267 TGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVE 326
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 327 KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 386
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 387 RIHTKNM 393
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 240 bits (612), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 230/462 (49%), Gaps = 44/462 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G V L + +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQL----LTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR--IH 388
Query: 756 RRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ SD++ L+ +A GY DL L + + D + + + +
Sbjct: 389 TKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNS 448
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVTNEHFQTALGTSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIG 625
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
AT+RPD++D ALLRPGRLD+L++ P R I K RK
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRK 667
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVL 385
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 386 RIHTKNM 392
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 239 bits (610), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 230/462 (49%), Gaps = 44/462 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERR----IVSQLLTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 388
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D + I +
Sbjct: 389 TKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNS 448
Query: 811 LV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ D F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVSNDHFQTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG+ D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
AT+RPD++D ALLRPGRLD+L++ P R I K RK
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRK 667
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 385
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 386 RIHTKNM 392
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 243/496 (48%), Gaps = 44/496 (8%)
Query: 546 TQGFDSNVSSLSWM---GTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSG 602
TQ FD S++++ G A R V L + F +++ P +L++GPPG+G
Sbjct: 266 TQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTG 325
Query: 603 KTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQALSNFISEALDH 654
KT + +AVA VF GP + L +A H
Sbjct: 326 KTMVMRAVAAEANAQ-------VFTI-------DGPSVVGKYLGETESRLRKIFEDARAH 371
Query: 655 APSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVA 714
PSI+ D +D++ ++ + S+ + +A L+D M G + +A
Sbjct: 372 QPSIIFIDEIDALAPKRTE-DVSEAESRAVATLLTLLDGM----------ANAGKVVVIA 420
Query: 715 SAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCD 774
+ I ++L GR + +++ P S R I++ + E +D L D+AS+
Sbjct: 421 ATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTH 480
Query: 775 GYDAYDLEILVDRTVHAAVGRY--LHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDIT 832
Y DL +V A+ R L D+S I + DD A+ AMR+
Sbjct: 481 AYVGADLAAVVREAALRAIKRTISLQKDTS-GLDIFGAVQMDDLEFALSSVRQSAMREFM 539
Query: 833 KTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKT 892
E W D+GG +++ +KE +E P F++ +R VLLYGPPGC KT
Sbjct: 540 ---MESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKT 596
Query: 893 HIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPK 952
A A L FI+VKGPEL +K++G SE+AVR +F KA A+P ++FFDE D++
Sbjct: 597 ITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTAN 656
Query: 953 RGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFP 1012
RG DN+ +DRVV L ELDG+E L V V AAT+RPD++D AL+RPGRLDRLL+ P
Sbjct: 657 RGEDNS--SDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPP 714
Query: 1013 SPRERLDILKVISRKV 1028
+ R I+K+ + K+
Sbjct: 715 NFEARKQIVKIQAEKM 730
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cdc48
PE=1 SV=2
Length = 823
Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 238/467 (50%), Gaps = 34/467 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 251 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 308
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +DSI G V L + +MD G K
Sbjct: 309 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 358
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 359 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILS--IHTKNMKL 411
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+++ L+ +A++ GY DL L + + + + + + +L +
Sbjct: 412 GEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTME 471
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R++ R W+D+GGL +++ + E ++ P P F +
Sbjct: 472 NFRYALGVSNPSALREVAVVEVPNVR--WEDIGGLEEVKRELIESVQYPVDHPEKFQKFG 529
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
L VL YGPPG GKT + A A C+ FISVKGPELL+ + G SE +RDIF KA
Sbjct: 530 LSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKAR 589
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAAPC++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV AT+RP+
Sbjct: 590 AAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPE 649
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKV---CDTSIPF 1035
LDAAL+RPGRLD L++ P R ILK RK D I F
Sbjct: 650 QLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEF 696
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 111/187 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 223 GYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 282
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 283 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 342
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P P RL+IL
Sbjct: 343 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL 402
Query: 1022 KVISRKV 1028
+ ++ +
Sbjct: 403 SIHTKNM 409
