Query 001492
Match_columns 1067
No_of_seqs 748 out of 4752
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 02:11:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001492.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001492hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02468 sucrsPsyn_pln sucros 100.0 9E-206 2E-210 1866.9 89.3 1039 1-1061 1-1050(1050)
2 TIGR02470 sucr_synth sucrose s 100.0 3.6E-57 7.8E-62 547.9 44.3 458 163-669 253-745 (784)
3 PLN00142 sucrose synthase 100.0 7.7E-56 1.7E-60 535.8 37.7 462 163-669 277-768 (815)
4 TIGR02472 sucr_P_syn_N sucrose 100.0 2.2E-53 4.7E-58 504.2 42.9 438 166-670 1-439 (439)
5 PRK14501 putative bifunctional 100.0 3.9E-50 8.4E-55 501.2 42.0 591 268-1060 91-723 (726)
6 PLN03063 alpha,alpha-trehalose 100.0 4.8E-46 1E-50 462.7 47.1 549 289-1008 136-722 (797)
7 PLN03064 alpha,alpha-trehalose 100.0 4.2E-44 9E-49 441.0 42.4 547 289-1006 220-810 (934)
8 PLN02205 alpha,alpha-trehalose 100.0 4E-43 8.6E-48 435.8 42.8 566 288-1007 188-801 (854)
9 PLN02939 transferase, transfer 100.0 2.6E-40 5.7E-45 401.4 43.4 517 78-675 408-970 (977)
10 TIGR03449 mycothiol_MshA UDP-N 100.0 1.3E-39 2.7E-44 382.8 40.5 400 168-673 1-403 (405)
11 PRK00654 glgA glycogen synthas 100.0 1.7E-39 3.8E-44 387.9 36.3 436 166-674 1-465 (466)
12 PRK10307 putative glycosyl tra 100.0 2.3E-38 5E-43 373.1 41.2 399 166-675 1-411 (412)
13 PLN02316 synthase/transferase 100.0 2.4E-38 5.2E-43 391.7 41.0 424 163-673 585-1035(1036)
14 cd03800 GT1_Sucrose_synthase T 100.0 2.1E-38 4.6E-43 369.8 37.6 395 167-666 1-397 (398)
15 PLN02871 UDP-sulfoquinovose:DA 100.0 8E-38 1.7E-42 374.0 37.7 377 163-676 56-439 (465)
16 TIGR02095 glgA glycogen/starch 100.0 4.2E-38 9.2E-43 377.3 35.0 446 166-672 1-473 (473)
17 cd03796 GT1_PIG-A_like This fa 100.0 1.5E-37 3.3E-42 364.5 37.8 366 167-674 1-370 (398)
18 KOG0853 Glycosyltransferase [C 100.0 7.8E-41 1.7E-45 381.9 9.1 477 117-712 1-493 (495)
19 TIGR02149 glgA_Coryne glycogen 100.0 4.9E-37 1.1E-41 358.2 37.0 377 166-672 1-387 (388)
20 PRK14099 glycogen synthase; Pr 100.0 1E-36 2.2E-41 363.6 38.9 450 164-675 2-482 (485)
21 PRK14098 glycogen synthase; Pr 100.0 1.2E-36 2.5E-41 363.5 34.6 451 165-673 5-487 (489)
22 cd04962 GT1_like_5 This family 100.0 3.9E-35 8.4E-40 339.5 37.9 366 166-672 1-371 (371)
23 PRK15427 colanic acid biosynth 100.0 4.4E-35 9.5E-40 343.6 37.8 278 304-671 117-405 (406)
24 TIGR03088 stp2 sugar transfera 100.0 1.9E-34 4E-39 335.2 39.3 366 167-672 3-373 (374)
25 cd03791 GT1_Glycogen_synthase_ 100.0 3.5E-35 7.6E-40 352.7 33.6 444 167-670 1-475 (476)
26 cd03818 GT1_ExpC_like This fam 100.0 1.5E-34 3.4E-39 338.8 36.1 376 198-667 14-396 (396)
27 PRK15484 lipopolysaccharide 1, 100.0 7.5E-34 1.6E-38 330.9 38.5 369 167-672 4-378 (380)
28 cd03805 GT1_ALG2_like This fam 100.0 5.5E-34 1.2E-38 333.0 36.3 385 166-665 1-392 (392)
29 PRK15179 Vi polysaccharide bio 100.0 1.3E-33 2.9E-38 344.0 38.8 395 160-670 275-692 (694)
30 cd04955 GT1_like_6 This family 100.0 1.4E-32 3.1E-37 316.4 37.3 359 167-670 1-363 (363)
31 cd05844 GT1_like_7 Glycosyltra 100.0 4.6E-33 1E-37 321.7 31.9 278 304-667 81-366 (367)
32 PRK15490 Vi polysaccharide bio 100.0 2.3E-32 4.9E-37 318.5 35.7 291 304-671 279-575 (578)
33 cd03792 GT1_Trehalose_phosphor 100.0 4.7E-33 1E-37 323.5 29.1 284 304-671 84-371 (372)
34 cd03819 GT1_WavL_like This fam 100.0 5.4E-32 1.2E-36 310.9 36.3 342 190-660 9-354 (355)
35 cd03813 GT1_like_3 This family 100.0 4.5E-32 9.8E-37 324.9 34.9 293 304-670 172-475 (475)
36 cd03814 GT1_like_2 This family 100.0 7.9E-32 1.7E-36 308.6 35.2 362 167-670 1-364 (364)
37 cd03795 GT1_like_4 This family 100.0 9.5E-32 2.1E-36 308.6 35.8 352 167-662 1-357 (357)
38 cd03802 GT1_AviGT4_like This f 100.0 1.2E-31 2.6E-36 305.4 33.8 331 166-670 1-335 (335)
39 cd03816 GT1_ALG1_like This fam 100.0 2.5E-31 5.3E-36 313.3 37.0 379 191-661 14-406 (415)
40 cd03821 GT1_Bme6_like This fam 100.0 2.3E-31 5E-36 304.6 34.6 285 304-666 86-374 (375)
41 cd03794 GT1_wbuB_like This fam 100.0 3.2E-31 6.9E-36 304.7 35.7 385 167-666 1-394 (394)
42 KOG1111 N-acetylglucosaminyltr 100.0 1.3E-32 2.9E-37 294.7 22.0 367 166-676 1-371 (426)
43 PRK09922 UDP-D-galactose:(gluc 100.0 1.7E-31 3.6E-36 309.0 32.6 347 166-674 1-358 (359)
44 cd03817 GT1_UGDG_like This fam 100.0 7.2E-31 1.6E-35 300.8 36.7 371 167-671 1-373 (374)
45 PLN02846 digalactosyldiacylgly 100.0 9.2E-31 2E-35 305.0 36.8 379 164-672 3-392 (462)
46 cd03809 GT1_mtfB_like This fam 100.0 2.4E-31 5.2E-36 305.1 30.6 362 167-666 1-364 (365)
47 cd03799 GT1_amsK_like This is 100.0 7.9E-31 1.7E-35 300.7 34.7 268 304-664 78-354 (355)
48 cd03822 GT1_ecORF704_like This 100.0 1.1E-30 2.5E-35 299.6 35.8 356 167-670 1-366 (366)
49 PLN02949 transferase, transfer 100.0 1.7E-30 3.7E-35 307.2 37.5 408 160-674 28-459 (463)
50 cd03801 GT1_YqgM_like This fam 100.0 2.8E-30 6E-35 293.5 37.7 372 167-670 1-374 (374)
51 cd03812 GT1_CapH_like This fam 100.0 6E-31 1.3E-35 302.5 32.4 335 189-653 10-346 (358)
52 cd03807 GT1_WbnK_like This fam 100.0 2.8E-30 6E-35 294.5 37.4 351 190-670 11-365 (365)
53 PF05116 S6PP: Sucrose-6F-phos 100.0 3.7E-32 8E-37 296.3 20.9 244 779-1062 4-247 (247)
54 cd03820 GT1_amsD_like This fam 100.0 2.2E-30 4.7E-35 293.0 36.1 344 167-666 1-347 (348)
55 cd04951 GT1_WbdM_like This fam 100.0 4.1E-30 8.9E-35 295.4 38.2 345 190-670 11-359 (360)
56 PRK10125 putative glycosyl tra 100.0 8.7E-31 1.9E-35 306.5 32.7 367 166-672 1-405 (405)
57 cd03806 GT1_ALG11_like This fa 100.0 2.4E-30 5.2E-35 304.8 36.3 375 190-662 13-417 (419)
58 cd03825 GT1_wcfI_like This fam 100.0 1E-30 2.2E-35 300.9 31.8 345 166-672 1-365 (365)
59 TIGR03087 stp1 sugar transfera 100.0 9.2E-31 2E-35 307.0 31.0 284 304-671 103-396 (397)
60 cd03808 GT1_cap1E_like This fa 100.0 1.3E-29 2.9E-34 287.8 37.8 347 190-666 9-358 (359)
61 cd03823 GT1_ExpE7_like This fa 100.0 1.3E-29 2.8E-34 289.3 35.8 355 167-670 1-358 (359)
62 TIGR01485 SPP_plant-cyano sucr 100.0 1.1E-30 2.4E-35 286.3 25.7 243 779-1063 3-249 (249)
63 cd03798 GT1_wlbH_like This fam 100.0 2E-29 4.3E-34 287.7 35.9 283 304-672 92-377 (377)
64 PF00862 Sucrose_synth: Sucros 100.0 3E-32 6.6E-37 305.9 12.0 248 163-440 270-531 (550)
65 PLN02382 probable sucrose-phos 100.0 1.6E-30 3.6E-35 302.1 25.1 246 778-1063 10-262 (413)
66 PRK10976 putative hydrolase; P 100.0 2.6E-30 5.6E-35 286.5 21.3 245 779-1062 4-265 (266)
67 COG0561 Cof Predicted hydrolas 100.0 6.8E-30 1.5E-34 282.8 23.2 239 778-1063 4-263 (264)
68 PRK10513 sugar phosphate phosp 100.0 4.3E-30 9.3E-35 285.4 21.2 248 778-1061 4-268 (270)
69 PRK15126 thiamin pyrimidine py 100.0 4.3E-30 9.3E-35 285.6 21.2 241 779-1061 4-262 (272)
70 TIGR02471 sucr_syn_bact_C sucr 100.0 2.5E-29 5.5E-34 273.5 24.7 236 779-1062 1-236 (236)
71 TIGR02918 accessory Sec system 100.0 2.4E-28 5.3E-33 291.6 32.4 279 304-672 210-500 (500)
72 cd03811 GT1_WabH_like This fam 100.0 5.5E-28 1.2E-32 273.5 33.5 267 304-657 80-352 (353)
73 PLN02275 transferase, transfer 100.0 1.1E-27 2.3E-32 278.4 36.3 330 192-636 16-371 (371)
74 cd03804 GT1_wbaZ_like This fam 100.0 3.2E-28 7E-33 280.4 29.8 265 304-665 82-350 (351)
75 PLN02501 digalactosyldiacylgly 100.0 6.6E-28 1.4E-32 282.8 31.5 374 165-669 322-707 (794)
76 TIGR02400 trehalose_OtsA alpha 100.0 1.3E-28 2.9E-33 290.3 25.6 344 268-670 85-455 (456)
77 cd04946 GT1_AmsK_like This fam 100.0 3.6E-28 7.8E-33 285.7 28.8 276 304-666 126-406 (407)
78 cd03788 GT1_TPS Trehalose-6-Ph 100.0 8.9E-29 1.9E-33 294.0 22.6 353 251-669 67-459 (460)
79 cd03793 GT1_Glycogen_synthase_ 100.0 1.6E-27 3.4E-32 278.1 28.1 325 304-674 147-589 (590)
80 PLN02887 hydrolase family prot 100.0 1.9E-28 4.1E-33 292.6 20.3 249 776-1060 307-578 (580)
81 TIGR01482 SPP-subfamily Sucros 100.0 1.8E-28 3.9E-33 264.8 17.6 221 780-1061 1-225 (225)
82 PRK01158 phosphoglycolate phos 100.0 1.2E-27 2.5E-32 259.3 22.4 226 779-1062 5-230 (230)
83 PRK03669 mannosyl-3-phosphogly 100.0 4.4E-28 9.4E-33 269.2 18.8 244 779-1061 9-268 (271)
84 COG0297 GlgA Glycogen synthase 100.0 1.2E-26 2.6E-31 270.5 29.6 448 166-676 1-482 (487)
85 PF08282 Hydrolase_3: haloacid 100.0 8E-28 1.7E-32 262.8 16.9 234 780-1057 1-254 (254)
86 cd04949 GT1_gtfA_like This fam 99.9 3.8E-26 8.3E-31 265.1 29.2 273 304-665 98-372 (372)
87 PHA01630 putative group 1 glyc 99.9 2E-26 4.4E-31 262.0 26.1 255 311-671 52-330 (331)
88 PRK10530 pyridoxal phosphate ( 99.9 6.9E-27 1.5E-31 259.8 18.5 246 779-1061 5-271 (272)
89 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 1.4E-26 3E-31 255.1 20.3 241 779-1060 1-255 (256)
90 PRK00726 murG undecaprenyldiph 99.9 6.2E-25 1.4E-29 253.9 30.5 344 166-670 2-356 (357)
91 PHA01633 putative glycosyl tra 99.9 1.7E-24 3.7E-29 243.7 32.3 219 374-667 90-335 (335)
92 TIGR00099 Cof-subfamily Cof su 99.9 2.9E-26 6.2E-31 252.7 17.3 237 779-1057 1-256 (256)
93 TIGR02398 gluc_glyc_Psyn gluco 99.9 1.4E-25 2.9E-30 263.0 23.7 360 252-670 69-481 (487)
94 TIGR01487 SPP-like sucrose-pho 99.9 1.5E-25 3.2E-30 240.4 19.0 213 779-1057 3-215 (215)
95 cd03785 GT1_MurG MurG is an N- 99.9 5.5E-24 1.2E-28 245.0 30.7 331 189-663 8-349 (350)
96 TIGR01133 murG undecaprenyldip 99.9 8.9E-24 1.9E-28 243.0 29.1 327 190-663 10-346 (348)
97 PRK00192 mannosyl-3-phosphogly 99.9 7.8E-24 1.7E-28 235.4 20.8 249 779-1060 6-269 (273)
98 PRK10117 trehalose-6-phosphate 99.9 1.7E-23 3.6E-28 242.7 19.7 363 252-675 60-457 (474)
99 KOG1050 Trehalose-6-phosphate 99.9 1.3E-21 2.7E-26 236.8 35.1 525 306-1006 141-692 (732)
100 PRK05749 3-deoxy-D-manno-octul 99.9 2.1E-21 4.6E-26 229.9 30.6 284 304-674 123-422 (425)
101 PRK10187 trehalose-6-phosphate 99.9 3.9E-22 8.4E-27 220.1 20.4 198 779-1017 16-224 (266)
102 PRK13609 diacylglycerol glucos 99.9 1.8E-20 3.9E-25 218.7 30.8 263 304-672 103-372 (380)
103 TIGR02463 MPGP_rel mannosyl-3- 99.9 9.4E-22 2E-26 211.9 17.7 209 779-1013 1-221 (221)
104 PF00982 Glyco_transf_20: Glyc 99.9 5.2E-22 1.1E-26 233.6 16.8 322 289-670 130-473 (474)
105 PTZ00174 phosphomannomutase; P 99.9 1.3E-21 2.9E-26 214.1 18.9 211 778-1020 6-238 (247)
106 COG0380 OtsA Trehalose-6-phosp 99.9 7E-21 1.5E-25 219.5 24.5 313 306-671 148-479 (486)
107 PRK14502 bifunctional mannosyl 99.9 8.1E-21 1.8E-25 225.3 24.0 255 766-1060 407-689 (694)
108 PLN02605 monogalactosyldiacylg 99.9 1.2E-19 2.5E-24 211.9 31.7 264 304-669 99-379 (382)
109 cd04950 GT1_like_1 Glycosyltra 99.9 8.4E-20 1.8E-24 212.5 30.2 265 304-671 101-371 (373)
110 TIGR01484 HAD-SF-IIB HAD-super 99.9 5.4E-21 1.2E-25 203.3 15.3 199 779-1012 1-204 (204)
111 PRK13608 diacylglycerol glucos 99.8 7.8E-19 1.7E-23 205.5 31.1 266 304-676 103-376 (391)
112 PF00534 Glycos_transf_1: Glyc 99.8 1.1E-20 2.4E-25 194.8 13.1 162 475-652 10-172 (172)
113 PLN02423 phosphomannomutase 99.8 6.9E-19 1.5E-23 192.0 17.6 199 778-1015 8-233 (245)
114 TIGR02461 osmo_MPG_phos mannos 99.8 5.5E-19 1.2E-23 190.3 15.6 212 779-1013 1-225 (225)
115 KOG1387 Glycosyltransferase [C 99.8 1.7E-16 3.8E-21 169.8 28.6 391 190-675 56-462 (465)
116 cd01635 Glycosyltransferase_GT 99.8 3.8E-17 8.2E-22 174.2 22.0 119 485-620 109-229 (229)
117 PRK12702 mannosyl-3-phosphogly 99.8 3.9E-17 8.5E-22 176.6 21.5 251 779-1060 3-293 (302)
118 COG0438 RfaG Glycosyltransfera 99.8 3.9E-16 8.4E-21 175.2 30.2 289 306-674 84-379 (381)
119 TIGR00685 T6PP trehalose-phosp 99.7 8E-17 1.7E-21 176.1 19.0 221 775-1060 3-242 (244)
120 PLN02580 trehalose-phosphatase 99.7 1.1E-16 2.4E-21 181.4 20.2 202 779-1016 121-354 (384)
121 PLN03017 trehalose-phosphatase 99.7 2.1E-16 4.5E-21 177.6 20.4 201 778-1015 112-335 (366)
122 TIGR00236 wecB UDP-N-acetylglu 99.7 1.3E-16 2.8E-21 185.2 19.1 273 304-667 85-363 (365)
123 PRK09814 beta-1,6-galactofuran 99.7 2.9E-15 6.3E-20 171.6 28.2 238 304-657 62-317 (333)
124 TIGR02094 more_P_ylases alpha- 99.7 8.9E-16 1.9E-20 185.7 25.1 337 304-669 160-598 (601)
125 PRK00025 lpxB lipid-A-disaccha 99.7 7.8E-15 1.7E-19 171.2 27.1 172 473-672 179-374 (380)
126 KOG2941 Beta-1,4-mannosyltrans 99.7 1.5E-13 3.3E-18 147.8 32.5 380 196-660 28-430 (444)
127 cd03786 GT1_UDP-GlcNAc_2-Epime 99.6 6.4E-15 1.4E-19 170.6 21.8 251 304-646 87-345 (363)
128 PF05693 Glycogen_syn: Glycoge 99.6 2.3E-14 5.1E-19 166.9 24.0 328 305-676 143-586 (633)
129 PLN02151 trehalose-phosphatase 99.6 7.9E-15 1.7E-19 164.5 19.3 201 779-1015 100-321 (354)
130 COG1877 OtsB Trehalose-6-phosp 99.6 3.1E-14 6.8E-19 154.2 16.9 196 773-1007 16-218 (266)
131 TIGR03713 acc_sec_asp1 accesso 99.6 7.9E-14 1.7E-18 167.0 19.2 166 482-668 321-518 (519)
132 cd04299 GT1_Glycogen_Phosphory 99.6 6.5E-13 1.4E-17 163.5 26.9 336 304-670 247-688 (778)
133 PF02358 Trehalose_PPase: Treh 99.5 1.4E-14 3.1E-19 157.5 8.7 198 782-1016 2-219 (235)
134 PF13692 Glyco_trans_1_4: Glyc 99.4 1.6E-13 3.5E-18 135.5 6.0 131 480-638 2-135 (135)
135 PF13579 Glyco_trans_4_4: Glyc 99.3 4.5E-12 9.8E-17 127.5 10.3 160 191-430 1-160 (160)
136 PRK12446 undecaprenyldiphospho 99.3 1.9E-09 4E-14 124.5 31.8 327 190-669 11-349 (352)
137 PF13439 Glyco_transf_4: Glyco 99.3 2.2E-11 4.7E-16 124.8 14.0 169 188-437 9-177 (177)
138 TIGR00215 lpxB lipid-A-disacch 99.3 2.9E-10 6.3E-15 132.8 25.1 250 304-653 88-366 (385)
139 COG3769 Predicted hydrolase (H 99.3 7E-11 1.5E-15 120.1 14.5 257 775-1061 5-271 (274)
140 PF13524 Glyco_trans_1_2: Glyc 99.2 3.9E-11 8.4E-16 110.6 10.4 91 575-667 1-92 (92)
141 COG0707 MurG UDP-N-acetylgluco 99.2 1.2E-08 2.6E-13 116.8 31.3 327 190-663 10-349 (357)
142 TIGR02919 accessory Sec system 99.1 6.9E-09 1.5E-13 122.0 23.7 139 496-657 291-430 (438)
143 PF09314 DUF1972: Domain of un 99.1 8.3E-09 1.8E-13 106.3 18.1 180 167-432 3-185 (185)
144 cd03784 GT1_Gtf_like This fami 99.0 9.3E-08 2E-12 112.6 25.1 127 478-639 238-373 (401)
145 PF08323 Glyco_transf_5: Starc 98.9 9.3E-10 2E-14 120.4 6.5 211 167-395 1-234 (245)
146 TIGR01426 MGT glycosyltransfer 98.8 2E-06 4.3E-11 101.1 30.3 110 548-668 274-389 (392)
147 TIGR02726 phenyl_P_delta pheny 98.8 1.2E-08 2.5E-13 104.7 10.0 69 968-1057 82-150 (169)
148 TIGR01670 YrbI-phosphatas 3-de 98.8 1.1E-08 2.4E-13 103.8 9.1 74 968-1062 76-150 (154)
149 COG1519 KdtA 3-deoxy-D-manno-o 98.8 4.4E-06 9.6E-11 94.8 30.1 263 304-654 122-402 (419)
150 TIGR03492 conserved hypothetic 98.8 2E-06 4.2E-11 101.0 27.9 151 490-665 218-392 (396)
151 PRK09484 3-deoxy-D-manno-octul 98.8 1.4E-08 2.9E-13 106.2 8.2 69 969-1058 97-165 (183)
152 PRK11133 serB phosphoserine ph 98.7 1.3E-08 2.7E-13 115.3 6.6 71 966-1058 246-316 (322)
153 TIGR00661 MJ1255 conserved hyp 98.7 4.6E-06 9.9E-11 95.3 24.8 112 493-639 198-315 (321)
154 PF13528 Glyco_trans_1_3: Glyc 98.7 3.3E-06 7.3E-11 96.0 23.5 117 479-635 192-317 (318)
155 KOG3742 Glycogen synthase [Car 98.6 2.3E-07 4.9E-12 103.2 10.3 322 307-675 176-616 (692)
156 PF13477 Glyco_trans_4_2: Glyc 98.5 1.1E-06 2.5E-11 87.0 13.6 128 194-384 10-139 (139)
157 TIGR03568 NeuC_NnaA UDP-N-acet 98.5 1.2E-05 2.6E-10 93.5 22.7 263 304-667 92-363 (365)
158 smart00775 LNS2 LNS2 domain. T 98.5 2.6E-07 5.5E-12 93.9 7.4 69 780-856 2-89 (157)
159 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.4 1.8E-06 4E-11 94.8 11.8 71 779-856 3-76 (249)
160 TIGR03590 PseG pseudaminic aci 98.3 3.4E-05 7.5E-10 86.2 20.9 98 480-604 171-268 (279)
161 cd01427 HAD_like Haloacid deha 98.3 1.5E-06 3.2E-11 84.8 7.7 54 780-838 2-63 (139)
162 KOG3189 Phosphomannomutase [Li 98.3 1.4E-05 3.1E-10 80.7 13.8 198 776-1004 12-227 (252)
163 PF04007 DUF354: Protein of un 98.3 0.00025 5.4E-09 80.7 25.7 66 561-637 241-309 (335)
164 COG0560 SerB Phosphoserine pho 98.1 1.4E-05 3E-10 85.4 11.3 62 959-1027 135-196 (212)
165 PLN02448 UDP-glycosyltransfera 98.1 0.0012 2.6E-08 79.2 27.8 94 549-651 323-429 (459)
166 PF02350 Epimerase_2: UDP-N-ac 98.1 4.9E-05 1.1E-09 87.6 14.5 251 304-644 66-324 (346)
167 PHA03392 egt ecdysteroid UDP-g 98.1 0.003 6.5E-08 76.6 30.3 164 470-669 286-464 (507)
168 PF13844 Glyco_transf_41: Glyc 98.0 4.8E-05 1E-09 89.3 13.0 185 468-672 273-467 (468)
169 COG4641 Uncharacterized protei 98.0 0.0015 3.3E-08 73.5 23.9 124 546-675 234-365 (373)
170 TIGR01684 viral_ppase viral ph 98.0 2E-05 4.4E-10 86.2 8.3 70 779-855 128-200 (301)
171 TIGR01689 EcbF-BcbF capsule bi 98.0 2.2E-05 4.7E-10 76.2 7.6 56 779-839 3-79 (126)
172 COG0381 WecB UDP-N-acetylgluco 97.9 0.0008 1.7E-08 76.3 20.8 274 304-671 91-370 (383)
173 PRK10444 UMP phosphatase; Prov 97.9 0.00028 6.1E-09 77.4 15.3 65 779-850 3-70 (248)
174 PLN02208 glycosyltransferase f 97.8 0.028 6E-07 67.0 32.4 94 550-652 312-416 (442)
175 COG1819 Glycosyl transferases, 97.8 0.002 4.4E-08 75.8 21.9 94 546-650 281-380 (406)
176 COG3914 Spy Predicted O-linked 97.7 0.0063 1.4E-07 71.6 23.5 179 475-674 425-616 (620)
177 PF03332 PMM: Eukaryotic phosp 97.7 9.5E-05 2.1E-09 77.5 7.2 186 800-1015 2-208 (220)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.6 0.00017 3.7E-09 79.7 9.3 66 779-850 3-74 (257)
179 PHA03398 viral phosphatase sup 97.6 0.00014 3E-09 79.8 8.3 70 779-855 130-202 (303)
180 TIGR01452 PGP_euk phosphoglyco 97.6 0.00044 9.5E-09 77.4 12.2 65 779-850 4-71 (279)
181 PLN03007 UDP-glucosyltransfera 97.5 0.31 6.7E-06 59.0 36.3 140 479-639 285-441 (482)
182 PLN02562 UDP-glycosyltransfera 97.5 0.11 2.4E-06 62.2 30.7 139 479-644 273-419 (448)
183 PLN02410 UDP-glucoronosyl/UDP- 97.5 0.26 5.7E-06 59.0 33.6 92 549-650 324-421 (451)
184 PLN02670 transferase, transfer 97.5 0.23 5E-06 59.6 33.1 112 551-672 341-466 (472)
185 PLN02992 coniferyl-alcohol glu 97.4 0.33 7.1E-06 58.4 33.7 81 550-639 339-428 (481)
186 COG4671 Predicted glycosyl tra 97.4 0.055 1.2E-06 60.4 24.0 339 164-639 8-366 (400)
187 PLN00414 glycosyltransferase f 97.3 0.49 1.1E-05 56.6 33.5 94 551-653 314-418 (446)
188 PLN02173 UDP-glucosyl transfer 97.3 0.67 1.5E-05 55.4 34.9 93 549-651 317-420 (449)
189 PRK10017 colanic acid biosynth 97.3 0.54 1.2E-05 55.8 33.4 90 554-652 313-406 (426)
190 PLN02863 UDP-glucoronosyl/UDP- 97.2 0.85 1.8E-05 55.1 34.2 137 479-637 283-432 (477)
191 PF11997 DUF3492: Domain of un 97.2 0.011 2.5E-07 65.4 16.8 85 305-391 172-260 (268)
192 PF02684 LpxB: Lipid-A-disacch 97.2 0.042 9E-07 63.7 21.4 145 476-644 180-346 (373)
193 PLN00164 glucosyltransferase; 97.1 0.79 1.7E-05 55.4 33.1 93 551-652 341-446 (480)
194 PLN02764 glycosyltransferase f 97.1 0.68 1.5E-05 55.3 31.8 93 551-652 319-422 (453)
195 PF12000 Glyco_trans_4_3: Gkyc 97.1 0.0041 8.8E-08 63.8 11.2 149 251-436 19-170 (171)
196 PLN02554 UDP-glycosyltransfera 97.1 1.2 2.5E-05 54.1 34.2 86 549-643 342-446 (481)
197 COG1817 Uncharacterized protei 97.0 0.21 4.5E-06 55.1 23.5 136 470-640 172-316 (346)
198 COG1778 Low specificity phosph 97.0 0.00032 6.9E-09 69.0 1.7 54 968-1027 83-136 (170)
199 PF08550 DUF1752: Fungal prote 96.9 0.00042 9.2E-09 48.8 1.3 24 66-89 6-29 (29)
200 COG3660 Predicted nucleoside-d 96.9 0.19 4.2E-06 53.9 21.2 200 304-606 69-275 (329)
201 COG0763 LpxB Lipid A disacchar 96.8 0.062 1.4E-06 61.2 18.3 153 472-648 180-354 (381)
202 COG3980 spsG Spore coat polysa 96.8 0.027 5.9E-07 61.0 14.4 140 478-648 157-303 (318)
203 PRK02797 4-alpha-L-fucosyltran 96.8 0.31 6.7E-06 54.2 22.8 169 480-674 145-319 (322)
204 PLN02645 phosphoglycolate phos 96.7 0.0041 8.9E-08 70.8 8.6 65 779-850 30-97 (311)
205 PLN02210 UDP-glucosyl transfer 96.7 1.8 4E-05 51.9 31.0 82 550-640 325-417 (456)
206 TIGR01106 ATPase-IIC_X-K sodiu 96.7 0.013 2.9E-07 76.8 13.9 40 794-838 568-607 (997)
207 PLN02555 limonoid glucosyltran 96.7 1.1 2.5E-05 53.9 29.1 94 549-652 337-442 (480)
208 TIGR01460 HAD-SF-IIA Haloacid 96.7 0.014 3.1E-07 63.5 11.9 66 781-853 2-71 (236)
209 TIGR01681 HAD-SF-IIIC HAD-supe 96.6 0.0042 9.1E-08 60.9 6.1 54 779-837 2-68 (128)
210 PRK01021 lpxB lipid-A-disaccha 96.4 0.37 7.9E-06 58.7 22.4 152 472-651 405-584 (608)
211 PRK13223 phosphoglycolate phos 96.4 0.02 4.3E-07 63.9 11.2 51 963-1016 153-204 (272)
212 TIGR01116 ATPase-IIA1_Ca sarco 96.4 0.017 3.6E-07 75.3 12.0 41 794-839 537-577 (917)
213 TIGR01497 kdpB K+-transporting 96.4 0.022 4.8E-07 70.7 12.4 56 776-838 427-485 (675)
214 TIGR01647 ATPase-IIIA_H plasma 96.4 0.028 6.1E-07 71.6 13.4 59 776-839 418-482 (755)
215 TIGR01517 ATPase-IIB_Ca plasma 96.4 0.031 6.7E-07 73.1 14.0 41 794-839 579-619 (941)
216 PF07429 Glyco_transf_56: 4-al 96.3 0.35 7.6E-06 54.5 19.9 143 480-637 184-332 (360)
217 COG0058 GlgP Glucan phosphoryl 96.3 0.042 9.2E-07 67.7 13.8 140 476-621 483-629 (750)
218 PRK14986 glycogen phosphorylas 96.3 0.008 1.7E-07 74.7 7.8 148 475-631 538-703 (815)
219 PF06258 Mito_fiss_Elm1: Mitoc 96.3 0.064 1.4E-06 60.8 14.3 112 476-606 143-259 (311)
220 PLN03015 UDP-glucosyl transfer 96.3 3.5 7.5E-05 49.6 29.3 92 551-651 337-440 (470)
221 COG0647 NagD Predicted sugar p 96.3 0.096 2.1E-06 57.8 15.0 200 780-1016 11-238 (269)
222 TIGR01524 ATPase-IIIB_Mg magne 96.2 0.052 1.1E-06 70.2 15.0 41 794-839 515-555 (867)
223 TIGR01522 ATPase-IIA2_Ca golgi 96.1 0.071 1.5E-06 69.3 15.7 59 776-839 504-568 (884)
224 PRK15122 magnesium-transportin 96.1 0.054 1.2E-06 70.3 14.0 41 794-839 550-590 (903)
225 PRK10671 copA copper exporting 96.1 0.017 3.6E-07 74.7 9.4 97 935-1058 655-765 (834)
226 TIGR01523 ATPase-IID_K-Na pota 96.1 0.034 7.4E-07 73.1 12.1 41 794-839 646-686 (1053)
227 PLN02167 UDP-glycosyltransfera 96.0 5.3 0.00012 48.3 34.9 140 479-639 280-435 (475)
228 PRK10517 magnesium-transportin 96.0 0.062 1.3E-06 69.7 14.0 41 794-839 550-590 (902)
229 PF08288 PIGA: PIGA (GPI ancho 96.0 0.023 4.9E-07 50.8 6.7 72 250-339 13-86 (90)
230 TIGR01662 HAD-SF-IIIA HAD-supe 96.0 0.012 2.6E-07 57.8 5.7 57 776-839 1-73 (132)
231 PRK13226 phosphoglycolate phos 95.9 0.019 4.1E-07 62.3 7.5 40 969-1011 153-192 (229)
232 PLN02152 indole-3-acetate beta 95.8 6.5 0.00014 47.2 29.0 145 479-639 261-418 (455)
233 TIGR01664 DNA-3'-Pase DNA 3'-p 95.7 0.021 4.6E-07 58.7 6.4 66 775-850 13-102 (166)
234 PF13344 Hydrolase_6: Haloacid 95.7 0.015 3.2E-07 54.6 4.7 61 781-848 2-65 (101)
235 TIGR01657 P-ATPase-V P-type AT 95.4 0.067 1.5E-06 70.8 11.3 41 794-839 656-696 (1054)
236 PRK01122 potassium-transportin 95.4 0.11 2.3E-06 64.8 12.1 40 794-838 445-484 (679)
237 COG0474 MgtA Cation transport 95.2 0.12 2.5E-06 67.4 12.3 40 795-839 548-587 (917)
238 PLN02534 UDP-glycosyltransfera 95.2 10 0.00022 46.0 34.2 92 549-651 344-458 (491)
239 TIGR01672 AphA HAD superfamily 95.2 0.051 1.1E-06 59.1 7.6 36 799-839 119-158 (237)
240 PRK13225 phosphoglycolate phos 95.1 0.23 5E-06 55.4 12.8 41 968-1011 196-236 (273)
241 PF04464 Glyphos_transf: CDP-G 95.1 2 4.3E-05 50.1 21.2 110 546-669 249-367 (369)
242 cd04300 GT1_Glycogen_Phosphory 95.0 0.11 2.4E-06 65.0 10.6 148 476-630 526-689 (797)
243 TIGR01491 HAD-SF-IB-PSPlk HAD- 94.9 0.022 4.9E-07 59.9 3.8 47 967-1016 146-192 (201)
244 PRK10826 2-deoxyglucose-6-phos 94.9 0.18 3.8E-06 54.3 10.8 44 968-1014 149-192 (222)
245 PRK14010 potassium-transportin 94.8 0.15 3.2E-06 63.6 11.1 40 794-838 441-480 (673)
246 TIGR00338 serB phosphoserine p 94.2 0.047 1E-06 58.5 4.4 43 968-1013 152-194 (219)
247 TIGR01511 ATPase-IB1_Cu copper 94.2 0.23 5E-06 61.3 11.0 99 932-1057 407-518 (562)
248 TIGR01675 plant-AP plant acid 94.2 0.12 2.7E-06 55.5 7.4 40 795-839 121-163 (229)
249 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.2 0.074 1.6E-06 58.2 5.9 65 779-849 10-76 (242)
250 TIGR01525 ATPase-IB_hvy heavy 94.2 0.19 4.2E-06 61.9 10.2 101 931-1058 385-500 (556)
251 PRK14985 maltodextrin phosphor 94.1 0.1 2.2E-06 65.0 7.4 147 475-630 524-688 (798)
252 TIGR01490 HAD-SF-IB-hyp1 HAD-s 94.0 0.046 1E-06 57.8 3.6 49 963-1014 150-198 (202)
253 TIGR02093 P_ylase glycogen/sta 93.9 0.14 2.9E-06 64.0 7.9 148 475-631 522-687 (794)
254 PF04101 Glyco_tran_28_C: Glyc 93.8 0.05 1.1E-06 55.7 3.5 90 549-648 55-154 (167)
255 PF00343 Phosphorylase: Carboh 93.7 0.36 7.8E-06 59.7 10.9 147 476-630 440-603 (713)
256 PF12038 DUF3524: Domain of un 93.6 0.2 4.4E-06 50.6 7.0 77 305-393 59-136 (168)
257 PF08235 LNS2: LNS2 (Lipin/Ned 93.5 0.22 4.7E-06 50.3 7.3 62 780-849 2-82 (157)
258 PRK11009 aphA acid phosphatase 93.4 0.28 6.1E-06 53.3 8.5 37 798-839 118-158 (237)
259 TIGR01512 ATPase-IB2_Cd heavy 93.3 0.31 6.6E-06 59.9 9.7 84 932-1027 364-463 (536)
260 TIGR01488 HAD-SF-IB Haloacid D 93.2 0.053 1.1E-06 55.9 2.4 42 962-1006 136-177 (177)
261 TIGR02253 CTE7 HAD superfamily 92.7 0.22 4.7E-06 53.4 6.3 43 969-1014 152-196 (221)
262 TIGR01533 lipo_e_P4 5'-nucleot 92.5 0.34 7.5E-06 53.5 7.7 48 797-849 121-171 (266)
263 PHA02530 pseT polynucleotide k 92.5 0.16 3.5E-06 57.3 5.4 56 779-839 160-227 (300)
264 PRK11033 zntA zinc/cadmium/mer 92.5 0.34 7.4E-06 61.7 8.7 80 934-1027 572-665 (741)
265 KOG0210 P-type ATPase [Inorgan 92.4 0.82 1.8E-05 55.1 10.8 41 968-1014 768-809 (1051)
266 TIGR01656 Histidinol-ppas hist 92.4 0.21 4.5E-06 50.2 5.4 54 780-838 3-81 (147)
267 KOG0202 Ca2+ transporting ATPa 92.4 2.6 5.7E-05 52.4 15.3 37 797-838 587-623 (972)
268 PLN02575 haloacid dehalogenase 92.2 0.64 1.4E-05 54.0 9.7 41 969-1012 274-314 (381)
269 COG1778 Low specificity phosph 92.2 0.14 3E-06 50.9 3.6 60 775-839 6-75 (170)
270 PF00201 UDPGT: UDP-glucoronos 92.2 0.37 8.1E-06 58.6 8.3 92 549-653 323-420 (500)
271 PLN03190 aminophospholipid tra 92.0 0.67 1.5E-05 61.7 10.8 40 794-838 726-765 (1178)
272 PF12710 HAD: haloacid dehalog 91.8 0.18 3.8E-06 52.6 4.3 38 797-839 92-129 (192)
273 TIGR01668 YqeG_hyp_ppase HAD s 91.8 0.35 7.5E-06 49.9 6.3 55 779-838 27-83 (170)
274 TIGR01685 MDP-1 magnesium-depe 91.5 0.39 8.5E-06 49.7 6.3 40 795-839 46-86 (174)
275 COG4370 Uncharacterized protei 91.3 2.3 4.9E-05 46.9 11.9 142 487-653 234-394 (412)
276 PF11440 AGT: DNA alpha-glucos 91.3 23 0.00051 38.9 19.2 141 484-639 187-354 (355)
277 TIGR00213 GmhB_yaeD D,D-heptos 91.3 0.38 8.3E-06 49.8 6.0 34 974-1010 113-146 (176)
278 TIGR01261 hisB_Nterm histidino 91.2 0.41 8.8E-06 49.0 6.0 62 776-847 2-89 (161)
279 TIGR01663 PNK-3'Pase polynucle 90.9 0.47 1E-05 57.5 7.0 68 773-850 166-257 (526)
280 PRK08238 hypothetical protein; 90.8 0.54 1.2E-05 56.6 7.4 48 797-853 75-122 (479)
281 TIGR02137 HSK-PSP phosphoserin 90.8 0.18 3.9E-06 53.6 3.1 51 966-1027 130-180 (203)
282 KOG2882 p-Nitrophenyl phosphat 90.7 3 6.6E-05 46.2 12.3 51 972-1025 229-281 (306)
283 smart00577 CPDc catalytic doma 90.3 0.59 1.3E-05 47.0 6.2 37 796-838 47-83 (148)
284 TIGR01652 ATPase-Plipid phosph 90.2 1.8 4E-05 57.6 12.3 41 793-838 630-670 (1057)
285 KOG0203 Na+/K+ ATPase, alpha s 90.1 1.8 3.8E-05 53.8 10.7 85 936-1045 672-756 (1019)
286 PLN03243 haloacid dehalogenase 89.9 1.9 4.1E-05 47.8 10.3 41 969-1012 167-207 (260)
287 COG2217 ZntA Cation transport 89.5 1.6 3.5E-05 54.8 10.2 73 934-1016 541-628 (713)
288 PF06437 ISN1: IMP-specific 5' 89.2 0.98 2.1E-05 51.3 7.2 217 776-1016 146-402 (408)
289 PRK08942 D,D-heptose 1,7-bisph 88.8 1.1 2.4E-05 46.6 7.1 35 973-1010 109-143 (181)
290 TIGR01456 CECR5 HAD-superfamil 88.5 0.69 1.5E-05 52.9 5.8 64 779-849 2-73 (321)
291 PRK14089 ipid-A-disaccharide s 88.5 21 0.00045 41.3 17.7 80 492-603 182-261 (347)
292 PLN02207 UDP-glycosyltransfera 88.1 69 0.0015 38.7 34.8 134 479-637 275-425 (468)
293 TIGR01489 DKMTPPase-SF 2,3-dik 87.9 0.91 2E-05 47.0 5.8 41 964-1010 145-185 (188)
294 PLN02940 riboflavin kinase 87.8 0.61 1.3E-05 54.7 4.8 44 969-1015 152-196 (382)
295 TIGR01686 FkbH FkbH-like domai 87.5 1.5 3.2E-05 50.2 7.6 66 775-848 3-83 (320)
296 PRK10422 lipopolysaccharide co 87.5 59 0.0013 37.5 21.1 104 479-603 183-288 (352)
297 PRK05446 imidazole glycerol-ph 86.1 1.3 2.8E-05 51.1 6.2 64 775-848 2-92 (354)
298 PRK06769 hypothetical protein; 86.1 1.2 2.6E-05 46.0 5.4 43 776-825 5-54 (173)
299 PF10933 DUF2827: Protein of u 85.6 75 0.0016 36.6 19.3 118 539-669 241-363 (364)
300 PF05152 DUF705: Protein of un 85.1 3.2 7E-05 45.6 8.1 66 779-850 124-192 (297)
301 TIGR01680 Veg_Stor_Prot vegeta 84.9 2.3 5.1E-05 46.8 7.0 39 796-839 147-188 (275)
302 PF03033 Glyco_transf_28: Glyc 84.8 1.3 2.8E-05 43.4 4.8 118 190-338 8-131 (139)
303 TIGR00338 serB phosphoserine p 84.8 1.6 3.5E-05 46.6 5.9 37 798-839 89-125 (219)
304 PF13242 Hydrolase_like: HAD-h 84.8 1.8 3.9E-05 37.9 5.1 48 971-1020 8-56 (75)
305 KOG4626 O-linked N-acetylgluco 84.6 8.2 0.00018 46.5 11.6 181 475-676 754-945 (966)
306 PLN03004 UDP-glycosyltransfera 83.4 2.9 6.4E-05 50.0 7.7 143 479-640 270-426 (451)
307 COG0637 Predicted phosphatase/ 82.9 1.7 3.7E-05 46.8 5.1 38 797-839 89-126 (221)
308 PF09419 PGP_phosphatase: Mito 82.9 3.1 6.7E-05 42.7 6.6 59 776-839 42-108 (168)
309 PRK06698 bifunctional 5'-methy 82.4 5.1 0.00011 48.2 9.4 39 968-1011 386-424 (459)
310 PRK13222 phosphoglycolate phos 82.2 1.2 2.7E-05 47.6 3.6 45 969-1016 151-196 (226)
311 PLN02954 phosphoserine phospha 81.6 2.9 6.2E-05 44.9 6.2 43 965-1012 152-194 (224)
312 COG2179 Predicted hydrolase of 81.2 4.6 9.9E-05 41.0 6.8 57 776-839 29-86 (175)
313 PF04413 Glycos_transf_N: 3-De 80.1 16 0.00034 38.4 10.8 72 305-393 95-166 (186)
314 PF03767 Acid_phosphat_B: HAD 79.4 1.1 2.4E-05 48.6 2.0 38 797-839 118-158 (229)
315 PRK11590 hypothetical protein; 79.0 1.9 4.2E-05 46.0 3.7 47 962-1014 157-203 (211)
316 KOG0853 Glycosyltransferase [C 78.8 5.2 0.00011 47.8 7.4 30 190-221 46-84 (495)
317 PF10087 DUF2325: Uncharacteri 78.1 5.3 0.00012 37.0 6.0 81 516-611 3-90 (97)
318 PF00702 Hydrolase: haloacid d 78.0 1.3 2.9E-05 46.7 2.2 34 971-1007 182-215 (215)
319 PLN02954 phosphoserine phospha 77.7 2.1 4.5E-05 45.9 3.6 36 798-838 88-123 (224)
320 TIGR01545 YfhB_g-proteo haloac 77.4 2.1 4.6E-05 45.8 3.5 45 963-1013 157-201 (210)
321 PF06925 MGDG_synth: Monogalac 76.9 15 0.00032 37.7 9.5 61 304-392 88-153 (169)
322 PF05159 Capsule_synth: Capsul 75.6 20 0.00043 39.7 10.8 124 477-629 114-245 (269)
323 PF12689 Acid_PPase: Acid Phos 75.3 5.6 0.00012 40.9 5.7 38 796-838 47-85 (169)
324 PRK13582 thrH phosphoserine ph 75.2 1.8 3.9E-05 45.7 2.2 40 968-1014 132-171 (205)
325 KOG0204 Calcium transporting A 74.0 14 0.00031 46.3 9.4 39 795-838 648-686 (1034)
326 TIGR02250 FCP1_euk FCP1-like p 73.5 10 0.00022 38.5 7.1 36 797-838 61-96 (156)
327 TIGR01449 PGP_bact 2-phosphogl 73.5 2.4 5.2E-05 44.9 2.7 41 969-1012 143-183 (213)
328 PRK13288 pyrophosphatase PpaX; 73.1 5 0.00011 42.7 5.0 44 965-1011 136-179 (214)
329 COG2327 WcaK Polysaccharide py 72.9 2E+02 0.0042 33.7 29.8 87 549-644 266-357 (385)
330 TIGR01544 HAD-SF-IE haloacid d 72.6 3.2 6.9E-05 46.2 3.4 37 967-1006 191-230 (277)
331 PTZ00445 p36-lilke protein; Pr 72.1 2.8 6.1E-05 44.3 2.6 50 963-1015 157-207 (219)
332 KOG1615 Phosphoserine phosphat 71.0 4.3 9.3E-05 42.1 3.6 45 963-1012 154-198 (227)
333 PF08645 PNK3P: Polynucleotide 71.0 3.2 6.9E-05 42.3 2.8 39 779-822 2-52 (159)
334 TIGR03333 salvage_mtnX 2-hydro 70.0 4.2 9.1E-05 43.5 3.6 41 966-1013 142-182 (214)
335 TIGR03609 S_layer_CsaB polysac 69.5 1.4E+02 0.0031 33.3 16.1 40 555-603 237-276 (298)
336 TIGR01662 HAD-SF-IIIA HAD-supe 69.4 16 0.00034 35.5 7.3 41 968-1011 86-128 (132)
337 PF03031 NIF: NLI interacting 68.9 5 0.00011 40.5 3.7 52 780-837 3-73 (159)
338 TIGR01489 DKMTPPase-SF 2,3-dik 68.4 5.3 0.00011 41.2 3.8 46 797-848 75-120 (188)
339 TIGR01261 hisB_Nterm histidino 68.2 8.5 0.00018 39.3 5.2 75 937-1015 73-148 (161)
340 COG4996 Predicted phosphatase 67.5 12 0.00027 36.2 5.6 47 796-848 43-89 (164)
341 KOG0206 P-type ATPase [General 66.5 22 0.00047 47.0 9.3 40 794-838 651-690 (1151)
342 COG1703 ArgK Putative periplas 65.7 76 0.0016 35.7 12.0 126 190-351 61-187 (323)
343 COG0241 HisB Histidinol phosph 65.1 11 0.00025 39.1 5.4 41 776-823 6-55 (181)
344 PF08660 Alg14: Oligosaccharid 64.8 45 0.00098 34.4 9.7 30 304-333 91-126 (170)
345 TIGR01454 AHBA_synth_RP 3-amin 64.6 5.2 0.00011 42.2 2.9 41 968-1011 132-172 (205)
346 PRK13582 thrH phosphoserine ph 64.2 10 0.00022 39.9 5.1 34 800-839 74-107 (205)
347 COG4087 Soluble P-type ATPase 64.1 9.7 0.00021 37.1 4.2 25 985-1012 94-118 (152)
348 PF15024 Glyco_transf_18: Glyc 63.8 13 0.00027 45.1 6.1 152 479-670 276-454 (559)
349 TIGR01656 Histidinol-ppas hist 62.6 13 0.00029 37.1 5.3 42 967-1011 101-142 (147)
350 COG3882 FkbH Predicted enzyme 62.1 19 0.00042 42.4 6.9 56 773-835 220-291 (574)
351 TIGR02245 HAD_IIID1 HAD-superf 62.1 18 0.00039 38.2 6.3 59 772-838 18-83 (195)
352 PF06888 Put_Phosphatase: Puta 61.4 11 0.00024 41.0 4.6 52 962-1015 144-198 (234)
353 COG4359 Uncharacterized conser 61.0 20 0.00043 37.0 6.0 39 794-837 73-111 (220)
354 PRK09552 mtnX 2-hydroxy-3-keto 60.0 6.5 0.00014 42.1 2.7 38 967-1011 147-184 (219)
355 KOG1192 UDP-glucuronosyl and U 60.0 60 0.0013 39.3 11.4 159 480-667 278-451 (496)
356 KOG1021 Acetylglucosaminyltran 59.7 56 0.0012 39.4 10.8 72 559-637 334-408 (464)
357 TIGR01548 HAD-SF-IA-hyp1 haloa 58.1 18 0.00039 37.9 5.6 46 799-850 111-156 (197)
358 PRK10725 fructose-1-P/6-phosph 57.5 11 0.00025 38.8 4.0 40 969-1011 144-183 (188)
359 COG4087 Soluble P-type ATPase 57.2 10 0.00023 36.9 3.1 52 781-839 18-69 (152)
360 PLN02770 haloacid dehalogenase 56.7 18 0.00039 39.6 5.5 48 797-850 111-158 (248)
361 TIGR02251 HIF-SF_euk Dullard-l 55.9 29 0.00063 35.4 6.5 36 797-838 45-80 (162)
362 COG0546 Gph Predicted phosphat 55.7 11 0.00024 40.5 3.5 43 969-1014 147-192 (220)
363 COG0546 Gph Predicted phosphat 55.0 22 0.00048 38.1 5.7 46 797-848 92-137 (220)
364 PRK10748 flavin mononucleotide 52.9 15 0.00033 39.9 4.1 35 772-806 5-39 (238)
365 PF04230 PS_pyruv_trans: Polys 52.0 3.3E+02 0.0071 29.1 16.1 46 549-603 238-283 (286)
366 PF03016 Exostosin: Exostosin 51.5 14 0.0003 41.4 3.7 70 560-633 228-300 (302)
367 TIGR01990 bPGM beta-phosphoglu 51.3 10 0.00022 39.1 2.3 41 968-1011 142-182 (185)
368 PRK13288 pyrophosphatase PpaX; 51.2 22 0.00047 37.8 4.9 46 797-848 85-130 (214)
369 PRK13932 stationary phase surv 50.6 1.2E+02 0.0026 33.5 10.5 40 163-221 3-42 (257)
370 PRK08942 D,D-heptose 1,7-bisph 50.5 12 0.00026 38.8 2.7 43 776-825 4-55 (181)
371 KOG0208 Cation transport ATPas 50.4 38 0.00083 43.4 7.3 42 793-839 704-745 (1140)
372 PF00702 Hydrolase: haloacid d 50.2 26 0.00056 36.7 5.3 40 794-838 127-166 (215)
373 TIGR01449 PGP_bact 2-phosphogl 49.8 21 0.00045 37.7 4.5 47 797-849 88-134 (213)
374 TIGR03351 PhnX-like phosphonat 49.5 12 0.00026 39.9 2.6 40 969-1011 147-187 (220)
375 PLN02779 haloacid dehalogenase 49.5 13 0.00028 41.8 3.0 41 970-1013 205-245 (286)
376 KOG3120 Predicted haloacid deh 49.5 16 0.00035 38.8 3.4 53 959-1013 154-209 (256)
377 COG4030 Uncharacterized protei 49.0 20 0.00043 38.1 3.9 35 968-1006 191-225 (315)
378 PF06941 NT5C: 5' nucleotidase 48.8 18 0.00038 37.9 3.7 36 796-836 75-117 (191)
379 TIGR01454 AHBA_synth_RP 3-amin 48.2 20 0.00044 37.7 4.1 47 797-849 78-124 (205)
380 COG2216 KdpB High-affinity K+ 48.1 12 0.00026 44.3 2.4 55 961-1027 492-546 (681)
381 TIGR03351 PhnX-like phosphonat 48.0 21 0.00046 37.9 4.3 49 796-849 89-138 (220)
382 KOG0207 Cation transport ATPas 47.7 50 0.0011 42.2 7.7 50 959-1017 766-815 (951)
383 TIGR02195 heptsyl_trn_II lipop 47.3 1.1E+02 0.0024 34.9 10.3 103 477-603 171-277 (334)
384 TIGR00715 precor6x_red precorr 46.9 1.1E+02 0.0023 34.0 9.5 86 541-636 166-255 (256)
385 cd03789 GT1_LPS_heptosyltransf 46.8 66 0.0014 35.7 8.1 100 482-604 124-225 (279)
386 TIGR01494 ATPase_P-type ATPase 45.6 26 0.00057 42.7 5.0 39 968-1013 394-432 (499)
387 PLN02770 haloacid dehalogenase 44.9 32 0.00069 37.6 5.1 41 968-1011 165-205 (248)
388 TIGR02253 CTE7 HAD superfamily 44.8 23 0.00051 37.6 4.0 47 797-849 97-143 (221)
389 PF13419 HAD_2: Haloacid dehal 44.7 23 0.0005 35.4 3.7 47 797-849 80-126 (176)
390 PLN03243 haloacid dehalogenase 44.1 30 0.00066 38.2 4.8 47 797-849 112-158 (260)
391 PRK10826 2-deoxyglucose-6-phos 43.7 29 0.00063 37.1 4.5 47 797-849 95-141 (222)
392 PRK14988 GMP/IMP nucleotidase; 43.7 53 0.0012 35.3 6.5 45 969-1016 151-197 (224)
393 PF13419 HAD_2: Haloacid dehal 43.4 16 0.00034 36.7 2.2 41 968-1011 134-174 (176)
394 TIGR01422 phosphonatase phosph 43.1 29 0.00063 37.9 4.5 47 797-849 102-149 (253)
395 TIGR01993 Pyr-5-nucltdase pyri 43.1 26 0.00057 36.1 3.9 40 969-1011 143-182 (184)
396 smart00577 CPDc catalytic doma 42.6 33 0.00072 34.3 4.4 35 973-1010 104-138 (148)
397 PLN02575 haloacid dehalogenase 42.0 32 0.0007 40.2 4.7 47 797-849 219-265 (381)
398 TIGR01428 HAD_type_II 2-haloal 41.3 37 0.00079 35.5 4.7 47 797-849 95-141 (198)
399 PLN02177 glycerol-3-phosphate 40.5 23 0.0005 43.0 3.3 43 965-1014 173-215 (497)
400 TIGR02009 PGMB-YQAB-SF beta-ph 39.7 21 0.00045 36.7 2.5 39 969-1010 144-182 (185)
401 PRK13222 phosphoglycolate phos 39.7 43 0.00093 35.6 5.0 47 797-849 96-142 (226)
402 TIGR02193 heptsyl_trn_I lipopo 39.3 3.8E+02 0.0081 30.2 13.0 133 479-636 179-319 (319)
403 PRK11587 putative phosphatase; 39.2 31 0.00067 36.8 3.8 45 969-1016 140-185 (218)
404 TIGR01428 HAD_type_II 2-haloal 39.1 23 0.0005 37.0 2.8 43 969-1014 150-192 (198)
405 PRK10964 ADP-heptose:LPS hepto 38.9 2.5E+02 0.0055 31.8 11.5 47 549-604 234-280 (322)
406 TIGR01509 HAD-SF-IA-v3 haloaci 38.5 31 0.00067 35.2 3.6 39 970-1011 143-181 (183)
407 cd07944 DRE_TIM_HOA_like 4-hyd 38.5 5.5E+02 0.012 28.5 13.6 126 491-636 104-239 (266)
408 PLN02779 haloacid dehalogenase 37.9 25 0.00055 39.5 3.0 28 776-805 41-69 (286)
409 TIGR02009 PGMB-YQAB-SF beta-ph 37.7 35 0.00076 35.0 3.8 45 797-849 91-135 (185)
410 PF01975 SurE: Survival protei 37.0 37 0.0008 35.9 3.8 38 166-221 1-38 (196)
411 PF06888 Put_Phosphatase: Puta 36.6 81 0.0017 34.4 6.4 49 797-849 74-122 (234)
412 PRK06769 hypothetical protein; 35.9 22 0.00048 36.6 2.0 42 969-1013 95-136 (173)
413 PRK13225 phosphoglycolate phos 35.7 45 0.00097 37.2 4.5 46 797-848 145-190 (273)
414 KOG1618 Predicted phosphatase 35.5 27 0.00059 39.1 2.6 63 776-840 34-100 (389)
415 TIGR01549 HAD-SF-IA-v1 haloaci 35.4 25 0.00055 34.9 2.3 35 968-1006 119-153 (154)
416 TIGR01511 ATPase-IB1_Cu copper 35.3 49 0.0011 41.0 5.1 56 776-838 386-444 (562)
417 KOG0209 P-type ATPase [Inorgan 35.1 26 0.00057 43.9 2.6 44 968-1018 794-837 (1160)
418 PRK10563 6-phosphogluconate ph 34.9 28 0.00062 37.0 2.7 44 969-1015 144-187 (221)
419 PRK13226 phosphoglycolate phos 34.6 59 0.0013 35.0 5.1 47 797-849 98-144 (229)
420 PRK13478 phosphonoacetaldehyde 34.5 55 0.0012 36.1 5.0 48 797-849 104-151 (267)
421 PRK10563 6-phosphogluconate ph 34.3 44 0.00094 35.6 4.0 16 776-793 5-20 (221)
422 TIGR00213 GmhB_yaeD D,D-heptos 34.3 27 0.0006 35.9 2.4 43 776-825 2-52 (176)
423 TIGR01491 HAD-SF-IB-PSPlk HAD- 34.0 69 0.0015 33.2 5.4 38 797-839 83-120 (201)
424 TIGR01509 HAD-SF-IA-v3 haloaci 33.9 54 0.0012 33.3 4.5 46 797-849 88-133 (183)
425 PRK13223 phosphoglycolate phos 33.8 52 0.0011 36.6 4.6 47 797-849 104-150 (272)
426 PF04392 ABC_sub_bind: ABC tra 33.2 86 0.0019 35.2 6.3 69 533-603 147-218 (294)
427 TIGR01493 HAD-SF-IA-v2 Haloaci 32.9 33 0.00072 34.9 2.7 26 780-805 2-27 (175)
428 PRK10725 fructose-1-P/6-phosph 32.4 34 0.00075 35.2 2.8 27 776-804 6-32 (188)
429 PRK09552 mtnX 2-hydroxy-3-keto 32.3 59 0.0013 34.7 4.6 46 795-849 75-120 (219)
430 TIGR01691 enolase-ppase 2,3-di 31.7 97 0.0021 33.4 6.1 42 968-1012 153-194 (220)
431 PRK08238 hypothetical protein; 31.5 63 0.0014 39.1 5.1 45 964-1016 124-168 (479)
432 TIGR01422 phosphonatase phosph 31.2 39 0.00085 36.9 3.1 44 969-1015 158-203 (253)
433 TIGR00087 surE 5'/3'-nucleotid 31.0 3.5E+02 0.0076 29.7 10.3 37 166-221 1-37 (244)
434 TIGR02252 DREG-2 REG-2-like, H 31.0 38 0.00082 35.5 2.8 38 970-1010 163-201 (203)
435 TIGR01490 HAD-SF-IB-hyp1 HAD-s 31.0 92 0.002 32.4 5.8 41 794-839 87-127 (202)
436 PRK14988 GMP/IMP nucleotidase; 30.9 61 0.0013 34.9 4.4 47 797-849 96-142 (224)
437 PF03308 ArgK: ArgK protein; 30.8 3E+02 0.0064 30.5 9.5 117 190-340 39-156 (266)
438 PRK11587 putative phosphatase; 30.4 74 0.0016 33.8 5.0 46 797-849 86-131 (218)
439 PRK11033 zntA zinc/cadmium/mer 29.7 61 0.0013 41.6 4.8 59 776-839 549-608 (741)
440 PF01075 Glyco_transf_9: Glyco 29.6 3E+02 0.0066 29.5 9.8 103 479-603 105-209 (247)
441 TIGR02244 HAD-IG-Ncltidse HAD 29.4 93 0.002 35.9 5.7 50 796-851 186-243 (343)
442 COG2179 Predicted hydrolase of 29.4 98 0.0021 31.8 5.1 68 928-998 44-123 (175)
443 TIGR01668 YqeG_hyp_ppase HAD s 29.0 46 0.001 34.1 3.0 42 969-1013 93-135 (170)
444 PRK11590 hypothetical protein; 28.5 94 0.002 33.0 5.3 47 797-850 98-145 (211)
445 PRK09456 ?-D-glucose-1-phospha 27.7 57 0.0012 34.2 3.4 41 969-1012 143-183 (199)
446 PRK06698 bifunctional 5'-methy 27.7 67 0.0014 38.7 4.5 47 797-849 333-379 (459)
447 KOG3040 Predicted sugar phosph 27.3 68 0.0015 34.0 3.7 59 776-840 8-67 (262)
448 PRK13478 phosphonoacetaldehyde 26.9 54 0.0012 36.2 3.2 43 969-1014 160-204 (267)
449 TIGR01681 HAD-SF-IIIC HAD-supe 26.8 58 0.0013 31.7 3.1 31 968-1001 90-122 (128)
450 PRK00207 sulfur transfer compl 26.4 1.1E+02 0.0024 29.9 5.0 39 166-218 1-40 (128)
451 TIGR01686 FkbH FkbH-like domai 26.3 42 0.0009 38.3 2.3 40 968-1010 87-126 (320)
452 TIGR01549 HAD-SF-IA-v1 haloaci 26.2 1E+02 0.0022 30.4 4.9 44 798-848 68-111 (154)
453 TIGR01548 HAD-SF-IA-hyp1 haloa 26.0 41 0.00089 35.1 2.0 32 968-1002 162-193 (197)
454 TIGR01993 Pyr-5-nucltdase pyri 25.9 54 0.0012 33.8 2.8 26 780-805 3-28 (184)
455 TIGR01488 HAD-SF-IB Haloacid D 25.8 95 0.0021 31.4 4.6 38 797-839 76-113 (177)
456 PRK10840 transcriptional regul 25.3 7E+02 0.015 26.0 11.5 65 574-638 51-126 (216)
457 TIGR03333 salvage_mtnX 2-hydro 25.2 1.1E+02 0.0024 32.5 5.1 38 795-837 71-108 (214)
458 PLN02940 riboflavin kinase 25.0 77 0.0017 37.2 4.2 48 797-850 96-144 (382)
459 PF14980 TIP39: TIP39 peptide 24.9 47 0.001 26.2 1.5 15 4-18 36-50 (51)
460 TIGR02201 heptsyl_trn_III lipo 24.9 2.9E+02 0.0063 31.6 8.9 45 550-603 242-286 (344)
461 PF12689 Acid_PPase: Acid Phos 24.1 2.2E+02 0.0049 29.3 6.9 44 959-1007 101-144 (169)
462 COG1618 Predicted nucleotide k 24.0 8.2E+02 0.018 25.3 10.6 128 163-336 3-138 (179)
463 PHA02597 30.2 hypothetical pro 23.9 39 0.00085 35.2 1.4 14 775-790 2-15 (197)
464 PRK13935 stationary phase surv 23.6 5.4E+02 0.012 28.4 10.0 37 166-221 1-37 (253)
465 PRK09449 dUMP phosphatase; Pro 23.5 95 0.0021 33.0 4.3 46 797-849 98-143 (224)
466 PHA02530 pseT polynucleotide k 23.4 57 0.0012 36.6 2.6 43 967-1012 251-294 (300)
467 COG0859 RfaF ADP-heptose:LPS h 23.4 2.8E+02 0.0061 31.7 8.4 99 480-603 176-277 (334)
468 COG2217 ZntA Cation transport 23.3 80 0.0017 40.1 4.0 41 794-839 537-577 (713)
469 COG1887 TagB Putative glycosyl 23.2 1.3E+03 0.027 27.2 14.4 166 476-669 204-384 (388)
470 TIGR02254 YjjG/YfnB HAD superf 22.9 69 0.0015 33.9 3.1 41 969-1012 154-196 (224)
471 TIGR02254 YjjG/YfnB HAD superf 22.4 1.2E+02 0.0026 31.9 4.9 46 797-849 100-145 (224)
472 KOG2116 Protein involved in pl 22.2 1.5E+02 0.0033 36.5 5.8 69 779-857 532-614 (738)
473 TIGR01990 bPGM beta-phosphoglu 22.0 1.2E+02 0.0025 31.0 4.4 45 797-849 90-134 (185)
474 PLN02811 hydrolase 22.0 87 0.0019 33.4 3.6 41 969-1012 139-182 (220)
475 PRK13015 3-dehydroquinate dehy 21.7 1.7E+02 0.0037 29.3 5.1 102 532-636 29-140 (146)
476 COG2910 Putative NADH-flavin r 20.6 1.1E+02 0.0023 32.1 3.6 34 166-220 1-34 (211)
477 PRK10671 copA copper exporting 20.6 1.7E+02 0.0038 38.1 6.6 41 794-839 650-690 (834)
478 TIGR01685 MDP-1 magnesium-depe 20.5 2.6E+02 0.0056 29.0 6.5 28 981-1011 127-154 (174)
479 TIGR02247 HAD-1A3-hyp Epoxide 20.5 71 0.0015 33.7 2.5 42 970-1014 155-197 (211)
480 TIGR02252 DREG-2 REG-2-like, H 20.3 1.4E+02 0.0029 31.2 4.6 47 797-850 108-154 (203)
481 PLN03004 UDP-glycosyltransfera 20.3 1.3E+03 0.029 27.6 13.5 25 192-216 15-39 (451)
482 TIGR01361 DAHP_synth_Bsub phos 20.2 5.6E+02 0.012 28.4 9.5 109 486-604 29-140 (260)
483 TIGR01664 DNA-3'-Pase DNA 3'-p 20.0 1.5E+02 0.0033 30.3 4.7 26 969-995 110-137 (166)
No 1
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=9.4e-206 Score=1866.88 Aligned_cols=1039 Identities=67% Similarity=1.112 Sum_probs=927.1
Q ss_pred CCCCchhhhHHHHHHhcCCchhhhhhcccCcccccCCCCCCchhhHhhhhcccCcchhhHHHHHHHHhcchhhhhhhhhh
Q 001492 1 MAGNEWINGYLEAILDSGASAIEEQQKQAPVNLADRGHFNPTKYFVEEVVTSVDETDLYRTWIKVVATRNTRERSSRLEN 80 (1067)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1067)
||||||||||||||||+|+|+++++++ +.+++||+|+||||||||||||||||||||||||+||+||||||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (1050)
T TIGR02468 1 MAGNDWINSYLEAILDVGPGLDDAKSS-ALLLLRERGRFSPTRYFVEEVITGFDETDLHRTWVKAVATRSPQERNTRLEN 79 (1050)
T ss_pred CCcchHHHHHHHHHHhcCCCccccccc-ccccccccCccCCceeeEEeecccccchhhhhHHHHHHhhcChhhhhhhhhh
Confidence 999999999999999999999988862 2478999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhhhhhhcHHHHHHHHHHHHhhhhchhhhhhhhhcccCCCcCCCcccccCCC-CC--cccccccccc--ccc
Q 001492 81 MCWRIWHLTRKKKQLEWEELQRLANRRLEREQGRRDVTEDMSEDLSEGEKGDGVGEIQTP-DT--PRKKFQRNFS--NLE 155 (1067)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~--~~~ 155 (1067)
||||||||||||||||||+|||+|+||+||||||||||+|||||||||||+|.++++++| ++ +++|++|++| .|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (1050)
T TIGR02468 80 MCWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATADMSEDLSEGEKGDVAGDISVAGGEPSTKGRLPRISSNLEME 159 (1050)
T ss_pred hHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhHhhcCCcccCcccccccccCCCccccccccccccchhh
Confidence 999999999999999999999999999999999999999999999999999999999998 33 5799999999 689
Q ss_pred ccccccCCCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccc
Q 001492 156 VWSDDKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEM 235 (1067)
Q Consensus 156 ~~~~~~~~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~ 235 (1067)
.|+++++.++|||+|||+||+|||+||++||++|+|||.+||++||++|+++||||+|+|+||++.+|.++|+|++|.|+
T Consensus 160 ~~~~~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~ 239 (1050)
T TIGR02468 160 TWSDQQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEM 239 (1050)
T ss_pred cchhhcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999989999999999999
Q ss_pred cCCCCCC-CCccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC
Q 001492 236 LTGGPED-DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA 314 (1067)
Q Consensus 236 l~~~~~~-~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~ 314 (1067)
+++...+ ...++.+++|++|+|+||||.++|++|+.+|||+..|++.++.++.++.+.|++|++.+++.+|||||+|||
T Consensus 240 ~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw 319 (1050)
T TIGR02468 240 LTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYA 319 (1050)
T ss_pred ccccccccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcc
Confidence 9876555 667788899999999999999779999999999999999999999999999999998877778999999999
Q ss_pred chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhh
Q 001492 315 DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGL 394 (1067)
Q Consensus 315 ~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~ 394 (1067)
+++++++.+++.+|+|+|+|+|++++.++.+++.+|..+...++..|++.+|+.+|+.++..||.|||+|++++++||.+
T Consensus 320 ~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~l 399 (1050)
T TIGR02468 320 DAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGL 399 (1050)
T ss_pred hHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHH
Confidence 99999999999999999999999999999989899987778888999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhh
Q 001492 395 YDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRF 474 (1067)
Q Consensus 395 y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1067)
|++|+|.++++|++|+++||+|||++++|+.|||||||++.|.|.... ....... .......+.+++|..+++|
T Consensus 400 Y~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~--~~~~~~~----~~~~~~~~~~~~~~~l~r~ 473 (1050)
T TIGR02468 400 YDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGD--MDGETEG----NEEHPAKPDPPIWSEIMRF 473 (1050)
T ss_pred hccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCcc--ccchhcc----cccccccccchhhHHHHhh
Confidence 999999999999999999999999999999999999999999986521 1111000 0001234567788899999
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeC
Q 001492 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYP 554 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~ 554 (1067)
+..+++|+|+++||+++.||+..||+||..++.+...+++.+|+|++++.+++......+..++..+++++++.++|.|+
T Consensus 474 ~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~Fl 553 (1050)
T TIGR02468 474 FTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYP 553 (1050)
T ss_pred cccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEec
Confidence 99999999999999999999999999999997655667888889999888887777778889999999999999999999
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHH
Q 001492 555 KHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLK 634 (1067)
Q Consensus 555 g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ 634 (1067)
|++++++++.+|+.|+.+.||||+||++||||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++||++|.+
T Consensus 554 G~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~ 633 (1050)
T TIGR02468 554 KHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLK 633 (1050)
T ss_pred CCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHH
Confidence 99999999999999977778999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhcCCCCCCCCcc-hhhhhhhcccccchhhhhhhccccccCC
Q 001492 635 LVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPV-DEMAAEESSFNDSLKDVQDMSLRLSVDG 713 (1067)
Q Consensus 635 ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~sl~d~~~~~~~~~~~~ 713 (1067)
++++++++++|++++++.+++|+|+.++++|++.|..+..++|+|++..+. .+.++ ++++.++++|++||||+||+||
T Consensus 634 LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~ 712 (1050)
T TIGR02468 634 LVADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASE-DESPGDSLRDIQDISLNLSVDG 712 (1050)
T ss_pred HhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCccccccccccccccc-ccCccccccccccchhhccccc
Confidence 999999999999999999989999999999999999999999998864322 22222 5788999999999999999999
Q ss_pred CCCCCCCCCcccccCCCCchhhHHHHHHhhccCCCCCCcchHHHHhhh--hcccccCcccccCCeEEEEEEeCCCCCCCC
Q 001492 714 DKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLL--ENVVSKYPMLRRRRRLIVIALDCYDSKGAP 791 (1067)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~klllia~DiDGTLl~~ 791 (1067)
|+...+...+.....+..++..++.+++.+++++.. ++.++. .++.+|||++++|+++++||+|||.|++
T Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~~~-- 784 (1050)
T TIGR02468 713 DKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK------GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDDKD-- 784 (1050)
T ss_pred cccccccccccccccchhhHHHHHHHHHhhcccccc------ccccccccccccccCccccccceEEEEEeccCCCCC--
Confidence 976654332221122333445566666666655432 223333 3667999999999999999999999933
Q ss_pred chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCCCcccCCcCCCCh
Q 001492 792 DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDP 871 (1067)
Q Consensus 792 ~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~ 871 (1067)
..+.++++++++++....+++ +|+|+|||++.++.+++.+.++++.+||++||+.|++|||++....++..+.+|.
T Consensus 785 ---~~~~l~~~~~~~~~~~~~~~i-gfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~ 860 (1050)
T TIGR02468 785 ---LLQIIKNIFEAVRKERMEGSS-GFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQ 860 (1050)
T ss_pred ---hHHHHHHHHHHHhccccCCce-EEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECH
Confidence 446777778888743223779 9999999999999999999999755899999999999999843322345788999
Q ss_pred hhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHHHHHHHhcCCcEEE
Q 001492 872 DYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHP 951 (1067)
Q Consensus 872 ~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el~~~L~~~~~~~~v 951 (1067)
.|..||.++|.++.+++++.++++...+++.+. ...+..++...++.||++|++.++...+.+++|++.|++++++|++
T Consensus 861 ~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~-~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~ 939 (1050)
T TIGR02468 861 DYHSHIEYRWGGEGLRKTLVKWAASINEKKGEN-EEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHA 939 (1050)
T ss_pred HHHHHHHccCCcHHHHHHHHHHhhhcccccccc-cccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEE
Confidence 999999999999999999999998765544321 1345666778899999999988888888899999999999999999
Q ss_pred EEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccC--c
Q 001492 952 MYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTN--L 1029 (1067)
Q Consensus 952 ~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~--~ 1029 (1067)
++|+++.+|||+|.++|||+||+||+.+|||++++|+||+||++||||++||.+.+++|+|++.++.+++ ++|+++ +
T Consensus 940 iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~-~l~~~~sY~ 1018 (1050)
T TIGR02468 940 VYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSE-QLHANRSYP 1018 (1050)
T ss_pred EeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchh-hhcccCCCc
Confidence 9999866999999999999999999999999999999999999999999999999999999999988875 566888 9
Q ss_pred CCCCCCCCCCCceeecCcccHHHHHHHHHhhc
Q 001492 1030 RDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1030 ~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
++||||++||||.+++++|..++|..||++||
T Consensus 1019 ~eDVvp~dspni~~~~~~~~~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1019 LDDVVPLDSPNIVQATGGSSSDDISDALKKLS 1050 (1050)
T ss_pred ccccccCCCCCeEeecCCCCHHHHHHHHHhcC
Confidence 99999999999999999999999999999986
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=3.6e-57 Score=547.90 Aligned_cols=458 Identities=29% Similarity=0.513 Sum_probs=355.3
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHH--------HcCCCee----EEEEEecCCCCCCCCCcCC
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARAL--------ARMPGVY----RVDLFSRQVSSPEVDWSYG 230 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aL--------a~~G~v~----~V~v~t~~~~~~~~~~~y~ 230 (1067)
+|.|||+|||.||+++++| .+|+ ||+||+..||.+||++| +++| | +|+|+||.+.+.. ...|.
T Consensus 253 p~~~rIa~lS~Hg~~~~~~-~lG~-~DtGGq~vYV~elaraL~~~~~~~La~~G--~~v~~~V~I~TR~~~~~~-~~~~~ 327 (784)
T TIGR02470 253 PMVFNVVILSPHGYFGQEN-VLGL-PDTGGQVVYILDQVRALENEMLQRIKLQG--LEITPKILIVTRLIPDAE-GTTCN 327 (784)
T ss_pred CccceEEEEecccccCCcc-ccCC-CCCCCceeHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCCCCcc-ccccc
Confidence 6789999999999999888 4997 79999999999999985 6888 8 8889999875432 33455
Q ss_pred CcccccCCCCCCCCccccccCCeEEEeccCCCCc-----cCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCC
Q 001492 231 EPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRD-----KYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVW 305 (1067)
Q Consensus 231 ~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~-----~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~ 305 (1067)
++.|. +...++++|+|+|++|.. +|++|+.+|||+..|.+.+..++.+- .+.+
T Consensus 328 ~~~e~-----------~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~-----------~~~~ 385 (784)
T TIGR02470 328 QRLEK-----------VYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAE-----------LQGK 385 (784)
T ss_pred ccccc-----------ccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCC
Confidence 55433 334579999999999852 57999999999999999888766431 1246
Q ss_pred ceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCH
Q 001492 306 PYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTK 385 (1067)
Q Consensus 306 pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~ 385 (1067)
||+||+|||+++++|..+++.+|+|+|+|.|+++..++. ..|. .+...+..|++..++.+|..++..||.|||+|.