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 230/462 (49%), Gaps = 44/462 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G V L + +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQL----LTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLG--IH 388
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++E+ L+ SK GY DL L + + D + + + +
Sbjct: 389 TKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTIDAEVLNS 448
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVTNEHFQTALGTSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
AT+RPD++D ALLRPGRLD+L++ P R I K RK
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRK 667
Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 109/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVL 385
Query: 1022 KVISRKV 1028
+ ++ +
Sbjct: 386 GIHTKNM 392
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 241/455 (52%), Gaps = 31/455 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
+S + P IL++GPPG+GKT +A+A+A L+ + S+++ E +R
Sbjct: 234 YSKIGVKPPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIM--SKMAGESESNLR 291
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +D++ +G V L + +MD G K
Sbjct: 292 KAFE----EAEKNSPAIIFIDEIDALAPKREKSQGEVERRIVSQL----LTLMD--GMKA 341
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + + + I +L GRFD +++ P + R IL I ++++
Sbjct: 342 RSN-----VIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEILR--IHTKNMKM 394
Query: 762 SDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYL-HSDSSFEKHIKPTLVR-----D 814
S+++ L+ + + G+ DL L + L D EK L +
Sbjct: 395 SEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQIDLDSEKIDAKVLASLKVNSE 454
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P ++R+ T + W D+GGL ++ ++E ++ P ++P F +
Sbjct: 455 NFRYAIEHTDPSSLRE---TVIQSPNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFG 511
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL+ ++G SE +RD+F++A
Sbjct: 512 MTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARAR 571
Query: 935 AAAPCLLFFDEFDSIAPKR-GHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDL 992
AAPC+LFFDE DSIA R G+D ++G TDR++NQ L+E+DG+ VFV AT+RPD
Sbjct: 572 GAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQ 631
Query: 993 LDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
LD+AL+RPGRLD+L++ P R+ IL+ +K
Sbjct: 632 LDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKK 666
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 106/182 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG I+E++ELP + ++++ ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ GPE+++K G SE +R F +A +P ++F DE D++APKR V
Sbjct: 266 TGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKREKSQGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ + V V AT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 326 RRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEIL 385
Query: 1022 KV 1023
++
Sbjct: 386 RI 387
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 34/210 (16%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L +GPPG GKT LAKAVA C + KGP + +
Sbjct: 518 VLFYGPPGCGKTLLAKAVATE--------------CKANFISIKGPELLSMWVGESESNI 563
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ + A AP ++ FD +DSI + S +GS +T + L + L + MD +K+
Sbjct: 564 RDLFARARGAAPCVLFFDEIDSIAKARSGNDGSSGATDRM-LNQLLSE-MDGINQKKN-- 619
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + +++ +L GR D V +P P R +IL+ +++ L S E
Sbjct: 620 -----VFVIGATNRPDQLDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPL--SPE 672
Query: 765 I-LLDVASKCDGYDAYDLEILVDRTVHAAV 793
I L +A D + DL + R A+
Sbjct: 673 IDLRQLAEATDKFSGADLSEICQRACKLAI 702
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 233/488 (47%), Gaps = 61/488 (12%)
Query: 585 YHLPL--PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQ 642
+HL + P +L+HGPPG GKT LA A+A L+ VA V S +S E Q
Sbjct: 291 HHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQ 344
Query: 643 ALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRK 702
L +A+ +AP I+ D +D+I V L + D+ + R
Sbjct: 345 KLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR- 403
Query: 703 SSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECS 762
+ + + + + +L +GRFD + L P + R+ IL+ ++ L +
Sbjct: 404 -------VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQA 456
Query: 763 DEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH---------------- 806
+ +A G+ DL L AV R L +K
Sbjct: 457 FD-FCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEER 515
Query: 807 --IKPT------------LVRDD--FSQAMHEFLPVAMRD----ITKTSAEGGRSG---- 842
+PT L+RD S+ + L + + D ++ R G
Sbjct: 516 LGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTV 575
Query: 843 ----WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
W D+G L DI+ + I P + P+ F L + VLL GPPGCGKT + A
Sbjct: 576 PNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAV 635
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A L FISVKGPELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R T
Sbjct: 636 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 695
Query: 959 GVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
G + RVVNQ LTE+DG+E VF+ AAT+RPD++D A+LRPGRLD+ LF P P +RL
Sbjct: 696 GASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRL 755
Query: 1019 DILKVISR 1026
ILK I++
Sbjct: 756 AILKTITK 763
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 113/204 (55%), Gaps = 11/204 (5%)
Query: 843 WDDVGG--LTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
++DVGG +T ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 264 FEDVGGNDMT-LKEVCKMLIHM--RHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAG 320
Query: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 960
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 321 ELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDM 380
Query: 961 TDRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER 1017
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 381 ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASR 440
Query: 1018 LDILKVISRKVCDTSIPFSSLFCN 1041
IL+ + RK+ +P + FC+
Sbjct: 441 ERILQTLCRKL---RLPQAFDFCH 461
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 45/268 (16%)
Query: 535 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINR---IKVLLSPDSGLWFSTYHLPLPG 591
V+ +V+ +GF V +++W A + I + +L + F L P
Sbjct: 558 VALSSVQPSAKREGF-VTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPA 616
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQA 643
+L+ GPPG GKT LAKAVA + + F+ KGP + +A
Sbjct: 617 GVLLAGPPGCGKTLLAKAVANE--------SGLNFISV------KGPELLNMYVGESERA 662
Query: 644 LSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKS 703
+ A + AP ++ FD +D++ SD E SV + + L + MD +++
Sbjct: 663 VRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET---GASVRVVNQLLTE-MDGLEARQQ- 717
Query: 704 SCGIGPIAFVASAQSLEKIPQSLTSSGRFD--FHVQLPAPAASERKAILEHEIQRRSLEC 761
+ +A+ + I ++ GR D V LP PA +R AIL+ + +
Sbjct: 718 ------VFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRLAILKTITKNGTKPP 769
Query: 762 SD-EILLDVAS---KCDGYDAYDLEILV 785
D ++ L+ + +CD Y DL LV
Sbjct: 770 LDADVNLEAIAGDLRCDCYTGADLSALV 797
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 232/481 (48%), Gaps = 59/481 (12%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L+HGPPG GKT LA A+A L+ VA V S +S E Q L
Sbjct: 297 PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQKLRELFD 350
Query: 650 EALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP 709
+A+ +AP IV D +D+I V L + D+ + R
Sbjct: 351 QAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR-------- 402
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ + + + + +L +GRFD V L P + R+ IL+ ++ L + +
Sbjct: 403 VLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFN-FCHL 461
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLH----------------SDSSFEKHI--KPT- 810
A G+ DL L AV R L S+ E+ + +PT
Sbjct: 462 AHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKPEIEGLPSEGDQEERLGAEPTS 521
Query: 811 -----------LVRDD--FSQAMHEFLPVAMRDITKTSAE----GGRSG--------WDD 845
L+RD S+ + L + + D AE R G W D
Sbjct: 522 ETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWAD 581
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+G L DI++ + I P + P+ F L + +LL GPPGCGKT + A A L
Sbjct: 582 IGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLN 641
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 965
FISVKGPELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R TG + RVV
Sbjct: 642 FISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVV 701
Query: 966 NQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVIS 1025
NQ LTE+DG+E VF+ AAT+RPD++D A+LRPGRLD+ LF P P +R+ ILK I+
Sbjct: 702 NQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTIT 761
Query: 1026 R 1026
+
Sbjct: 762 K 762
Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 9/203 (4%)
Query: 843 WDDVGGL-TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
++DVGG ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 263 FEDVGGNDATLKEVCKMLIHM--RHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 321 LDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDME 380
Query: 962 DRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARE 440
Query: 1019 DILKVISRKVCDTSIPFSSLFCN 1041
IL+ + RK+ +P + FC+
Sbjct: 441 RILQTLCRKL---RLPETFNFCH 460
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 134/323 (41%), Gaps = 63/323 (19%)
Query: 535 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINR--IKVLLSP-DSGLWFSTYHLPLPG 591
V+ V+ +GF V +++W A + I I +L+P + F T L P
Sbjct: 557 VALAEVQPSAKREGF-VTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPA 615
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQA 643
IL+ GPPG GKT LAKAVA + + F+ KGP + +A
Sbjct: 616 GILLAGPPGCGKTLLAKAVANE--------SGLNFISV------KGPELLNMYVGESERA 661
Query: 644 LSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKS 703
+ A + AP ++ FD +D++ SD E SV + + L + MD +++
Sbjct: 662 VRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET---GASVRVVNQLLTE-MDGLETRQQ- 716
Query: 704 SCGIGPIAFVASAQSLEKIPQSLTSSGRFD--FHVQLPAPAASERKAILEHEIQRRSLEC 761
+ +A+ + I ++ GR D V LP PA +R AIL+ + +
Sbjct: 717 ------VFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRVAILKTITKNGTKPP 768
Query: 762 SDE-ILLDVAS---KCDGYDAYDLEILVDRTVHAAV-------------GRYLHSDSSFE 804
DE + L+ + +C+ Y DL LV A+ G S FE
Sbjct: 769 LDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFE 828
Query: 805 ---KHIKPTLVRDDFSQAMHEFL 824
K +KP++ D Q M+E L
Sbjct: 829 DAFKKVKPSISIKD--QVMYEAL 849
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 230 bits (587), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 233/463 (50%), Gaps = 45/463 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 284
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 285 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERR----IVSQLLTLMD 336
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 337 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 387
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D S + I +
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 448 MAVTNEHFHTALGNSNPSALRE---TVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPE 504
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKR----GHDNTGVTDRVVNQFLTELDGVEVLTGVFVF 984
IF KA +APC+LFFDE DSIA +R G D G DRV+NQ LTE+DG+ VF+
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFII 624
Query: 985 AATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
AT+RPD++D+ALLRPGRLD+L++ P RL+I K RK
Sbjct: 625 GATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRK 667
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 385 RIHTKNM 391