T Consensus 386 pDlIHahy~d~glva~lla~~lgVP~v~t~HsL~~~K~~---~~g~-~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~ 461 (784)
T TIGR02470 386 PDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYP---DSDI-YWQEFEDKYHFSCQFTADLIAMNAADFIITSTY 461 (784)
T ss_pred CCEEEECCCchHHHHHHHHHhcCCCEEEECCcchhhccc---cccc-ccccchhHHHhhhhhhHHHHHHhcCCEEEECcH
Confidence 999999999999999999999999999999999776632 2232 344456788889999999999999999999999
Q ss_pred HHHH------HHHhhcCCCch-HHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCc----cccccccccC
Q 001492 386 QEID------EQWGLYDGFDV-KLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPE----VDGELTSLIG 454 (1067)
Q Consensus 386 ~~~~------~~~~~y~~~~~-~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~----~~~~~~~~~~ 454 (1067)
+++. .||+.|..|.. .+ +++..|+ +.+.+|+.|||||+|...|.|...... ....++.++
T Consensus 462 qEi~~~~~~v~qY~s~~~ft~p~L-----y~vvnGi---d~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll- 532 (784)
T TIGR02470 462 QEIAGTKDSVGQYESHQAFTMPGL-----YRVVHGI---DVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELL- 532 (784)
T ss_pred HHhhhhhhhhhhhhhcccccccce-----eeeecCc---cCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhc-
Confidence 8866 35555554432 11 0122232 346679999999999999987652110 001111111
Q ss_pred CCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-hhhhhccchH
Q 001492 455 GTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDD-IEEMSSGNAS 533 (1067)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~-~~~l~~~~~~ 533 (1067)
..+........+...+++|+|+++||+++.||++.|++||.+++.++...+++ |+|++.+ ......+...
T Consensus 533 --------~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LV-IVGGg~~~~~s~d~ee~~ 603 (784)
T TIGR02470 533 --------FSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLV-VVAGKLDAKESKDREEQA 603 (784)
T ss_pred --------cchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEE-EEeCCcccccccchhHHH
Confidence 00111112223344678999999999999999999999999876555444553 5555432 1111122234
Q ss_pred HHHHHHHHHHhcCCCCcEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhc
Q 001492 534 VLITVLKLIDKYDLYGQVAYPKHH-KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHR 612 (1067)
Q Consensus 534 ~~~~i~~l~~~~~l~~~V~~~g~~-~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~ 612 (1067)
...++..+++++++.++|.|+|.. +..++.++|+.++.++||||+||++|+||+|++||||||+|||+|+.||+.|+|.
T Consensus 604 ~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~ 683 (784)
T TIGR02470 604 EIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQ 683 (784)
T ss_pred HHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhc
Confidence 677889999999999999999975 6778999998654445899999999999999999999999999999999999999
Q ss_pred cCCceEEeCCCCHHHHHHHHHHhh----cCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHH
Q 001492 613 ALNNGLLVDPHDQQAIADALLKLV----SEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 613 ~~~~Gllv~p~d~~~la~aL~~ll----~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 669 (1067)
++.+|++|+|.|+++++++|.+++ +||+.|++++++|++++ ++|||+.++++++++.
T Consensus 684 dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 684 DGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999999999876 69999999999999998 6999999999999876
No 3
>PLN00142 sucrose synthase
Probab=100.00 E-value=7.7e-56 Score=535.84 Aligned_cols=462 Identities=27% Similarity=0.471 Sum_probs=348.4
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHH--------HHHHcCCCeeEE----EEEecCCCCCCCCCcCC
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELA--------RALARMPGVYRV----DLFSRQVSSPEVDWSYG 230 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA--------~aLa~~G~v~~V----~v~t~~~~~~~~~~~y~ 230 (1067)
+|-|||++||.||++++.+ ++|+ ||||||..||.+|| ++|+++| |+| +|+||.+.+.. ...|.
T Consensus 277 p~~~~i~~iS~Hg~~~~~~-~lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~G--~~v~~~v~i~TR~i~~~~-~~~~~ 351 (815)
T PLN00142 277 PMVFNVVIFSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKQQG--LDIKPQILIVTRLIPDAK-GTTCN 351 (815)
T ss_pred hHhHhhheecccccccccc-cCCC-CCCCCceehHHHHHHHHHHHHHHHHHhcC--CCccceeEEEEeccCCcc-CCccc
Confidence 5668999999999999999 5998 99999999998777 5666788 866 59999886554 45566
Q ss_pred CcccccCCCCCCCCccccccCCeEEEeccCCCCc----cCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCc
Q 001492 231 EPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRD----KYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWP 306 (1067)
Q Consensus 231 ~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~----~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~p 306 (1067)
++.|.. ...++++|+|+||+|.. +|++|+.+|||+..|.+.+..++.+. ...+|
T Consensus 352 ~~~e~v-----------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~-----------~~~~P 409 (815)
T PLN00142 352 QRLEKV-----------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAE-----------LQGKP 409 (815)
T ss_pred Ccceec-----------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCCC
Confidence 655544 33569999999999952 57799999999999999888776541 12469
Q ss_pred eEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHH
Q 001492 307 YVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQ 386 (1067)
Q Consensus 307 DvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~ 386 (1067)
|+||+|||+++++|..+++.+|+|+|+|.|+++..++. . +...+.+....|++..|+.+|..++..||.||++|.+
T Consensus 410 DlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~-~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~q 485 (815)
T PLN00142 410 DLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---D-SDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQ 485 (815)
T ss_pred CEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---c-cCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHH
Confidence 99999999999999999999999999999999887752 2 2235556778899999999999999999999999999
Q ss_pred HHH------HHHhhcCCCc-hHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCC
Q 001492 387 EID------EQWGLYDGFD-VKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGS 459 (1067)
Q Consensus 387 ~~~------~~~~~y~~~~-~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 459 (1067)
++. .||..|..|. |.+ +|+-.|+ +.+.+++.|||||+|...|.|.... ...+..+..+++.
T Consensus 486 Ei~g~~~~i~qy~sh~~f~~p~L-----~rvv~GI---d~~~~ki~VVppGvD~~~F~P~~~~---~~rl~~l~n~I~~- 553 (815)
T PLN00142 486 EIAGSKDTVGQYESHTAFTLPGL-----YRVVHGI---DVFDPKFNIVSPGADMSIYFPYTEK---QKRLTSLHPSIEE- 553 (815)
T ss_pred HHhcccchhhhhhcccccccchh-----hhhhccc---cccccCeeEECCCCChhhcCCCChH---HhhHHhhcccchh-
Confidence 986 3455544332 322 2333444 3356699999999999998865421 0111111100000
Q ss_pred CCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecC-CChhhhhccchHHHHHH
Q 001492 460 SPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNR-DDIEEMSSGNASVLITV 538 (1067)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~-~~~~~l~~~~~~~~~~i 538 (1067)
..-.+........+...+++|+|+++||+++.||++.|++|++.+.+++...++ +|+|++ +.......+......++
T Consensus 554 -~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~L 631 (815)
T PLN00142 554 -LLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKKM 631 (815)
T ss_pred -hcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHHH
Confidence 000111111222233456788999999999999999999999988644333333 366665 21111111112345678
Q ss_pred HHHHHhcCCCCcEEeCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCce
Q 001492 539 LKLIDKYDLYGQVAYPKHHK-QYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNG 617 (1067)
Q Consensus 539 ~~l~~~~~l~~~V~~~g~~~-~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~G 617 (1067)
..+++++++.++|.|.|.+. ..+..++|+..+.+.|+||+||++|+||++++||||||+|||+|+.||+.|+|.++.+|
T Consensus 632 ~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG 711 (815)
T PLN00142 632 HSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSG 711 (815)
T ss_pred HHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcE
Confidence 89999999999999998654 33444555422212299999999999999999999999999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHh----hcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHH
Q 001492 618 LLVDPHDQQAIADALLKL----VSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~l----l~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 669 (1067)
++|+|+|+++++++|.++ ++|++.|++++++|++++ ++|||+.++++++++.
T Consensus 712 ~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 712 FHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred EEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999998765 479999999999999998 6999999999999876
No 4
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=2.2e-53 Score=504.22 Aligned_cols=438 Identities=53% Similarity=0.884 Sum_probs=344.8
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
+||++||.||+++++++.+|++|+.||+++|+.+|+++|+++|++|+|+|+|+....+.+...|+.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~----------- 69 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIE----------- 69 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCee-----------
Confidence 589999999999999999999999999999999999999999933399999986433322223332221
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
...+|+.++|+|+++. .+..+..+|+++..|...+...+.+ ...+|||||+|++.++.++.++++
T Consensus 70 --~~~~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~~DvIH~h~~~~~~~~~~~~~ 134 (439)
T TIGR02472 70 --RIAPGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQ------------QGHLPDLIHAHYADAGYVGARLSR 134 (439)
T ss_pred --EeCCCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHH------------cCCCCCEEEEcchhHHHHHHHHHH
Confidence 1236999999998776 5666667788877666655554432 013599999999888888888999
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|+|.|+++......+...+. ....+...|++..++..|+.+++.+|.||++|..++.+.+..+.++++
T Consensus 135 ~~~~p~V~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~----- 208 (439)
T TIGR02472 135 LLGVPLIFTGHSLGREKRRRLLAAGL-KPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP----- 208 (439)
T ss_pred HhCCCEEEecccccchhhhhcccCCC-ChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCc-----
Confidence 99999999999875543322222222 222333445556666678889999999999998776665544433333
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
.++.+||||+|.+.|.+..... ........++++...+++++|++
T Consensus 209 ----------------~ki~vIpnGvd~~~f~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~i~~ 253 (439)
T TIGR02472 209 ----------------ERMQVIPPGVDLSRFYPPQSSE-------------------ETSEIDNLLAPFLKDPEKPPILA 253 (439)
T ss_pred ----------------cceEEECCCcChhhcCCCCccc-------------------cchhHHHHHHhhccccCCcEEEE
Confidence 3899999999999987653100 00111223344445667889999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
+||+.+.||++.|++||..+..+...+++.+|+|++++.+.+.....++..++..+++++++.++|.|+|+++.++++.+
T Consensus 254 vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~ 333 (439)
T TIGR02472 254 ISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPEL 333 (439)
T ss_pred EcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHH
Confidence 99999999999999999876433445667677898877666655445567778889999999999999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHH
Q 001492 566 YRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVEC 645 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~ 645 (1067)
|+.|+...|+||+||..|+||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++++++|.++++++++++++
T Consensus 334 ~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~ 413 (439)
T TIGR02472 334 YRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLW 413 (439)
T ss_pred HHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 99875555899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 646 RKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 646 ~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
++++++.+ ++|||+.++++|+++++
T Consensus 414 ~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 414 SRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999998 59999999999998863
No 5
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=3.9e-50 Score=501.17 Aligned_cols=591 Identities=15% Similarity=0.170 Sum_probs=401.4
Q ss_pred ccccccchhHHHH----------HHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeC
Q 001492 268 RKELLWPYIQEFV----------DGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGH 336 (1067)
Q Consensus 268 ~k~~l~~~l~~f~----------~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H 336 (1067)
.+..+||.+..+. ......-..++.++.+.+.. -|+|..|+.-...++..+.++ ...++-+..|
T Consensus 91 ~n~~lWp~~H~~~~~~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-----~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH 165 (726)
T PRK14501 91 CNSTLWPLFHYFPEYTEFEDRFWESYERVNQRFAEAIAAIARP-----GDVVWVHDYQLMLLPAMLRERLPDARIGFFLH 165 (726)
T ss_pred hhccccchhcccCcccCcCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEEEeCchhhhHHHHHHhhCCCCcEEEEee
Confidence 3556777654321 22223334456666665432 489999987666666666554 3578999999
Q ss_pred CCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHH-hcCcc
Q 001492 337 SLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARA-RRGVN 415 (1067)
Q Consensus 337 ~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~-~~Gv~ 415 (1067)
-.++..- -+ .. ++ ..-.+ -..+-.+|.|-..+......+.... .+.|+... ..++.
T Consensus 166 ~pfP~~~-~f-~~--lp-----~~~~l-------l~~ll~~Dligf~t~~~~r~Fl~~~-------~~~l~~~~~~~~~~ 222 (726)
T PRK14501 166 IPFPSFE-VF-RL--LP-----WREEI-------LEGLLGADLIGFHTYDYVRHFLSSV-------LRVLGYETELGEIR 222 (726)
T ss_pred CCCCChH-HH-hh--CC-----ChHHH-------HHHHhcCCeEEeCCHHHHHHHHHHH-------HHHcCCccCCCeEE
Confidence 8866441 11 00 01 01112 2346789999999998887765532 22222111 12344
Q ss_pred cCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCH
Q 001492 416 CHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNI 495 (1067)
Q Consensus 416 ~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi 495 (1067)
..|+.. ++.++|+|||++.|.+....+++....+. ++. ..+++++|+++||+++.||+
T Consensus 223 ~~gr~~-~v~v~p~GID~~~f~~~~~~~~~~~~~~~-------------------lr~--~~~~~~~il~VgRl~~~Kgi 280 (726)
T PRK14501 223 LGGRIV-RVDAFPMGIDYDKFHNSAQDPEVQEEIRR-------------------LRQ--DLRGRKIILSIDRLDYTKGI 280 (726)
T ss_pred ECCEEE-EEEEEECeEcHHHHHHHhcCchHHHHHHH-------------------HHH--HcCCCEEEEEecCcccccCH
Confidence 445543 79999999999999865422222111111 111 13567899999999999999
Q ss_pred HHHHHHHHhcccccCCCc----EEE-EEe--cC---CChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 496 TTLLKAFGECRPLRELAN----LTL-IMG--NR---DDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 496 ~~ll~A~~~l~~l~~~~~----l~l-IvG--~~---~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
..+++||+.+. +..|+ +.+ ++| .+ +++++++....+..++|+...+..++.+.++|.+++++++++++
T Consensus 281 ~~~l~A~~~ll--~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~l 358 (726)
T PRK14501 281 PRRLLAFERFL--EKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVAL 358 (726)
T ss_pred HHHHHHHHHHH--HhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHH
Confidence 99999999984 45554 333 444 22 44566666666667777777777778788889999999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCH-
Q 001492 566 YRLAAKTKGVFINPALVEPFGLTLIEAAAH-----GLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEK- 639 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~~EgfgltllEAmA~-----G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~- 639 (1067)
|+.| ||||+||++|||||+++||||| |+||+++..|++.+++ .|++|+|+|++++|++|.++++++
T Consensus 359 y~~a----Dv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~~~~ 430 (726)
T PRK14501 359 YRAA----DVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAAIKRALEMPE 430 (726)
T ss_pred HHhc----cEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHHHHHHHcCCH
Confidence 9999 9999999999999999999999 6689999999999884 499999999999999999999975
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhcCCCCCCCCcchhhhhhhcccccchhhhhhhccccccCCCCCCCC
Q 001492 640 NLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLN 719 (1067)
Q Consensus 640 ~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~~~~~~~~ 719 (1067)
+.+.+..+++++.+..|||..|+++|++.|+++...+....... +
T Consensus 431 ~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~---------------------~-------------- 475 (726)
T PRK14501 431 EEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFASKP---------------------I-------------- 475 (726)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcccccc---------------------C--------------
Confidence 44555556788888899999999999999998865432111000 0
Q ss_pred CCCcccccCCCCchhhHHHHHHhhccCCCCCCcchHHHHhhhhcccccCcccccCCeEEEEEEeCCCCCCCC-----chh
Q 001492 720 GSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAP-----DKK 794 (1067)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~klllia~DiDGTLl~~-----~~~ 794 (1067)
+....+.++.+|+++++ |++++ |+||||++. ...
T Consensus 476 -------------~~~~~~~~~~~y~~~~~--------------------------rLi~~--D~DGTL~~~~~~~~~~~ 514 (726)
T PRK14501 476 -------------TPAAAEEIIARYRAASR--------------------------RLLLL--DYDGTLVPFAPDPELAV 514 (726)
T ss_pred -------------CccCHHHHHHHHHhccc--------------------------eEEEE--ecCccccCCCCCcccCC
Confidence 01335667788876655 65555 999997752 245
Q ss_pred hHHHHHHHHHHHHhc-CCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCCCcccCCcCCCChhh
Q 001492 795 MIQIMYDVFKAVRLD-HQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDY 873 (1067)
Q Consensus 795 i~~~~~~al~~l~~~-g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~ 873 (1067)
+++.++++|++|.++ | + .|+|+|||++..+.+++..+++ ++|++||++++.+++.-. . ....+..|
T Consensus 515 ~~~~~~~~L~~L~~d~g----~-~V~ivSGR~~~~l~~~~~~~~l------~liaenG~~i~~~~~~w~-~-~~~~~~~w 581 (726)
T PRK14501 515 PDKELRDLLRRLAADPN----T-DVAIISGRDRDTLERWFGDLPI------HLVAEHGAWSRAPGGEWQ-L-LEPVATEW 581 (726)
T ss_pred CCHHHHHHHHHHHcCCC----C-eEEEEeCCCHHHHHHHhCCCCe------EEEEeCCEEEeCCCCceE-E-CCCcchhH
Confidence 789999999999995 4 6 7999999999999999987543 699999999986532111 0 00112334
Q ss_pred hhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCch---HHHHHHHHHHHhc--CCc
Q 001492 874 ASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKA---RRIDDLRQKLRMR--GLR 948 (1067)
Q Consensus 874 ~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~---~~~~el~~~L~~~--~~~ 948 (1067)
...+ ...+..+..+.++++.+.+ ..+++|++...+.. ...+++.+.+... ...
T Consensus 582 ~~~v-----~~il~~~~~~~~gs~ie~k-----------------~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~ 639 (726)
T PRK14501 582 KDAV-----RPILEEFVDRTPGSFIEEK-----------------EASLAWHYRNADPELGEARANELILALSSLLSNAP 639 (726)
T ss_pred HHHH-----HHHHHHHHhcCCCcEEEEc-----------------ceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3322 1122222223333332221 35677877554311 1133455555432 223
Q ss_pred EEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCC---ceEEEeCCCcccchhhhhc
Q 001492 949 CHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA---HKTLIMKGVVEKGSEELLR 1025 (1067)
Q Consensus 949 ~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~a---g~gVaMgNA~e~~~~~~~~ 1025 (1067)
+.++ +++ .++||+|+++|||.|+++|++ +++++.+++ |||+.| | ++||+.+ +++|+|||+...
T Consensus 640 ~~v~-~g~-~~veV~p~~vnKG~al~~ll~--~~~~d~vl~-~GD~~n-D-e~Mf~~~~~~~~~v~vG~~~s~------- 705 (726)
T PRK14501 640 LEVL-RGN-KVVEVRPAGVNKGRAVRRLLE--AGPYDFVLA-IGDDTT-D-EDMFRALPETAITVKVGPGESR------- 705 (726)
T ss_pred eEEE-ECC-eEEEEEECCCCHHHHHHHHHh--cCCCCEEEE-ECCCCC-h-HHHHHhcccCceEEEECCCCCc-------
Confidence 4433 344 599999999999999999999 777888888 999999 9 9999986 799999997621
Q ss_pred ccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhh
Q 001492 1026 TTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 1026 a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
+.|...++ +++...|+.+
T Consensus 706 ---------------A~~~l~~~--~eV~~~L~~l 723 (726)
T PRK14501 706 ---------------ARYRLPSQ--REVRELLRRL 723 (726)
T ss_pred ---------------ceEeCCCH--HHHHHHHHHH
Confidence 22665544 6688888775
No 6
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=4.8e-46 Score=462.66 Aligned_cols=549 Identities=13% Similarity=0.117 Sum_probs=384.3
Q ss_pred HHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhH
Q 001492 289 NMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRI 367 (1067)
Q Consensus 289 ~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri 367 (1067)
.++.++.+.+.. -|+|-.|..-...+..++.+. ...++.+..|..++..- -+.. ++. .-.+
T Consensus 136 ~FA~~i~~~~~~-----~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e-~fr~---lp~-----r~~i---- 197 (797)
T PLN03063 136 MFLDVVKENYEE-----GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSE-IYKT---LPS-----RSEL---- 197 (797)
T ss_pred HHHHHHHHhcCC-----CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHH-HHhh---CCC-----HHHH----
Confidence 445555554431 379999987555566666554 46899999998876541 1100 010 1112
Q ss_pred HHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHH-HhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccc
Q 001492 368 EGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRAR-ARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVD 446 (1067)
Q Consensus 368 ~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~-~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~ 446 (1067)
-..+-.||.|-+.|...+..+.... .+.|+.. ...++...|+.. ++.+||+|||++.|.+....+++.
T Consensus 198 ---l~gll~aDligF~t~~y~r~Fl~~~-------~r~l~~~~~~~~i~~~gr~~-~I~viP~GID~~~f~~~~~~~~~~ 266 (797)
T PLN03063 198 ---LRAVLTADLIGFHTYDFARHFLSAC-------TRILGVEGTHEGVVDQGKVT-RVAVFPIGIDPERFINTCELPEVK 266 (797)
T ss_pred ---HHHHhcCCEEEeCCHHHHHHHHHHH-------HHHhCccccCCceEECCeEE-EEEEEecccCHHHHHHHhcChhHH
Confidence 2346789999999999888876532 1222211 123455445544 899999999999887654222211
Q ss_pred cccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EEEE-E---
Q 001492 447 GELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTLI-M--- 518 (1067)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~lI-v--- 518 (1067)
... ..++.. .+++++|+++||+++.||+..+++||+.+. ..+|+ ++|+ +
T Consensus 267 ~~~-------------------~~lr~~--~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL--~~~P~~~~kvvLvqia~p 323 (797)
T PLN03063 267 QHM-------------------KELKRF--FAGRKVILGVDRLDMIKGIPQKYLAFEKFL--EENPEWRDKVMLVQIAVP 323 (797)
T ss_pred HHH-------------------HHHHHh--cCCCeEEEEecccccccCHHHHHHHHHHHH--HhCccccCcEEEEEEecC
Confidence 111 111111 246789999999999999999999999984 45554 3333 2
Q ss_pred --ecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcC
Q 001492 519 --GNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHG 596 (1067)
Q Consensus 519 --G~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G 596 (1067)
|+++.+++++....+...+|+..++..++.+.+++.++++.+++.++|+.| ||||+||++|||||+++||||||
T Consensus 324 sr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g 399 (797)
T PLN03063 324 TRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQ 399 (797)
T ss_pred CCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheee
Confidence 233456666665566656666666667788888888899999999999999 99999999999999999999999
Q ss_pred CC----EEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 597 LP----MVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 597 ~P----VVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
+| +|+|..+|..+.+ +.+|++|+|+|++++|++|.++|+ +++++++..+..++++..|+|..|++.|++.|.+
T Consensus 400 ~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 400 KAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELND 477 (797)
T ss_pred cCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHH
Confidence 98 9999888887775 457999999999999999999999 6677778888888889999999999999999988
Q ss_pred hHhcCCCCCCCCcchhhhhhhcccccchhhhhhhccccccCCCCCCCCCCCcccccCCCCchhhHHHHHHhhccCCCCCC
Q 001492 672 CRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDS 751 (1067)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1067)
+...+....... + .....+.++.+|+++++
T Consensus 478 ~~~~~~~~~~~~---------------------~---------------------------~~l~~~~~~~~y~~a~~-- 507 (797)
T PLN03063 478 IIVEAELRTRNI---------------------P---------------------------LELPEQDVIQQYSKSNN-- 507 (797)
T ss_pred HhhhhhhcccCC---------------------C---------------------------CCCCHHHHHHHHHhccC--
Confidence 765432111000 0 01334567888887665
Q ss_pred cchHHHHhhhhcccccCcccccCCeEEEEEEeCCCCCCCC--------chhhHHHHHHHHHHHHhcCCCCceeEEEEECC
Q 001492 752 NDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAP--------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTA 823 (1067)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~r~klllia~DiDGTLl~~--------~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTG 823 (1067)
+++|+ |+||||... +..+++.+.++|++|.++. + . .|+|+||
T Consensus 508 ------------------------rll~L--DyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~--~-~-~V~IvSG 557 (797)
T PLN03063 508 ------------------------RLLIL--GFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDP--K-T-TVVVLSR 557 (797)
T ss_pred ------------------------eEEEE--ecCccccCCCCCccccccCCCCHHHHHHHHHHHcCC--C-C-EEEEEeC
Confidence 76666 999996532 1237789999999999884 3 4 5999999
Q ss_pred CCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCC
Q 001492 824 MPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENS 903 (1067)
Q Consensus 824 R~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~ 903 (1067)
|+...+..++...++ ++++++|+++..+++.-........+..|...+ ...++.+..++++++.+.|
T Consensus 558 R~~~~L~~~~~~~~l------~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v-----~~~l~~~~~rtpGs~iE~K-- 624 (797)
T PLN03063 558 SGKDILDKNFGEYNI------WLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGV-----KNVFKYFTDRTPRSYVEKS-- 624 (797)
T ss_pred CCHHHHHHHhCCCCC------cEEEeCCEEEecCCCceeeccccccChhHHHHH-----HHHHHHHHHhCCCcEEEEc--
Confidence 999999999987554 599999998764421100000011234565554 3567778888999888877
Q ss_pred CCCCCCcccccccCCceEEEEEecCCCch---HHHHHHHHHHHhc---CCcEEEEEeeCCeeEEEecCCCCHHHHHHHHH
Q 001492 904 KNSSSPIQEDQKSSNAHCISYLIKDPSKA---RRIDDLRQKLRMR---GLRCHPMYCRNSTRMQIVPLLASRSQALRYLF 977 (1067)
Q Consensus 904 ~~~~~~~~~~~~~~~~~ki~~~~~~~~~~---~~~~el~~~L~~~---~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~ 977 (1067)
.+.++||++..+.. ....++.+.+... ...+.++ .+...+||.|.++|||.|++.|+
T Consensus 625 ---------------~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~--~Gk~vvEvrp~gvnKG~Av~~ll 687 (797)
T PLN03063 625 ---------------ETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVV--RGQKSVEVHAIGVTKGAAIGRIL 687 (797)
T ss_pred ---------------CeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEE--ECCeEEEEEcCCCChHHHHHHHH
Confidence 56889999765321 3455666665221 2234443 34459999999999999999999
Q ss_pred HHh------CCCcccEEEEecCC-CCCChhhhhcCCce
Q 001492 978 VRW------RLNVANMFVILGES-GDTDYEELISGAHK 1008 (1067)
Q Consensus 978 ~~~------gi~~e~vva~fGDs-~N~D~~eML~~ag~ 1008 (1067)
+++ +-+.+ ++.++||. ++ | ++||+..+-
T Consensus 688 ~~~~~~~~~~~~~d-fvl~~Gdd~~~-D-EdmF~~l~~ 722 (797)
T PLN03063 688 GEIVHNKSMTTPID-FVFCSGYFLEK-D-EDVYTFFEP 722 (797)
T ss_pred HHhhhccccCCCCC-EEEEeCCCCCC-c-HHHHHhccc
Confidence 986 22334 45449998 46 9 999997753
No 7
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=4.2e-44 Score=440.97 Aligned_cols=547 Identities=14% Similarity=0.149 Sum_probs=392.0
Q ss_pred HHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhH
Q 001492 289 NMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRI 367 (1067)
Q Consensus 289 ~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri 367 (1067)
.++.++.+.+.. -|+|-+|..-...+..++.+. ...++-|.+|..++.. +.+ +.+-.-
T Consensus 220 ~FA~~i~~~~~~-----gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~-Eif---------------r~LP~r 278 (934)
T PLN03064 220 MFADVVNEHYEE-----GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSS-EIH---------------RTLPSR 278 (934)
T ss_pred HHHHHHHHhcCC-----CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCCh-HHH---------------hhCCcH
Confidence 355555554431 379999987656666666554 4578999999876644 111 111111
Q ss_pred HHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHH-HhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccc
Q 001492 368 EGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRAR-ARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVD 446 (1067)
Q Consensus 368 ~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~-~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~ 446 (1067)
+.--..+-.||.|-+.|..++..+.... .+.|+.. ...||...|+.. ++.++|.|||++.|......+++.
T Consensus 279 ~elL~glL~aDlIGFqT~~y~rhFl~~c-------~rlLg~~~~~~~v~~~Gr~v-~V~~~PiGID~~~f~~~~~~~~v~ 350 (934)
T PLN03064 279 SELLRSVLAADLVGFHTYDYARHFVSAC-------TRILGLEGTPEGVEDQGRLT-RVAAFPIGIDSDRFIRALETPQVQ 350 (934)
T ss_pred HHHHHHHhcCCeEEeCCHHHHHHHHHHH-------HHHhCccccCCeEEECCEEE-EEEEEeCEEcHHHHHHHhcChhHH
Confidence 1112346789999999999888876532 2333322 123566666655 799999999999998665333333
Q ss_pred cccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcE----EEE---Ee
Q 001492 447 GELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANL----TLI---MG 519 (1067)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l----~lI---vG 519 (1067)
..++.+ ..++ .++++|++++|+|+.|||...++||+.+ |..+|.+ +|| ++
T Consensus 351 ~~~~~l------------------r~~~---~g~kiIlgVDRLD~~KGI~~kL~AfE~f--L~~~Pe~r~kVVLvQIa~p 407 (934)
T PLN03064 351 QHIKEL------------------KERF---AGRKVMLGVDRLDMIKGIPQKILAFEKF--LEENPEWRDKVVLLQIAVP 407 (934)
T ss_pred HHHHHH------------------HHHh---CCceEEEEeeccccccCHHHHHHHHHHH--HHhCccccCCEEEEEEcCC
Confidence 332221 1222 4678999999999999999999999998 4555653 222 23
Q ss_pred ---cCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-
Q 001492 520 ---NRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH- 595 (1067)
Q Consensus 520 ---~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~- 595 (1067)
+.+++++++.+..+.+.+|+..+...++.+.+++...++++++.++|+.| ||||+||++|||||+++|||||
T Consensus 408 sr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 408 TRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhh
Confidence 44568888888899999999999999999989899999999999999999 9999999999999999999999
Q ss_pred ----CCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 596 ----GLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 596 ----G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
|++||+...|+..++ +..|++|||+|++++|++|.++|+ +++++++..+..++.+..|||..|++.|++.+.
T Consensus 484 ~~~~GvLILSEfaGaa~~L---~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~ 560 (934)
T PLN03064 484 DSKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELN 560 (934)
T ss_pred cCCCCCeEEeCCCchHHHh---CCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHH
Confidence 788886666666555 346999999999999999999999 677888888888899999999999999999888
Q ss_pred HhHhcCCCCCCCCcchhhhhhhcccccchhhhhhhccccccCCCCCCCCCCCcccccCCCCchhhHHHHHHhhccCCCCC
Q 001492 671 ACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSD 750 (1067)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1067)
.+...+....... ......+.++.+|+++.+
T Consensus 561 ~~~~~~~~~~~~~------------------------------------------------~~~l~~~~~~~~y~~a~~- 591 (934)
T PLN03064 561 DTVVEAQLRTRQV------------------------------------------------PPQLPPEDAIQRYLQSNN- 591 (934)
T ss_pred HHHhhhhcccccc------------------------------------------------CCCCCHHHHHHHHHhccc-
Confidence 7754321110000 002345667888887665
Q ss_pred CcchHHHHhhhhcccccCcccccCCeEEEEEEeCCCCCCC----Cc----------hhhHHHHHHHHHHHHhcCCCCcee
Q 001492 751 SNDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGA----PD----------KKMIQIMYDVFKAVRLDHQTARVT 816 (1067)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~r~klllia~DiDGTLl~----~~----------~~i~~~~~~al~~l~~~g~~g~i~ 816 (1067)
+++|+ |.||||.. |+ ..+++.++++|++|.++. +.
T Consensus 592 -------------------------RLlfL--DyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp---~n- 640 (934)
T PLN03064 592 -------------------------RLLIL--GFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDP---KT- 640 (934)
T ss_pred -------------------------eEEEE--ecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCC---CC-
Confidence 76666 99999653 22 236688999999999884 34
Q ss_pred EEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhc
Q 001492 817 GFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNT 896 (1067)
Q Consensus 817 ~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~ 896 (1067)
.|+|+|||+...+..+|..+++ ++++++|+++..+++.-........+..|...+ ...++.+..+++++
T Consensus 641 ~VaIVSGR~~~~Le~~fg~~~L------~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v-----~~ile~~~eRtPGS 709 (934)
T PLN03064 641 TIVVLSGSDRSVLDENFGEFDM------WLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSV-----KHVFEYFTERTPRS 709 (934)
T ss_pred eEEEEeCCCHHHHHHHhCCCCc------eEEeeCCeEEecCCCcceeccccccchHHHHHH-----HHHHHHHHhcCCCc
Confidence 6999999999999999988655 699999999765431100000111234566555 35577788889998
Q ss_pred ccCCCCCCCCCCCcccccccCCceEEEEEecCCC---chHHHHHHHHHHHhc---CCcEEEEEeeCCeeEEEecCCCCHH
Q 001492 897 TEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPS---KARRIDDLRQKLRMR---GLRCHPMYCRNSTRMQIVPLLASRS 970 (1067)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~---~~~~~~el~~~L~~~---~~~~~v~~s~~~~~lEI~p~gasKg 970 (1067)
+.+.| .+.++||++..+ ......++.+.+... ...+.++ .+..++||.|.++|||
T Consensus 710 ~IE~K-----------------~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~--~Gk~VVEVrP~gvnKG 770 (934)
T PLN03064 710 HFETR-----------------ETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVV--QGSRSVEVRPVGVTKG 770 (934)
T ss_pred EEEEc-----------------CcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEE--eCCeEEEEEcCCCCHH
Confidence 88877 468889987653 122355666666321 2234443 3445999999999999
Q ss_pred HHHHHHHHHhC------CCcccEEEEecCCCCCChhhhhcCC
Q 001492 971 QALRYLFVRWR------LNVANMFVILGESGDTDYEELISGA 1006 (1067)
Q Consensus 971 ~AL~~L~~~~g------i~~e~vva~fGDs~N~D~~eML~~a 1006 (1067)
.|++.|+.++. -++ ++|.++||+..|| ++||+..
T Consensus 771 ~Av~~ll~~~~~~~~~~~~~-DFvlc~GDd~~~D-EdmF~~l 810 (934)
T PLN03064 771 AAIDRILGEIVHSKSMTTPI-DYVLCIGHFLGKD-EDIYTFF 810 (934)
T ss_pred HHHHHHHHhhhhccccCCCC-CEEEEeCCCCCCc-HHHHHHH
Confidence 99999999762 123 4555599987569 9999965
No 8
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=4e-43 Score=435.80 Aligned_cols=566 Identities=14% Similarity=0.134 Sum_probs=387.6
Q ss_pred HHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHh
Q 001492 288 LNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRR 366 (1067)
Q Consensus 288 ~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~r 366 (1067)
..++.++.+.+..+ -|+|-.|..-...+..++.++ ...++.|..|..++..- + |+.+-.
T Consensus 188 ~~FA~~v~~~~~~~----~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e--i--------------fr~LP~ 247 (854)
T PLN02205 188 KIFADRIMEVINPE----DDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--I--------------YKTLPI 247 (854)
T ss_pred HHHHHHHHHHhCCC----CCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH--H--------------HhhCCc
Confidence 34555555544310 279999987555566666554 45789999998866441 1 111111
Q ss_pred HHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHh-----cCcccCCCCCCCEEEeCCCCCCCCccCCCC
Q 001492 367 IEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARAR-----RGVNCHGRYMPRMVVIPPGMDFSNVVAQED 441 (1067)
Q Consensus 367 i~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~-----~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~ 441 (1067)
.+.--..+-.||.|-..|..++..+... ..+.|+.... .|+...|+.. ++.++|.|||+..|.....
T Consensus 248 r~eiL~glL~aDlIGFht~~yar~Fl~~-------~~r~lgl~~~~~~g~~~~~~~Gr~v-~v~~~PigId~~~~~~~~~ 319 (854)
T PLN02205 248 REELLRALLNSDLIGFHTFDYARHFLSC-------CSRMLGLSYESKRGYIGLEYYGRTV-SIKILPVGIHMGQLQSVLS 319 (854)
T ss_pred HHHHHHHHhcCCeEEecCHHHHHHHHHH-------HHHHhCCcccCCCcceeEEECCcEE-EEEEEeCeEcHHHHHHHhc
Confidence 1111234678999999999998877553 2333433222 2455556666 8999999999998876553
Q ss_pred CCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcE----EE-
Q 001492 442 TPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANL----TL- 516 (1067)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l----~l- 516 (1067)
.+++...+++ ++.-+..+++++|+.++|+|+.|||...+.||+++ |+.+|.+ +|
T Consensus 320 ~~~~~~~~~~-------------------l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~--L~~~P~~~gkvvlv 378 (854)
T PLN02205 320 LPETEAKVKE-------------------LIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQL--LMQHPEWQGKVVLV 378 (854)
T ss_pred ChhHHHHHHH-------------------HHHHhccCCCEEEEEccCcccccCHHHHHHHHHHH--HHhCccccCCEEEE
Confidence 3333332222 22222224678999999999999999999999999 4666653 32
Q ss_pred --EEecC---CChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHH
Q 001492 517 --IMGNR---DDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIE 591 (1067)
Q Consensus 517 --IvG~~---~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllE 591 (1067)
++..+ +++++++.+..+.+++||..+.+.++.+.+++...++++++.++|+.| ||++++|+++||+|+.+|
T Consensus 379 Qia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A----Dv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 379 QIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVA----ECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhc----cEEEeccccccccccchh
Confidence 33444 678889999999999999999999999988889999999999999999 999999999999999999
Q ss_pred HHHc--------------------CCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHH-HHHH
Q 001492 592 AAAH--------------------GLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECR-KNGW 650 (1067)
Q Consensus 592 AmA~--------------------G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~-~~~~ 650 (1067)
|+|| |+.||+..+|+..++ ..+++|||+|++++|+||.++|++|...++.+ +..+
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L----~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~ 530 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL----SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHY 530 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh----CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9987 678999999998888 35899999999999999999999775555444 4455
Q ss_pred HHHHcCCHHHHHHHHHHHHHHhHhcCCCCCCCCcchhhhhhhcccccchhhhhhhccccccCCCCCCCCCCCcccccCCC
Q 001492 651 KNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTAASSG 730 (1067)
Q Consensus 651 ~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1067)
+++..++...|++.|+.-++.....+........ .+.-+.+ .+.+|-
T Consensus 531 ~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~---------g~g~~~~-------~~~~~~----------------- 577 (854)
T PLN02205 531 RYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGI---------GFGLSFR-------VVALDP----------------- 577 (854)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHHHhhhhhccc---------ccccccc-------cccccc-----------------
Confidence 5568999999999999998876443211100000 0000000 000000
Q ss_pred CchhhHHHHHHhhccCCCCCCcchHHHHhhhhcccccCcccccCCeEEEEEEeCCCCCCCCc---hhhHHHHHHHHHHHH
Q 001492 731 DPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLENVVSKYPMLRRRRRLIVIALDCYDSKGAPD---KKMIQIMYDVFKAVR 807 (1067)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~klllia~DiDGTLl~~~---~~i~~~~~~al~~l~ 807 (1067)
.-+....+.++.+|+++.+ |++++ |+||||++.. ..+++.++++|++|.
T Consensus 578 ~~~~l~~~~i~~~y~~~~~--------------------------rlI~L--DyDGTLlp~~~~~~~p~~~~~~~L~~L~ 629 (854)
T PLN02205 578 NFRKLSMEHIVSAYKRTTT--------------------------RAILL--DYDGTLMPQASIDKSPSSKSIDILNTLC 629 (854)
T ss_pred cccccCHHHHHHHHHhhcC--------------------------eEEEE--ecCCcccCCccccCCCCHHHHHHHHHHH
Confidence 0113456778888887655 65554 9999977543 367789999999986
Q ss_pred hcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCCCcccCCcCCCChhhhhccccccccchhH
Q 001492 808 LDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLK 887 (1067)
Q Consensus 808 ~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~ 887 (1067)
++. + + .|+|+|||++.++.++|.... ++ ++|++||+++..++...........+..|...+ ...+.
T Consensus 630 ~d~--g-~-~VaIvSGR~~~~L~~~f~~~~-~l----~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v-----~~i~~ 695 (854)
T PLN02205 630 RDK--N-N-MVFIVSARSRKTLADWFSPCE-KL----GIAAEHGYFLRLKRDVEWETCVPVADCSWKQIA-----EPVMQ 695 (854)
T ss_pred hcC--C-C-EEEEEeCCCHHHHHHHhCCCC-Ce----EEEEeCCEEEEeCCCceeeecchhhhHHHHHHH-----HHHHH
Confidence 553 3 5 699999999999999998742 11 699999999876642111000111133444332 12234
Q ss_pred HHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchH---HHHHHHHHHHhc--CCcEEEEEeeCCeeEEE
Q 001492 888 KTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKAR---RIDDLRQKLRMR--GLRCHPMYCRNSTRMQI 962 (1067)
Q Consensus 888 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~---~~~el~~~L~~~--~~~~~v~~s~~~~~lEI 962 (1067)
.+..+.++++.+.+ ...++||+.+.+... ..+++...+... ...+ .+.++. .++||
T Consensus 696 ~y~ertpGs~IE~K-----------------~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~-~v~~G~-~vvEV 756 (854)
T PLN02205 696 LYTETTDGSTIEDK-----------------ETALVWCYEDADPDFGSCQAKELLDHLESVLANEPV-TVKSGQ-NIVEV 756 (854)
T ss_pred HHhcCCCchhheec-----------------ceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCce-EEEECC-cEEEE
Confidence 44555566666554 567888886553111 123444444322 1122 234444 59999
Q ss_pred ecCCCCHHHHHHHHHH---HhCCCcccEEEEecCCCCCChhhhhcCCc
Q 001492 963 VPLLASRSQALRYLFV---RWRLNVANMFVILGESGDTDYEELISGAH 1007 (1067)
Q Consensus 963 ~p~gasKg~AL~~L~~---~~gi~~e~vva~fGDs~N~D~~eML~~ag 1007 (1067)
.|.++|||.|++.|++ ++|++++.+++ |||+.| | ++||+.++
T Consensus 757 ~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~-~GDD~n-D-edMF~~~~ 801 (854)
T PLN02205 757 KPQGVSKGLVAKRLLSIMQERGMLPDFVLC-IGDDRS-D-EDMFEVIT 801 (854)
T ss_pred EeCCCCHHHHHHHHHHHHHhcCCCcccEEE-EcCCcc-H-HHHHHHhh
Confidence 9999999999999975 46999999988 999999 9 99999875
No 9
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.6e-40 Score=401.38 Aligned_cols=517 Identities=18% Similarity=0.183 Sum_probs=337.9
Q ss_pred hhhhhHHHHH--hhhh-----hhhhcHHHHHHHHHHHHhhhhchhhhhhhhhcccCCCcCCCcccccCCCCCcccccccc
Q 001492 78 LENMCWRIWH--LTRK-----KKQLEWEELQRLANRRLEREQGRRDVTEDMSEDLSEGEKGDGVGEIQTPDTPRKKFQRN 150 (1067)
Q Consensus 78 ~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (1067)
-..|-|.+|- |-|= .+-|--+||.-+-+--|.|+..=+++--+... +.-..+
T Consensus 408 ~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 466 (977)
T PLN02939 408 ADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKG---------------------KNEREA 466 (977)
T ss_pred hhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhc---------------------CchHHH
Confidence 4579999994 2221 22267778877777777777776777666543 222345
Q ss_pred cccccccccccCCCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCC
Q 001492 151 FSNLEVWSDDKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYG 230 (1067)
Q Consensus 151 ~~~~~~~~~~~~~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~ 230 (1067)
.+.+..|....+.++|||++|+.... |+ ..+||..-++..|+++|+++| |+|.|+++.+..-..+...+
T Consensus 467 ~~~~~~~~~~~~~~~mkILfVasE~a----P~-----aKtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~~~~ 535 (977)
T PLN02939 467 VENFLKLTLSGTSSGLHIVHIAAEMA----PV-----AKVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQIRN 535 (977)
T ss_pred HHHHHHhccCCCCCCCEEEEEEcccc----cc-----cccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhhhhc
Confidence 55666777777788999999997664 22 679999999999999999999 99999999764321110000
Q ss_pred Cc---ccc---cCCCCCC-CCccccccCCeEEEeccC-CCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCC
Q 001492 231 EP---AEM---LTGGPED-DGIEVGESSGAYIIRIPF-GPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQ 302 (1067)
Q Consensus 231 ~~---~e~---l~~~~~~-~~~~~~~~~gv~i~ri~~-~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~ 302 (1067)
.. ... .. ++.. +..-....+|+.++.|.. .+. .|..+..++.+-..+ .++.. +.++..+.+...
T Consensus 536 ~~~~~~~~~~~~~-g~~~~~~v~~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~Dn~----~RF~~-FsrAaLe~~~~~- 607 (977)
T PLN02939 536 LKVLDVVVESYFD-GNLFKNKIWTGTVEGLPVYFIEPQHPS-KFFWRAQYYGEHDDF----KRFSY-FSRAALELLYQS- 607 (977)
T ss_pred ccccceEEEEeec-CceeEEEEEEEEECCeeEEEEecCCch-hccCCCCCCCCccHH----HHHHH-HHHHHHHHHHhc-
Confidence 00 000 00 0000 001112235777777742 121 123333333222111 11111 112222222111
Q ss_pred CCCceEEEEcCCchhHHHHHHHh------cCCCcEEEEeCCCchhhH---HHHHhhCCCChhhhh---h-HhHHHHhHHH
Q 001492 303 PVWPYVIHGHYADAGDSAALLSG------ALNVPMVLTGHSLGRNKL---EQLLKQGRQSKEDIN---S-TYKIMRRIEG 369 (1067)
Q Consensus 303 ~~~pDvIh~h~~~a~~~a~~l~~------~~giP~V~t~H~l~~~~~---~~l~~~g~~~~~~i~---~-~y~~~~ri~~ 369 (1067)
..+|||||+|.|.++.++.++.. ..++|+|+|+|++..... ..+-..|. +...+. . ...+..++..
T Consensus 608 ~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL-~~~~l~~~d~le~~~~~~iN~ 686 (977)
T PLN02939 608 GKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGL-DVHQLDRPDRMQDNAHGRINV 686 (977)
T ss_pred CCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCC-CHHHccChhhhhhccCCchHH
Confidence 25799999999988887554432 245899999999853221 11111111 111110 0 0001223333
Q ss_pred hhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcc-cCCCCCCCEEEeCCCCCCCCccCCCCCCccccc
Q 001492 370 EELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVN-CHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGE 448 (1067)
Q Consensus 370 E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~-~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~ 448 (1067)
-+..+..||.|+|+|+.+.+++...+ + .|++ .++.+..++.+||||||++.|.|... ..
T Consensus 687 LK~GIv~AD~VtTVSptYA~EI~te~-G--------------~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD-----~~ 746 (977)
T PLN02939 687 VKGAIVYSNIVTTVSPTYAQEVRSEG-G--------------RGLQDTLKFHSKKFVGILNGIDTDTWNPSTD-----RF 746 (977)
T ss_pred HHHHHHhCCeeEeeeHHHHHHHHHHh-c--------------cchHHHhccccCCceEEecceehhhcCCccc-----cc
Confidence 45567789999999999998876522 1 1221 13445569999999999999987641 11
Q ss_pred cccccCCCCCCCCCCcchhhHhhhhhccC---CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCh
Q 001492 449 LTSLIGGTDGSSPKAIPAIWSDVMRFLTN---PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDI 524 (1067)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~ 524 (1067)
+...+...+...+... ....+.+++.+ ++.|+|++|||+.+.||++.+++|+..+.. .++. +|+|+|++.
T Consensus 747 L~~~Ys~~dl~GK~~n--K~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~----~dvqLVIvGdGp~~ 820 (977)
T PLN02939 747 LKVQYNANDLQGKAAN--KAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE----LGGQFVLLGSSPVP 820 (977)
T ss_pred cccccChhhhhhhhhh--hHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh----cCCEEEEEeCCCcH
Confidence 1111111111111111 11233445544 357999999999999999999999988742 2344 588988642
Q ss_pred hhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC
Q 001492 525 EEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604 (1067)
Q Consensus 525 ~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~ 604 (1067)
.+...+..++.+++..++|.|+|.++......+|+.| |+||+||.+||||++++|||+||+|+|++++
T Consensus 821 --------~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~v 888 (977)
T PLN02939 821 --------HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKT 888 (977)
T ss_pred --------HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecC
Confidence 2346677888999988999999998766678999999 9999999999999999999999999999999
Q ss_pred CCchhhhcc---------CCceEEeCCCCHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 605 GGPVDIHRA---------LNNGLLVDPHDQQAIADALLKLVS----EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 605 Gg~~eiv~~---------~~~Gllv~p~d~~~la~aL~~ll~----d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
||..|+|.+ +.+|++|+|.|+++|+++|.+++. +|+.|.+++++++. +.|||+.++++|+++|+.
T Consensus 889 GGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ 966 (977)
T PLN02939 889 GGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQR 966 (977)
T ss_pred CCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHH
Confidence 999998865 468999999999999999999875 89999999987653 589999999999999999
Q ss_pred hHhc
Q 001492 672 CRMR 675 (1067)
Q Consensus 672 ~~~~ 675 (1067)
++.+
T Consensus 967 ll~~ 970 (977)
T PLN02939 967 AVAR 970 (977)
T ss_pred HHHh
Confidence 8864
No 10
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=1.3e-39 Score=382.78 Aligned_cols=400 Identities=27% Similarity=0.377 Sum_probs=291.5
Q ss_pred EEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccc
Q 001492 168 IVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEV 247 (1067)
Q Consensus 168 I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~ 247 (1067)
|++|+.|.. |...+-..+.||+++|+.+||++|+++| |+|+|+|+....+. + +. .
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~-----~-~~-------------~ 55 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARRG--IEVDIFTRATRPSQ-----P-PV-------------V 55 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccCCCC-----C-Cc-------------c
Confidence 567877775 3333322457999999999999999999 99999997532111 0 00 1
Q ss_pred cccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcC
Q 001492 248 GESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGAL 327 (1067)
Q Consensus 248 ~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~ 327 (1067)
...+|+.+++++.++.. ...+..+...+..|....+. .+..+ ...+|||||+|++..+.++.++++.+
T Consensus 56 ~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~~~~Diih~h~~~~~~~~~~~~~~~ 123 (405)
T TIGR03449 56 EVAPGVRVRNVVAGPYE-GLDKEDLPTQLCAFTGGVLR-------AEARH----EPGYYDLIHSHYWLSGQVGWLLRDRW 123 (405)
T ss_pred ccCCCcEEEEecCCCcc-cCCHHHHHHHHHHHHHHHHH-------HHhhc----cCCCCCeEEechHHHHHHHHHHHHhc
Confidence 22368999998765541 11111111111112211111 11110 11469999999987788888888889
Q ss_pred CCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHH
Q 001492 328 NVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLR 407 (1067)
Q Consensus 328 giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~ 407 (1067)
++|+|+|.|+++..+...+. .+.. ......+ ..|+..+..+|.|+++|+...+.+...+..
T Consensus 124 ~~p~v~t~h~~~~~~~~~~~-~~~~------~~~~~~~--~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~---------- 184 (405)
T TIGR03449 124 GVPLVHTAHTLAAVKNAALA-DGDT------PEPEARR--IGEQQLVDNADRLIANTDEEARDLVRHYDA---------- 184 (405)
T ss_pred CCCEEEeccchHHHHHHhcc-CCCC------CchHHHH--HHHHHHHHhcCeEEECCHHHHHHHHHHcCC----------
Confidence 99999999987532211110 0000 0001111 135667899999999999877766544321
Q ss_pred HHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEe
Q 001492 408 ARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALS 487 (1067)
Q Consensus 408 ~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vg 487 (1067)
+..++.+||||+|.+.|.+... .....++..++++++|+++|
T Consensus 185 ------------~~~ki~vi~ngvd~~~~~~~~~--------------------------~~~~~~~~~~~~~~~i~~~G 226 (405)
T TIGR03449 185 ------------DPDRIDVVAPGADLERFRPGDR--------------------------ATERARLGLPLDTKVVAFVG 226 (405)
T ss_pred ------------ChhhEEEECCCcCHHHcCCCcH--------------------------HHHHHhcCCCCCCcEEEEec
Confidence 2238999999999988864321 01122333456778999999
Q ss_pred CCCCCCCHHHHHHHHHhcccccCCCc--EEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 488 RPDPKKNITTLLKAFGECRPLRELAN--LTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 488 Rld~~Kgi~~ll~A~~~l~~l~~~~~--l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
|+.+.||++.+++|+..+.+ ..++ +.+ |+|+.+... .....++.+++..+++.++|.|+|+++.+++..
T Consensus 227 ~l~~~K~~~~li~a~~~l~~--~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~ 298 (405)
T TIGR03449 227 RIQPLKAPDVLLRAVAELLD--RDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVH 298 (405)
T ss_pred CCCcccCHHHHHHHHHHHHh--hCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHH
Confidence 99999999999999998853 3343 665 777532100 022456778889999999999999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
+|+.| |++++||..|+||++++||||+|+|||+++.||..|++.++.+|++++|+|+++++++|.+++++++.+++
T Consensus 299 ~l~~a----d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~ 374 (405)
T TIGR03449 299 VYRAA----DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIR 374 (405)
T ss_pred HHHhC----CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhH
Q 001492 645 CRKNGWKNIHLFSWPEHCRTYLTRVAACR 673 (1067)
Q Consensus 645 ~~~~~~~~~~~fsw~~~a~~~l~~~~~~~ 673 (1067)
++.++++.+++|||+.++++|+++|.+++
T Consensus 375 ~~~~~~~~~~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 375 MGAAAVEHAAGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 99999998889999999999999999875
No 11
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.7e-39 Score=387.89 Aligned_cols=436 Identities=20% Similarity=0.214 Sum_probs=284.0
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||+|||.+.+ |. ..+||+..+|..|+++|+++| |+|+|+|+.+.. ......... .+... ..+..
T Consensus 1 m~i~~vs~e~~----P~-----~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~--~~~~~~~~~-~~~~~-~~~~~ 65 (466)
T PRK00654 1 MKILFVASECA----PL-----IKTGGLGDVVGALPKALAALG--HDVRVLLPGYPA--IREKLRDAQ-VVGRL-DLFTV 65 (466)
T ss_pred CeEEEEEcccc----cC-----cccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcc--hhhhhcCce-EEEEe-eeEEE
Confidence 89999998876 21 459999999999999999999 999999986532 110000000 00000 00000
Q ss_pred cc--cccCCeEEEeccCCCCccCcccccccchhHH------HHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchh
Q 001492 246 EV--GESSGAYIIRIPFGPRDKYLRKELLWPYIQE------FVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAG 317 (1067)
Q Consensus 246 ~~--~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~------f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~ 317 (1067)
.. ...+|+.+++++.. .+..+..+..+... |...++..+.+ + ..+|||||+|+|.++
T Consensus 66 ~~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~--------~----~~~pDiiH~h~w~~~ 130 (466)
T PRK00654 66 LFGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNGERFAFFSWAAAEFAEG--------L----DPRPDIVHAHDWHTG 130 (466)
T ss_pred EEEeEEcCCceEEEEeCH---HHcCCCCCCCCcChHHHHHHHHHHHHHHHHh--------c----CCCCceEEECCcHHH
Confidence 00 12368888888752 23333334433322 11222221111 1 136999999999999
Q ss_pred HHHHHHHhcC-----CCcEEEEeCCCchhh---HHHHHhhCCCChhhhh-hHhHHHHhHHHhhcccccCCEEEeCCHHHH
Q 001492 318 DSAALLSGAL-----NVPMVLTGHSLGRNK---LEQLLKQGRQSKEDIN-STYKIMRRIEGEELSLDAAELVITSTKQEI 388 (1067)
Q Consensus 318 ~~a~~l~~~~-----giP~V~t~H~l~~~~---~~~l~~~g~~~~~~i~-~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~ 388 (1067)
.++.+++..+ ++|+|+|.|++.... ...+-..|. +..... ..+.+...+...+.++..||.|+|+|+...
T Consensus 131 ~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~ 209 (466)
T PRK00654 131 LIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGL-PAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYA 209 (466)
T ss_pred HHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCC-ChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHH
Confidence 9888887653 799999999985321 011100110 100000 000011122334567899999999999888
Q ss_pred HHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhh
Q 001492 389 DEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIW 468 (1067)
Q Consensus 389 ~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1067)
+++...+.++. +... ++.+..++.+||||||++.|.|... ..+...+...+...+. ....
T Consensus 210 ~ei~~~~~~~g--l~~~-----------~~~~~~ki~vI~NGid~~~~~p~~~-----~~~~~~~~~~~~~~k~--~~k~ 269 (466)
T PRK00654 210 REITTPEFGYG--LEGL-----------LRARSGKLSGILNGIDYDIWNPETD-----PLLAANYSADDLEGKA--ENKR 269 (466)
T ss_pred HHhccccCCcC--hHHH-----------HHhcccCceEecCCCCccccCCccC-----cccccccChhhhhchH--HHHH
Confidence 87654322110 0000 1122348999999999999987541 1111111000000000 0001
Q ss_pred HhhhhhccC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHhcC
Q 001492 469 SDVMRFLTN-PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYD 546 (1067)
Q Consensus 469 ~~~~~~~~~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~ 546 (1067)
..+.++..+ ++.++|+++||+.+.||++.+++|+.++.+ . ++. +|+|+++. .+...+..++.+++
T Consensus 270 ~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~--~--~~~lvivG~g~~---------~~~~~l~~l~~~~~ 336 (466)
T PRK00654 270 ALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE--Q--GGQLVLLGTGDP---------ELEEAFRALAARYP 336 (466)
T ss_pred HHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHh--c--CCEEEEEecCcH---------HHHHHHHHHHHHCC
Confidence 223344444 367899999999999999999999999853 2 344 47787652 23456677777776
Q ss_pred CCCcEEe-CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccC------CceEE
Q 001492 547 LYGQVAY-PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL------NNGLL 619 (1067)
Q Consensus 547 l~~~V~~-~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~------~~Gll 619 (1067)
. ++.+ .|+ +.+.++.+|+.| |+||+||.+||||++++|||+||+|+|+++.||+.|+|.++ .+|++
T Consensus 337 ~--~v~~~~g~-~~~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~l 409 (466)
T PRK00654 337 G--KVGVQIGY-DEALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFV 409 (466)
T ss_pred C--cEEEEEeC-CHHHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEE
Confidence 3 4554 555 445577899999 99999999999999999999999999999999999999888 89999
Q ss_pred eCCCCHHHHHHHHHHhhc---CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Q 001492 620 VDPHDQQAIADALLKLVS---EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 620 v~p~d~~~la~aL~~ll~---d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
|+|.|+++++++|.++++ +++.+.++++++++ +.|||+.++++|+++|++++.
T Consensus 410 v~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 410 FDDFNAEDLLRALRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred eCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 999999999999999887 77888888887753 589999999999999998764
No 12
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=2.3e-38 Score=373.14 Aligned_cols=399 Identities=15% Similarity=0.124 Sum_probs=287.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCC--CcCCCcccccCCCCCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVD--WSYGEPAEMLTGGPEDD 243 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~--~~y~~~~e~l~~~~~~~ 243 (1067)
|||++|+.+++ |+.||.+.++.+|+++|.++| |+|+|+|+....|... ..|....
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~---------- 57 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWR---------- 57 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCccccccc----------
Confidence 79999997766 778999999999999999999 9999999864333221 0111000
Q ss_pred CccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc--hhHHHH
Q 001492 244 GIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD--AGDSAA 321 (1067)
Q Consensus 244 ~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~--a~~~a~ 321 (1067)
...+..+|+.++|+|............+... ..|.... .+.+..++ ..+||+||+|.+. ....+.
T Consensus 58 -~~~~~~~~i~v~r~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~----~~~~Div~~~~p~~~~~~~~~ 124 (412)
T PRK10307 58 -YRRESEGGVTVWRCPLYVPKQPSGLKRLLHL-GSFALSS-------FFPLLAQR----RWRPDRVIGVVPTLFCAPGAR 124 (412)
T ss_pred -ceeeecCCeEEEEccccCCCCccHHHHHHHH-HHHHHHH-------HHHHhhcc----CCCCCEEEEeCCcHHHHHHHH
Confidence 0012246899999986322100000001100 0111111 11111111 1469999999863 355667
Q ss_pred HHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchH
Q 001492 322 LLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVK 401 (1067)
Q Consensus 322 ~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~ 401 (1067)
.+++..++|+|+++|+.+++... ..|.+... ...++... .|+.+++.||.|+++|+...+.+...
T Consensus 125 ~~~~~~~~~~v~~~~d~~~~~~~---~~~~~~~~---~~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~~------- 189 (412)
T PRK10307 125 LLARLSGARTWLHIQDYEVDAAF---GLGLLKGG---KVARLATA--FERSLLRRFDNVSTISRSMMNKAREK------- 189 (412)
T ss_pred HHHHhhCCCEEEEeccCCHHHHH---HhCCccCc---HHHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHHc-------
Confidence 78888999999999998764422 22322111 11222232 37778999999999999887765432
Q ss_pred HHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCc
Q 001492 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKP 481 (1067)
Q Consensus 402 l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1067)
| ....++.+||||+|.+.|.+... . .....+..+...++++
T Consensus 190 -----------~-----~~~~~i~vi~ngvd~~~~~~~~~--~---------------------~~~~~~~~~~~~~~~~ 230 (412)
T PRK10307 190 -----------G-----VAAEKVIFFPNWSEVARFQPVAD--A---------------------DVDALRAQLGLPDGKK 230 (412)
T ss_pred -----------C-----CCcccEEEECCCcCHhhcCCCCc--c---------------------chHHHHHHcCCCCCCE
Confidence 1 11238999999999988865431 0 0001122333456678
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCC
Q 001492 482 MILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQY 560 (1067)
Q Consensus 482 ~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~ 560 (1067)
+|+|+||+.+.||++.|++|+..+. ..+++.+ |+|+++. ...+.+++.++++. +|.|+|+++.+
T Consensus 231 ~i~~~G~l~~~kg~~~li~a~~~l~---~~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G~~~~~ 295 (412)
T PRK10307 231 IVLYSGNIGEKQGLELVIDAARRLR---DRPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLPLQPYD 295 (412)
T ss_pred EEEEcCccccccCHHHHHHHHHHhc---cCCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeCCCCHH
Confidence 9999999999999999999999873 3466665 8898864 34566778888886 79999999999
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCC----CCHHHHHHHHcCCCEEEcCCCC--chhhhccCCceEEeCCCCHHHHHHHHHH
Q 001492 561 DVPEIYRLAAKTKGVFINPALVEP----FGLTLIEAAAHGLPMVATKNGG--PVDIHRALNNGLLVDPHDQQAIADALLK 634 (1067)
Q Consensus 561 dl~~ly~~A~~~~dV~v~ps~~Eg----fgltllEAmA~G~PVVat~~Gg--~~eiv~~~~~Gllv~p~d~~~la~aL~~ 634 (1067)
+++.+|+.| |++|+|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++|+|+++++++|.+
T Consensus 296 ~~~~~~~~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~ 369 (412)
T PRK10307 296 RLPALLKMA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAA 369 (412)
T ss_pred HHHHHHHhc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHH
Confidence 999999999 99999999998 5677899999999999999876 458876 68999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhHhc
Q 001492 635 LVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 635 ll~d~~~~~~~~~~~~~~~~-~fsw~~~a~~~l~~~~~~~~~ 675 (1067)
++++++++++|++++++.++ +|||+.++++|++.|++++..
T Consensus 370 l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 370 LARQALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999994 899999999999999988753
No 13
>PLN02316 synthase/transferase
Probab=100.00 E-value=2.4e-38 Score=391.68 Aligned_cols=424 Identities=17% Similarity=0.130 Sum_probs=280.6
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcc-cccCCCCC
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPA-EMLTGGPE 241 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~-e~l~~~~~ 241 (1067)
.++|+|+|||.+.. |+ ..+||...+|..|+++|+++| |+|.|+|+.+............. ..+.....
T Consensus 585 ~~pM~Il~VSsE~~----P~-----aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~ 653 (1036)
T PLN02316 585 EPPMHIVHIAVEMA----PI-----AKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGGT 653 (1036)
T ss_pred CCCcEEEEEEcccC----CC-----CCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCCE
Confidence 45699999998876 32 469999999999999999999 99999999764321100000000 00000000
Q ss_pred CCCccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHH
Q 001492 242 DDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAA 321 (1067)
Q Consensus 242 ~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~ 321 (1067)
.+..-....+|+.++.+.... .+.....+..+.+.+. ++. .+.++..+.+.. ...+|||||+|+|.++.+++
T Consensus 654 ~~~v~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~Dd~~-RF~----~F~~Aale~l~~-~~~~PDIIHaHDW~talva~ 725 (1036)
T PLN02316 654 EIKVWFGKVEGLSVYFLEPQN--GMFWAGCVYGCRNDGE-RFG----FFCHAALEFLLQ-SGFHPDIIHCHDWSSAPVAW 725 (1036)
T ss_pred EEEEEEEEECCcEEEEEeccc--cccCCCCCCCchhHHH-HHH----HHHHHHHHHHHh-cCCCCCEEEECCChHHHHHH
Confidence 000011223577777776321 1111122222211111 011 111111111111 12579999999998888888
Q ss_pred HHHhc------CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhc
Q 001492 322 LLSGA------LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLY 395 (1067)
Q Consensus 322 ~l~~~------~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y 395 (1067)
+++.. .++|+|+|+|++.... .++ +.++..||.|+|+|+.+.+++...+
T Consensus 726 llk~~~~~~~~~~~p~V~TiHnl~~~~-------------------n~l------k~~l~~AD~ViTVS~tya~EI~~~~ 780 (1036)
T PLN02316 726 LFKDHYAHYGLSKARVVFTIHNLEFGA-------------------NHI------GKAMAYADKATTVSPTYSREVSGNS 780 (1036)
T ss_pred HHHHhhhhhccCCCCEEEEeCCcccch-------------------hHH------HHHHHHCCEEEeCCHHHHHHHHhcc
Confidence 87663 3589999999863211 011 1346889999999999887765422
Q ss_pred CCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCC-CCCCCcchhhHhhhhh
Q 001492 396 DGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDG-SSPKAIPAIWSDVMRF 474 (1067)
Q Consensus 396 ~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 474 (1067)
. + ..+..++.+||||||++.|.|.... .+...+...+. ..+. ......+.++
T Consensus 781 ~-l-------------------~~~~~Kl~vI~NGID~~~w~P~tD~-----~lp~~y~~~~~~~gK~--~~k~~Lr~~l 833 (1036)
T PLN02316 781 A-I-------------------APHLYKFHGILNGIDPDIWDPYNDN-----FIPVPYTSENVVEGKR--AAKEALQQRL 833 (1036)
T ss_pred C-c-------------------ccccCCEEEEECCccccccCCcccc-----cccccCCchhhhhhhh--hhHHHHHHHh
Confidence 1 0 0112489999999999998775410 00000000000 0000 0011123445
Q ss_pred ccC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHhcCC--CCc
Q 001492 475 LTN-PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYDL--YGQ 550 (1067)
Q Consensus 475 ~~~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l--~~~ 550 (1067)
..+ ++.|+|++||||.+.||++.|++|+..+. .. +.. +|+|++++. .+...+..++.++++ .++
T Consensus 834 GL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll--~~--~~qlVIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~r 901 (1036)
T PLN02316 834 GLKQADLPLVGIITRLTHQKGIHLIKHAIWRTL--ER--NGQVVLLGSAPDP--------RIQNDFVNLANQLHSSHHDR 901 (1036)
T ss_pred CCCcccCeEEEEEeccccccCHHHHHHHHHHHh--hc--CcEEEEEeCCCCH--------HHHHHHHHHHHHhCccCCCe
Confidence 444 36799999999999999999999999874 22 333 478988652 234667788888765 578
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccC-------------Cce
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL-------------NNG 617 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~-------------~~G 617 (1067)
|.|.+..+......+|+.| |+||+||++|||||+++|||+||+|+|++++||+.|+|.++ .+|
T Consensus 902 V~f~g~~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 902 ARLCLTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred EEEEecCCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 9998775332234799999 99999999999999999999999999999999999999874 589
Q ss_pred EEeCCCCHHHHHHHHHHhhcC-HHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhH
Q 001492 618 LLVDPHDQQAIADALLKLVSE-KNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAACR 673 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~ll~d-~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~ 673 (1067)
++|++.|+++|+.+|.+++.+ ++....++..+++.+ +.|||+..+++|+++|+.+.
T Consensus 978 flf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 978 FSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred EEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999986 355566677777777 58999999999999998874
No 14
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=2.1e-38 Score=369.84 Aligned_cols=395 Identities=42% Similarity=0.631 Sum_probs=300.5
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||+|++.|+.+-+.+ | .|+.||+++++.+|+++|+++| |+|+|+|.....+... .
T Consensus 1 ~~~~~~~~~~~~~~~---~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~~-------------------~ 55 (398)
T cd03800 1 RIALISLHGSPLAQP---G-GADTGGQNVYVLELARALARLG--HEVDIFTRRIDDALPP-------------------I 55 (398)
T ss_pred CeEEEeccccccccC---C-CCCCCceeehHHHHHHHHhccC--ceEEEEEecCCcccCC-------------------c
Confidence 588888887643322 1 3789999999999999999999 9999999754221100 0
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
....+++.+++++..+. .+..+..+++++..|...+...+.. + ..+||+||+|++..+.++..+++.
T Consensus 56 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~Div~~~~~~~~~~~~~~~~~ 122 (398)
T cd03800 56 VELAPGVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLRR-------E-----GGRPDLIHAHYWDSGLVALLLARR 122 (398)
T ss_pred cccccceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHHh-------c-----CCCccEEEEecCccchHHHHHHhh
Confidence 12235888999887655 4455555677766665555444332 0 026999999998888888888999
Q ss_pred CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHH
Q 001492 327 LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVL 406 (1067)
Q Consensus 327 ~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l 406 (1067)
.++|+|++.|+++.......... ..+....++..|+.+++.||.|+++|+...+.+...+..
T Consensus 123 ~~~~~i~~~h~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------- 184 (398)
T cd03800 123 LGIPLVHTFHSLGAVKRRHLGAA---------DTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGA--------- 184 (398)
T ss_pred cCCceEEEeecccccCCcccccc---------cccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccc---------
Confidence 99999999998765332111000 001122233356778999999999999887776555432
Q ss_pred HHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEE
Q 001492 407 RARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILAL 486 (1067)
Q Consensus 407 ~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 486 (1067)
+..++.+||||+|.+.|.+.... ...+..+...+++++|+++
T Consensus 185 -------------~~~~~~vi~ng~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~ 226 (398)
T cd03800 185 -------------YPRRIRVVPPGVDLERFTPYGRA-------------------------EARRARLLRDPDKPRILAV 226 (398)
T ss_pred -------------cccccEEECCCCCccceecccch-------------------------hhHHHhhccCCCCcEEEEE
Confidence 11268999999999888654310 0001222334667899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 487 SRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 487 gRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
||+.+.||++.+++|+..+.. ..+++.+ ++|++..... ......++.+++.+++.++|.|+|+++.+++..+
T Consensus 227 gr~~~~k~~~~ll~a~~~l~~--~~~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 299 (398)
T cd03800 227 GRLDPRKGIDTLIRAYAELPE--LRERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPGRVSREDLPAL 299 (398)
T ss_pred cccccccCHHHHHHHHHHHHH--hCCCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHH
Confidence 999999999999999999863 3456665 7777653211 1123456778888999999999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHH
Q 001492 566 YRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVEC 645 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~ 645 (1067)
|+.| |++++||..|+||++++||||||+|||+++.||..|++.++.+|++++++|+++++++|.+++++++.++++
T Consensus 300 ~~~a----di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~ 375 (398)
T cd03800 300 YRAA----DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRL 375 (398)
T ss_pred HHhC----CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HcCCHHHHHHHHH
Q 001492 646 RKNGWKNI-HLFSWPEHCRTYL 666 (1067)
Q Consensus 646 ~~~~~~~~-~~fsw~~~a~~~l 666 (1067)
++++++.+ ++|||+.++++|+
T Consensus 376 ~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 376 SRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHhCCHHHHHHHHh
Confidence 99999999 6999999999886
No 15
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=8e-38 Score=373.98 Aligned_cols=377 Identities=19% Similarity=0.223 Sum_probs=272.4
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCC
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPED 242 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~ 242 (1067)
.++|||+++. +.. + .+..||++.++.+|+++|.++| |+|+|+|.....+.
T Consensus 56 ~~~mrI~~~~-~~~----~-----~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~~------------------ 105 (465)
T PLN02871 56 SRPRRIALFV-EPS----P-----FSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEGVPQ------------------ 105 (465)
T ss_pred CCCceEEEEE-CCc----C-----CcccccHHHHHHHHHHHHHHCC--CeEEEEecCCCCCc------------------
Confidence 5789999997 222 1 1568999999999999999999 99999998532110
Q ss_pred CCccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-hhHHHH
Q 001492 243 DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-AGDSAA 321 (1067)
Q Consensus 243 ~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a~~~a~ 321 (1067)
...++.+++++..+.. +... ..+.+ .+...+.. .+.+ .+|||||+|.+. ....+.
T Consensus 106 ------~~~g~~v~~~~~~~~~-~~~~-~~~~~--~~~~~l~~-------~i~~-------~kpDiIh~~~~~~~~~~~~ 161 (465)
T PLN02871 106 ------EFHGAKVIGSWSFPCP-FYQK-VPLSL--ALSPRIIS-------EVAR-------FKPDLIHASSPGIMVFGAL 161 (465)
T ss_pred ------cccCceeeccCCcCCc-cCCC-ceeec--cCCHHHHH-------HHHh-------CCCCEEEECCCchhHHHHH
Confidence 0125555544322110 1111 00000 01111111 1222 569999999864 344555
Q ss_pred HHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchH
Q 001492 322 LLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVK 401 (1067)
Q Consensus 322 ~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~ 401 (1067)
.+++..++|+|++.|+......... .. ...++.+. ..++..++.+|.|+++|+...+.+...+.
T Consensus 162 ~~ak~~~ip~V~~~h~~~~~~~~~~------~~---~~~~~~~~--~~~r~~~~~ad~ii~~S~~~~~~l~~~~~----- 225 (465)
T PLN02871 162 FYAKLLCVPLVMSYHTHVPVYIPRY------TF---SWLVKPMW--DIIRFLHRAADLTLVTSPALGKELEAAGV----- 225 (465)
T ss_pred HHHHHhCCCEEEEEecCchhhhhcc------cc---hhhHHHHH--HHHHHHHhhCCEEEECCHHHHHHHHHcCC-----
Confidence 6677889999999998654332111 00 01111111 12455688999999999988777644321
Q ss_pred HHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhc-cCCCC
Q 001492 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFL-TNPHK 480 (1067)
Q Consensus 402 l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 480 (1067)
.+..++.+||||+|.+.|.+..... ....++. ..+++
T Consensus 226 -----------------~~~~kv~vi~nGvd~~~f~p~~~~~-------------------------~~~~~~~~~~~~~ 263 (465)
T PLN02871 226 -----------------TAANRIRVWNKGVDSESFHPRFRSE-------------------------EMRARLSGGEPEK 263 (465)
T ss_pred -----------------CCcCeEEEeCCccCccccCCccccH-------------------------HHHHHhcCCCCCC
Confidence 1123899999999999887643100 0011111 23467
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCC
Q 001492 481 PMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQ 559 (1067)
Q Consensus 481 ~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~ 559 (1067)
++|+++||+.+.||++.+++++..+ +++.| |+|+++.. ..+.+++.. .+|.|+|+++.
T Consensus 264 ~~i~~vGrl~~~K~~~~li~a~~~~------~~~~l~ivG~G~~~-----------~~l~~~~~~----~~V~f~G~v~~ 322 (465)
T PLN02871 264 PLIVYVGRLGAEKNLDFLKRVMERL------PGARLAFVGDGPYR-----------EELEKMFAG----TPTVFTGMLQG 322 (465)
T ss_pred eEEEEeCCCchhhhHHHHHHHHHhC------CCcEEEEEeCChHH-----------HHHHHHhcc----CCeEEeccCCH
Confidence 8999999999999999999999876 34554 88987643 334444443 36999999999
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc---CCceEEeCCCCHHHHHHHHHHhh
Q 001492 560 YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA---LNNGLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 560 ~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~---~~~Gllv~p~d~~~la~aL~~ll 636 (1067)
++++.+|+.| |+||+||..|+||++++||||||+|||+++.||..|++.+ +.+|++++|+|+++++++|.+++
T Consensus 323 ~ev~~~~~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll 398 (465)
T PLN02871 323 DELSQAYASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL 398 (465)
T ss_pred HHHHHHHHHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999999999999999998 89999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH-HHHHhHhcC
Q 001492 637 SEKNLWVECRKNGWKNIHLFSWPEHCRTYLT-RVAACRMRH 676 (1067)
Q Consensus 637 ~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~-~~~~~~~~~ 676 (1067)
++++.++++++++++.++.|||+.+++++++ .|.++....
T Consensus 399 ~~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 399 ADPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred hCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 698887753
No 16
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=4.2e-38 Score=377.25 Aligned_cols=446 Identities=20% Similarity=0.201 Sum_probs=287.1
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCc-CCCccc---c-cCCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWS-YGEPAE---M-LTGGP 240 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~-y~~~~e---~-l~~~~ 240 (1067)
|||++||.... |. ..+||+..++..|+++|+++| |+|.|+|+.+..-...+. ..+... . +....
T Consensus 1 m~i~~vs~E~~----P~-----~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMA----PF-----AKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEeccc----cc-----cCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 89999997764 21 459999999999999999999 999999987643111100 000000 0 00000
Q ss_pred CCCCccccccCCeEEEeccCCCCccCccc-ccccc--hhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchh
Q 001492 241 EDDGIEVGESSGAYIIRIPFGPRDKYLRK-ELLWP--YIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAG 317 (1067)
Q Consensus 241 ~~~~~~~~~~~gv~i~ri~~~~~~~~l~k-~~l~~--~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~ 317 (1067)
..+..-....+|+.++++..... ..+ ..+.. +...+.. +. .+.++..+.+.. ...+|||||+|+|.++
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~~---~~r~~~~y~~~~~d~~~r-~~----~f~~a~~~~~~~-~~~~~DiiH~hdw~~~ 140 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPSL---FDRPGGIYGDDYPDNAER-FA----FFSRAAAELLSG-LGWQPDVVHAHDWHTA 140 (473)
T ss_pred eEEEEEEEEECCceEEEEECHHH---cCCCCCCCCCCCCCHHHH-HH----HHHHHHHHHHHh-cCCCCCEEEECCcHHH
Confidence 00001112346788888865321 111 11211 1111110 10 111111111111 1257999999999999
Q ss_pred HHHHHHHhcCC---CcEEEEeCCCchhh-H-HHHHhhCCCChhhh-hhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHH
Q 001492 318 DSAALLSGALN---VPMVLTGHSLGRNK-L-EQLLKQGRQSKEDI-NSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQ 391 (1067)
Q Consensus 318 ~~a~~l~~~~g---iP~V~t~H~l~~~~-~-~~l~~~g~~~~~~i-~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~ 391 (1067)
.++.+++..++ +|+|+|+|++.... + ...+....+..... ...+....++..++.++..||.|+++|+...+++
T Consensus 141 ~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei 220 (473)
T TIGR02095 141 LVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREI 220 (473)
T ss_pred HHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHh
Confidence 98888887776 99999999975321 0 00111100110000 0011111134446778999999999999988876
Q ss_pred HhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhh
Q 001492 392 WGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDV 471 (1067)
Q Consensus 392 ~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1067)
.....++. +...++ .+..++.+||||||.+.|.|... + .+...+.......+ .......+
T Consensus 221 ~~~~~~~~--l~~~l~-----------~~~~ki~~I~NGid~~~~~p~~~-~----~~~~~~~~~~~~~k--~~~k~~l~ 280 (473)
T TIGR02095 221 LTPEFGYG--LDGVLK-----------ARSGKLRGILNGIDTEVWNPATD-P----YLKANYSADDLAGK--AENKEALQ 280 (473)
T ss_pred cCCcCCcc--chhHHH-----------hcCCCeEEEeCCCCccccCCCCC-c----ccccCcCccchhhh--hhhHHHHH
Confidence 54321111 111111 12248999999999999987531 1 11110000000000 00011123
Q ss_pred hhhccCC--CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHhcCCC
Q 001492 472 MRFLTNP--HKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYDLY 548 (1067)
Q Consensus 472 ~~~~~~~--~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~ 548 (1067)
.++..+. ++++|+++||+.+.||++.+++|+.++.+ . ++. +|+|+++. ++...+..++.+++
T Consensus 281 ~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~--~~~lvi~G~g~~---------~~~~~l~~~~~~~~-- 345 (473)
T TIGR02095 281 EELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE--L--GGQLVVLGTGDP---------ELEEALRELAERYP-- 345 (473)
T ss_pred HHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH--c--CcEEEEECCCCH---------HHHHHHHHHHHHCC--
Confidence 3344433 78999999999999999999999999853 2 244 47888751 22345666666654
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccC------CceEEeCC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL------NNGLLVDP 622 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~------~~Gllv~p 622 (1067)
.++.|.+.++.+++..+|+.| |++|+||.+||||++++|||+||+|||+++.||..|+|.++ .+|++++|
T Consensus 346 ~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~ 421 (473)
T TIGR02095 346 GNVRVIIGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEE 421 (473)
T ss_pred CcEEEEEcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCC
Confidence 568888777778889999999 99999999999999999999999999999999999999988 89999999
Q ss_pred CCHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 001492 623 HDQQAIADALLKLVS----EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 623 ~d~~~la~aL~~ll~----d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 672 (1067)
.|+++++++|.+++. +++.++++++++++ +.|||+.++++|+++|+++
T Consensus 422 ~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 422 YDPGALLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 999999999999988 99999999988863 5899999999999999863
No 17
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=1.5e-37 Score=364.50 Aligned_cols=366 Identities=20% Similarity=0.217 Sum_probs=271.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.... |..||.++++.+|+++|+++| |+|+|+|+....+. + .