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 233/489 (47%), Gaps = 36/489 (7%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
+L+P+ F + P IL HGPPG GKT LA A+A A + F S
Sbjct: 253 ILNPEP---FKKIGVKPPSGILFHGPPGCGKTKLANAIANE--------AGVPFYKISAT 301
Query: 633 SLEKG--PIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 690
+ G + + S+A APSIV D +D+I S E Q +T+ L
Sbjct: 302 EVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAI---GSKRENQQREMEKRIVTQLL 358
Query: 691 --VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKA 748
+D G+K G + + + + + +L SGRF+ + L AP R
Sbjct: 359 TCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAE 418
Query: 749 ILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL---HSDSSFEK 805
IL Q+ LE + +A G+ DLE + A+ R L S+ S +
Sbjct: 419 ILSVVAQKLRLEGPFDKKR-IARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDG 477
Query: 806 HIKPTLVRDDFSQAMHEFLPVAMRDITKT----SAEGGRSG--------WDDVGGLTDIQ 853
+ +R + + E L V M D + A R G WDDVGGL ++
Sbjct: 478 EDDKSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLR 537
Query: 854 NAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPE 913
I P K P+I+ + L + LLYGPPGCGKT I AAA F+ +KG E
Sbjct: 538 LQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAE 597
Query: 914 LLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELD 973
LLNKY+G SE A+R +F +A APC++FFDE D++ RG + V +R++NQFL ELD
Sbjct: 598 LLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQFLVELD 657
Query: 974 GVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKV-CDTS 1032
G E V+V AT+RPD++D A LRPGR LL+ P+ ER ILK I+RK D S
Sbjct: 658 GGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPS 716
Query: 1033 IPFSSLFCN 1041
+ + N
Sbjct: 717 VDLDGIAKN 725
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 117/231 (50%), Gaps = 16/231 (6%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ D GG+ I + ++ + P P F + ++ S +L +GPPGCGKT + A A
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ F + E+++ GASE+ +R++FSKA AP ++F DE D+I KR + +
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK 351
Query: 963 RVVNQFLTELDG---------VEVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFP 1012
R+V Q LT +DG + G V V AT+RPD LD AL R GR + + P
Sbjct: 352 RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
Query: 1013 SPRERLDILKVISRKVCDTSIPFSSLFCNELLICKLWHFFMCVSLNLSSYI 1063
R +IL V+++K+ PF ++ I +L F+ L +Y+
Sbjct: 412 DEDARAEILSVVAQKL-RLEGPF-----DKKRIARLTPGFVGADLESVAYL 456
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 29/242 (11%)
Query: 570 IKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAK----SLEHHKDLVAHIV 625
++ + PD + + + L L++GPPG GKT +AKA A + H K
Sbjct: 545 VRPIKKPD---IYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNK 601
Query: 626 FVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA 685
+V S L A+ A AP ++ FD +D++ +S EG+ +
Sbjct: 602 YVGESEL----------AIRTLFQRARTCAPCVIFFDEVDALTTSRGK-EGAWVVERL-- 648
Query: 686 LTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASE 745
L +FLV++ + GE+R + + + + + + GRF + +P P A E
Sbjct: 649 LNQFLVEL--DGGERRN-------VYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADE 699
Query: 746 RKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK 805
R +IL+ +++ ++ S ++ + C+G+ DL LV + AV + S S E
Sbjct: 700 RASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSED 759
Query: 806 HI 807
+
Sbjct: 760 DV 761
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis
elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 234/457 (51%), Gaps = 33/457 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 236 FKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVM--SKMSGESESNLR 293
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A E + P+I+ D +D+I G V L + +MD G K
Sbjct: 294 KAFE----ECEKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQL----LTLMD--GVKG 343
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 344 RSN-----LVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 396
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ +A++C G+ DL L + + D + + +L +
Sbjct: 397 ADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTME 456
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 457 NFRFAQGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 573
Query: 935 AAAPCLLFFDEFDSI----APKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRP 990
AAAPC+LFFDE DSI G D G +DRV+NQ LTE+DG+ VF+ AT+RP
Sbjct: 574 AAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRP 633
Query: 991 DLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
D++D A+LRPGRLD+L++ P R ILK RK
Sbjct: 634 DIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRK 670
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 110/187 (58%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 208 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANE 267
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F + P +LF DE D+IAPKR N V
Sbjct: 268 TGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVE 327
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DGV+ + + V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 328 RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 387
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 388 RIHTKNM 394
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 30/222 (13%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L +GPPG GKT LAKA+A C + KGP + +
Sbjct: 520 VLFYGPPGCGKTLLAKAIANE--------------CQANFISIKGPELLTMWFGESEANV 565
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ +A AP ++ FD LDSI + G + + ++ MD K+
Sbjct: 566 RDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN-- 623
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + + I ++ GR D + +P P + R IL+ +++ L D
Sbjct: 624 -----VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPL-SKDL 677
Query: 765 ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
L +A G+ DL + R A+ + + EK
Sbjct: 678 DLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKE 719
>sp|Q13608|PEX6_HUMAN Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2
Length = 980
Score = 226 bits (577), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 252/493 (51%), Gaps = 53/493 (10%)
Query: 554 SSLSWMGTTA--SDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
SSLS G A S++ +K L P L T +L+ GPPG GKT++ VA
Sbjct: 431 SSLSPPGLEALVSELCAVLKPRLQPGGALLTGTSS------VLLRGPPGCGKTTV---VA 481
Query: 612 KSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSS 671
+ H L H++ V CS L E + L S A P++++ +D +
Sbjct: 482 AACSH---LGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLL---G 535
Query: 672 SDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGR 731
D +G V+A+ + L+ E +SC P+ VA+ + +P + ++
Sbjct: 536 RDRDGLGEDARVMAVLRHLL-----LNEDPLNSCP--PLMVVATTSRAQDLPADVQTA-- 586
Query: 732 FDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVH 790
F +++PA + +R +IL L E+ L +A +C G+ DL L+ +
Sbjct: 587 FPHELEVPALSEGQRLSILRALTAH--LPLGQEVNLAQLARRCAGFVVGDLYALLTHSSR 644
Query: 791 AAVGRYLHS---------DSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRS 841
AA R +S D L+ +DF QA+ + + A G
Sbjct: 645 AACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQL------QTAHSQAVGAPK 698
Query: 842 ----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
W DVGGL +++ I E I+LP + P + + RS +LL+GPPG GKT + A
Sbjct: 699 IPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLG--LRRSGLLLHGPPGTGKTLLAKA 756
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH-- 955
A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++FFDE DS+AP RG
Sbjct: 757 VATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 816
Query: 956 DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD ALLRPGR D+L+F R
Sbjct: 817 DSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDR 876
Query: 1016 -ERLDILKVISRK 1027
+L +L I+RK
Sbjct: 877 ASQLRVLSAITRK 889
>sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing protein C16E9.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16E9.10c PE=1 SV=1
Length = 779
Score = 226 bits (577), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 240/489 (49%), Gaps = 70/489 (14%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPI--IRQALSNF 647
P +L+HGPPG GKT LA A+A L + F+ S S+ G + +
Sbjct: 208 PRGVLLHGPPGCGKTMLANALANEL--------GVPFISISAPSIVSGMSGESEKKVREV 259
Query: 648 ISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGI 707
EA AP ++ D +D++ E +Q + +FL MDE ++
Sbjct: 260 FEEAKSLAPCLMFIDEIDAVTPKR---ESAQREMERRIVAQFLT-CMDELSFEKTDG--- 312
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
P+ + + + + +L +GRFD + L P+ R+ IL + L+ S +
Sbjct: 313 KPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILR--TMAKGLKLSGDFDF 370
Query: 767 LDVASKCDGYDAYDLE--------ILVDRTVH---------------------------- 790
+A + GY DL+ I + R +
Sbjct: 371 RQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNKLDLNSDPRFNELDSDMALDSN 430
Query: 791 --------AAVGRYL--HSDSSFEKHIKP-TLVRDDFSQAMHEFLPVAMRDITKTSAEGG 839
+ + RYL H D + ++P + DF +A+ + P + R+ T G
Sbjct: 431 DSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKREGFATVP--G 488
Query: 840 RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 899
S W+++G L I+ ++ I P K P ++ + + VLL+GPPGCGKT + A A
Sbjct: 489 VS-WNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVA 547
Query: 900 AACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 959
FIS++GPELLNKY+G SE+AVR +F +A A++PC++FFDE D++ P+R +
Sbjct: 548 NESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSE 607
Query: 960 VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
+ RVVN LTELDG+ +GV+V AAT+RPD++D A+LRPGRLD+ L D P ER++
Sbjct: 608 ASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVE 667
Query: 1020 ILKVISRKV 1028
ILK ++++
Sbjct: 668 ILKTLTKQT 676
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
D+GGL D N + E++ +P K P ++ + VLL+GPPGCGKT + A A +
Sbjct: 175 DIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGV 234
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV 964
FIS+ P +++ G SE+ VR++F +A + APCL+F DE D++ PKR + R+
Sbjct: 235 PFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRI 294
Query: 965 VNQFLTELDGV--EVLTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDI 1020
V QFLT +D + E G V V AT+RPD LD+AL R GR DR + PS R I
Sbjct: 295 VAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKI 354
Query: 1021 LKVISR 1026
L+ +++
Sbjct: 355 LRTMAK 360
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 128/313 (40%), Gaps = 35/313 (11%)
Query: 536 SFYTVKERGSTQGFDSNVSSLSW--MGTTASDVINRIKVLLSP-DSGLWFSTYHLPLPGH 592
+ V+ +GF + V +SW +G S + ++ P + + + P
Sbjct: 470 ALAKVQPSSKREGF-ATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTG 528
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPG GKT LAKAVA E + ++ ++ E +RQ F+ A
Sbjct: 529 VLLWGPPGCGKTLLAKAVAN--ESKANFISIRGPELLNKYVGESERAVRQV---FL-RAR 582
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
+P ++ FD LD+++ D S V L L + D G +
Sbjct: 583 ASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTLLTELDGLSDRSG-----------VYV 631
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV--- 769
+A+ + I ++ GR D + + P A ER IL+ ++ L +E+ LDV
Sbjct: 632 IAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLH--EEVNLDVLGR 689
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSD-SSFEKHI------KPTLVRD-DFSQAMH 821
+C + DL LV A+ + +D +S E I +P V + DF A
Sbjct: 690 DERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSALEPIRVTNADFELAFK 749
Query: 822 EFLP-VAMRDITK 833
P V+ RD K
Sbjct: 750 NIKPSVSDRDRQK 762
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 233/450 (51%), Gaps = 31/450 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 307