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~-----~--~------------- 47 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRV-----G--I------------- 47 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCC-----C--c-------------
Confidence 6899986665 779999999999999999999 99999997531110 0 0
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCch--hHHHHHHH
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA--GDSAALLS 324 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a--~~~a~~l~ 324 (1067)
....+++.++++|..+. .+....+....+ +..+.+ .+.+ .+|||||+|.... ...+.+++
T Consensus 48 ~~~~~~i~v~~~p~~~~----~~~~~~~~~~~~----~~~l~~---~~~~-------~~~DiIh~~~~~~~~~~~~~~~~ 109 (398)
T cd03796 48 RYLTNGLKVYYLPFVVF----YNQSTLPTFFGT----FPLLRN---ILIR-------ERITIVHGHQAFSALAHEALLHA 109 (398)
T ss_pred ccccCceeEEEecceec----cCCccccchhhh----HHHHHH---HHHh-------cCCCEEEECCCCchHHHHHHHHh
Confidence 01135788888886332 111111111111 111111 1111 5699999998643 33466678
Q ss_pred hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHH
Q 001492 325 GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEK 404 (1067)
Q Consensus 325 ~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 404 (1067)
+..++|+|+|.|+++.... . . .....+ .++..++.+|.++++|+...+.+.... ..
T Consensus 110 ~~~~~~~v~t~h~~~~~~~--~------~-------~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~------ 165 (398)
T cd03796 110 RTMGLKTVFTDHSLFGFAD--A------S-------SIHTNK--LLRFSLADVDHVICVSHTSKENTVLRA-SL------ 165 (398)
T ss_pred hhcCCcEEEEecccccccc--h------h-------hHHhhH--HHHHhhccCCEEEEecHhHhhHHHHHh-CC------
Confidence 8889999999998642110 0 0 000111 134567899999999997665432211 11
Q ss_pred HHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEE
Q 001492 405 VLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMIL 484 (1067)
Q Consensus 405 ~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 484 (1067)
+..++.+||||+|.+.|.+... ...+++++|+
T Consensus 166 ---------------~~~k~~vi~ngvd~~~f~~~~~---------------------------------~~~~~~~~i~ 197 (398)
T cd03796 166 ---------------DPERVSVIPNAVDSSDFTPDPS---------------------------------KRDNDKITIV 197 (398)
T ss_pred ---------------ChhhEEEEcCccCHHHcCCCcc---------------------------------cCCCCceEEE
Confidence 1238999999999988865431 0125678999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHH
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVP 563 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~ 563 (1067)
++||+.+.||++.+++|+..+. +..+++.+ |+|+++. ...+.++++++++.++|.|+|+++.+++.
T Consensus 198 ~~grl~~~Kg~~~li~a~~~l~--~~~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G~~~~~~~~ 264 (398)
T cd03796 198 VISRLVYRKGIDLLVGIIPEIC--KKHPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLGAVPHERVR 264 (398)
T ss_pred EEeccchhcCHHHHHHHHHHHH--hhCCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeCCCCHHHHH
Confidence 9999999999999999999884 34567776 8888763 34567888899999999999999999999
Q ss_pred HHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHH
Q 001492 564 EIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWV 643 (1067)
Q Consensus 564 ~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~ 643 (1067)
.+|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.++ .+++++ .|.++++++|.++++++....
T Consensus 265 ~~l~~a----d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~-~~~~~l~~~l~~~l~~~~~~~ 338 (398)
T cd03796 265 DVLVQG----HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAE-PDVESIVRKLEEAISILRTGK 338 (398)
T ss_pred HHHHhC----CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecC-CCHHHHHHHHHHHHhChhhhh
Confidence 999999 99999999999999999999999999999999999999765 455555 489999999999999887776
Q ss_pred HHHHHHHHHH-HcCCHHHHHHHHHHHHHHhHh
Q 001492 644 ECRKNGWKNI-HLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 644 ~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
.+.+++++.+ ++|||+..+++|+++|++++.
T Consensus 339 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 339 HDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 7788888887 599999999999999999875
No 18
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=7.8e-41 Score=381.91 Aligned_cols=477 Identities=33% Similarity=0.433 Sum_probs=358.1
Q ss_pred hhhhhhcccCCCcCCCcccccCCC------CCcccccccccccccccccccCCCc-eEEEEEecccccccCCcCCCCCCC
Q 001492 117 VTEDMSEDLSEGEKGDGVGEIQTP------DTPRKKFQRNFSNLEVWSDDKKEKK-LYIVLISLHGLVRGENMELGRDSD 189 (1067)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-m~I~lIs~~~~~~~~~~~~g~~~~ 189 (1067)
++.|+++++++++|.......... ..++-+...+...+..|..+.+.-. +.+++. |.+ ++| +||
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s-------~~~-~lg-~~d 71 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS-------GQD-VLG-LPD 71 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHh-------ccc-ccC-CCC
Confidence 356788888888888755544322 2233445555557788876664322 333322 668 899 899
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
+||+.+|++..+++|. +++++++...|++...+.....+..|.++. ...+....+.+++++++|+++..++.
T Consensus 72 ~G~qV~~l~~h~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~-----~~~~~~~~~~~~~il~~~~~~~~k~~-- 143 (495)
T KOG0853|consen 72 TGGQVVYLTSHEDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMG-----QFLEQVAGCAYLRILRIPFGILFKWA-- 143 (495)
T ss_pred CCceEEEEehhhhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccc-----hhhhhhhccceeEEEEeccchhhhhh--
Confidence 9999999999999997 666666666665544443333344444331 01233556789999999998875555
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQ 349 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~ 349 (1067)
+.+||++..|+.. .. .+.++++ . ||++|.++++....+.++++++|++.+++.|.++..+.++...+
T Consensus 144 ~~~d~~i~d~~~~-~~-------~l~~~~~----~-p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~~ 210 (495)
T KOG0853|consen 144 EKVDPIIEDFVSA-CV-------PLLKQLS----G-PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGLA 210 (495)
T ss_pred hhhceeecchHHH-HH-------HHHHHhc----C-CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhcc
Confidence 7789999988842 22 2333333 2 99999999999999999999999999999999999998887665
Q ss_pred CCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC
Q 001492 350 GRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429 (1067)
Q Consensus 350 g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn 429 (1067)
++. +...|.+.+++.++...+..+| ++++.+++..+|..|+.|...++..+..|..+|+++.+++++++..|++
T Consensus 211 ~~~----~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~p 284 (495)
T KOG0853|consen 211 WKI----LVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEP 284 (495)
T ss_pred ceE----ecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCC
Confidence 543 6678999999999999999999 8899999999999999888887777777777777777777777777777
Q ss_pred CCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc
Q 001492 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLR 509 (1067)
Q Consensus 430 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~ 509 (1067)
|.|...+. +||..+...-
T Consensus 285 gkd~~l~l--------------------------------------------------------------~a~~~~~~~i 302 (495)
T KOG0853|consen 285 GKDQDLAL--------------------------------------------------------------PAFTLLHDSI 302 (495)
T ss_pred CCCceeeh--------------------------------------------------------------hhHHhhhccc
Confidence 66665443 2333332111
Q ss_pred ---CCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCC-CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCC
Q 001492 510 ---ELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLY-GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEP 584 (1067)
Q Consensus 510 ---~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~-~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Eg 584 (1067)
..+...+ ++|++ .+++..+++.+++.++.+++++++++ ..|.|..++++.+. |+.++.++.+|+.|+. |.
T Consensus 303 ~~~~~~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---yrl~adt~~v~~qPa~-E~ 377 (495)
T KOG0853|consen 303 PEPSISSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---YRLAADTKGVLYQPAN-EH 377 (495)
T ss_pred CCCCCCceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---HHHHHhcceEEecCCC-CC
Confidence 1233444 55533 26677788899999999999999996 45566677665554 7777788899999988 99
Q ss_pred CCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHH---HHHHHHHHhhcCHHHHHHHHHHHHHHHH-cCCHHH
Q 001492 585 FGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQ---AIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPE 660 (1067)
Q Consensus 585 fgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~---~la~aL~~ll~d~~~~~~~~~~~~~~~~-~fsw~~ 660 (1067)
||+|.+||||||+|||||++|||.|+|.++.+|++++| +.+ .+|++|.++..||++|.+|+++|+++++ .|||
T Consensus 378 FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~-- 454 (495)
T KOG0853|consen 378 FGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSW-- 454 (495)
T ss_pred ccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhH--
Confidence 99999999999999999999999999999999999999 677 5999999999999999999999999996 6999
Q ss_pred HHHHHHHHHHHhHhcCCCCCCCCcchhhhhhhcccccchhhhhhhccccccC
Q 001492 661 HCRTYLTRVAACRMRHPQWQTDTPVDEMAAEESSFNDSLKDVQDMSLRLSVD 712 (1067)
Q Consensus 661 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~ 712 (1067)
+.|.+.+..++.+.++|+... ..+++.|++++++.+++.
T Consensus 455 --~~~~~ri~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 493 (495)
T KOG0853|consen 455 --QHYSERIASVLGKYLQWEKVS-----------SLDSLEDRRYISLFYALS 493 (495)
T ss_pred --HHHHHHHHHHhHhcCCccccc-----------ccccccccccHHHHHHhh
Confidence 555555566666777766432 367888999998665543
No 19
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=4.9e-37 Score=358.20 Aligned_cols=377 Identities=22% Similarity=0.275 Sum_probs=271.8
Q ss_pred eEEEEEecccccccCCcCCCCCCC-CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSD-TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDG 244 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~-~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~ 244 (1067)
|||++|+.... |+ .||.++++.+|+++|.+. |+|+|+|.... .
T Consensus 1 mkI~~i~~~~~-----------p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~-------------------- 44 (388)
T TIGR02149 1 MKVTVLTREYP-----------PNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--R-------------------- 44 (388)
T ss_pred CeeEEEecccC-----------ccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--h--------------------
Confidence 79999986543 55 499999999999999886 56777765321 0
Q ss_pred ccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHH
Q 001492 245 IEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLS 324 (1067)
Q Consensus 245 ~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~ 324 (1067)
....++.+++++.... .......+..+... +.. . . ...+|||||+|.+.++..+.+++
T Consensus 45 ---~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~---~-~------~~~~~divh~~~~~~~~~~~~~~ 102 (388)
T TIGR02149 45 ---FDSEGLTVKGYRPWSE-----LKEANKALGTFSVD----LAM---A-N------DPVDADVVHSHTWYTFLAGHLAK 102 (388)
T ss_pred ---hcCCCeEEEEecChhh-----ccchhhhhhhhhHH----HHH---h-h------CCCCCCeEeecchhhhhHHHHHH
Confidence 0123677776653111 00111111111000 000 0 0 11359999999987777677777
Q ss_pred hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHH
Q 001492 325 GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEK 404 (1067)
Q Consensus 325 ~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 404 (1067)
+..++|+|+|.|++.+.... ........+.+..+ .++.++..+|.|+++|+...+.+.+.|.+..+
T Consensus 103 ~~~~~p~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~---- 168 (388)
T TIGR02149 103 KLYDKPLVVTAHSLEPLRPW--------KEEQLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPDLDP---- 168 (388)
T ss_pred HhcCCCEEEEeecccccccc--------cccccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCCCCc----
Confidence 77899999999997542210 00000111223333 36678899999999999887776555533222
Q ss_pred HHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEE
Q 001492 405 VLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMIL 484 (1067)
Q Consensus 405 ~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 484 (1067)
.++.+||||+|...|.+... ...+.++..++++++|+
T Consensus 169 -----------------~~i~vi~ng~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~i~ 205 (388)
T TIGR02149 169 -----------------EKVHVIYNGIDTKEYKPDDG--------------------------NVVLDRYGIDRSRPYIL 205 (388)
T ss_pred -----------------ceEEEecCCCChhhcCCCch--------------------------HHHHHHhCCCCCceEEE
Confidence 38999999999988764320 11223344456788999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCC-CCcEEe-CCCCCCCCH
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDL-YGQVAY-PKHHKQYDV 562 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l-~~~V~~-~g~~~~~dl 562 (1067)
++||+.+.||++.+++|+.++. ....+ +++|++++. .++...+.+.+..++. .++|.| .+.++.+++
T Consensus 206 ~~Grl~~~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 274 (388)
T TIGR02149 206 FVGRITRQKGVPHLLDAVHYIP---KDVQV-VLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWINKMLPKEEL 274 (388)
T ss_pred EEcccccccCHHHHHHHHHHHh---hcCcE-EEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEecCCCCHHHH
Confidence 9999999999999999999884 22223 355655432 2234566666666655 234655 578899999
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCH------HHHHHHHHHhh
Q 001492 563 PEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQ------QAIADALLKLV 636 (1067)
Q Consensus 563 ~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~------~~la~aL~~ll 636 (1067)
..+|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++.|. ++++++|.+++
T Consensus 275 ~~~~~~a----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~ 350 (388)
T TIGR02149 275 VELLSNA----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL 350 (388)
T ss_pred HHHHHhC----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred cCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 637 SEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 637 ~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
++++.++++++++++.+ ++|||+.++++|.++|+++
T Consensus 351 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 351 ADPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred hCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 99999999999999998 5999999999999999875
No 20
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1e-36 Score=363.63 Aligned_cols=450 Identities=19% Similarity=0.172 Sum_probs=281.2
Q ss_pred CceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCc--ccccCCCCC
Q 001492 164 KKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEP--AEMLTGGPE 241 (1067)
Q Consensus 164 ~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~--~e~l~~~~~ 241 (1067)
.+|||++|+.... |+ ..+||..-.+..|.++|+++| |+|.|+++.+..- ....... ...+.....
T Consensus 2 ~~~~il~v~~E~~----p~-----~k~ggl~dv~~~lp~~l~~~g--~~v~v~~P~y~~~--~~~~~~~~~~~~~~~~~~ 68 (485)
T PRK14099 2 TPLRVLSVASEIF----PL-----IKTGGLADVAGALPAALKAHG--VEVRTLVPGYPAV--LAGIEDAEQVHSFPDLFG 68 (485)
T ss_pred CCcEEEEEEeccc----cc-----cCCCcHHHHHHHHHHHHHHCC--CcEEEEeCCCcch--hhhhcCceEEEEEeeeCC
Confidence 3599999997665 33 689999999999999999999 9999999976431 1000000 000000000
Q ss_pred -CCCccccccCCeEEEeccCCCCccCcccc-cccch--hHHHHHHHHHHHHHHhHHHHhhhcCC-CCCCceEEEEcCCch
Q 001492 242 -DDGIEVGESSGAYIIRIPFGPRDKYLRKE-LLWPY--IQEFVDGALAHCLNMSKVLGEQIGGG-QPVWPYVIHGHYADA 316 (1067)
Q Consensus 242 -~~~~~~~~~~gv~i~ri~~~~~~~~l~k~-~l~~~--l~~f~~~~l~~~~~~~~~L~~~~~~~-~~~~pDvIh~h~~~a 316 (1067)
.+..-....+|+.++.+.... |..+. .+... -..+.+...++.. +.++..+..... ...+|||||+|.|.+
T Consensus 69 ~~~~~~~~~~~~v~~~~~~~~~---~f~r~~~~y~~~~~~~~~d~~~rf~~-f~~a~~~~~~~~~~~~~pDIiH~Hdw~~ 144 (485)
T PRK14099 69 GPARLLAARAGGLDLFVLDAPH---LYDRPGNPYVGPDGKDWPDNAQRFAA-LARAAAAIGQGLVPGFVPDIVHAHDWQA 144 (485)
T ss_pred ceEEEEEEEeCCceEEEEeChH---hhCCCCCCCCCccCCCCCcHHHHHHH-HHHHHHHHHhhhccCCCCCEEEECCcHH
Confidence 000001112456555553211 11111 01100 0001122222111 111211211111 125799999999988
Q ss_pred hHHHHHHHh--cCCCcEEEEeCCCchhh-H--HHHHhhCCCChhhhh-hHhHHHHhHHHhhcccccCCEEEeCCHHHHHH
Q 001492 317 GDSAALLSG--ALNVPMVLTGHSLGRNK-L--EQLLKQGRQSKEDIN-STYKIMRRIEGEELSLDAAELVITSTKQEIDE 390 (1067)
Q Consensus 317 ~~~a~~l~~--~~giP~V~t~H~l~~~~-~--~~l~~~g~~~~~~i~-~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~ 390 (1067)
+.++.++.. ..++|+|+|+|++.... + ..+...|. ...... ....+...+...+.++..||.|+|+|+...++
T Consensus 145 ~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~e 223 (485)
T PRK14099 145 GLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGL-PPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALE 223 (485)
T ss_pred HHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCC-ChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHH
Confidence 888877653 34689999999974321 1 11111111 111000 00111122233566789999999999998887
Q ss_pred HHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcch-hhH
Q 001492 391 QWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPA-IWS 469 (1067)
Q Consensus 391 ~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 469 (1067)
+...+.+.. +...| ..+..++.+||||||++.|.|... ..+...+...+. ..... ...
T Consensus 224 i~~~~~g~g--l~~~l-----------~~~~~ki~vI~NGID~~~f~p~~~-----~~~~~~~~~~~~---~~k~~~k~~ 282 (485)
T PRK14099 224 IQGPEAGMG--LDGLL-----------RQRADRLSGILNGIDTAVWNPATD-----ELIAATYDVETL---AARAANKAA 282 (485)
T ss_pred HhcccCCcC--hHHHH-----------HhhCCCeEEEecCCchhhcccccc-----chhhhcCChhHH---HhHHHhHHH
Confidence 754432211 00111 112348999999999999987542 011000000000 00000 011
Q ss_pred hhhhhccC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHhcC
Q 001492 470 DVMRFLTN--PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYD 546 (1067)
Q Consensus 470 ~~~~~~~~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~ 546 (1067)
.++++..+ ++.++|+++||+.+.||++.+++|+..+.+ . ++. +|+|+++. ++...+..++.++.
T Consensus 283 l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~--~~~lvivG~G~~---------~~~~~l~~l~~~~~ 349 (485)
T PRK14099 283 LQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--E--GAQLALLGSGDA---------ELEARFRAAAQAYP 349 (485)
T ss_pred HHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--c--CcEEEEEecCCH---------HHHHHHHHHHHHCC
Confidence 22334443 357899999999999999999999998842 2 344 47788752 23345666666654
Q ss_pred CCCcE-EeCCCCCCCCHHHHHH-HhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccC---------C
Q 001492 547 LYGQV-AYPKHHKQYDVPEIYR-LAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL---------N 615 (1067)
Q Consensus 547 l~~~V-~~~g~~~~~dl~~ly~-~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~---------~ 615 (1067)
+++ .|.|+ .++++.+|. .| |+||+||.+||||++++||||||+|+|++++||+.|+|.++ .
T Consensus 350 --~~v~~~~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~ 421 (485)
T PRK14099 350 --GQIGVVIGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVA 421 (485)
T ss_pred --CCEEEEeCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCC
Confidence 345 68898 688999875 57 99999999999999999999999988889999999998775 5
Q ss_pred ceEEeCCCCHHHHHHHHHH---hhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhc
Q 001492 616 NGLLVDPHDQQAIADALLK---LVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~---ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 675 (1067)
+|++|+|.|+++++++|.+ +++|++.|++++++++. +.|||+..+++|+++|++++..
T Consensus 422 ~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 422 TGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred ceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHhh
Confidence 8999999999999999997 67799999999999873 6899999999999999998754
No 21
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.2e-36 Score=363.48 Aligned_cols=451 Identities=15% Similarity=0.145 Sum_probs=284.5
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCC-CcCCCc--ccccC-CCC
Q 001492 165 KLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVD-WSYGEP--AEMLT-GGP 240 (1067)
Q Consensus 165 ~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~-~~y~~~--~e~l~-~~~ 240 (1067)
.|||++|+.... |+ ..+||..-.+..|.++|+++| |+|.|+++.+..-... +..... ...+. +..
T Consensus 5 ~~~il~v~~E~~----p~-----~k~Ggl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~ 73 (489)
T PRK14098 5 NFKVLYVSGEVS----PF-----VRVSALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLK 73 (489)
T ss_pred CcEEEEEeecch----hh-----cccchHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeec
Confidence 399999997665 33 679999999999999999999 9999999876331100 000000 00000 000
Q ss_pred CCCC-ccc--ccc--CCeEEEeccCCCCccCcccccccchh---HHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEc
Q 001492 241 EDDG-IEV--GES--SGAYIIRIPFGPRDKYLRKELLWPYI---QEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGH 312 (1067)
Q Consensus 241 ~~~~-~~~--~~~--~gv~i~ri~~~~~~~~l~k~~l~~~l---~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h 312 (1067)
..+. ..+ ... .++.++.+... .|..+..+..+- ..+.+...+... +.++..+.+.. ...+|||||+|
T Consensus 74 ~~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~rf~~-f~~a~l~~~~~-~~~~pDiiH~h 148 (489)
T PRK14098 74 EKTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAEKVIF-FNVGVLETLQR-LGWKPDIIHCH 148 (489)
T ss_pred CeeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHHHHHH-HHHHHHHHHHh-cCCCCCEEEec
Confidence 0000 000 001 23444444321 111222111100 001122222111 11111121211 12579999999
Q ss_pred CCchhHHHHHHHhcC-------CCcEEEEeCCCchhhHH--HHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 313 YADAGDSAALLSGAL-------NVPMVLTGHSLGRNKLE--QLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 313 ~~~a~~~a~~l~~~~-------giP~V~t~H~l~~~~~~--~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
+|.++.++.+++... ++|+|+|+|++...... ..+.. .++.............+...+.++..||.|+|+
T Consensus 149 dw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitV 227 (489)
T PRK14098 149 DWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQK-LLPEEVCSGLHREGDEVNMLYTGVEHADLLTTT 227 (489)
T ss_pred CcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHH-hCCHHhhhhhhhcCCcccHHHHHHHhcCcceee
Confidence 998888888887543 79999999997432100 00000 011110000001112234456788999999999
Q ss_pred CHHHHHHHHhh-cCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 384 TKQEIDEQWGL-YDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 384 S~~~~~~~~~~-y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
|+...+++... ..++ .+...|+. ...++.+||||||++.|.|... ..+...++..+...+.
T Consensus 228 S~~~a~ei~~~~~~~~--gl~~~l~~-----------~~~kl~~I~NGID~~~~~p~~d-----~~~~~~~~~~~~~~k~ 289 (489)
T PRK14098 228 SPRYAEEIAGDGEEAF--GLDKVLEE-----------RKMRLHGILNGIDTRQWNPSTD-----KLIKKRYSIERLDGKL 289 (489)
T ss_pred CHHHHHHhCcCCCCCc--ChHHHHHh-----------cCCCeeEEeCCccccccCCccc-----ccccccCCcchhhhHH
Confidence 99999887542 1111 12222221 1248999999999999987542 1111111000000000
Q ss_pred CcchhhHhhhhhcc--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHH
Q 001492 463 AIPAIWSDVMRFLT--NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVL 539 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~ 539 (1067)
......++++.. .++.++|+++||+.+.||++.+++|+..+.+ .++.+ |+|+++. .+...+.
T Consensus 290 --~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~----~~~~lvivG~G~~---------~~~~~l~ 354 (489)
T PRK14098 290 --ENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE----LDIQLVICGSGDK---------EYEKRFQ 354 (489)
T ss_pred --HHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh----cCcEEEEEeCCCH---------HHHHHHH
Confidence 000112223333 3467899999999999999999999999853 24554 7888752 2345667
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc----CC
Q 001492 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA----LN 615 (1067)
Q Consensus 540 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~----~~ 615 (1067)
.++.+++ ++|.|.+.++.+++..+|+.| |+||+||.+|+||++.+|||+||+|+|+++.||..|++.+ +.
T Consensus 355 ~l~~~~~--~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~ 428 (489)
T PRK14098 355 DFAEEHP--EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKG 428 (489)
T ss_pred HHHHHCC--CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCC
Confidence 7777763 689999999888899999999 9999999999999999999999999999999999998864 67
Q ss_pred ceEEeCCCCHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhH
Q 001492 616 NGLLVDPHDQQAIADALLKLV---SEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACR 673 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll---~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~ 673 (1067)
+|++|++.|+++++++|.+++ .+++.|+++++++++ +.|||+..+++|+++|++++
T Consensus 429 ~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 429 SGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred ceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHh
Confidence 999999999999999999865 588888888776642 58999999999999999876
No 22
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.9e-35 Score=339.54 Aligned_cols=366 Identities=23% Similarity=0.317 Sum_probs=263.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++++ + |..||.++++.+|+++|++.| |+|+|+|.... . . .
T Consensus 1 mki~~~~---~-----------p~~gG~~~~~~~la~~L~~~G--~~v~v~~~~~~--~-~----~-------------- 43 (371)
T cd04962 1 MKIGIVC---Y-----------PTYGGSGVVATELGKALARRG--HEVHFITSSRP--F-R----L-------------- 43 (371)
T ss_pred CceeEEE---E-----------eCCCCccchHHHHHHHHHhcC--CceEEEecCCC--c-c----h--------------
Confidence 7899997 2 557999999999999999999 99999987421 0 0 0
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHH-
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLS- 324 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~- 324 (1067)
....+++.+..++.... +......+. .... ..+.+.+.+ .+||+||+|++........++
T Consensus 44 -~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~---~~l~~~i~~-------~~~divh~~~~~~~~~~~~~~~ 104 (371)
T cd04962 44 -DEYSPNIFFHEVEVPQY----PLFQYPPYD----LALA---SKIAEVAKR-------YKLDLLHVHYAVPHAVAAYLAR 104 (371)
T ss_pred -hhhccCeEEEEeccccc----chhhcchhH----HHHH---HHHHHHHhc-------CCccEEeecccCCccHHHHHHH
Confidence 00112444443332111 100000110 0111 111222222 579999999864322222222
Q ss_pred ---hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchH
Q 001492 325 ---GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVK 401 (1067)
Q Consensus 325 ---~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~ 401 (1067)
+..++|+|++.|+...... +. ...++ . .++..++.+|.|++.|+...+.+...+.
T Consensus 105 ~~~~~~~~~~i~~~h~~~~~~~------~~------~~~~~---~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~----- 162 (371)
T cd04962 105 EILGKKDLPVVTTLHGTDITLV------GQ------DPSFQ---P--ATRFSIEKSDGVTAVSESLRQETYELFD----- 162 (371)
T ss_pred HhcCcCCCcEEEEEcCCccccc------cc------cccch---H--HHHHHHhhCCEEEEcCHHHHHHHHHhcC-----
Confidence 2238999999997632110 00 00111 1 1345688999999999987776644431
Q ss_pred HHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCc
Q 001492 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKP 481 (1067)
Q Consensus 402 l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1067)
...++.+||||+|...|.+... ...+.++...++++
T Consensus 163 ------------------~~~~i~vi~n~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~ 198 (371)
T cd04962 163 ------------------ITKEIEVIPNFVDEDRFRPKPD--------------------------EALKRRLGAPEGEK 198 (371)
T ss_pred ------------------CcCCEEEecCCcCHhhcCCCch--------------------------HHHHHhcCCCCCCe
Confidence 1138999999999877654321 01112334456788
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCC
Q 001492 482 MILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYD 561 (1067)
Q Consensus 482 ~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~d 561 (1067)
+++++||+.+.||++.+++|+..+.. ..+...+++|.+++. ..+.+++.++++.++|.|+|. .++
T Consensus 199 ~il~~g~l~~~K~~~~li~a~~~l~~--~~~~~l~i~G~g~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~ 263 (371)
T cd04962 199 VLIHISNFRPVKRIDDVIRIFAKVRK--EVPARLLLVGDGPER-----------SPAERLARELGLQDDVLFLGK--QDH 263 (371)
T ss_pred EEEEecccccccCHHHHHHHHHHHHh--cCCceEEEEcCCcCH-----------HHHHHHHHHcCCCceEEEecC--ccc
Confidence 99999999999999999999998853 223333588887643 345677788888889999997 468
Q ss_pred HHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHH
Q 001492 562 VPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNL 641 (1067)
Q Consensus 562 l~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~ 641 (1067)
+..+|+.| |++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.
T Consensus 264 ~~~~~~~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~ 339 (371)
T cd04962 264 VEELLSIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDEL 339 (371)
T ss_pred HHHHHHhc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHH
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 642 WVECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 642 ~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
+.++++++++.+ ++|||+.++++|.++|+++
T Consensus 340 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 340 WQEFSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999999999996 6999999999999999753
No 23
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=4.4e-35 Score=343.62 Aligned_cols=278 Identities=21% Similarity=0.256 Sum_probs=226.4
Q ss_pred CCceEEEEcCCchhHHHHHHHh--cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEE
Q 001492 304 VWPYVIHGHYADAGDSAALLSG--ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVI 381 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~--~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi 381 (1067)
.+||+||+|++.++..++.++. .++.|.++|.|+....... . ...|.. ..+..++.+|.|+
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~-~-----------~~~~~~-----~~~~~~~~ad~vv 179 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE-V-----------LNHYTP-----EYQQLFRRGDLML 179 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch-h-----------hhhhhH-----HHHHHHHhCCEEE
Confidence 5699999999877777777765 4556789999976322100 0 001110 1233578999999
Q ss_pred eCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 382 TSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 382 ~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
++|+...+.+... +.++ .++.+||||+|.+.|.+...
T Consensus 180 ~~S~~~~~~l~~~--g~~~---------------------~ki~vi~nGvd~~~f~~~~~-------------------- 216 (406)
T PRK15427 180 PISDLWAGRLQKM--GCPP---------------------EKIAVSRMGVDMTRFSPRPV-------------------- 216 (406)
T ss_pred ECCHHHHHHHHHc--CCCH---------------------HHEEEcCCCCCHHHcCCCcc--------------------
Confidence 9999777665332 1222 38999999999998864321
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
....+...|+++||+.+.||++.+++|+..+. ...+++.+ |+|+++. ..++.+
T Consensus 217 -------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~--~~~~~~~l~ivG~G~~-----------~~~l~~ 270 (406)
T PRK15427 217 -------------KAPATPLEIISVARLTEKKGLHVAIEACRQLK--EQGVAFRYRILGIGPW-----------ERRLRT 270 (406)
T ss_pred -------------ccCCCCeEEEEEeCcchhcCHHHHHHHHHHHH--hhCCCEEEEEEECchh-----------HHHHHH
Confidence 00123457999999999999999999999985 34567776 8898863 356778
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC------CCCCHHHHHHHHcCCCEEEcCCCCchhhhccC
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALV------EPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL 614 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~------EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~ 614 (1067)
++.++++.++|.|+|+++++++.++|+.| |+||+||.. ||||++++||||||+|||+|+.||..|++.++
T Consensus 271 ~~~~~~l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~ 346 (406)
T PRK15427 271 LIEQYQLEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEAD 346 (406)
T ss_pred HHHHcCCCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCC
Confidence 89999999999999999999999999999 999999974 99999999999999999999999999999999
Q ss_pred CceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHH
Q 001492 615 NNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 615 ~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 671 (1067)
.+|++++|+|+++++++|.++++ |+++++++++++++.+ ++|+|+..++++.++|++
T Consensus 347 ~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 347 KSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999 9999999999999999 599999999999999875
No 24
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.9e-34 Score=335.18 Aligned_cols=366 Identities=21% Similarity=0.221 Sum_probs=263.8
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
+|++|..+. +.||+++++.+|+++|.+.| |+++|++..... . +..
T Consensus 3 ~il~ii~~~-------------~~GG~e~~~~~l~~~l~~~~--~~~~v~~~~~~~-~----~~~--------------- 47 (374)
T TIGR03088 3 LIVHVVYRF-------------DVGGLENGLVNLINHLPADR--YRHAVVALTEVS-A----FRK--------------- 47 (374)
T ss_pred eEEEEeCCC-------------CCCcHHHHHHHHHhhccccc--cceEEEEcCCCC-h----hHH---------------
Confidence 688886333 37999999999999999998 999888752211 0 000
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
.....|+.+++++..+. . .+ .+...+.+ .+.+ .+|||||+|... +..+..+++.
T Consensus 48 ~~~~~~i~~~~~~~~~~------~-~~----~~~~~l~~-------~l~~-------~~~Divh~~~~~-~~~~~~~~~~ 101 (374)
T TIGR03088 48 RIQRPDVAFYALHKQPG------K-DV----AVYPQLYR-------LLRQ-------LRPDIVHTRNLA-ALEAQLPAAL 101 (374)
T ss_pred HHHhcCceEEEeCCCCC------C-Ch----HHHHHHHH-------HHHH-------hCCCEEEEcchh-HHHHHHHHHh
Confidence 01124778887764221 0 01 11111222 2222 469999999753 3334455556
Q ss_pred CCCcE-EEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 327 LNVPM-VLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 327 ~giP~-V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
.++|. +++.|+....... + ....|++.+ +.....+|.++++|+...+.+...+.
T Consensus 102 ~~~~~~i~~~h~~~~~~~~-----~------~~~~~~~~~-----~~~~~~~~~~i~vs~~~~~~~~~~~~--------- 156 (374)
T TIGR03088 102 AGVPARIHGEHGRDVFDLD-----G------SNWKYRWLR-----RLYRPLIHHYVAVSRDLEDWLRGPVK--------- 156 (374)
T ss_pred cCCCeEEEeecCcccccch-----h------hHHHHHHHH-----HHHHhcCCeEEEeCHHHHHHHHHhcC---------
Confidence 67775 5666754211100 0 011222332 23456689999999987776544332
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
.+..++.+||||+|.+.|.+..... . ..........++++|++
T Consensus 157 -------------~~~~~~~vi~ngvd~~~~~~~~~~~---~---------------------~~~~~~~~~~~~~~i~~ 199 (374)
T TIGR03088 157 -------------VPPAKIHQIYNGVDTERFHPSRGDR---S---------------------PILPPDFFADESVVVGT 199 (374)
T ss_pred -------------CChhhEEEeccCccccccCCCccch---h---------------------hhhHhhcCCCCCeEEEE
Confidence 1223899999999998886543100 0 00111123456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccC--CCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRE--LANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDV 562 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~--~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl 562 (1067)
+||+.+.||++.+++|+..+..... .+++.+ ++|+++. ...+.+.++.+++...|.|+|. .+|+
T Consensus 200 vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~ 266 (374)
T TIGR03088 200 VGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGE--RDDV 266 (374)
T ss_pred EecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCC--cCCH
Confidence 9999999999999999998853221 235665 7888764 2456678888999899999996 6799
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHH
Q 001492 563 PEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW 642 (1067)
Q Consensus 563 ~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~ 642 (1067)
..+|+.| |++|+||..||||++++||||||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.+
T Consensus 267 ~~~~~~a----di~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~ 342 (374)
T TIGR03088 267 PALMQAL----DLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAAR 342 (374)
T ss_pred HHHHHhc----CEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 643 VECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 643 ~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
..+++++++.+ ++|||+.++++|.++|+++
T Consensus 343 ~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 343 RAHGAAGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 99999999998 6999999999999999875
No 25
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=3.5e-35 Score=352.65 Aligned_cols=444 Identities=21% Similarity=0.197 Sum_probs=279.2
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCccc-c-----cCCCC
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAE-M-----LTGGP 240 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e-~-----l~~~~ 240 (1067)
||++|+.... ....+||+..++..|+++|+++| |+|+|+++.+..-...+ ...... . .....
T Consensus 1 ~Il~v~~E~~---------p~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~~~~~~-~~~~~~~~~~~~~~~~~~ 68 (476)
T cd03791 1 KVLFVASEVA---------PFAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGRILDEL-RGQLLVLRLFGVPVGGRP 68 (476)
T ss_pred CEEEEEcccc---------ccccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcchhhHh-ccCeEEEEEEeeccCCce
Confidence 5899986543 22479999999999999999999 99999998654311100 000000 0 00000
Q ss_pred CCCCccccccCCeEEEeccCCCCc--cCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhH
Q 001492 241 EDDGIEVGESSGAYIIRIPFGPRD--KYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGD 318 (1067)
Q Consensus 241 ~~~~~~~~~~~gv~i~ri~~~~~~--~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~ 318 (1067)
..........+|+.++++...... ..+......++...+. .+..+.......+.. + ..+|||||+|.|.++.
T Consensus 69 ~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~f~~~~~~~l~~-~----~~~pDviH~hd~~t~~ 142 (476)
T cd03791 69 EYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAE-RFALFSRAALELLRR-L----GWKPDIIHCHDWHTGL 142 (476)
T ss_pred eEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHH-HHHHHHHHHHHHHHh-c----CCCCcEEEECchHHHH
Confidence 000001122367888887652210 0000001111111110 011111111111111 1 2469999999998888
Q ss_pred HHHHHHhcC------CCcEEEEeCCCchhh---HHHHHhhCCCC-hhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHH
Q 001492 319 SAALLSGAL------NVPMVLTGHSLGRNK---LEQLLKQGRQS-KEDINSTYKIMRRIEGEELSLDAAELVITSTKQEI 388 (1067)
Q Consensus 319 ~a~~l~~~~------giP~V~t~H~l~~~~---~~~l~~~g~~~-~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~ 388 (1067)
++.+++... ++|+|+|+|++.... ...+...+... .......+.+...+..++.++..||.|+++|+...
T Consensus 143 ~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~ 222 (476)
T cd03791 143 VPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYA 222 (476)
T ss_pred HHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHH
Confidence 888877663 899999999985422 11111111000 00000011112233457778999999999999888
Q ss_pred HHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcch-h
Q 001492 389 DEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPA-I 467 (1067)
Q Consensus 389 ~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 467 (1067)
+++...+.+.. +...+ .....++.+||||+|.+.|.|... + .+...+.. ........ .
T Consensus 223 ~~i~~~~~~~g--l~~~~-----------~~~~~ki~~I~NGid~~~~~p~~~-~----~~~~~~~~---~~~~~~~~~k 281 (476)
T cd03791 223 REILTPEFGEG--LDGLL-----------RARAGKLSGILNGIDYDVWNPATD-P----HLPANYSA---DDLEGKAENK 281 (476)
T ss_pred HHhCCCCCCcc--hHHHH-----------HhccCCeEEEeCCCcCcccCcccc-c----hhhhcCCc---cccccHHHHH
Confidence 87654322111 01111 112248999999999999987542 1 11000000 00000000 0
Q ss_pred hHhhhhhcc--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHh
Q 001492 468 WSDVMRFLT--NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDK 544 (1067)
Q Consensus 468 ~~~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~ 544 (1067)
...+.++.. .+++++|+++||+.+.||++.+++|+..+.+ .. +. +++|+++. .+...+..++.+
T Consensus 282 ~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~--~~lvi~G~g~~---------~~~~~~~~~~~~ 348 (476)
T cd03791 282 AALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLE--LG--GQLVILGSGDP---------EYEEALRELAAR 348 (476)
T ss_pred HHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHH--cC--cEEEEEecCCH---------HHHHHHHHHHHh
Confidence 112233333 3688999999999999999999999999853 22 44 47788742 233455566665
Q ss_pred cCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCC------ceE
Q 001492 545 YDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALN------NGL 618 (1067)
Q Consensus 545 ~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~------~Gl 618 (1067)
+ .+++.|.+..+.+.+..+|+.| |++|+||.+||||++++|||+||+|||+++.||..|++.++. +|+
T Consensus 349 ~--~~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~ 422 (476)
T cd03791 349 Y--PGRVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGF 422 (476)
T ss_pred C--CCcEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeE
Confidence 5 4678776666667778999999 999999999999999999999999999999999999999987 999
Q ss_pred EeCCCCHHHHHHHHHHhhc---CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 619 LVDPHDQQAIADALLKLVS---EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 619 lv~p~d~~~la~aL~~ll~---d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
+++|.|+++++++|.++++ +++.++++++++++ ..|||+.++++|+++|+
T Consensus 423 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 423 VFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred EeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHh
Confidence 9999999999999999885 67888888777754 47999999999999986
No 26
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1.5e-34 Score=338.82 Aligned_cols=376 Identities=17% Similarity=0.180 Sum_probs=254.4
Q ss_pred HHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcccccccchhH
Q 001492 198 VELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQ 277 (1067)
Q Consensus 198 ~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~ 277 (1067)
.+||++|+++| |+|+++|+.... .. ..|+++++++..+.. .+ ..++|..
T Consensus 14 ~~la~~L~~~G--~~v~~~~~~~~~-~~------------------------~~~v~~~~~~~~~~~---~~-~~~~~~~ 62 (396)
T cd03818 14 RHLAPALAAQG--HEVVFLTEPNAA-PP------------------------PGGVRVVRYRPPRGP---TS-GTHPYLR 62 (396)
T ss_pred HHHHHHHHHCC--CEEEEEecCCCC-CC------------------------CCCeeEEEecCCCCC---CC-CCCccch
Confidence 56999999999 999999985311 00 016899998865441 11 4667777
Q ss_pred HHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHH-HhhCCCChh
Q 001492 278 EFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQL-LKQGRQSKE 355 (1067)
Q Consensus 278 ~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l-~~~g~~~~~ 355 (1067)
.|...+..... +.+.+.... .++++|||||+|.... .+..+... .++|+|.++|.++....... +.......
T Consensus 63 ~~~~~~~~~~~-~~~~~~~~~--~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~- 136 (396)
T cd03818 63 EFEEAVLRGQA-VARALLALR--AKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPS- 136 (396)
T ss_pred hHHHHHHHHHH-HHHHHHHHH--hcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCc-
Confidence 77654443222 122222211 1246799999997532 12233333 46999987765432210000 00000000
Q ss_pred hhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCC
Q 001492 356 DINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSN 435 (1067)
Q Consensus 356 ~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~ 435 (1067)
. ....++..+.......+..||.||++|+...+.+...+. .++.|||||+|.+.
T Consensus 137 ~-~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~-------------------------~ki~vI~ngvd~~~ 190 (396)
T cd03818 137 L-DDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR-------------------------SRISVIHDGIDTDR 190 (396)
T ss_pred h-hHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc-------------------------cceEEeCCCccccc
Confidence 0 001111111112346789999999999977665432221 28999999999999
Q ss_pred ccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcE
Q 001492 436 VVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSR-PDPKKNITTLLKAFGECRPLRELANL 514 (1067)
Q Consensus 436 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR-ld~~Kgi~~ll~A~~~l~~l~~~~~l 514 (1067)
|.+.... ..... ......++.++|+++|| +.+.||++.+++|+..+. ...+++
T Consensus 191 f~~~~~~---~~~~~---------------------~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~--~~~~~~ 244 (396)
T cd03818 191 LRPDPQA---RLRLP---------------------NGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLL--RARPDA 244 (396)
T ss_pred cCCCchh---hhccc---------------------ccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHH--HHCCCc
Confidence 8765410 00000 00112356789999998 999999999999999885 345677
Q ss_pred EE-EEecCC-ChhhhhccchHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHH
Q 001492 515 TL-IMGNRD-DIEEMSSGNASVLITVLKLID-KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIE 591 (1067)
Q Consensus 515 ~l-IvG~~~-~~~~l~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllE 591 (1067)
.+ |+|++. .+.........+...+.+... +++ .++|.|+|+++.++++.+|+.| |++|+||..|+||++++|
T Consensus 245 ~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~a----dv~v~~s~~e~~~~~llE 319 (396)
T cd03818 245 RVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVS----DVHVYLTYPFVLSWSLLE 319 (396)
T ss_pred EEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhC----cEEEEcCcccccchHHHH
Confidence 65 777632 111100011112233322222 222 4789999999999999999999 999999999999999999
Q ss_pred HHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHH
Q 001492 592 AAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLT 667 (1067)
Q Consensus 592 AmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~-~fsw~~~a~~~l~ 667 (1067)
|||||+|||+|+.||..|++.++.+|+++++.|+++++++|.+++++++++.++++++++.++ +|||+.++++|++
T Consensus 320 AmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 320 AMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999995 7999999998863
No 27
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=7.5e-34 Score=330.87 Aligned_cols=369 Identities=16% Similarity=0.207 Sum_probs=263.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||+|++.--+ |+ | ....||+++++.++++.|+ ++|+++|.... .|.. .|
T Consensus 4 ~~~~~~~~~~----~~--p-~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~------~~~~-~~------------ 52 (380)
T PRK15484 4 KIIFTVTPIF----SI--P-PRGAAAVETWIYQVAKRTS-----IPNRIACIKNP------GYPE-YT------------ 52 (380)
T ss_pred eEEEEeccCC----CC--C-CccccHHHHHHHHhhhhcc-----CCeeEEEecCC------CCCc-hh------------
Confidence 7899887665 22 1 1248999999999999994 58999998542 1111 00
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchh--HHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHH
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYI--QEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLS 324 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l--~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~ 324 (1067)
...+|+.++++++... |......|-.+ ..+...++..+.. ....++||||+|... .....+..
T Consensus 53 -~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~vi~v~~~~-~~~~~~~~ 117 (380)
T PRK15484 53 -KVNDNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAHK-----------FTITKDSVIVIHNSM-KLYRQIRE 117 (380)
T ss_pred -hccCCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHHh-----------cCCCCCcEEEEeCcH-HhHHHHHh
Confidence 1124677777755221 11100111000 1222222222111 112459999999853 33444455
Q ss_pred hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHH
Q 001492 325 GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEK 404 (1067)
Q Consensus 325 ~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 404 (1067)
+..+.|+|++.|+.+... .+..++.+|++|+...+.+...+.
T Consensus 118 ~~~~~~~v~~~h~~~~~~------------------------------~~~~~~~ii~~S~~~~~~~~~~~~-------- 159 (380)
T PRK15484 118 RAPQAKLVMHMHNAFEPE------------------------------LLDKNAKIIVPSQFLKKFYEERLP-------- 159 (380)
T ss_pred hCCCCCEEEEEecccChh------------------------------HhccCCEEEEcCHHHHHHHHhhCC--------
Confidence 566789999999752111 134678999999877665433221
Q ss_pred HHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEE
Q 001492 405 VLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMIL 484 (1067)
Q Consensus 405 ~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 484 (1067)
..++.+||||+|...|.+... .....++...+++++|+
T Consensus 160 ----------------~~~i~vIpngvd~~~~~~~~~--------------------------~~~~~~~~~~~~~~~il 197 (380)
T PRK15484 160 ----------------NADISIVPNGFCLETYQSNPQ--------------------------PNLRQQLNISPDETVLL 197 (380)
T ss_pred ----------------CCCEEEecCCCCHHHcCCcch--------------------------HHHHHHhCCCCCCeEEE
Confidence 137899999999987764321 00112233445678999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHH
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVP 563 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~ 563 (1067)
++||+.+.||++.|++|+..+. ...|++.+ |+|+++.... .+...+...+.+++..++ .+|.|.|+++.+++.
T Consensus 198 ~~Grl~~~Kg~~~Li~A~~~l~--~~~p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~ 271 (380)
T PRK15484 198 YAGRISPDKGILLLMQAFEKLA--TAHSNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMH 271 (380)
T ss_pred EeccCccccCHHHHHHHHHHHH--HhCCCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHH
Confidence 9999999999999999999985 45677776 7888753211 112345667777777765 479999999999999
Q ss_pred HHHHHhhcCCcEEEecCCC-CCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceE-EeCCCCHHHHHHHHHHhhcCHHH
Q 001492 564 EIYRLAAKTKGVFINPALV-EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGL-LVDPHDQQAIADALLKLVSEKNL 641 (1067)
Q Consensus 564 ~ly~~A~~~~dV~v~ps~~-EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gl-lv~p~d~~~la~aL~~ll~d~~~ 641 (1067)
.+|+.| |++|+||.+ |+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.++++|+++
T Consensus 272 ~~~~~a----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~ 347 (380)
T PRK15484 272 NYYPLA----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL 347 (380)
T ss_pred HHHHhC----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH
Confidence 999999 999999975 999999999999999999999999999999999998 56899999999999999999986
Q ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 642 WVECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 642 ~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
.++++++++.+ ++|||+.++++|++.|+..
T Consensus 348 -~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 348 -TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred -HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 67999999887 6999999999999999864
No 28
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=5.5e-34 Score=332.98 Aligned_cols=385 Identities=19% Similarity=0.217 Sum_probs=264.4
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||+++.... ..||.++++.+||++|+++| |+|+|+|...... ..+.+
T Consensus 1 mkIl~~~~~~-------------~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~---~~~~~-------------- 48 (392)
T cd03805 1 LRVAFIHPDL-------------GIGGAERLVVDAALALQSRG--HEVTIYTSHHDPS---HCFEE-------------- 48 (392)
T ss_pred CeEEEECCCC-------------CCchHHHHHHHHHHHHHhCC--CeEEEEcCCCCch---hcchh--------------
Confidence 7899996332 27899999999999999999 9999999742110 00000
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
. ...++.+..++. ++++. ++.....+.. .+..+...+...+. ...+||+||+|....+..+. ..
T Consensus 49 -~-~~~~~~i~~~~~-----~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~Dvi~~~~~~~~~~~~--~~ 112 (392)
T cd03805 49 -T-KDGTLPVRVRGD-----WLPRS-IFGRFHILCA----YLRMLYLALYLLLL--PDEKYDVFIVDQVSACVPLL--KL 112 (392)
T ss_pred -c-cCCeeEEEEEeE-----EEcch-hhHhHHHHHH----HHHHHHHHHHHHhc--ccCCCCEEEEcCcchHHHHH--HH
Confidence 0 011243333221 11111 1111111111 11111111100000 12469999999764433322 22
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhH-HHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYK-IMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEK 404 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~-~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 404 (1067)
..+.|+|++.|... . .... ........++ ++.. .|+..++.||.|+++|+...+.+...+.....
T Consensus 113 ~~~~~~i~~~h~~~--~---~~~~---~~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~---- 178 (392)
T cd03805 113 FSPSKILFYCHFPD--Q---LLAQ---RGSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAK---- 178 (392)
T ss_pred hcCCcEEEEEecCh--H---HhcC---CCcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhccccc----
Confidence 23489999999432 1 1111 0111112222 2223 37788999999999999877766555433211
Q ss_pred HHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEE
Q 001492 405 VLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMIL 484 (1067)
Q Consensus 405 ~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 484 (1067)
..+.|||||+|.+.|.+..... . .......++.++|+
T Consensus 179 -----------------~~~~vi~n~vd~~~~~~~~~~~----~----------------------~~~~~~~~~~~~i~ 215 (392)
T cd03805 179 -----------------NPREVVYPCVDTDSFESTSEDP----D----------------------PGLLIPKSGKKTFL 215 (392)
T ss_pred -----------------CCcceeCCCcCHHHcCcccccc----c----------------------ccccccCCCceEEE
Confidence 1346999999998886543100 0 01112345678999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCC---CcEEE-EEecCCChhhhhccchHHHHHHHHHHHh-cCCCCcEEeCCCCCC
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLREL---ANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDK-YDLYGQVAYPKHHKQ 559 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~---~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~-~~l~~~V~~~g~~~~ 559 (1067)
++||+.+.||++.+++|+.++.. .. +++.+ ++|+++.. .....++..++..++++ +++.++|.|+|+++.
T Consensus 216 ~~grl~~~Kg~~~ll~a~~~l~~--~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~ 290 (392)
T cd03805 216 SINRFERKKNIALAIEAFAILKD--KLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLPSISD 290 (392)
T ss_pred EEeeecccCChHHHHHHHHHHHh--hcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeCCCCh
Confidence 99999999999999999999853 33 56665 78876532 11224566788899999 899999999999999
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCH
Q 001492 560 YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEK 639 (1067)
Q Consensus 560 ~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~ 639 (1067)
+++..+|+.| |++++||..|+||++++||||||+|||+|+.||+.|++.++.+|+++++ |+++++++|.++++++
T Consensus 291 ~~~~~~l~~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~ 365 (392)
T cd03805 291 SQKELLLSSA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP 365 (392)
T ss_pred HHHHHHHhhC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh
Confidence 9999999999 9999999999999999999999999999999999999999999999976 8999999999999999
Q ss_pred HHHHHHHHHHHHHH-HcCCHHHHHHHH
Q 001492 640 NLWVECRKNGWKNI-HLFSWPEHCRTY 665 (1067)
Q Consensus 640 ~~~~~~~~~~~~~~-~~fsw~~~a~~~ 665 (1067)
++++++++++++.+ ++|||+.+++++
T Consensus 366 ~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 366 DLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 99999999999998 599999998764
No 29
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=1.3e-33 Score=344.04 Aligned_cols=395 Identities=15% Similarity=0.091 Sum_probs=263.5
Q ss_pred ccCCCce-EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCC--Ce----------eEEEEEecCCCCCCCC
Q 001492 160 DKKEKKL-YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMP--GV----------YRVDLFSRQVSSPEVD 226 (1067)
Q Consensus 160 ~~~~~~m-~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G--~v----------~~V~v~t~~~~~~~~~ 226 (1067)
+....+. ||++|.... ..||.++++..||.+|.+++ +. ..|.+++.......
T Consensus 275 ~~~~~~~~rIl~vi~sl-------------~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~-- 339 (694)
T PRK15179 275 AGPESFVGPVLMINGSL-------------GAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGA-- 339 (694)
T ss_pred CCCCCCcceEEEEeCCC-------------CCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCc--
Confidence 4445666 899997322 37899999999999999984 00 23444432110000
Q ss_pred CcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccccc-ccchhHHH---H-HHHHHHHHHHhHHHHhhhcCC
Q 001492 227 WSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKEL-LWPYIQEF---V-DGALAHCLNMSKVLGEQIGGG 301 (1067)
Q Consensus 227 ~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~-l~~~l~~f---~-~~~l~~~~~~~~~L~~~~~~~ 301 (1067)
..|. +.+ ...|+.++.++..+. ....... ....+..+ . ......+.++.+.+.+
T Consensus 340 ~~~~---~~L------------~~~Gv~v~~l~~~~~-~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~----- 398 (694)
T PRK15179 340 DFFA---ATL------------ADAGIPVSVYSDMQA-WGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS----- 398 (694)
T ss_pred chHH---HHH------------HhCCCeEEEeccCCc-cCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH-----
Confidence 0000 011 124777777754332 1111100 00011100 0 0122223333333333
Q ss_pred CCCCceEEEEcCCchhHHHHHHHhcCCCcEEE-EeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEE
Q 001492 302 QPVWPYVIHGHYADAGDSAALLSGALNVPMVL-TGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELV 380 (1067)
Q Consensus 302 ~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~-t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~V 380 (1067)
.+|||||+|...+..++.++++..++|+|+ +.|++........ ....|....+ ......++.+
T Consensus 399 --~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~~~----------~~~~~~~l~~----~l~~~~~~i~ 462 (694)
T PRK15179 399 --SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDR----------YRVEYDIIYS----ELLKMRGVAL 462 (694)
T ss_pred --cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccchhH----------HHHHHHHHHH----HHHhcCCeEE
Confidence 579999999987778888888888999976 5676532211100 0111211111 1112345667
Q ss_pred EeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCC
Q 001492 381 ITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSS 460 (1067)
Q Consensus 381 i~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1067)
++.|....+.+...+. .+..++.|||||||...|.+... ....
T Consensus 463 Vs~S~~~~~~l~~~~g----------------------~~~~kI~VI~NGVd~~~f~~~~~---~~~~------------ 505 (694)
T PRK15179 463 SSNSQFAAHRYADWLG----------------------VDERRIPVVYNGLAPLKSVQDDA---CTAM------------ 505 (694)
T ss_pred EeCcHHHHHHHHHHcC----------------------CChhHEEEECCCcCHHhcCCCch---hhHH------------
Confidence 7777766555433322 22248999999999888754221 0000
Q ss_pred CCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHH
Q 001492 461 PKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVL 539 (1067)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~ 539 (1067)
+... +.....+.++|+++||+.+.||++.+++||..+. ...+++.+ |+|+++. ...+.
T Consensus 506 -------~~~~-~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~--~~~p~~~LvIvG~G~~-----------~~~L~ 564 (694)
T PRK15179 506 -------MAQF-DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFA--ASHPKVRFIMVGGGPL-----------LESVR 564 (694)
T ss_pred -------HHhh-ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHH--HHCcCeEEEEEccCcc-----------hHHHH
Confidence 0000 0112345678999999999999999999999884 45577776 8898764 35577
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEE
Q 001492 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLL 619 (1067)
Q Consensus 540 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gll 619 (1067)
++++++++.++|.|+|+. ++++.+|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++
T Consensus 565 ~l~~~lgL~~~V~flG~~--~dv~~ll~aa----Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlL 638 (694)
T PRK15179 565 EFAQRLGMGERILFTGLS--RRVGYWLTQF----NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLT 638 (694)
T ss_pred HHHHHcCCCCcEEEcCCc--chHHHHHHhc----CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEE
Confidence 889999999999999995 5899999999 9999999999999999999999999999999999999999999999
Q ss_pred eCCCCH--HHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 620 VDPHDQ--QAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 620 v~p~d~--~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
|+|+|. ++++++|.+++.+......+++++++++ ++|||+.++++|+++|+
T Consensus 639 v~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 639 LPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred eCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 998774 6899999998887666667888999988 59999999999999995
No 30
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.4e-32 Score=316.37 Aligned_cols=359 Identities=19% Similarity=0.216 Sum_probs=255.5
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.+++ .|..||+++++.+|+++|.++| |+|+|+|........
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~~--------------------- 47 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQK--------------------- 47 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCCc---------------------
Confidence 6899987776 2678999999999999999999 999999985321110
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
....+|+.++++|..... . +..+...+ ..+.+.+.. ..++|+||...+.. ..+..+.+.
T Consensus 48 ~~~~~~i~~~~~~~~~~~-~---------~~~~~~~~----~~~~~~~~~------~~~~~~i~~~~~~~-~~~~~~~~~ 106 (363)
T cd04955 48 ETEYNGVRLIHIPAPEIG-G---------LGTIIYDI----LAILHALFV------KRDIDHVHALGPAI-APFLPLLRL 106 (363)
T ss_pred ccccCCceEEEcCCCCcc-c---------hhhhHHHH----HHHHHHHhc------cCCeEEEEecCccH-HHHHHHHHh
Confidence 012358888888753210 0 00111111 111111110 13466776665544 333444555
Q ss_pred CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHH
Q 001492 327 LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVL 406 (1067)
Q Consensus 327 ~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l 406 (1067)
.++|+|++.|+...... .+.. ....+.+. .|+..++.+|.|+++|+...+.+...|+.
T Consensus 107 ~~~~~v~~~h~~~~~~~-------~~~~----~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------- 164 (363)
T cd04955 107 KGKKVVVNMDGLEWKRA-------KWGR----PAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR--------- 164 (363)
T ss_pred cCCCEEEEccCcceeec-------cccc----chhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC---------
Confidence 69999999998743221 0000 01122222 35667899999999999877765444432
Q ss_pred HHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEE
Q 001492 407 RARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILAL 486 (1067)
Q Consensus 407 ~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 486 (1067)
+..+||||+|...+.+.. . ...... .+..+.|+++
T Consensus 165 ----------------~~~~i~ngv~~~~~~~~~-------~---------------------~~~~~~-~~~~~~i~~~ 199 (363)
T cd04955 165 ----------------DSTYIPYGADHVVSSEED-------E---------------------ILKKYG-LEPGRYYLLV 199 (363)
T ss_pred ----------------CCeeeCCCcChhhcchhh-------h---------------------hHHhcC-CCCCcEEEEE
Confidence 238999999987665311 0 001111 2334578999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHH
Q 001492 487 SRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLID-KYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 487 gRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
||+.+.||++.+++|+.++.. ++. +++|+++.... +...+. .++..++|.|+|+++.+++..
T Consensus 200 G~~~~~Kg~~~li~a~~~l~~-----~~~l~ivG~~~~~~~-----------~~~~~~~~~~~~~~V~~~g~~~~~~~~~ 263 (363)
T cd04955 200 GRIVPENNIDDLIEAFSKSNS-----GKKLVIVGNADHNTP-----------YGKLLKEKAAADPRIIFVGPIYDQELLE 263 (363)
T ss_pred ecccccCCHHHHHHHHHhhcc-----CceEEEEcCCCCcch-----------HHHHHHHHhCCCCcEEEccccChHHHHH
Confidence 999999999999999998842 344 48888754322 222222 567788999999999999999
Q ss_pred HHHHhhcCCcEEEecCCC-CCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHH
Q 001492 565 IYRLAAKTKGVFINPALV-EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWV 643 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~-EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~ 643 (1067)
+|..| |++++||.. |+||++++||||||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++++++.+.
T Consensus 264 ~~~~a----d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~ 335 (363)
T cd04955 264 LLRYA----ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVS 335 (363)
T ss_pred HHHhC----CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHH
Confidence 99999 999999998 9999999999999999999999999999875 7999988776 9999999999999999
Q ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 001492 644 ECRKNGWKNIH-LFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 644 ~~~~~~~~~~~-~fsw~~~a~~~l~~~~ 670 (1067)
++++++++.+. .|||+.++++|+++|+
T Consensus 336 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 336 AMAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999985 8999999999999874
No 31
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=4.6e-33 Score=321.66 Aligned_cols=278 Identities=28% Similarity=0.390 Sum_probs=225.7
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||+||+|....+..+..+++.+|+|+|++.|+.......... ... .++..+. .++..++.+|.|+++
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~---~~~------~~~~~~~--~~~~~~~~~d~ii~~ 149 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL---LRS------RWALYAR--RRRRLARRAALFIAV 149 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh---ccc------chhHHHH--HHHHHHHhcCEEEEC
Confidence 56999999987777778888888999999999975332211110 000 0111222 245668999999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+... +.+ ..++.++|||+|.+.|.+..
T Consensus 150 s~~~~~~~~~~--~~~---------------------~~~i~vi~~g~d~~~~~~~~----------------------- 183 (367)
T cd05844 150 SQFIRDRLLAL--GFP---------------------PEKVHVHPIGVDTAKFTPAT----------------------- 183 (367)
T ss_pred CHHHHHHHHHc--CCC---------------------HHHeEEecCCCCHHhcCCCC-----------------------
Confidence 99877665432 222 23899999999998776432
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
...+.+.|+++||+.+.||++.+++|+..+. +..+++.+ ++|+++. ..++..++
T Consensus 184 ------------~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~--~~~~~~~l~ivG~g~~-----------~~~~~~~~ 238 (367)
T cd05844 184 ------------PARRPPRILFVGRFVEKKGPLLLLEAFARLA--RRVPEVRLVIIGDGPL-----------LAALEALA 238 (367)
T ss_pred ------------CCCCCcEEEEEEeeccccChHHHHHHHHHHH--HhCCCeEEEEEeCchH-----------HHHHHHHH
Confidence 1234578999999999999999999999985 34567776 7887652 34567788
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC------CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCc
Q 001492 543 DKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL------VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNN 616 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~------~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~ 616 (1067)
+.+++.++|.|.|+++.+++..+|+.| |++|+||. .|+||++++||||||+|||+++.|+..|++.++.+
T Consensus 239 ~~~~~~~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~ 314 (367)
T cd05844 239 RALGLGGRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGET 314 (367)
T ss_pred HHcCCCCeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCe
Confidence 888888999999999999999999999 99999997 59999999999999999999999999999999999
Q ss_pred eEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHH
Q 001492 617 GLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLT 667 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~ 667 (1067)
|+++++.|+++++++|.+++++++++++++.++++.+ ++|||+.+++++.+
T Consensus 315 g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 315 GLLVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred eEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999999999999999998 59999999998875
No 32
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=2.3e-32 Score=318.47 Aligned_cols=291 Identities=15% Similarity=0.135 Sum_probs=214.4
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEE-eCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLT-GHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t-~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+|||||+|...+...+.+.+...|+|++++ .|+.+....... ....|...++- ......+| +++
T Consensus 279 ~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~~~r~----------~~~e~~~~~~a---~~i~~~sd-~v~ 344 (578)
T PRK15490 279 RKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVVRKRL----------FKPEYEPLYQA---LAVVPGVD-FMS 344 (578)
T ss_pred cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcchhhH----------HHHHHHHhhhh---ceeEecch-hhh
Confidence 6799999998776677777777779999654 665322110000 01111111110 12244455 556
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
.+....+.+...+ +.++ .|+.|||||+|...|.+....+ .
T Consensus 345 ~s~~v~~~l~~~l-gip~---------------------~KI~VIyNGVD~~rf~p~~~~~---~--------------- 384 (578)
T PRK15490 345 NNHCVTRHYADWL-KLEA---------------------KHFQVVYNGVLPPSTEPSSEVP---H--------------- 384 (578)
T ss_pred ccHHHHHHHHHHh-CCCH---------------------HHEEEEeCCcchhhcCccchhh---H---------------
Confidence 6665444443332 2233 4999999999999887643100 0
Q ss_pred CcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKL 541 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l 541 (1067)
..+... +...+++.++|+++||+.+.||...+++++..+. ...|++.+ |+|+++. ..++..+
T Consensus 385 ---~~r~~~-~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~ll--k~~pdirLvIVGdG~~-----------~eeLk~l 447 (578)
T PRK15490 385 ---KIWQQF-TQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYL--QHHPATRFVLVGDGDL-----------RAEAQKR 447 (578)
T ss_pred ---HHHHHh-hhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHH--hHCCCeEEEEEeCchh-----------HHHHHHH
Confidence 001111 1112345678999999999999999999998874 44577775 8898764 3567788
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeC
Q 001492 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVD 621 (1067)
Q Consensus 542 ~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 621 (1067)
+.++++.++|.|+|+ .+|++.+|+.+ |+||+||.+||||++++||||||+|||+|+.||..|+|.++.+|++|+
T Consensus 448 a~elgL~d~V~FlG~--~~Dv~~~LaaA----DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp 521 (578)
T PRK15490 448 AEQLGILERILFVGA--SRDVGYWLQKM----NVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILD 521 (578)
T ss_pred HHHcCCCCcEEECCC--hhhHHHHHHhC----CEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEEC
Confidence 999999999999998 57999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHH---HHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHH
Q 001492 622 PHDQQAIADAL---LKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 622 p~d~~~la~aL---~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 671 (1067)
+.|++++++++ .++....+.+..+++++++.+ ++|||+.++++|+++|+.
T Consensus 522 ~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 522 DAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 99999988887 445555566667889999999 599999999999999974
No 33
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=4.7e-33 Score=323.50 Aligned_cols=284 Identities=19% Similarity=0.242 Sum_probs=207.9
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+|||||+|++.... ...+.+..++|+|++.|+...... ...+++.+ ..+..+|.+++.
T Consensus 84 ~~~Dvv~~h~~~~~~-~~~~~~~~~~~~i~~~H~~~~~~~--------------~~~~~~~~------~~~~~~d~~i~~ 142 (372)
T cd03792 84 LDADVVVIHDPQPLA-LPLFKKKRGRPWIWRCHIDLSSPN--------------RRVWDFLQ------PYIEDYDAAVFH 142 (372)
T ss_pred CCCCEEEECCCCchh-HHHhhhcCCCeEEEEeeeecCCCc--------------HHHHHHHH------HHHHhCCEEeec
Confidence 469999999875322 223333348999999997532110 11122222 346788999988
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
+...+. .++. ..++ +||||+|..........+
T Consensus 143 ~~~~~~----------------------~~~~-----~~~~-vipngvd~~~~~~~~~~~-------------------- 174 (372)
T cd03792 143 LPEYVP----------------------PQVP-----PRKV-IIPPSIDPLSGKNRELSP-------------------- 174 (372)
T ss_pred HHHhcC----------------------CCCC-----CceE-EeCCCCCCCccccCCCCH--------------------
Confidence 843221 1111 1244 999999975322111000
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
......+.++...+++++|+++||+.+.||++.+++|+..+.+ ..+++.| ++|+++..+.. ....+.++.
T Consensus 175 -~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~--~~~~~~l~i~G~g~~~~~~------~~~~~~~~~ 245 (372)
T cd03792 175 -ADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKE--RVPDPQLVLVGSGATDDPE------GWIVYEEVL 245 (372)
T ss_pred -HHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHh--hCCCCEEEEEeCCCCCCch------hHHHHHHHH
Confidence 0011223345556788999999999999999999999998853 3355554 88887542111 112233444
Q ss_pred HhcCCCCcEEeCCCC--CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEe
Q 001492 543 DKYDLYGQVAYPKHH--KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV 620 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~--~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 620 (1067)
+..++.++|.|.|.. +.+++..+|+.| |+|++||.+||||++++||||||+|||+|+.||..+++.++.+|+++
T Consensus 246 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~a----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~ 321 (372)
T cd03792 246 EYAEGDPDIHVLTLPPVSDLEVNALQRAS----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV 321 (372)
T ss_pred HHhCCCCCeEEEecCCCCHHHHHHHHHhC----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe
Confidence 456777889998876 788999999999 99999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHH
Q 001492 621 DPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 621 ~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 671 (1067)
+ +.++++.+|.+++++++++++|++++++.+ +.|||+..+++|+++|+.
T Consensus 322 ~--~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 322 D--TVEEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred C--CcHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 7 467899999999999999999999999998 599999999999999975
No 34
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=5.4e-32 Score=310.87 Aligned_cols=342 Identities=25% Similarity=0.306 Sum_probs=255.5
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
.||+++++.+|+++|+++| |+|++++...... . .....++.++.++.....
T Consensus 9 ~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~~~~-------~---------------~~~~~~~~~~~~~~~~~~----- 59 (355)
T cd03819 9 SGGVERGTLELARALVERG--HRSLVASAGGRLV-------A---------------ELEAEGSRHIKLPFISKN----- 59 (355)
T ss_pred cCcHHHHHHHHHHHHHHcC--CEEEEEcCCCchH-------H---------------HHHhcCCeEEEccccccc-----
Confidence 5899999999999999999 9999998632100 0 011236677776653321
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQ 349 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~ 349 (1067)
.+..+ .+ +..+.+.+.+ .+||+||+|.....+.+.++++..++|+|++.|+.+....
T Consensus 60 --~~~~~-~~-------~~~l~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------ 116 (355)
T cd03819 60 --PLRIL-LN-------VARLRRLIRE-------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF------ 116 (355)
T ss_pred --hhhhH-HH-------HHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH------
Confidence 11111 11 1111222222 5699999999877777777778889999999998743220
Q ss_pred CCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC
Q 001492 350 GRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429 (1067)
Q Consensus 350 g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn 429 (1067)
+ .+..+..+|.+++.|+...+.+...++ .+..++.+|||
T Consensus 117 -------------~------~~~~~~~~~~vi~~s~~~~~~~~~~~~----------------------~~~~k~~~i~n 155 (355)
T cd03819 117 -------------R------YNAIMARGDRVIAVSNFIADHIRENYG----------------------VDPDRIRVIPR 155 (355)
T ss_pred -------------H------HHHHHHhcCEEEEeCHHHHHHHHHhcC----------------------CChhhEEEecC
Confidence 1 122357899999999987766543332 22248999999
Q ss_pred CCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc
Q 001492 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLR 509 (1067)
Q Consensus 430 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~ 509 (1067)
|+|...|.+..... ......+.++...++.++|+++||+.+.||++.+++++..+..
T Consensus 156 gi~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~-- 212 (355)
T cd03819 156 GVDLDRFDPGAVPP---------------------ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKK-- 212 (355)
T ss_pred CccccccCccccch---------------------HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHh--
Confidence 99998886543100 0000122333445677899999999999999999999999853
Q ss_pred CCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-CCCCCCH
Q 001492 510 ELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPA-LVEPFGL 587 (1067)
Q Consensus 510 ~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps-~~Egfgl 587 (1067)
..+++.+ |+|+++..+ .+...+.+.+.++++.++|.|+|+ .+++..+|+.| |++++|| ..|+||+
T Consensus 213 ~~~~~~l~ivG~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~ 279 (355)
T cd03819 213 DDPDVHLLIVGDAQGRR-------FYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGR 279 (355)
T ss_pred cCCCeEEEEEECCcccc-------hHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCch
Confidence 3456666 788876432 234566678888898899999999 78999999999 9999999 7899999
Q ss_pred HHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHH-HcCCHHH
Q 001492 588 TLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNI-HLFSWPE 660 (1067)
Q Consensus 588 tllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~-~~fsw~~ 660 (1067)
+++||||||+|||+++.||..|++.++.+|++++++|+++++++|..++. +++++.++++++++.+ ++|||+.
T Consensus 280 ~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 280 TAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred HHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999975554 8999999999999999 5999975
No 35
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=4.5e-32 Score=324.88 Aligned_cols=293 Identities=22% Similarity=0.289 Sum_probs=235.2
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHH-HHHhhCCCChhhhh-hHhHHHHhHHHhhcccccCCEE
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLE-QLLKQGRQSKEDIN-STYKIMRRIEGEELSLDAAELV 380 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~-~l~~~g~~~~~~i~-~~y~~~~ri~~E~~~l~~Ad~V 380 (1067)
.++||||+|.. .++..+.++++..|+|+|+|.|+.+..... .+....+ ...... ...++++. .++.+++.||.|
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~--l~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADW-EMSYFRRLWIRFFES--LGRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhccc-chHHHHHHHHHHHHH--HHHHHHHhCCEE
Confidence 36899999975 577888888999999999999997653321 1211111 111111 11222333 367789999999
Q ss_pred EeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCC
Q 001492 381 ITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSS 460 (1067)
Q Consensus 381 i~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1067)
++.|+...+.+... +.++ .++.|||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~~~--g~~~---------------------~ki~vIpNgid~~~f~~~~~~------------------ 287 (475)
T cd03813 249 TTLYEGNRERQIED--GADP---------------------EKIRVIPNGIDPERFAPARRA------------------ 287 (475)
T ss_pred EecCHHHHHHHHHc--CCCH---------------------HHeEEeCCCcCHHHcCCcccc------------------
Confidence 99999776554321 1222 389999999999988654310
Q ss_pred CCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHH
Q 001492 461 PKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVL 539 (1067)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~ 539 (1067)
...++.++|+++||+.+.||++.+++|+..+. ...|++.+ |+|+++.. ..+..++.
T Consensus 288 --------------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~--~~~p~~~l~IvG~g~~~-------~~~~~e~~ 344 (475)
T cd03813 288 --------------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVR--KKIPDAEGWVIGPTDED-------PEYAEECR 344 (475)
T ss_pred --------------ccCCCCcEEEEEeccccccCHHHHHHHHHHHH--HhCCCeEEEEECCCCcC-------hHHHHHHH
Confidence 01346789999999999999999999999985 34678876 88887522 34577888
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc------
Q 001492 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA------ 613 (1067)
Q Consensus 540 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~------ 613 (1067)
++++++++.++|.|+| .+++.++|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.+
T Consensus 345 ~li~~l~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~ 417 (475)
T cd03813 345 ELVESLGLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEAL 417 (475)
T ss_pred HHHHHhCCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCccccc
Confidence 9999999999999999 57999999999 9999999999999999999999999999999999999998
Q ss_pred CCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 001492 614 LNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 614 ~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~-~fsw~~~a~~~l~~~~ 670 (1067)
+.+|++++|.|+++++++|.+++++++.++++++++++.++ .|+|+.++++|.++|+
T Consensus 418 g~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 418 GPAGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 56999999999999999999999999999999999999994 8999999999999884
No 36
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=7.9e-32 Score=308.59 Aligned_cols=362 Identities=23% Similarity=0.243 Sum_probs=261.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.... |..||.+.++..|+++|.++| |+|++++.....+... +
T Consensus 1 kIl~i~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~--~----------------- 48 (364)
T cd03814 1 RIAIVTDTFL-----------PQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEG--P----------------- 48 (364)
T ss_pred CeEEEecccC-----------ccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccC--C-----------------
Confidence 5888885543 567999999999999999999 9999999853211100 0
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-hhHHHHHHHh
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-AGDSAALLSG 325 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a~~~a~~l~~ 325 (1067)
.....+..++.... ....+.. .....+.. .+. ..+||+||+|... .+..+..+++
T Consensus 49 ---~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~-------~~~-------~~~pdii~~~~~~~~~~~~~~~~~ 104 (364)
T cd03814 49 ---ARVVPVPSVPLPGY----PEIRLAL---PPRRRVRR-------LLD-------AFAPDVVHIATPGPLGLAALRAAR 104 (364)
T ss_pred ---CCceeecccccCcc----cceEecc---cchhhHHH-------HHH-------hcCCCEEEEeccchhhHHHHHHHH
Confidence 01122222221111 0000000 00001111 111 1569999998763 4566677778
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|++++.|+.+........ .. ...++... .++..++.+|.+++.|+...+.+...+.
T Consensus 105 ~~~~~~i~~~~~~~~~~~~~~~------~~---~~~~~~~~--~~~~~~~~~d~i~~~s~~~~~~~~~~~~--------- 164 (364)
T cd03814 105 RLGIPVVTSYHTDFPEYLRYYG------LG---PLSWLAWA--YLRWFHNRADRVLVPSPSLADELRARGF--------- 164 (364)
T ss_pred HcCCCEEEEEecChHHHhhhcc------cc---hHhHhhHH--HHHHHHHhCCEEEeCCHHHHHHHhccCC---------
Confidence 8899999999987553322110 00 01111111 2455688999999999987764322211
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
.++.++|+|+|...|.+..... .....+. ..+++.|++
T Consensus 165 ----------------~~~~~~~~g~~~~~~~~~~~~~-------------------------~~~~~~~-~~~~~~i~~ 202 (364)
T cd03814 165 ----------------RRVRLWPRGVDTELFHPRRRDE-------------------------ALRARLG-PPDRPVLLY 202 (364)
T ss_pred ----------------CceeecCCCccccccCcccccH-------------------------HHHHHhC-CCCCeEEEE
Confidence 2789999999998886543100 0111121 345678999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+||+.+.||++.+++++..+.. . +++.+ ++|++++.+.+ . +..++|.|.|+++.+++..