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +DSI G V L + +MD G K
Sbjct: 308 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 357
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 358 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILR--IHTKNMKL 410
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV------RD 814
+D++ L+ +A++ GY DL L + + E I ++ D
Sbjct: 411 ADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMD 470
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R+ T E W+D+GGL +++ ++E +++P + F +
Sbjct: 471 NFRFALGSSNPSALRE---TVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFG 527
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL +GPPG GKT + A A CS FISVKGPELL+ + G SE VRDIF KA
Sbjct: 528 VTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKAR 587
Query: 935 AAAPCLLFFDEFDSIAPKR--GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDL 992
AAAPC++F DE DSIA R ++G DRVVNQ LTE+DGV VFV AT+RPD
Sbjct: 588 AAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQ 647
Query: 993 LDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
+D AL+RPGRLD+L++ P R IL+
Sbjct: 648 IDPALMRPGRLDQLIYVPLPDEEARFSILQ 677
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 112/187 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 222 GYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 281
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 282 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 341
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P P RL+IL
Sbjct: 342 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEIL 401
Query: 1022 KVISRKV 1028
++ ++ +
Sbjct: 402 RIHTKNM 408
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 32/216 (14%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQAL 644
+L GPPG+GKT LAKA+A C + KGP + +
Sbjct: 534 VLFFGPPGTGKTLLAKAIANE--------------CSANFISVKGPELLSMWFGESESNV 579
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
+ +A AP +V D LDSI + + S + L+ MD K+
Sbjct: 580 RDIFDKARAAAPCVVFLDELDSIAKARG--ASAGDSGGGDRVVNQLLTEMDGVNSKKN-- 635
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
+ + + ++I +L GR D + +P P R +IL+ ++ R + D
Sbjct: 636 -----VFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQL-RHTPVAEDV 689
Query: 765 ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSD 800
L VA G+ DLE +V R V A+ + D
Sbjct: 690 DLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEED 725
>sp|Q99LC9|PEX6_MOUSE Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1
Length = 981
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 235/452 (51%), Gaps = 45/452 (9%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPGSGKT+ A L H++ V CS L + + L S A
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSRAVETKLQATFSRAR 520
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P++++ +D + D +G V A + L ++DE R P+
Sbjct: 521 RCRPAVLLLTAVDLL---GRDRDGLGEDARVAATLRHL--LLDEDALSR-----CPPLMV 570
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ ++ +P + ++ F +++P + ++R +IL+ L E+ L +A
Sbjct: 571 VATTSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQALTAH--LPLGQEVNLPQLAR 626
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP---------TLVRDDFSQAMHE 822
+C G+ DL L+ T AA R S S+ + L+ +DF QA+ +
Sbjct: 627 RCAGFVVGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQ 686
Query: 823 FLPVAMRDITKTSAEGGRS----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
+ A G W DVGGL D++ I E I+LP + P + + R
Sbjct: 687 L------QTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLG--LRR 738
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S +LL+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAP
Sbjct: 739 SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 798
Query: 939 CLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 996
C++FFDE DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD A
Sbjct: 799 CIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPA 858
Query: 997 LLRPGRLDRLLFCDFPSPR-ERLDILKVISRK 1027
LLRPGR D+L+F R +L +L I+RK
Sbjct: 859 LLRPGRFDKLVFVGASEDRASQLRVLSAITRK 890
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S VLL GPPG GKT V AA + L + V L A E ++ FS+A P
Sbjct: 465 SCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRP 524
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRV---VNQFLTELDGVEVLTGVFVFAATSR 989
+L D + R D G RV + L + D + + V A TSR
Sbjct: 525 AVLLLTAVDLLG--RDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSR 576
>sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6 PE=1
SV=1
Length = 941
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/479 (35%), Positives = 248/479 (51%), Gaps = 58/479 (12%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+HG PG GK ++ K VA+ L H+V C L AL+ + A
Sbjct: 380 VLLHGIPGCGKRTVVKYVARRLG------LHVVEFSCHSLLASSERKTSTALAQTFNMAR 433
Query: 653 DHAPSIV------IFDNLDSIISSSSDPEG-SQPSTSVI-ALTKFLVD---IMDEYGEKR 701
++P+I+ +F NL S S D G S SVI LT+ + + M+E
Sbjct: 434 RYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDSSMEEKSNSN 493
Query: 702 KSSCGIGP-----IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQR 756
S +G + +ASA+S E I ++ F +++ + +R +L +Q
Sbjct: 494 FSENEVGKFRGHQVLLIASAESTEGISPTIRRC--FSHEIRMGSLNDEQRSEMLSQSLQG 551
Query: 757 RSL---ECSDEILLDVASKCDGYDAYDLEILV-DRTVHAAV-----------------GR 795
S SDE + + + G+ DL+ LV D + + G
Sbjct: 552 VSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHGV 611
Query: 796 YLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSA-EGGRSGWDDVGGLTDIQN 854
+H S + + ++DF++A+ R+ + A + WDDVGGL D++
Sbjct: 612 DIHQASQIDNSTEKLTAKEDFTKALDR---SKKRNASALGAPKVPNVKWDDVGGLEDVKT 668
Query: 855 AIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPEL 914
+I + ++LP ++F+ LR RS VLLYGPPG GKT + A A CSL F+SVKGPEL