T Consensus 203 ~G~~~~~k~~~~~i~~~~~l~~--~-~~~~l~i~G~~~~~~~~-----------~------~~~~~v~~~g~~~~~~~~~ 262 (364)
T cd03814 203 VGRLAPEKNLEALLDADLPLRR--R-PPVRLVIVGDGPARARL-----------E------ARYPNVHFLGFLDGEELAA 262 (364)
T ss_pred EeccccccCHHHHHHHHHHhhh--c-CCceEEEEeCCchHHHH-----------h------ccCCcEEEEeccCHHHHHH
Confidence 9999999999999999999964 2 56665 88887643221 1 4567899999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
+|+.| |++|+|+..|+||++++||||||+|||+++.|+..+++.++.+|+++++.|.++++++|.+++++++.+.+
T Consensus 263 ~~~~~----d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~ 338 (364)
T cd03814 263 AYASA----DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRR 338 (364)
T ss_pred HHHhC----CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHH
Confidence 99999 99999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 645 CRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 645 ~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
+++++++.++.|+|+.++++++++|+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 339 MAARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHhhC
Confidence 99999999989999999999998873
No 37
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9.5e-32 Score=308.59 Aligned_cols=352 Identities=21% Similarity=0.231 Sum_probs=254.9
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.... |+.||.++++.+|+++|.++| |+|+|++.........
T Consensus 1 kil~i~~~~~-----------p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~-------------------- 47 (357)
T cd03795 1 RVLHVGKFYP-----------PDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKGRD-------------------- 47 (357)
T ss_pred CeeEecCCCC-----------CCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcchh--------------------
Confidence 5888885554 679999999999999999999 9999999753221110
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
....+..+++++.... ....+.... +...+. + ...+||+||+|++............
T Consensus 48 -~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~~~~-----~-------~~~~~Dii~~~~~~~~~~~~~~~~~ 104 (357)
T cd03795 48 -EERNGHRVIRAPSLLN------VASTPFSPS----FFKQLK-----K-------LAKKADVIHLHFPNPLADLALLLLP 104 (357)
T ss_pred -hhccCceEEEeecccc------cccccccHH----HHHHHH-----h-------cCCCCCEEEEecCcchHHHHHHHhc
Confidence 0112445665543111 011111111 111110 0 1257999999987443333333333
Q ss_pred CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHH
Q 001492 327 LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVL 406 (1067)
Q Consensus 327 ~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l 406 (1067)
.++|++++.|+..... . ..+.+... .++..+..||.|+++|+...+.+...+..
T Consensus 105 ~~~~~i~~~h~~~~~~-------~--------~~~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~~~~~~--------- 158 (357)
T cd03795 105 RKKPVVVHWHSDIVKQ-------K--------LLLKLYRP--LQRRFLRRADAIVATSPNYAETSPVLRRF--------- 158 (357)
T ss_pred cCceEEEEEcChhhcc-------c--------hhhhhhhH--HHHHHHHhcCEEEeCcHHHHHHHHHhcCC---------
Confidence 6899999999742211 0 01112222 24557899999999999877654333211
Q ss_pred HHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEE
Q 001492 407 RARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILAL 486 (1067)
Q Consensus 407 ~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 486 (1067)
..++.+||||+|...+.+..... ........+.+.|+++
T Consensus 159 --------------~~~~~~i~~gi~~~~~~~~~~~~---------------------------~~~~~~~~~~~~i~~~ 197 (357)
T cd03795 159 --------------RDKVRVIPLGLDPARYPRPDALE---------------------------EAIWRRAAGRPFFLFV 197 (357)
T ss_pred --------------ccceEEecCCCChhhcCCcchhh---------------------------hHhhcCCCCCcEEEEe
Confidence 13899999999998776543100 0111223567899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 487 SRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 487 gRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
||+.+.||++.+++|+.++. ++.+ |+|+++. ...+.+.+.++++.++|.|+|+++.+++..+
T Consensus 198 G~~~~~K~~~~li~a~~~l~------~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~ 260 (357)
T cd03795 198 GRLVYYKGLDVLLEAAAALP------DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLGRLDDEEKAAL 260 (357)
T ss_pred cccccccCHHHHHHHHHhcc------CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcCCCCHHHHHHH
Confidence 99999999999999999883 4444 7888763 2345567778889999999999999999999
Q ss_pred HHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc-CCceEEeCCCCHHHHHHHHHHhhcCHHHH
Q 001492 566 YRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA-LNNGLLVDPHDQQAIADALLKLVSEKNLW 642 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~-~~~Gllv~p~d~~~la~aL~~ll~d~~~~ 642 (1067)
|+.| |++++||. .|+||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++++++.+
T Consensus 261 ~~~a----d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~ 336 (357)
T cd03795 261 LAAC----DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELR 336 (357)
T ss_pred HHhC----CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHH
Confidence 9999 99999986 59999999999999999999999999998886 89999999999999999999999999999
Q ss_pred HHHHHHHHHHH-HcCCHHHHH
Q 001492 643 VECRKNGWKNI-HLFSWPEHC 662 (1067)
Q Consensus 643 ~~~~~~~~~~~-~~fsw~~~a 662 (1067)
+++++++++.+ ++|||+.++
T Consensus 337 ~~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 337 ERLGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHHHhcchHhhC
Confidence 99999999999 599998763
No 38
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=1.2e-31 Score=305.40 Aligned_cols=331 Identities=20% Similarity=0.218 Sum_probs=233.9
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++|+.....- + +|..||+++++.+|+++|.+.| |+|++++.......
T Consensus 1 MkI~~i~~~~~~~------~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~--------------------- 50 (335)
T cd03802 1 MRIALVAPPREPV------P-PPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTA--------------------- 50 (335)
T ss_pred CeEEEEcCCcccC------C-CcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCcc---------------------
Confidence 8999999654311 1 2579999999999999999999 99999997432110
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
...+....... .... +. . . .........+.+.+.+ .+|||||+|.+..... +++
T Consensus 51 -------~~~~~~~~~~~--~~~~---~~-~-~--~~~~~~~~~~~~~~~~-------~~~Divh~~~~~~~~~---~~~ 104 (335)
T cd03802 51 -------APLVPVVPEPL--RLDA---PG-R-D--RAEAEALALAERALAA-------GDFDIVHNHSLHLPLP---FAR 104 (335)
T ss_pred -------cceeeccCCCc--cccc---ch-h-h--HhhHHHHHHHHHHHhc-------CCCCEEEecCcccchh---hhc
Confidence 00011100000 0000 00 0 0 0011111111122211 5699999998755443 566
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|+|.|+........ . .......+.++++|+...+.....
T Consensus 105 ~~~~~~v~~~h~~~~~~~~~-----------------~-------~~~~~~~~~~~~~s~~~~~~~~~~----------- 149 (335)
T cd03802 105 PLPVPVVTTLHGPPDPELLK-----------------L-------YYAARPDVPFVSISDAQRRPWPPL----------- 149 (335)
T ss_pred ccCCCEEEEecCCCCcccch-----------------H-------HHhhCcCCeEEEecHHHHhhcccc-----------
Confidence 78999999999875432100 0 123567788999988655432111
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
.++.+||||+|.+.|.+.. .+++.|++
T Consensus 150 ----------------~~~~vi~ngvd~~~~~~~~-------------------------------------~~~~~i~~ 176 (335)
T cd03802 150 ----------------PWVATVHNGIDLDDYPFRG-------------------------------------PKGDYLLF 176 (335)
T ss_pred ----------------cccEEecCCcChhhCCCCC-------------------------------------CCCCEEEE
Confidence 2899999999998876422 34568999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHHHHHHhcC-CCCcEEeCCCCCCCCHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYD-LYGQVAYPKHHKQYDVP 563 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~-l~~~V~~~g~~~~~dl~ 563 (1067)
+||+.+.||++.+++++... ++. +++|+++..+. +........ +.++|.|+|+++.+++.
T Consensus 177 ~Gr~~~~Kg~~~li~~~~~~-------~~~l~i~G~~~~~~~-----------~~~~~~~~~~~~~~v~~~G~~~~~~~~ 238 (335)
T cd03802 177 LGRISPEKGPHLAIRAARRA-------GIPLKLAGPVSDPDY-----------FYREIAPELLDGPDIEYLGEVGGAEKA 238 (335)
T ss_pred EEeeccccCHHHHHHHHHhc-------CCeEEEEeCCCCHHH-----------HHHHHHHhcccCCcEEEeCCCCHHHHH
Confidence 99999999999999998654 334 48888764322 122222222 56799999999999999
Q ss_pred HHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHH
Q 001492 564 EIYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW 642 (1067)
Q Consensus 564 ~ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~ 642 (1067)
.+|+.+ |++++||. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.+++..+
T Consensus 239 ~~~~~~----d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~--- 309 (335)
T cd03802 239 ELLGNA----RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLD--- 309 (335)
T ss_pred HHHHhC----cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccH---
Confidence 999999 99999997 59999999999999999999999999999999999999986 999999999987654
Q ss_pred HHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 643 VECRKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 643 ~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
.+++++.+ ++|||+..+++|+++|+
T Consensus 310 ---~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 310 ---RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred ---HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 23455666 69999999999999874
No 39
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=2.5e-31 Score=313.25 Aligned_cols=379 Identities=16% Similarity=0.132 Sum_probs=247.8
Q ss_pred ChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcccc
Q 001492 191 GGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKE 270 (1067)
Q Consensus 191 GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~ 270 (1067)
+|.+.++.++|++|+++| |+|+|++.....+. . +.....|+.+++++..+. ....
T Consensus 14 ~~~~~R~~~~a~~L~~~G--~~V~ii~~~~~~~~--------~------------~~~~~~~v~~~~~~~~~~--~~~~- 68 (415)
T cd03816 14 IGRSPRMQYHALSLAKHG--WKVDLVGYLETPPH--------D------------EILSNPNITIHPLPPPPQ--RLNK- 68 (415)
T ss_pred cCCCHHHHHHHHHHHhcC--ceEEEEEecCCCCC--------H------------HHhcCCCEEEEECCCCcc--cccc-
Confidence 356677799999999999 99999987421110 0 011235889988876431 0000
Q ss_pred cccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc---hhHHHHHHHhcCCCcEEEEeCCCchhhHHHHH
Q 001492 271 LLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD---AGDSAALLSGALNVPMVLTGHSLGRNKLEQLL 347 (1067)
Q Consensus 271 ~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~---a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~ 347 (1067)
.+.+..+...++.....+.+.+.. ..+||+||+|... +...+.++++..++|+|++.|+.+....
T Consensus 69 --~~~~~~~~~~~~~~~~~~~~~l~~------~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~---- 136 (415)
T cd03816 69 --LPFLLFAPLKVLWQFFSLLWLLYK------LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTIL---- 136 (415)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHh------cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHH----
Confidence 111111111122222222222211 1469999998742 2344555677779999999998753221
Q ss_pred hhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEe
Q 001492 348 KQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVI 427 (1067)
Q Consensus 348 ~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vI 427 (1067)
..+.... ....++.+++ |+..++.||.|||+|+...+.+.+ +. .+..++.||
T Consensus 137 ~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~~----------------------~~~~ki~vI 188 (415)
T cd03816 137 ALKLGEN---HPLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-FN----------------------NWKIRATVL 188 (415)
T ss_pred hcccCCC---CHHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-hh----------------------ccCCCeeec
Confidence 1111011 1122344444 777899999999999988776643 21 223499999
Q ss_pred CCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhccc
Q 001492 428 PPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRP 507 (1067)
Q Consensus 428 PnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~ 507 (1067)
|||. ...|.+.... ........+.. + ... ... ... ......++..+++++||+.+.||++.+++|+..+++
T Consensus 189 ~Ng~-~~~f~p~~~~-~~~~~~~~~~~--~-~~~-~~~--~~~-~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~ 259 (415)
T cd03816 189 YDRP-PEQFRPLPLE-EKHELFLKLAK--T-FLT-REL--RIG-AVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEK 259 (415)
T ss_pred CCCC-HHHceeCcHH-HHHHHHHhccc--c-ccc-ccc--ccc-cceecCCCceEEEEeccccCCCCHHHHHHHHHHHHH
Confidence 9994 4556554310 00000000000 0 000 000 000 000112344678899999999999999999999853
Q ss_pred c----cCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC--
Q 001492 508 L----RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPA-- 580 (1067)
Q Consensus 508 l----~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps-- 580 (1067)
. ...|++.+ |+|+|+. ..++.++++++++.+.+.+.|+++.++++.+|+.| |++|.|+
T Consensus 260 ~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~a----Dv~v~~~~~ 324 (415)
T cd03816 260 SAATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASA----DLGVSLHTS 324 (415)
T ss_pred hhcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhC----CEEEEcccc
Confidence 1 12466776 8898875 35567788889987766677899999999999999 9998753
Q ss_pred -CCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHcC
Q 001492 581 -LVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSE---KNLWVECRKNGWKNIHLF 656 (1067)
Q Consensus 581 -~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d---~~~~~~~~~~~~~~~~~f 656 (1067)
..|+||++++||||||+|||+|+.||..|+++++.+|++++ |+++++++|.++++| ++.+++|++++++.. .+
T Consensus 325 ~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~ 401 (415)
T cd03816 325 SSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-EL 401 (415)
T ss_pred ccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hc
Confidence 34789999999999999999999999999999999999994 899999999999999 999999999999887 45
Q ss_pred CHHHH
Q 001492 657 SWPEH 661 (1067)
Q Consensus 657 sw~~~ 661 (1067)
+|..-
T Consensus 402 ~~~~~ 406 (415)
T cd03816 402 RWDEN 406 (415)
T ss_pred CHHHH
Confidence 55443
No 40
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=2.3e-31 Score=304.59 Aligned_cols=285 Identities=24% Similarity=0.273 Sum_probs=220.1
Q ss_pred CCceEEEEcCC--chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEE
Q 001492 304 VWPYVIHGHYA--DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVI 381 (1067)
Q Consensus 304 ~~pDvIh~h~~--~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi 381 (1067)
.+||+||+|.. .....+..+++..++|+|++.|+....... ... ...+.......++..+..++.++
T Consensus 86 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~i~ 154 (375)
T cd03821 86 READIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWAL---PHK--------ALKKRLAWFLFERRLLQAAAAVH 154 (375)
T ss_pred CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccc---ccc--------hhhhHHHHHHHHHHHHhcCCEEE
Confidence 46999999974 345555666777899999999987443210 000 01111222233566788999999
Q ss_pred eCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 382 TSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 382 ~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+++..........+ +..++.+||||+|...+.+.....
T Consensus 155 ~~s~~~~~~~~~~~------------------------~~~~~~vi~~~~~~~~~~~~~~~~------------------ 192 (375)
T cd03821 155 ATSEQEAAEIRRLG------------------------LKAPIAVIPNGVDIPPFAALPSRG------------------ 192 (375)
T ss_pred ECCHHHHHHHHhhC------------------------CcccEEEcCCCcChhccCcchhhh------------------
Confidence 99976665543322 123899999999998886543100
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
.+..+....++++|+++||+.+.||++.+++|+..+.+ ..+++.+ ++|.++.. +...+..
T Consensus 193 --------~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~--~~~~~~l~i~G~~~~~---------~~~~~~~ 253 (375)
T cd03821 193 --------RRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAE--RFPDWHLVIAGPDEGG---------YRAELKQ 253 (375)
T ss_pred --------hhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhh--hcCCeEEEEECCCCcc---------hHHHHHH
Confidence 01222334678899999999999999999999999853 3566665 78876432 2234445
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEe
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV 620 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 620 (1067)
++.++++.++|.|+|+++.+++..+|+.| |++|+||..|+||++++||||||+|||+++.||..+++.+ .+|+++
T Consensus 254 ~~~~~~~~~~v~~~g~~~~~~~~~~~~~a----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~ 328 (375)
T cd03821 254 IAAALGLEDRVTFTGMLYGEDKAAALADA----DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV 328 (375)
T ss_pred HHHhcCccceEEEcCCCChHHHHHHHhhC----CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe
Confidence 56888999999999999999999999999 9999999999999999999999999999999999999988 788888
Q ss_pred CCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Q 001492 621 DPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYL 666 (1067)
Q Consensus 621 ~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l 666 (1067)
++ +.++++++|.+++++++.+..+++++++.+ ++|||+..+++|+
T Consensus 329 ~~-~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 329 DD-DVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred CC-ChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 65 569999999999999999999999999996 6999999999886
No 41
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=3.2e-31 Score=304.75 Aligned_cols=385 Identities=22% Similarity=0.288 Sum_probs=271.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.+.. |..||.+.++..++++|+++| |+|++++.....+....... ..
T Consensus 1 kIl~i~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~--------------~~ 53 (394)
T cd03794 1 KILILSQYFP-----------PELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKG--------------YK 53 (394)
T ss_pred CEEEEecccC-----------CccCCcceeHHHHHHHHHhCC--ceEEEEecCCCccccccccc--------------ce
Confidence 5889985553 556899999999999999999 99999997543222110000 00
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC--chhHHHHHHH
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA--DAGDSAALLS 324 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~--~a~~~a~~l~ 324 (1067)
....+++.+++++..... ....+..+..+ ..........+.. +..+||+||+|.+ .....+..++
T Consensus 54 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~~ 120 (394)
T cd03794 54 REEVDGVRVHRVPLPPYK----KNGLLKRLLNY----LSFALSALLALLK-----RRRRPDVIIATSPPLLIALAALLLA 120 (394)
T ss_pred EEecCCeEEEEEecCCCC----ccchHHHHHhh----hHHHHHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHHH
Confidence 112357888887754331 11110101011 1111111111110 1256999999973 3455566667
Q ss_pred hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHH
Q 001492 325 GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEK 404 (1067)
Q Consensus 325 ~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~ 404 (1067)
+..++|+|+++|++++...... +..... ...+++.+++ ++..++.+|.|+++|+...+.+. .+
T Consensus 121 ~~~~~~~i~~~h~~~~~~~~~~---~~~~~~--~~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~-~~--------- 183 (394)
T cd03794 121 RLKGAPFVLEVRDLWPESAVAL---GLLKNG--SLLYRLLRKL--ERLIYRRADAIVVISPGMREYLV-RR--------- 183 (394)
T ss_pred HhcCCCEEEEehhhcchhHHHc---cCcccc--chHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHH-hc---------
Confidence 7779999999999866543222 111111 0112333333 67789999999999998877653 11
Q ss_pred HHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEE
Q 001492 405 VLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMIL 484 (1067)
Q Consensus 405 ~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 484 (1067)
+.+..++.++|||+|...+.+...... ........+++.|+
T Consensus 184 -------------~~~~~~~~~i~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~i~ 224 (394)
T cd03794 184 -------------GVPPEKISVIPNGVDLELFKPPPADES--------------------------LRKELGLDDKFVVL 224 (394)
T ss_pred -------------CCCcCceEEcCCCCCHHHcCCccchhh--------------------------hhhccCCCCcEEEE
Confidence 112248999999999887765431000 11122345678899
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHH
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVP 563 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~ 563 (1067)
++|++.+.||++.+++|+..+.+ . +++.+ ++|+++..+ .+...+...++ ++|.|.|+++.+++.
T Consensus 225 ~~G~~~~~k~~~~l~~~~~~l~~--~-~~~~l~i~G~~~~~~-----------~~~~~~~~~~~-~~v~~~g~~~~~~~~ 289 (394)
T cd03794 225 YAGNIGRAQGLDTLLEAAALLKD--R-PDIRFLIVGDGPEKE-----------ELKELAKALGL-DNVTFLGRVPKEELP 289 (394)
T ss_pred EecCcccccCHHHHHHHHHHHhh--c-CCeEEEEeCCcccHH-----------HHHHHHHHcCC-CcEEEeCCCChHHHH
Confidence 99999999999999999999954 2 56665 788876532 33344444454 579999999999999
Q ss_pred HHHHHhhcCCcEEEecCCCCCC-----CHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcC
Q 001492 564 EIYRLAAKTKGVFINPALVEPF-----GLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSE 638 (1067)
Q Consensus 564 ~ly~~A~~~~dV~v~ps~~Egf-----gltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d 638 (1067)
++|+.| |++++|+..|++ |++++|||+||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++++
T Consensus 290 ~~~~~~----di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~ 365 (394)
T cd03794 290 ELLAAA----DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD 365 (394)
T ss_pred HHHHhh----CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC
Confidence 999999 999999998876 78899999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Q 001492 639 KNLWVECRKNGWKNIH-LFSWPEHCRTYL 666 (1067)
Q Consensus 639 ~~~~~~~~~~~~~~~~-~fsw~~~a~~~l 666 (1067)
++.++++++++++.+. +|||+.++++|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 366 PEERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred hHHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 9999999999999995 999999998873
No 42
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-32 Score=294.72 Aligned_cols=367 Identities=17% Similarity=0.206 Sum_probs=266.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
++|+|||.|++ |.+||++.++..|++.|-++| |.|.++|..+.+- .++.
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~lg--hkVvvithayg~r-------~gir----------- 49 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRLG--HKVVVITHAYGNR-------VGIR----------- 49 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhcC--CeEEEEeccccCc-------ccee-----------
Confidence 47999999998 889999999999999999999 9999999865321 1222
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCch--hHHHHHH
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA--GDSAALL 323 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a--~~~a~~l 323 (1067)
..++|..++.+|+... -.+..+|.+.... .+++.+.. . .+..|||+|.+.+ +.-+.+.
T Consensus 50 --ylt~glkVyylp~~v~----~n~tT~ptv~~~~-Pllr~i~l-----r--------E~I~ivhghs~fS~lahe~l~h 109 (426)
T KOG1111|consen 50 --YLTNGLKVYYLPAVVG----YNQTTFPTVFSDF-PLLRPILL-----R--------ERIEIVHGHSPFSYLAHEALMH 109 (426)
T ss_pred --eecCCceEEEEeeeee----ecccchhhhhccC-cccchhhh-----h--------hceEEEecCChHHHHHHHHHHH
Confidence 2246788888886322 1122222221111 11111111 1 3589999999743 4446677
Q ss_pred HhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHH
Q 001492 324 SGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLE 403 (1067)
Q Consensus 324 ~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 403 (1067)
++.+|..+|+|-|+++--. .+.....+ + .-+..+...|++||+|..-.+.. -+.....|
T Consensus 110 artMGlktVfTdHSlfGfa--------d~~si~~n------~---ll~~sL~~id~~IcVshtskent-vlr~~L~p--- 168 (426)
T KOG1111|consen 110 ARTMGLKTVFTDHSLFGFA--------DIGSILTN------K---LLPLSLANIDRIICVSHTSKENT-VLRGALAP--- 168 (426)
T ss_pred HHhcCceEEEecccccccc--------chhhhhhc------c---eeeeeecCCCcEEEEeecCCCce-EEEeccCH---
Confidence 8889999999999974311 00100000 1 13567889999999887433321 11122222
Q ss_pred HHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEE
Q 001492 404 KVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMI 483 (1067)
Q Consensus 404 ~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 483 (1067)
.++.+|||.++.+.|.|.+.. ....+...|
T Consensus 169 ------------------~kvsvIPnAv~~~~f~P~~~~--------------------------------~~S~~i~~i 198 (426)
T KOG1111|consen 169 ------------------AKVSVIPNAVVTHTFTPDAAD--------------------------------KPSADIITI 198 (426)
T ss_pred ------------------hHeeeccceeeccccccCccc--------------------------------cCCCCeeEE
Confidence 399999999999999985510 012344789
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCH
Q 001492 484 LALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDV 562 (1067)
Q Consensus 484 l~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl 562 (1067)
+.++||.++||++.+++++.++. ..+|++.+ |+|+||... .+++..+++.++++|.++|.++.+++
T Consensus 199 vv~sRLvyrKGiDll~~iIp~vc--~~~p~vrfii~GDGPk~i-----------~lee~lEk~~l~~rV~~lG~v~h~~V 265 (426)
T KOG1111|consen 199 VVASRLVYRKGIDLLLEIIPSVC--DKHPEVRFIIIGDGPKRI-----------DLEEMLEKLFLQDRVVMLGTVPHDRV 265 (426)
T ss_pred EEEeeeeeccchHHHHHHHHHHH--hcCCCeeEEEecCCcccc-----------hHHHHHHHhhccCceEEecccchHHH
Confidence 99999999999999999999984 67899887 889998643 34567788899999999999999999
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHH
Q 001492 563 PEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLW 642 (1067)
Q Consensus 563 ~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~ 642 (1067)
.+.|..- |||++||+.|.||++++|||+||+|||+|.+||.+|++.+. -++....+++++++++++++..-..-
T Consensus 266 r~vl~~G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~ 339 (426)
T KOG1111|consen 266 RDVLVRG----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL 339 (426)
T ss_pred HHHHhcC----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC
Confidence 9999999 99999999999999999999999999999999999998753 23344557889999988888732111
Q ss_pred HHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhHhcC
Q 001492 643 VECRKNGWKNI-HLFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 643 ~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~~~ 676 (1067)
-....+.+ +.|+|+..+++.++.|.++....
T Consensus 340 ---p~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 340 ---PLEFHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred ---chhHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 12223445 48999999999999999887653
No 43
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=1.7e-31 Score=309.03 Aligned_cols=347 Identities=16% Similarity=0.180 Sum_probs=244.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcC--CCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARM--PGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDD 243 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~--G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~ 243 (1067)
|||++++.. + +..||+++++.+|+++|.+. | |+|.++++...... . .+
T Consensus 1 mkI~~~~~~-~-----------~~~GG~e~~~~~l~~~L~~~~~g--~~v~v~~~~~~~~~-~--------~~------- 50 (359)
T PRK09922 1 MKIAFIGEA-V-----------SGFGGMETVISNVINTFEESKIN--CEMFFFCRNDKMDK-A--------WL------- 50 (359)
T ss_pred CeeEEeccc-c-----------cCCCchhHHHHHHHHHhhhcCcc--eeEEEEecCCCCCh-H--------HH-------
Confidence 899999742 2 45799999999999999999 7 99999987432100 0 00
Q ss_pred CccccccCCeEE-EeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHH
Q 001492 244 GIEVGESSGAYI-IRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAAL 322 (1067)
Q Consensus 244 ~~~~~~~~gv~i-~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~ 322 (1067)
....+ ..++..+. .++.. + .++.++.+.+.+ .+||+||+|...+...+..
T Consensus 51 -------~~~~~~~~~~~~~~-~~~~~----~----------~~~~~l~~~l~~-------~~~Dii~~~~~~~~~~~~~ 101 (359)
T PRK09922 51 -------KEIKYAQSFSNIKL-SFLRR----A----------KHVYNFSKWLKE-------TQPDIVICIDVISCLYANK 101 (359)
T ss_pred -------Hhcchhcccccchh-hhhcc----c----------HHHHHHHHHHHh-------cCCCEEEEcCHHHHHHHHH
Confidence 00100 00110000 00000 0 011112222222 5799999998766666666
Q ss_pred HHhcCCCc--EEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCch
Q 001492 323 LSGALNVP--MVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDV 400 (1067)
Q Consensus 323 l~~~~giP--~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~ 400 (1067)
+++..++| ++.+.|....... .+. .. .+..+|.++++|+...+.+... +..+
T Consensus 102 ~~~~~~~~~~~~~~~h~~~~~~~----------------~~~-~~-------~~~~~d~~i~~S~~~~~~~~~~--~~~~ 155 (359)
T PRK09922 102 ARKKSGKQFKIFSWPHFSLDHKK----------------HAE-CK-------KITCADYHLAISSGIKEQMMAR--GISA 155 (359)
T ss_pred HHHHhCCCCeEEEEecCcccccc----------------hhh-hh-------hhhcCCEEEEcCHHHHHHHHHc--CCCH
Confidence 66666655 5666775321110 000 01 1378999999999877765432 1122
Q ss_pred HHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCC
Q 001492 401 KLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHK 480 (1067)
Q Consensus 401 ~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1067)
.++.+||||+|.+.+..... ...++
T Consensus 156 ---------------------~ki~vi~N~id~~~~~~~~~----------------------------------~~~~~ 180 (359)
T PRK09922 156 ---------------------QRISVIYNPVEIKTIIIPPP----------------------------------ERDKP 180 (359)
T ss_pred ---------------------HHEEEEcCCCCHHHccCCCc----------------------------------ccCCC
Confidence 38999999999765432110 01346
Q ss_pred cEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCC
Q 001492 481 PMILALSRPD--PKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHH 557 (1067)
Q Consensus 481 ~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 557 (1067)
+.|+++||+. +.||+..+++|+..+. . ++.+ ++|++++. ..+.++++++++.++|.|+|++
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~--~~~l~ivG~g~~~-----------~~l~~~~~~~~l~~~v~f~G~~ 244 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTT---G--EWQLHIIGDGSDF-----------EKCKAYSRELGIEQRIIWHGWQ 244 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhC---C--CeEEEEEeCCccH-----------HHHHHHHHHcCCCCeEEEeccc
Confidence 7899999986 4699999999999873 2 4554 88988753 4567788889999999999987
Q ss_pred CC--CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC-CCCchhhhccCCceEEeCCCCHHHHHHHHHH
Q 001492 558 KQ--YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK-NGGPVDIHRALNNGLLVDPHDQQAIADALLK 634 (1067)
Q Consensus 558 ~~--~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~-~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ 634 (1067)
+. ++++.+|+.| |++|+||.+||||++++||||||+|||+++ .||+.|++.++.+|++++|+|+++++++|.+
T Consensus 245 ~~~~~~~~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~ 320 (359)
T PRK09922 245 SQPWEVVQQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNK 320 (359)
T ss_pred CCcHHHHHHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHH
Confidence 54 6789999999 999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Q 001492 635 LVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 635 ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
++++++.+ ......+.+.+|+-+..++++...|..++.
T Consensus 321 l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 321 VISGEVKY--QHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred HHhCcccC--CHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999755 223333445788999999999999987754
No 44
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=7.2e-31 Score=300.76 Aligned_cols=371 Identities=23% Similarity=0.322 Sum_probs=264.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++++.... |..||.+.++..++++|++.| |+|++++...........
T Consensus 1 kil~~~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~~------------------ 49 (374)
T cd03817 1 KIGIFTDTYL-----------PQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPEEEE------------------ 49 (374)
T ss_pred CeeEeehhcc-----------CCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCcccc------------------
Confidence 5888875443 789999999999999999999 999999975432111000
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC-chhHHHHHHHh
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA-DAGDSAALLSG 325 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~-~a~~~a~~l~~ 325 (1067)
..+....+.+... +......+. +...+. ..+. ..+||+||+|.. ..+..+..+++
T Consensus 50 ---~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~-------~~~~-------~~~~Div~~~~~~~~~~~~~~~~~ 105 (374)
T cd03817 50 ---VVVVRPFRVPTFK---YPDFRLPLP----IPRALI-------IILK-------ELGPDIVHTHTPFSLGLLGLRVAR 105 (374)
T ss_pred ---cccccccccccch---hhhhhcccc----HHHHHH-------HHHh-------hcCCCEEEECCchhhhhHHHHHHH
Confidence 0011111110000 000000111 111111 1111 156999999986 34566677788
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|++.|+.+....... ..+.... .....+ ..++..+..||.+++.|+...+.+...
T Consensus 106 ~~~~~~i~~~~~~~~~~~~~~-~~~~~~~------~~~~~~-~~~~~~~~~~d~i~~~s~~~~~~~~~~----------- 166 (374)
T cd03817 106 KLGIPVVATYHTMYEDYTHYV-PLGRLLA------RAVVRR-KLSRRFYNRCDAVIAPSEKIADLLREY----------- 166 (374)
T ss_pred HcCCCEEEEecCCHHHHHHHH-hcccchh------HHHHHH-HHHHHHhhhCCEEEeccHHHHHHHHhc-----------
Confidence 889999999999866443222 1111100 011110 246677999999999999866554332
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
|.. .++.++|||+|...+.+.... ..+..+...++++.|++
T Consensus 167 -------~~~------~~~~vi~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 167 -------GVK------RPIEVIPTGIDLDRFEPVDGD--------------------------DERRKLGIPEDEPVLLY 207 (374)
T ss_pred -------CCC------CceEEcCCccchhccCccchh--------------------------HHHHhcCCCCCCeEEEE
Confidence 111 268999999999887654310 00122233456788999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+|++.+.||++.+++++..+.. ..+++.+ ++|+++. ...+..+++++++.++|.|+|+++.+++..
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 274 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLK--EEPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVPREELPD 274 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHH--hCCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCChHHHHH
Confidence 9999999999999999999853 3466776 7787653 345667777888889999999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
+|+.| |++++|+..|+||++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.+++
T Consensus 275 ~~~~a----d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~ 349 (374)
T cd03817 275 YYKAA----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRR 349 (374)
T ss_pred HHHHc----CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHH
Confidence 99999 9999999999999999999999999999999999999999999999998887 999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 645 CRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 645 ~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
+++++++.+++|+ +++.+.++|++
T Consensus 350 ~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 350 LSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 9999999997666 55666666553
No 45
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=9.2e-31 Score=304.98 Aligned_cols=379 Identities=16% Similarity=0.113 Sum_probs=244.8
Q ss_pred CceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCC
Q 001492 164 KKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDD 243 (1067)
Q Consensus 164 ~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~ 243 (1067)
++|||++++.-++ |..+|+.+.+..++..|+++|. |+|+|+++.....+-...|+.....-.+. +.
T Consensus 3 ~~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~--~~ 68 (462)
T PLN02846 3 KKQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPS--EQ 68 (462)
T ss_pred CCCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCch--hh
Confidence 5699999997776 8899999999999999999992 39999998543211011122000000000 00
Q ss_pred CccccccCCeEEEeccCCCCccCcc-----cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-hh
Q 001492 244 GIEVGESSGAYIIRIPFGPRDKYLR-----KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-AG 317 (1067)
Q Consensus 244 ~~~~~~~~gv~i~ri~~~~~~~~l~-----k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a~ 317 (1067)
...+.+..+.+++++|.-+...|-. ...++|. ..+.+.+ .+ .+|||||+|.+. .+
T Consensus 69 e~~~~~~~~~~v~r~~s~~~p~yp~r~~~~~r~~~~~-----~~i~~~l-------~~-------~~pDVIHv~tP~~LG 129 (462)
T PLN02846 69 EAYVRQWLEERISFLPKFSIKFYPGKFSTDKRSILPV-----GDISETI-------PD-------EEADIAVLEEPEHLT 129 (462)
T ss_pred hhhhhhhccCeEEEecccccccCcccccccccccCCh-----HHHHHHH-------Hh-------cCCCEEEEcCchhhh
Confidence 0001111233555655433211111 1111111 1122222 22 579999999984 45
Q ss_pred HH--HHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhc
Q 001492 318 DS--AALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLY 395 (1067)
Q Consensus 318 ~~--a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y 395 (1067)
+. +..+++++++ +|.|.|.-+..+.+.. ..|.....-.....+++++ ..+|.|+++|... +++.+
T Consensus 130 ~~~~g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~~~l~~~~~~~~~r--------~~~d~vi~pS~~~-~~l~~-- 196 (462)
T PLN02846 130 WYHHGKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVKAFLLKYINSWVVD--------IYCHKVIRLSAAT-QDYPR-- 196 (462)
T ss_pred hHHHHHHHHhcCCc-EEEEECCChHHHHHHh-ccchHHHHHHHHHHHHHHH--------HhcCEEEccCHHH-HHHhh--
Confidence 54 6666766755 8889999654443221 1111111001111122222 2389999999743 32210
Q ss_pred CCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhc
Q 001492 396 DGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFL 475 (1067)
Q Consensus 396 ~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1067)
.+.+.++|||.+.|.+.... .+. ..
T Consensus 197 ---------------------------~~i~~v~GVd~~~f~~~~~~------~~~----------------------~~ 221 (462)
T PLN02846 197 ---------------------------SIICNVHGVNPKFLEIGKLK------LEQ----------------------QK 221 (462)
T ss_pred ---------------------------CEEecCceechhhcCCCccc------Hhh----------------------hc
Confidence 34455799999988765410 000 00
Q ss_pred cCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 476 TNPH--KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 476 ~~~~--~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
...+ .+.++|+||+.+.||++.||+|+..+. ...+++.| |+|+|++. .++++++.++++..++
T Consensus 222 ~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~--~~~~~~~l~ivGdGp~~-----------~~L~~~a~~l~l~~~v- 287 (462)
T PLN02846 222 NGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQ--KELSGLEVDLYGSGEDS-----------DEVKAAAEKLELDVRV- 287 (462)
T ss_pred CCCCCcceEEEEEecCcccCCHHHHHHHHHHHH--hhCCCeEEEEECCCccH-----------HHHHHHHHhcCCcEEE-
Confidence 1122 357999999999999999999999884 34466765 99999874 4456788888876444
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHH
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADAL 632 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL 632 (1067)
|.|. .+..++|+.+ ||||+||.+|+||++++||||||+|||+++.++ .+++.++.+|++++ |.++++++|
T Consensus 288 f~G~---~~~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai 357 (462)
T PLN02846 288 YPGR---DHADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRAT 357 (462)
T ss_pred ECCC---CCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHH
Confidence 7775 3455899999 999999999999999999999999999999998 59999999999994 899999999
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 001492 633 LKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 633 ~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 672 (1067)
.++++++. ..++..+ .+.|||+..+++|++.|+-.
T Consensus 358 ~~~l~~~~--~~~~~~a---~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 358 LKALAEEP--APLTDAQ---RHELSWEAATERFLRVADLD 392 (462)
T ss_pred HHHHccCc--hhHHHHH---HHhCCHHHHHHHHHHHhccC
Confidence 99998542 2223322 24899999999999999743
No 46
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=2.4e-31 Score=305.08 Aligned_cols=362 Identities=25% Similarity=0.322 Sum_probs=256.7
Q ss_pred EEEEEecccccccCCcCCCCCC-CCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 167 YIVLISLHGLVRGENMELGRDS-DTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~-~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
||++++.+.. | ..||+++|+.+|+++|++.| |.|++++.............
T Consensus 1 ~ili~~~~~~-----------~~~~gG~~~~~~~l~~~L~~~~--~~v~~~~~~~~~~~~~~~~~--------------- 52 (365)
T cd03809 1 RILIDARFLA-----------SRRPTGIGRYARELLRALLKLD--PEEVLLLLPGAPGLLLLPLR--------------- 52 (365)
T ss_pred CEEEechhhh-----------cCCCCcHHHHHHHHHHHHHhcC--CceEEEEecCccccccccch---------------
Confidence 4777764443 4 68999999999999999999 99999988543221110000
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
..... ... ......+.....+......... ..+||+||+++...... +
T Consensus 53 -----~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~--------------~~~~Dii~~~~~~~~~~-----~ 100 (365)
T cd03809 53 -----AALRL--LLR------LPRRLLWGLLFLLRAGDRLLLL--------------LLGLDLLHSPHNTAPLL-----R 100 (365)
T ss_pred -----hcccc--ccc------cccccccchhhHHHHHHHHHhh--------------hcCCCeeeecccccCcc-----c
Confidence 00000 000 0111111111111111111111 14699999998754333 6
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|+++|++.+....... .. ......+. .++..+..+|.+++.|+...+.+.+.+.. .+
T Consensus 101 ~~~~~~i~~~hd~~~~~~~~~~-----~~----~~~~~~~~--~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-~~----- 163 (365)
T cd03809 101 LRGVPVVVTIHDLIPLRFPEYF-----SP----GFRRYFRR--LLRRALRRADAIITVSEATKRDLLRYLGV-PP----- 163 (365)
T ss_pred CCCCCEEEEeccchhhhCcccC-----CH----HHHHHHHH--HHHHHHHHcCEEEEccHHHHHHHHHHhCc-CH-----
Confidence 6799999999998654422111 10 01112222 25667899999999999888877665542 12
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
.++.++|||+|...+.+.... . .......++++.|++
T Consensus 164 ----------------~~~~vi~~~~~~~~~~~~~~~-----------------------~----~~~~~~~~~~~~i~~ 200 (365)
T cd03809 164 ----------------DKIVVIPLGVDPRFRPPPAEA-----------------------E----VLRALYLLPRPYFLY 200 (365)
T ss_pred ----------------HHEEeeccccCccccCCCchH-----------------------H----HHHHhcCCCCCeEEE
Confidence 289999999999877654310 0 111223456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+||+.+.||++.+++++..+.. ..+++.+ ++|.+..... .....+...++.++|.|+|+++.+++..
T Consensus 201 ~G~~~~~K~~~~~l~~~~~~~~--~~~~~~l~i~G~~~~~~~----------~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (365)
T cd03809 201 VGTIEPRKNLERLLEAFARLPA--KGPDPKLVIVGKRGWLNE----------ELLARLRELGLGDRVRFLGYVSDEELAA 268 (365)
T ss_pred eCCCccccCHHHHHHHHHHHHH--hcCCCCEEEecCCccccH----------HHHHHHHHcCCCCeEEECCCCChhHHHH
Confidence 9999999999999999999964 3334444 7776543211 1222335678889999999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
+|+.| |++++||..|+||++++|||++|+|||+++.|+..|++. .+|+++++.|.++++++|.+++++++.+.+
T Consensus 269 ~~~~~----d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 342 (365)
T cd03809 269 LYRGA----RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLLEDPALREE 342 (365)
T ss_pred HHhhh----hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHhcCHHHHHH
Confidence 99999 999999999999999999999999999999999999985 579999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHH
Q 001492 645 CRKNGWKNIHLFSWPEHCRTYL 666 (1067)
Q Consensus 645 ~~~~~~~~~~~fsw~~~a~~~l 666 (1067)
+++++++.++.|+|+.++++|+
T Consensus 343 ~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 343 LRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHHHHhCCHHHHHHHHh
Confidence 9999998788999999999886
No 47
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=7.9e-31 Score=300.69 Aligned_cols=268 Identities=24% Similarity=0.304 Sum_probs=218.2
Q ss_pred CCceEEEEcCCc-hhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYAD-AGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~~-a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+||+|+.. ....+.+.++..++|++++.|+...... . . . ..++..++.+|.+++
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~------~-------~~~~~~~~~~~~vi~ 136 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-------P-D------A-------IDLDEKLARADFVVA 136 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-------C-c------h-------HHHHHHHhhCCEEEE
Confidence 469999999874 4445555555568999999996522110 0 0 0 123445789999999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
+|+...+.+...+. . +..++.+||||+|.+.|.+...
T Consensus 137 ~s~~~~~~l~~~~~-~---------------------~~~~~~vi~~~~d~~~~~~~~~--------------------- 173 (355)
T cd03799 137 ISEYNRQQLIRLLG-C---------------------DPDKIHVVHCGVDLERFPPRPP--------------------- 173 (355)
T ss_pred CCHHHHHHHHHhcC-C---------------------CcccEEEEeCCcCHHHcCCccc---------------------
Confidence 99988887755431 1 2238999999999887754320
Q ss_pred CcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKL 541 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l 541 (1067)
....+++.|+++||+.+.||++.+++++..+.. ..+++.+ ++|+++.. ..+...
T Consensus 174 ------------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~~-----------~~~~~~ 228 (355)
T cd03799 174 ------------PPPGEPLRILSVGRLVEKKGLDYLLEALALLKD--RGIDFRLDIVGDGPLR-----------DELEAL 228 (355)
T ss_pred ------------cccCCCeEEEEEeeeccccCHHHHHHHHHHHhh--cCCCeEEEEEECCccH-----------HHHHHH
Confidence 012456789999999999999999999999853 3567776 88887643 445667
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC------CCCCHHHHHHHHcCCCEEEcCCCCchhhhccCC
Q 001492 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALV------EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALN 615 (1067)
Q Consensus 542 ~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~------EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~ 615 (1067)
+.++++.++|.|.|+++.+++..+|+.| |++++|+.. |+||++++||||||+|||+++.|+..+++.++.
T Consensus 229 ~~~~~~~~~v~~~g~~~~~~l~~~~~~a----di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~ 304 (355)
T cd03799 229 IAELGLEDRVTLLGAKSQEEVRELLRAA----DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGE 304 (355)
T ss_pred HHHcCCCCeEEECCcCChHHHHHHHHhC----CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCC
Confidence 7788888999999999999999999999 999999998 999999999999999999999999999999988
Q ss_pred ceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHH
Q 001492 616 NGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRT 664 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~ 664 (1067)
+|+++++.|+++++++|.+++++++.+.++++++++.+ .+|||+..+++
T Consensus 305 ~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 305 TGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred ceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 99999999999999999999999999999999999998 59999998865
No 48
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=1.1e-30 Score=299.56 Aligned_cols=356 Identities=22% Similarity=0.227 Sum_probs=250.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.+. |..||.++++.+|+++|++.| |+|++++.....+... ..
T Consensus 1 kI~~v~~~~------------~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~--~~---------------- 48 (366)
T cd03822 1 RIALVSPYP------------PRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPSLL--YG---------------- 48 (366)
T ss_pred CeEEecCCC------------CCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCccc--CC----------------
Confidence 588887432 558999999999999999999 9999998743221110 00
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc------hhHHH
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD------AGDSA 320 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~------a~~~a 320 (1067)
.......... . ... .....+...+.. .+||+||++.+. .....
T Consensus 49 -~~~~~~~~~~-~----------~~~-----~~~~~~~~~~~~--------------~~~dii~~~~~~~~~~~~~~~~~ 97 (366)
T cd03822 49 -GEQEVVRVIV-L----------DNP-----LDYRRAARAIRL--------------SGPDVVVIQHEYGIFGGEAGLYL 97 (366)
T ss_pred -Ccccceeeee-c----------CCc-----hhHHHHHHHHhh--------------cCCCEEEEeeccccccchhhHHH
Confidence 0000111110 0 000 000111111111 469999998731 12222
Q ss_pred HHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCch
Q 001492 321 ALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDV 400 (1067)
Q Consensus 321 ~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~ 400 (1067)
..+.+..++|+|+++|+..... .. . .... .++..++.+|.|+|+|.....++.....
T Consensus 98 ~~~~~~~~~~~i~~~h~~~~~~-------~~-------~---~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~---- 154 (366)
T cd03822 98 LLLLRGLGIPVVVTLHTVLLHE-------PR-------P---GDRA--LLRLLLRRADAVIVMSSELLRALLLRAY---- 154 (366)
T ss_pred HHHHhhcCCCEEEEEecCCccc-------cc-------h---hhhH--HHHHHHhcCCEEEEeeHHHHHHHHhhcC----
Confidence 2223457999999999961110 00 0 0111 1344588999999997444444322111
Q ss_pred HHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCC
Q 001492 401 KLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHK 480 (1067)
Q Consensus 401 ~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1067)
..++.+||||+|...+.+... ........++
T Consensus 155 --------------------~~~~~~i~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~ 185 (366)
T cd03822 155 --------------------PEKIAVIPHGVPDPPAEPPES-----------------------------LKALGGLDGR 185 (366)
T ss_pred --------------------CCcEEEeCCCCcCcccCCchh-----------------------------hHhhcCCCCC
Confidence 138999999999876654320 0111234567
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC-CC
Q 001492 481 PMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH-HK 558 (1067)
Q Consensus 481 ~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~-~~ 558 (1067)
+.|+++||+.+.||++.+++|+..+.. ..+++.+ |+|++...... .......++.++++.++|.|+|. ++
T Consensus 186 ~~i~~~G~~~~~K~~~~ll~a~~~~~~--~~~~~~l~i~G~~~~~~~~------~~~~~~~~i~~~~~~~~v~~~~~~~~ 257 (366)
T cd03822 186 PVLLTFGLLRPYKGLELLLEALPLLVA--KHPDVRLLVAGETHPDLER------YRGEAYALAERLGLADRVIFINRYLP 257 (366)
T ss_pred eEEEEEeeccCCCCHHHHHHHHHHHHh--hCCCeEEEEeccCccchhh------hhhhhHhHHHhcCCCCcEEEecCcCC
Confidence 899999999999999999999999853 3566665 77876532111 01111145778899999999987 99
Q ss_pred CCCHHHHHHHhhcCCcEEEecCCCC--CCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhh
Q 001492 559 QYDVPEIYRLAAKTKGVFINPALVE--PFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 559 ~~dl~~ly~~A~~~~dV~v~ps~~E--gfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll 636 (1067)
.+++..+|+.| |++++|+..| +||++++||||||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++
T Consensus 258 ~~~~~~~~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~ 332 (366)
T cd03822 258 DEELPELFSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL 332 (366)
T ss_pred HHHHHHHHhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH
Confidence 99999999999 9999999999 99999999999999999999999 67777788999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 637 SEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 637 ~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
++++.+.++++++++.++.|||+.++++|.++|+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 333 ADPELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred cChHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 9999999999999999977999999999998873
No 49
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.7e-30 Score=307.20 Aligned_cols=408 Identities=16% Similarity=0.189 Sum_probs=270.4
Q ss_pred ccCCCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCee--EEEEEecCCCCCCCCCcCCCcccccC
Q 001492 160 DKKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVY--RVDLFSRQVSSPEVDWSYGEPAEMLT 237 (1067)
Q Consensus 160 ~~~~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~--~V~v~t~~~~~~~~~~~y~~~~e~l~ 237 (1067)
...+++++|+++.++. | ..||.++.+.+.+++|.+.| + .|.++|...+. . +.|.+.
T Consensus 28 ~~~~~~~~v~f~HP~~---------~---~ggG~ERvl~~a~~~l~~~~--~~~~v~iyt~~~d~-~-------~~~~l~ 85 (463)
T PLN02949 28 ARRSRKRAVGFFHPYT---------N---DGGGGERVLWCAVRAIQEEN--PDLDCVIYTGDHDA-S-------PDSLAA 85 (463)
T ss_pred cccCCCcEEEEECCCC---------C---CCCChhhHHHHHHHHHHhhC--CCCeEEEEcCCCCC-C-------HHHHHH
Confidence 3445678999885322 2 35699999999999999998 6 88888875321 1 112111
Q ss_pred CCCCCCCccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-h
Q 001492 238 GGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-A 316 (1067)
Q Consensus 238 ~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a 316 (1067)
........++ ...+.++++.. . .|+ ....||++.-+. ..++.+.....++.. ..|||+.-.... .
T Consensus 86 ~~~~~~~i~~--~~~~~~v~l~~--~-~~~-~~~~~~~~t~~~-~~~~~~~l~~~~~~~-------~~p~v~vDt~~~~~ 151 (463)
T PLN02949 86 RARDRFGVEL--LSPPKVVHLRK--R-KWI-EEETYPRFTMIG-QSLGSVYLAWEALCK-------FTPLYFFDTSGYAF 151 (463)
T ss_pred HHHhhcceec--CCCceEEEecc--c-ccc-ccccCCceehHH-HHHHHHHHHHHHHHh-------cCCCEEEeCCCccc
Confidence 0000111111 12234444321 1 233 334566643222 222222222222222 236654433221 1
Q ss_pred hHHHHHHHhcCCCcEEEEeCCCchhh--HHHHHhhCC--------CChh-hhhhHhHHHHhHH--HhhcccccCCEEEeC
Q 001492 317 GDSAALLSGALNVPMVLTGHSLGRNK--LEQLLKQGR--------QSKE-DINSTYKIMRRIE--GEELSLDAAELVITS 383 (1067)
Q Consensus 317 ~~~a~~l~~~~giP~V~t~H~l~~~~--~~~l~~~g~--------~~~~-~i~~~y~~~~ri~--~E~~~l~~Ad~Vi~~ 383 (1067)
++ .+.+..++|+++++|...... ... ...+. .... ......++.++.. .++.+.+.||.|+|+
T Consensus 152 ~~---pl~~~~~~~v~~yvH~p~~~~dm~~~-v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~n 227 (463)
T PLN02949 152 TY---PLARLFGCKVVCYTHYPTISSDMISR-VRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVN 227 (463)
T ss_pred HH---HHHHhcCCcEEEEEeCCcchHHHHHH-HhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 22 122345899999999642211 111 00010 0000 0011111222221 467788999999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+.+.+.. ..++.+++||+|...+.....
T Consensus 228 S~~t~~~l~~~~~~-----------------------~~~i~vvyp~vd~~~~~~~~~---------------------- 262 (463)
T PLN02949 228 SSWTKSHIEALWRI-----------------------PERIKRVYPPCDTSGLQALPL---------------------- 262 (463)
T ss_pred CHHHHHHHHHHcCC-----------------------CCCeEEEcCCCCHHHcccCCc----------------------
Confidence 99887766544321 127899999999876532110
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCcEEE-EEecCCChhhhhccchHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL--RELANLTL-IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l--~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
...+++++|+++||+.++||++.+|+||..+.+. ...+++.| |+|++.. .++.++..++.+
T Consensus 263 -----------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~-----~~~~~~~~eL~~ 326 (463)
T PLN02949 263 -----------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN-----KEDEERLQKLKD 326 (463)
T ss_pred -----------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC-----cccHHHHHHHHH
Confidence 0023457899999999999999999999987431 12356665 7887642 122446778899
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCch-hhhcc---CCc
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPV-DIHRA---LNN 616 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~-eiv~~---~~~ 616 (1067)
+++++++.++|.|+|.++.+++..+|+.| +++|+|+..|+||++++||||||+|||+++.||+. |++.+ +.+
T Consensus 327 la~~l~L~~~V~f~g~v~~~el~~ll~~a----~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~t 402 (463)
T PLN02949 327 RAKELGLDGDVEFHKNVSYRDLVRLLGGA----VAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQT 402 (463)
T ss_pred HHHHcCCCCcEEEeCCCCHHHHHHHHHhC----cEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcc
Confidence 99999999999999999999999999999 99999999999999999999999999999999985 77765 568
Q ss_pred eEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Q 001492 617 GLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
|++++ |+++++++|.++++ +++.+++|++++++.+++|||+..+++|.+.|..++.
T Consensus 403 G~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 403 GFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred cccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 99984 89999999999998 6788999999999999889999999999999998765
No 50
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=2.8e-30 Score=293.48 Aligned_cols=372 Identities=27% Similarity=0.343 Sum_probs=268.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.... |..||...++..|+++|.+.| |+|++++............
T Consensus 1 kI~ii~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~~~~----------------- 50 (374)
T cd03801 1 KILLVTPEYP-----------PSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDEEEV----------------- 50 (374)
T ss_pred CeeEEecccC-----------CccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCceeee-----------------
Confidence 5888885543 346999999999999999999 9999999854321110000
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
.......... . ...... ...... ...+.+.+.+ .+||+||+|.+........+++.
T Consensus 51 ----~~~~~~~~~~-----~-~~~~~~----~~~~~~---~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~~ 106 (374)
T cd03801 51 ----GGIVVVRPPP-----L-LRVRRL----LLLLLL---ALRLRRLLRR-------ERFDVVHAHDWLALLAAALAARL 106 (374)
T ss_pred ----cCcceecCCc-----c-cccchh----HHHHHH---HHHHHHHhhh-------cCCcEEEEechhHHHHHHHHHHh
Confidence 0000100000 0 000000 000001 1111111111 46999999998655555567778
Q ss_pred CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHH
Q 001492 327 LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVL 406 (1067)
Q Consensus 327 ~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l 406 (1067)
.++|++++.|+......... ......... ..++..+..+|.+++.|+...+.+...+..
T Consensus 107 ~~~~~i~~~h~~~~~~~~~~----------~~~~~~~~~--~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~--------- 165 (374)
T cd03801 107 LGIPLVLTVHGLEFGRPGNE----------LGLLLKLAR--ALERRALRRADRIIAVSEATREELRELGGV--------- 165 (374)
T ss_pred cCCcEEEEeccchhhccccc----------hhHHHHHHH--HHHHHHHHhCCEEEEecHHHHHHHHhcCCC---------
Confidence 89999999999755432110 000111111 235667899999999999888776555432
Q ss_pred HHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEE
Q 001492 407 RARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILAL 486 (1067)
Q Consensus 407 ~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 486 (1067)
...++.++|||+|...+.+.. .. ........++++.|+++
T Consensus 166 -------------~~~~~~~i~~~~~~~~~~~~~------~~---------------------~~~~~~~~~~~~~i~~~ 205 (374)
T cd03801 166 -------------PPEKITVIPNGVDTERFRPAP------RA---------------------ARRRLGIPEDEPVILFV 205 (374)
T ss_pred -------------CCCcEEEecCcccccccCccc------hH---------------------HHhhcCCcCCCeEEEEe
Confidence 113899999999998775421 00 00111223567889999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 487 SRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 487 gRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
|++.+.||++.+++++..+.. ..+++.+ ++|+++. ...+..++.+++..++|.|.|+++.+++..+
T Consensus 206 g~~~~~k~~~~~i~~~~~~~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 272 (374)
T cd03801 206 GRLVPRKGVDLLLEALAKLRK--EYPDVRLVIVGDGPL-----------REELEALAAELGLGDRVTFLGFVPDEDLPAL 272 (374)
T ss_pred cchhhhcCHHHHHHHHHHHhh--hcCCeEEEEEeCcHH-----------HHHHHHHHHHhCCCcceEEEeccChhhHHHH
Confidence 999999999999999999853 3467776 7786543 3455566778888899999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHH
Q 001492 566 YRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVEC 645 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~ 645 (1067)
|+.| |++++|+..|++|++++|||++|+|||+++.++..+++.++.+|+++++.|+++++++|.+++++++.+.++
T Consensus 273 ~~~~----di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 348 (374)
T cd03801 273 YAAA----DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRL 348 (374)
T ss_pred HHhc----CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHH
Confidence 9999 999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 646 RKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 646 ~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
++++++.+ +.|+|+.+++++.++|+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 349 GEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 99999777 69999999999998763
No 51
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=6e-31 Score=302.54 Aligned_cols=335 Identities=21% Similarity=0.232 Sum_probs=241.8
Q ss_pred CCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcc
Q 001492 189 DTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLR 268 (1067)
Q Consensus 189 ~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 268 (1067)
..||.++++.+++++|++.| |+|++++....... +.. .....++.+++++....
T Consensus 10 ~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~~~~----~~~---------------~~~~~~~~~~~~~~~~~----- 63 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKEEGD----YDD---------------EIEKLGGKIYYIPARKK----- 63 (358)
T ss_pred CCccHHHHHHHHHHhcCccc--eEEEEEEeCCCCcc----hHH---------------HHHHcCCeEEEecCCCc-----
Confidence 48999999999999999999 99999997432110 000 01123666666442111
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcE-EEEeCCCchhhHHHHH
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPM-VLTGHSLGRNKLEQLL 347 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~-V~t~H~l~~~~~~~l~ 347 (1067)
..+ .+...+.. .+.+ .+||+||+|......++..+.+..+.|. +++.|+......
T Consensus 64 --~~~----~~~~~~~~-------~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---- 119 (358)
T cd03812 64 --NPL----KYFKKLYK-------LIKK-------NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHD---- 119 (358)
T ss_pred --cHH----HHHHHHHH-------HHhc-------CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccc----
Confidence 111 11111111 1111 5699999999876666666666677776 678887643221
Q ss_pred hhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEe
Q 001492 348 KQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVI 427 (1067)
Q Consensus 348 ~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vI 427 (1067)
.... .... ...+...+..++.++++|+...+.+.... . ..++.+|
T Consensus 120 ---~~~~-----~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~~---~---------------------~~~~~vi 164 (358)
T cd03812 120 ---KKKK-----ILKY---KVLRKLINRLATDYLACSEEAGKWLFGKV---K---------------------NKKFKVI 164 (358)
T ss_pred ---ccch-----hhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhCC---C---------------------cccEEEE
Confidence 0000 0000 11245568889999999998777654431 1 1389999
Q ss_pred CCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhccc
Q 001492 428 PPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRP 507 (1067)
Q Consensus 428 PnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~ 507 (1067)
|||+|.+.|.+.... ...+......++++.|+++||+.+.||++.+++|+..+.
T Consensus 165 ~ngvd~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~- 218 (358)
T cd03812 165 PNGIDLEKFIFNEEI-------------------------RKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELL- 218 (358)
T ss_pred eccCcHHHcCCCchh-------------------------hhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHH-
Confidence 999999887654310 000122234567889999999999999999999999995
Q ss_pred ccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCC
Q 001492 508 LRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFG 586 (1067)
Q Consensus 508 l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfg 586 (1067)
+..+++.+ |+|+++. ...+...++++++.++|.|+|+ .+++..+|+.| |++|+||..|+||
T Consensus 219 -~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~E~~~ 280 (358)
T cd03812 219 -KKNPNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM----DVFLFPSLYEGLP 280 (358)
T ss_pred -HhCCCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc----CEEEecccccCCC
Confidence 34577776 8898874 2455677788899999999998 78999999999 9999999999999
Q ss_pred HHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 001492 587 LTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI 653 (1067)
Q Consensus 587 ltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~ 653 (1067)
++++||||+|+|||+|+.||..+++.+ ..|++..+.++++++++|.+++++|+.++.+...+....
T Consensus 281 ~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 281 LVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGL 346 (358)
T ss_pred HHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccc
Confidence 999999999999999999999999988 566777777899999999999999999888877776654
No 52
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=2.8e-30 Score=294.52 Aligned_cols=351 Identities=23% Similarity=0.274 Sum_probs=255.2
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
.||.++++..|+++|.+.| |+|.+++.....+. . ..+ ...++.++.++....
T Consensus 11 ~gG~~~~~~~l~~~l~~~~--~~v~~~~~~~~~~~-----~---~~~------------~~~~i~v~~~~~~~~------ 62 (365)
T cd03807 11 VGGAERMLVRLLKGLDRDR--FEHVVISLTDRGEL-----G---EEL------------EEAGVPVYCLGKRPG------ 62 (365)
T ss_pred CccHHHHHHHHHHHhhhcc--ceEEEEecCcchhh-----h---HHH------------HhcCCeEEEEecccc------
Confidence 4999999999999999999 99999986421110 0 000 113667766654211
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
+... .+...+.. .+.+ .+||+||+|.......+...... .++|++++.|+......
T Consensus 63 ---~~~~-~~~~~~~~-------~~~~-------~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----- 119 (365)
T cd03807 63 ---RPDP-GALLRLYK-------LIRR-------LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG----- 119 (365)
T ss_pred ---cccH-HHHHHHHH-------HHHh-------hCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc-----
Confidence 1111 11111221 1211 46999999977555555555554 68999999998754321
Q ss_pred hCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeC
Q 001492 349 QGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428 (1067)
Q Consensus 349 ~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIP 428 (1067)
+. ...+... .++.....++.+++.|+...+.+... ++.. .++.++|
T Consensus 120 -~~--------~~~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~---------------------~~~~vi~ 165 (365)
T cd03807 120 -KK--------STRLVAR--LRRLLSSFIPLIVANSAAAAEYHQAI--GYPP---------------------KKIVVIP 165 (365)
T ss_pred -ch--------hHhHHHH--HHHHhccccCeEEeccHHHHHHHHHc--CCCh---------------------hheeEeC
Confidence 00 0111111 24456788999999998777665432 2222 3889999
Q ss_pred CCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001492 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL 508 (1067)
Q Consensus 429 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l 508 (1067)
||+|...+.+... .....+..+..+++.++|+++||+.+.||++.+++|+..+.+
T Consensus 166 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~- 220 (365)
T cd03807 166 NGVDTERFSPDLD------------------------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLK- 220 (365)
T ss_pred CCcCHHhcCCccc------------------------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHH-
Confidence 9999887765431 001112233445677899999999999999999999999853
Q ss_pred cCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHH-hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCC
Q 001492 509 RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLID-KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFG 586 (1067)
Q Consensus 509 ~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~-~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfg 586 (1067)
..+++.+ ++|.++.... +..... .+++.++|.|.|. .+++..+|+.| |++++|+..|+||
T Consensus 221 -~~~~~~l~i~G~~~~~~~-----------~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~e~~~ 282 (365)
T cd03807 221 -KFPNARLLLVGDGPDRAN-----------LELLALKELGLEDKVILLGE--RSDVPALLNAL----DVFVLSSLSEGFP 282 (365)
T ss_pred -hCCCeEEEEecCCcchhH-----------HHHHHHHhcCCCceEEEccc--cccHHHHHHhC----CEEEeCCccccCC
Confidence 3567776 7787654322 223333 7788889999996 57899999999 9999999999999
Q ss_pred HHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Q 001492 587 LTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTY 665 (1067)
Q Consensus 587 ltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~ 665 (1067)
++++|||+||+|||+++.|+..+++.+ +|+++++.|+++++++|.+++++++.+.++++++++.+ +.|||+..+++|
T Consensus 283 ~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 360 (365)
T cd03807 283 NVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAY 360 (365)
T ss_pred cHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 999999999999999999999999986 89999999999999999999999999999999999998 589999999999
Q ss_pred HHHHH
Q 001492 666 LTRVA 670 (1067)
Q Consensus 666 l~~~~ 670 (1067)
.++|+
T Consensus 361 ~~~y~ 365 (365)
T cd03807 361 EELYR 365 (365)
T ss_pred HHHhC
Confidence 99873
No 53
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=100.00 E-value=3.7e-32 Score=296.32 Aligned_cols=244 Identities=23% Similarity=0.393 Sum_probs=183.2
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||.+.+......+.+.++...+ .++ .|+++|||++.++.+++.+.+++ .||++||++|++||+..
T Consensus 4 ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~----~~~-~~v~~TGRs~~~~~~~~~~~~l~--~Pd~~I~svGt~I~~~~ 76 (247)
T PF05116_consen 4 LLASDLDGTLIDGDDEALARLEELLEQQAR----PEI-LFVYVTGRSLESVLRLLREYNLP--QPDYIITSVGTEIYYGE 76 (247)
T ss_dssp EEEEETBTTTBHCHHHHHHHHHHHHHHHHC----CGE-EEEEE-SS-HHHHHHHHHHCT-E--E-SEEEETTTTEEEESS
T ss_pred EEEEECCCCCcCCCHHHHHHHHHHHHHhhC----CCc-eEEEECCCCHHHHHHHHHhCCCC--CCCEEEecCCeEEEEcC
Confidence 667799999874444556677777762223 348 89999999999999999998885 49999999999999953
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHH
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDL 938 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el 938 (1067)
.+.+|..|..+|.+.|..+.+.+.+.++++...+. ...++.+|++|++........+++|
T Consensus 77 -------~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~-------------~~~q~~~k~sy~~~~~~~~~~~~~i 136 (247)
T PF05116_consen 77 -------NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQP-------------ESEQRPFKISYYVDPDDSADILEEI 136 (247)
T ss_dssp -------TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGG-------------CCCGCCTCECEEEETTSHCHHHHHH
T ss_pred -------CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCC-------------ccccCCeeEEEEEecccchhHHHHH
Confidence 46688999999999999999998888877644333 2346688999999766655558899
Q ss_pred HHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCccc
Q 001492 939 RQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018 (1067)
Q Consensus 939 ~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~ 1018 (1067)
++.+...+.+++++++++. ++||+|.++|||.||+||+++|+++++++++ +|||+| | ++||....+||+|+||.+.
T Consensus 137 ~~~l~~~~l~~~~i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~-aGDSgN-D-~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 137 RARLRQRGLRVNVIYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLV-AGDSGN-D-LEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp HHHHHCCTCEEEEEECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEE-EESSGG-G-HHHHCCSSEEEE-TTS-HH
T ss_pred HHHHHHcCCCeeEEEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEE-EeCCCC-c-HHHHcCcCCEEEEcCCCHH
Confidence 9999999999999998875 9999999999999999999999999999999 999999 9 9999999999999999943
Q ss_pred chhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhcc
Q 001492 1019 GSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062 (1067)
Q Consensus 1019 ~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~ 1062 (1067)
. ++.... -....+++ |.+....++||.++|+|||+
T Consensus 213 ~--~~~~~~------~~~~~~~i-y~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 213 L--LSWLLE------KLRQQERI-YFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp H--HHHHHH------CC-TTE---EE-SS-THHHHHHHHHHTTT
T ss_pred H--HHHHHH------hcccCCce-EecCCCCcHHHHHHHHHcCC
Confidence 0 111110 01122334 45567779999999999986
No 54
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=2.2e-30 Score=292.98 Aligned_cols=344 Identities=23% Similarity=0.280 Sum_probs=250.0
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++++.... + .||.++++.+|+++|.+.| |+|++++..... ...
T Consensus 1 kI~i~~~~~~-----------~-~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~---~~~------------------ 45 (348)
T cd03820 1 KILFVIPSLG-----------N-AGGAERVLSNLANALAEKG--HEVTIISLDKGE---PPF------------------ 45 (348)
T ss_pred CeEEEecccc-----------C-CCChHHHHHHHHHHHHhCC--CeEEEEecCCCC---CCc------------------
Confidence 5777774332 3 8999999999999999999 999999985422 000
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA 326 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~ 326 (1067)
....+++.+..++..... ..+..+ .+...+. +.+. ..+||+||++...... ......
T Consensus 46 ~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~-------~~l~-------~~~~d~i~~~~~~~~~--~~~~~~ 102 (348)
T cd03820 46 YELDPKIKVIDLGDKRDS------KLLARF-KKLRRLR-------KLLK-------NNKPDVVISFLTSLLT--FLASLG 102 (348)
T ss_pred cccCCccceeeccccccc------chhccc-cchHHHH-------Hhhc-------ccCCCEEEEcCchHHH--HHHHHh
Confidence 011235666665542210 000000 0111111 1111 1569999999875212 222222
Q ss_pred CC-CcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 327 LN-VPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 327 ~g-iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
.+ +|++++.|+......... .....++..++.+|.+++.|+.........
T Consensus 103 ~~~~~~i~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~----------- 153 (348)
T cd03820 103 LKIVKLIVSEHNSPDAYKKRL------------------RRLLLRRLLYRRADAVVVLTEEDRALYYKK----------- 153 (348)
T ss_pred hccccEEEecCCCccchhhhh------------------HHHHHHHHHHhcCCEEEEeCHHHHHHhhcc-----------
Confidence 34 599999998643221100 000025667899999999999765221111
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
+..++.++|||++...+.+. ...+++.|++
T Consensus 154 --------------~~~~~~vi~~~~~~~~~~~~------------------------------------~~~~~~~i~~ 183 (348)
T cd03820 154 --------------FNKNVVVIPNPLPFPPEEPS------------------------------------SDLKSKRILA 183 (348)
T ss_pred --------------CCCCeEEecCCcChhhcccc------------------------------------CCCCCcEEEE
Confidence 11389999999998765432 0245678999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+|++.+.||++.+++|+..+.+ ..+++.+ |+|+++.. ..+.+++..+++.++|.|.|. .+++..
T Consensus 184 ~g~~~~~K~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~ 248 (348)
T cd03820 184 VGRLVPQKGFDLLIEAWAKIAK--KHPDWKLRIVGDGPER-----------EALEALIKELGLEDRVILLGF--TKNIEE 248 (348)
T ss_pred EEeeccccCHHHHHHHHHHHHh--cCCCeEEEEEeCCCCH-----------HHHHHHHHHcCCCCeEEEcCC--cchHHH
Confidence 9999999999999999999953 4567776 78887653 344567788899999999998 789999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC-CCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN-GGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWV 643 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~ 643 (1067)
+|+.| |++++||..|+||++++|||+||+|||+++. ++..+++.++.+|+++++.|+++++++|.+++++|+.++
T Consensus 249 ~~~~a----d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~ 324 (348)
T cd03820 249 YYAKA----SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRK 324 (348)
T ss_pred HHHhC----CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHH
Confidence 99999 9999999999999999999999999999986 457788887779999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Q 001492 644 ECRKNGWKNIHLFSWPEHCRTYL 666 (1067)
Q Consensus 644 ~~~~~~~~~~~~fsw~~~a~~~l 666 (1067)
++++++++.++.|+|+.++++|.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 325 RMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHHhCHHHHHHHhc
Confidence 99999977778999999999885
No 55
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=4.1e-30 Score=295.36 Aligned_cols=345 Identities=23% Similarity=0.256 Sum_probs=243.0
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
.||.++++.+|+++|.++| |+|++++.... +.. . .. .....++.++....
T Consensus 11 ~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~-~~~-----~---~~-------------~~~~~~~~~~~~~~------ 60 (360)
T cd04951 11 LGGAEKQVVDLADQFVAKG--HQVAIISLTGE-SEV-----K---PP-------------IDATIILNLNMSKN------ 60 (360)
T ss_pred CCCHHHHHHHHHHhcccCC--ceEEEEEEeCC-CCc-----c---ch-------------hhccceEEeccccc------
Confidence 7899999999999999999 99999986321 100 0 00 00111112222110
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
.+..+ . .+..+.+.+.+ .+||+||+|...+..++.++... .++|+|+|.|+......
T Consensus 61 --~~~~~----~----~~~~~~~~~~~-------~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~----- 118 (360)
T cd04951 61 --PLSFL----L----ALWKLRKILRQ-------FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR----- 118 (360)
T ss_pred --chhhH----H----HHHHHHHHHHh-------cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH-----
Confidence 11111 1 11111122222 56999999987665555554443 46899999998642110
Q ss_pred hCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeC
Q 001492 349 QGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428 (1067)
Q Consensus 349 ~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIP 428 (1067)
...+.. +.....++.++++|+...+.+..... .+..++.+||
T Consensus 119 -----------~~~~~~-----~~~~~~~~~~~~~s~~~~~~~~~~~~----------------------~~~~~~~~i~ 160 (360)
T cd04951 119 -----------LRMLAY-----RLTDFLSDLTTNVSKEALDYFIASKA----------------------FNANKSFVVY 160 (360)
T ss_pred -----------HHHHHH-----HHHhhccCceEEEcHHHHHHHHhccC----------------------CCcccEEEEc
Confidence 011111 22334577788888877666543321 1224899999
Q ss_pred CCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001492 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL 508 (1067)
Q Consensus 429 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l 508 (1067)
||+|...|.+... ........+...+++++++++||+.+.||++.+++|+..+.
T Consensus 161 ng~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~-- 214 (360)
T cd04951 161 NGIDTDRFRKDPA------------------------RRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLL-- 214 (360)
T ss_pred cccchhhcCcchH------------------------HHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHH--
Confidence 9999887754321 01112233334567789999999999999999999999885
Q ss_pred cCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCH
Q 001492 509 RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGL 587 (1067)
Q Consensus 509 ~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfgl 587 (1067)
...+++.+ |+|+++.. ..+.+.+..+++.++|.|+|. .+++..+|+.| |++|+||..|+||+
T Consensus 215 ~~~~~~~l~i~G~g~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----d~~v~~s~~e~~~~ 277 (360)
T cd04951 215 SDYLDIKLLIAGDGPLR-----------ATLERLIKALGLSNRVKLLGL--RDDIAAYYNAA----DLFVLSSAWEGFGL 277 (360)
T ss_pred hhCCCeEEEEEcCCCcH-----------HHHHHHHHhcCCCCcEEEecc--cccHHHHHHhh----ceEEecccccCCCh
Confidence 34467776 78887643 345567777888889999997 47899999999 99999999999999
Q ss_pred HHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Q 001492 588 TLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNI-HLFSWPEHCRTY 665 (1067)
Q Consensus 588 tllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~-~~fsw~~~a~~~ 665 (1067)
+++||||+|+|||+++.|+..|++.+ +|++++++|+++++++|.++++ +++.+..++++ ++.+ +.|||+.++++|
T Consensus 278 ~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~ 354 (360)
T cd04951 278 VVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQW 354 (360)
T ss_pred HHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHH
Confidence 99999999999999999999999875 8999999999999999999995 66666666665 6666 699999999999
Q ss_pred HHHHH
Q 001492 666 LTRVA 670 (1067)
Q Consensus 666 l~~~~ 670 (1067)
+++|.
T Consensus 355 ~~~y~ 359 (360)
T cd04951 355 LTLYT 359 (360)
T ss_pred HHHhh
Confidence 99985
No 56
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=8.7e-31 Score=306.50 Aligned_cols=367 Identities=14% Similarity=0.133 Sum_probs=228.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++|.... ..||+++.+.+|++.|.+.| |+|.++......+...
T Consensus 1 mkil~i~~~l-------------~~GGaeri~~~L~~~l~~~G--~~~~i~~~~~~~~~~~------------------- 46 (405)
T PRK10125 1 MNILQFNVRL-------------AEGGAAGVALDLHQRALQQG--LASHFVYGYGKGGKES------------------- 46 (405)
T ss_pred CeEEEEEeee-------------cCCchhHHHHHHHHHHHhcC--CeEEEEEecCCCcccc-------------------
Confidence 8999997422 27999999999999999999 9999987643222110
Q ss_pred cccccCCeE-EEeccCCCCccCcccccccchhH---HHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchh---H
Q 001492 246 EVGESSGAY-IIRIPFGPRDKYLRKELLWPYIQ---EFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAG---D 318 (1067)
Q Consensus 246 ~~~~~~gv~-i~ri~~~~~~~~l~k~~l~~~l~---~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~---~ 318 (1067)
.....+. ++.+ +++ +... -++. .|-...+..+....+.+.+ ..+|||||.|....+ .
T Consensus 47 --~~~~~~~~~~~~--~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~pDviHlH~~~~~~~~~ 110 (405)
T PRK10125 47 --VSHQNYPQVIKH--TPR--MTAM----ANIALFRLFNRDLFGNFNELYRTITR------TPGPVVLHFHVLHSYWLNL 110 (405)
T ss_pred --cccCCcceEEEe--ccc--HHHH----HHHHHHHhcchhhcchHHHHHHHHhh------ccCCCEEEEecccCceecH
Confidence 0001111 1111 111 0000 0000 0000111111121222211 267999999975332 2
Q ss_pred H--HH----HHHhcCCCcEEEEeCCCchhh-----------HHHHHhhC-C---CChhhhhhHhH-HHHhHHHhhccccc
Q 001492 319 S--AA----LLSGALNVPMVLTGHSLGRNK-----------LEQLLKQG-R---QSKEDINSTYK-IMRRIEGEELSLDA 376 (1067)
Q Consensus 319 ~--a~----~l~~~~giP~V~t~H~l~~~~-----------~~~l~~~g-~---~~~~~i~~~y~-~~~ri~~E~~~l~~ 376 (1067)
. .. +..+..++|+|+|+|+.|.-. +..-...- . .+....+...+ +.++...-+..++.
T Consensus 111 ~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~ 190 (405)
T PRK10125 111 KSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLAL 190 (405)
T ss_pred HHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhc
Confidence 1 11 112345799999999987431 11100000 0 00000111101 11111112233456
Q ss_pred CCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCC
Q 001492 377 AELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGT 456 (1067)
Q Consensus 377 Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~ 456 (1067)
++.+|++|+...+.+...+.. .++.|||||||++.+.+.....
T Consensus 191 ~~~iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~~~~~~~------------- 233 (405)
T PRK10125 191 GCQFISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEAILAELP------------- 233 (405)
T ss_pred CcEEEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccccccccc-------------
Confidence 789999999887765443321 2899999999975432211000
Q ss_pred CCCCCCCcchhhHhhhhhccCCCCcEEEEEeC-C-CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchH
Q 001492 457 DGSSPKAIPAIWSDVMRFLTNPHKPMILALSR-P-DPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNAS 533 (1067)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR-l-d~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~ 533 (1067)
.....+++++|+++|| + .+.||+..+++|+..+. +++.| ++|+++...
T Consensus 234 ----------------~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-----~~~~L~ivG~g~~~~-------- 284 (405)
T PRK10125 234 ----------------PVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-----DKIELHTFGKFSPFT-------- 284 (405)
T ss_pred ----------------ccccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-----CCeEEEEEcCCCccc--------
Confidence 0001246788999999 4 46799999999999873 24555 788764210
Q ss_pred HHHHHHHHHHhcCCCCcEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhc
Q 001492 534 VLITVLKLIDKYDLYGQVAYPKHH-KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHR 612 (1067)
Q Consensus 534 ~~~~i~~l~~~~~l~~~V~~~g~~-~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~ 612 (1067)
...|.++|+. +..++.++|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|++.
T Consensus 285 --------------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~ 346 (405)
T PRK10125 285 --------------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQ 346 (405)
T ss_pred --------------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEe
Confidence 1357888876 446899999999 999999999999999999999999999999999999997
Q ss_pred cCCceEEeCCCCHHHHHHHHHHhhcCHHHHHH----HHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 613 ALNNGLLVDPHDQQAIADALLKLVSEKNLWVE----CRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 613 ~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~----~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
+. +|++|+|.|+++||+++ +++..++ +..++++.+ +.|||+.++++|+++|+++
T Consensus 347 ~~-~G~lv~~~d~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 347 KS-GGKTVSEEEVLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred CC-cEEEECCCCHHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 64 89999999999999854 4443333 234577776 5899999999999999753
No 57
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=2.4e-30 Score=304.83 Aligned_cols=375 Identities=17% Similarity=0.197 Sum_probs=248.0
Q ss_pred CChHHHHHHHHHHHHHcC--CCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEecc-CCCCccC
Q 001492 190 TGGQIKYVVELARALARM--PGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIP-FGPRDKY 266 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~--G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~-~~~~~~~ 266 (1067)
.||.++.+++.+.+|.+. + |+|+|+|...+... .+.+.. ...+ .+....+++.++++. .+ .+
T Consensus 13 ggg~ervl~~a~~~l~~~~~~--~~v~i~t~~~~~~~--------~~~l~~-~~~~-f~~~~~~~~~~~~~~~~~---~~ 77 (419)
T cd03806 13 GGGGERVLWCAVRALQKRYPN--NIVVIYTGDLDATP--------EEILEK-VESR-FNIELDRPRIVFFLLKYR---KL 77 (419)
T ss_pred CCCchHHHHHHHHHHHHhCCC--cEEEEECCCCCCCH--------HHHHHH-HHHh-cCeecCCCceEEEEecce---ee
Confidence 559999999999999998 6 99999998653211 000000 0000 011223566666653 21 12
Q ss_pred cccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCch----h
Q 001492 267 LRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGR----N 341 (1067)
Q Consensus 267 l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~----~ 341 (1067)
++. ..|+++..+...+ . .+...+....+ .+||||..|.. ..++... ....++|+|+.+| ++ +
T Consensus 78 ~~~-~~~~r~~~~~~~~-~---~~~~~~~~~~~----~~pDv~i~~~g~~~~~~~~--~~~~~~~~i~y~h--~P~~~~d 144 (419)
T cd03806 78 VEA-STYPRFTLLGQAL-G---SMILGLEALLK----LVPDIFIDTMGYPFTYPLV--RLLGGCPVGAYVH--YPTISTD 144 (419)
T ss_pred ecc-ccCCceeeHHHHH-H---HHHHHHHHHHh----cCCCEEEEcCCcccHHHHH--HHhcCCeEEEEec--CCcchHH
Confidence 222 3444432221111 1 11111111111 36999988863 2222222 2223789999999 33 2
Q ss_pred hHHHHHhhCC--------CChh----hhhhHhH-HHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHH
Q 001492 342 KLEQLLKQGR--------QSKE----DINSTYK-IMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRA 408 (1067)
Q Consensus 342 ~~~~l~~~g~--------~~~~----~i~~~y~-~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~ 408 (1067)
.+.. +..+. +... .+...|+ ++.. .|+..++.||.|+++|+...+.+.+.+..
T Consensus 145 ~l~~-~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~----------- 210 (419)
T cd03806 145 MLQK-VRSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKR----------- 210 (419)
T ss_pred HHHH-HhhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCc-----------
Confidence 2211 11121 1111 1111221 1112 57889999999999999877766444321
Q ss_pred HHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeC
Q 001492 409 RARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSR 488 (1067)
Q Consensus 409 ~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgR 488 (1067)
..++.|||||+|++.|.+... ....+.++|+++||
T Consensus 211 ------------~~~~~vi~~gvd~~~~~~~~~---------------------------------~~~~~~~~il~vgr 245 (419)
T cd03806 211 ------------NTKPSIVYPPCDVEELLKLPL---------------------------------DEKTRENQILSIAQ 245 (419)
T ss_pred ------------CCCcEEEcCCCCHHHhccccc---------------------------------ccccCCcEEEEEEe
Confidence 027899999999987754320 01245679999999
Q ss_pred CCCCCCHHHHHHHHHhcccccCC---CcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 489 PDPKKNITTLLKAFGECRPLREL---ANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 489 ld~~Kgi~~ll~A~~~l~~l~~~---~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+.+.||+..+++||..+.+.... +++.| |+|++... ...++...++++++++++.++|.|+|.++.+++..
T Consensus 246 ~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~ 320 (419)
T cd03806 246 FRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLE 320 (419)
T ss_pred ecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHH
Confidence 99999999999999998632221 34665 77876421 12346788889999999999999999999999999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc-hhhhc---cCCceEEeCCCCHHHHHHHHHHhhcCHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP-VDIHR---ALNNGLLVDPHDQQAIADALLKLVSEKN 640 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~-~eiv~---~~~~Gllv~p~d~~~la~aL~~ll~d~~ 640 (1067)
+|+.| |++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |++++|++|.+++++++
T Consensus 321 ~l~~a----dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 321 ELSTA----SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSE 394 (419)
T ss_pred HHHhC----eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCH
Confidence 99999 9999999999999999999999999999999886 57887 789999984 99999999999999665
Q ss_pred H-HHHHHHHHHHHHHcCCHHHHH
Q 001492 641 L-WVECRKNGWKNIHLFSWPEHC 662 (1067)
Q Consensus 641 ~-~~~~~~~~~~~~~~fsw~~~a 662 (1067)
. ++.+++++++..++|||+...
T Consensus 395 ~~~~~~~~~~~~~~~~fs~~~f~ 417 (419)
T cd03806 395 EERLRIRRAARSSVKRFSDEEFE 417 (419)
T ss_pred HHHHHHHHHHHHHHHhhCHHHhc
Confidence 4 445555555544799998764
No 58
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.98 E-value=1e-30 Score=300.95 Aligned_cols=345 Identities=20% Similarity=0.179 Sum_probs=245.8
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++++... ..||.++++..++++|.++| |+|++++...
T Consensus 1 MkIl~~~~~~-------------~~gG~~~~~~~l~~~l~~~G--~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNTSD-------------ISGGAARAAYRLHRALQAAG--VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEecCC-------------CCCcHHHHHHHHHHHHHhcC--CceeEEEeec-------------------------
Confidence 8999997322 36899999999999999999 9999998721
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
. . +...+. ..+|||||+|+...+........
T Consensus 41 ------~----------~-------------------~~~~~~--------------~~~~diih~~~~~~~~~~~~~~~ 71 (365)
T cd03825 41 ------K----------A-------------------LISKIE--------------IINADIVHLHWIHGGFLSIEDLS 71 (365)
T ss_pred ------c----------h-------------------hhhChh--------------cccCCEEEEEccccCccCHHHHH
Confidence 0 0 000000 14699999998644333333333
Q ss_pred c--CCCcEEEEeCCCchhhHHHHHhh--------CC----C-ChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHH
Q 001492 326 A--LNVPMVLTGHSLGRNKLEQLLKQ--------GR----Q-SKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDE 390 (1067)
Q Consensus 326 ~--~giP~V~t~H~l~~~~~~~l~~~--------g~----~-~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~ 390 (1067)
. .++|+|+|+|+.+.......... +. . ..........+.++. .......++.++++|+...+.
T Consensus 72 ~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~~ 149 (365)
T cd03825 72 KLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLADC 149 (365)
T ss_pred HHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHHH
Confidence 3 39999999998754321100000 00 0 000000011111111 112235677888888866655
Q ss_pred HHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHh
Q 001492 391 QWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSD 470 (1067)
Q Consensus 391 ~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1067)
+...+. .+..++.++|||+|.+.|.+... ...
T Consensus 150 ~~~~~~----------------------~~~~~~~vi~ngi~~~~~~~~~~--------------------------~~~ 181 (365)
T cd03825 150 ARSSSL----------------------FKGIPIEVIPNGIDTTIFRPRDK--------------------------REA 181 (365)
T ss_pred HHhccc----------------------cCCCceEEeCCCCcccccCCCcH--------------------------HHH
Confidence 433321 11238999999999988765431 011
Q ss_pred hhhhccCCCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCC
Q 001492 471 VMRFLTNPHKPMILALSRPDP--KKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDL 547 (1067)
Q Consensus 471 ~~~~~~~~~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l 547 (1067)
...+..+++++++++.++... .||++.+++|+..+... ..+++.+ ++|+++.... .++
T Consensus 182 ~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~~------------------~~~ 242 (365)
T cd03825 182 RKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEIP------------------PDL 242 (365)
T ss_pred HHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhhh------------------ccC
Confidence 223334556677777777654 89999999999988531 2467776 7777653111 144
Q ss_pred CCcEEeCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHH
Q 001492 548 YGQVAYPKHHK-QYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQ 626 (1067)
Q Consensus 548 ~~~V~~~g~~~-~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~ 626 (1067)
..+|.|+|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|++
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~ 318 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPE 318 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHH
Confidence 56899999998 67899999999 99999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 627 AIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 627 ~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
+++++|.+++++++.+.++++++++.+ +.|||+.++++|+++|+++
T Consensus 319 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 319 DLAEGIEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999998 5899999999999999763
No 59
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.98 E-value=9.2e-31 Score=307.03 Aligned_cols=284 Identities=17% Similarity=0.161 Sum_probs=208.3
Q ss_pred CCceEEEEcCCchhHHHHHHH-hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHH--HhHHHhhcccccCCEE
Q 001492 304 VWPYVIHGHYADAGDSAALLS-GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIM--RRIEGEELSLDAAELV 380 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~-~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~--~ri~~E~~~l~~Ad~V 380 (1067)
.++|+||++....+. .+. ...++|+|++.|++....+.++........ ...|++. .....|+.+++.+|.|
T Consensus 103 ~~~D~v~~~~~~~~~---~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~e~~~~~~ad~v 176 (397)
T TIGR03087 103 EPVDAIVVFSSAMAQ---YVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPL---RWIYRREGRLLLAYERAIAARFDAA 176 (397)
T ss_pred CCCCEEEEeccccce---eccccccCCCeEeehhhHHHHHHHHHHhccCcch---hHHHHHHHHHHHHHHHHHHhhCCeE
Confidence 469999999753322 222 345899999999986655444432222111 1222221 1113588899999999
Q ss_pred EeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCC
Q 001492 381 ITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSS 460 (1067)
Q Consensus 381 i~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1067)
+++|+.+.+.+.+.+.. ...++.+||||+|.+.|.+....
T Consensus 177 i~~S~~~~~~l~~~~~~----------------------~~~~v~vipngvd~~~f~~~~~~------------------ 216 (397)
T TIGR03087 177 TFVSRAEAELFRRLAPE----------------------AAGRITAFPNGVDADFFSPDRDY------------------ 216 (397)
T ss_pred EEcCHHHHHHHHHhCCC----------------------CCCCeEEeecccchhhcCCCccc------------------
Confidence 99999888776543321 11389999999999988654310
Q ss_pred CCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEEE-EEecCCChhhhhccchHHH
Q 001492 461 PKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLK----AFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVL 535 (1067)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~----A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~ 535 (1067)
.. . ..+++++|+|+||+++.||++.++. ++..+. ...|++.+ |+|+++..
T Consensus 217 --~~--------~--~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~--~~~p~~~l~ivG~g~~~----------- 271 (397)
T TIGR03087 217 --PN--------P--YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVR--ARRPAAEFYIVGAKPSP----------- 271 (397)
T ss_pred --cC--------C--CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHH--HHCCCcEEEEECCCChH-----------
Confidence 00 0 1245679999999999999999884 455553 34567776 88887631
Q ss_pred HHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccC
Q 001492 536 ITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL 614 (1067)
Q Consensus 536 ~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~ 614 (1067)
. +.++...++|.|.|+++ ++..+|+.| |++|+||. .||||++++||||||+|||+|+.|+. .+....
T Consensus 272 -~----~~~l~~~~~V~~~G~v~--~~~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~ 339 (397)
T TIGR03087 272 -A----VRALAALPGVTVTGSVA--DVRPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALP 339 (397)
T ss_pred -H----HHHhccCCCeEEeeecC--CHHHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccC
Confidence 1 22333456799999975 799999999 99999997 59999999999999999999997643 333345
Q ss_pred CceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHH
Q 001492 615 NNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 615 ~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 671 (1067)
.+|+++. .|+++++++|.++++|+++++++++++++.+ ++|||+.+++++.++|..
T Consensus 340 ~~g~lv~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~~ 396 (397)
T TIGR03087 340 GAELLVA-ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLEQ 396 (397)
T ss_pred CcceEeC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcC
Confidence 6799996 8999999999999999999999999999998 599999999999998853
No 60
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.98 E-value=1.3e-29 Score=287.82 Aligned_cols=347 Identities=24% Similarity=0.295 Sum_probs=255.4
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
.||...++..|+++|.+.| |+|++++....... .....++.++.++.... ..
T Consensus 9 ~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~--~~-- 60 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE----------------------ELEALGVKVIPIPLDRR--GI-- 60 (359)
T ss_pred chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc----------------------ccccCCceEEecccccc--cc--
Confidence 5799999999999999999 99999998532211 01124677777765331 00
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh-cCCCcEEEEeCCCchhhHHHHHh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG-ALNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~-~~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
..+..+ ..+..+.+.+.+ .+||+||+|.......+.+.++ ..+.+++++.|+.+.......
T Consensus 61 -~~~~~~--------~~~~~~~~~~~~-------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-- 122 (359)
T cd03808 61 -NPFKDL--------KALLRLYRLLRK-------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGG-- 122 (359)
T ss_pred -ChHhHH--------HHHHHHHHHHHh-------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccch--
Confidence 011111 111122222222 5799999998766666666665 456778888888754321100
Q ss_pred hCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeC
Q 001492 349 QGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428 (1067)
Q Consensus 349 ~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIP 428 (1067)
. ...+... .++..+..+|.+++.|+...+.+...+... ...++.++|
T Consensus 123 -------~---~~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~---------------------~~~~~~~~~ 169 (359)
T cd03808 123 -------L---KRRLYLL--LERLALRFTDKVIFQNEDDRDLALKLGIIK---------------------KKKTVLIPG 169 (359)
T ss_pred -------h---HHHHHHH--HHHHHHhhccEEEEcCHHHHHHHHHhcCCC---------------------cCceEEecC
Confidence 0 1112222 256678899999999998877664433210 012778889
Q ss_pred CCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001492 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL 508 (1067)
Q Consensus 429 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l 508 (1067)
+|+|...+.+.... ..++.+.|+++||+.+.||++.+++++..+.
T Consensus 170 ~~~~~~~~~~~~~~---------------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~-- 214 (359)
T cd03808 170 SGVDLDRFSPSPEP---------------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK-- 214 (359)
T ss_pred CCCChhhcCccccc---------------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH--
Confidence 99999877543310 1246789999999999999999999999985
Q ss_pred cCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCH
Q 001492 509 RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGL 587 (1067)
Q Consensus 509 ~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfgl 587 (1067)
...+++.+ |+|.++...... .. ++..++..++|.|.|+ .+++..+|+.| |++++|+..|+||+
T Consensus 215 ~~~~~~~l~i~G~~~~~~~~~--------~~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~i~ps~~e~~~~ 278 (359)
T cd03808 215 AKGPNVRLLLVGDGDEENPAA--------IL--EIEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPR 278 (359)
T ss_pred hcCCCeEEEEEcCCCcchhhH--------HH--HHHhcCCcceEEEeec--cccHHHHHHhc----cEEEecCcccCcch
Confidence 34567776 778776432211 10 3566777889999998 68999999999 99999999999999
Q ss_pred HHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Q 001492 588 TLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYL 666 (1067)
Q Consensus 588 tllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l 666 (1067)
+++|||+||+|||+|+.|+..+++.++.+|++++++|+++++++|.+++.+++.+.++++++++.+ ++|||+.++++|+
T Consensus 279 ~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 279 VLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999999999999999999999999989999999999999999999999999999999999999997 6999999999886
No 61
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.97 E-value=1.3e-29 Score=289.35 Aligned_cols=355 Identities=22% Similarity=0.266 Sum_probs=245.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
||++|+.+.. ...+||.++++..|+++|+++| |+|++++......... +.
T Consensus 1 kIl~i~~~~~----------~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~--~~---------------- 50 (359)
T cd03823 1 RILVVNHLYP----------PRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPRQD--KE---------------- 50 (359)
T ss_pred CeeEEcccCC----------cccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCCcc--cc----------------
Confidence 5888885443 1347999999999999999999 9999998754221110 00
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-hhHHHHHHHh
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-AGDSAALLSG 325 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a~~~a~~l~~ 325 (1067)
..+..+...+.............+.....+.......+ .+.+.+ .+||+||+|... .+......++
T Consensus 51 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~ 117 (359)
T cd03823 51 ---VIGVVVYGRPIDEVLRSALPRDLFHLSDYDNPAVVAEF---ARLLED-------FRPDVVHFHHLQGLGVSILRAAR 117 (359)
T ss_pred ---cccceeeccccccccCCCchhhhhHHHhccCHHHHHHH---HHHHHH-------cCCCEEEECCccchHHHHHHHHH
Confidence 01111211110000000000000000000000111111 111111 569999999863 3333444566
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|++.|+.+...... .+ .....|.++++|+...+.+...+.
T Consensus 118 ~~~~~~i~~~hd~~~~~~~~----------------~~---------~~~~~d~ii~~s~~~~~~~~~~~~--------- 163 (359)
T cd03823 118 DRGIPIVLTLHDYWLICPRQ----------------GL---------FKKGGDAVIAPSRFLLDRYVANGL--------- 163 (359)
T ss_pred hcCCCEEEEEeeeeeecchh----------------hh---------hccCCCEEEEeCHHHHHHHHHcCC---------
Confidence 77899999999864322100 00 112239999999987766543321
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
...++.+||||+|...+.+... ....+++.|++
T Consensus 164 --------------~~~~~~vi~n~~~~~~~~~~~~---------------------------------~~~~~~~~i~~ 196 (359)
T cd03823 164 --------------FAEKISVIRNGIDLDRAKRPRR---------------------------------APPGGRLRFGF 196 (359)
T ss_pred --------------CccceEEecCCcChhhcccccc---------------------------------CCCCCceEEEE
Confidence 1138999999999987754320 01345678999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+||+.+.||++.+++++..+.. +++.+ ++|.++..... .... +...+|.|.|+++.+++..
T Consensus 197 ~G~~~~~k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~~-----------~~~~---~~~~~v~~~g~~~~~~~~~ 258 (359)
T cd03823 197 IGQLTPHKGVDLLLEAFKRLPR----GDIELVIVGNGLELEEE-----------SYEL---EGDPRVEFLGAYPQEEIDD 258 (359)
T ss_pred EecCccccCHHHHHHHHHHHHh----cCcEEEEEcCchhhhHH-----------HHhh---cCCCeEEEeCCCCHHHHHH
Confidence 9999999999999999999853 46665 77887643221 0111 5567899999999999999
Q ss_pred HHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHH
Q 001492 565 IYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWV 643 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~ 643 (1067)
+|+.| |++++||. .|+||++++||||||+|||+|+.|+..|++.++.+|+++++.|.++++++|.+++++++.++
T Consensus 259 ~~~~a----d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~ 334 (359)
T cd03823 259 FYAEI----DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLE 334 (359)
T ss_pred HHHhC----CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHH
Confidence 99999 99999997 79999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 644 ECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 644 ~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
.+++++++.... +.++++|+++|+
T Consensus 335 ~~~~~~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 335 RLRAGIEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HHHHhHHHhhhH---HHHHHHHHHHhh
Confidence 999998877543 888888888875
No 62
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.97 E-value=1.1e-30 Score=286.33 Aligned_cols=243 Identities=19% Similarity=0.275 Sum_probs=190.2
Q ss_pred EEEEeCCCCCCC---CchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEE
Q 001492 779 VIALDCYDSKGA---PDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 779 lia~DiDGTLl~---~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~ 855 (1067)
+|++|+||||++ .++.+++.+++++++++++| + .||+||||++.++..++.++++. .|+++||+||+.|+
T Consensus 3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~g----i-~fv~aTGR~~~~~~~~~~~~~~~--~p~~~I~~NGa~I~ 75 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGED----S-LLVYSTGRSPHSYKELQKQKPLL--TPDIWVTSVGSEIY 75 (249)
T ss_pred EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccC----c-eEEEEcCCCHHHHHHHHhcCCCC--CCCEEEEcCCceEE
Confidence 788899999886 67889999999999999997 7 89999999999999999988874 48899999999999
Q ss_pred ecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHH
Q 001492 856 YPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRI 935 (1067)
Q Consensus 856 ~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~ 935 (1067)
+++ ....+..|...+...|..+.+......++... .........+|++|..........+
T Consensus 76 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------------~~~~~~~~~~k~~~~~~~~~~~~~~ 135 (249)
T TIGR01485 76 YGG-------AEVPDQHWAEYLSEKWQRDIVVAITDKFEELK-------------PQPDLEQRPHKVSFFLDPEAAPEVI 135 (249)
T ss_pred eCC-------CCcCCHHHHHHHhcccCHHHHHHHHhcCcccc-------------cCCccccCCeeEEEEechhhhhHHH
Confidence 853 23467889888888887544333222111111 0111124578888876433222235
Q ss_pred HHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcC-CceEEEeCC
Q 001492 936 DDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISG-AHKTLIMKG 1014 (1067)
Q Consensus 936 ~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~-ag~gVaMgN 1014 (1067)
+++.+.+...+..+.++.+++. ++||+|+++|||.||++|++++|++++++++ |||+.| | ++||+. ++.+|||+|
T Consensus 136 ~~l~~~l~~~~~~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~-~GD~~N-D-~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 136 KQLTEMLKETGLDVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLV-CGDSGN-D-IELFEIGSVRGVIVSN 211 (249)
T ss_pred HHHHHHHHhcCCCEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEE-EECChh-H-HHHHHccCCcEEEECC
Confidence 6677777766777888888875 9999999999999999999999999999999 999999 9 999998 779999999
Q ss_pred CcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhccc
Q 001492 1015 VVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKA 1063 (1067)
Q Consensus 1015 A~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~~ 1063 (1067)
|. +++|.+++ +.+.+. .|+|+.+.++||+++|+|||+.
T Consensus 212 a~---~~~k~~~~-------~~~~~~-~~~~~~~~~~Gi~e~l~~~~~~ 249 (249)
T TIGR01485 212 AQ---EELLQWYD-------ENAKDK-IYHASERCAGGIIEAIAHFDLL 249 (249)
T ss_pred CH---HHHHHHHH-------hcccCc-EEEecCCCcHHHHHHHHHcCCC
Confidence 99 55665543 122333 3588999999999999999974
No 63
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=2e-29 Score=287.66 Aligned_cols=283 Identities=31% Similarity=0.440 Sum_probs=226.8
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+||+|+. .....+..+++..++|++++.|+......... .+.+. .++..+..+|.+++
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---------------~~~~~--~~~~~~~~~d~ii~ 154 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRK---------------RLLRA--LLRRALRRADAVIA 154 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCch---------------hhHHH--HHHHHHhcCCeEEe
Confidence 57999999976 35666777788889999999998754332100 01111 24566899999999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
.|+...+.+...+ + +..++.++|||+|...+.+.....
T Consensus 155 ~s~~~~~~~~~~~--~---------------------~~~~~~~i~~~~~~~~~~~~~~~~------------------- 192 (377)
T cd03798 155 VSEALADELKALG--I---------------------DPEKVTVIPNGVDTERFSPADRAE------------------- 192 (377)
T ss_pred CCHHHHHHHHHhc--C---------------------CCCceEEcCCCcCcccCCCcchHH-------------------
Confidence 9998887765442 1 123899999999998876543100
Q ss_pred CcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKL 541 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l 541 (1067)
. .+.....+++.|+++|++.+.||++.+++++..+.. ..+++.+ ++|+++.. ..+...
T Consensus 193 ------~--~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~--~~~~~~l~i~g~~~~~-----------~~~~~~ 251 (377)
T cd03798 193 ------A--RKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLK--KRPDVHLVIVGDGPLR-----------EALEAL 251 (377)
T ss_pred ------H--HhccCCCCceEEEEeccCccccCHHHHHHHHHHHHh--cCCCeEEEEEcCCcch-----------HHHHHH
Confidence 0 111223567889999999999999999999999853 3567776 77776542 345566
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeC
Q 001492 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVD 621 (1067)
Q Consensus 542 ~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 621 (1067)
++.+++.++|.+.|+++.+++..+|+.| |++++|+..|+||++++|||+||+|||+++.|+..+++.++.+|++++
T Consensus 252 ~~~~~~~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~ 327 (377)
T cd03798 252 AAELGLEDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVP 327 (377)
T ss_pred HHhcCCcceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEEC
Confidence 7788888999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHh
Q 001492 622 PHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 622 p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 672 (1067)
++|+++++++|.+++++++. ++..++++.+ +.|+|+.++++|.++|+++
T Consensus 328 ~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 328 PGDPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred CCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999999999887 6777777777 6999999999999998753
No 64
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=99.97 E-value=3e-32 Score=305.89 Aligned_cols=248 Identities=33% Similarity=0.511 Sum_probs=178.4
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCC-------C---eeEEEEEecCCCCCCCCCcCCCc
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMP-------G---VYRVDLFSRQVSSPEVDWSYGEP 232 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G-------~---v~~V~v~t~~~~~~~~~~~y~~~ 232 (1067)
+|-.+|++||+||+++++|| +|| ||||||.+||+++|++|.+.+ | .-+|.++||.+.+.. ...+.++
T Consensus 270 Pmvf~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~-~t~~~q~ 346 (550)
T PF00862_consen 270 PMVFNVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAK-GTTCNQR 346 (550)
T ss_dssp ---SEEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTT-CGGGTSS
T ss_pred ceeEEEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCc-CCCcccc
Confidence 45579999999999999999 999 999999999999999998742 1 136999999885533 2344444
Q ss_pred ccccCCCCCCCCccccccCCeEEEeccCCCC----ccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceE
Q 001492 233 AEMLTGGPEDDGIEVGESSGAYIIRIPFGPR----DKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYV 308 (1067)
Q Consensus 233 ~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~----~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDv 308 (1067)
.|. +...++++|+|+||++. ++|+.|+.+|||+.+|++.+..++.+ ++ ..+||+
T Consensus 347 le~-----------~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~-------e~----~~~Pdl 404 (550)
T PF00862_consen 347 LEK-----------VSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILA-------EL----QGKPDL 404 (550)
T ss_dssp EEE-----------ETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHH-------HH----TS--SE
T ss_pred ccc-----------cCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHH-------Hh----CCCCcE
Confidence 433 44567999999999985 37999999999999999988777654 11 247999
Q ss_pred EEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHH
Q 001492 309 IHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEI 388 (1067)
Q Consensus 309 Ih~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~ 388 (1067)
||+||++++.+|+++++++|+|+++|.|+++..|+. .+.+++++++..|+|+++|.+|..++++||.|||||.|++
T Consensus 405 I~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~----~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 405 IIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYE----DSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp EEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH----TTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred EEeccCcchHHHHHHHhhcCCceehhhhcccccccc----ccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 999999999999999999999999999999999865 4778999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCC
Q 001492 389 DEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQE 440 (1067)
Q Consensus 389 ~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~ 440 (1067)
+.++..++.|.+..+..+.. .-+.|++.++|+||+.++|||+|.+.|.|..
T Consensus 481 ~g~~~~~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred cCCccccCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 99888777776432222212 5678889999999999999999999998876
No 65
>PLN02382 probable sucrose-phosphatase
Probab=99.97 E-value=1.6e-30 Score=302.07 Aligned_cols=246 Identities=19% Similarity=0.282 Sum_probs=188.7
Q ss_pred EEEEEeCCCCCCCC--chhhHHHHHHHH-HHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceE
Q 001492 778 IVIALDCYDSKGAP--DKKMIQIMYDVF-KAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 778 llia~DiDGTLl~~--~~~i~~~~~~al-~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I 854 (1067)
++|++|+||||+++ ++.++....+++ +++.++| + .|++||||++..+.++++++++. .||++||+||++|
T Consensus 10 ~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~g----i-~fv~aTGR~~~~~~~l~~~~~l~--~p~~~I~~nGt~I 82 (413)
T PLN02382 10 LMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRHD----S-LLVFSTGRSPTLYKELRKEKPLL--TPDITIMSVGTEI 82 (413)
T ss_pred EEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcCC----e-eEEEEcCCCHHHHHHHHHhCCCC--CCCEEEEcCCcEE
Confidence 36778999998876 446775555554 8888886 7 89999999999999999998774 4889999999999
Q ss_pred EecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHH
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARR 934 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~ 934 (1067)
++.. ....+..|...+...|....+...+..++.... +....+..+|++|++.+......
T Consensus 83 ~~~~-------~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~-------------q~~~~~~~~Ki~~~~~~~~~~~~ 142 (413)
T PLN02382 83 AYGE-------SMVPDHGWVEYLNKKWDREIVVEETSKFPELKL-------------QPETEQRPHKVSFYVDKKKAQEV 142 (413)
T ss_pred EeCC-------CCccChhHHHHHhccCChhhHHHHHhcCCCccc-------------CCcccCCCeEEEEEechHHhHHH
Confidence 9864 455788999999999986544443333322111 12223567899888754333334
Q ss_pred HHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHh---CCCcccEEEEecCCCCCChhhhhcCCc-eEE
Q 001492 935 IDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRW---RLNVANMFVILGESGDTDYEELISGAH-KTL 1010 (1067)
Q Consensus 935 ~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~---gi~~e~vva~fGDs~N~D~~eML~~ag-~gV 1010 (1067)
.+.+.+.+...+..+.++++++. ++||+|+++|||+||++|+++| |+++++++| |||++| | ++||+.++ +||
T Consensus 143 ~~~l~~~~~~~g~~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ia-fGDs~N-D-leMl~~ag~~gv 218 (413)
T PLN02382 143 IKELSERLEKRGLDVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLV-CGDSGN-D-AELFSVPDVYGV 218 (413)
T ss_pred HHHHHHHHHhcCCcEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEE-EeCCHH-H-HHHHhcCCCCEE
Confidence 45666666666777888888885 9999999999999999999999 999999999 999999 9 99999999 899
Q ss_pred EeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhccc
Q 001492 1011 IMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKA 1063 (1067)
Q Consensus 1011 aMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~~ 1063 (1067)
||+||. +++|..++ ++ ....+.+. .+.+..++||++||+||+++
T Consensus 219 am~NA~---~elk~~a~----~~-~~~~~~~~-~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 219 MVSNAQ---EELLQWYA----EN-AKDNPKII-HATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred EEcCCc---HHHHHHHH----hh-ccCCCcEE-EcCCCCccHHHHHHHHhCCC
Confidence 999999 66665432 11 12233444 45677899999999999986
No 66
>PRK10976 putative hydrolase; Provisional
Probab=99.97 E-value=2.6e-30 Score=286.50 Aligned_cols=245 Identities=16% Similarity=0.136 Sum_probs=163.8
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++.++.++++.++++ +++||+||+.|+...
T Consensus 4 li~~DlDGTLl~~~~~is~~~~~ai~~l~~~G----~-~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~~ 74 (266)
T PRK10976 4 VVASDLDGTLLSPDHTLSPYAKETLKLLTARG----I-HFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDTD 74 (266)
T ss_pred EEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCC----C-EEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECCC
Confidence 56669999999988899999999999999997 7 89999999999999999998773 479999999998643
Q ss_pred CCcccCCcCCCChhhhhc----------cc------cccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEE
Q 001492 859 TYTEEGGKLFPDPDYASH----------ID------YRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCI 922 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~----------i~------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki 922 (1067)
+..... ...+...... +. ..|.................... ..............++
T Consensus 75 ~~~i~~--~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~ki 147 (266)
T PRK10976 75 GNLIFS--HNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKY-----QLYEPGLLEPDGVSKV 147 (266)
T ss_pred CCEehh--hcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcc-----eeechhhcccCCceEE
Confidence 221100 0011100000 00 00000000000000000000000 0000000011234455
Q ss_pred EEEecCCCchHHHHHHHHHHHhc-CCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhh
Q 001492 923 SYLIKDPSKARRIDDLRQKLRMR-GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEE 1001 (1067)
Q Consensus 923 ~~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~e 1001 (1067)
.+...+. ..+.++.+.+... +..+.++.+.+. ++||+|.++|||.||++|++++||++++++| |||+.| | ++
T Consensus 148 ~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~via-fGD~~N-D-i~ 220 (266)
T PRK10976 148 FFTCDSH---EKLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIA-FGDGMN-D-AE 220 (266)
T ss_pred EEEcCCH---HHHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEE-EcCCcc-c-HH
Confidence 4443222 2334555555432 345677777765 9999999999999999999999999999999 999999 9 99
Q ss_pred hhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhcc
Q 001492 1002 LISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062 (1067)
Q Consensus 1002 ML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~ 1062 (1067)
||+.+|+||||+||. +++|..|+ ..+||.++++|||+++|++|.+
T Consensus 221 Ml~~ag~~vAm~NA~---~~vK~~A~-------------~~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 221 MLSMAGKGCIMGNAH---QRLKDLLP-------------ELEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred HHHHcCCCeeecCCc---HHHHHhCC-------------CCeecccCchHHHHHHHHHHhh
Confidence 999999999999999 66777753 2268889999999999999854
No 67
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.97 E-value=6.8e-30 Score=282.82 Aligned_cols=239 Identities=18% Similarity=0.160 Sum_probs=162.0
Q ss_pred EEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEec
Q 001492 778 IVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 778 llia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~ 857 (1067)
-+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+.+++++++++ .++||+||+.|++.
T Consensus 4 kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g----~-~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 74 (264)
T COG0561 4 KLLAFDLDGTLLDSNKTISPETKEALARLREKG----V-KVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYNG 74 (264)
T ss_pred eEEEEcCCCCccCCCCccCHHHHHHHHHHHHCC----C-EEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEecC
Confidence 366679999999998899999999999999997 7 89999999999999999998884 37999999999987
Q ss_pred CCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhc---ccCCC---------------CCCC-CCCCcccccccCC
Q 001492 858 GTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNT---TEGGE---------------NSKN-SSSPIQEDQKSSN 918 (1067)
Q Consensus 858 ~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~---~~~~~---------------~~~~-~~~~~~~~~~~~~ 918 (1067)
+.... ....+......+ .......... ..... .... .......... ..
T Consensus 75 ~~~i~---~~~l~~~~~~~i---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 141 (264)
T COG0561 75 GELLF---QKPLSREDVEEL---------LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAE-LE 141 (264)
T ss_pred CcEEe---eecCCHHHHHHH---------HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhh-cC
Confidence 31111 011111111111 0111110000 00000 0000 0000000000 00
Q ss_pred ceEEEEEecCCCchHHHHHHHHHHHhcCC--cEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCC
Q 001492 919 AHCISYLIKDPSKARRIDDLRQKLRMRGL--RCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGD 996 (1067)
Q Consensus 919 ~~ki~~~~~~~~~~~~~~el~~~L~~~~~--~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N 996 (1067)
..++...... .....++.+.+..... ...+..+.+. ++||+|+++|||.||++|+++||++++++|| |||+.|
T Consensus 142 ~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~a-fGD~~N 216 (264)
T COG0561 142 DNKIIALDKD---HEILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIA-FGDSTN 216 (264)
T ss_pred cceEEEEecC---hHhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEE-eCCccc
Confidence 1111111111 1234455555554322 2334444443 5999999999999999999999999999999 999999
Q ss_pred CChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhccc
Q 001492 997 TDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGKA 1063 (1067)
Q Consensus 997 ~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~~ 1063 (1067)
| ++||+.+|+||||+||. +++|..|+ ++|.+++++||+++|+++.+.
T Consensus 217 -D-~~Ml~~ag~gvam~Na~---~~~k~~A~---------------~vt~~n~~~Gv~~~l~~~~~~ 263 (264)
T COG0561 217 -D-IEMLEVAGLGVAMGNAD---EELKELAD---------------YVTTSNDEDGVAEALEKLLLL 263 (264)
T ss_pred -c-HHHHHhcCeeeeccCCC---HHHHhhCC---------------cccCCccchHHHHHHHHHhcc
Confidence 9 99999999999999998 77888887 999999999999999998764
No 68
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.97 E-value=4.3e-30 Score=285.36 Aligned_cols=248 Identities=13% Similarity=0.128 Sum_probs=164.7
Q ss_pred EEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEec
Q 001492 778 IVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 778 llia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~ 857 (1067)
-+|++|+||||+++++.+++.++++|++++++| + .|+|||||++.++.+++++++++. ..+++||+||+.|++.
T Consensus 4 kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G----~-~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 4 KLIAIDMDGTLLLPDHTISPAVKQAIAAARAKG----V-NVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred EEEEEecCCcCcCCCCccCHHHHHHHHHHHHCC----C-EEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 366679999999988899999999999999997 7 899999999999999999988742 1358999999999864
Q ss_pred CCCc-ccCCcCCCChh-----hhh--ccccc-cccc-------hhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceE
Q 001492 858 GTYT-EEGGKLFPDPD-----YAS--HIDYR-WGCD-------GLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHC 921 (1067)
Q Consensus 858 ~~~~-~~~~~~~~d~~-----~~~--~i~~~-~~~~-------~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 921 (1067)
.... .....+..+.. +.. .+... +..+ .... .............. ...+..........+
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~k 153 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISY-YTVHESFLTGIPLV---FREVEKMDPNLQFPK 153 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcch-hHHHhhhhccCCcc---ccchhhccccCCceE
Confidence 2111 10000000000 000 00000 0000 0000 00000000000000 000000000112334
Q ss_pred EEEEecCCCchHHHHHHHHHHHh-cCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChh
Q 001492 922 ISYLIKDPSKARRIDDLRQKLRM-RGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYE 1000 (1067)
Q Consensus 922 i~~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~ 1000 (1067)
+.+. .+. ..++++.+.+.. ....+.++.+.+. ++||+|+++|||+||++|++++||++++++| |||+.| | +
T Consensus 154 ~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i 225 (270)
T PRK10513 154 VMMI-DEP---EILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMA-IGDQEN-D-I 225 (270)
T ss_pred EEEe-CCH---HHHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-H
Confidence 4332 211 233444444432 2345677777765 9999999999999999999999999999999 999999 9 9
Q ss_pred hhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhc
Q 001492 1001 ELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1001 eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
+||+.+|+||||+||. +++|..|+ +||.++++|||+++|++|.
T Consensus 226 ~Ml~~ag~~vAm~NA~---~~vK~~A~---------------~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 226 AMIEYAGVGVAMGNAI---PSVKEVAQ---------------FVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHHhCCceEEecCcc---HHHHHhcC---------------eeccCCCcchHHHHHHHHh
Confidence 9999999999999999 77888888 9999999999999999985
No 69
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.97 E-value=4.3e-30 Score=285.64 Aligned_cols=241 Identities=15% Similarity=0.187 Sum_probs=163.9
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++.++.+++++++++ +++||+||+.|++..
T Consensus 4 li~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G----~-~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~~ 74 (272)
T PRK15126 4 LAAFDMDGTLLMPDHHLGEKTLSTLARLRERD----I-TLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSLE 74 (272)
T ss_pred EEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcCC
Confidence 55669999999988899999999999999997 7 89999999999999999998874 479999999998643
Q ss_pred CCcccCCcCCCChhhhhcccc--------------cccc-chhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEE
Q 001492 859 TYTEEGGKLFPDPDYASHIDY--------------RWGC-DGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCIS 923 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~--------------~~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 923 (1067)
+..... ..+........+.. .|.. .................. ............+++.
T Consensus 75 ~~~l~~-~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ki~ 147 (272)
T PRK15126 75 GELLHR-QDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQ------LIDLKRLPAHGVTKIC 147 (272)
T ss_pred CCEEEe-ecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceE------EecHHHccccCceEEE
Confidence 221100 00000111110100 0000 000000000000000000 0000000112345655
Q ss_pred EEecCCCchHHHHHHHHHHHhc-CCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhh
Q 001492 924 YLIKDPSKARRIDDLRQKLRMR-GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEEL 1002 (1067)
Q Consensus 924 ~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eM 1002 (1067)
+.. ++ ..++++.+.+... ...+.++.+.+. ++||+|+++|||.||++|++++||++++++| |||+.| | ++|
T Consensus 148 ~~~-~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~M 219 (272)
T PRK15126 148 FCG-DH---DDLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMA-FGDAMN-D-REM 219 (272)
T ss_pred EEC-CH---HHHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEE-ecCCHH-H-HHH
Confidence 442 22 2345666656432 345677777665 9999999999999999999999999999999 999999 9 999
Q ss_pred hcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCcee--ecCcccHHHHHHHHHhhc
Q 001492 1003 ISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAH--VNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1003 L~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~--vt~~~~~dgI~~al~~~g 1061 (1067)
|+.+|+||||+||. +++|..|+ + ||.++++|||+++|++|-
T Consensus 220 l~~ag~~vAm~Na~---~~vK~~A~---------------~~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 220 LGSVGRGFIMGNAM---PQLRAELP---------------HLPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred HHHcCCceeccCCh---HHHHHhCC---------------CCeecCCCcchHHHHHHHHHh
Confidence 99999999999999 77777776 4 778999999999999874
No 70
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.97 E-value=2.5e-29 Score=273.50 Aligned_cols=236 Identities=24% Similarity=0.360 Sum_probs=181.4
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.+ ++++ ++++| + .|+|||||++.++.+++..+++. .+|++||+||+.|++..
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~~g----i-~~viaTGR~~~~v~~~~~~l~l~--~~~~~I~~nGa~i~~~~ 71 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSGDA----V-GFGIATGRSVESAKSRYAKLNLP--SPDVLIARVGTEIYYGP 71 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcCCC----c-eEEEEeCCCHHHHHHHHHhCCCC--CCCEEEECCCceEEeCC
Confidence 467899999988888888877 7776 56665 7 89999999999999999998874 47899999999998753
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHH
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDL 938 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el 938 (1067)
....+..|..++...|....+...+..+++...+ .......+++.|...+ .....+.++
T Consensus 72 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~~~~-~~~~~~~~~ 130 (236)
T TIGR02471 72 -------ELQPDRFWQKHIDHDWRRQAVVEALADIPGLTLQ-------------DDQEQGPFKISYLLDP-EGEPILPQI 130 (236)
T ss_pred -------CCCCChhHHHHHhcCCCHHHHHHHHhcCCCcEeC-------------ChhcCCCeeEEEEECc-ccchHHHHH
Confidence 2234566776776677655444433333321111 1122346788777643 222345667
Q ss_pred HHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCccc
Q 001492 939 RQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018 (1067)
Q Consensus 939 ~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~ 1018 (1067)
.+.+...+..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ |||+.| | ++||+.+|+||+|+||.
T Consensus 131 ~~~l~~~~~~~~~~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~-~GD~~n-D-~~ml~~~~~~iav~na~-- 204 (236)
T TIGR02471 131 RQRLRQQSQAAKVILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILV-AGDSGN-D-EEMLRGLTLGVVVGNHD-- 204 (236)
T ss_pred HHHHHhccCCEEEEEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-EcCCcc-H-HHHHcCCCcEEEEcCCc--
Confidence 7777766666777778775 8999999999999999999999999999999 999999 9 99999999999999999
Q ss_pred chhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhcc
Q 001492 1019 GSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062 (1067)
Q Consensus 1019 ~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~ 1062 (1067)
+++|..|+ ....|||++..++||+++|++|+.
T Consensus 205 -~~~k~~a~-----------~~~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 205 -PELEGLRH-----------QQRIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred -HHHHHhhc-----------CCcEEEcCCCChhHHHHHHHhhCC
Confidence 66666665 123368889999999999999974
No 71
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.97 E-value=2.4e-28 Score=291.57 Aligned_cols=279 Identities=19% Similarity=0.215 Sum_probs=211.4
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChh--hhhhHhHHHHhHHHhhcccccCCEEE
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKE--DINSTYKIMRRIEGEELSLDAAELVI 381 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~--~i~~~y~~~~ri~~E~~~l~~Ad~Vi 381 (1067)
.++||+|++.+..... +++.....+|.++++|+-.... ...... .++..|... ....+.+|.||
T Consensus 210 ~~~di~i~dr~~~~~~-~~~~~~~~~~~v~~lH~~h~~~-------~~~~~~~~~~~~~y~~~------~~~~~~~D~iI 275 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQ-AVLENKGPAKLGVVVHAEHFSE-------SATNETYILWNNYYEYQ------FSNADYIDFFI 275 (500)
T ss_pred CCCCEEEEcCCcccch-HHHhcCCCceEEEEEChhhhcC-------ccCcchhHHHHHHHHHH------HhchhhCCEEE
Confidence 3589999987643222 2445556899999999742111 000000 011112111 12367889999
Q ss_pred eCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 382 TSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 382 ~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
++|+...+.+...+.. ++...+++.+||+|++...+.+..
T Consensus 276 ~~S~~~~~~l~~~~~~-------------------~~~~~~ki~viP~g~~~~~~~~~~--------------------- 315 (500)
T TIGR02918 276 TATDIQNQILKNQFKK-------------------YYNIEPRIYTIPVGSLDELQYPEQ--------------------- 315 (500)
T ss_pred ECCHHHHHHHHHHhhh-------------------hcCCCCcEEEEcCCCcccccCccc---------------------
Confidence 9999776665443321 111224899999998654432211
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
......|+++||+.+.||++.+++|+..+. ...|++.| |+|+++. ...+.+
T Consensus 316 ---------------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~--~~~p~~~l~i~G~G~~-----------~~~l~~ 367 (500)
T TIGR02918 316 ---------------ERKPFSIITASRLAKEKHIDWLVKAVVKAK--KSVPELTFDIYGEGGE-----------KQKLQK 367 (500)
T ss_pred ---------------ccCCeEEEEEeccccccCHHHHHHHHHHHH--hhCCCeEEEEEECchh-----------HHHHHH
Confidence 123457999999999999999999999985 45678887 8898864 255678
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CchhhhccCCceEE
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG-GPVDIHRALNNGLL 619 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~G-g~~eiv~~~~~Gll 619 (1067)
++..+++.+.|.|.|+. ++.++|+.| |+||+||..||||++++||||||+|||+++.+ |+.|+|.++.+|++
T Consensus 368 ~i~~~~l~~~V~f~G~~---~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~l 440 (500)
T TIGR02918 368 IINENQAQDYIHLKGHR---NLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYL 440 (500)
T ss_pred HHHHcCCCCeEEEcCCC---CHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEE
Confidence 88899999999999963 799999999 99999999999999999999999999999985 89999999999999
Q ss_pred eCCC----C----HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 001492 620 VDPH----D----QQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 620 v~p~----d----~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 672 (1067)
+++. | ++++|++|.++++ ++.+++|++++++.++.|||+.++++|.++|+++
T Consensus 441 v~~~~~~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 441 IPIDEEEDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred EeCCccccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9843 3 8899999999995 5678999999999889999999999999998753
No 72
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.97 E-value=5.5e-28 Score=273.49 Aligned_cols=267 Identities=24% Similarity=0.283 Sum_probs=209.3
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+||+|.. .....+.+..+. ++|+|++.|+......... .. .. ..+...+..+|.+++
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~------~~-----~~------~~~~~~~~~~d~ii~ 141 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRK------LR-----LL------LLIRKLYRRADKIVA 141 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccc------hh-----HH------HHHHhhccccceEEE
Confidence 46999999987 444444444443 8999999999855432110 00 00 124567899999999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
.|+...+.+...+.. +..++.+||||+|...+.+.....
T Consensus 142 ~s~~~~~~~~~~~~~----------------------~~~~~~vi~~~~~~~~~~~~~~~~------------------- 180 (353)
T cd03811 142 VSEGVKEDLLKLLGI----------------------PPDKIEVIYNPIDIEEIRALAEEP------------------- 180 (353)
T ss_pred eccchhhhHHHhhcC----------------------CccccEEecCCcChhhcCcccchh-------------------
Confidence 999888777665542 113899999999998776543100
Q ss_pred CcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKL 541 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l 541 (1067)
..+....+++.|+++||+.+.||++.+++|+..+.. ..+++.+ ++|+++.. ..+.+.
T Consensus 181 ---------~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~--~~~~~~l~i~G~~~~~-----------~~~~~~ 238 (353)
T cd03811 181 ---------LELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRK--EGPDARLVILGDGPLR-----------EELEAL 238 (353)
T ss_pred ---------hhcCCCCCceEEEEEecchhhcChHHHHHHHHHhhh--cCCCceEEEEcCCccH-----------HHHHHH
Confidence 011224567899999999999999999999999963 3456665 77877643 344577
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeC
Q 001492 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVD 621 (1067)
Q Consensus 542 ~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 621 (1067)
+..+++.++|.|.|+ .+++..+|+.| |++|+||..|+||++++|||++|+|||+++.||..|++.++.+|++++
T Consensus 239 ~~~~~~~~~v~~~g~--~~~~~~~~~~~----d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~ 312 (353)
T cd03811 239 AKELGLADRVHFLGF--QSNPYPYLKAA----DLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVP 312 (353)
T ss_pred HHhcCCCccEEEecc--cCCHHHHHHhC----CEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEEC
Confidence 888899999999998 46899999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHH---HHHHHHhhcCHHHHHHHHHHHHHHH-HcCC
Q 001492 622 PHDQQAI---ADALLKLVSEKNLWVECRKNGWKNI-HLFS 657 (1067)
Q Consensus 622 p~d~~~l---a~aL~~ll~d~~~~~~~~~~~~~~~-~~fs 657 (1067)
+.|.+++ +++|..++.+++.++++++++++.+ ++|+
T Consensus 313 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 313 VGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CCCHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999 7888888889999999999877776 4665
No 73
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=1.1e-27 Score=278.40 Aligned_cols=330 Identities=18% Similarity=0.142 Sum_probs=221.9
Q ss_pred hHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccccc
Q 001492 192 GQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKEL 271 (1067)
Q Consensus 192 G~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~ 271 (1067)
|.+.++..++..|+++|+ ++|++++.... +...+ .....|++++++|. +... .....
T Consensus 16 g~~~r~~~~~~~l~~~~~-~~v~vi~~~~~--------~~~~~------------~~~~~~v~v~r~~~-~~~~-~~~~~ 72 (371)
T PLN02275 16 GRSPRMQYHALSLARQAS-FQVDVVAYGGS--------EPIPA------------LLNHPSIHIHLMVQ-PRLL-QRLPR 72 (371)
T ss_pred CCCHHHHHHHHHHHhcCC-ceEEEEEecCC--------CCCHH------------HhcCCcEEEEECCC-cccc-ccccc
Confidence 455677888999998873 57999986321 11111 11235899999986 3211 11111
Q ss_pred ccc---hhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc---hhHHHHHHHhcCCCcEEEEeCCCchhhHHH
Q 001492 272 LWP---YIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD---AGDSAALLSGALNVPMVLTGHSLGRNKLEQ 345 (1067)
Q Consensus 272 l~~---~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~---a~~~a~~l~~~~giP~V~t~H~l~~~~~~~ 345 (1067)
++. |+..... .+ ..+...+.. +..+||+||+|.+. +...+.++++..++|+|+|.|+++..
T Consensus 73 ~~~~~~~~~~~~~-~~---~~~~~~~~~-----~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~---- 139 (371)
T PLN02275 73 VLYALALLLKVAI-QF---LMLLWFLCV-----KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT---- 139 (371)
T ss_pred chHHHHHHHHHHH-HH---HHHHHHHHh-----hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH----
Confidence 222 1211111 11 111111100 02579999998742 24456667777899999999998522
Q ss_pred HHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEE
Q 001492 346 LLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMV 425 (1067)
Q Consensus 346 l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~ 425 (1067)
....|.... ...+++.+++ |+..++.||.||++|+...+.+.+.+ |+ ++.
T Consensus 140 ~~~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~-----------------g~--------~i~ 189 (371)
T PLN02275 140 LLALSLGRS---HPLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNW-----------------GI--------RAT 189 (371)
T ss_pred HHhcccCCC---CHHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhc-----------------CC--------CeE
Confidence 112222111 1123344443 77789999999999998877653322 11 378
Q ss_pred EeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhc
Q 001492 426 VIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGEC 505 (1067)
Q Consensus 426 vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l 505 (1067)
+||||. .+.|.+.... .. ...+...+|+++||+.+.||++.+++|+..+
T Consensus 190 vi~n~~-~~~f~~~~~~-----------------------------~~-~~~~~~~~i~~~grl~~~k~~~~li~a~~~l 238 (371)
T PLN02275 190 VLYDQP-PEFFRPASLE-----------------------------IR-LRPNRPALVVSSTSWTPDEDFGILLEAAVMY 238 (371)
T ss_pred EECCCC-HHHcCcCCch-----------------------------hc-ccCCCcEEEEEeCceeccCCHHHHHHHHHHH
Confidence 999984 4556543210 00 0112345788999999999999999999877
Q ss_pred ccc---------------cCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEe-CCCCCCCCHHHHHHH
Q 001492 506 RPL---------------RELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAY-PKHHKQYDVPEIYRL 568 (1067)
Q Consensus 506 ~~l---------------~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~-~g~~~~~dl~~ly~~ 568 (1067)
... ...|++.+ |+|+|+.. .++.++++++++.+ |.| .|+++.++++.+|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~-----------~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~ 306 (371)
T PLN02275 239 DRRVAARLNESDSASGKQSLYPRLLFIITGKGPQK-----------AMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGS 306 (371)
T ss_pred HhhhhhccccccccccccccCCCeEEEEEeCCCCH-----------HHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHh
Confidence 310 23467776 88999853 45678888899876 666 557899999999999
Q ss_pred hhcCCcEEEecC---CCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhh
Q 001492 569 AAKTKGVFINPA---LVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 569 A~~~~dV~v~ps---~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll 636 (1067)
| |+||+|+ ..|+||++++||||||+|||+++.||..|+|+++.+|++++ |+++++++|.+++
T Consensus 307 a----Dv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 307 A----DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred C----CEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9 9999863 24899999999999999999999999999999999999996 6999999999875
No 74
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.96 E-value=3.2e-28 Score=280.37 Aligned_cols=265 Identities=17% Similarity=0.213 Sum_probs=196.5
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhH---HHHHh-hCCCChhhhhhHhHHHHhHHHhhcccccCCE
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKL---EQLLK-QGRQSKEDINSTYKIMRRIEGEELSLDAAEL 379 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~---~~l~~-~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~ 379 (1067)
.+||+||++...... .+....++|.+.++|+..+..+ ..+.. .+..........++.+++ .|+..++.+|.
T Consensus 82 ~~~D~v~~~~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAVAK---GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI--WDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHHhc---cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH--HHHHHhcCCCE
Confidence 469999988652222 1224568999999997532111 11111 111111111112223333 36777999999
Q ss_pred EEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCC
Q 001492 380 VITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGS 459 (1067)
Q Consensus 380 Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 459 (1067)
|+++|+...+.+.+.+.. +..+||||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999888877554432 568999999998775322
Q ss_pred CCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHH
Q 001492 460 SPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVL 539 (1067)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~ 539 (1067)
...+.++++||+.+.||++.+++|+..++ .-.+|+|+++..+. +.
T Consensus 193 ------------------~~~~~il~~G~~~~~K~~~~li~a~~~~~------~~l~ivG~g~~~~~-----------l~ 237 (351)
T cd03804 193 ------------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG------KRLVVIGDGPELDR-----------LR 237 (351)
T ss_pred ------------------CCCCEEEEEEcCccccChHHHHHHHHHCC------CcEEEEECChhHHH-----------HH
Confidence 23467999999999999999999999873 12358888764322 22
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEE
Q 001492 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLL 619 (1067)
Q Consensus 540 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gll 619 (1067)
+ +..++|.|+|+++.+++..+|+.| |++|+||. |+||++++||||||+|||+++.||..|++.++.+|++
T Consensus 238 ~-----~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~ 307 (351)
T cd03804 238 A-----KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGIL 307 (351)
T ss_pred h-----hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEE
Confidence 2 345789999999999999999999 99999999 9999999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 001492 620 VDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTY 665 (1067)
Q Consensus 620 v~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~ 665 (1067)
++|.|+++++++|.+++++++ .+++.+.+.++.|+|+.+.+++
T Consensus 308 ~~~~~~~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 308 FEEQTVESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred eCCCCHHHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 999999999999999999984 2344445555679999988765
No 75
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=6.6e-28 Score=282.78 Aligned_cols=374 Identities=14% Similarity=0.119 Sum_probs=239.3
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCC------CcccccCC
Q 001492 165 KLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYG------EPAEMLTG 238 (1067)
Q Consensus 165 ~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~------~~~e~l~~ 238 (1067)
+-+|++|+.-.+ |=..|....-+-=|..|++.|+ ++|+++.+=....+-..-|+ .|.|...-
T Consensus 322 ~r~~~ivTtAsl-----------PWmTGtavnpL~rAayLa~~~~-~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ 389 (794)
T PLN02501 322 KRHVAIVTTASL-----------PWMTGTAVNPLFRAAYLAKSAK-QNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESY 389 (794)
T ss_pred CCeEEEEEcccC-----------cccccccccHHHHHHHhcccCC-ceEEEEEecCCccccccccCCCcccCCHHHHHHH
Confidence 357898887666 3233444444445778898865 99999876332212112222 22211110
Q ss_pred CCCCCCccccccCCeEEEeccCCCCccCc-ccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-h
Q 001492 239 GPEDDGIEVGESSGAYIIRIPFGPRDKYL-RKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-A 316 (1067)
Q Consensus 239 ~~~~~~~~~~~~~gv~i~ri~~~~~~~~l-~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a 316 (1067)
.+.+..++++-.++..|...|. +|. .+..+.|. -.+.+.|.+ +.|||||.+.+. .
T Consensus 390 ir~wl~~r~g~~~~~~i~fYpg----~~~~~~~SI~p~------------gdI~~~L~~-------f~PDVVHLatP~~L 446 (794)
T PLN02501 390 IRNWLEERIGFKADFKISFYPG----KFSKERRSIIPA------------GDTSQFIPS-------KDADIAILEEPEHL 446 (794)
T ss_pred HHHHHHHhcCCCCCceEEeecc----hhccCCccccch------------HHHHHHhhc-------cCCCEEEECCchhh
Confidence 0111222233334444444442 121 22233331 111122222 679999999983 5
Q ss_pred hHH--HHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccc-cCCEEEeCCHHHHHHHHh
Q 001492 317 GDS--AALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLD-AAELVITSTKQEIDEQWG 393 (1067)
Q Consensus 317 ~~~--a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~-~Ad~Vi~~S~~~~~~~~~ 393 (1067)
|+. +..++++++ |+|.++|.-+..+...+ ..|.+.. ..++.++++ ..+ +||.|+++|.... .+
T Consensus 447 Gw~~~Glr~ArKl~-PVVasyHTny~eYl~~y-~~g~L~~----~llk~l~~~-----v~r~hcD~VIaPS~atq-~L-- 512 (794)
T PLN02501 447 NWYHHGKRWTDKFN-HVVGVVHTNYLEYIKRE-KNGALQA----FFVKHINNW-----VTRAYCHKVLRLSAATQ-DL-- 512 (794)
T ss_pred ccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHh-cchhHHH----HHHHHHHHH-----HHHhhCCEEEcCCHHHH-Hh--
Confidence 666 888899999 99999999877654433 1222111 111122221 111 1899999996544 22
Q ss_pred hcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhh
Q 001492 394 LYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMR 473 (1067)
Q Consensus 394 ~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1067)
.. ++....+|||.+.|.|..... ....
T Consensus 513 --~~-------------------------~vI~nVnGVDte~F~P~~r~~--------------------------~~r~ 539 (794)
T PLN02501 513 --PK-------------------------SVICNVHGVNPKFLKIGEKVA--------------------------EERE 539 (794)
T ss_pred --cc-------------------------cceeecccccccccCCcchhH--------------------------HHHh
Confidence 00 112222699999998764200 0011
Q ss_pred hccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 474 FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 474 ~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
+......+.++|+||+.+.||++.||+|+..+. ...+++.| |+|+|+.. .++..++.++++ .|.
T Consensus 540 lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~--~~~pnvrLvIVGDGP~r-----------eeLe~la~eLgL--~V~ 604 (794)
T PLN02501 540 LGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHK--NELDGFNLDVFGNGEDA-----------HEVQRAAKRLDL--NLN 604 (794)
T ss_pred cCCccccCceEEEEcccccCCHHHHHHHHHHHH--hhCCCeEEEEEcCCccH-----------HHHHHHHHHcCC--EEE
Confidence 222223356899999999999999999999885 34567775 89999864 445667777777 489
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHH
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADAL 632 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL 632 (1067)
|+|. .+++..+|+.+ ||||+||.+|+||++++||||||+|||++++||. +++.++.+|++. .|+++++++|
T Consensus 605 FLG~--~dd~~~lyasa----DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI 675 (794)
T PLN02501 605 FLKG--RDHADDSLHGY----KVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKV 675 (794)
T ss_pred ecCC--CCCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHH
Confidence 9998 46778899999 9999999999999999999999999999999985 446677788876 6899999999
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 001492 633 LKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 633 ~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 669 (1067)
.+++.++..+..+.. ...|||+..++++++.-
T Consensus 676 ~~LLsd~~~rl~~~a-----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 676 KEALANEPQPLTPEQ-----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HHHHhCchhhhHHHH-----HhhCCHHHHHHHHHHhh
Confidence 999998875433321 34899999999998754
No 76
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.96 E-value=1.3e-28 Score=290.35 Aligned_cols=344 Identities=17% Similarity=0.167 Sum_probs=241.9
Q ss_pred ccccccchhHHHH----------HHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcC-CCcEEEEeC
Q 001492 268 RKELLWPYIQEFV----------DGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGAL-NVPMVLTGH 336 (1067)
Q Consensus 268 ~k~~l~~~l~~f~----------~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~-giP~V~t~H 336 (1067)
.+..+||.+..+. ......-..++.++.+.+. .-|+|.+|+.-...++.++.+.. ..++.+..|
T Consensus 85 ~n~~lWPl~H~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~-----~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH 159 (456)
T TIGR02400 85 SNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAEALAPLLQ-----PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLH 159 (456)
T ss_pred hhhhcchhhcccccccccCHHHHHHHHHHHHHHHHHHHHhCC-----CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEe
Confidence 4556777654321 2222333445666666443 24899999886666666666554 468889999
Q ss_pred CCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHH-hcCcc
Q 001492 337 SLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARA-RRGVN 415 (1067)
Q Consensus 337 ~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~-~~Gv~ 415 (1067)
..++.. +-+ .. ++. .-.+ -..+-.||.|...|..+.+.+.... .+.|+.+. ..++.
T Consensus 160 ipfP~~-e~f-~~--lp~-----r~~i-------l~gll~~dligF~t~~~~~~Fl~~~-------~~~l~~~~~~~~~~ 216 (456)
T TIGR02400 160 IPFPSS-EIY-RT--LPW-----RREL-------LEGLLAYDLVGFQTYDDARNFLSAV-------SRELGLETLPNGVE 216 (456)
T ss_pred CCCCCh-HHH-hh--CCc-----HHHH-------HHHHhcCCEEEECCHHHHHHHHHHH-------HHHhCCcccCCceE
Confidence 775533 111 00 010 1112 2346789999999999988775532 23333221 22444
Q ss_pred cCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCH
Q 001492 416 CHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNI 495 (1067)
Q Consensus 416 ~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi 495 (1067)
..|+.. ++.+||||||++.|.+....+++....+ ..+.++ +++++|+++||+++.||+
T Consensus 217 ~~g~~~-~v~viP~GID~~~f~~~~~~~~~~~~~~------------------~lr~~~---~~~~vIl~VgRLd~~KGi 274 (456)
T TIGR02400 217 SGGRTV-RVGAFPIGIDVDRFAEQAKKPSVQKRIA------------------ELRESL---KGRKLIIGVDRLDYSKGL 274 (456)
T ss_pred ECCcEE-EEEEecCcCCHHHHHHHhcChhHHHHHH------------------HHHHHc---CCCeEEEEccccccccCH
Confidence 444444 8999999999999976542222111111 111122 477899999999999999
Q ss_pred HHHHHHHHhcccccCCCc----EEE-EE-----ecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHH
Q 001492 496 TTLLKAFGECRPLRELAN----LTL-IM-----GNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEI 565 (1067)
Q Consensus 496 ~~ll~A~~~l~~l~~~~~----l~l-Iv-----G~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~l 565 (1067)
..+++||+.+. ...|+ +.+ ++ |+++.+++++....+..++|+...+..++.+.+.+.+.++.++++++
T Consensus 275 ~~ll~A~~~ll--~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~al 352 (456)
T TIGR02400 275 PERLLAFERFL--EEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMAL 352 (456)
T ss_pred HHHHHHHHHHH--HhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHH
Confidence 99999999984 44554 333 34 33455556655555555666666666777787788899999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCC----EEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc-CHH
Q 001492 566 YRLAAKTKGVFINPALVEPFGLTLIEAAAHGLP----MVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-EKN 640 (1067)
Q Consensus 566 y~~A~~~~dV~v~ps~~EgfgltllEAmA~G~P----VVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~-d~~ 640 (1067)
|+.| ||||+||.+||||++++||||||+| ||+|+.+|..+.+. +|++|+|+|++++|++|.++++ +++
T Consensus 353 y~aa----Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~~~~~ 425 (456)
T TIGR02400 353 YRAA----DVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARALTMPLE 425 (456)
T ss_pred HHhC----cEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHHcCCHH
Confidence 9999 9999999999999999999999999 88888777777663 7999999999999999999999 457
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 641 LWVECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 641 ~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
+++++.+..++.+..||+..|+++|++.+.
T Consensus 426 er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 426 EREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 778888888888888999999999997653
No 77
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.96 E-value=3.6e-28 Score=285.70 Aligned_cols=276 Identities=18% Similarity=0.237 Sum_probs=215.9
Q ss_pred CCceEEEEcCCc-hhHHHHHHHhcCCCc-EEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEE
Q 001492 304 VWPYVIHGHYAD-AGDSAALLSGALNVP-MVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVI 381 (1067)
Q Consensus 304 ~~pDvIh~h~~~-a~~~a~~l~~~~giP-~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi 381 (1067)
..+|++|+++.. .+..+..+.+..+.+ +|.+.|+..... ... ...+... .+.+++.+|.|+
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~~~----------~~~~~~~-----~~~~~~~~d~ii 188 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--DRY----------PSGYIPL-----RRYLLSSLDAVF 188 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--hhc----------cccchHH-----HHHHHhcCCEEE
Confidence 457899997653 455555667777766 999999753211 000 0111111 233578999999
Q ss_pred eCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 382 TSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 382 ~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
++|+...+.+.+.|+. ...++.++|+|++...+.+..
T Consensus 189 ~~S~~~~~~l~~~~~~----------------------~~~ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 189 PCSEQGRNYLQKRYPA----------------------YKEKIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred ECCHHHHHHHHHHCCC----------------------ccccEEEEECCcccccccCCC---------------------
Confidence 9999988877655543 223889999999987664321
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
...+.+.|+++||+.+.||++.+++|+..+.......++.+ ++|+++. ...+..
T Consensus 226 --------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~ 280 (407)
T cd04946 226 --------------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKE 280 (407)
T ss_pred --------------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHH
Confidence 12356789999999999999999999999964222235554 7888764 244566
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEe
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV 620 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 620 (1067)
++...+..++|.|+|+++.+++..+|+.+ ..|+|++||..||||++++||||||+|||+|+.||..|++.++.+|+++
T Consensus 281 ~~~~~~~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~ 358 (407)
T cd04946 281 LAESKPENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL 358 (407)
T ss_pred HHHhcCCCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe
Confidence 77677778899999999999999999863 1189999999999999999999999999999999999999999999999
Q ss_pred CCC-CHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Q 001492 621 DPH-DQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYL 666 (1067)
Q Consensus 621 ~p~-d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l 666 (1067)
++. |+++++++|.++++||+++++|+++|++.+ ++|||+...++|.
T Consensus 359 ~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 359 SKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred CCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 874 899999999999999999999999999999 5999999998875
No 78
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.96 E-value=8.9e-29 Score=294.03 Aligned_cols=353 Identities=17% Similarity=0.183 Sum_probs=235.5
Q ss_pred CCeEEEeccCCCCc-----cCcccccccchhHHHH----------HHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc
Q 001492 251 SGAYIIRIPFGPRD-----KYLRKELLWPYIQEFV----------DGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD 315 (1067)
Q Consensus 251 ~gv~i~ri~~~~~~-----~~l~k~~l~~~l~~f~----------~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~ 315 (1067)
.+..++.++..+.. ....+..+||.+..+. .........++.++.+.+. ..|+||.|++.
T Consensus 67 ~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~-----~~d~iwihDyh 141 (460)
T cd03788 67 GEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVLR-----PGDLVWVHDYH 141 (460)
T ss_pred CCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEeChh
Confidence 35566666543321 1223556788764432 2222233345555555433 36999999886
Q ss_pred hhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhh
Q 001492 316 AGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGL 394 (1067)
Q Consensus 316 a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~ 394 (1067)
...++.++.+. .+.|+++.+|..++..- .+... + ....+++ .+-.+|.|...+......+...
T Consensus 142 l~llp~~lr~~~~~~~i~~f~HipfP~~e-~~~~l---p-----~~~~ll~-------~~l~~D~igF~t~~~~~~Fl~~ 205 (460)
T cd03788 142 LLLLPQMLRERGPDARIGFFLHIPFPSSE-IFRCL---P-----WREELLR-------GLLGADLIGFQTERYARNFLSC 205 (460)
T ss_pred hhHHHHHHHhhCCCCeEEEEEeCCCCChH-HHhhC---C-----ChHHHHH-------HHhcCCEEEECCHHHHHHHHHH
Confidence 55666666543 46899999998765441 11100 0 0111222 2456999999998877776553
Q ss_pred cCCCchHHHHHHHHHH--hcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhh
Q 001492 395 YDGFDVKLEKVLRARA--RRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVM 472 (1067)
Q Consensus 395 y~~~~~~l~~~l~~~~--~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1067)
.. +.+.... ..++...|+. .++.+||||||++.|.+....++....+++
T Consensus 206 ~~-------~~l~~~~~~~~~i~~~g~~-~~i~vip~GID~~~f~~~~~~~~~~~~~~~--------------------- 256 (460)
T cd03788 206 CS-------RLLGLEVTDDGGVEYGGRR-VRVGAFPIGIDPDAFRKLAASPEVQERAAE--------------------- 256 (460)
T ss_pred HH-------HHcCCcccCCceEEECCEE-EEEEEEeCeEcHHHHHHHhcCchhHHHHHH---------------------
Confidence 21 1111110 1233333433 379999999999999765421111111111
Q ss_pred hhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EEE-EEecC-----CChhhhhccchHHHHHHHHHH
Q 001492 473 RFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTL-IMGNR-----DDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 473 ~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~l-IvG~~-----~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
.....+++++|+++||+++.||+..+++||+.+. ...|+ +.| ++|.. +.+++ +..++..++
T Consensus 257 ~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll--~~~p~~~~~v~Lv~vg~~~~g~~~~~~~-------l~~~l~~~v 327 (460)
T cd03788 257 LRERLGGRKLIVGVDRLDYSKGIPERLLAFERLL--ERYPEWRGKVVLVQIAVPSRTDVPEYQE-------LRREVEELV 327 (460)
T ss_pred HHHhcCCCEEEEEecCccccCCHHHHHHHHHHHH--HhChhhcCCEEEEEEccCCCcCcHHHHH-------HHHHHHHHH
Confidence 1122467889999999999999999999999884 34454 344 55432 22223 334444444
Q ss_pred Hhc-------CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCC----EEEcCCCCchhhh
Q 001492 543 DKY-------DLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLP----MVATKNGGPVDIH 611 (1067)
Q Consensus 543 ~~~-------~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~P----VVat~~Gg~~eiv 611 (1067)
+++ ++.+.+.+.|.++.+++.++|+.| |+||+||..||||++++||||||+| ||+|+.+|..+.
T Consensus 328 ~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~- 402 (460)
T cd03788 328 GRINGKFGTLDWTPVRYLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE- 402 (460)
T ss_pred HHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-
Confidence 433 345556677889999999999999 9999999999999999999999999 888888777776
Q ss_pred ccCCceEEeCCCCHHHHHHHHHHhhcCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 001492 612 RALNNGLLVDPHDQQAIADALLKLVSEK-NLWVECRKNGWKNIHLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 612 ~~~~~Gllv~p~d~~~la~aL~~ll~d~-~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 669 (1067)
+.+|++|+|+|++++|++|.++++++ ++++.+++++++.++.|||..|+++|+..+
T Consensus 403 --~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 403 --LSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred --cCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 46899999999999999999999965 677788888888889999999999998754
No 79
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=1.6e-27 Score=278.08 Aligned_cols=325 Identities=18% Similarity=0.212 Sum_probs=217.3
Q ss_pred CCceEEEEcCCchhHHHHHHH-hcCCCcEEEEeCCCchhhHHHHHhhCC--C-------ChhhhhhHhHHHHhHHHhhcc
Q 001492 304 VWPYVIHGHYADAGDSAALLS-GALNVPMVLTGHSLGRNKLEQLLKQGR--Q-------SKEDINSTYKIMRRIEGEELS 373 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~-~~~giP~V~t~H~l~~~~~~~l~~~g~--~-------~~~~i~~~y~~~~ri~~E~~~ 373 (1067)
.++||+|+|.|+++..+..++ ...++|+|+|.|....... +..|. + ..+.......+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 469999999999999999998 6678999999997643221 11111 0 011111223355666679999
Q ss_pred cccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCcccccccccc
Q 001492 374 LDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLI 453 (1067)
Q Consensus 374 l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~ 453 (1067)
...||.|+|+|+.+..+...+|+. +..+ |||||+|...|.+..+.....+..+
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~~----------------------~pd~--ViPNGid~~~f~~~~e~~~~~~~~k--- 276 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLKR----------------------KPDV--VLPNGLNVKKFSALHEFQNLHAQSK--- 276 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhCC----------------------CCCE--EeCCCcchhhcccchhhhhhhHHhh---
Confidence 999999999999999998877653 2223 9999999999976441111111111
Q ss_pred CCCCCCCCCCcchhhH-----hhhhhccCCCCcEEEE-EeCCCC-CCCHHHHHHHHHhcccccC--CCc---EEE-EEec
Q 001492 454 GGTDGSSPKAIPAIWS-----DVMRFLTNPHKPMILA-LSRPDP-KKNITTLLKAFGECRPLRE--LAN---LTL-IMGN 520 (1067)
Q Consensus 454 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Il~-vgRld~-~Kgi~~ll~A~~~l~~l~~--~~~---l~l-IvG~ 520 (1067)
..+.+ .+.++..++++++++| +||+++ .||++.||+|+.++...-. ..+ +.+ |+..
T Consensus 277 -----------~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~ 345 (590)
T cd03793 277 -----------EKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPA 345 (590)
T ss_pred -----------hhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecC
Confidence 11122 1333445678888888 799999 9999999999999964211 121 223 4444
Q ss_pred CC---Chhhhhccc---------hHHH-----------------------------------------------------
Q 001492 521 RD---DIEEMSSGN---------ASVL----------------------------------------------------- 535 (1067)
Q Consensus 521 ~~---~~~~l~~~~---------~~~~----------------------------------------------------- 535 (1067)
.. ..+.++.+. .++.
T Consensus 346 ~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~ 425 (590)
T cd03793 346 KTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVD 425 (590)
T ss_pred ccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCc
Confidence 31 111222111 1110
Q ss_pred ---HHHHHHHHhcCCCC------cEEe-CCCCCC------CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCE
Q 001492 536 ---ITVLKLIDKYDLYG------QVAY-PKHHKQ------YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPM 599 (1067)
Q Consensus 536 ---~~i~~l~~~~~l~~------~V~~-~g~~~~------~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PV 599 (1067)
..|+..+.+.+|.+ +|.| |-+++. .+..++|+.| |+||+||++||||++++||||||+||
T Consensus 426 ~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~Pv 501 (590)
T cd03793 426 DANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPS 501 (590)
T ss_pred CccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCE
Confidence 11222233333322 2344 334432 2588999999 99999999999999999999999999
Q ss_pred EEcCCCCc----hhhhccC-CceEEeC-------CCCHHHHHHHHHHhhcCHHHHHHHHHHHH--HHHHcCCHHHHHHHH
Q 001492 600 VATKNGGP----VDIHRAL-NNGLLVD-------PHDQQAIADALLKLVSEKNLWVECRKNGW--KNIHLFSWPEHCRTY 665 (1067)
Q Consensus 600 Vat~~Gg~----~eiv~~~-~~Gllv~-------p~d~~~la~aL~~ll~d~~~~~~~~~~~~--~~~~~fsw~~~a~~~ 665 (1067)
|+|+.+|+ .|++.++ ..|++|. +.+.++|+++|.++++. ++++++.+.++ +..+.|+|+..+..|
T Consensus 502 I~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y 580 (590)
T cd03793 502 ITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYY 580 (590)
T ss_pred EEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999988 5666544 3688886 45678899999998854 56676666655 555799999999999
Q ss_pred HHHHHHhHh
Q 001492 666 LTRVAACRM 674 (1067)
Q Consensus 666 l~~~~~~~~ 674 (1067)
.+.+...+.
T Consensus 581 ~~A~~~Al~ 589 (590)
T cd03793 581 RKARQLALS 589 (590)
T ss_pred HHHHHHHhh
Confidence 999987764
No 80
>PLN02887 hydrolase family protein
Probab=99.96 E-value=1.9e-28 Score=292.60 Aligned_cols=249 Identities=13% Similarity=0.102 Sum_probs=163.9
Q ss_pred eEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCC-------EEEE
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFD-------ALIC 848 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d-------~~I~ 848 (1067)
++-+|++|+||||+++++++++.++++|++++++| + .|+|||||++.++.++++.+++.. ++ ++||
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekG----i-~~vIATGR~~~~i~~~l~~L~l~~--~~~~I~~~~p~I~ 379 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNAKALKEALSRG----V-KVVIATGKARPAVIDILKMVDLAG--KDGIISESSPGVF 379 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCC----C-eEEEEcCCCHHHHHHHHHHhCccc--ccceEeecccEEe
Confidence 34467779999999988899999999999999997 7 899999999999999999987642 33 4667
Q ss_pred cCCceEEecCCCcccCCcCCCChhhh---------hcccc------ccccchhHHHHHhhhhcccCCCCCCCCCCCcccc
Q 001492 849 SSGGEMYYPGTYTEEGGKLFPDPDYA---------SHIDY------RWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQED 913 (1067)
Q Consensus 849 ~nGa~I~~~~~~~~~~~~~~~d~~~~---------~~i~~------~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 913 (1067)
+||+.|+...+..... ...+.... ..+.. .|...................... ....+.+.