Sbjct: 669 SILDTVQLPLLHKDLFSSG-LRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 727
Query: 915 LNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRG--HDNTGVTDRVVNQFLTEL 972
+N YIG SE+ VRDIF KA +A PC++FFDE DS+AP RG D+ GV DRVV+Q L E+
Sbjct: 728 INMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI 787
Query: 973 DGV-EVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDF---PSPRERLDILKVISRK 1027
DG+ + +F+ A++RPDL+D ALLRPGR D+LL+ S RER +LK ++RK
Sbjct: 788 DGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRER--VLKALTRK 844
>sp|Q6FW67|PEX6_CANGA Peroxisomal biogenesis factor 6 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PEX6
PE=3 SV=1
Length = 1017
Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 240/458 (52%), Gaps = 55/458 (12%)
Query: 599 PGSGKTSLAKAVAKSLEHH---KDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHA 655
P GK S+ +++A L + D ++ + S ++ ++ L N +
Sbjct: 473 PKVGKASILRSIAIDLSYQFVDIDTLSVVFSSGSSDIATTFLGYLKGKLENLLPFT---G 529
Query: 656 PSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP-IAFVA 714
+I++ ++D I+ + Q S V AL L+ + Y I P + F
Sbjct: 530 NTIILIKHIDHILKKVDQNQDIQQSRQVKALEGDLISFIKSYSR-------IYPGVVFAF 582
Query: 715 SAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI-----------QRRSLECSD 763
++ S++ +P+ S +FD+ V P +R++I++ + ++ ++CS+
Sbjct: 583 TSASIDNLPEGFRSEIKFDYVVH--PPNEKQRRSIIDELLSTSDLFQKYGNRKLRIQCSN 640
Query: 764 EILLDVAS-KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL---------VR 813
EI + S G YD++ ++ V ++ + + + IK + VR
Sbjct: 641 EIEISTLSLHSAGLSPYDIQYIISLAVADSLRKCNNYLLWRQNKIKVDMISIQNALEKVR 700
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
D+S ++ ++ ++T WDDVGGL+ +++AI E I+LP K P +F
Sbjct: 701 SDYSASIGA---PSIPNVT----------WDDVGGLSSVKDAIMETIDLPLKHPELFGSG 747
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
L+ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F KA
Sbjct: 748 -LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKA 806
Query: 934 TAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVL-TGVFVFAATSRP 990
A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ GVF+ AT+RP
Sbjct: 807 RDAKPCVIFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRP 866
Query: 991 DLLDAALLRPGRLDRLLFCDFPSPRER-LDILKVISRK 1027
DLLD ALLRPGR D+L++ RE+ +I++ ++RK
Sbjct: 867 DLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRK 904
>sp|Q9HG03|PEX6_PENCH Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6
PE=3 SV=1
Length = 1459
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 195/345 (56%), Gaps = 37/345 (10%)
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
+A+ +E IP+ + S +F ++ AP ER+ IL++ + R + S ++ L +A
Sbjct: 886 IATTTDVETIPEGIRSLITHEF--EMGAPEEKEREGILQNAVTERGIRLSADVDLGSIAL 943
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT--LVRDDFSQAMHEFLPVAMR 829
K A DL +V+R A R L S + K I + VRD R
Sbjct: 944 KTAALVAGDLVDVVERAAGARTAR-LESLAEASKKISGSEVFVRDVLLAGGD-----GAR 997
Query: 830 DITKT----SAEGGRS--------------GWDDVGGLTDIQNAIKEMIELPSKFPNIFA 871
+TK + E R GWDDVGGLT++++A+ E I+LP + P +FA
Sbjct: 998 GVTKADFDAAVEAARKNFADSIGAPKIPNVGWDDVGGLTNVKDALVETIQLPLERPELFA 1057
Query: 872 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
+ ++ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F
Sbjct: 1058 KG-MKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQ 1116
Query: 932 KATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV----EVLTGVFVFA 985
+A A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ E GVFV
Sbjct: 1117 RARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIG 1176
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFP-SPRERLDILKVISRKVC 1029
AT+RPDLLD ALLRPGR D++L+ + R++ IL+ ++RK
Sbjct: 1177 ATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFA 1221
Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 650
IL +GPPG+GKT LAKA+A + F KGP + L+ +I E
Sbjct: 1066 ILFYGPPGTGKTLLAKAIATEFS--------LNFFSV------KGP---ELLNMYIGESE 1108
Query: 651 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
A D P +V FD LDS+ + +G +++ L ++ G +
Sbjct: 1109 ANVRRVFQRARDARPCVVFFDELDSVAPKRGN-QGDSGGVMDRIVSQLLAELDGMNGGEE 1167
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + + +L GRFD + L ++A + + R+
Sbjct: 1168 NS----GGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALH 1223
Query: 762 SDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGR 795
D L VA + Y DL L + A+ R
Sbjct: 1224 PDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITR 1258
>sp|Q9C1E9|PEX6_COLOR Peroxisomal biogenesis factor 6 OS=Colletotrichum orbiculare (strain
104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422)
GN=PEX6 PE=3 SV=1
Length = 1388
Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 193/337 (57%), Gaps = 27/337 (8%)
Query: 712 FVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-VA 770
VA+ ++K+P + G F +++ AP +ER+ IL ++ R + E+ L+ +A
Sbjct: 853 LVATTSDVDKVPDGV--RGLFSHELEVGAPDEAEREGILRTIVEDRGINLDPEVDLNGIA 910
Query: 771 SKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRD--DFSQAMHEFLPVAM 828
K A DL +VDR A V + L + K + VRD AM +
Sbjct: 911 LKTAALVAGDLVDVVDR---ALVAQRLRLEQISSKTGQAVTVRDLQVAGGAMARCVTKGD 967
Query: 829 RDITKTSAEGGRSG-----------WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
D+ +A +G WDDVGGL ++++A+ E I+LP + P +FA+ ++
Sbjct: 968 FDVAVEAARKNFAGAIGAPKIPNVTWDDVGGLNNVKDAVTETIQLPLERPELFAKG-MKK 1026
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F +A A
Sbjct: 1027 RSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAR 1086
Query: 938 PCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV----EVLTGVFVFAATSRPD 991
PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ + GVFV AT+RPD
Sbjct: 1087 PCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPD 1146
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRER-LDILKVISRK 1027
LLD ALLRPGR D++L+ ++ L IL+ ++RK