T Consensus 380 ~NGA~I~d~~g~~I~~--~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~--~i~~l~~~ 455 (580)
T PLN02887 380 LQGLLVYGRQGREIYR--SNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAE--IMSSVDQL 455 (580)
T ss_pred ecCeEEEECCCcEEEE--EeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhcccccc--ccCCHHHh
Confidence 8999998643221000 00111000 00000 000000000000000000000000 00000000
Q ss_pred cccCCceEEEEEecCCCchHHHHHHHHHHHh-cCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEec
Q 001492 914 QKSSNAHCISYLIKDPSKARRIDDLRQKLRM-RGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILG 992 (1067)
Q Consensus 914 ~~~~~~~ki~~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fG 992 (1067)
.......++.+.. ... .....+.+.+.. ....++++.+.+. ++||+|+++|||.||++|++++||+++++|| ||
T Consensus 456 ~~~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lGI~~eeviA-FG 530 (580)
T PLN02887 456 LAAADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLGVSPDEIMA-IG 530 (580)
T ss_pred hcccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcCCCHHHEEE-Ee
Confidence 0112244544432 211 112234444432 2345788888875 9999999999999999999999999999999 99
Q ss_pred CCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhh
Q 001492 993 ESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 993 Ds~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
|+.| | ++||+.+|+|||||||. +++|.+|+ +||.++++|||+++|++|
T Consensus 531 Ds~N-D-IeMLe~AG~gVAMgNA~---eeVK~~Ad---------------~VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 531 DGEN-D-IEMLQLASLGVALSNGA---EKTKAVAD---------------VIGVSNDEDGVADAIYRY 578 (580)
T ss_pred cchh-h-HHHHHHCCCEEEeCCCC---HHHHHhCC---------------EEeCCCCcCHHHHHHHHh
Confidence 9999 9 99999999999999999 77888888 999999999999999987
No 81
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.96 E-value=1.8e-28 Score=264.76 Aligned_cols=221 Identities=15% Similarity=0.168 Sum_probs=157.5
Q ss_pred EEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCC
Q 001492 780 IALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGT 859 (1067)
Q Consensus 780 ia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~ 859 (1067)
|++|+||||+++++.+++.++++|++++++| + .|+|||||++.++.++++.+++ ++++||+||+.|++...
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~G----i-~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~ 71 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESVG----I-PVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEG 71 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHCC----C-EEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCC
Confidence 4679999999988889999999999999997 7 8999999999999999999875 46899999999987632
Q ss_pred CcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHHH
Q 001492 860 YTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDLR 939 (1067)
Q Consensus 860 ~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el~ 939 (1067)
.. ..|...+...|....+.. ......... ..........++.+. . . .. .+.
T Consensus 72 ~~---------~~~~~~~~~~~~~~~~~~----~~~~~~~~~---------~~~~~~~~~~~~~~~-~--~-~~---~~~ 122 (225)
T TIGR01482 72 MD---------DIFLAYLEEEWFLDIVIA----KTFPFSRLK---------VQYPRRASLVKMRYG-I--D-VD---TVR 122 (225)
T ss_pred Cc---------eEEecccCHHHHHHHHHh----cccchhhhc---------cccccccceEEEeec-C--C-HH---HHH
Confidence 11 112222221111111100 000000000 000011112232221 1 1 11 233
Q ss_pred HHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccc
Q 001492 940 QKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKG 1019 (1067)
Q Consensus 940 ~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~ 1019 (1067)
..+...+..+.+. +... ++||+|+++|||.||++|++++|++++++++ |||+.| | ++||+.+|+||||+||.
T Consensus 123 ~~~~~~~~~~~~~-~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--- 194 (225)
T TIGR01482 123 EIIKELGLNLVAV-DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLV-CGDSEN-D-IDLFEVPGFGVAVANAQ--- 194 (225)
T ss_pred HHHHhcCceEEEe-cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE-ECCCHh-h-HHHHHhcCceEEcCChh---
Confidence 3333333334333 4454 8999999999999999999999999999999 999999 9 99999999999999999
Q ss_pred hhhhhcccCcCCCCCCCCCCCceeecCcccHHH----HHHHHHhhc
Q 001492 1020 SEELLRTTNLRDDIVPSESPLIAHVNANAKVDE----IANALRQVG 1061 (1067)
Q Consensus 1020 ~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dg----I~~al~~~g 1061 (1067)
+++|.+|+ +||.+++++| |+++|++||
T Consensus 195 ~~~k~~A~---------------~vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 195 PELKEWAD---------------YVTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred HHHHHhcC---------------eecCCCCCCcHHHHHHHHHHhhC
Confidence 67888888 9999999999 999999987
No 82
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=1.2e-27 Score=259.34 Aligned_cols=226 Identities=13% Similarity=0.117 Sum_probs=158.9
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+.+++..++++ +++||+||+.|+...
T Consensus 5 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~G----~-~~~iaTGR~~~~~~~~~~~l~~~----~~~i~~nGa~i~~~~ 75 (230)
T PRK01158 5 AIAIDIDGTITDKDRRLSLKAVEAIRKAEKLG----I-PVILATGNVLCFARAAAKLIGTS----GPVIAENGGVISVGF 75 (230)
T ss_pred EEEEecCCCcCCCCCccCHHHHHHHHHHHHCC----C-EEEEEcCCchHHHHHHHHHhCCC----CcEEEecCeEEEEcC
Confidence 56669999999988889999999999999997 7 89999999999999999998873 479999999998752
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHH
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDL 938 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el 938 (1067)
.... .+...+. .....+..+...+..... .+...........+. ... .. ..+++
T Consensus 76 ~~~~---------~~~~~~~------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~-~~---~~~~~ 129 (230)
T PRK01158 76 DGKR---------IFLGDIE------ECEKAYSELKKRFPEAST------SLTKLDPDYRKTEVA-LRR-TV---PVEEV 129 (230)
T ss_pred CCCE---------EEEcchH------HHHHHHHHHHHhccccce------eeecCCcccccceee-ecc-cc---cHHHH
Confidence 1110 0111111 111111111111110000 000000000011111 111 11 12345
Q ss_pred HHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCccc
Q 001492 939 RQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018 (1067)
Q Consensus 939 ~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~ 1018 (1067)
.+.+...+..+.++.+ . .++||+|+++|||.|+++|++++|++++++++ |||+.| | ++||+.+|+||||+||.
T Consensus 130 ~~~l~~~~~~~~~~~~-~-~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~-- 202 (230)
T PRK01158 130 RELLEELGLDLEIVDS-G-FAIHIKSPGVNKGTGLKKLAELMGIDPEEVAA-IGDSEN-D-LEMFEVAGFGVAVANAD-- 202 (230)
T ss_pred HHHHHHcCCcEEEEec-c-eEEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HHHHHhcCceEEecCcc--
Confidence 5555544444555444 3 37999999999999999999999999999999 999999 9 99999999999999999
Q ss_pred chhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhcc
Q 001492 1019 GSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVGK 1062 (1067)
Q Consensus 1019 ~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g~ 1062 (1067)
+++|..|+ |||.++++|||+++|++|.+
T Consensus 203 -~~vk~~a~---------------~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 203 -EELKEAAD---------------YVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred -HHHHHhcc---------------eEecCCCcChHHHHHHHHhC
Confidence 67777777 99999999999999999864
No 83
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.96 E-value=4.4e-28 Score=269.20 Aligned_cols=244 Identities=13% Similarity=0.146 Sum_probs=159.7
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+.+++++++++ .+++||+||+.|+...
T Consensus 9 lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~G----i-~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 9 LIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQ----V-PVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQLDE 80 (271)
T ss_pred EEEEeCccCCcCCCCcCcHHHHHHHHHHHHcC----C-eEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEEecC
Confidence 55669999999988888999999999999997 7 89999999999999999998873 2479999999999753
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhh---ccc-CCCCC---------CCCCCCcccccccCCceEEEEE
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMN---TTE-GGENS---------KNSSSPIQEDQKSSNAHCISYL 925 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~---~~~-~~~~~---------~~~~~~~~~~~~~~~~~ki~~~ 925 (1067)
...... .+ ..+...+ ..+.+...+..... ... ..... .................++.+.
T Consensus 81 ~~~~~~-~~---~~~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (271)
T PRK03669 81 QWQDHP-DF---PRIISGI----SHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWR 152 (271)
T ss_pred cccCCC-Cc---eEeecCC----CHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEec
Confidence 211000 00 0001111 11111111111100 000 00000 0000000000000011222221
Q ss_pred ecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCC---CcccEEEEecCCCCCChhhh
Q 001492 926 IKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRL---NVANMFVILGESGDTDYEEL 1002 (1067)
Q Consensus 926 ~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi---~~e~vva~fGDs~N~D~~eM 1002 (1067)
.. ...+.++.+.+... .++++. .+ .++||+|+++|||+||++|++++|| +++++|| |||+.| | ++|
T Consensus 153 -~~---~~~~~~~~~~l~~~--~~~~~~-~~-~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~via-fGDs~N-D-i~M 221 (271)
T PRK03669 153 -DS---DERMAQFTARLAEL--GLQFVQ-GA-RFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLG-LGDGPN-D-APL 221 (271)
T ss_pred -CC---HHHHHHHHHHHHHC--CCEEEe-cC-eeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEE-EcCCHH-H-HHH
Confidence 11 22345666666543 456555 33 4899999999999999999999999 9999999 999999 9 999
Q ss_pred hcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhc
Q 001492 1003 ISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1003 L~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
|+.+|+||||||+.+..+. .+..+...+|+|...+.|||.++|+||.
T Consensus 222 l~~ag~gvAM~~~~~~~~~------------l~~~~~~~~~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 222 LDVMDYAVVVKGLNREGVH------------LQDDDPARVYRTQREGPEGWREGLDHFF 268 (271)
T ss_pred HHhCCEEEEecCCCCCCcc------------cccccCCceEeccCCCcHHHHHHHHHHH
Confidence 9999999999998832211 1234556679999999999999999984
No 84
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.2e-26 Score=270.50 Aligned_cols=448 Identities=20% Similarity=0.224 Sum_probs=288.2
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCccccc------CCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEML------TGG 239 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l------~~~ 239 (1067)
|||++++.... |+ -.+||..-.+..|.++|++.| ++|.|+.+.+. .+...+....+.. ..+
T Consensus 1 M~Il~v~~E~~----p~-----vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF----PF-----VKTGGLADVVGALPKALAKRG--VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec----Cc-----cccCcHHHHHHHhHHHHHhcC--CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 78998886554 22 579999999999999999999 99999988654 2222222110000 000
Q ss_pred CCC-CCccccc-cCCeEEEeccCCCCccCccc--ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCC-CCCceEEEEcCC
Q 001492 240 PED-DGIEVGE-SSGAYIIRIPFGPRDKYLRK--ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQ-PVWPYVIHGHYA 314 (1067)
Q Consensus 240 ~~~-~~~~~~~-~~gv~i~ri~~~~~~~~l~k--~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~-~~~pDvIh~h~~ 314 (1067)
... +..+... ..++.++-+.. + .+..+ ...+.+.+. ..+.. .+.++..+.+..+. ...|||||+|+|
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~-~--~~f~r~~~~~~~~~d~----~~Rf~-~F~~a~~~~~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDN-P--ALFKRPDSTLYGYYDN----AERFA-FFSLAAAELAPLGLISWLPDIVHAHDW 139 (487)
T ss_pred cceEEEEEeecccCCCcEEEecC-h--hhcCccccccCCCCcH----HHHHH-HHHHHHHHHhhhcCCCCCCCEEEeecH
Confidence 000 1111111 11133332221 1 11111 122222221 11111 11222222222211 146999999999
Q ss_pred chhHHHHHHHh----cCCCcEEEEeCCCchhhHHH--HH-hhCCCChhhhhhHhH--HHHhHHHhhcccccCCEEEeCCH
Q 001492 315 DAGDSAALLSG----ALNVPMVLTGHSLGRNKLEQ--LL-KQGRQSKEDINSTYK--IMRRIEGEELSLDAAELVITSTK 385 (1067)
Q Consensus 315 ~a~~~a~~l~~----~~giP~V~t~H~l~~~~~~~--l~-~~g~~~~~~i~~~y~--~~~ri~~E~~~l~~Ad~Vi~~S~ 385 (1067)
.++.+..+++. ...+|.|+|+|++....... .. ..|. +..-.. .+. ..-.+..++..+..||.|.++|+
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgL-p~~~~~-~~~l~~~~~~~~lK~gi~~ad~vttVSp 217 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGL-PFEAYA-SFGLEFYGQISFLKGGLYYADAVTTVSP 217 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcC-CHHHhh-hceeeecCcchhhhhhheeccEEEEECH
Confidence 99999999988 44799999999874432211 11 1111 110000 000 00112346778999999999999
Q ss_pred HHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcc
Q 001492 386 QEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIP 465 (1067)
Q Consensus 386 ~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (1067)
..+++++ +..+...++..++.+. + ++.-|-||+|.+.+.|... ..+...+.... .+ ....
T Consensus 218 tYa~Ei~--t~~~g~gl~g~l~~~~-----~------~l~GI~NgiD~~~wnp~~d-----~~~~~~y~~~~-~~-~k~~ 277 (487)
T COG0297 218 TYAGEIY--TPEYGEGLEGLLSWRS-----G------KLSGILNGIDYDLWNPETD-----PYIAANYSAEV-LP-AKAE 277 (487)
T ss_pred HHHHhhc--cccccccchhhhhhcc-----c------cEEEEEeeEEecccCcccc-----cchhccCCccc-hh-hhHH
Confidence 9999987 3444444444443332 2 8899999999999987652 11111110000 00 0011
Q ss_pred hhhHhhhhhccC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHH
Q 001492 466 AIWSDVMRFLTN--PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLID 543 (1067)
Q Consensus 466 ~~~~~~~~~~~~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~ 543 (1067)
.......++..+ .+.|++.++||+..+||++.+++++..+.+ .. -..++.|.++ ..+.+.+..+..
T Consensus 278 nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~--~~-~~~vilG~gd---------~~le~~~~~la~ 345 (487)
T COG0297 278 NKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLE--QG-WQLVLLGTGD---------PELEEALRALAS 345 (487)
T ss_pred HHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHH--hC-ceEEEEecCc---------HHHHHHHHHHHH
Confidence 112223344443 367999999999999999999999999953 33 2335788873 335567777887
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--------CC
Q 001492 544 KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--------LN 615 (1067)
Q Consensus 544 ~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--------~~ 615 (1067)
++.. ++...-..+..-...+|+.| |++++||++|||||+-++||++|++.|+...||.+|.|.+ ..
T Consensus 346 ~~~~--~~~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~g 419 (487)
T COG0297 346 RHPG--RVLVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVG 419 (487)
T ss_pred hcCc--eEEEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCce
Confidence 7754 66665555556677788888 9999999999999999999999999999999999998875 47
Q ss_pred ceEEeCCCCHHHHHHHHHHhhc---CHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhcC
Q 001492 616 NGLLVDPHDQQAIADALLKLVS---EKNL-WVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~---d~~~-~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~ 676 (1067)
+|+++.+.++++++.+|.+++. .+.. |+.+..+++. ..|+|+..+.+|.+.|+.++...
T Consensus 420 tGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 420 TGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred eEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccc
Confidence 8999999999999999999987 4444 8888888887 68999999999999999998653
No 85
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.95 E-value=8e-28 Score=262.78 Aligned_cols=234 Identities=18% Similarity=0.221 Sum_probs=162.1
Q ss_pred EEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecCC
Q 001492 780 IALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPGT 859 (1067)
Q Consensus 780 ia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~~ 859 (1067)
|++|+||||++++..++++++++|++++++| + .|+|||||++..+.+++.++++. +++||+||+.|+....
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g----~-~~~i~TGR~~~~~~~~~~~~~~~----~~~I~~nGa~i~~~~~ 71 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEKG----I-KLVIATGRSYSSIKRLLKELGID----DYFICSNGALIDDPKG 71 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHTT----C-EEEEECSSTHHHHHHHHHHTTHC----SEEEEGGGTEEEETTT
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhcccc----e-EEEEEccCcccccccccccccch----hhhcccccceeeeccc
Confidence 4679999999988889999999999999997 7 79999999999999999998873 6999999999944432
Q ss_pred CcccCCcCCCChhhhhc---------ccc------cc-ccch---hHHHHHhhhhcccCCCCCCCCCCCcccccccCCce
Q 001492 860 YTEEGGKLFPDPDYASH---------IDY------RW-GCDG---LKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAH 920 (1067)
Q Consensus 860 ~~~~~~~~~~d~~~~~~---------i~~------~~-~~~~---l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (1067)
.... ....+...... +.. .| .... ............... .............
T Consensus 72 ~~l~--~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~ 142 (254)
T PF08282_consen 72 KILY--EKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKES-------IVSEDDLEDEEIF 142 (254)
T ss_dssp EEEE--EESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEE-------ESHHHHHHCSSES
T ss_pred ccch--hhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccc-------cccccccccccce
Confidence 1110 00011110000 000 00 0000 000000000000000 0000111223456
Q ss_pred EEEEEecCCCchHHHHHHHHHHHhc-CCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCh
Q 001492 921 CISYLIKDPSKARRIDDLRQKLRMR-GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDY 999 (1067)
Q Consensus 921 ki~~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~ 999 (1067)
++.+.. +. ..++.+.+.+... ...+.+..+... ++||+|+++|||.||++|++++|++++++++ |||+.| |
T Consensus 143 ki~~~~-~~---~~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~-~GD~~N-D- 214 (254)
T PF08282_consen 143 KILFFP-DP---EDLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIA-FGDSEN-D- 214 (254)
T ss_dssp EEEEES-CH---HHHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEE-EESSGG-G-
T ss_pred eeeccc-cc---hhhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEE-eecccc-c-
Confidence 776443 22 2445565555543 233577777776 9999999999999999999999999999999 999999 9
Q ss_pred hhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHH
Q 001492 1000 EELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057 (1067)
Q Consensus 1000 ~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al 1057 (1067)
++||+.+|+||||+||. ++++.+|+ ++|..++++||+++|
T Consensus 215 ~~Ml~~~~~~~am~na~---~~~k~~a~---------------~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 215 IEMLELAGYSVAMGNAT---PELKKAAD---------------YITPSNNDDGVAKAI 254 (254)
T ss_dssp HHHHHHSSEEEEETTS----HHHHHHSS---------------EEESSGTCTHHHHHH
T ss_pred HhHHhhcCeEEEEcCCC---HHHHHhCC---------------EEecCCCCChHHHhC
Confidence 99999999999999999 88899998 999999999999986
No 86
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.95 E-value=3.8e-26 Score=265.14 Aligned_cols=273 Identities=25% Similarity=0.340 Sum_probs=210.8
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.++|+|+++....... ..+......+.|+++|+.......... ...+...|+ . ....+..+|.||++
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~~---~---~~~~~~~~d~ii~~ 164 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPV------HSLINNFYE---Y---VFENLDKVDGVIVA 164 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCccccc------ccccchhhH---H---HHhChhhCCEEEEc
Confidence 3599999998644333 234444466789999975321110000 000111121 1 12246889999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+...+... .++.+||||++...+.+..
T Consensus 165 s~~~~~~l~~~~~~~-----------------------~~v~~ip~g~~~~~~~~~~----------------------- 198 (372)
T cd04949 165 TEQQKQDLQKQFGNY-----------------------NPIYTIPVGSIDPLKLPAQ----------------------- 198 (372)
T ss_pred cHHHHHHHHHHhCCC-----------------------CceEEEcccccChhhcccc-----------------------
Confidence 998887765554321 1589999999987765421
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
......+.|+++||+.+.||++.+++|+..+. ...|++.| |+|.++.. ..+..++
T Consensus 199 -----------~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~--~~~~~~~l~i~G~g~~~-----------~~~~~~~ 254 (372)
T cd04949 199 -----------FKQRKPHKIITVARLAPEKQLDQLIKAFAKVV--KQVPDATLDIYGYGDEE-----------EKLKELI 254 (372)
T ss_pred -----------hhhcCCCeEEEEEccCcccCHHHHHHHHHHHH--HhCCCcEEEEEEeCchH-----------HHHHHHH
Confidence 01234568999999999999999999999985 45677776 78887642 3445666
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CchhhhccCCceEEeC
Q 001492 543 DKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG-GPVDIHRALNNGLLVD 621 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~G-g~~eiv~~~~~Gllv~ 621 (1067)
..+++.++|.|.|+ .+++..+|+.| |++|+||..||||++++|||+||+|||+++.| |+.+++.++.+|++++
T Consensus 255 ~~~~~~~~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~ 328 (372)
T cd04949 255 EELGLEDYVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVP 328 (372)
T ss_pred HHcCCcceEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeC
Confidence 78888899999995 67899999999 99999999999999999999999999999987 8999999999999999
Q ss_pred CCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 001492 622 PHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTY 665 (1067)
Q Consensus 622 p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~ 665 (1067)
+.|+++++++|.+++++++.++++++++++.+++|||+.++++|
T Consensus 329 ~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 329 KGDIEALAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred CCcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999999999998899999998764
No 87
>PHA01630 putative group 1 glycosyl transferase
Probab=99.95 E-value=2e-26 Score=262.01 Aligned_cols=255 Identities=13% Similarity=0.098 Sum_probs=186.7
Q ss_pred EcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcc-cccCCEEEeCCHHHHH
Q 001492 311 GHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELS-LDAAELVITSTKQEID 389 (1067)
Q Consensus 311 ~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~-l~~Ad~Vi~~S~~~~~ 389 (1067)
.|+...+...+......|+|+|++.|+..+ +.+.+ +... .+.+|.|+++|+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~----------------------l~~~~--~~~~~~~~ad~ii~~S~~~~~ 107 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA----------------------ISHTA--LYFFRNQPVDEIVVPSQWSKN 107 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech----------------------hhHHH--HHHHhhccCCEEEECCHHHHH
Confidence 555445555555556679999999998321 11111 3334 6889999999998877
Q ss_pred HHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhH
Q 001492 390 EQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWS 469 (1067)
Q Consensus 390 ~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1067)
.+... |+. ...++.+||||+|.+.|.+...
T Consensus 108 ~l~~~------------------g~~----~~~~i~vIpNGVd~~~f~~~~~---------------------------- 137 (331)
T PHA01630 108 AFYTS------------------GLK----IPQPIYVIPHNLNPRMFEYKPK---------------------------- 137 (331)
T ss_pred HHHHc------------------CCC----CCCCEEEECCCCCHHHcCCCcc----------------------------
Confidence 65332 111 0137999999999988864331
Q ss_pred hhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCC
Q 001492 470 DVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLY 548 (1067)
Q Consensus 470 ~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~ 548 (1067)
...+..+++++||+.+.||++.|++|+..+. ...+++.+ |+|++.... ++ .++.
T Consensus 138 ------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~--~~~~~~~llivG~~~~~~-----------~l------~~~~ 192 (331)
T PHA01630 138 ------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQ--NEGYDFYFLIKSSNMLDP-----------RL------FGLN 192 (331)
T ss_pred ------ccCCCEEEEEeccccccCCHHHHHHHHHHHH--hhCCCEEEEEEeCcccch-----------hh------cccc
Confidence 0123446667788999999999999999985 33456665 777543210 11 1222
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCC------
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDP------ 622 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p------ 622 (1067)
+ +.+.++.+++..+|+.| |+||+||..|+||++++||||||+|||+|+.||..|++.++.||++|++
T Consensus 193 ~---~~~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~ 265 (331)
T PHA01630 193 G---VKTPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKL 265 (331)
T ss_pred c---eeccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccc
Confidence 2 34567889999999999 9999999999999999999999999999999999999999888777642
Q ss_pred -------------CCHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 623 -------------HDQQAIADALLKLVSE---KNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 623 -------------~d~~~la~aL~~ll~d---~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
.|.+++++++.+++.+ ++.++.+.+++....++|||+.++++|+++|++
T Consensus 266 ~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 266 WYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3778899999999987 344555555555555899999999999999864
No 88
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.95 E-value=6.9e-27 Score=259.84 Aligned_cols=246 Identities=13% Similarity=0.098 Sum_probs=158.1
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+.++++++++. .++||+||+.|++..
T Consensus 5 li~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G----~-~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~~ 75 (272)
T PRK10530 5 VIALDLDGTLLTPKKTILPESLEALARAREAG----Y-KVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDYQ 75 (272)
T ss_pred EEEEeCCCceECCCCccCHHHHHHHHHHHHCC----C-EEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEecC
Confidence 66669999999988899999999999999997 7 89999999999999999998874 369999999999642
Q ss_pred CCcccCCcCCCChhhhh---------cccc------cc-ccchhHHHH--HhhhhcccCCCCCCCCCCC--cccc-cccC
Q 001492 859 TYTEEGGKLFPDPDYAS---------HIDY------RW-GCDGLKKTI--WKLMNTTEGGENSKNSSSP--IQED-QKSS 917 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~---------~i~~------~~-~~~~l~~~l--~~~~~~~~~~~~~~~~~~~--~~~~-~~~~ 917 (1067)
...... ....+..-.. .+.. .+ ......... ..+.......... ....+ +... ....
T Consensus 76 ~~~~l~-~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 153 (272)
T PRK10530 76 AKKVLE-ADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRP-TFTQVDSLAQAARQVN 153 (272)
T ss_pred CCEEEE-ecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhccc-ceEEcccHHHHHhhcC
Confidence 211000 0001110000 0000 00 000000000 0000000000000 00000 0000 0011
Q ss_pred CceEEEEEecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCC
Q 001492 918 NAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDT 997 (1067)
Q Consensus 918 ~~~ki~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~ 997 (1067)
...++... ... ....+++.+.+... ..+.++.+... ++||+|.++|||.||+++++++|++++++++ |||+.|
T Consensus 154 ~~~~i~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~-~GD~~N- 226 (272)
T PRK10530 154 AIWKFALT--HED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVA-FGDNFN- 226 (272)
T ss_pred CcEEEEEe--cCC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEE-eCCChh-
Confidence 12333222 111 11233444444332 22445555554 8999999999999999999999999999999 999999
Q ss_pred ChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhc
Q 001492 998 DYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 998 D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
| ++||+.+|+|||||||. +++|..|+ ++|+++++|||+++|++|-
T Consensus 227 D-i~m~~~ag~~vamgna~---~~lk~~Ad---------------~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 227 D-ISMLEAAGLGVAMGNAD---DAVKARAD---------------LVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred h-HHHHHhcCceEEecCch---HHHHHhCC---------------EEEecCCCCcHHHHHHHHh
Confidence 9 99999999999999998 66677777 9999999999999999874
No 89
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.94 E-value=1.4e-26 Score=255.11 Aligned_cols=241 Identities=13% Similarity=0.072 Sum_probs=157.9
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+.+.++++|++++++| + .|+|||||++..+.++++++++ ++++||+||+.|++..
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g----~-~~~~~TgR~~~~~~~~~~~~~~----~~~~I~~NGa~i~~~~ 71 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELG----I-PVIPCTSKTAAEVEYLRKELGL----EDPFIVENGGAIYGPR 71 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCC----C-eEEEEcCCCHHHHHHHHHHcCC----CCcEEEcCCeEEEeCC
Confidence 35679999998886634446999999999997 7 8999999999999999999887 3689999999999864
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcc----cCCCCCCC-------CCCCc-ccccccCCceEEEEEe
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTT----EGGENSKN-------SSSPI-QEDQKSSNAHCISYLI 926 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~----~~~~~~~~-------~~~~~-~~~~~~~~~~ki~~~~ 926 (1067)
+... .+..| .....|..+.+...+..+.... ........ ..... ..........++.+.
T Consensus 72 ~~~~------~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 142 (256)
T TIGR01486 72 GWFT------EPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW- 142 (256)
T ss_pred Cccc------CCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-
Confidence 2110 00001 1122223333333332221100 00000000 00000 000000112222222
Q ss_pred cCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCC--cccEEEEecCCCCCChhhhhc
Q 001492 927 KDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLN--VANMFVILGESGDTDYEELIS 1004 (1067)
Q Consensus 927 ~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~--~e~vva~fGDs~N~D~~eML~ 1004 (1067)
.. ..+..+.+.+...+ +.++.+ +. ++||+|+++|||.||++|++++|++ .+++++ |||+.| | ++||+
T Consensus 143 -~~---~~~~~~~~~~~~~~--~~~~~s-~~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a-~GD~~N-D-~~Ml~ 211 (256)
T TIGR01486 143 -SE---ERRERFTEALVELG--LEVTHG-NR-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVG-LGDSPN-D-LPLLE 211 (256)
T ss_pred -Ch---HHHHHHHHHHHHcC--CEEEeC-Cc-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEE-EcCCHh-h-HHHHH
Confidence 22 23455666665433 455554 33 9999999999999999999999999 999999 999999 9 99999
Q ss_pred CCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhh
Q 001492 1005 GAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 1005 ~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
.+|+||||+||.+..+++|... +...|||+++++|||+++|+||
T Consensus 212 ~ag~~vam~Na~~~~~~lk~~~------------~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 212 VVDLAVVVPGPNGPNVSLKPGD------------PGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred HCCEEEEeCCCCCCccccCccC------------CCcEEEcCCCCcHHHHHHHHHh
Confidence 9999999999985434444330 0123899999999999999986
No 90
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.94 E-value=6.2e-25 Score=253.91 Aligned_cols=344 Identities=18% Similarity=0.152 Sum_probs=238.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCc
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++++ ...||.++...+|+++|.++| |+|++++..... . .+
T Consensus 2 ~~i~i~~---------------~g~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~~-~--------~~----------- 44 (357)
T PRK00726 2 KKILLAG---------------GGTGGHVFPALALAEELKKRG--WEVLYLGTARGM-E--------AR----------- 44 (357)
T ss_pred cEEEEEc---------------CcchHhhhHHHHHHHHHHhCC--CEEEEEECCCch-h--------hh-----------
Confidence 7888775 126799999999999999999 999999874210 0 00
Q ss_pred cccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHh
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~ 325 (1067)
.....|+.+++++..... ....+..+..+ ...+..+.++.+.+.+ .+|||||+|.+..+..+.++++
T Consensus 45 -~~~~~g~~~~~~~~~~~~----~~~~~~~l~~~-~~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~~~ 111 (357)
T PRK00726 45 -LVPKAGIEFHFIPSGGLR----RKGSLANLKAP-FKLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLAAR 111 (357)
T ss_pred -ccccCCCcEEEEeccCcC----CCChHHHHHHH-HHHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHHHH
Confidence 001147888888763321 11111111111 0112222233333332 5799999998766666777778
Q ss_pred cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHH
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKV 405 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~ 405 (1067)
..++|+|++.|+..... .+++.+..+|.+++++++... . .
T Consensus 112 ~~~~p~v~~~~~~~~~~--------------------------~~r~~~~~~d~ii~~~~~~~~---~----~------- 151 (357)
T PRK00726 112 LLGIPLVIHEQNAVPGL--------------------------ANKLLARFAKKVATAFPGAFP---E----F------- 151 (357)
T ss_pred HcCCCEEEEcCCCCccH--------------------------HHHHHHHHhchheECchhhhh---c----c-------
Confidence 88999999888642210 123345678999998874321 1 1
Q ss_pred HHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEE
Q 001492 406 LRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILA 485 (1067)
Q Consensus 406 l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 485 (1067)
+..++.+||||+|.+.+.+... ..++...++.++|++
T Consensus 152 --------------~~~~i~vi~n~v~~~~~~~~~~-----------------------------~~~~~~~~~~~~i~~ 188 (357)
T PRK00726 152 --------------FKPKAVVTGNPVREEILALAAP-----------------------------PARLAGREGKPTLLV 188 (357)
T ss_pred --------------CCCCEEEECCCCChHhhcccch-----------------------------hhhccCCCCCeEEEE
Confidence 1138999999999876543210 011222356788999
Q ss_pred EeCCCCCCCHHHHH-HHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHH
Q 001492 486 LSRPDPKKNITTLL-KAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPE 564 (1067)
Q Consensus 486 vgRld~~Kgi~~ll-~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ 564 (1067)
+|+..+.|++..++ +|+.++.. .+...+++|+++. +.+....+ +++. |.|.|++ ++++.
T Consensus 189 ~gg~~~~~~~~~~l~~a~~~~~~---~~~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~ 248 (357)
T PRK00726 189 VGGSQGARVLNEAVPEALALLPE---ALQVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAA 248 (357)
T ss_pred ECCcHhHHHHHHHHHHHHHHhhh---CcEEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHH
Confidence 99998888876665 99988842 2433347788752 23334444 5653 9999996 79999
Q ss_pred HHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC--------chhhhccCCceEEeCCCC--HHHHHHHHHH
Q 001492 565 IYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG--------PVDIHRALNNGLLVDPHD--QQAIADALLK 634 (1067)
Q Consensus 565 ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg--------~~eiv~~~~~Gllv~p~d--~~~la~aL~~ 634 (1067)
+|..| |++|.++ .+.+++|||+||+|||++..++ ..+.+.+..+|+++++.| +++++++|.+
T Consensus 249 ~~~~~----d~~i~~~----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ 320 (357)
T PRK00726 249 AYAAA----DLVICRA----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLE 320 (357)
T ss_pred HHHhC----CEEEECC----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHH
Confidence 99999 9999875 2689999999999999987643 235677778999999888 9999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 635 LVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 635 ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
++++++++++|++++++..+.++...+++.+++.++
T Consensus 321 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 321 LLSDPERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 999999999999999998889999999999888764
No 91
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=1.7e-24 Score=243.66 Aligned_cols=219 Identities=15% Similarity=0.206 Sum_probs=162.7
Q ss_pred cccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCcccccccccc
Q 001492 374 LDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLI 453 (1067)
Q Consensus 374 l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~ 453 (1067)
+.+.+.+|++|+...+.+.+. |+.. .+ +||+|+|++.|.+... ..
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~~~------~i-~I~~GVD~~~f~p~~~---~~------- 134 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GLQV------DL-PVFHGINFKIVENAEK---LV------- 134 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CCCC------ce-eeeCCCChhhcCccch---hh-------
Confidence 344668999999887765332 2221 33 5789999998876431 00
Q ss_pred CCCCCCCCCCcchhhHhhhhhcc-CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC----cEEE-EEecCCChhhh
Q 001492 454 GGTDGSSPKAIPAIWSDVMRFLT-NPHKPMILALSRPDPKKNITTLLKAFGECRPLRELA----NLTL-IMGNRDDIEEM 527 (1067)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~----~l~l-IvG~~~~~~~l 527 (1067)
+ ..+.++.. .++.++|+++||+.+.||++.+++|+..+.+ ..+ ++.+ ++|..
T Consensus 135 -----------~---~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~--~~p~~~~~i~l~ivG~~------ 192 (335)
T PHA01633 135 -----------P---QLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNT--KYPDIAKKIHFFVISHK------ 192 (335)
T ss_pred -----------H---HHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHH--hCCCccccEEEEEEcHH------
Confidence 0 01112211 2467789999999999999999999999853 333 3455 44421
Q ss_pred hccchHHHHHHHHHHHhcCCCCcEEeC---CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC
Q 001492 528 SSGNASVLITVLKLIDKYDLYGQVAYP---KHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604 (1067)
Q Consensus 528 ~~~~~~~~~~i~~l~~~~~l~~~V~~~---g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~ 604 (1067)
...++++.++|.|. |+.+.+++.++|+.| |+||+||.+||||++++||||||+|||+++.
T Consensus 193 -------------~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~ 255 (335)
T PHA01633 193 -------------QFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLM 255 (335)
T ss_pred -------------HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccC
Confidence 12445677889998 555778999999999 9999999999999999999999999999999
Q ss_pred CCchhhhcc------------------CCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 001492 605 GGPVDIHRA------------------LNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYL 666 (1067)
Q Consensus 605 Gg~~eiv~~------------------~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l 666 (1067)
||..|++.. ...|+++++.|+++++++|.+++...+ +..+++++++.++.|+|+.++++|+
T Consensus 256 ~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 256 PPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred CCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhh
Confidence 998886441 224778889999999999999966432 3334778888889999999999986
Q ss_pred H
Q 001492 667 T 667 (1067)
Q Consensus 667 ~ 667 (1067)
+
T Consensus 335 ~ 335 (335)
T PHA01633 335 E 335 (335)
T ss_pred C
Confidence 3
No 92
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.94 E-value=2.9e-26 Score=252.69 Aligned_cols=237 Identities=16% Similarity=0.148 Sum_probs=157.9
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+.++++.+++. .++||+||+.|++..
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G----~-~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~ 71 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKG----I-KVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQ 71 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCC----C-eEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCC
Confidence 46779999999988889999999999999997 7 89999999999999999998763 379999999999763
Q ss_pred CCcccCCcCCCChhhhhcc---------ccc-cccc------hhHHHHHhhhhcccCCCCCCCCCCCcc-cccccCCceE
Q 001492 859 TYTEEGGKLFPDPDYASHI---------DYR-WGCD------GLKKTIWKLMNTTEGGENSKNSSSPIQ-EDQKSSNAHC 921 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i---------~~~-~~~~------~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~k 921 (1067)
+... . ....+......+ ... +..+ .....+........... ..+.. .........+
T Consensus 72 ~~~i-~-~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 144 (256)
T TIGR00099 72 GEIL-Y-KKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPK-----LEVVDIQYLPDDILKI 144 (256)
T ss_pred CCEE-e-ecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCc-----ceeccchhhhcccceE
Confidence 2111 0 000111000000 000 0000 00000000000000000 00000 0000111222
Q ss_pred EEEEecCCCchHHHHHHHHHHHh--cCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCh
Q 001492 922 ISYLIKDPSKARRIDDLRQKLRM--RGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDY 999 (1067)
Q Consensus 922 i~~~~~~~~~~~~~~el~~~L~~--~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~ 999 (1067)
+.+. .+. ..++++.+.+.. ....+.++.+.+. ++||+|.++|||.||+++++++|++++++++ |||+.| |
T Consensus 145 ~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~-~GD~~n-D- 216 (256)
T TIGR00099 145 LLLF-LDP---EDLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDVIA-FGDGMN-D- 216 (256)
T ss_pred EEEE-CCH---HHHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHEEE-eCCcHH-h-
Confidence 3232 222 234455555542 2345777777775 9999999999999999999999999999999 999999 9
Q ss_pred hhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHH
Q 001492 1000 EELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057 (1067)
Q Consensus 1000 ~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al 1057 (1067)
++||+.+|++|||+||. +++|..|+ +++.++++|||+++|
T Consensus 217 ~~m~~~~~~~~a~~na~---~~~k~~a~---------------~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 217 IEMLEAAGYGVAMGNAD---EELKALAD---------------YVTDSNNEDGVALAL 256 (256)
T ss_pred HHHHHhCCceeEecCch---HHHHHhCC---------------EEecCCCCcchhhhC
Confidence 99999999999999998 56777777 999999999999875
No 93
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.94 E-value=1.4e-25 Score=263.01 Aligned_cols=360 Identities=13% Similarity=0.121 Sum_probs=250.1
Q ss_pred CeEEEeccCCCCc-----cCcccccccchhHHHH----------HHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCch
Q 001492 252 GAYIIRIPFGPRD-----KYLRKELLWPYIQEFV----------DGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA 316 (1067)
Q Consensus 252 gv~i~ri~~~~~~-----~~l~k~~l~~~l~~f~----------~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a 316 (1067)
+..+.+++..+.. ....+..+||.+..+. ......-..++.++.+... .-|+|-.|+.-.
T Consensus 69 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~-----~~d~vWVhDYhL 143 (487)
T TIGR02398 69 KLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEAACLEAA-----EGATVWVHDYNL 143 (487)
T ss_pred ceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEecchh
Confidence 4555666654321 1234556777653221 2222233345555555443 247899998755
Q ss_pred hHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhc
Q 001492 317 GDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLY 395 (1067)
Q Consensus 317 ~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y 395 (1067)
..++..+.++ ...++-|..|..++..- -+ .. ++. .-.+ -..+-.||.|-..|....+.+....
T Consensus 144 ~llp~~LR~~~~~~~IgfFlHiPFPs~e-if-r~--LP~-----r~~l-------l~glL~aDliGFqt~~y~~~Fl~~~ 207 (487)
T TIGR02398 144 WLVPGYIRQLRPDLKIAFFHHTPFPSAD-VF-NI--LPW-----REQI-------IGSLLCCDYIGFHIPRYVENFVDAA 207 (487)
T ss_pred hHHHHHHHHhCCCCeEEEEeeCCCCChH-HH-hh--CCc-----hHHH-------HHHHhcCCeEEeCCHHHHHHHHHHH
Confidence 5666666554 35788999998766441 11 00 010 1112 2246789999999999888776532
Q ss_pred CCCchHHHHHHHHHHh----------------------cCcccCCCCCCCEEEeCCCCCCCCccCCCCCCcccccccccc
Q 001492 396 DGFDVKLEKVLRARAR----------------------RGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLI 453 (1067)
Q Consensus 396 ~~~~~~l~~~l~~~~~----------------------~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~ 453 (1067)
.+.|+.+.. .+|...|+.. ++.++|+|||++.|.+....+++....+
T Consensus 208 -------~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v-~v~~~PiGID~~~f~~~~~~~~~~~~~~--- 276 (487)
T TIGR02398 208 -------RGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV-KLGAHPVGTDPERIRSALAAASIREMME--- 276 (487)
T ss_pred -------HHHhCCccccccccccccccccccccccccccceeECCEEE-EEEEEECEecHHHHHHHhcCchHHHHHH---
Confidence 222322211 1244445555 7999999999999976543222222211
Q ss_pred CCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EEE-EEecC-----CC
Q 001492 454 GGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTL-IMGNR-----DD 523 (1067)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~l-IvG~~-----~~ 523 (1067)
..+.++ .++++|++++|+++.|||..+++||+++ |..+|+ ++| ++|.. +.
T Consensus 277 ---------------~lr~~~---~~~kiIl~VDRLDy~KGI~~kl~Afe~~--L~~~Pe~~gkv~Lvqi~~psr~~v~~ 336 (487)
T TIGR02398 277 ---------------RIRSEL---AGVKLILSAERVDYTKGILEKLNAYERL--LERRPELLGKVTLVTACVPAASGMTI 336 (487)
T ss_pred ---------------HHHHHc---CCceEEEEecccccccCHHHHHHHHHHH--HHhCccccCceEEEEEeCCCcccchH
Confidence 112222 3688999999999999999999999999 466775 343 44443 45
Q ss_pred hhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCC----CE
Q 001492 524 IEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL----PM 599 (1067)
Q Consensus 524 ~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~----PV 599 (1067)
+++++.+..+...+||....+.++.+.++|.+.++.+++.++|+.| ||+++||++||||||.+||+||+. |+
T Consensus 337 y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 337 YDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 6778888888888899998989999999999999999999999999 999999999999999999999976 77
Q ss_pred EEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHH
Q 001492 600 VATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECR-KNGWKNIHLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 600 Vat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~-~~~~~~~~~fsw~~~a~~~l~~~~ 670 (1067)
|.|..+|..+.+ ..+++|||+|++++|++|.++|++|...++.+ +..++.+..++...|++.|+..+.
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVS 481 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 777766655443 46999999999999999999999876544444 444555689999999999997664
No 94
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.93 E-value=1.5e-25 Score=240.40 Aligned_cols=213 Identities=12% Similarity=0.171 Sum_probs=152.0
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+..+++.++++ .++||+||+.|++..
T Consensus 3 ~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g----~-~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 3 LVAIDIDGTLTEPNRMISERAIEAIRKAEKKG----I-PVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYNK 73 (215)
T ss_pred EEEEecCCCcCCCCcccCHHHHHHHHHHHHCC----C-EEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeCC
Confidence 55669999999988899999999999999997 7 89999999999999999998763 379999999999863
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHHHHH
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRIDDL 938 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~el 938 (1067)
.... +..... .|. .... .. ..+..... .. ........+... .. ..+.+
T Consensus 74 ~~~~----------~~~~~~-~~~---~~~~-~~--~~~~~~~~---------~~--~~~~~~~~~~~~-~~---~~~~~ 121 (215)
T TIGR01487 74 EDIF----------LANMEE-EWF---LDEE-KK--KRFPRDRL---------SN--EYPRASLVIMRE-GK---DVDEV 121 (215)
T ss_pred CcEE----------Eecccc-hhh---HHHh-hh--hhhhhhhc---------cc--ccceeEEEEecC-Cc---cHHHH
Confidence 1110 000000 000 0000 00 00000000 00 000111222221 22 23455
Q ss_pred HHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCccc
Q 001492 939 RQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018 (1067)
Q Consensus 939 ~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~ 1018 (1067)
.+.+...+ +.+..+ + .++||+|.+++||.||+++++++|++++++++ |||+.| | ++||+.+|+||||+||.
T Consensus 122 ~~~l~~~~--~~~~~~-~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-iGDs~N-D-~~ml~~ag~~vam~na~-- 192 (215)
T TIGR01487 122 REIIKERG--LNLVDS-G-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAA-IGDSEN-D-IDLFRVVGFKVAVANAD-- 192 (215)
T ss_pred HHHHHhCC--eEEEec-C-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHhCCCeEEcCCcc--
Confidence 55665433 444443 4 38999999999999999999999999999999 999999 9 99999999999999998
Q ss_pred chhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHH
Q 001492 1019 GSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057 (1067)
Q Consensus 1019 ~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al 1057 (1067)
+++|.+|+ |+|.+..++||+++|
T Consensus 193 -~~~k~~A~---------------~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 193 -DQLKEIAD---------------YVTSNPYGEGVVEVL 215 (215)
T ss_pred -HHHHHhCC---------------EEcCCCCCchhhhhC
Confidence 77888888 999999999999875
No 95
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.93 E-value=5.5e-24 Score=244.99 Aligned_cols=331 Identities=19% Similarity=0.185 Sum_probs=226.5
Q ss_pred CCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcc
Q 001492 189 DTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLR 268 (1067)
Q Consensus 189 ~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 268 (1067)
.+||..+++..|+++|.++| |+|+++|..... . .+ .....+++++++++... .
T Consensus 8 ~~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~~-~--------~~------------~~~~~~~~~~~~~~~~~----~ 60 (350)
T cd03785 8 GTGGHIFPALALAEELRERG--AEVLFLGTKRGL-E--------AR------------LVPKAGIPLHTIPVGGL----R 60 (350)
T ss_pred CchhhhhHHHHHHHHHHhCC--CEEEEEECCCcc-h--------hh------------cccccCCceEEEEecCc----C
Confidence 37899999999999999999 999999884210 0 00 00113678888876432 1
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHh
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
+...+..+..+.. ++..+.++.+.+.+ .+||+||+|...++..+.++++..++|+|++.|+....
T Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~------- 125 (350)
T cd03785 61 RKGSLKKLKAPFK-LLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPG------- 125 (350)
T ss_pred CCChHHHHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCcc-------
Confidence 1111221211111 11222222222222 57999999987666667777888899999877754211
Q ss_pred hCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeC
Q 001492 349 QGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428 (1067)
Q Consensus 349 ~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIP 428 (1067)
+. ++..++.+|.|++.|+...+. + .+ .++.+||
T Consensus 126 --------------~~-----~~~~~~~~~~vi~~s~~~~~~----~---~~---------------------~~~~~i~ 158 (350)
T cd03785 126 --------------LA-----NRLLARFADRVALSFPETAKY----F---PK---------------------DKAVVTG 158 (350)
T ss_pred --------------HH-----HHHHHHhhCEEEEcchhhhhc----C---CC---------------------CcEEEEC
Confidence 01 123456789999999876543 1 11 2899999
Q ss_pred CCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHH-HHHHHHhccc
Q 001492 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITT-LLKAFGECRP 507 (1067)
Q Consensus 429 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~ 507 (1067)
||+|.+.+.+... ..++..++++++|+++|+....|+... +++|+..+.
T Consensus 159 n~v~~~~~~~~~~-----------------------------~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~- 208 (350)
T cd03785 159 NPVREEILALDRE-----------------------------RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL- 208 (350)
T ss_pred CCCchHHhhhhhh-----------------------------HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh-
Confidence 9999876653210 122234567788888888777777765 458888774
Q ss_pred ccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCH
Q 001492 508 LRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGL 587 (1067)
Q Consensus 508 l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfgl 587 (1067)
.....+.+++|++. . +++.+.+..+ .++|.|.|+. +++.++|+.| |++|.++ + ++
T Consensus 209 -~~~~~~~~i~G~g~-~-----------~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~s---g-~~ 263 (350)
T cd03785 209 -RKRLQVIHQTGKGD-L-----------EEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRA---G-AS 263 (350)
T ss_pred -ccCeEEEEEcCCcc-H-----------HHHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECC---C-Hh
Confidence 22222334667762 2 3344455554 4689999996 7999999999 9999875 2 68
Q ss_pred HHHHHHHcCCCEEEcCCCC--------chhhhccCCceEEeCCC--CHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCC
Q 001492 588 TLIEAAAHGLPMVATKNGG--------PVDIHRALNNGLLVDPH--DQQAIADALLKLVSEKNLWVECRKNGWKNIHLFS 657 (1067)
Q Consensus 588 tllEAmA~G~PVVat~~Gg--------~~eiv~~~~~Gllv~p~--d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fs 657 (1067)
+++|||++|+|||++..++ ..+.+.+..+|+++++. |+++++++|.+++++++.++++++++++.+..+.
T Consensus 264 t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~ 343 (350)
T cd03785 264 TVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDA 343 (350)
T ss_pred HHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH
Confidence 9999999999999987654 24666677899999987 8999999999999999999999999998887777
Q ss_pred HHHHHH
Q 001492 658 WPEHCR 663 (1067)
Q Consensus 658 w~~~a~ 663 (1067)
-+++++
T Consensus 344 ~~~i~~ 349 (350)
T cd03785 344 AERIAD 349 (350)
T ss_pred HHHHHh
Confidence 777664
No 96
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=8.9e-24 Score=243.04 Aligned_cols=327 Identities=18% Similarity=0.179 Sum_probs=216.4
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
+||.......|+++|.++| |+|+++|+... . ..+ .....|+++++++..+.. ....
T Consensus 10 ~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~---~------~~~------------~~~~~g~~~~~i~~~~~~-~~~~ 65 (348)
T TIGR01133 10 TGGHIFPALAVAEELIKRG--VEVLWLGTKRG---L------EKR------------LVPKAGIEFYFIPVGGLR-RKGS 65 (348)
T ss_pred cHHHHhHHHHHHHHHHhCC--CEEEEEeCCCc---c------hhc------------ccccCCCceEEEeccCcC-CCCh
Confidence 4566665579999999999 99999986211 0 000 001247888888764421 1111
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQ 349 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~ 349 (1067)
...+.....+ +..+.++.+.+.+ .+||+||+|.......+.++++..++|+|++.|.....
T Consensus 66 ~~~l~~~~~~----~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~-------- 126 (348)
T TIGR01133 66 FRLIKTPLKL----LKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVPG-------- 126 (348)
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCcc--------
Confidence 1111111111 1222222223332 57999999987666666777788899998655432110
Q ss_pred CCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC
Q 001492 350 GRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429 (1067)
Q Consensus 350 g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn 429 (1067)
. .+++..+.+|.+++.++...+.+ +..+|||
T Consensus 127 -------------~-----~~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i~n 157 (348)
T TIGR01133 127 -------------L-----TNKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLVGN 157 (348)
T ss_pred -------------H-----HHHHHHHHhCeeEECchhHhhcC-------------------------------CceEEcC
Confidence 0 02334678999999998654321 3479999
Q ss_pred CCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccc
Q 001492 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITT-LLKAFGECRPL 508 (1067)
Q Consensus 430 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l 508 (1067)
|+|...+.+... ...+..+++.++|+++|+....|++.. +++|+..+..
T Consensus 158 ~v~~~~~~~~~~-----------------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~- 207 (348)
T TIGR01133 158 PVRQEIRSLPVP-----------------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE- 207 (348)
T ss_pred CcCHHHhcccch-----------------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh-
Confidence 998765532210 012233457788999998888888655 5588887742
Q ss_pred cCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHH
Q 001492 509 RELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLT 588 (1067)
Q Consensus 509 ~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfglt 588 (1067)
....+.+++|+++ ...+.+.+.++++...|.|. ..+++++|..| |++|.++ | +++
T Consensus 208 -~~~~~~~~~g~~~------------~~~l~~~~~~~~l~~~v~~~----~~~~~~~l~~a----d~~v~~~---g-~~~ 262 (348)
T TIGR01133 208 -KGIQIVHQTGKND------------LEKVKNVYQELGIEAIVTFI----DENMAAAYAAA----DLVISRA---G-AST 262 (348)
T ss_pred -cCcEEEEECCcch------------HHHHHHHHhhCCceEEecCc----ccCHHHHHHhC----CEEEECC---C-hhH
Confidence 2233434455543 23455667777776556665 23899999999 9999864 2 789
Q ss_pred HHHHHHcCCCEEEcCCCC-------chhhhccCCceEEeCCCC--HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHH
Q 001492 589 LIEAAAHGLPMVATKNGG-------PVDIHRALNNGLLVDPHD--QQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWP 659 (1067)
Q Consensus 589 llEAmA~G~PVVat~~Gg-------~~eiv~~~~~Gllv~p~d--~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~ 659 (1067)
++|||++|+|||++..++ ..+++.++.+|+++++.| +++++++|.++++|++.+++|++++++.+..+.-+
T Consensus 263 l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~ 342 (348)
T TIGR01133 263 VAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAK 342 (348)
T ss_pred HHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHH
Confidence 999999999999998754 235788889999999876 99999999999999999999999998877666655
Q ss_pred HHHH
Q 001492 660 EHCR 663 (1067)
Q Consensus 660 ~~a~ 663 (1067)
++++
T Consensus 343 ~i~~ 346 (348)
T TIGR01133 343 RIAE 346 (348)
T ss_pred HHHh
Confidence 5553
No 97
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.92 E-value=7.8e-24 Score=235.41 Aligned_cols=249 Identities=13% Similarity=0.121 Sum_probs=154.0
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++|+++| + .|+|||||++..+..+++.+++. +++||.||+.|++..
T Consensus 6 li~~DlDGTLl~~~~~~~~~~~~ai~~l~~~G----i-~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~~~ 76 (273)
T PRK00192 6 LVFTDLDGTLLDHHTYSYEPAKPALKALKEKG----I-PVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYIPK 76 (273)
T ss_pred EEEEcCcccCcCCCCcCcHHHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEecc
Confidence 55669999999877788899999999999997 7 89999999999999999998874 479999999998753
Q ss_pred CCccc--CCcCCCChhhhhccccccccchhHHHHHhhhhcc---cCCCCCCC------CCCC-cc--cccccCCceEEEE
Q 001492 859 TYTEE--GGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTT---EGGENSKN------SSSP-IQ--EDQKSSNAHCISY 924 (1067)
Q Consensus 859 ~~~~~--~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~---~~~~~~~~------~~~~-~~--~~~~~~~~~ki~~ 924 (1067)
..... +.....+..|. .......+.+.+.+..+.... ........ .... .. .........++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T PRK00192 77 NYFPFQPDGERLKGDYWV--IELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFL 154 (273)
T ss_pred cccccCCccccccCCceE--EEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCcee
Confidence 21000 00000000000 000111122222221111100 00000000 0000 00 0000001111111
Q ss_pred EecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCc-ccEEEEecCCCCCChhhhh
Q 001492 925 LIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNV-ANMFVILGESGDTDYEELI 1003 (1067)
Q Consensus 925 ~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~-e~vva~fGDs~N~D~~eML 1003 (1067)
.... ....+.+.+.+...+ +.++.+ + .++||+|.+ |||.|+++|++++|+++ +++++ |||+.| | ++||
T Consensus 155 ~~~~---~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~-~GDs~N-D-i~m~ 223 (273)
T PRK00192 155 WNGS---EAAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIA-LGDSPN-D-LPML 223 (273)
T ss_pred ecCc---hHHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEE-EcCChh-h-HHHH
Confidence 1211 123456666665433 444443 4 599999999 99999999999999999 99999 999999 9 9999
Q ss_pred cCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhh
Q 001492 1004 SGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 1004 ~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
+.+|++|||+||.+..++.+..+. -...++|.+...|||+.+|+++
T Consensus 224 ~~ag~~vam~NA~~~~k~~~~~~a-----------~~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 224 EAADIAVVVPGPDGPNPPLLPGIA-----------DGEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred HhCCeeEEeCCCCCCCcccCcccc-----------CCceEEecCCCcHHHHHHHHHH
Confidence 999999999999954432111110 0234555888999999999984
No 98
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.91 E-value=1.7e-23 Score=242.67 Aligned_cols=363 Identities=14% Similarity=0.126 Sum_probs=254.7
Q ss_pred CeEEEeccCCCCc-----cCcccccccchhHHHH----------HHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCch
Q 001492 252 GAYIIRIPFGPRD-----KYLRKELLWPYIQEFV----------DGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA 316 (1067)
Q Consensus 252 gv~i~ri~~~~~~-----~~l~k~~l~~~l~~f~----------~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a 316 (1067)
++...+++..+.. ....+..+||.+..+. .........++.++.+.... -|+|-.|+.-.
T Consensus 60 ~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-----~D~VWVHDYhL 134 (474)
T PRK10117 60 NITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADKLLPLLKD-----DDIIWIHDYHL 134 (474)
T ss_pred CceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEEEEeccHh
Confidence 4556666554321 1233556777654321 22223334455555554432 48999998755
Q ss_pred hHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhc
Q 001492 317 GDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLY 395 (1067)
Q Consensus 317 ~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y 395 (1067)
..++..+.+. ...++-|..|..++..- ++.. ++. .-.+ -..+-.||.|-..|....+.+....
T Consensus 135 ~llp~~LR~~~~~~~IgFFlHiPFPs~e--ifr~--LP~-----r~ei-------l~glL~aDlIGFqt~~y~rnFl~~~ 198 (474)
T PRK10117 135 LPFASELRKRGVNNRIGFFLHIPFPTPE--IFNA--LPP-----HDEL-------LEQLCDYDLLGFQTENDRLAFLDCL 198 (474)
T ss_pred hHHHHHHHHhCCCCcEEEEEeCCCCChH--HHhh--CCC-----hHHH-------HHHHHhCccceeCCHHHHHHHHHHH
Confidence 5555565543 45789999998766441 1100 010 1112 2246789999999999888775532
Q ss_pred CCCchHHHHHHHHHHhc--CcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhh
Q 001492 396 DGFDVKLEKVLRARARR--GVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMR 473 (1067)
Q Consensus 396 ~~~~~~l~~~l~~~~~~--Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1067)
.+.|+.+... .+...|+.. ++.++|.|||++.|......+ ... ....++.
T Consensus 199 -------~~~lg~~~~~~~~v~~~gr~v-~v~~~PigID~~~~~~~a~~~-~~~-------------------~~~~lr~ 250 (474)
T PRK10117 199 -------SNLTRVTTRSGKSHTAWGKAF-RTEVYPIGIEPDEIAKQAAGP-LPP-------------------KLAQLKA 250 (474)
T ss_pred -------HHHcCCcccCCCeEEECCeEE-EEEEEECeEcHHHHHHHhhch-HHH-------------------HHHHHHH
Confidence 2223222211 223334444 799999999999987544211 111 1112222
Q ss_pred hccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EEE---EEecC---CChhhhhccchHHHHHHHHHHH
Q 001492 474 FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTL---IMGNR---DDIEEMSSGNASVLITVLKLID 543 (1067)
Q Consensus 474 ~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~l---IvG~~---~~~~~l~~~~~~~~~~i~~l~~ 543 (1067)
. ..++++|+.++|+|+.|||...++||+.+ |..+|. +++ .+.++ ++|++++.+..+.+++||..+.
T Consensus 251 ~--~~~~~lilgVDRLDytKGi~~rl~Afe~f--L~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg 326 (474)
T PRK10117 251 E--LKNVQNIFSVERLDYSKGLPERFLAYEAL--LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYG 326 (474)
T ss_pred H--cCCCeEEEEecccccccCHHHHHHHHHHH--HHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccC
Confidence 2 14678999999999999999999999998 456664 222 33444 5677888888999999999999
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc------CCCEEEcCCCCchhhhccCCce
Q 001492 544 KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH------GLPMVATKNGGPVDIHRALNNG 617 (1067)
Q Consensus 544 ~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~------G~PVVat~~Gg~~eiv~~~~~G 617 (1067)
+.+|.+..++...++++++.++|+.| ||++++|+.+||+|+.+||+|| |+.|+|..+|+..++ ..+
T Consensus 327 ~~~w~Pv~y~~~~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L----~~A 398 (474)
T PRK10117 327 QLGWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----TSA 398 (474)
T ss_pred CCCceeEEEecCCCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCCCCccEEEecccchHHHh----CCC
Confidence 99999999899999999999999999 9999999999999999999999 778999999998888 359
Q ss_pred EEeCCCCHHHHHHHHHHhhcCHHHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHHHhHhc
Q 001492 618 LLVDPHDQQAIADALLKLVSEKNLWVECR-KNGWKNIHLFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~ll~d~~~~~~~~-~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 675 (1067)
++|||+|.+++|+||.++|++|...++.+ +..++.+..++...|++.|++.+..+..+
T Consensus 399 llVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 399 LIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred eEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999865555444 44455568999999999999999887544
No 99
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.3e-21 Score=236.76 Aligned_cols=525 Identities=15% Similarity=0.135 Sum_probs=353.1
Q ss_pred ceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCC
Q 001492 306 PYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITST 384 (1067)
Q Consensus 306 pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S 384 (1067)
-|+|-.|......+...+... ..+.+-+..|+..+.. +.+ +..-....--..+.+++.+-..+
T Consensus 141 ~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpss-Ei~---------------r~lp~r~eIl~gll~~~~i~f~t 204 (732)
T KOG1050|consen 141 GDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSS-EIY---------------RCLPVRKEILRGLLYDDLLGFHT 204 (732)
T ss_pred CCcEEEEcchhhccchhhhcccccceEEEeccCCCChH-HHH---------------HhcccHHHHHHhhhccCcccccc
Confidence 466555554322222233333 4566668888765432 111 11111001123467778877777
Q ss_pred HHHHHHHHhhcCCCchHHHHHHHHHHh-----cCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCC
Q 001492 385 KQEIDEQWGLYDGFDVKLEKVLRARAR-----RGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGS 459 (1067)
Q Consensus 385 ~~~~~~~~~~y~~~~~~l~~~l~~~~~-----~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 459 (1067)
.+....+... -.|.|..... .||+..|+.. .+..+|.|+|..+|......+
T Consensus 205 ~d~arhFls~-------c~R~l~~~~~s~~~~~~v~~rgr~~-~v~~~pigid~~r~v~~~~~~---------------- 260 (732)
T KOG1050|consen 205 DDYARHFLST-------CSRLLGLEVASKFPTAGVSGRGRDV-SVKALPIGIDVQRFVKLLELP---------------- 260 (732)
T ss_pred ccHHHHHHHH-------HHHHHHhhhhccCCcceEEecccee-eeeecccccchHHhhccccch----------------
Confidence 7666554332 2334444433 3566666555 789999999999998765322
Q ss_pred CCCCcchhhHhhhhhccC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EEE---EEec---CCChhhhh
Q 001492 460 SPKAIPAIWSDVMRFLTN-PHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LTL---IMGN---RDDIEEMS 528 (1067)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~l---IvG~---~~~~~~l~ 528 (1067)
...+..+.+... .++.+|+.++|++..||+..-+.||+++ +.++|. +.+ ..+. +.++++++
T Consensus 261 ------~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~--L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k 332 (732)
T KOG1050|consen 261 ------YVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQF--LEEYPEWIDKVVLIQIENPKRTDGKEVEELK 332 (732)
T ss_pred ------hHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHH--HHhChhhhceEEEEEEecCCcccchHHHHHH
Confidence 222223333222 4788999999999999999999999999 456664 222 2222 33455677
Q ss_pred ccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc--C--CCEEE-cC
Q 001492 529 SGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH--G--LPMVA-TK 603 (1067)
Q Consensus 529 ~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~--G--~PVVa-t~ 603 (1067)
......+.+|++........+.+.+...++..++.++|..| |++++.++.+|++++.+|+.+| + .+.|. ..
T Consensus 333 ~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef 408 (732)
T KOG1050|consen 333 FCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEF 408 (732)
T ss_pred HHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhhhHHHHhhcccCCceEEeee
Confidence 77777888888888888877777889999999999999999 9999999999999999999999 2 44444 44
Q ss_pred CCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHHhHhcCCCCCCC
Q 001492 604 NGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGW-KNIHLFSWPEHCRTYLTRVAACRMRHPQWQTD 682 (1067)
Q Consensus 604 ~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~-~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~ 682 (1067)
.|. .+..+ ...++++|+|.++++.+|..++++++...+++..-. +.+..++...|+..++..+.++-.... ...+
T Consensus 409 ~G~-~~tl~--d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~-~~~~ 484 (732)
T KOG1050|consen 409 IGD-DTTLE--DAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGF-LGFR 484 (732)
T ss_pred ccc-ccccc--ccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhcc-cccc
Confidence 554 44533 457899999999999999999998776665554433 334577888888888884444432221 1000
Q ss_pred CcchhhhhhhcccccchhhhhhhccccccCCCCCCCCCCCcccccCCCCchhhHHHHHHhhccCCCCCCcchHHHHhhhh
Q 001492 683 TPVDEMAAEESSFNDSLKDVQDMSLRLSVDGDKSSLNGSLDYTAASSGDPVQDQVKRVLSKIKKPDSDSNDKEAEKKLLE 762 (1067)
Q Consensus 683 ~~~~~~~~~~~~~~~sl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1067)
. . | .-..+.+++.|+++++
T Consensus 485 ~----------------------~-------------------------~-~l~~~~~i~~y~~s~~------------- 503 (732)
T KOG1050|consen 485 V----------------------T-------------------------P-LLTAEHIVSDYKKSKK------------- 503 (732)
T ss_pred c----------------------c-------------------------c-ccChhHhhhhhhhccc-------------
Confidence 0 0 0 0223567888988877
Q ss_pred cccccCcccccCCeEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHh-cCCCCC
Q 001492 763 NVVSKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNS-MKIEAN 841 (1067)
Q Consensus 763 ~~~~~~~~~~~r~klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~-l~i~~~ 841 (1067)
|+|++ |.|||+..+.... +...|+.|..++ +++ |.|+|||....+..++.. .++
T Consensus 504 -------------rli~l--dyd~t~~~~~~~~---~~~~l~~L~~dp--~n~--v~i~s~~~r~~l~~~~~~~~~l--- 558 (732)
T KOG1050|consen 504 -------------RLILL--DYDLTLIPPRSIK---AISILKDLCSDP--KNI--VYIVSGRGRSVLEKWFFGCKNL--- 558 (732)
T ss_pred -------------eEEEe--cccccccCCCCch---HHHHHHHHhcCC--CCe--EEEEEccCchhhhhhccccccc---
Confidence 88888 5558855543222 778889999886 445 999999999999777633 222
Q ss_pred CCCEEEEcCCceEEecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceE
Q 001492 842 EFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHC 921 (1067)
Q Consensus 842 ~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 921 (1067)
++++.||..+..++.|.. .. .+.+|...+ .+..+.+.+++++++.+.+ ...
T Consensus 559 ---gl~aEhG~f~r~~~~w~~---~~-~~~~w~~~v-----~~i~~~~~ert~GS~ie~k-----------------~~~ 609 (732)
T KOG1050|consen 559 ---GLAAEHGYFVRIPGKWET---CV-LDLDWKDLV-----KDIFQYYTERTPGSYIERK-----------------ETA 609 (732)
T ss_pred ---eeecccCceeccCCceee---ec-ccccHHHHH-----HHHHHHHHhcCCCceeccc-----------------Cce
Confidence 688899999887765433 11 567777665 4567778888999888876 345
Q ss_pred EEEEecCCC---chHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCC
Q 001492 922 ISYLIKDPS---KARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTD 998 (1067)
Q Consensus 922 i~~~~~~~~---~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D 998 (1067)
+.|++.+.+ ..-...++.++|......++++.-. ..+||-|.|+|||.|...+...+.-+++.+++ +||... |
T Consensus 610 l~~hy~~ad~~~g~~qA~el~~~l~~~~~~~~v~~g~--~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c-~g~d~t-D 685 (732)
T KOG1050|consen 610 LVWHYRNADPEFGELQAKELLEHLESKNEPVEVVRGK--HIVEVRPQGVSKGLAAERILSEMVKEPDFVLC-IGDDRT-D 685 (732)
T ss_pred EEEeeeccCcchhHHHHHHHHHHhcccCCCeEEEecC--ceEEEcccccchHHHHHHHHHhcCCCcceEEE-ecCCCC-h
Confidence 677775543 2334567777776533345444433 48999999999999999999999844456666 999666 9
Q ss_pred hhhhhcCC
Q 001492 999 YEELISGA 1006 (1067)
Q Consensus 999 ~~eML~~a 1006 (1067)
++||...
T Consensus 686 -ed~~~~~ 692 (732)
T KOG1050|consen 686 -EDMFEFI 692 (732)
T ss_pred -HHHHHHH
Confidence 9999854
No 100
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.89 E-value=2.1e-21 Score=229.91 Aligned_cols=284 Identities=17% Similarity=0.200 Sum_probs=192.2
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||+||++...........++..|+|+|++.|.+....+. .|+...++ ++..++.+|.|++.
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~~---------------~~~~~~~~--~r~~~~~~d~ii~~ 185 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSFK---------------RYQKFKRF--YRLLFKNIDLVLAQ 185 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhHH---------------HHHHHHHH--HHHHHHhCCEEEEC
Confidence 56999998854333333344567899999887755322211 11111121 34568899999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+.. .|+ +.. +.++||+ +++.+.+...
T Consensus 186 S~~~~~~l~~------------------~g~-----~~~-i~vi~n~-~~d~~~~~~~---------------------- 218 (425)
T PRK05749 186 SEEDAERFLA------------------LGA-----KNE-VTVTGNL-KFDIEVPPEL---------------------- 218 (425)
T ss_pred CHHHHHHHHH------------------cCC-----CCC-cEecccc-cccCCCChhh----------------------
Confidence 9987776532 122 223 7888874 4433321110
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
.......+..+. +++++|+++|+. .|+...+++|+..+. +..|++.+ |+|.+++. ..++.+++
T Consensus 219 ~~~~~~~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~--~~~~~~~liivG~g~~r----------~~~l~~~~ 282 (425)
T PRK05749 219 AARAATLRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALL--KQFPNLLLILVPRHPER----------FKEVEELL 282 (425)
T ss_pred HHHHHHHHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHH--HhCCCcEEEEcCCChhh----------HHHHHHHH
Confidence 000111122232 567888888874 688999999999884 34577765 77877632 24566777
Q ss_pred HhcCCCCcEEeCCCCC------------CCCHHHHHHHhhcCCcEEEe-cCCCCCCCHHHHHHHHcCCCEEEcCC-CCch
Q 001492 543 DKYDLYGQVAYPKHHK------------QYDVPEIYRLAAKTKGVFIN-PALVEPFGLTLIEAAAHGLPMVATKN-GGPV 608 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~~------------~~dl~~ly~~A~~~~dV~v~-ps~~EgfgltllEAmA~G~PVVat~~-Gg~~ 608 (1067)
.++++. .+.|.+... ..+++.+|+.| |++++ +|+.|++|++++||||||+|||++.. ++..
T Consensus 283 ~~~gl~-~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~ 357 (425)
T PRK05749 283 KKAGLS-YVRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFK 357 (425)
T ss_pred HhCCCc-EEEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHH
Confidence 887775 244444211 35899999999 99655 67889999999999999999999875 5666
Q ss_pred hhhccC-CceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Q 001492 609 DIHRAL-NNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 609 eiv~~~-~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
++++.. .+|+++.+.|+++++++|.++++|++.+++|++++++.++.. ....+++++.|...+.
T Consensus 358 e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 358 EIFERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYLP 422 (425)
T ss_pred HHHHHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhcc
Confidence 665542 468888899999999999999999999999999999998533 3566777777766543
No 101
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.89 E-value=3.9e-22 Score=220.07 Aligned_cols=198 Identities=10% Similarity=0.041 Sum_probs=134.8
Q ss_pred EEEEeCCCCCCCC-----chhhHHHHHHHHHHHHh-cCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCc
Q 001492 779 VIALDCYDSKGAP-----DKKMIQIMYDVFKAVRL-DHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGG 852 (1067)
Q Consensus 779 lia~DiDGTLl~~-----~~~i~~~~~~al~~l~~-~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa 852 (1067)
+|++|+||||++. ++.+++.++++|++|++ .| + .|+|+|||++..+.++++.+++ .+||+||+
T Consensus 16 li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g----~-~v~i~SGR~~~~~~~~~~~~~~------~~i~~nGa 84 (266)
T PRK10187 16 AWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATAND----G-ALALISGRSMVELDALAKPYRF------PLAGVHGA 84 (266)
T ss_pred EEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCC----C-cEEEEeCCCHHHHHHhcCcccc------eEEEeCCC
Confidence 4556999998873 56899999999999998 44 6 7999999999999999987554 48999999
Q ss_pred eEEecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCC-c
Q 001492 853 EMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPS-K 931 (1067)
Q Consensus 853 ~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~-~ 931 (1067)
+++...+... ....+..+...+ ...++..+.+.++...+.+ ...+++++.... .
T Consensus 85 ~i~~~~~~~~---~~~l~~~~~~~i-----~~~l~~~~~~~pg~~ve~k-----------------~~~~~~h~r~~~~~ 139 (266)
T PRK10187 85 ERRDINGKTH---IVHLPDAIARDI-----SVQLHTALAQLPGAELEAK-----------------GMAFALHYRQAPQH 139 (266)
T ss_pred eeecCCCCee---eccCChhHHHHH-----HHHHHHHhccCCCcEEEeC-----------------CcEEEEECCCCCcc
Confidence 9986531110 001111111111 0112222223333333332 233445553332 2
Q ss_pred hHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCC----c
Q 001492 932 ARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA----H 1007 (1067)
Q Consensus 932 ~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~a----g 1007 (1067)
...+.++.+.+......+ .+.+.+ .++||.|.++|||.||++|++++|++.+++++ |||+.| | ++||+.+ |
T Consensus 140 ~~~~~~l~~~i~~~~~~~-~~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~-~GD~~n-D-~~mf~~~~~~~g 214 (266)
T PRK10187 140 EDALLALAQRITQIWPQL-ALQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF-VGDDLT-D-EAGFAVVNRLGG 214 (266)
T ss_pred HHHHHHHHHHHHhhCCce-EEeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE-EcCCcc-H-HHHHHHHHhcCC
Confidence 233445554544332222 334444 59999999999999999999999999999988 999999 9 9999998 9
Q ss_pred eEEEeCCCcc
Q 001492 1008 KTLIMKGVVE 1017 (1067)
Q Consensus 1008 ~gVaMgNA~e 1017 (1067)
+||+||||.+
T Consensus 215 ~~vavg~a~~ 224 (266)
T PRK10187 215 ISVKVGTGAT 224 (266)
T ss_pred eEEEECCCCC
Confidence 9999999983
No 102
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.88 E-value=1.8e-20 Score=218.71 Aligned_cols=263 Identities=13% Similarity=0.099 Sum_probs=180.0
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||+||++++......+..+...++|++.+.++++... .+..+.+|.++++
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~----------------------------~~~~~~ad~i~~~ 154 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK----------------------------IWVHREVDRYFVA 154 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc----------------------------ccccCCCCEEEEC
Confidence 579999999876544444444556799887666542111 1246789999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+.+ .|+ +..++.++++.++.. |.+...
T Consensus 155 s~~~~~~l~~------------------~gi-----~~~ki~v~G~p~~~~-f~~~~~---------------------- 188 (380)
T PRK13609 155 TDHVKKVLVD------------------IGV-----PPEQVVETGIPIRSS-FELKIN---------------------- 188 (380)
T ss_pred CHHHHHHHHH------------------cCC-----ChhHEEEECcccChH-HcCcCC----------------------
Confidence 9977665532 122 223788876655432 221110
Q ss_pred cchhhHhhhhhccCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPM-ILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKL 541 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l 541 (1067)
....+.++...+++++ +++.|++...||+..+++++.+. +++.+ ++|++. .....++.++
T Consensus 189 ---~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~------~~~~~viv~G~~---------~~~~~~l~~~ 250 (380)
T PRK13609 189 ---PDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV------PDLQVVVVCGKN---------EALKQSLEDL 250 (380)
T ss_pred ---HHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC------CCcEEEEEeCCC---------HHHHHHHHHH
Confidence 0112234444556665 45568888889999999988643 34443 443322 1123455555
Q ss_pred HHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC-CCCc----hhhhccCCc
Q 001492 542 IDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK-NGGP----VDIHRALNN 616 (1067)
Q Consensus 542 ~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~-~Gg~----~eiv~~~~~ 616 (1067)
+..++ ++|.|+|++ ++++++|+.| |++|. ++.|++++||||||+|||+++ .+|. .+++. .+
T Consensus 251 ~~~~~--~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~ 316 (380)
T PRK13609 251 QETNP--DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RK 316 (380)
T ss_pred HhcCC--CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hC
Confidence 55554 589999996 5799999999 99884 567999999999999999986 5542 12333 24
Q ss_pred eEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 001492 617 GLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 672 (1067)
|+.+.+.|+++++++|.+++++++.+++|++++++....++++.+++.+++.+..+
T Consensus 317 G~~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 317 GAAVVIRDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CcEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 55555679999999999999999999999999988777889999999999887654
No 103
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.88 E-value=9.4e-22 Score=211.87 Aligned_cols=209 Identities=12% Similarity=0.073 Sum_probs=131.1
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+..+++.++++ ..++||+||+.|+...
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~g----i-~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~ 72 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAG----I-PVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEE 72 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCC----C-eEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCc
Confidence 46789999999887656666999999999997 8 89999999999999999998873 1479999999998753
Q ss_pred CCcccCCcCCCChhhhhccccccccchhHHHHHhhhh---cccCCCCCCCC------CCCccc--ccccCCceEEEEEe-
Q 001492 859 TYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMN---TTEGGENSKNS------SSPIQE--DQKSSNAHCISYLI- 926 (1067)
Q Consensus 859 ~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~------~~~~~~--~~~~~~~~ki~~~~- 926 (1067)
.+.. ...-..+...+ ..+.+...+..+.. ........... ...... ........+..+..
T Consensus 73 ~~~~----~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (221)
T TIGR02463 73 LWRE----EPGYPRIILGI----SYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWR 144 (221)
T ss_pred cccc----CCCceEEecCC----CHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEec
Confidence 2110 00000000011 11111111111100 00000000000 000000 00001112222333
Q ss_pred cCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCC
Q 001492 927 KDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA 1006 (1067)
Q Consensus 927 ~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~a 1006 (1067)
.. ....+++.+.+...+ +.++.+ + .++||+|.+++||.|++++++++|++++++++ |||+.| | ++||+.+
T Consensus 145 ~~---~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~-~GD~~N-D-i~ml~~a 214 (221)
T TIGR02463 145 DS---DSRMPRFTALLADLG--LAIVQG-N-RFSHVLGASSSKGKAANWLKATYNQPDVKTLG-LGDGPN-D-LPLLEVA 214 (221)
T ss_pred Cc---hhHHHHHHHHHHHcC--CeEEec-C-CeeEEecCCCCHHHHHHHHHHHhCCCCCcEEE-ECCCHH-H-HHHHHhC
Confidence 21 224456666665543 444443 4 48999999999999999999999999999999 999999 9 9999999
Q ss_pred ceEEEeC
Q 001492 1007 HKTLIMK 1013 (1067)
Q Consensus 1007 g~gVaMg 1013 (1067)
|+|||+.
T Consensus 215 g~~va~~ 221 (221)
T TIGR02463 215 DYAVVIK 221 (221)
T ss_pred CceEEeC
Confidence 9999974
No 104
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.87 E-value=5.2e-22 Score=233.59 Aligned_cols=322 Identities=16% Similarity=0.169 Sum_probs=199.1
Q ss_pred HHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhH
Q 001492 289 NMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRI 367 (1067)
Q Consensus 289 ~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri 367 (1067)
.++.++.+.+. .-|+|-.|+.-...++.++.++ ...++.+..|..++.. +.+ . .++ ..-.++
T Consensus 130 ~FA~~i~~~~~-----~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~-e~f-r--~lP-----~r~eiL--- 192 (474)
T PF00982_consen 130 RFADAIAEVYR-----PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSS-EIF-R--CLP-----WREEIL--- 192 (474)
T ss_dssp HHHHHHGGG-------TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----H-HHH-T--TST-----THHHHH---
T ss_pred HHHHHHHHhCc-----CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCH-HHH-h--hCC-----cHHHHH---
Confidence 34555555544 3589999987555555566554 4688999999876543 111 0 011 111122
Q ss_pred HHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhc---CcccCCCCCCCEEEeCCCCCCCCccCCCCCCc
Q 001492 368 EGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARR---GVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPE 444 (1067)
Q Consensus 368 ~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~---Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~ 444 (1067)
..+-.||.|-..+....+.+... ..+.|+.+... +|...|+.. ++.++|.|||++.|......++
T Consensus 193 ----~glL~aDlIgFqt~~~~~nFl~~-------~~r~lg~~~~~~~~~v~~~Gr~v-~v~~~pigId~~~~~~~~~~~~ 260 (474)
T PF00982_consen 193 ----RGLLGADLIGFQTFEYARNFLSC-------CKRLLGLEVDSDRGTVEYNGRRV-RVGVFPIGIDPDAFAQLARSPE 260 (474)
T ss_dssp ----HHHTTSSEEEESSHHHHHHHHHH-------HHHHS-EEEEETTE-EEETTEEE-EEEE------HHHHHHHHH-S-
T ss_pred ----HHhhcCCEEEEecHHHHHHHHHH-------HHHHcCCcccCCCceEEECCEEE-EEEEeeccCChHHHHhhccChH
Confidence 24678999999999988876543 33444333222 355555554 8999999999998865432233
Q ss_pred cccccccccCCCCCCCCCCcchhhHhhhhhccCCC-CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EE---E
Q 001492 445 VDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPH-KPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LT---L 516 (1067)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~---l 516 (1067)
+...++ .++.. ..+ .++|+.++|+|+.||+...++||+++ |..+|. ++ +
T Consensus 261 v~~~~~-------------------~l~~~--~~~~~~ii~gvDrld~~kGi~~kl~Afe~f--L~~~P~~~~kv~liQi 317 (474)
T PF00982_consen 261 VQERAE-------------------ELREK--FKGKRKIIVGVDRLDYTKGIPEKLRAFERF--LERYPEYRGKVVLIQI 317 (474)
T ss_dssp --HHHH-------------------HHHHH--TTT-SEEEEEE--B-GGG-HHHHHHHHHHH--HHH-GGGTTTEEEEEE
T ss_pred HHHHHH-------------------HHHHh--cCCCcEEEEEeccchhhcCHHHHHHHHHHH--HHhCcCccCcEEEEEE
Confidence 322222 22222 134 58999999999999999999999999 345554 33 3
Q ss_pred EEecCC---ChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHH
Q 001492 517 IMGNRD---DIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAA 593 (1067)
Q Consensus 517 IvG~~~---~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAm 593 (1067)
.+.++. +++++..+..+.+++|+......++.|.+++.+.++.+++.++|+.| ||++++|++|||+|+.+|++
T Consensus 318 ~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyv 393 (474)
T PF00982_consen 318 AVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYV 393 (474)
T ss_dssp --B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHH
T ss_pred eeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEE
Confidence 445554 35678888889999999999999999999999999999999999999 99999999999999999999
Q ss_pred Hc-----CCCEEEcCCCCchhhhccCC-ceEEeCCCCHHHHHHHHHHhhcCHHHHHHH-HHHHHHHHHcCCHHHHHHHHH
Q 001492 594 AH-----GLPMVATKNGGPVDIHRALN-NGLLVDPHDQQAIADALLKLVSEKNLWVEC-RKNGWKNIHLFSWPEHCRTYL 666 (1067)
Q Consensus 594 A~-----G~PVVat~~Gg~~eiv~~~~-~Gllv~p~d~~~la~aL~~ll~d~~~~~~~-~~~~~~~~~~fsw~~~a~~~l 666 (1067)
|| |+.|++..+|+..++ . .+++|||.|++++|+||.++|++|...++. .+..++.+..++...|++.|+
T Consensus 394 a~q~~~~GvLiLSefaGaa~~L----~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l 469 (474)
T PF00982_consen 394 ACQDDNPGVLILSEFAGAAEQL----SEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFL 469 (474)
T ss_dssp HHS-TS--EEEEETTBGGGGT-----TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHH
T ss_pred EEecCCCCceEeeccCCHHHHc----CCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHH
Confidence 99 778899899987776 3 349999999999999999999987654444 445556678999999999999
Q ss_pred HHHH
Q 001492 667 TRVA 670 (1067)
Q Consensus 667 ~~~~ 670 (1067)
+.++
T Consensus 470 ~~L~ 473 (474)
T PF00982_consen 470 RDLK 473 (474)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8775
No 105
>PTZ00174 phosphomannomutase; Provisional
Probab=99.87 E-value=1.3e-21 Score=214.11 Aligned_cols=211 Identities=16% Similarity=0.134 Sum_probs=127.4
Q ss_pred EEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEec
Q 001492 778 IVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 778 llia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~ 857 (1067)
-+|++|+||||+++++++++.++++|++++++| + .|+|||||++..+.+.++..... ..+++||+||+.|+..
T Consensus 6 klia~DlDGTLL~~~~~is~~~~~ai~~l~~~G----i-~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 6 TILLFDVDGTLTKPRNPITQEMKDTLAKLKSKG----F-KIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAYKD 78 (247)
T ss_pred eEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEEEC
Confidence 367779999999998999999999999999997 7 89999999999998888753321 2467999999999864
Q ss_pred CCCcccCCcCCCChhhhhccccccccchhHHHHHhhh----hcccCCCCCCCCCCCcccccccCCceEEEEEecC-----
Q 001492 858 GTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLM----NTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKD----- 928 (1067)
Q Consensus 858 ~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~----- 928 (1067)
+ ... +...+......+.+.+.+.... ....... ......... ....+......
T Consensus 79 ~-~~i----------~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~ 140 (247)
T PTZ00174 79 G-ELF----------HSQSILKFLGEEKLKKFINFCLRYIADLDIPVK-----RGTFIEYRN--GMINISPIGRNCSQEE 140 (247)
T ss_pred C-eEE----------EEEcchhcCCHHHHHHHHHHHHHHHHhcCCccc-----eeeeEEcCC--ceEEeccccccCCHHH
Confidence 2 111 1111100001111122111110 0000000 000000000 00000000000
Q ss_pred -------CCchHHHHHHHHHHHhcCCcEEEEEeeC-CeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCC
Q 001492 929 -------PSKARRIDDLRQKLRMRGLRCHPMYCRN-STRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGE----SGD 996 (1067)
Q Consensus 929 -------~~~~~~~~el~~~L~~~~~~~~v~~s~~-~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGD----s~N 996 (1067)
........++.+.+......+.+.++.+ ..++||+|+++|||.||++|+++ ++++|| ||| ++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~evia-fGD~~~~~~N 215 (247)
T PTZ00174 141 RDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHF-FGDKTFEGGN 215 (247)
T ss_pred HHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEE-EcccCCCCCC
Confidence 0001123455555644323345555653 24899999999999999999998 589999 999 999
Q ss_pred CChhhhhcCC-ceEEEeCCCcccch
Q 001492 997 TDYEELISGA-HKTLIMKGVVEKGS 1020 (1067)
Q Consensus 997 ~D~~eML~~a-g~gVaMgNA~e~~~ 1020 (1067)
| ++||+.+ -.|+.++||.+..+
T Consensus 216 -D-ieMl~~~~~~g~~v~n~~~~~~ 238 (247)
T PTZ00174 216 -D-YEIYNDPRTIGHSVKNPEDTIK 238 (247)
T ss_pred -c-HhhhhcCCCceEEeCCHHHHHH
Confidence 9 9999965 34566669995444
No 106
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.87 E-value=7e-21 Score=219.51 Aligned_cols=313 Identities=17% Similarity=0.199 Sum_probs=233.4
Q ss_pred ceEEEEcCCchhHHHHHHHhcC-CCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCC
Q 001492 306 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITST 384 (1067)
Q Consensus 306 pDvIh~h~~~a~~~a~~l~~~~-giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S 384 (1067)
=|+|-.|+.....+...+..+. ..++.|+.|-.++..- + ++.+-+.+.--..+-.||.|-..+
T Consensus 148 gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssE--v--------------fr~lP~r~eIl~gll~~dligFqt 211 (486)
T COG0380 148 GDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSE--V--------------FRCLPWREEILEGLLGADLIGFQT 211 (486)
T ss_pred CCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHH--H--------------HhhCchHHHHHHHhhcCCeeEecC
Confidence 3899999875556666665544 4678899998766431 1 111111111123467899999999
Q ss_pred HHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCC--CCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 385 KQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHG--RYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 385 ~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g--~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
+...+.+..... +.++.....++..-| ....++..+|.|||+..|.....++.++..
T Consensus 212 ~~y~~nF~~~~~-------r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~-------------- 270 (486)
T COG0380 212 ESYARNFLDLCS-------RLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEK-------------- 270 (486)
T ss_pred HHHHHHHHHHHH-------HhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhH--------------
Confidence 998887765533 233211112222221 233489999999999999866543333222
Q ss_pred CcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc----EE---EEEecCCChh---hhhccch
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELAN----LT---LIMGNRDDIE---EMSSGNA 532 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~---lIvG~~~~~~---~l~~~~~ 532 (1067)
+.++.+... .++++|+.++|+|+.||+...+.||++| |..+|. ++ +..+++.+.+ .+..+..
T Consensus 271 -----~~el~~~~~-~~~kiivgvDRlDy~kGi~~rl~Afe~l--L~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~ 342 (486)
T COG0380 271 -----VLELKAELG-RNKKLIVGVDRLDYSKGIPQRLLAFERL--LEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIE 342 (486)
T ss_pred -----HHHHHHHhc-CCceEEEEehhcccccCcHHHHHHHHHH--HHhChhhhCceEEEEecCCCccccHHHHHHHHHHH
Confidence 333333332 3388999999999999999999999999 466665 22 3445555444 5778888
Q ss_pred HHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCCEEEcCCCCc
Q 001492 533 SVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH-----GLPMVATKNGGP 607 (1067)
Q Consensus 533 ~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~-----G~PVVat~~Gg~ 607 (1067)
+.+++|+..++..++.|..+|+..++++++.++|+.| |+++++|++|||+||..|+.|| |..|++..+|+.
T Consensus 343 ~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~a----Dv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa 418 (486)
T COG0380 343 ELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAA----DVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAA 418 (486)
T ss_pred HHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhh----ceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccch
Confidence 9999999999999999999999999999999999999 9999999999999999999999 899999999999
Q ss_pred hhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHHHHH
Q 001492 608 VDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKN-GWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 608 ~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~-~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
.++ ..+++|||+|.+++|++|.++|+++...++.+.. .++.+..++...|+..|++.+..
T Consensus 419 ~~L----~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 419 SEL----RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred hhh----ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 988 4599999999999999999999977655555544 44556899999999999998876
No 107
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.87 E-value=8.1e-21 Score=225.25 Aligned_cols=255 Identities=14% Similarity=0.202 Sum_probs=162.9
Q ss_pred ccCcccccCCeEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCE
Q 001492 766 SKYPMLRRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDA 845 (1067)
Q Consensus 766 ~~~~~~~~r~klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~ 845 (1067)
+..|.-...+| +|++|+||||+++++.+++.++++|++++++| + .|+|||||++..+..+++++++ .++
T Consensus 407 ~~~~~~~~~~K--LIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekG----I-~~VIATGRs~~~i~~l~~~Lgl----~~~ 475 (694)
T PRK14502 407 SRLPSSGQFKK--IVYTDLDGTLLNPLTYSYSTALDALRLLKDKE----L-PLVFCSAKTMGEQDLYRNELGI----KDP 475 (694)
T ss_pred ccCCCcCceee--EEEEECcCCCcCCCCccCHHHHHHHHHHHHcC----C-eEEEEeCCCHHHHHHHHHHcCC----CCe
Confidence 44444344456 45559999999987778789999999999997 8 8999999999999999999887 358
Q ss_pred EEEcCCceEEecCCCcccCCcCCCChhhhh--ccccccccchhHHHHHhhhhccc--------CCC--CCCCCCCCcc--
Q 001492 846 LICSSGGEMYYPGTYTEEGGKLFPDPDYAS--HIDYRWGCDGLKKTIWKLMNTTE--------GGE--NSKNSSSPIQ-- 911 (1067)
Q Consensus 846 ~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~--~i~~~~~~~~l~~~l~~~~~~~~--------~~~--~~~~~~~~~~-- 911 (1067)
+||+||+.|+.+.+... .....+..... .....+..+.++..+..+..... ... .....+....
T Consensus 476 ~I~eNGA~I~~~~~~~~--~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei 553 (694)
T PRK14502 476 FITENGGAIFIPKDYFR--LPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDV 553 (694)
T ss_pred EEEcCCCEEEECCCccc--ccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHH
Confidence 99999999998653110 00000000000 01111222333333322211100 000 0000000000
Q ss_pred -----------cccc-cCCceEEEEEecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHH
Q 001492 912 -----------EDQK-SSNAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVR 979 (1067)
Q Consensus 912 -----------~~~~-~~~~~ki~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~ 979 (1067)
.... .....++.+. .+ ...++++.+.+...+ +++.. +.+++||+ .++|||+||++|+++
T Consensus 554 ~~~TgL~~~~a~~a~~Re~seKIl~~-gd---~e~Leel~~~L~~~~--l~v~~--g~rfleI~-~gvdKG~AL~~L~e~ 624 (694)
T PRK14502 554 SRLTDLNLKQAELAKQREYSETVHIE-GD---KRSTNIVLNHIQQSG--LEYSF--GGRFYEVT-GGNDKGKAIKILNEL 624 (694)
T ss_pred HHhhCCCHHHHHHHhhccCceeEEEc-CC---HHHHHHHHHHHHHcC--cEEEE--CCEEEEeC-CCCCHHHHHHHHHHH
Confidence 0000 1122344333 21 235678888887663 44444 44699999 599999999999999
Q ss_pred hCCCcccEEEEe--cCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHH
Q 001492 980 WRLNVANMFVIL--GESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057 (1067)
Q Consensus 980 ~gi~~e~vva~f--GDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al 1057 (1067)
+|++.+++++ | ||+.| | ++||+.+++||||++-....+.+ ..++.. .|+.....|-..|+
T Consensus 625 ~gI~~~eVia-falGDs~N-D-isMLe~Ag~gVAM~~~~~~~~~l--------------~~~~~~-~~~~~GP~GW~eai 686 (694)
T PRK14502 625 FRLNFGNIHT-FGLGDSEN-D-YSMLETVDSPILVQRPGNKWHKM--------------RLRNPS-YVKGVGPEGFSRAV 686 (694)
T ss_pred hCCCccceEE-EEcCCcHh-h-HHHHHhCCceEEEcCCCCCCCcc--------------CCCCce-ecCCCCcHHHHHHH
Confidence 9999999999 8 99999 9 99999999999999888444321 233444 55788999998888
Q ss_pred Hhh
Q 001492 1058 RQV 1060 (1067)
Q Consensus 1058 ~~~ 1060 (1067)
.++
T Consensus 687 ~~~ 689 (694)
T PRK14502 687 TDI 689 (694)
T ss_pred HHH
Confidence 775
No 108
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.86 E-value=1.2e-19 Score=211.92 Aligned_cols=264 Identities=13% Similarity=0.033 Sum_probs=184.1
Q ss_pred CCceEEEEcCCc-hh---HHHHHHH--hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccC
Q 001492 304 VWPYVIHGHYAD-AG---DSAALLS--GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAA 377 (1067)
Q Consensus 304 ~~pDvIh~h~~~-a~---~~a~~l~--~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~A 377 (1067)
.+||+||++++. .. ..+..+. ...++|++.++++++... ..+..+.+
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~---------------------------~~w~~~~~ 151 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH---------------------------PTWFHKGV 151 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC---------------------------cccccCCC
Confidence 579999997653 22 2222222 135799998888763110 12246889
Q ss_pred CEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCC
Q 001492 378 ELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTD 457 (1067)
Q Consensus 378 d~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~ 457 (1067)
|.++++|+...+.+... |+ +.+++.+++++++.+.+.+..
T Consensus 152 d~~~~~s~~~~~~l~~~------------------g~-----~~~ki~v~g~~v~~~f~~~~~----------------- 191 (382)
T PLN02605 152 TRCFCPSEEVAKRALKR------------------GL-----EPSQIRVYGLPIRPSFARAVR----------------- 191 (382)
T ss_pred CEEEECCHHHHHHHHHc------------------CC-----CHHHEEEECcccCHhhccCCC-----------------
Confidence 99999998776655332 22 224899999999875443211
Q ss_pred CCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--cCCCc--EEEEEecCCChhhhhccchH
Q 001492 458 GSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL--RELAN--LTLIMGNRDDIEEMSSGNAS 533 (1067)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l--~~~~~--l~lIvG~~~~~~~l~~~~~~ 533 (1067)
.....+.++..++++++|+++||....|++..+++++..+... ...++ +.+++|.++.
T Consensus 192 --------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~---------- 253 (382)
T PLN02605 192 --------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK---------- 253 (382)
T ss_pred --------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------
Confidence 0112234556677889999999999999999999999765210 01233 3346675421
Q ss_pred HHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC------CCc
Q 001492 534 VLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN------GGP 607 (1067)
Q Consensus 534 ~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~------Gg~ 607 (1067)
...++... ....+|.|.|++ ++++++|++| |++|.++ .|+|++||||||+|||+++. |+.
T Consensus 254 ~~~~L~~~----~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~ 319 (382)
T PLN02605 254 LQSKLESR----DWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV 319 (382)
T ss_pred HHHHHHhh----cccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH
Confidence 12223222 223469999996 5899999999 9999864 58999999999999999983 444
Q ss_pred hhhhccCCceEEeCCCCHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 001492 608 VDIHRALNNGLLVDPHDQQAIADALLKLVSE-KNLWVECRKNGWKNIHLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 608 ~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d-~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 669 (1067)
..++ +.+.|+++ .|+++++++|.+++.+ ++.+++|++++++.....+++.+++.+.+..
T Consensus 320 ~~i~-~~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 320 PYVV-DNGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred HHHH-hCCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence 4444 45567655 7999999999999998 9999999999999888888888887776654
No 109
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.86 E-value=8.4e-20 Score=212.47 Aligned_cols=265 Identities=20% Similarity=0.157 Sum_probs=178.5
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
....|++.+.+.+..++.. ..+.++|+.+++.+.... +. ... .. ..|+.+++.||.|+++
T Consensus 101 ~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~~------~~-~~~--------~~--~~e~~~~~~ad~vi~~ 160 (373)
T cd04950 101 FGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAFP------GG-PPE--------LL--EAERRLLKRADLVFTT 160 (373)
T ss_pred CCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhccC------CC-CHH--------HH--HHHHHHHHhCCEEEEC
Confidence 3456777776655443333 567899999998643221 11 110 01 3477889999999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+.... +++.+||||+|.+.|.+...... .
T Consensus 161 S~~l~~~~~~~~--------------------------~~i~~i~ngvd~~~f~~~~~~~~------------------~ 196 (373)
T cd04950 161 SPSLYEAKRRLN--------------------------PNVVLVPNGVDYEHFAAARDPPP------------------P 196 (373)
T ss_pred CHHHHHHHhhCC--------------------------CCEEEcccccCHHHhhcccccCC------------------C
Confidence 997665432211 28999999999999875431000 0
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
+ +.....++++|+|+|++.++++++.+.++.... |++.+ ++|.++...+.
T Consensus 197 -~-------~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~~------p~~~~vliG~~~~~~~~--------------- 247 (373)
T cd04950 197 -P-------ADLAALPRPVIGYYGAIAEWLDLELLEALAKAR------PDWSFVLIGPVDVSIDP--------------- 247 (373)
T ss_pred -h-------hHHhcCCCCEEEEEeccccccCHHHHHHHHHHC------CCCEEEEECCCcCccCh---------------
Confidence 0 001234678999999999988887666555432 45555 77876321110
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC-----CCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCce
Q 001492 543 DKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALV-----EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNG 617 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~-----EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~G 617 (1067)
..+...++|+|+|+++.++++.+|+.+ |++++|+.. +++|++++||||||+|||+|+.++..+ ....+
T Consensus 248 ~~~~~~~nV~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~ 320 (373)
T cd04950 248 SALLRLPNVHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEV 320 (373)
T ss_pred hHhccCCCEEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcE
Confidence 011124789999999999999999999 999999763 467999999999999999998765443 33334
Q ss_pred EEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 618 LLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
++ .+.|+++++++|.+++.++...... ...+.++.|||+..++++++.+.+
T Consensus 321 ~~-~~~d~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 321 VL-IADDPEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred EE-eCCCHHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 44 4569999999999976643221111 122245799999999999976654
No 110
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.85 E-value=5.4e-21 Score=203.34 Aligned_cols=199 Identities=17% Similarity=0.279 Sum_probs=133.4
Q ss_pred EEEEeCCCCCCCCc-hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEec
Q 001492 779 VIALDCYDSKGAPD-KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 779 lia~DiDGTLl~~~-~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~ 857 (1067)
+|++|+||||++++ ..+++.++++|++|+++| + .|+|+|||++..+..+++.++ +++||+||+.|++.
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g----~-~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~ 69 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREAG----V-KVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYP 69 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEEC
Confidence 35679999998876 789999999999999996 7 899999999999999998832 47999999999875
Q ss_pred CCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCC-chHHHH
Q 001492 858 GTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPS-KARRID 936 (1067)
Q Consensus 858 ~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~-~~~~~~ 936 (1067)
+.... .. ....|...+.. . +.+...+ ....... . .........++.|++.... ......
T Consensus 70 ~~~~~---~~-~~~~~~~~~~~--~-~~~~~~~----~~~~~~~-----~----~~~~e~~~~~~~~~~~~~~~~~~~~~ 129 (204)
T TIGR01484 70 GEILY---IE-PSDVFEEILGI--K-EEIGAEL----KSLSEHY-----V----GTFIEDKAIAVAIHYVGAELGQELDS 129 (204)
T ss_pred CEEEE---Ec-ccccHHHHHHh--h-hhcCcee----eeecccc-----c----cceeecccceeeEEEeccchhhHHHH
Confidence 32111 00 01111111100 0 0000000 0000000 0 0000123445666654321 112233
Q ss_pred HHHHHHHhcC---CcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 937 DLRQKLRMRG---LRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 937 el~~~L~~~~---~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
.+...+.... ..+.++++++. ++||+|++++|+.|++++++++|++++++++ |||+.| | ++||+.++++|||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~-~GD~~n-D-~~~~~~~~~~vam 204 (204)
T TIGR01484 130 KMRERLEKIGRNDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILA-FGDSGN-D-EEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHhhccccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEE-EcCCHH-H-HHHHHHcCCceEC
Confidence 4444444332 34677666765 9999999999999999999999999999999 999999 9 9999999999998
No 111
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.84 E-value=7.8e-19 Score=205.49 Aligned_cols=266 Identities=14% Similarity=0.104 Sum_probs=180.7
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||+||++++.........++.+++|++...++.... . .+..+.+|.+++.
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~-----------------------~-----~w~~~~~d~~~v~ 154 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH-----------------------K-----NWITPYSTRYYVA 154 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc-----------------------c-----ccccCCCCEEEEC
Confidence 57999999877543322233345689987655543100 0 1235789999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+.+.+ +|+ +..++.+++++++.. |.....
T Consensus 155 s~~~~~~l~~------------------~gi-----~~~ki~v~GiPv~~~-f~~~~~---------------------- 188 (391)
T PRK13608 155 TKETKQDFID------------------VGI-----DPSTVKVTGIPIDNK-FETPID---------------------- 188 (391)
T ss_pred CHHHHHHHHH------------------cCC-----CHHHEEEECeecChH-hccccc----------------------
Confidence 9987766532 222 123888887777643 321110
Q ss_pred cchhhHhhhhhccCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE--EEecCCChhhhhccchHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPM-ILALSRPDPKKNITTLLKAFGECRPLRELANLTL--IMGNRDDIEEMSSGNASVLITVLK 540 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l--IvG~~~~~~~l~~~~~~~~~~i~~ 540 (1067)
....+.++..++++++ +++.|++...||+..+++++... .+++.+ ++|..+ ....++.+
T Consensus 189 ---~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~-----~~~~~~vvv~G~~~----------~l~~~l~~ 250 (391)
T PRK13608 189 ---QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK-----SANAQVVMICGKSK----------ELKRSLTA 250 (391)
T ss_pred ---HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc-----CCCceEEEEcCCCH----------HHHHHHHH
Confidence 0112233444556665 55789999899999999986432 234433 444332 11222332
Q ss_pred HHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC-CC----chhhhccCC
Q 001492 541 LIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN-GG----PVDIHRALN 615 (1067)
Q Consensus 541 l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~-Gg----~~eiv~~~~ 615 (1067)
.++..++|.|.|+. ++++++|+.| |++|. .+.|+|+.||||+|+|+|+++. +| ...++.+.+
T Consensus 251 ---~~~~~~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G 317 (391)
T PRK13608 251 ---KFKSNENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKG 317 (391)
T ss_pred ---HhccCCCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCC
Confidence 23345689999985 6899999999 99986 3579999999999999999964 33 222444555
Q ss_pred ceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhcC
Q 001492 616 NGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~ 676 (1067)
.|+++ .|+++++++|.++++|++.+++|++++++..+.|+++.+++.+++++....+.+
T Consensus 318 ~g~~~--~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 318 FGKIA--DTPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred cEEEe--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 56554 589999999999999999999999999998889999999999999987665543
No 112
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.84 E-value=1.1e-20 Score=194.79 Aligned_cols=162 Identities=31% Similarity=0.520 Sum_probs=142.2
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEe
Q 001492 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAY 553 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~ 553 (1067)
....++++|+++||+.+.||+..+++|+..+.. +..+++.+ |+|+++ +...+...+..+++..++.|
T Consensus 10 ~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~-~~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 10 KIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKE-KKNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp TT-TTSEEEEEESESSGGGTHHHHHHHHHHHHH-HHHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGTTEEE
T ss_pred CCCCCCeEEEEEecCccccCHHHHHHHHHHHHh-hcCCCeEEEEEcccc-----------cccccccccccccccccccc
Confidence 345678899999999999999999999999853 12466665 788554 24567788889999999999
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHH
Q 001492 554 PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALL 633 (1067)
Q Consensus 554 ~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~ 633 (1067)
++..+.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.|++.|++.++.+|+++++.|+++++++|.
T Consensus 78 ~~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~ 153 (172)
T PF00534_consen 78 LGYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIE 153 (172)
T ss_dssp EESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHH
T ss_pred cccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHH
Confidence 9999888999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCHHHHHHHHHHHHHH
Q 001492 634 KLVSEKNLWVECRKNGWKN 652 (1067)
Q Consensus 634 ~ll~d~~~~~~~~~~~~~~ 652 (1067)
+++++++.++.|+++++++
T Consensus 154 ~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 154 KLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHhcCC
Confidence 9999999999999999874
No 113
>PLN02423 phosphomannomutase
Probab=99.80 E-value=6.9e-19 Score=192.02 Aligned_cols=199 Identities=16% Similarity=0.187 Sum_probs=121.5
Q ss_pred EEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEec
Q 001492 778 IVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYP 857 (1067)
Q Consensus 778 llia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~ 857 (1067)
+++++|+||||++++++++++++++|++|+++ + .|++||||++..+.+.+..... .+++++||+||+.|+..
T Consensus 8 ~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-----i-~fviaTGR~~~~~~~~~~~~~~--~~~~~~I~~NGa~i~~~ 79 (245)
T PLN02423 8 VIALFDVDGTLTAPRKEATPEMLEFMKELRKV-----V-TVGVVGGSDLSKISEQLGKTVI--NDYDYVFSENGLVAHKD 79 (245)
T ss_pred eEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-----C-EEEEECCcCHHHHHHHhccccc--ccCCEEEECCceEEEeC
Confidence 35567999999999889999999999999953 6 8999999999988877766311 12357999999999854
Q ss_pred CCCcccCCcCCCChhhhhccccccccchhHHHHHhhhh----c-ccCCCCCCCCCCCcccccccC---------------
Q 001492 858 GTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMN----T-TEGGENSKNSSSPIQEDQKSS--------------- 917 (1067)
Q Consensus 858 ~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~----~-~~~~~~~~~~~~~~~~~~~~~--------------- 917 (1067)
+.... ...+......+.+++.+..... . ...... . ..+.....
T Consensus 80 g~~i~-----------~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~----~--~ie~~~~i~~~~~~~~~~~~~~~ 142 (245)
T PLN02423 80 GKLIG-----------TQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRG----T--FIEFRSGMLNVSPIGRNCSQEER 142 (245)
T ss_pred CEEEE-----------EecccccCCHHHHHHHHHHHHHHHHHcCCccccC----C--eEEccCCccccCcccccCCHhHH
Confidence 31111 1001111111111221111100 0 000000 0 00000000
Q ss_pred -CceEEEEEecCCCchHHHHHHHHHHHhcCCcEEEEEeeCC-eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC--
Q 001492 918 -NAHCISYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNS-TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGE-- 993 (1067)
Q Consensus 918 -~~~ki~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~-~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGD-- 993 (1067)
...++.. + .....++.+.+......+.++.+.++ .++||+|+|+|||.||+.|+ +++++|| |||
T Consensus 143 ~~~~~i~~-i-----~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~a-FGD~~ 210 (245)
T PLN02423 143 DEFEKYDK-V-----HNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHF-FGDKT 210 (245)
T ss_pred hhHHhhCc-c-----chHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEE-EeccC
Confidence 0001100 0 11234555555544344566666653 59999999999999999999 8999999 999
Q ss_pred --CCCCChhhhhcC-CceEEEeCCC
Q 001492 994 --SGDTDYEELISG-AHKTLIMKGV 1015 (1067)
Q Consensus 994 --s~N~D~~eML~~-ag~gVaMgNA 1015 (1067)
++| | ++||+. .-.++.+.+=
T Consensus 211 ~~~~N-D-~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 211 YEGGN-D-HEIFESERTIGHTVTSP 233 (245)
T ss_pred CCCCC-c-HHHHhCCCcceEEeCCH
Confidence 799 9 999996 5567777654
No 114
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.80 E-value=5.5e-19 Score=190.27 Aligned_cols=212 Identities=12% Similarity=0.093 Sum_probs=126.2
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||++. ..+++.++++|++++++| + .|++||||++..+..+++++++. +++||+||+.|+++.
T Consensus 1 li~~DlDGTLl~~-~~~~~~~~~ai~~l~~~G----~-~~vi~TgR~~~~~~~~~~~lg~~----~~~I~~NGa~I~~~~ 70 (225)
T TIGR02461 1 VIFTDLDGTLLPP-GYEPGPAREALEELKDLG----F-PIVFVSSKTRAEQEYYREELGVE----PPFIVENGGAIFIPR 70 (225)
T ss_pred CEEEeCCCCCcCC-CCCchHHHHHHHHHHHCC----C-EEEEEeCCCHHHHHHHHHHcCCC----CcEEEcCCcEEEecC
Confidence 3667999998885 456678999999999997 7 89999999999999999998873 479999999999864
Q ss_pred CCcc-cCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCC-------CC---cccccccCCceEEEEEec
Q 001492 859 TYTE-EGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSS-------SP---IQEDQKSSNAHCISYLIK 927 (1067)
Q Consensus 859 ~~~~-~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~ki~~~~~ 927 (1067)
.... ..+.-..+..+ ......+..+.++..+........-........ .. ...........++.+. .
T Consensus 71 ~~~~~~~~~~~~~~~~-~i~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~ 148 (225)
T TIGR02461 71 GYFPFPVGAGREVGNY-EVIELGKPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFL-W 148 (225)
T ss_pred ccccccccccccCCCe-EEEEcCCCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccC-C
Confidence 2100 00000000000 001111122222222221111000000000000 00 0000000112232222 2
Q ss_pred CCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCC--CcccEEEEecCCCCCChhhhhcC
Q 001492 928 DPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRL--NVANMFVILGESGDTDYEELISG 1005 (1067)
Q Consensus 928 ~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi--~~e~vva~fGDs~N~D~~eML~~ 1005 (1067)
++ ..+.++.+.+.. ..+++..+. .++++ +.++|||.|++.|++++++ +.+++++ |||+.| | ++||+.
T Consensus 149 ~~---e~~~~~~~~~~~--~~~~~~~s~--~~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~-~GD~~n-D-~~ml~~ 217 (225)
T TIGR02461 149 SR---EGWEAILVTARA--RGLKYTHGG--RFYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVG-LGDSEN-D-FPMFEV 217 (225)
T ss_pred CH---HHHHHHHHHHHH--cCCcEEECC--EEEEE-CCCCCHHHHHHHHHHHhccccCcccEEE-EcCCHH-H-HHHHHh
Confidence 22 235566666643 234555544 36776 5599999999999999987 6668999 999999 9 999999
Q ss_pred CceEEEeC
Q 001492 1006 AHKTLIMK 1013 (1067)
Q Consensus 1006 ag~gVaMg 1013 (1067)
+|+||++|
T Consensus 218 ag~~v~v~ 225 (225)
T TIGR02461 218 VDLAFLVG 225 (225)
T ss_pred CCCcEecC
Confidence 99999986
No 115
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.77 E-value=1.7e-16 Score=169.83 Aligned_cols=391 Identities=17% Similarity=0.252 Sum_probs=256.9
Q ss_pred CChHHHHHHHHHHHHHcC-CCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcc
Q 001492 190 TGGQIKYVVELARALARM-PGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLR 268 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~-G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 268 (1067)
.||-++....-.+.+.+. +. +...++|..++. .|.+.|......++.+ -.++++.++.+.. +++-
T Consensus 56 GGGGErVLW~Avr~~q~k~~n-~~~viYsGD~n~--------t~~~IL~k~k~~F~id-lDs~nI~Fi~Lk~----R~lV 121 (465)
T KOG1387|consen 56 GGGGERVLWKAVRITQRKFPN-NVIVIYSGDFNV--------TPENILNKVKNKFDID-LDSDNIFFIYLKL----RYLV 121 (465)
T ss_pred CCCcceehhHHHHHHHHhCCC-ceEEEEeCCCCC--------CHHHHHHHHHHhcCce-ecccceEEEEEEe----eeee
Confidence 678888888888888653 42 555666664321 1222222111111111 1255777776654 4455
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCch--hhHHHH
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGR--NKLEQL 346 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~--~~~~~l 346 (1067)
...-|++.--....+-..+.. +...++ ..|||.+-...++-.. ..++...++|++..+|-.-. +.+..+
T Consensus 122 ea~~~~hfTllgQaigsmIl~----~Eai~r----~~Pdi~IDtMGY~fs~-p~~r~l~~~~V~aYvHYP~iS~DML~~l 192 (465)
T KOG1387|consen 122 EASTWKHFTLLGQAIGSMILA----FEAIIR----FPPDIFIDTMGYPFSY-PIFRRLRRIPVVAYVHYPTISTDMLKKL 192 (465)
T ss_pred ecccccceehHHHHHHHHHHH----HHHHHh----CCchheEecCCCcchh-HHHHHHccCceEEEEecccccHHHHHHH
Confidence 555677664333333222222 222221 5699887553322111 12333568999999996422 222222
Q ss_pred H---hhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCC
Q 001492 347 L---KQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPR 423 (1067)
Q Consensus 347 ~---~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~r 423 (1067)
. ..|.+.+ ..-..|+++.++ -..+-..||.|++.|......+.++...+ .
T Consensus 193 ~qrq~s~~l~~-~KlaY~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~------------------------~ 245 (465)
T KOG1387|consen 193 FQRQKSGILVW-GKLAYWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN------------------------T 245 (465)
T ss_pred Hhhhhcchhhh-HHHHHHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc------------------------c
Confidence 1 1222222 122334444433 45677889999998876666555544331 5
Q ss_pred EEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 001492 424 MVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFG 503 (1067)
Q Consensus 424 v~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~ 503 (1067)
+.++.|..+++....... ....+.+.++++|.+.|.||.. +++.++
T Consensus 246 ~~iVyPPC~~e~lks~~~---------------------------------te~~r~~~ll~l~Q~RPEKnH~-~Lql~A 291 (465)
T KOG1387|consen 246 CSIVYPPCSTEDLKSKFG---------------------------------TEGERENQLLSLAQFRPEKNHK-ILQLFA 291 (465)
T ss_pred eeEEcCCCCHHHHHHHhc---------------------------------ccCCcceEEEEEeecCcccccH-HHHHHH
Confidence 677777777764332110 0124567899999999999998 555544
Q ss_pred hcccccCC----CcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEe
Q 001492 504 ECRPLREL----ANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFIN 578 (1067)
Q Consensus 504 ~l~~l~~~----~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ 578 (1067)
........ +++.| ++|+-...+ ..+.+..++.++..+++.++|.|...+|.+++..+|..| .+-|+
T Consensus 292 l~~~~~pl~a~~~~iKL~ivGScRnee-----D~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh 362 (465)
T KOG1387|consen 292 LYLKNEPLEASVSPIKLIIVGSCRNEE-----DEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVH 362 (465)
T ss_pred HHHhcCchhhccCCceEEEEeccCChh-----hHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehh
Confidence 33222232 44555 777754332 245788999999999999999999999999999999999 89999
Q ss_pred cCCCCCCCHHHHHHHHcCCCEEEcCCCCc-hhhhccC---CceEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHH
Q 001492 579 PALVEPFGLTLIEAAAHGLPMVATKNGGP-VDIHRAL---NNGLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNI 653 (1067)
Q Consensus 579 ps~~EgfgltllEAmA~G~PVVat~~Gg~-~eiv~~~---~~Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~ 653 (1067)
+-..|.||+.++||||+|+-+|+-+.||| -|||.+- .+|++.. +.++.|+++++++. +++.+..++++++..+
T Consensus 363 ~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~ 440 (465)
T KOG1387|consen 363 TMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSL 440 (465)
T ss_pred hhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998887 4676542 3699884 78899999999998 7777999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHhHhc
Q 001492 654 HLFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 654 ~~fsw~~~a~~~l~~~~~~~~~ 675 (1067)
.+|+-....+.|...+..++..
T Consensus 441 ~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 441 ARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred HHhhHHHHHHhHhHHHHHhhcc
Confidence 9999999999999999888764
No 116
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.76 E-value=3.8e-17 Score=174.18 Aligned_cols=119 Identities=33% Similarity=0.480 Sum_probs=98.3
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCC-CCH
Q 001492 485 ALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQ-YDV 562 (1067)
Q Consensus 485 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~-~dl 562 (1067)
++|++.+.||++.+++|+..+. ...+++.+ ++|.+.... .....+...+...+|.+.++++. +++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~--~~~~~~~~~i~G~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLK--ERGPDLKLVIAGDGPERE-----------YLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHH--HhCCCeEEEEEeCCCChH-----------HHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 9999999999999999999995 34467776 778776422 22233566777889999999854 455
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEe
Q 001492 563 PEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV 620 (1067)
Q Consensus 563 ~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 620 (1067)
..+++.| |++++|+..|+||++++|||+||+|||+|+.++..|++.++.+|++|
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 5566658 99999999999999999999999999999999999999888999875
No 117
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.76 E-value=3.9e-17 Score=176.62 Aligned_cols=251 Identities=10% Similarity=0.105 Sum_probs=156.1
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEecC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYYPG 858 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~~~ 858 (1067)
+|++|+||||+++++.+.+.++++|++|+++| + .||+||||++.++..+++++++. +++||+||+.|+.+.
T Consensus 3 LIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~G----I-~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p~ 73 (302)
T PRK12702 3 LVLSSLDGSLLDLEFNSYGAARQALAALERRS----I-PLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVPE 73 (302)
T ss_pred EEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEcc
Confidence 55569999999987888999999999999997 8 89999999999999999998874 489999999999874
Q ss_pred CCccc----CCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCccc----------c--cccCCceEE
Q 001492 859 TYTEE----GGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQE----------D--QKSSNAHCI 922 (1067)
Q Consensus 859 ~~~~~----~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~ki 922 (1067)
..... ......+..|. +........++..+..+....... .....+....+ . ....+.|.-
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~--~~lg~~y~~ir~~L~~l~~~~~~~-f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SE 150 (302)
T PRK12702 74 HYFPAGILDEQWQHRPPYYV--CALGLPYPCLRHILQQVRQDSHLD-LIGFGDWTASELAAATGIPLEEAERAQKREYSE 150 (302)
T ss_pred ccccccccccccccCCCceE--EecCCCHHHHHHHHHHHHHHhCCC-ceehhhCCHHHHHHHhCcCHHHHHHHHhccCCc
Confidence 22100 00001112221 111122344555554443321110 00000000000 0 011233443
Q ss_pred EEEecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEec------------------C---CCCHHHHHHHHHHHhC
Q 001492 923 SYLIKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVP------------------L---LASRSQALRYLFVRWR 981 (1067)
Q Consensus 923 ~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p------------------~---gasKg~AL~~L~~~~g 981 (1067)
.|...... . .+++.+.+.+.++ + .+++++.++. . +++||+|++.|.+.|.
T Consensus 151 p~~w~~~~-~----~~~~~~~~~g~~~--~--~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~ 221 (302)
T PRK12702 151 IFSYSGDP-A----RLREAFAQQEANL--T--QHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQ 221 (302)
T ss_pred ceEecCCH-H----HHHHHHHHcCCeE--E--ecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 34432222 1 2266666655432 2 4445777776 5 8999999999999987
Q ss_pred CC--cccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCC-CCCCCCceeecCcccHHHHHHHHH
Q 001492 982 LN--VANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIV-PSESPLIAHVNANAKVDEIANALR 1058 (1067)
Q Consensus 982 i~--~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~-~~~~~~~~~vt~~~~~dgI~~al~ 1058 (1067)
-. .=.+++ .|||.| | ++||+.+.++|++.|....... |..- ..+ |...+... .|......|=..++.
T Consensus 222 ~~~~~~~tia-LGDspN-D-~~mLe~~D~~vvi~~~~~~~~~-~~~~-----~l~~~~~~~~~~-~a~~~GP~GW~e~v~ 291 (302)
T PRK12702 222 RHLGPIKALG-IGCSPP-D-LAFLRWSEQKVVLPSPIADSLW-KEAL-----RLGGPEVQPQWQ-LAQLPGPEGWNEVVL 291 (302)
T ss_pred hccCCceEEE-ecCChh-h-HHHHHhCCeeEEecCCCCCCcc-cccc-----cccCcccCccce-ecCCCCcHHHHHHHH
Confidence 64 236788 999999 9 9999999999999887732210 0000 000 23444444 667888889888887
Q ss_pred hh
Q 001492 1059 QV 1060 (1067)
Q Consensus 1059 ~~ 1060 (1067)
++
T Consensus 292 ~~ 293 (302)
T PRK12702 292 MW 293 (302)
T ss_pred HH
Confidence 75
No 118
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.76 E-value=3.9e-16 Score=175.21 Aligned_cols=289 Identities=26% Similarity=0.304 Sum_probs=206.9
Q ss_pred ceEEEEcCCchhH---HHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 306 PYVIHGHYADAGD---SAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 306 pDvIh~h~~~a~~---~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
+|++|.+...... .........+.+.+...|........... . ........+.+ ... .......++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPR--L--LLLLGLLRLLL-KRL--KKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCccccccccc--c--hhhHHHHHHHH-HHH--HHhccccccEEEE
Confidence 5999988763322 34455566788999999987542210000 0 00000000101 111 1111225788888
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
.+..........+. . .++.++|++++...+.+...
T Consensus 157 ~~~~~~~~~~~~~~------------------~------~~~~~~~~~~~~~~~~~~~~--------------------- 191 (381)
T COG0438 157 VSPALKELLEALGV------------------P------NKIVVIPNGIDTEKFAPARI--------------------- 191 (381)
T ss_pred CCHHHHHHHHHhCC------------------C------CCceEecCCcCHHHcCcccc---------------------
Confidence 88765222211111 0 16889999999998765210
Q ss_pred CcchhhHhhhhhccCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCChhhhhccchHHHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPH--KPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVL 539 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~--~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~ 539 (1067)
...+. ...++++||+.+.||+..+++++..+.. ..++.. +++|.++.. ...+.
T Consensus 192 ------------~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~--~~~~~~~~~~g~~~~~----------~~~~~ 247 (381)
T COG0438 192 ------------GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKK--RGPDIKLVIVGDGPER----------REELE 247 (381)
T ss_pred ------------CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhh--hcCCeEEEEEcCCCcc----------HHHHH
Confidence 01122 3689999999999999999999999953 333344 478887642 13344
Q ss_pred HHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEE
Q 001492 540 KLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLL 619 (1067)
Q Consensus 540 ~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gll 619 (1067)
.++..+...+.|.|+|.++.+++..+|+.| +++++|+..|+||++++|||++|+|||+++.++..+++.++.+|++
T Consensus 248 ~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~ 323 (381)
T COG0438 248 KLAKKLGLEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLL 323 (381)
T ss_pred HHHHHhCCCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEe
Confidence 477777777899999999878899999999 9999999999999999999999999999999999999988777888
Q ss_pred eCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhHh
Q 001492 620 VDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 620 v~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
+.+.|.+++++++..++++++.++.+.+++++.+ ..|+|+..+..+.+.+..+..
T Consensus 324 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 324 VPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 8877899999999999999988888888777777 599999999999999987654
No 119
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.73 E-value=8e-17 Score=176.10 Aligned_cols=221 Identities=10% Similarity=0.093 Sum_probs=137.2
Q ss_pred CeEEEEEEeCCCCCCC----C-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 775 RRLIVIALDCYDSKGA----P-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 775 ~klllia~DiDGTLl~----~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+++++ +|+||||.. | ...+++.++++|++|.++. ++ .|+|+|||++.++...+. ++ .=.++++
T Consensus 3 ~~~l~--lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~---~~-~v~ivSGR~~~~~~~~~~---~~---~~~l~g~ 70 (244)
T TIGR00685 3 KRAFF--FDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARP---HN-AIWIISGRKFLEKWLGVK---LP---GLGLAGE 70 (244)
T ss_pred cEEEE--EecCccccCCcCCCcccCCCHHHHHHHHHHHhCC---CC-eEEEEECCChhhccccCC---CC---ceeEEee
Confidence 35444 599999654 3 3457899999999999884 35 588999998777654432 21 1159999
Q ss_pred CCceEEecCCCcccCCcCCCC--hhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEec
Q 001492 850 SGGEMYYPGTYTEEGGKLFPD--PDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIK 927 (1067)
Q Consensus 850 nGa~I~~~~~~~~~~~~~~~d--~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 927 (1067)
+|++++..+.... ...... ..|.... ..+...+...+++..+.+ .++++||++
T Consensus 71 hG~~~~~~g~~~~--~~~~~~~~~~~~~~~------~~l~~~~~~~pG~~iE~K-----------------~~s~~~hyr 125 (244)
T TIGR00685 71 HGCEMKDNGSCQD--WVNLTEKIPSWKVRA------NELREEITTRPGVFIERK-----------------GVALAWHYR 125 (244)
T ss_pred cCEEEecCCCcce--eeechhhhhhHHHHH------HHHHHHHhcCCCcEEEec-----------------ceEEEEEec
Confidence 9999876321111 000000 1121111 112222222344444433 467888886
Q ss_pred CC-CchHH---HHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhh
Q 001492 928 DP-SKARR---IDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELI 1003 (1067)
Q Consensus 928 ~~-~~~~~---~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML 1003 (1067)
.. +.... +.++...+... ..+.++ .+..++|+.|.++|||.|++.++++++++.+++++ |||+.| | ++||
T Consensus 126 ~a~d~~~~~~~~~~~~~~~~~~-~~~~v~--~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~-iGD~~~-D-~~~~ 199 (244)
T TIGR00685 126 QAPVPELARFRAKELKEKILSF-TDLEVM--DGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVY-LGDDIT-D-EDAF 199 (244)
T ss_pred cCCCcHHHHHHHHHHHHHHhcC-CCEEEE--ECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEE-EcCCCc-H-HHHH
Confidence 54 21111 22333222221 234333 34458999999999999999999999999888888 999999 9 9999
Q ss_pred cCC--------ceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhh
Q 001492 1004 SGA--------HKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQV 1060 (1067)
Q Consensus 1004 ~~a--------g~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~ 1060 (1067)
+.+ +++|+|+... .+..| .|+.+ +.+++...|+.+
T Consensus 200 ~~~~~~~~~~g~~~v~v~~g~-----~~~~A---------------~~~~~--~~~~v~~~L~~l 242 (244)
T TIGR00685 200 RVVNNQWGNYGFYPVPIGSGS-----KKTVA---------------KFHLT--GPQQVLEFLGLL 242 (244)
T ss_pred HHHhcccCCCCeEEEEEecCC-----cCCCc---------------eEeCC--CHHHHHHHHHHH
Confidence 988 6899996222 22233 37765 445688887664
No 120
>PLN02580 trehalose-phosphatase
Probab=99.73 E-value=1.1e-16 Score=181.41 Aligned_cols=202 Identities=14% Similarity=0.196 Sum_probs=131.0
Q ss_pred EEEEeCCCCCC----CC-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCce
Q 001492 779 VIALDCYDSKG----AP-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGE 853 (1067)
Q Consensus 779 lia~DiDGTLl----~~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~ 853 (1067)
++++|+||||. +| ...+++.++++|++|.+.. .++|+|||+...+.+++...++ ++++++|.+
T Consensus 121 ~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~------~VAIVSGR~~~~L~~~l~~~~l------~laGsHG~e 188 (384)
T PLN02580 121 ALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYF------PTAIISGRSRDKVYELVGLTEL------YYAGSHGMD 188 (384)
T ss_pred EEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCC------CEEEEeCCCHHHHHHHhCCCCc------cEEEeCCce
Confidence 33359999964 34 4567899999999999874 6999999999999999976554 699999999
Q ss_pred EEecCCCccc----C--------C----cCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccC
Q 001492 854 MYYPGTYTEE----G--------G----KLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSS 917 (1067)
Q Consensus 854 I~~~~~~~~~----~--------~----~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1067)
+..+...... . + .+.....|...+... .+.+.....+.++...+.|
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v--~~~l~e~~~~~pGs~VE~K---------------- 250 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEV--FRSLVESTKDIKGAKVENH---------------- 250 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHH--HHHHHHHhccCCCCEEEec----------------
Confidence 8754211000 0 0 000011111111000 0112222333345555444
Q ss_pred CceEEEEEecCCCch---HHHHHHHHHHHhcCCcEEEEEeeCCeeEEEec-CCCCHHHHHHHHHHHhCCCccc-E-EEEe
Q 001492 918 NAHCISYLIKDPSKA---RRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVP-LLASRSQALRYLFVRWRLNVAN-M-FVIL 991 (1067)
Q Consensus 918 ~~~ki~~~~~~~~~~---~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p-~gasKg~AL~~L~~~~gi~~e~-v-va~f 991 (1067)
.+++++|++..... ...+++...+... ..+.++ .+.+++||.| .++|||.||++|++++|++..+ + .+||
T Consensus 251 -~~svavHYR~a~~~~~~~~~~~l~~~l~~~-~~l~v~--~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~i 326 (384)
T PLN02580 251 -KFCVSVHYRNVDEKNWPLVAQCVHDVLKKY-PRLRLT--HGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYI 326 (384)
T ss_pred -CcEEEEEeCCCCchHHHHHHHHHHHHHHhC-CceEEE--eCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEE
Confidence 57899999765422 1223333333322 224443 3335999999 5999999999999999998764 3 3459
Q ss_pred cCCCCCChhhhhcC-----CceEEEeCCCc
Q 001492 992 GESGDTDYEELISG-----AHKTLIMKGVV 1016 (1067)
Q Consensus 992 GDs~N~D~~eML~~-----ag~gVaMgNA~ 1016 (1067)
||+.| | ++||+. .|+||+|+|+.
T Consensus 327 GDD~T-D-edmF~~L~~~~~G~~I~Vgn~~ 354 (384)
T PLN02580 327 GDDRT-D-EDAFKVLREGNRGYGILVSSVP 354 (384)
T ss_pred CCCch-H-HHHHHhhhccCCceEEEEecCC
Confidence 99999 9 999995 59999999987
No 121
>PLN03017 trehalose-phosphatase
Probab=99.72 E-value=2.1e-16 Score=177.61 Aligned_cols=201 Identities=17% Similarity=0.168 Sum_probs=132.0
Q ss_pred EEEEEeCCCCCC----CCch-hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCc
Q 001492 778 IVIALDCYDSKG----APDK-KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGG 852 (1067)
Q Consensus 778 llia~DiDGTLl----~~~~-~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa 852 (1067)
++|++|+||||. ++++ .++++++++|++|. ++ + .|+|+|||++..+.+++.-.+ -++|++||+
T Consensus 112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~----~-~vaIvSGR~~~~l~~~~~l~~------l~l~g~hGa 179 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KC----F-PTAIVTGRCIDKVYNFVKLAE------LYYAGSHGM 179 (366)
T ss_pred eEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cC----C-cEEEEeCCCHHHHHHhhcccC------ceEEEcCCc
Confidence 355579999987 4666 79999999999999 54 6 799999999999998854322 279999999
Q ss_pred eEEecCCCcccC---C---cCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEe
Q 001492 853 EMYYPGTYTEEG---G---KLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLI 926 (1067)
Q Consensus 853 ~I~~~~~~~~~~---~---~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~ 926 (1067)
++..+....... . .+.....|...+... ...+.....+.++...+.| .+++++|+
T Consensus 180 ~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v--~~~L~~~~~~~pGa~VE~K-----------------~~~vavHy 240 (366)
T PLN03017 180 DIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEV--YRQLLEKTKSTPGAKVENH-----------------KFCASVHF 240 (366)
T ss_pred EEecCCCcceeccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCCEEEec-----------------CcEEEEEc
Confidence 998754211100 0 011111232222100 1123333445566655554 57999999
Q ss_pred cCCCchHHHHHHHHHH----HhcCCcEEEEEeeCCeeEEEecC-CCCHHHHHHHHHHHhCCCc--ccEEEEecCCCCCCh
Q 001492 927 KDPSKARRIDDLRQKL----RMRGLRCHPMYCRNSTRMQIVPL-LASRSQALRYLFVRWRLNV--ANMFVILGESGDTDY 999 (1067)
Q Consensus 927 ~~~~~~~~~~el~~~L----~~~~~~~~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~~gi~~--e~vva~fGDs~N~D~ 999 (1067)
+..... ...++...+ ... ..+.+ .++.+.+||.|. +.+||.|+++|++.++..- ..+++|+||+.+ |
T Consensus 241 R~ad~~-~~~~l~~~~~~vl~~~-~~l~v--~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D- 314 (366)
T PLN03017 241 RCVDEK-KWSELVLQVRSVLKNF-PTLKL--TQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D- 314 (366)
T ss_pred CcCCHH-HHHHHHHHHHHHHHhC-CCcEE--eCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-
Confidence 765421 223333333 222 12333 345569999995 9999999999999998763 345667999999 9
Q ss_pred hhhhcCC-----ceEEEeCCC
Q 001492 1000 EELISGA-----HKTLIMKGV 1015 (1067)
Q Consensus 1000 ~eML~~a-----g~gVaMgNA 1015 (1067)
++||+.+ |+||.+|..
T Consensus 315 EDaF~~L~~~~~G~gI~VG~~ 335 (366)
T PLN03017 315 EDAFKMLRDRGEGFGILVSKF 335 (366)
T ss_pred HHHHHHHhhcCCceEEEECCC
Confidence 9999955 678888864
No 122
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.72 E-value=1.3e-16 Score=185.19 Aligned_cols=273 Identities=15% Similarity=0.097 Sum_probs=175.0
Q ss_pred CCceEEEEcC-CchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHY-ADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~-~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+||+|. ...+..+++++..+|+|++++-+++-... ....++. + +.+++ ....||.+++
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~-----~~~~~~~-~------~~r~~-----~~~~ad~~~~ 147 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGD-----RYSPMPE-E------INRQL-----TGHIADLHFA 147 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCC-----CCCCCcc-H------HHHHH-----HHHHHHhccC
Confidence 6799999996 45677788888899999987655431000 0000000 0 11111 1234899999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCC-CCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGM-DFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGi-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+|+...+.+.+. | .+..++.+++||+ |...+..... ..
T Consensus 148 ~s~~~~~~l~~~------------------G-----~~~~~I~vign~~~d~~~~~~~~~---~~--------------- 186 (365)
T TIGR00236 148 PTEQAKDNLLRE------------------N-----VKADSIFVTGNTVIDALLTNVEIA---YS--------------- 186 (365)
T ss_pred CCHHHHHHHHHc------------------C-----CCcccEEEeCChHHHHHHHHHhhc---cc---------------
Confidence 999887766432 2 2235899999996 4322211110 00
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEe-CC-CCCCCHHHHHHHHHhcccccCCCcEEEE-EecCCChhhhhccchHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALS-RP-DPKKNITTLLKAFGECRPLRELANLTLI-MGNRDDIEEMSSGNASVLITV 538 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vg-Rl-d~~Kgi~~ll~A~~~l~~l~~~~~l~lI-vG~~~~~~~l~~~~~~~~~~i 538 (1067)
...+.++. .+++++++.+ |. ...||+..+++|+.++. ...+++.++ +|.+. .+ ....
T Consensus 187 ------~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~--~~~~~~~~vi~~~~~-~~--------~~~~- 246 (365)
T TIGR00236 187 ------SPVLSEFG--EDKRYILLTLHRRENVGEPLENIFKAIREIV--EEFEDVQIVYPVHLN-PV--------VREP- 246 (365)
T ss_pred ------hhHHHhcC--CCCCEEEEecCchhhhhhHHHHHHHHHHHHH--HHCCCCEEEEECCCC-hH--------HHHH-
Confidence 00112221 2345666665 43 24589999999999884 334555553 33321 11 1111
Q ss_pred HHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEc-CCCCchhhhccCCce
Q 001492 539 LKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT-KNGGPVDIHRALNNG 617 (1067)
Q Consensus 539 ~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat-~~Gg~~eiv~~~~~G 617 (1067)
+...++..++|.|.+.++..++..+|+.| |+++.+| |..++|||+||+|||++ +.|+..+++..+ .+
T Consensus 247 --~~~~~~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~ 314 (365)
T TIGR00236 247 --LHKHLGDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TN 314 (365)
T ss_pred --HHHHhCCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ce
Confidence 22334556789999999888999999999 9998876 56689999999999996 678888888755 56
Q ss_pred EEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 001492 618 LLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLT 667 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~ 667 (1067)
+++ +.|+++++++|.+++++++.+++++++...+....+++++++.+.+
T Consensus 315 ~lv-~~d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 315 KLV-GTDKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred EEe-CCCHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 667 4799999999999999999888887665322234555555554443
No 123
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.71 E-value=2.9e-15 Score=171.64 Aligned_cols=238 Identities=13% Similarity=0.111 Sum_probs=160.7
Q ss_pred CCc-eEEEEcCCch-h--HHHHH--HHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccC
Q 001492 304 VWP-YVIHGHYADA-G--DSAAL--LSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAA 377 (1067)
Q Consensus 304 ~~p-DvIh~h~~~a-~--~~a~~--l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~A 377 (1067)
.+| |+||.|++.. + ....+ ..++.|+|+|+++|++++..... .+ ..+ ..|+..++.|
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~---~~------------~~~--~~~~~~~~~a 124 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS---NY------------YLM--KEEIDMLNLA 124 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc---cc------------hhh--HHHHHHHHhC
Confidence 346 9999999732 2 11222 22344899999999986543210 00 011 2356678999
Q ss_pred CEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCC
Q 001492 378 ELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTD 457 (1067)
Q Consensus 378 d~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~ 457 (1067)
|.|||.|+.+.+.+.+ .|+ ...++.++++..+.....+..
T Consensus 125 D~iI~~S~~~~~~l~~------------------~g~-----~~~~i~~~~~~~~~~~~~~~~----------------- 164 (333)
T PRK09814 125 DVLIVHSKKMKDRLVE------------------EGL-----TTDKIIVQGIFDYLNDIELVK----------------- 164 (333)
T ss_pred CEEEECCHHHHHHHHH------------------cCC-----CcCceEecccccccccccccc-----------------
Confidence 9999999988876633 222 113677776554332111000
Q ss_pred CCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHH
Q 001492 458 GSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLI 536 (1067)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~ 536 (1067)
.....+.|+|+|++....++ .. ..+++.+ |+|+++..+
T Consensus 165 ------------------~~~~~~~i~yaG~l~k~~~l----~~--------~~~~~~l~i~G~g~~~~----------- 203 (333)
T PRK09814 165 ------------------TPSFQKKINFAGNLEKSPFL----KN--------WSQGIKLTVFGPNPEDL----------- 203 (333)
T ss_pred ------------------cccCCceEEEecChhhchHH----Hh--------cCCCCeEEEECCCcccc-----------
Confidence 01245689999999943321 11 1234444 889886421
Q ss_pred HHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-C----------CCCCCHHHHHHHHcCCCEEEcCCC
Q 001492 537 TVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPA-L----------VEPFGLTLIEAAAHGLPMVATKNG 605 (1067)
Q Consensus 537 ~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps-~----------~EgfgltllEAmA~G~PVVat~~G 605 (1067)
...++|.|.|+++.++++.+|+.. +.+++. . .-.+|.++.||||||+|||+++.|
T Consensus 204 ---------~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~ 269 (333)
T PRK09814 204 ---------ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKA 269 (333)
T ss_pred ---------ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCc
Confidence 234689999999999999999873 333322 1 135688899999999999999999
Q ss_pred CchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCC
Q 001492 606 GPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFS 657 (1067)
Q Consensus 606 g~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fs 657 (1067)
+..++|+++.+|++++ +.++++++|.++ .++.+++|++++++..+.+.
T Consensus 270 ~~~~~V~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 270 AIADFIVENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred cHHHHHHhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997 788999999985 35778899999998875443
No 124
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.71 E-value=8.9e-16 Score=185.72 Aligned_cols=337 Identities=15% Similarity=0.137 Sum_probs=219.6
Q ss_pred CCceEEEEcCCchhHHHHHHHhc--------------CCCcEEEEeCCCchhhH---H-HHHh---------hCCCChhh
Q 001492 304 VWPYVIHGHYADAGDSAALLSGA--------------LNVPMVLTGHSLGRNKL---E-QLLK---------QGRQSKED 356 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~--------------~giP~V~t~H~l~~~~~---~-~l~~---------~g~~~~~~ 356 (1067)
.+|||||+|.+-++.+...+.+. ....+|+|.|++.+.-. . .++. .| ++...
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~g-l~~~~ 238 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLG-LPREQ 238 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhC-CCHHH
Confidence 47999999999777776664221 13678999999855332 1 1111 01 11111
Q ss_pred hhhHhHHH----HhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCC
Q 001492 357 INSTYKIM----RRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMD 432 (1067)
Q Consensus 357 i~~~y~~~----~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD 432 (1067)
+....... ..+..-+.++..|+.|.++|+...+-..+....+.+. ... ...++.-|-||||
T Consensus 239 ~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~------------~~~---~~~~i~gItNGId 303 (601)
T TIGR02094 239 LLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPG------------YEE---EEVPIGYVTNGVH 303 (601)
T ss_pred HHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhh------------ccc---ccCCccceeCCcc
Confidence 11000000 1234457789999999999998776332222211110 000 0125888999999
Q ss_pred CCCccCCCCCCccccccccccCCCC----C--------CCCCCcchhhH-------hhhh--------------------
Q 001492 433 FSNVVAQEDTPEVDGELTSLIGGTD----G--------SSPKAIPAIWS-------DVMR-------------------- 473 (1067)
Q Consensus 433 ~~~f~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~-------~~~~-------------------- 473 (1067)
+..+.+... ..+-..+-+.+ . -...++...|+ .+.+
T Consensus 304 ~~~W~~~~~-----~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~ 378 (601)
T TIGR02094 304 NPTWVAPEL-----RDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAIL 378 (601)
T ss_pred ccccCCHHH-----HHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhh
Confidence 998875431 11111000000 0 00000001111 1111
Q ss_pred ----hccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccC---CCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcC
Q 001492 474 ----FLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRE---LANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYD 546 (1067)
Q Consensus 474 ----~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~---~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~ 546 (1067)
....++.++|++++|+...||.++++.++.++.++.. .|-..+++|.++..+.+ ..++...+..+.++..
T Consensus 379 ~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~ 455 (601)
T TIGR02094 379 MATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPE 455 (601)
T ss_pred hhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhccc
Confidence 1145788999999999999999999999988854322 33333477777533222 2456777888887755
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEe-cCC-CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCC--
Q 001492 547 LYGQVAYPKHHKQYDVPEIYRLAAKTKGVFIN-PAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDP-- 622 (1067)
Q Consensus 547 l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~-ps~-~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p-- 622 (1067)
..++|.|.-..+.+--..+|+.| |++++ |+. +|++|++-+=||..|.+.+++..|...|.. ++.||+.+.+
T Consensus 456 ~~~kv~f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~ 530 (601)
T TIGR02094 456 FRGRIVFLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGE 530 (601)
T ss_pred CCCCEEEEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCc
Confidence 67789987665544455567777 99999 888 999999999999999999999999998876 5689999984
Q ss_pred ----------CCHHHHHHHHHHhh-----cC-----HHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHH
Q 001492 623 ----------HDQQAIADALLKLV-----SE-----KNLWVECRKNGWKNI-HLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 623 ----------~d~~~la~aL~~ll-----~d-----~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 669 (1067)
.|.++|-++|.+.+ ++ |..|.++.+++++.. ..|||.+++++|.+.|
T Consensus 531 ~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 531 EYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 78999999997766 23 667999999999886 5899999999999987
No 125
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.68 E-value=7.8e-15 Score=171.16 Aligned_cols=172 Identities=15% Similarity=0.094 Sum_probs=117.0
Q ss_pred hhccCCCCcEEEE-Ee-CCCCC-CCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhc-CC
Q 001492 473 RFLTNPHKPMILA-LS-RPDPK-KNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKY-DL 547 (1067)
Q Consensus 473 ~~~~~~~~~~Il~-vg-Rld~~-Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~-~l 547 (1067)
.+..++++++|+. .| |.... ++++.+++|+..+. +..+++.+ ++|+.+. ...++.+++.++ ++
T Consensus 179 ~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~--~~~~~~~~ii~~~~~~----------~~~~~~~~~~~~~~~ 246 (380)
T PRK00025 179 RLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQ--QRYPDLRFVLPLVNPK----------RREQIEEALAEYAGL 246 (380)
T ss_pred HcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH--HhCCCeEEEEecCChh----------hHHHHHHHHhhcCCC
Confidence 3444556666544 34 44443 45789999999884 34466665 4444221 123445555555 44
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEc-----------------CCCCchhh
Q 001492 548 YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT-----------------KNGGPVDI 610 (1067)
Q Consensus 548 ~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat-----------------~~Gg~~ei 610 (1067)
. +.+. ..++..+|+.| |++|.+| |.+.+|||++|+|+|++ +.++..++
T Consensus 247 ~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 247 E--VTLL----DGQKREAMAAA----DAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred C--eEEE----cccHHHHHHhC----CEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 3 4443 25899999999 9999987 88888999999999987 45666777
Q ss_pred hccCC--ceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 001492 611 HRALN--NGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 611 v~~~~--~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 672 (1067)
+.++. .+++.+..|+++++++|.++++|++.+++|++++.+..+.. -...+++..+.+.+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~ 374 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQL-RCGADERAAQAVLEL 374 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHH
Confidence 76653 45777888999999999999999999999999876555432 222444444544443
No 126
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.66 E-value=1.5e-13 Score=147.82 Aligned_cols=380 Identities=18% Similarity=0.138 Sum_probs=235.5
Q ss_pred HHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcccccccch
Q 001492 196 YVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPY 275 (1067)
Q Consensus 196 yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~ 275 (1067)
.+..=|..|++.| ++|+++.-..+-| -| ++-..+.++|+.++..|...+.++..
T Consensus 28 RMqYHA~Sla~~g--f~VdliGy~~s~p---------~e-----------~l~~hprI~ih~m~~l~~~~~~p~~~---- 81 (444)
T KOG2941|consen 28 RMQYHALSLAKLG--FQVDLIGYVESIP---------LE-----------ELLNHPRIRIHGMPNLPFLQGGPRVL---- 81 (444)
T ss_pred HHHHHHHHHHHcC--CeEEEEEecCCCC---------hH-----------HHhcCCceEEEeCCCCcccCCCchhh----
Confidence 4555688999999 9999997643222 11 12336789999998655432222211
Q ss_pred hHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc---hhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCC
Q 001492 276 IQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD---AGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQ 352 (1067)
Q Consensus 276 l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~---a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~ 352 (1067)
...-.++.....+..+|.. -..||+|..+.+. .-.++.+.+...|.++|+..|+++.. +..-+..|..
T Consensus 82 --~l~lKvf~Qfl~Ll~aL~~------~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys-l~l~~~~g~~ 152 (444)
T KOG2941|consen 82 --FLPLKVFWQFLSLLWALFV------LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS-LQLKLKLGFQ 152 (444)
T ss_pred --hhHHHHHHHHHHHHHHHHh------ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH-HHHHhhcCCC
Confidence 1111122211222222222 1359999999873 34455556677899999999999876 2212233332
Q ss_pred ChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCC
Q 001492 353 SKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMD 432 (1067)
Q Consensus 353 ~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD 432 (1067)
...-++.++. |+..-+.|+.-+|+|+.+.+++.+..+-. +-..+|.+|.. -|..+|
T Consensus 153 -----h~lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi~-------------ra~v~YDrPps----~~~~l~ 208 (444)
T KOG2941|consen 153 -----HPLVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGIN-------------RAKVLYDRPPS----KPTPLD 208 (444)
T ss_pred -----CchHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCCc-------------eeEEEecCCCC----CCCchh
Confidence 2234455554 77888999999999999888775543310 00112222221 011111
Q ss_pred CCC--ccCCCC-CCccccccccccCCCCCCCCCCcchhhHhhhhh------ccCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 001492 433 FSN--VVAQED-TPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRF------LTNPHKPMILALSRPDPKKNITTLLKAFG 503 (1067)
Q Consensus 433 ~~~--f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Il~vgRld~~Kgi~~ll~A~~ 503 (1067)
..+ |.+... ....++...+ .+.-. ......++ .......++++.....|..++..|++|+.
T Consensus 209 ~~H~lf~~l~~d~~~f~ar~~q--------~~~~~--~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~ 278 (444)
T KOG2941|consen 209 EQHELFMKLAGDHSPFRAREPQ--------DKALE--RTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALV 278 (444)
T ss_pred HHHHHHhhhccccchhhhcccc--------cchhh--hhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHH
Confidence 111 221110 0000000000 00000 00111111 12223345677777999999999999998
Q ss_pred hc-----ccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEE
Q 001492 504 EC-----RPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFI 577 (1067)
Q Consensus 504 ~l-----~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v 577 (1067)
.. ..-...|.+.. |.|.||.. +.+.+.+.++++...-.-..++.-+|.|.+++.|+ .+|++
T Consensus 279 ~y~~~~~~~~~~lP~llciITGKGPlk-----------E~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saD--lGVcL 345 (444)
T KOG2941|consen 279 IYEEQLYDKTHNLPSLLCIITGKGPLK-----------EKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASAD--LGVCL 345 (444)
T ss_pred hhhhhhhhccCCCCcEEEEEcCCCchh-----------HHHHHHHHHhcccceeeeecccccccchhHhhccc--cceEe
Confidence 33 22234577664 67878754 44557788888876555588999999999999993 35667
Q ss_pred ecCCC-CCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhc----CHHHHHHHHHHHHHH
Q 001492 578 NPALV-EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS----EKNLWVECRKNGWKN 652 (1067)
Q Consensus 578 ~ps~~-EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~----d~~~~~~~~~~~~~~ 652 (1067)
.+|.. =-.|++++....||+||+|-+.....|+|+++.||++|+ |.+++|+.|.-+++ +.+...++.++.++.
T Consensus 346 HtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 346 HTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred eecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 77653 346889999999999999999999999999999999995 89999999999999 888889999988887
Q ss_pred HHcCCHHH
Q 001492 653 IHLFSWPE 660 (1067)
Q Consensus 653 ~~~fsw~~ 660 (1067)
+.+.|+.
T Consensus 424 -~e~RW~~ 430 (444)
T KOG2941|consen 424 -QELRWDE 430 (444)
T ss_pred -HhhhHHH
Confidence 4455544
No 127
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.65 E-value=6.4e-15 Score=170.63 Aligned_cols=251 Identities=17% Similarity=0.127 Sum_probs=164.2
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+||+|.. .....++.+++..|+|++++.|+..... .+.. . ...++ ...+.+|.+++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~------~~~~-~-------~~~r~-----~~~~~ad~~~~ 147 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD------RGMP-D-------EENRH-----AIDKLSDLHFA 147 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC------CCCC-c-------hHHHH-----HHHHHhhhccC
Confidence 46999999964 4556677788888999998777532100 0110 0 01111 13467899999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCC-CCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGM-DFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGi-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+|+...+.+.+ .| .+..++.+++|++ |...+.+... . ..
T Consensus 148 ~s~~~~~~l~~------------------~G-----~~~~kI~vign~v~d~~~~~~~~~-~---~~------------- 187 (363)
T cd03786 148 PTEEARRNLLQ------------------EG-----EPPERIFVVGNTMIDALLRLLELA-K---KE------------- 187 (363)
T ss_pred CCHHHHHHHHH------------------cC-----CCcccEEEECchHHHHHHHHHHhh-c---cc-------------
Confidence 99987766532 22 2335899999985 5433221110 0 00
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDP---KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITV 538 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i 538 (1067)
..+..+..++...++++.+|+.. .||+..+++|+..+.. . ++.+++++.+. ....+
T Consensus 188 -------~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~--~--~~~vi~~~~~~----------~~~~l 246 (363)
T cd03786 188 -------LILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAE--E--DVPVVFPNHPR----------TRPRI 246 (363)
T ss_pred -------hhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh--c--CCEEEEECCCC----------hHHHH
Confidence 00112223334456778888874 7999999999998842 1 45555443321 12345
Q ss_pred HHHHHhcCC-CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC-CCchhhhccCCc
Q 001492 539 LKLIDKYDL-YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN-GGPVDIHRALNN 616 (1067)
Q Consensus 539 ~~l~~~~~l-~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~-Gg~~eiv~~~~~ 616 (1067)
.+.+.++++ .++|.|.+....++++.+|+.| |++|.+|- | +..|||++|+|||++.. +...+.+++
T Consensus 247 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~--- 314 (363)
T cd03786 247 REAGLEFLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES--- 314 (363)
T ss_pred HHHHHhhccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe---
Confidence 556666665 5789999988888999999999 99999984 4 47899999999999975 445666653
Q ss_pred eEEeCC-CCHHHHHHHHHHhhcCHHHHHHHH
Q 001492 617 GLLVDP-HDQQAIADALLKLVSEKNLWVECR 646 (1067)
Q Consensus 617 Gllv~p-~d~~~la~aL~~ll~d~~~~~~~~ 646 (1067)
|+.+.. .|+++++++|.++++++..+..++
T Consensus 315 g~~~~~~~~~~~i~~~i~~ll~~~~~~~~~~ 345 (363)
T cd03786 315 GTNVLVGTDPEAILAAIEKLLSDEFAYSLMS 345 (363)
T ss_pred eeEEecCCCHHHHHHHHHHHhcCchhhhcCC
Confidence 443333 379999999999999988766653
No 128
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.63 E-value=2.3e-14 Score=166.88 Aligned_cols=328 Identities=20% Similarity=0.235 Sum_probs=188.5
Q ss_pred CceEEEEcCCchhHHHHHHHhc-CCCcEEEEeCCCchhhHHHHHhhC--------CCChhhhhhHhHHHHhHHHhhcccc
Q 001492 305 WPYVIHGHYADAGDSAALLSGA-LNVPMVLTGHSLGRNKLEQLLKQG--------RQSKEDINSTYKIMRRIEGEELSLD 375 (1067)
Q Consensus 305 ~pDvIh~h~~~a~~~a~~l~~~-~giP~V~t~H~l~~~~~~~l~~~g--------~~~~~~i~~~y~~~~ri~~E~~~l~ 375 (1067)
..-|.|+|-|++|....++.+. ..|.+|||.|..-.... +...+ .+..+.....+.+..+...|+.+..
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~--l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~ 220 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRY--LAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAH 220 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHH--HTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHH
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhH--hhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHH
Confidence 3568899999887777666553 46888999998632221 11111 1123334455667778888999999
Q ss_pred cCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCC
Q 001492 376 AAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGG 455 (1067)
Q Consensus 376 ~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~ 455 (1067)
.||.+.++|+-...+...+++.. .=.|+|||++.+.|.... +.+.+.