Sbjct: 1147 LLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRK 1183
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 33/152 (21%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 650
IL +GPPG+GKT LAKA+A + F KGP + L+ +I E
Sbjct: 1030 ILFYGPPGTGKTLLAKAIATEYS--------LNFFSV------KGP---ELLNMYIGESE 1072
Query: 651 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
A D P +V FD LDS+ P+ S + + + ++ E
Sbjct: 1073 ANVRRVFQRARDARPCVVFFDELDSVA-----PKRGNQGDSGGVMDRIVSQLLAELDGMS 1127
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFD 733
G + + + + + +L GRFD
Sbjct: 1128 GGDDTSGGVFVIGATNRPDLLDPALLRPGRFD 1159
>sp|P33760|PEX6_YEAST Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX6 PE=1 SV=1
Length = 1030
Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 244/467 (52%), Gaps = 50/467 (10%)
Query: 589 LPGHILIHGPPGS-GKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII---RQAL 644
L +L+H + GK ++ + +K L H + + SR II R
Sbjct: 474 LNASVLLHSTTNNVGKATMVRFASKYLGIHLLEIDCLSLTSNSRQLDSTSKIIGYIRAKC 533
Query: 645 SNFISEALDHAPSIVIFDNLDSI---ISSSSDPEGSQPSTSV-IALTKFLVDIMDEYGEK 700
N + A +P+++ +LDSI ++++ DPE + S+ ++K L D++ K
Sbjct: 534 ENVLPYA---SPAVIFLAHLDSILLDVNANQDPEAIKLQKSINFEMSKLL----DDFTFK 586
Query: 701 RKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILE-----HEIQ 755
+ FV S +++ +P S S RF+ + +P P+ ++R I + HE+
Sbjct: 587 FPGT------TFVGSVNNIDNVPSSFRSHMRFE--ILVPVPSEAQRLRIFQWYLSSHELN 638
Query: 756 RRSLECSDEILLD------VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP 809
R + +D ++S G D++ +V+ A R+ +
Sbjct: 639 RDVQQKVPVSYMDNISFSSLSSYSAGLTPLDIKSIVETARMTATARFYQESKKCGWLPQS 698
Query: 810 TLV-RDDFSQAM----HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPS 864
L+ ++D S+A +EF ++ + + WDD+GG+ ++ I + I++P
Sbjct: 699 ILITQEDLSKATSKARNEF------SVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPL 752
Query: 865 KFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQ 924
K P +F ++ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE
Sbjct: 753 KHPELFTSG-MKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEA 811
Query: 925 AVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEV-LTGV 981
VR +F KA A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ GV
Sbjct: 812 NVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGV 871
Query: 982 FVFAATSRPDLLDAALLRPGRLDRLLFCDFP-SPRERLDILKVISRK 1027
FV AT+RPDLLD ALLRPGR D+LL+ P + ++L+IL+ ++RK
Sbjct: 872 FVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRK 918
>sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=PEX6 PE=3 SV=1
Length = 1000
Score = 219 bits (559), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 158/504 (31%), Positives = 247/504 (49%), Gaps = 62/504 (12%)
Query: 552 NVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGP-PGSGKTSLAKAV 610
N+S L A R+K +L ++ + S ++ + I++H P GKT L ++V
Sbjct: 419 NLSPLFHYDEDAFPFAKRLKDIL--NTAIKCSARNVNVGTSIMLHSSSPNVGKTMLTRSV 476
Query: 611 AKSLEHHKDLVAHIVFVCCSRLSLEKGP---------IIRQALSNFISEALDHAPSIVIF 661
L H ++ V C L+ IR + IS + +VIF
Sbjct: 477 CAELGFH------LIHVDCLSLTSNSNTSDATNKTIGYIRAKIETIIS----YVEKVVIF 526
Query: 662 -DNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLE 720
+L++I+ + + + S + + D+++EY K K + FV S ++
Sbjct: 527 LSHLETILEDEQNQQDNTSSKMARQMNVEMADLIEEYTTKYKGTV------FVGSTNDID 580
Query: 721 KIPQSLTSSGRFDFHVQLPAPAASERKAILE----------HEIQRRSLECSDEILLDVA 770
IP + S R F + +P P +R + + RSL + L V+
Sbjct: 581 NIPAIVRS--RIKFEIDVPVPTEKQRLQMFRWYFDPYVLNSQTPKLRSLISHNVPLQTVS 638
Query: 771 SKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV---RDDFSQAMHEFLPVA 827
+ G D+ +V + R +D + ++ RD FS ++
Sbjct: 639 VQSAGLTPMDIRSIVKAVKYKCYQRLKQNDLLIDMTDITAVINIARDRFSDSI------- 691
Query: 828 MRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPP 887
+ + WDD+GG+ ++ I + I++P K P +F+ ++ RS +L YGPP
Sbjct: 692 ------GAPKIPNVTWDDIGGMDVVKGEIMDTIDMPLKHPELFSSG-MKKRSGILFYGPP 744
Query: 888 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFD 947
G GKT + A A+ SL F SVKGPELLN YIG SE VR +F KA A PC++FFDE D
Sbjct: 745 GTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELD 804
Query: 948 SIAPKRGH--DNTGVTDRVVNQFLTELDGVEV-LTGVFVFAATSRPDLLDAALLRPGRLD 1004
S+APKRG+ D+ GV DR+V+Q L ELDG+ GVFV AT+RPDLLD ALLRPGR D
Sbjct: 805 SVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFD 864
Query: 1005 RLLFCDFP-SPRERLDILKVISRK 1027
++L+ + +++ +I+K ++RK
Sbjct: 865 KMLYLGISDTDKKQANIIKALTRK 888
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 40/228 (17%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 650
IL +GPPG+GKT LAKA+A + + F KGP + L+ +I E
Sbjct: 738 ILFYGPPGTGKTLLAKAIASNFS--------LNFFSV------KGP---ELLNMYIGESE 780
Query: 651 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
A D P ++ FD LDS+ P+ S + + + ++ E
Sbjct: 781 ANVRRVFQKARDAKPCVIFFDELDSVA-----PKRGNQGDSGGVMDRIVSQLLAELDGM- 834
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRR-SLE 760
SS G G + + + + + ++L GRFD + L +++A + + R+ +LE
Sbjct: 835 -SSGGDG-VFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLE 892
Query: 761 CSDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGRYL-HSDSSFEKH 806
+I LD+A KC Y D L + A+ R D +EK+
Sbjct: 893 SGIDI-LDIAKKCPFNYTGADFYALCSDALLNAMTRVAGEVDEKWEKY 939
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 381,300,982
Number of Sequences: 539616
Number of extensions: 15901638
Number of successful extensions: 60113
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 827
Number of HSP's that attempted gapping in prelim test: 55266
Number of HSP's gapped (non-prelim): 4106
length of query: 1068
length of database: 191,569,459
effective HSP length: 128
effective length of query: 940
effective length of database: 122,498,611
effective search space: 115148694340
effective search space used: 115148694340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)