T Consensus 221 ~AdvFTTVSeITa~Ea~~LL~r~------------------------pDvV~pNGl~v~~~~~~~-------efqnl~-- 267 (633)
T PF05693_consen 221 YADVFTTVSEITAKEAEHLLKRK------------------------PDVVTPNGLNVDKFPALH-------EFQNLH-- 267 (633)
T ss_dssp HSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTT-------HHHHHH--
T ss_pred hcCeeeehhhhHHHHHHHHhCCC------------------------CCEEcCCCccccccccch-------HHHHHH--
Confidence 99999999998888776655431 127889999998876443 111100
Q ss_pred CCCCCCCCcchhhHhhhh-hcc----CCC-CcEEEEEeCCCC-CCCHHHHHHHHHhcccc-c-CCCc---EEE-EEecC-
Q 001492 456 TDGSSPKAIPAIWSDVMR-FLT----NPH-KPMILALSRPDP-KKNITTLLKAFGECRPL-R-ELAN---LTL-IMGNR- 521 (1067)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~-~~~----~~~-~~~Il~vgRld~-~Kgi~~ll~A~~~l~~l-~-~~~~---l~l-IvG~~- 521 (1067)
......+....+. |.. +++ ..+|...||.+. .||++.+|+|+.++... + ...+ +.+ |++..
T Consensus 268 -----~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~ 342 (633)
T PF05693_consen 268 -----AKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKT 342 (633)
T ss_dssp -----HHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SE
T ss_pred -----HHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCcc
Confidence 0001122333332 211 223 456788899985 79999999999998532 1 1112 223 44322
Q ss_pred --CChhhhh---------ccchHHH-------------------------------------------------------
Q 001492 522 --DDIEEMS---------SGNASVL------------------------------------------------------- 535 (1067)
Q Consensus 522 --~~~~~l~---------~~~~~~~------------------------------------------------------- 535 (1067)
-..+.++ ....++.
T Consensus 343 ~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~ 422 (633)
T PF05693_consen 343 NSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDS 422 (633)
T ss_dssp EEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTT
T ss_pred CCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCc
Confidence 1111111 1111000
Q ss_pred -HHHHHHHHhcCCCC------cEEe-CCCCCCC------CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEE
Q 001492 536 -ITVLKLIDKYDLYG------QVAY-PKHHKQY------DVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVA 601 (1067)
Q Consensus 536 -~~i~~l~~~~~l~~------~V~~-~g~~~~~------dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVa 601 (1067)
..|...+.++++.+ +|.| |-+++.. +..++++.| |+.|+||.+||||.|.+|+.|+|+|.|.
T Consensus 423 ~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsIT 498 (633)
T PF05693_consen 423 NDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSIT 498 (633)
T ss_dssp T-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEE
T ss_pred cCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceee
Confidence 11444444444432 2444 3344333 688999999 9999999999999999999999999999
Q ss_pred cCCCCchhhhcc-----CCceEEe-C--CCCHHH----HHHHHHHhhc-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 001492 602 TKNGGPVDIHRA-----LNNGLLV-D--PHDQQA----IADALLKLVS-EKNLWVECRKNGWKNIHLFSWPEHCRTYLTR 668 (1067)
Q Consensus 602 t~~Gg~~eiv~~-----~~~Gllv-~--p~d~~~----la~aL~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~ 668 (1067)
|+..|+...+.+ ...|+.| + -.+.++ |++.|.+... ++..+..+++++.+.....+|......|.+.
T Consensus 499 TnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~A 578 (633)
T PF05693_consen 499 TNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKA 578 (633)
T ss_dssp ETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHH
T ss_pred ccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999888765543 3457765 2 234555 4555555544 5566777787777766899999999999999
Q ss_pred HHHhHhcC
Q 001492 669 VAACRMRH 676 (1067)
Q Consensus 669 ~~~~~~~~ 676 (1067)
|...+.+.
T Consensus 579 y~~AL~~a 586 (633)
T PF05693_consen 579 YDLALRRA 586 (633)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99888763
No 129
>PLN02151 trehalose-phosphatase
Probab=99.63 E-value=7.9e-15 Score=164.49 Aligned_cols=201 Identities=14% Similarity=0.163 Sum_probs=130.4
Q ss_pred EEEEeCCCCCC----CCch-hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCce
Q 001492 779 VIALDCYDSKG----APDK-KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGE 853 (1067)
Q Consensus 779 lia~DiDGTLl----~~~~-~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~ 853 (1067)
++++|+||||. +|+. .+++.++++|++|.+. . .|+|+|||++..+..++.-.++ ++++++|.+
T Consensus 100 ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~-----~-~vaIvSGR~~~~l~~~~~~~~l------~laGsHG~e 167 (354)
T PLN02151 100 VMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC-----F-PTAIVSGRCREKVSSFVKLTEL------YYAGSHGMD 167 (354)
T ss_pred EEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC-----C-CEEEEECCCHHHHHHHcCCccc------eEEEeCCce
Confidence 44469999987 6755 7899999999999954 4 6999999999999999865443 689999999
Q ss_pred EEecCCCcc-c-C---CcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecC
Q 001492 854 MYYPGTYTE-E-G---GKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKD 928 (1067)
Q Consensus 854 I~~~~~~~~-~-~---~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 928 (1067)
+..+..... . . .....+..|...+... ...+.....+.++...+.| .+++++|++.
T Consensus 168 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v--~~~l~~~~~~~pG~~VE~K-----------------~~slavHYR~ 228 (354)
T PLN02151 168 IKGPEQGSKYKKENQSLLCQPATEFLPVINEV--YKKLVEKTKSIPGAKVENN-----------------KFCASVHFRC 228 (354)
T ss_pred eecCCCCccccccccccccccchhhHHHHHHH--HHHHHHHHhcCCCCEEEec-----------------CcEEEEEeCC
Confidence 876531110 0 0 0011122333222100 1112222344566666554 5789999976
Q ss_pred CCchHHHHHHHHHHHhc---CCcEEEEEeeCCeeEEEecC-CCCHHHHHHHHHHHhCCCcc--cEEEEecCCCCCChhhh
Q 001492 929 PSKARRIDDLRQKLRMR---GLRCHPMYCRNSTRMQIVPL-LASRSQALRYLFVRWRLNVA--NMFVILGESGDTDYEEL 1002 (1067)
Q Consensus 929 ~~~~~~~~el~~~L~~~---~~~~~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~~gi~~e--~vva~fGDs~N~D~~eM 1002 (1067)
.... ...++...+... ...+.+ .++.+.+||.|. +++||.|+++|++.++..-. .+++|+||+.+ | ++|
T Consensus 229 a~~~-~~~~l~~~l~~v~~~~~~l~v--~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-EDa 303 (354)
T PLN02151 229 VEEN-KWSDLANQVRSVLKNYPKLML--TQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-EDA 303 (354)
T ss_pred CChH-HHHHHHHHHHHHHhhCCCcEE--ecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-HHH
Confidence 5432 123333333221 112333 345569999995 99999999999999886532 35667999999 9 999
Q ss_pred hcCC-----ceEEEeCCC
Q 001492 1003 ISGA-----HKTLIMKGV 1015 (1067)
Q Consensus 1003 L~~a-----g~gVaMgNA 1015 (1067)
|+.+ |.||.++..
T Consensus 304 F~~L~~~~~G~gI~Vg~~ 321 (354)
T PLN02151 304 FKILRDKKQGLGILVSKY 321 (354)
T ss_pred HHHHhhcCCCccEEeccC
Confidence 9854 677777643
No 130
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.58 E-value=3.1e-14 Score=154.16 Aligned_cols=196 Identities=13% Similarity=0.138 Sum_probs=137.3
Q ss_pred cCCeEEEEEEeCCCCCCC----C-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEE
Q 001492 773 RRRRLIVIALDCYDSKGA----P-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALI 847 (1067)
Q Consensus 773 ~r~klllia~DiDGTLl~----~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I 847 (1067)
.+++++|+ |+||||.. | ...++++++++|+.|.++. +. .++|+|||+..++..++.-.++ ++|
T Consensus 16 a~~~~~~l--DyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~---~~-~v~iiSGR~~~~l~~~~~v~~i------~l~ 83 (266)
T COG1877 16 ARKRLLFL--DYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDP---RN-VVAIISGRSLAELERLFGVPGI------GLI 83 (266)
T ss_pred ccceEEEE--eccccccccccCccccCCCHHHHHHHHHHHhcC---CC-eEEEEeCCCHHHHHHhcCCCCc------cEE
Confidence 34487777 88888543 4 3446789999999999995 34 4999999999999999985555 599
Q ss_pred EcCCceEEecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEec
Q 001492 848 CSSGGEMYYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIK 927 (1067)
Q Consensus 848 ~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 927 (1067)
|+||+++..+.+..........+..|...+ ...++.++.++|+++.+.| .+.++||++
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v-----~~~l~~~v~r~pGs~iE~K-----------------~~a~~~Hyr 141 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEV-----AAILEYYVERTPGSYIERK-----------------GFAVALHYR 141 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHH-----HHHHHHHhhcCCCeEEEEc-----------------CcEEEEeec
Confidence 999999965532222111122233454555 4677888999999888876 467888987
Q ss_pred CCCchHH-HHHHHHHHHhcCCc-EEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcC
Q 001492 928 DPSKARR-IDDLRQKLRMRGLR-CHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISG 1005 (1067)
Q Consensus 928 ~~~~~~~-~~el~~~L~~~~~~-~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ 1005 (1067)
+...... ...+.+........ ++++. +...+|+.|.++|||.++++++++...+- .+++|.||+.+ | ++||+.
T Consensus 142 ~a~~~~~~~~a~~~~~~~~~~~~~~v~~--gk~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~ 216 (266)
T COG1877 142 NAEDDEGAALALAEAATLINELKLRVTP--GKMVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAA 216 (266)
T ss_pred cCCchhhHHHHHHHHHhccccccEEEEe--CceEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHh
Confidence 6553221 22233333222222 44433 33489999999999999999999887664 34555999999 9 999998
Q ss_pred Cc
Q 001492 1006 AH 1007 (1067)
Q Consensus 1006 ag 1007 (1067)
+.
T Consensus 217 v~ 218 (266)
T COG1877 217 VN 218 (266)
T ss_pred hc
Confidence 86
No 131
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.56 E-value=7.9e-14 Score=167.03 Aligned_cols=166 Identities=13% Similarity=0.162 Sum_probs=141.9
Q ss_pred EEEEEe--CCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCC----------
Q 001492 482 MILALS--RPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLY---------- 548 (1067)
Q Consensus 482 ~Il~vg--Rld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~---------- 548 (1067)
.+++++ |+ +.|.++.+|+|+..+. ...|++.| +.|-+.+ ++ ....++++++++++.
T Consensus 321 ~~I~v~idrL-~ek~~~~~I~av~~~~--~~~p~~~L~~~gy~~~-~~-------~~~~l~~~i~~~~~~~~~~~~~~~~ 389 (519)
T TIGR03713 321 TEIGFWIDGL-SDEELQQILQQLLQYI--LKNPDYELKILTYNND-ND-------ITQLLEDILEQINEEYNQDKNFFSL 389 (519)
T ss_pred eEEEEEcCCC-ChHHHHHHHHHHHHHH--hhCCCeEEEEEEecCc-hh-------HHHHHHHHHHHHHhhhchhhhcccc
Confidence 455555 99 9999999999999984 57788888 5676542 11 133444555555444
Q ss_pred -------------------CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchh
Q 001492 549 -------------------GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVD 609 (1067)
Q Consensus 549 -------------------~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~e 609 (1067)
..|.|.|.++..++...|..| .++|.+|..|+|+ +++||+++|+|+| +-|+.+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~ 461 (519)
T TIGR03713 390 SEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVETD 461 (519)
T ss_pred chhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCce
Confidence 689999998777999999999 9999999999999 9999999999999 667799
Q ss_pred hhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 001492 610 IHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTR 668 (1067)
Q Consensus 610 iv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~ 668 (1067)
+|.++.||+|| +|..+|+++|..+|.+++.|+++...+.+.++.||-+.+.++|.+.
T Consensus 462 ~V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 462 YVEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eeEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 99999999999 6999999999999999999999999999999999999999888764
No 132
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.55 E-value=6.5e-13 Score=163.52 Aligned_cols=336 Identities=18% Similarity=0.214 Sum_probs=219.9
Q ss_pred CCceEEEEcCCchhHHHH-----HHHhc----------CCCcEEEEeCCCchhh---HH-HHH--------hhCCCChhh
Q 001492 304 VWPYVIHGHYADAGDSAA-----LLSGA----------LNVPMVLTGHSLGRNK---LE-QLL--------KQGRQSKED 356 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~-----~l~~~----------~giP~V~t~H~l~~~~---~~-~l~--------~~g~~~~~~ 356 (1067)
..|||||+|.+-++.+.. ++... -...+|||.|++.+.- ++ .++ ..-.++...
T Consensus 247 ~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~~~ 326 (778)
T cd04299 247 IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSRDR 326 (778)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCHHH
Confidence 469999999998777776 44321 1357899999984432 11 111 000111111
Q ss_pred hhhHhHHH-----HhHHHhhcccccCCEEEeCCHHH---HHHHHh-hcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEe
Q 001492 357 INSTYKIM-----RRIEGEELSLDAAELVITSTKQE---IDEQWG-LYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVI 427 (1067)
Q Consensus 357 i~~~y~~~-----~ri~~E~~~l~~Ad~Vi~~S~~~---~~~~~~-~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vI 427 (1067)
+....... ..+..-+.++..|+.|.++|+-. .++++. ++.+++. ...++.-|
T Consensus 327 ~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~-------------------~~~~i~~I 387 (778)
T cd04299 327 FLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPV-------------------EEVPIGHV 387 (778)
T ss_pred HhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCc-------------------ccCceece
Confidence 11100000 12344567899999999999876 333332 1333221 11268999
Q ss_pred CCCCCCCCccCCCCCCccccccccccCCCCC---C--------CCCCcchhhH-------hhhhh---------------
Q 001492 428 PPGMDFSNVVAQEDTPEVDGELTSLIGGTDG---S--------SPKAIPAIWS-------DVMRF--------------- 474 (1067)
Q Consensus 428 PnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~-------~~~~~--------------- 474 (1067)
-|||+...+.. |+.+..+.+..+..-. . ..-++...|+ .+..+
T Consensus 388 TNGVh~~~W~~----P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~ 463 (778)
T cd04299 388 TNGVHVPTWVA----PEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGAS 463 (778)
T ss_pred eCCcchhhhcC----HHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCc
Confidence 99999998871 1222222111100000 0 0001112222 11111
Q ss_pred ---------ccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccC---CCcEEEEEecCCChhhhhccchHHHHHHHHHH
Q 001492 475 ---------LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRE---LANLTLIMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 475 ---------~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~---~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
..+|+.++|+++.|+...|+.++++..+.++.++-. .|...++.|.....++ ...+++..|..+.
T Consensus 464 ~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~---~gK~iIk~i~~~a 540 (778)
T cd04299 464 AEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADE---PGKELIQEIVEFS 540 (778)
T ss_pred hhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccch---HHHHHHHHHHHHH
Confidence 145777899999999999999999999888854322 3433346677643322 2356778888888
Q ss_pred HhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEe
Q 001492 543 DKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLV 620 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 620 (1067)
+.....++|.|+...+-+--..+++.| ||+++||+ +|+.|++-+=||..|.+-+++..|...|-- ++.||+.+
T Consensus 541 ~~p~~~~kVvfle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwai 615 (778)
T cd04299 541 RRPEFRGRIVFLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAI 615 (778)
T ss_pred hCcCCCCcEEEEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEe
Confidence 866777899997766554455667777 99999999 999999999999999999999999998887 78899999
Q ss_pred CC------------CCHHHHHHHHHHhhc----C------HHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 621 DP------------HDQQAIADALLKLVS----E------KNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 621 ~p------------~d~~~la~aL~~ll~----d------~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
.+ .|.++|-+.|.+.+- + |..|.++.+++++.+ ..|||.+++++|.+.+-
T Consensus 616 g~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 616 GDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred CCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 87 566677777755433 2 788999999999988 59999999999998775
No 133
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.53 E-value=1.4e-14 Score=157.55 Aligned_cols=198 Identities=13% Similarity=0.155 Sum_probs=114.4
Q ss_pred EeCCCCCCC----C-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEEe
Q 001492 782 LDCYDSKGA----P-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMYY 856 (1067)
Q Consensus 782 ~DiDGTLl~----~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~~ 856 (1067)
+|.||||.. | ...+++.++++|++|.+.+ +. .|+|+|||+...+..+..-.++ .++++||+++..
T Consensus 2 lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~---~~-~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~ 71 (235)
T PF02358_consen 2 LDYDGTLAPIVDDPDAAVPPPELRELLRALAADP---NN-TVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRR 71 (235)
T ss_dssp EE-TTTSS---S-GGG----HHHHHHHHHHHHHS---E---EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEE
T ss_pred cccCCccCCCCCCccccCCCHHHHHHHHHHhccC---CC-EEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEecc
Confidence 599999654 3 3457899999999999984 44 5999999999996555444333 699999999998
Q ss_pred cCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCch---H
Q 001492 857 PGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKA---R 933 (1067)
Q Consensus 857 ~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~---~ 933 (1067)
++...........+..|...+ .+.++....++++++.+.+ .++++||++..... .
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~pG~~iE~K-----------------~~sv~~Hyr~~~~~~~~~ 129 (235)
T PF02358_consen 72 PGGSEWTNLPADEDLEWKDEV-----REILEYFAERTPGSFIEDK-----------------EFSVAFHYRNAPPEFGEA 129 (235)
T ss_dssp TTE-EEE-TTGGGGHHHHHHH-----HHHHTTHHHHSTT-EEEEE-----------------TTEEEEE-TTS-ST----
T ss_pred CccccccccccccchHHHHHH-----HHHHHHHHhhccCcEEEEC-----------------CeEEEEEecCCCcchhhh
Confidence 764222111112334455544 3344555666777776665 46889999655422 1
Q ss_pred HHHHHHHHHHhc---CCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCC---cccEEEEecCCCCCChhhhhcCC-
Q 001492 934 RIDDLRQKLRMR---GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLN---VANMFVILGESGDTDYEELISGA- 1006 (1067)
Q Consensus 934 ~~~el~~~L~~~---~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~---~e~vva~fGDs~N~D~~eML~~a- 1006 (1067)
...++.+.+... ...++++... ..+||.|.+++||.|+++|++.++.. .. +++|+||+.+ | ++||+.+
T Consensus 130 ~~~~l~~~l~~~~~~~~~~~v~~g~--~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~-~~l~~GDD~t-D-E~~f~~~~ 204 (235)
T PF02358_consen 130 QARELAEQLREILASHPGLEVVPGK--KVVEVRPPGVNKGSAVRRLLEELPFAGPKPD-FVLYIGDDRT-D-EDAFRALR 204 (235)
T ss_dssp THHHHHHHHHHHHHHH-T-EEEE-S--SEEEEE-TT--HHHHHHHHHTTS----------EEEEESSHH-H-HHHHHTTT
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECC--CEEEEEeCCCChHHHHHHHHHhcCccccccc-eeEEecCCCC-C-HHHHHHHH
Confidence 234444444331 1234444333 49999999999999999999998764 33 4455999999 9 9999964
Q ss_pred -----ceEEEeCCCc
Q 001492 1007 -----HKTLIMKGVV 1016 (1067)
Q Consensus 1007 -----g~gVaMgNA~ 1016 (1067)
+.+|.++...
T Consensus 205 ~~~~~~~~i~V~~~~ 219 (235)
T PF02358_consen 205 ELEEGGFGIKVGSVS 219 (235)
T ss_dssp TS----EEEEES---
T ss_pred hcccCCCCeEEEeec
Confidence 5688887765
No 134
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.42 E-value=1.6e-13 Score=135.46 Aligned_cols=131 Identities=31% Similarity=0.450 Sum_probs=94.1
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCC
Q 001492 480 KPMILALSRPDPKKNITTLLK-AFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHH 557 (1067)
Q Consensus 480 ~~~Il~vgRld~~Kgi~~ll~-A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 557 (1067)
.++|+++|++.+.|+++.+++ ++.++. ...|++.+ |+|++++ ++ .++ ..++|.|+|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~--~~~p~~~l~i~G~~~~--~l-----------~~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLK--EKHPDIELIIIGNGPD--EL-----------KRL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHH--HHSTTEEEEEECESS---HH-----------CCH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHH--HHCcCEEEEEEeCCHH--HH-----------HHh-----cCCCEEEcCCH
Confidence 467999999999999999999 999985 34577877 8888663 11 111 23589999998
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhh
Q 001492 558 KQYDVPEIYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 558 ~~~dl~~ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll 636 (1067)
+++.++|+.| |++++|+. .++++.+++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999985 67899999999999999999999 566777656678888 789999999999998
Q ss_pred cC
Q 001492 637 SE 638 (1067)
Q Consensus 637 ~d 638 (1067)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 75
No 135
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.33 E-value=4.5e-12 Score=127.53 Aligned_cols=160 Identities=28% Similarity=0.327 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcccc
Q 001492 191 GGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKE 270 (1067)
Q Consensus 191 GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~ 270 (1067)
||+++|+.+|+++|+++| |+|+|+|+...... + + ....++.++++|+.+.. +
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~-------~-~-------------~~~~~~~~~~~~~~~~~-~---- 52 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPDPED-------D-E-------------EEEDGVRVHRLPLPRRP-W---- 52 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---GGG---------S-------------EEETTEEEEEE--S-SS-S----
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCCCcc-------c-c-------------cccCCceEEeccCCccc-h----
Confidence 799999999999999999 99999998542211 0 0 11358999999875542 1
Q ss_pred cccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhC
Q 001492 271 LLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQG 350 (1067)
Q Consensus 271 ~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g 350 (1067)
.+.. ..+...+..++.. ...+||+||+|++.++.++.++++..++|+|++.|+......
T Consensus 53 -~~~~-~~~~~~~~~~l~~------------~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~------- 111 (160)
T PF13579_consen 53 -PLRL-LRFLRRLRRLLAA------------RRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG------- 111 (160)
T ss_dssp -GGGH-CCHHHHHHHHCHH------------CT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T-----------
T ss_pred -hhhh-HHHHHHHHHHHhh------------hccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc-------
Confidence 1111 1122222222100 125699999999766666766665779999999998542211
Q ss_pred CCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCC
Q 001492 351 RQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPG 430 (1067)
Q Consensus 351 ~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnG 430 (1067)
......+.+.+ |+..++.||.|+++|+...+.+.+ +. .++ +|+.|||||
T Consensus 112 ------~~~~~~~~~~~--~~~~~~~ad~vi~~S~~~~~~l~~-~g-~~~---------------------~ri~vipnG 160 (160)
T PF13579_consen 112 ------SRWKRRLYRWL--ERRLLRRADRVIVVSEAMRRYLRR-YG-VPP---------------------DRIHVIPNG 160 (160)
T ss_dssp --------HHHHHHHHH--HHHHHHH-SEEEESSHHHHHHHHH-H----G---------------------GGEEE----
T ss_pred ------cchhhHHHHHH--HHHHHhcCCEEEECCHHHHHHHHH-hC-CCC---------------------CcEEEeCcC
Confidence 00112222333 677899999999999998887765 32 222 399999998
No 136
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.31 E-value=1.9e-09 Score=124.46 Aligned_cols=327 Identities=10% Similarity=0.102 Sum_probs=184.1
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRK 269 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k 269 (1067)
|||...=...+|++|.+.| |+|.++++... . ..+.++ ..|..++.++..+. .+
T Consensus 11 TGGHi~Pala~a~~l~~~g--~~v~~vg~~~~---~------e~~l~~------------~~g~~~~~~~~~~l----~~ 63 (352)
T PRK12446 11 SAGHVTPNLAIIPYLKEDN--WDISYIGSHQG---I------EKTIIE------------KENIPYYSISSGKL----RR 63 (352)
T ss_pred cHHHHHHHHHHHHHHHhCC--CEEEEEECCCc---c------ccccCc------------ccCCcEEEEeccCc----CC
Confidence 9999999999999999998 99999987431 1 011111 12555666654222 11
Q ss_pred ccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhh
Q 001492 270 ELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQ 349 (1067)
Q Consensus 270 ~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~ 349 (1067)
...|..+ .+...++..+.+..+.+++ .+||+||++...++..+.+.++.+++|+++.-.+.....
T Consensus 64 ~~~~~~~-~~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~------- 128 (352)
T PRK12446 64 YFDLKNI-KDPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGL------- 128 (352)
T ss_pred CchHHHH-HHHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccH-------
Confidence 1111111 1222223333333333333 689999999877777788899999999977555432211
Q ss_pred CCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC
Q 001492 350 GRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP 429 (1067)
Q Consensus 350 g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn 429 (1067)
.. +...+.|+.|+++-+...+ .+ +. .++.+.-|
T Consensus 129 --------------~n-----r~~~~~a~~v~~~f~~~~~----~~---~~---------------------~k~~~tG~ 161 (352)
T PRK12446 129 --------------AN-----KIALRFASKIFVTFEEAAK----HL---PK---------------------EKVIYTGS 161 (352)
T ss_pred --------------HH-----HHHHHhhCEEEEEccchhh----hC---CC---------------------CCeEEECC
Confidence 11 1235677878775432111 11 11 26677766
Q ss_pred CCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHH-HHHHHhcccc
Q 001492 430 GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTL-LKAFGECRPL 508 (1067)
Q Consensus 430 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~l-l~A~~~l~~l 508 (1067)
.+..+...... ......+...+++++||.+|.=-..+.+..+ .+++..+.
T Consensus 162 Pvr~~~~~~~~---------------------------~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-- 212 (352)
T PRK12446 162 PVREEVLKGNR---------------------------EKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL-- 212 (352)
T ss_pred cCCcccccccc---------------------------hHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc--
Confidence 66553321110 0111223345678888887764445555333 33444442
Q ss_pred cCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHH
Q 001492 509 RELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLT 588 (1067)
Q Consensus 509 ~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfglt 588 (1067)
..-+++.++|..+ .++ ... .+ ..+...++. .++++++|+.| |++|.- +-+.|
T Consensus 213 -~~~~vv~~~G~~~-~~~-----------~~~---~~---~~~~~~~f~-~~~m~~~~~~a----dlvIsr----~G~~t 264 (352)
T PRK12446 213 -LKYQIVHLCGKGN-LDD-----------SLQ---NK---EGYRQFEYV-HGELPDILAIT----DFVISR----AGSNA 264 (352)
T ss_pred -cCcEEEEEeCCch-HHH-----------HHh---hc---CCcEEecch-hhhHHHHHHhC----CEEEEC----CChhH
Confidence 2223444666542 211 111 11 122233442 25799999999 988854 56789
Q ss_pred HHHHHHcCCCEEEcCCC-----C----chhhhccCCceEEeCCC--CHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCC
Q 001492 589 LIEAAAHGLPMVATKNG-----G----PVDIHRALNNGLLVDPH--DQQAIADALLKLVSEKNLWVECRKNGWKNIHLFS 657 (1067)
Q Consensus 589 llEAmA~G~PVVat~~G-----g----~~eiv~~~~~Gllv~p~--d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fs 657 (1067)
+.|++++|+|+|.-... + ..+.+.....|..+... +++.++++|.++++|++.+++ .++.+.
T Consensus 265 ~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~-------~~~~~~ 337 (352)
T PRK12446 265 IFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKT-------ALKKYN 337 (352)
T ss_pred HHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHH-------HHHHcC
Confidence 99999999999987532 1 12234444556666432 578999999999999876432 222344
Q ss_pred HHHHHHHHHHHH
Q 001492 658 WPEHCRTYLTRV 669 (1067)
Q Consensus 658 w~~~a~~~l~~~ 669 (1067)
...-++++.+.+
T Consensus 338 ~~~aa~~i~~~i 349 (352)
T PRK12446 338 GKEAIQTIIDHI 349 (352)
T ss_pred CCCHHHHHHHHH
Confidence 445555555544
No 137
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.31 E-value=2.2e-11 Score=124.79 Aligned_cols=169 Identities=24% Similarity=0.246 Sum_probs=85.4
Q ss_pred CCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCc
Q 001492 188 SDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYL 267 (1067)
Q Consensus 188 ~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l 267 (1067)
+..||+++++.+|+++|+++| |+|++++....++... .........+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~---- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPIEE-----------------------ELVKIFVKIPYPIR---- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-SS-----------------------TEEEE---TT-SST----
T ss_pred CCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccchh-----------------------hccceeeeeecccc----
Confidence 569999999999999999999 9999998854322110 00111111111111
Q ss_pred ccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHH
Q 001492 268 RKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLL 347 (1067)
Q Consensus 268 ~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~ 347 (1067)
+ .......+. ..+.+.+.+ .+|||||+|.+.....+..... ++|+|+|.|+.+... ..
T Consensus 60 -~--~~~~~~~~~-------~~~~~~i~~-------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~---~~ 117 (177)
T PF13439_consen 60 -K--RFLRSFFFM-------RRLRRLIKK-------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER---RF 117 (177)
T ss_dssp -S--S--HHHHHH-------HHHHHHHHH-------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H---HT
T ss_pred -c--ccchhHHHH-------HHHHHHHHH-------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc---cc
Confidence 0 001111111 122222222 3599999998743333333333 999999999875320 00
Q ss_pred hhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEe
Q 001492 348 KQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVI 427 (1067)
Q Consensus 348 ~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vI 427 (1067)
...... ....+..+ .+...++.+|.+||+|+...+++.+ +. + +..++.||
T Consensus 118 ~~~~~~-----~~~~~~~~--~~~~~~~~~~~ii~vS~~~~~~l~~-~~-~---------------------~~~ki~vI 167 (177)
T PF13439_consen 118 LKSKLS-----PYSYLNFR--IERKLYKKADRIIAVSESTKDELIK-FG-I---------------------PPEKIHVI 167 (177)
T ss_dssp TTTSCC-----CHHHHHHC--TTHHHHCCSSEEEESSHHHHHHHHH-HT------------------------SS-EEE-
T ss_pred cccccc-----hhhhhhhh--hhhhHHhcCCEEEEECHHHHHHHHH-hC-C---------------------cccCCEEE
Confidence 000000 01111111 1344479999999999998888765 43 1 22489999
Q ss_pred CCCCCCCCcc
Q 001492 428 PPGMDFSNVV 437 (1067)
Q Consensus 428 PnGiD~~~f~ 437 (1067)
|||||.+.|.
T Consensus 168 ~ngid~~~F~ 177 (177)
T PF13439_consen 168 YNGIDTDRFR 177 (177)
T ss_dssp ---B-CCCH-
T ss_pred ECCccHHHcC
Confidence 9999999873
No 138
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.31 E-value=2.9e-10 Score=132.85 Aligned_cols=250 Identities=16% Similarity=0.026 Sum_probs=147.8
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+|+++.. ......+..++.+|+|+|+.+. ...+.++ +. . -+...+.+|.|+|
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~~waw~-----~~--------~---------~r~l~~~~d~v~~ 144 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQVWAWR-----KW--------R---------AKKIEKATDFLLA 144 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-CcHhhcC-----cc--------h---------HHHHHHHHhHhhc
Confidence 67999999875 2233344577788999996652 1100000 00 0 0223567899999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPK 462 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1067)
+++.+.+.+.. .|+ ++.++.|++-.........
T Consensus 145 ~~~~e~~~~~~------------------~g~--------~~~~vGnPv~~~~~~~~~~--------------------- 177 (385)
T TIGR00215 145 ILPFEKAFYQK------------------KNV--------PCRFVGHPLLDAIPLYKPD--------------------- 177 (385)
T ss_pred cCCCcHHHHHh------------------cCC--------CEEEECCchhhhccccCCC---------------------
Confidence 99876654321 111 4566777663221110000
Q ss_pred CcchhhHhhhhhccCCCCcEEEEE--eCCCC-CCCHHHHHHHHHhcccccCCCcEEE-E-EecCCChhhhhccchHHHHH
Q 001492 463 AIPAIWSDVMRFLTNPHKPMILAL--SRPDP-KKNITTLLKAFGECRPLRELANLTL-I-MGNRDDIEEMSSGNASVLIT 537 (1067)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~Il~v--gRld~-~Kgi~~ll~A~~~l~~l~~~~~l~l-I-vG~~~~~~~l~~~~~~~~~~ 537 (1067)
....+.++..++++++|+.+ +|..+ .|++..+++|+..+. +..|++.+ + +++.... ..
T Consensus 178 ----~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~--~~~p~~~~vi~~~~~~~~-----------~~ 240 (385)
T TIGR00215 178 ----RKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLE--QQEPDLRRVLPVVNFKRR-----------LQ 240 (385)
T ss_pred ----HHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHH--HhCCCeEEEEEeCCchhH-----------HH
Confidence 01122344455677877765 37766 789999999999885 34567654 3 3332221 22
Q ss_pred HHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc-hh-------
Q 001492 538 VLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP-VD------- 609 (1067)
Q Consensus 538 i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~-~e------- 609 (1067)
+......+++...|.+... +...+|++| |++|.+| |.+.+|+|++|+|+|...-..+ .-
T Consensus 241 ~~~~~~~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~ 307 (385)
T TIGR00215 241 FEQIKAEYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLV 307 (385)
T ss_pred HHHHHHHhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHH
Confidence 3334445544445655433 677899999 9999998 7777799999999888732111 11
Q ss_pred ---------hhccCCce--EEeCCCCHHHHHHHHHHhhcCH----HHHHHHHHHHHHHH
Q 001492 610 ---------IHRALNNG--LLVDPHDQQAIADALLKLVSEK----NLWVECRKNGWKNI 653 (1067)
Q Consensus 610 ---------iv~~~~~G--llv~p~d~~~la~aL~~ll~d~----~~~~~~~~~~~~~~ 653 (1067)
++.+..-. ++-+.-+++.|++.+.+++.|+ +.++++.+...+..
T Consensus 308 ~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 366 (385)
T TIGR00215 308 KTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELR 366 (385)
T ss_pred cCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence 11111000 1112346889999999999999 88777766655443
No 139
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.27 E-value=7e-11 Score=120.07 Aligned_cols=257 Identities=18% Similarity=0.189 Sum_probs=153.8
Q ss_pred CeEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceE
Q 001492 775 RRLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEM 854 (1067)
Q Consensus 775 ~klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I 854 (1067)
....+|++|+||||+++ ..-.+.....+.+|++.| + .||+||.-+..++..+-+.++++ +-.+|+.||+.|
T Consensus 5 ~~~~lIFtDlD~TLl~~-~ye~~pA~pv~~el~d~G----~-~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI 75 (274)
T COG3769 5 QMPLLIFTDLDGTLLPH-SYEWQPAAPVLLELKDAG----V-PVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAI 75 (274)
T ss_pred ccceEEEEcccCcccCC-CCCCCccchHHHHHHHcC----C-eEEEeccchHHHHHHHHHhcCCC---CCceeecCCceE
Confidence 34567778999998874 223345668888999998 8 99999999999999999999986 347999999999
Q ss_pred EecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCccc---------ccccCCceEEEEE
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQE---------DQKSSNAHCISYL 925 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ki~~~ 925 (1067)
|-+.++...+........ ..+++-....+.++..+.++...+.-..........+.+ .....+.+.....
T Consensus 76 ~~p~~~~~~~~~~r~~~g-~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~ 154 (274)
T COG3769 76 YLPKGWFPFDGKPREISG-ISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETII 154 (274)
T ss_pred EecccccccCCCCceecc-eEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhhee
Confidence 987544321110000000 111211122233444443333322111100000000000 0000111222222
Q ss_pred ecCCCchHHHHHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhC-CCcccEEEEecCCCCCChhhhhc
Q 001492 926 IKDPSKARRIDDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWR-LNVANMFVILGESGDTDYEELIS 1004 (1067)
Q Consensus 926 ~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~g-i~~e~vva~fGDs~N~D~~eML~ 1004 (1067)
-.+. ...+..+...|+..++ ++.++..+--|+.....||+|+..+++-+. .....+.+..||+.| | .+||+
T Consensus 155 ~rs~--d~~~~~~~~~L~e~gl----t~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~n-D-~Pl~e 226 (274)
T COG3769 155 WRSS--DERMAQFTARLNERGL----TFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLGLGDGPN-D-APLLE 226 (274)
T ss_pred eccc--chHHHHHHHHHHhcCc----eEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEecCCCCC-c-ccHHH
Confidence 1111 1234567777777654 334444578888888899999999987653 455564444999999 9 99999
Q ss_pred CCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHHhhc
Q 001492 1005 GAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALRQVG 1061 (1067)
Q Consensus 1005 ~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~~~g 1061 (1067)
...+.+.++|-..++. +++.+ -|-..++++.-..+|....++||.
T Consensus 227 v~d~AfiV~~lnre~~--~lv~~----------i~~vv~~~~~~~~~~~~e~~~~~~ 271 (274)
T COG3769 227 VMDYAFIVKGLNREGV--HLVSS----------IPAVVERIQREGPEGWREGLDHFF 271 (274)
T ss_pred hhhhheeecccchhhh--hcccc----------chhheeeccccCchHHHHHhhhhc
Confidence 9999999998874332 23322 233444556667889999999875
No 140
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.24 E-value=3.9e-11 Score=110.55 Aligned_cols=91 Identities=18% Similarity=0.308 Sum_probs=85.9
Q ss_pred EEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 001492 575 VFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH 654 (1067)
Q Consensus 575 V~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~ 654 (1067)
++++|+..+++++.++|+||||+|||++..++..+++.++..+++++ |++++.++|..++++|+++++++++|++.+.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999988999997 9999999999999999999999999999995
Q ss_pred -cCCHHHHHHHHHH
Q 001492 655 -LFSWPEHCRTYLT 667 (1067)
Q Consensus 655 -~fsw~~~a~~~l~ 667 (1067)
+|+|...++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 9999999998863
No 141
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.22 E-value=1.2e-08 Score=116.79 Aligned_cols=327 Identities=17% Similarity=0.150 Sum_probs=196.7
Q ss_pred CChHHHHHHHHHHHHHcCCCee-EEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcc
Q 001492 190 TGGQIKYVVELARALARMPGVY-RVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLR 268 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~-~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 268 (1067)
|||...-..-|+++|.++| + +|.++..... ..+.+ + ...+..++.++.++...+..
T Consensus 10 TGGHv~pAlAl~~~l~~~g--~~~v~~~~~~~~----------~e~~l----------~-~~~~~~~~~I~~~~~~~~~~ 66 (357)
T COG0707 10 TGGHVFPALALAEELAKRG--WEQVIVLGTGDG----------LEAFL----------V-KQYGIEFELIPSGGLRRKGS 66 (357)
T ss_pred CccchhHHHHHHHHHHhhC--ccEEEEeccccc----------ceeee----------c-cccCceEEEEecccccccCc
Confidence 8999999999999999999 7 4666633110 00111 1 11267777787755422222
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHh
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
+..+... ..++..+.+..+.|.+ .+||+|.+...+.+..+.+++..+|+|+++...+.-....
T Consensus 67 ----~~~~~~~-~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~a----- 129 (357)
T COG0707 67 ----LKLLKAP-FKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLA----- 129 (357)
T ss_pred ----HHHHHHH-HHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchh-----
Confidence 2211111 1233334444445554 7899999988877777788888899999998887643321
Q ss_pred hCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeC
Q 001492 349 QGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIP 428 (1067)
Q Consensus 349 ~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIP 428 (1067)
. +...+.|+.|.+.-.. ... +.+..++.+.-
T Consensus 130 ------------n---------k~~~~~a~~V~~~f~~-~~~---------------------------~~~~~~~~~tG 160 (357)
T COG0707 130 ------------N---------KILSKFAKKVASAFPK-LEA---------------------------GVKPENVVVTG 160 (357)
T ss_pred ------------H---------HHhHHhhceeeecccc-ccc---------------------------cCCCCceEEec
Confidence 1 1124556666665542 110 11112567777
Q ss_pred CCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001492 429 PGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPL 508 (1067)
Q Consensus 429 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l 508 (1067)
+.+..+.+. ... . ..++....++++||.+|.=-..+.+..++...... +
T Consensus 161 ~Pvr~~~~~-~~~--------------------------~--~~~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~--l 209 (357)
T COG0707 161 IPVRPEFEE-LPA--------------------------A--EVRKDGRLDKKTILVTGGSQGAKALNDLVPEALAK--L 209 (357)
T ss_pred CcccHHhhc-cch--------------------------h--hhhhhccCCCcEEEEECCcchhHHHHHHHHHHHHH--h
Confidence 766665543 110 0 01111122678888887643333344444333322 1
Q ss_pred cCCCcEEE--EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCC
Q 001492 509 RELANLTL--IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFG 586 (1067)
Q Consensus 509 ~~~~~l~l--IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfg 586 (1067)
.+ ++.+ ++|... +.++......++. +...++ .++++++|+.| |++|.= +-+
T Consensus 210 ~~--~~~v~~~~G~~~------------~~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIsR----aGa 262 (357)
T COG0707 210 AN--RIQVIHQTGKND------------LEELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVISR----AGA 262 (357)
T ss_pred hh--CeEEEEEcCcch------------HHHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEeC----Ccc
Confidence 22 3444 445432 2334444444443 666666 46899999999 998854 457
Q ss_pred HHHHHHHHcCCCEEEcCCCCc--------hhhhccCCceEEeCCCC--HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcC
Q 001492 587 LTLIEAAAHGLPMVATKNGGP--------VDIHRALNNGLLVDPHD--QQAIADALLKLVSEKNLWVECRKNGWKNIHLF 656 (1067)
Q Consensus 587 ltllEAmA~G~PVVat~~Gg~--------~eiv~~~~~Gllv~p~d--~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~f 656 (1067)
+|+-|.+++|+|+|--..+.. ...+.+...|++++-.+ ++.+++.|.+++.+|+..++|..++++....-
T Consensus 263 ~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~ 342 (357)
T COG0707 263 LTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPD 342 (357)
T ss_pred cHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999775433 22344555677776555 88999999999999999999998888765433
Q ss_pred CHHHHHH
Q 001492 657 SWPEHCR 663 (1067)
Q Consensus 657 sw~~~a~ 663 (1067)
.-..++.
T Consensus 343 aa~~i~~ 349 (357)
T COG0707 343 AAERIAD 349 (357)
T ss_pred HHHHHHH
Confidence 3333333
No 142
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.11 E-value=6.9e-09 Score=121.96 Aligned_cols=139 Identities=13% Similarity=0.215 Sum_probs=110.3
Q ss_pred HHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcE
Q 001492 496 TTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGV 575 (1067)
Q Consensus 496 ~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV 575 (1067)
...|++++.+. +..|++.+=+|-+.+. -.+|.++ .++ .+.+.|+|.. ..++.++|..| |+
T Consensus 291 s~~I~~i~~Lv--~~lPd~~f~Iga~te~----------s~kL~~L-~~y--~nvvly~~~~-~~~l~~ly~~~----dl 350 (438)
T TIGR02919 291 SDQIEHLEEIV--QALPDYHFHIAALTEM----------SSKLMSL-DKY--DNVKLYPNIT-TQKIQELYQTC----DI 350 (438)
T ss_pred HHHHHHHHHHH--HhCCCcEEEEEecCcc----------cHHHHHH-Hhc--CCcEEECCcC-hHHHHHHHHhc----cE
Confidence 89999999984 6789999844776531 1345555 555 5566677765 45799999999 99
Q ss_pred EEecCCCCCCCHHHHHHHHcCCCEEEcCC-CCchhhhccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 001492 576 FINPALVEPFGLTLIEAAAHGLPMVATKN-GGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH 654 (1067)
Q Consensus 576 ~v~ps~~EgfgltllEAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~ 654 (1067)
++.++..|+|++++.||+.+|+||||.+. -|+.+++.+ |.+++++|+++|+++|.++|++++.+++.-..-++.+.
T Consensus 351 yLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~ 427 (438)
T TIGR02919 351 YLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLNDPNQFRELLEQQREHAN 427 (438)
T ss_pred EEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999884 456677764 88999999999999999999999887776555555543
Q ss_pred cCC
Q 001492 655 LFS 657 (1067)
Q Consensus 655 ~fs 657 (1067)
.-+
T Consensus 428 ~~~ 430 (438)
T TIGR02919 428 DIS 430 (438)
T ss_pred cCC
Confidence 333
No 143
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=99.05 E-value=8.3e-09 Score=106.35 Aligned_cols=180 Identities=19% Similarity=0.146 Sum_probs=113.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCcc
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIE 246 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1067)
+|++|...|. | +..||.++.+.+|+..|+++| ++|+|+++....+..
T Consensus 3 kIaIiGtrGI----P------a~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~--------------------- 49 (185)
T PF09314_consen 3 KIAIIGTRGI----P------ARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK--------------------- 49 (185)
T ss_pred eEEEEeCCCC----C------cccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC---------------------
Confidence 7999998776 2 458899999999999999999 999999985432211
Q ss_pred ccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc-hhHHHHHHHh
Q 001492 247 VGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD-AGDSAALLSG 325 (1067)
Q Consensus 247 ~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~-a~~~a~~l~~ 325 (1067)
..+..|++++.+|.... . + +..+...+ ..+..++.. ...+..+.||||.+... .+.+..++..
T Consensus 50 ~~~y~gv~l~~i~~~~~-g--~-------~~si~yd~----~sl~~al~~--~~~~~~~~~ii~ilg~~~g~~~~~~~r~ 113 (185)
T PF09314_consen 50 EFEYNGVRLVYIPAPKN-G--S-------AESIIYDF----LSLLHALRF--IKQDKIKYDIILILGYGIGPFFLPFLRK 113 (185)
T ss_pred CcccCCeEEEEeCCCCC-C--c-------hHHHHHHH----HHHHHHHHH--HhhccccCCEEEEEcCCccHHHHHHHHh
Confidence 12246999999986332 0 0 11111111 111111100 00012357899999875 3444444443
Q ss_pred --cCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHH
Q 001492 326 --ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLE 403 (1067)
Q Consensus 326 --~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~ 403 (1067)
..|.|++++.|++.+..- ++. ..-+...++ .|+.+.+.||.+|+.|+...+.+...|..
T Consensus 114 ~~~~g~~v~vN~DGlEWkR~-------KW~-----~~~k~~lk~-~E~~avk~ad~lIaDs~~I~~y~~~~y~~------ 174 (185)
T PF09314_consen 114 LRKKGGKVVVNMDGLEWKRA-------KWG-----RPAKKYLKF-SEKLAVKYADRLIADSKGIQDYIKERYGR------ 174 (185)
T ss_pred hhhcCCcEEECCCcchhhhh-------hcC-----HHHHHHHHH-HHHHHHHhCCEEEEcCHHHHHHHHHHcCC------
Confidence 247799999999855331 111 111222222 58889999999999999877776666551
Q ss_pred HHHHHHHhcCcccCCCCCCCEEEeCCCCC
Q 001492 404 KVLRARARRGVNCHGRYMPRMVVIPPGMD 432 (1067)
Q Consensus 404 ~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD 432 (1067)
.+..+||+|.|
T Consensus 175 ------------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 ------------------KKSTFIAYGAD 185 (185)
T ss_pred ------------------CCcEEecCCCC
Confidence 27899999986
No 144
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.96 E-value=9.3e-08 Score=112.55 Aligned_cols=127 Identities=16% Similarity=0.088 Sum_probs=86.1
Q ss_pred CCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeC
Q 001492 478 PHKPMILALSRPDP---KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYP 554 (1067)
Q Consensus 478 ~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~ 554 (1067)
...+++++.|.... .+-+..+++|+..+. ..+.+++|...... ....++|.+.
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~g~~~~~~-------------------~~~~~~v~~~ 293 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATLG-----QRAILSLGWGGLGA-------------------EDLPDNVRVV 293 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcC-----CeEEEEccCccccc-------------------cCCCCceEEe
Confidence 44567788888754 344455666665541 13334556543210 2345689999
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhccCCceEEeCCC--CHHHH
Q 001492 555 KHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRALNNGLLVDPH--DQQAI 628 (1067)
Q Consensus 555 g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~~~~Gllv~p~--d~~~l 628 (1067)
++++ ...++..| |++|.- |-..|+.||+++|+|+|....++- ...+.....|+.+++. +.+++
T Consensus 294 ~~~p---~~~ll~~~----d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l 362 (401)
T cd03784 294 DFVP---HDWLLPRC----AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERL 362 (401)
T ss_pred CCCC---HHHHhhhh----heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHH
Confidence 9875 45678889 999943 445899999999999999876552 3345555678777665 68999
Q ss_pred HHHHHHhhcCH
Q 001492 629 ADALLKLVSEK 639 (1067)
Q Consensus 629 a~aL~~ll~d~ 639 (1067)
+++|.++++++
T Consensus 363 ~~al~~~l~~~ 373 (401)
T cd03784 363 AAALRRLLDPP 373 (401)
T ss_pred HHHHHHHhCHH
Confidence 99999999854
No 145
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.94 E-value=9.3e-10 Score=120.36 Aligned_cols=211 Identities=19% Similarity=0.104 Sum_probs=107.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcC--CCcccccCCCC----
Q 001492 167 YIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSY--GEPAEMLTGGP---- 240 (1067)
Q Consensus 167 ~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y--~~~~e~l~~~~---- 240 (1067)
||++|+.... | -..+||...++..|+++|+++| |+|.|+++.+.. ....+ ..+...+.-..
T Consensus 1 kIl~vt~E~~----P-----~~k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y~~--~~~~~~~~~~~~~~~~~~~~~v 67 (245)
T PF08323_consen 1 KILMVTSEYA----P-----FAKVGGLGDVVGSLPKALAKQG--HDVRVIMPKYGF--IDEEYFQLEPVRRLSVPFGGPV 67 (245)
T ss_dssp EEEEE-S-BT----T-----TB-SSHHHHHHHHHHHHHHHTT---EEEEEEE-THH--HHHHCTTEEEEEEES-STTCEE
T ss_pred CEEEEEcccC----c-----ccccCcHhHHHHHHHHHHHhcC--CeEEEEEccchh--hhhhhhcceEEEEecccccccc
Confidence 6999986553 2 1489999999999999999999 999999997632 11111 00000000000
Q ss_pred -----CCCCccccccCCeEEEeccCCCCccCcccccccch-hHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC
Q 001492 241 -----EDDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPY-IQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA 314 (1067)
Q Consensus 241 -----~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~-l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~ 314 (1067)
..........+|+.++.+.... +..+..+... -..+.+...+.. .++++..+.+... ..+|||||+|.|
T Consensus 68 ~~~~~~~~~v~~~~~~~v~v~~i~~~~---~f~r~~iY~~~~~~~~d~~~rf~-~fs~a~le~~~~l-~~~pDIIH~hDW 142 (245)
T PF08323_consen 68 PVGVWYEVRVYRYPVDGVPVYFIDNPE---YFDRPGIYGDNGGDYPDNAERFA-FFSRAALELLKKL-GWKPDIIHCHDW 142 (245)
T ss_dssp EEE----EEEEEEEETTEEEEEEESHH---HHGSSSSSBSTSSBHTTHHHHHH-HHHHHHHHHHCTC-T-S-SEEEEECG
T ss_pred ccccceEEEEEEEEcCCccEEEecChh---hccccceeccCCCcchhHHHHHH-HHHHHHHHHHHhh-CCCCCEEEecCc
Confidence 0000000113577776654321 1222222210 001111121111 1233333333331 247999999999
Q ss_pred chhHHHHHHHhcC-------CCcEEEEeCCCchhhHHH--HHhhCCCChhh--hhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 315 DAGDSAALLSGAL-------NVPMVLTGHSLGRNKLEQ--LLKQGRQSKED--INSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 315 ~a~~~a~~l~~~~-------giP~V~t~H~l~~~~~~~--l~~~g~~~~~~--i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.++.++.+++... ++|+|+|+|++....... .+..-.++... ....+.....+...+..+..||.|+|+
T Consensus 143 ~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TV 222 (245)
T PF08323_consen 143 HTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTTV 222 (245)
T ss_dssp GGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEES
T ss_pred hHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeeeC
Confidence 9999999988776 599999999974322100 00000001100 001111223444567789999999999
Q ss_pred CHHHHHHHHhhc
Q 001492 384 TKQEIDEQWGLY 395 (1067)
Q Consensus 384 S~~~~~~~~~~y 395 (1067)
|+.+++++...+
T Consensus 223 S~~Ya~Ei~~~~ 234 (245)
T PF08323_consen 223 SPTYAREIQTPE 234 (245)
T ss_dssp SHHHHHHTTSHH
T ss_pred CHHHHHHHhCcc
Confidence 999999876654
No 146
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.84 E-value=2e-06 Score=101.09 Aligned_cols=110 Identities=21% Similarity=0.165 Sum_probs=75.8
Q ss_pred CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCch----hhhccCCceEEeCCC
Q 001492 548 YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPV----DIHRALNNGLLVDPH 623 (1067)
Q Consensus 548 ~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~----eiv~~~~~Gllv~p~ 623 (1067)
.++|.+.+++++ .+++..| |++|..+ |+ .|+.||+++|+|+|.....+-. ..+.....|..++..
T Consensus 274 ~~~v~~~~~~p~---~~ll~~~----~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~ 342 (392)
T TIGR01426 274 PPNVEVRQWVPQ---LEILKKA----DAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPE 342 (392)
T ss_pred CCCeEEeCCCCH---HHHHhhC----CEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccc
Confidence 467888888865 3788888 9988653 33 4889999999999997654433 334455667777643
Q ss_pred --CHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 001492 624 --DQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTR 668 (1067)
Q Consensus 624 --d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~ 668 (1067)
+.++++++|.+++.+++.++++.+-+.+....-.-+..++.+.++
T Consensus 343 ~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 343 EVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred cCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 578999999999999986666544433333344555555554443
No 147
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.84 E-value=1.2e-08 Score=104.68 Aligned_cols=69 Identities=7% Similarity=0.095 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCc
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNAN 1047 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~ 1047 (1067)
.|...++.+++++|++++++++ |||+.| | ++|++.+|+++||+||. ++++.+|+ +|+..
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~-iGD~~n-D-i~~~~~ag~~~am~nA~---~~lk~~A~---------------~I~~~ 140 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCY-VGDDLV-D-LSMMKRVGLAVAVGDAV---ADVKEAAA---------------YVTTA 140 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEE-ECCCHH-H-HHHHHHCCCeEECcCch---HHHHHhCC---------------EEcCC
Confidence 4567899999999999999999 999999 9 99999999999999999 67777887 88877
Q ss_pred ccHHHHHHHH
Q 001492 1048 AKVDEIANAL 1057 (1067)
Q Consensus 1048 ~~~dgI~~al 1057 (1067)
+..+|+...+
T Consensus 141 ~~~~g~v~e~ 150 (169)
T TIGR02726 141 RGGHGAVREV 150 (169)
T ss_pred CCCCCHHHHH
Confidence 7777654333
No 148
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.82 E-value=1.1e-08 Score=103.79 Aligned_cols=74 Identities=11% Similarity=0.031 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCc
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNAN 1047 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~ 1047 (1067)
+|..++..+++++|++++++++ +||+.| | ++|++.+|.+++|.|+.+ ..+..++ ++++.
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~-vGDs~~-D-~~~~~~ag~~~~v~~~~~---~~~~~a~---------------~i~~~ 134 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAY-IGDDLI-D-WPVMEKVGLSVAVADAHP---LLIPRAD---------------YVTRI 134 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCCcCH---HHHHhCC---------------EEecC
Confidence 4888999999999999999998 999999 9 999999999999999983 4455555 88877
Q ss_pred ccHHH-HHHHHHhhcc
Q 001492 1048 AKVDE-IANALRQVGK 1062 (1067)
Q Consensus 1048 ~~~dg-I~~al~~~g~ 1062 (1067)
...+| ++++++++=.
T Consensus 135 ~~~~g~~~~~~~~~~~ 150 (154)
T TIGR01670 135 AGGRGAVREVCELLLL 150 (154)
T ss_pred CCCCcHHHHHHHHHHH
Confidence 76555 9999887643
No 149
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.81 E-value=4.4e-06 Score=94.84 Aligned_cols=263 Identities=19% Similarity=0.251 Sum_probs=162.3
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||++...-.........-++..|+|+++----+-...+ ..|....++ .+..++..|.|++.
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~rS~---------------~~y~k~~~~--~~~~~~~i~li~aQ 184 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARLSDRSF---------------ARYAKLKFL--ARLLFKNIDLILAQ 184 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeechhhh---------------HHHHHHHHH--HHHHHHhcceeeec
Confidence 4699877655433334445566789998753322211111 122222222 35568999999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
|+...+++..+ |+. ++.+.-| +.++ .... +.
T Consensus 185 se~D~~Rf~~L------------------Ga~-------~v~v~GN-lKfd--~~~~---------------------~~ 215 (419)
T COG1519 185 SEEDAQRFRSL------------------GAK-------PVVVTGN-LKFD--IEPP---------------------PQ 215 (419)
T ss_pred CHHHHHHHHhc------------------CCc-------ceEEecc-eeec--CCCC---------------------hh
Confidence 99988887544 221 3444433 2111 1111 01
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEE-EecCCChhhhhccchHHHHHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLI-MGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lI-vG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
++...+..+.... +.++++++.+.-+ .--+.+++++..++ +..|++.+| |+..++ -...+.+++
T Consensus 216 ~~~~~~~~r~~l~-~~r~v~iaaSTH~--GEeei~l~~~~~l~--~~~~~~llIlVPRHpE----------Rf~~v~~l~ 280 (419)
T COG1519 216 LAAELAALRRQLG-GHRPVWVAASTHE--GEEEIILDAHQALK--KQFPNLLLILVPRHPE----------RFKAVENLL 280 (419)
T ss_pred hHHHHHHHHHhcC-CCCceEEEecCCC--chHHHHHHHHHHHH--hhCCCceEEEecCChh----------hHHHHHHHH
Confidence 1111222233322 3378888888832 33356889999985 567787764 554443 367788888
Q ss_pred HhcCCCCcEEeCCC-CC-----------CCCHHHHHHHhhcCCcEEEec-CCCCCCCHHHHHHHHcCCCEEEcCC-CCch
Q 001492 543 DKYDLYGQVAYPKH-HK-----------QYDVPEIYRLAAKTKGVFINP-ALVEPFGLTLIEAAAHGLPMVATKN-GGPV 608 (1067)
Q Consensus 543 ~~~~l~~~V~~~g~-~~-----------~~dl~~ly~~A~~~~dV~v~p-s~~EgfgltllEAmA~G~PVVat~~-Gg~~ 608 (1067)
...++.- ..+-.. .+ .-++..+|..| |+.++- |+.+--|--++|++++|+|||.-.. --..
T Consensus 281 ~~~gl~~-~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ 355 (419)
T COG1519 281 KRKGLSV-TRRSQGDPPFSDTDVLLGDTMGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFS 355 (419)
T ss_pred HHcCCeE-EeecCCCCCCCCCcEEEEecHhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHH
Confidence 8887731 111111 11 23689999999 886665 6766567889999999999999653 2233
Q ss_pred hh---hccCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 001492 609 DI---HRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIH 654 (1067)
Q Consensus 609 ei---v~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~ 654 (1067)
|+ +...+.|+.|+ |.+.++.++..++++++.++++++++...+.
T Consensus 356 ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 356 DIAERLLQAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred HHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 33 33344577775 5899999999999999999999999998874
No 150
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.79 E-value=2e-06 Score=101.00 Aligned_cols=151 Identities=17% Similarity=0.271 Sum_probs=95.9
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEE--EecCCChhhhhccchHHHHHHHHHHHhcCCC--------------CcEEe
Q 001492 490 DPKKNITTLLKAFGECRPLRELANLTLI--MGNRDDIEEMSSGNASVLITVLKLIDKYDLY--------------GQVAY 553 (1067)
Q Consensus 490 d~~Kgi~~ll~A~~~l~~l~~~~~l~lI--vG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~--------------~~V~~ 553 (1067)
...++++.+++++..+.+ . +++.++ +.+..+. ..+.+.+...++. +.+.+
T Consensus 218 e~~~~lp~~l~al~~L~~--~-~~~~~v~~~~~~~~~-----------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v 283 (396)
T TIGR03492 218 EAYRNLKLLLRALEALPD--S-QPFVFLAAIVPSLSL-----------EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEV 283 (396)
T ss_pred HHHccHHHHHHHHHHHhh--C-CCeEEEEEeCCCCCH-----------HHHHHHHHhcCceecCCccccchhhccCceEE
Confidence 346788999999999842 2 565553 3233322 2233334433432 12333
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc---hhhhcc----CCceEEeCCCCHH
Q 001492 554 PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP---VDIHRA----LNNGLLVDPHDQQ 626 (1067)
Q Consensus 554 ~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~---~eiv~~----~~~Gllv~p~d~~ 626 (1067)
..+ ..++.++|+.| |++|..| |.+..|++++|+|+|.....+. ..+.+. ...++.+...+++
T Consensus 284 ~~~--~~~~~~~l~~A----DlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~ 352 (396)
T TIGR03492 284 LLG--RGAFAEILHWA----DLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPE 352 (396)
T ss_pred Eec--hHhHHHHHHhC----CEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHH
Confidence 333 35799999999 9999874 5566999999999999874333 122222 1245555567889
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Q 001492 627 AIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTY 665 (1067)
Q Consensus 627 ~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~ 665 (1067)
.+++++.++++|++.++++.+++++.. .....+.+++..
T Consensus 353 ~l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i 392 (396)
T TIGR03492 353 QAAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESI 392 (396)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 999999999999998888875555444 344445555443
No 151
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.78 E-value=1.4e-08 Score=106.20 Aligned_cols=69 Identities=12% Similarity=0.039 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcc
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANA 1048 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~ 1048 (1067)
|..+++.+++++|++++++++ |||+.| | ++|++.+|++++|+++. +..+..++ |+++..
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~-VGDs~~-D-~~~a~~aG~~~~v~~~~---~~~~~~a~---------------~v~~~~ 155 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAY-IGDDLI-D-WPVMEKVGLSVAVADAH---PLLLPRAD---------------YVTRIA 155 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCChh---HHHHHhCC---------------EEecCC
Confidence 557899999999999999999 999999 9 99999999999998876 44455555 787666
Q ss_pred cHHHHHHHHH
Q 001492 1049 KVDEIANALR 1058 (1067)
Q Consensus 1049 ~~dgI~~al~ 1058 (1067)
..+|....|.
T Consensus 156 ~g~g~~~el~ 165 (183)
T PRK09484 156 GGRGAVREVC 165 (183)
T ss_pred CCCCHHHHHH
Confidence 6566655443
No 152
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.73 E-value=1.3e-08 Score=115.28 Aligned_cols=71 Identities=13% Similarity=0.152 Sum_probs=64.1
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeec
Q 001492 966 LASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVN 1045 (1067)
Q Consensus 966 gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt 1045 (1067)
+..|+.+++.+++++|++++++++ |||+.| | ++|++.+|+|||| ||. +.++..|+ +++
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIa-VGDg~N-D-l~m~~~AGlgiA~-nAk---p~Vk~~Ad---------------~~i 303 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVA-IGDGAN-D-LPMIKAAGLGIAY-HAK---PKVNEQAQ---------------VTI 303 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEE-EECCHH-H-HHHHHHCCCeEEe-CCC---HHHHhhCC---------------EEe
Confidence 458999999999999999999999 999999 9 9999999999999 999 66777777 888
Q ss_pred CcccHHHHHHHHH
Q 001492 1046 ANAKVDEIANALR 1058 (1067)
Q Consensus 1046 ~~~~~dgI~~al~ 1058 (1067)
...+-+||..-|.
T Consensus 304 ~~~~l~~~l~~~~ 316 (322)
T PRK11133 304 RHADLMGVLCILS 316 (322)
T ss_pred cCcCHHHHHHHhc
Confidence 8888999988763
No 153
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.66 E-value=4.6e-06 Score=95.32 Aligned_cols=112 Identities=16% Similarity=0.226 Sum_probs=75.7
Q ss_pred CCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcC
Q 001492 493 KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKT 572 (1067)
Q Consensus 493 Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~ 572 (1067)
-+...+++++..+ +++.+|+|+.+.. .+ .+.+++.+.++.+ +++.++|..|
T Consensus 198 ~~~~~l~~~l~~~------~~~~~i~~~~~~~-----------------~~--~~~~~v~~~~~~~-~~~~~~l~~a--- 248 (321)
T TIGR00661 198 EYRYKILELLGKI------ANVKFVCYSYEVA-----------------KN--SYNENVEIRRITT-DNFKELIKNA--- 248 (321)
T ss_pred CCHHHHHHHHHhC------CCeEEEEeCCCCC-----------------cc--ccCCCEEEEECCh-HHHHHHHHhC---
Confidence 4556777777665 3556676643210 01 1235788887755 6899999999
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchh------hhccCCceEEeCCCCHHHHHHHHHHhhcCH
Q 001492 573 KGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVD------IHRALNNGLLVDPHDQQAIADALLKLVSEK 639 (1067)
Q Consensus 573 ~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~e------iv~~~~~Gllv~p~d~~~la~aL~~ll~d~ 639 (1067)
|++|.-+ | ..++.||+++|+|+|.....+..| .+.+.+.|+.++..+. ++.+++...++++
T Consensus 249 -d~vI~~~---G-~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 249 -ELVITHG---G-FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred -CEEEECC---C-hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhccccc
Confidence 9999764 2 247999999999999988755323 3555567888887776 5566666666554
No 154
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.65 E-value=3.3e-06 Score=96.05 Aligned_cols=117 Identities=19% Similarity=0.281 Sum_probs=78.5
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCC
Q 001492 479 HKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHK 558 (1067)
Q Consensus 479 ~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~ 558 (1067)
...+++++|..+.. .+++++..+. ...+ +++|.... + .-.++|.+.++.
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~~----~~~~-~v~g~~~~--~-------------------~~~~ni~~~~~~- 240 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKALP----DYQF-IVFGPNAA--D-------------------PRPGNIHVRPFS- 240 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhCC----CCeE-EEEcCCcc--c-------------------ccCCCEEEeecC-
Confidence 45678899988765 6677777662 1223 34465420 0 004678877762
Q ss_pred CCCHHHHHHHhhcCCcEEEecCCCCCCCH-HHHHHHHcCCCEEEcCCCCchh------hhccCCceEEeCC--CCHHHHH
Q 001492 559 QYDVPEIYRLAAKTKGVFINPALVEPFGL-TLIEAAAHGLPMVATKNGGPVD------IHRALNNGLLVDP--HDQQAIA 629 (1067)
Q Consensus 559 ~~dl~~ly~~A~~~~dV~v~ps~~Egfgl-tllEAmA~G~PVVat~~Gg~~e------iv~~~~~Gllv~p--~d~~~la 629 (1067)
..++.+++..| |++|.- -|. |+.|++++|+|+|.-...+..| .++..+-|..+++ -+++.|+
T Consensus 241 ~~~~~~~m~~a----d~vIs~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~ 311 (318)
T PF13528_consen 241 TPDFAELMAAA----DLVISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLA 311 (318)
T ss_pred hHHHHHHHHhC----CEEEEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHH
Confidence 37899999999 998865 354 5999999999999987654322 3455556777654 3578888
Q ss_pred HHHHHh
Q 001492 630 DALLKL 635 (1067)
Q Consensus 630 ~aL~~l 635 (1067)
++|.++
T Consensus 312 ~~l~~~ 317 (318)
T PF13528_consen 312 EFLERL 317 (318)
T ss_pred HHHhcC
Confidence 888764
No 155
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.57 E-value=2.3e-07 Score=103.24 Aligned_cols=322 Identities=19% Similarity=0.233 Sum_probs=178.0
Q ss_pred eEEEEcCCchhHHHHHHHhc--CCCcEEEEeCCCchhhHHHHHhhCCC---------ChhhhhhHhHHHHhHHHhhcccc
Q 001492 307 YVIHGHYADAGDSAALLSGA--LNVPMVLTGHSLGRNKLEQLLKQGRQ---------SKEDINSTYKIMRRIEGEELSLD 375 (1067)
Q Consensus 307 DvIh~h~~~a~~~a~~l~~~--~giP~V~t~H~l~~~~~~~l~~~g~~---------~~~~i~~~y~~~~ri~~E~~~l~ 375 (1067)
-|-|.|.|.+|.. ..+++. +.|-.|+|.|..--.. ++-.|.. .-+.-.....|..|...|+.+..
T Consensus 176 vVahFHEW~AGVg-L~l~R~rrl~iaTifTTHATLLGR---yLCA~~~DfYNnLd~f~vD~EAGkr~IYHrYC~ERaa~h 251 (692)
T KOG3742|consen 176 VVAHFHEWQAGVG-LILCRARRLDIATIFTTHATLLGR---YLCAGNVDFYNNLDSFDVDKEAGKRQIYHRYCLERAAAH 251 (692)
T ss_pred HHHHHHHHHhccc-hheehhcccceEEEeehhHHHHHH---HHhcccchhhhchhhcccchhhccchhHHHHHHHHHhhh
Confidence 4557777866543 344444 4455689999642111 1111110 11111123346777788898999
Q ss_pred cCCEEEeCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCC
Q 001492 376 AAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGG 455 (1067)
Q Consensus 376 ~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~ 455 (1067)
.|+...++|+-..-+-..+... . .=.+.|||.+..+|...- +.+.+.
T Consensus 252 ~AhVFTTVSeITa~EAeHlLkR-K-----------------------PD~itPNGLNV~KFsA~H-------EFQNLH-- 298 (692)
T KOG3742|consen 252 TAHVFTTVSEITALEAEHLLKR-K-----------------------PDVITPNGLNVKKFSAVH-------EFQNLH-- 298 (692)
T ss_pred hhhhhhhHHHHHHHHHHHHHhc-C-----------------------CCeeCCCCcceeehhHHH-------HHHHHH--
Confidence 9998888887443332222111 0 235779999999886433 111111
Q ss_pred CCCCCCCCcchhhHhhhhhc------cCCCCcEEEEEeCCCC-CCCHHHHHHHHHhcccc---cCCCcE--E-EEEecCC
Q 001492 456 TDGSSPKAIPAIWSDVMRFL------TNPHKPMILALSRPDP-KKNITTLLKAFGECRPL---RELANL--T-LIMGNRD 522 (1067)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~Il~vgRld~-~Kgi~~ll~A~~~l~~l---~~~~~l--~-lIvG~~~ 522 (1067)
......+...++..+ ...+..+++..||.+. .||-+.+|++++++.-+ ...+.. . +|++...
T Consensus 299 -----A~~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPakt 373 (692)
T KOG3742|consen 299 -----AQKKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKT 373 (692)
T ss_pred -----HHHHHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCC
Confidence 011222333333321 1233456777899884 79999999999988532 112221 1 3554321
Q ss_pred ---Chhhhhccc---------hHHHHH-----------------------------------------------------
Q 001492 523 ---DIEEMSSGN---------ASVLIT----------------------------------------------------- 537 (1067)
Q Consensus 523 ---~~~~l~~~~---------~~~~~~----------------------------------------------------- 537 (1067)
..+.++.+. .++.+.
T Consensus 374 N~FnVesLkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa 453 (692)
T KOG3742|consen 374 NSFNVESLKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDA 453 (692)
T ss_pred CccchhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccc
Confidence 112221110 011000
Q ss_pred ---HHHHHHhcCCC----C--cEEeCC-CCC------CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEE
Q 001492 538 ---VLKLIDKYDLY----G--QVAYPK-HHK------QYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVA 601 (1067)
Q Consensus 538 ---i~~l~~~~~l~----~--~V~~~g-~~~------~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVa 601 (1067)
|+..+.+.+|. + +|.|++ +++ .-|..++.+.| .+.|+||.+||+|.|..|.-.+|+|-|+
T Consensus 454 ~DpiL~~iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvt 529 (692)
T KOG3742|consen 454 NDPILSSIRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVT 529 (692)
T ss_pred cchHHHHhHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccc----cccccccccCCCCCCchheEEecccccc
Confidence 12222222221 1 233432 221 23778889999 9999999999999999999999999999
Q ss_pred cCCCCch----hhhccC-CceEEe-C------CCCHHHHHHHHHHhhcCHHHHHHHHHHHH-HHHH-cCCHHHHHHHHHH
Q 001492 602 TKNGGPV----DIHRAL-NNGLLV-D------PHDQQAIADALLKLVSEKNLWVECRKNGW-KNIH-LFSWPEHCRTYLT 667 (1067)
Q Consensus 602 t~~Gg~~----eiv~~~-~~Gllv-~------p~d~~~la~aL~~ll~d~~~~~~~~~~~~-~~~~-~fsw~~~a~~~l~ 667 (1067)
|+..|.. |.|++. .-|+++ + .++.+++++-+...... ..+|++-++.+ ++.. ..+|..+...|.+
T Consensus 530 TNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~~q-sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~ 608 (692)
T KOG3742|consen 530 TNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFCKQ-SRRQRIIQRNRTERLSDLLDWKYLGRYYRK 608 (692)
T ss_pred ccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHHHH-HHHHHHHHhcchhhHHHHHhHHHHhHHHHH
Confidence 9987764 344332 247655 2 23556677776666543 34555444333 4443 7899998888877
Q ss_pred HHHHhHhc
Q 001492 668 RVAACRMR 675 (1067)
Q Consensus 668 ~~~~~~~~ 675 (1067)
.=.-.+.+
T Consensus 609 aR~laL~r 616 (692)
T KOG3742|consen 609 ARHLALSR 616 (692)
T ss_pred HHHHHHHh
Confidence 65544443
No 156
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.54 E-value=1.1e-06 Score=87.02 Aligned_cols=128 Identities=20% Similarity=0.302 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCccccccc
Q 001492 194 IKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLRKELLW 273 (1067)
Q Consensus 194 ~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~ 273 (1067)
..++.++++.|.+.| |+|+++|.....+. ....+++.+++++.+.. ..+
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~~~~----------------------~~~~~~i~~~~~~~~~k-------~~~ 58 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRNDYEK----------------------YEIIEGIKVIRLPSPRK-------SPL 58 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCCchh----------------------hhHhCCeEEEEecCCCC-------ccH
Confidence 357899999999999 99999998432111 11235888888864321 123
Q ss_pred chhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCch-hHHHHHHHhcCC-CcEEEEeCCCchhhHHHHHhhCC
Q 001492 274 PYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA-GDSAALLSGALN-VPMVLTGHSLGRNKLEQLLKQGR 351 (1067)
Q Consensus 274 ~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a-~~~a~~l~~~~g-iP~V~t~H~l~~~~~~~l~~~g~ 351 (1067)
+++. + .++.+.+.+ .+|||||+|.+.+ +..+.++++..+ +|+|++.|+++.... +.
T Consensus 59 ~~~~-~--------~~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~------~~ 116 (139)
T PF13477_consen 59 NYIK-Y--------FRLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNS------SK 116 (139)
T ss_pred HHHH-H--------HHHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecC------Cc
Confidence 3331 1 122222222 5799999999864 777888888888 999999998643110 00
Q ss_pred CChhhhhhHhHHHHhHHHhhcccccCCEEEeCC
Q 001492 352 QSKEDINSTYKIMRRIEGEELSLDAAELVITST 384 (1067)
Q Consensus 352 ~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S 384 (1067)
..++.+. .++.+++.||.|++.|
T Consensus 117 --------~~~~~~~--~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 117 --------KKKLKKF--IIKFAFKRADKIIVQS 139 (139)
T ss_pred --------hHHHHHH--HHHHHHHhCCEEEEcC
Confidence 0001222 2456789999999875
No 157
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.50 E-value=1.2e-05 Score=93.50 Aligned_cols=263 Identities=17% Similarity=0.150 Sum_probs=150.2
Q ss_pred CCceEEEEcC-CchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHY-ADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~-~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+|.+|. ......+++.+..+++|+++.--+.-. .+. .+ ...|++ +-+-|+..++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs--------~~~--~e------E~~r~~-----i~~la~l~f~ 150 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVT--------EGA--ID------ESIRHA-----ITKLSHLHFV 150 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccC--------CCC--ch------HHHHHH-----HHHHHhhccC
Confidence 5799999987 467778888899999999854333210 010 01 111221 2345678888
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC-CCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP-GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn-GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+++...+.+.+ .|+ ...++.++-| ++|.-.......
T Consensus 151 ~t~~~~~~L~~------------------eg~-----~~~~i~~tG~~~iD~l~~~~~~~-------------------- 187 (365)
T TIGR03568 151 ATEEYRQRVIQ------------------MGE-----DPDRVFNVGSPGLDNILSLDLLS-------------------- 187 (365)
T ss_pred CCHHHHHHHHH------------------cCC-----CCCcEEEECCcHHHHHHhhhccC--------------------
Confidence 99877665532 222 2236776644 555432211110
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCC-C--CC---CCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRP-D--PK---KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVL 535 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRl-d--~~---Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~ 535 (1067)
.......+..++++++++..-.. . .. +.+..+++++..+ . .++.++..+.+. ......
T Consensus 188 -----~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~--~~~~vi~P~~~p------~~~~i~ 251 (365)
T TIGR03568 188 -----KEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---N--KNYIFTYPNADA------GSRIIN 251 (365)
T ss_pred -----HHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---c--cCCEEEEeCCCC------CchHHH
Confidence 01112233333344554443332 2 22 3455566666544 1 134445544321 111223
Q ss_pred HHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCC
Q 001492 536 ITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALN 615 (1067)
Q Consensus 536 ~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~ 615 (1067)
..+..+... .++|.+.+.++..++..+++.| +++|-- +-|.. .||.+.|+|+|+ .|.-+|.+..+.
T Consensus 252 ~~i~~~~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vitd----SSggi-~EA~~lg~Pvv~--l~~R~e~~~~g~ 317 (365)
T TIGR03568 252 EAIEEYVNE---HPNFRLFKSLGQERYLSLLKNA----DAVIGN----SSSGI-IEAPSFGVPTIN--IGTRQKGRLRAD 317 (365)
T ss_pred HHHHHHhcC---CCCEEEECCCChHHHHHHHHhC----CEEEEc----ChhHH-HhhhhcCCCEEe--ecCCchhhhhcC
Confidence 334343221 4689999999999999999999 887732 22333 899999999995 456778877788
Q ss_pred ceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHH
Q 001492 616 NGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLT 667 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~ 667 (1067)
|.++| +.|+++|.+++.+++ ++..++.+ ... ..|-....+++..+
T Consensus 318 nvl~v-g~~~~~I~~a~~~~~-~~~~~~~~-----~~~~~pygdg~as~rI~~ 363 (365)
T TIGR03568 318 SVIDV-DPDKEEIVKAIEKLL-DPAFKKSL-----KNVKNPYGDGNSSERIIE 363 (365)
T ss_pred eEEEe-CCCHHHHHHHHHHHh-ChHHHHHH-----hhCCCCCCCChHHHHHHH
Confidence 88888 568999999999954 44433332 112 24544455555544
No 158
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.49 E-value=2.6e-07 Score=93.94 Aligned_cols=69 Identities=10% Similarity=0.142 Sum_probs=57.9
Q ss_pred EEEeCCCCCCCCc-----------hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHH---HHHHhc-----CCCC
Q 001492 780 IALDCYDSKGAPD-----------KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETI---EFLNSM-----KIEA 840 (1067)
Q Consensus 780 ia~DiDGTLl~~~-----------~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~---~~l~~l-----~i~~ 840 (1067)
+++|+||||++++ ..+++.+++++++++++| + .|+++|||++..+. +++..+ +++
T Consensus 2 VisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G----~-~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 2 VISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNG----Y-KILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred EEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcC----C-eEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 5679999988887 688999999999999997 6 79999999999884 788882 343
Q ss_pred CCCCEEEEcCCceEEe
Q 001492 841 NEFDALICSSGGEMYY 856 (1067)
Q Consensus 841 ~~~d~~I~~nGa~I~~ 856 (1067)
++++||+||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 46899999998753
No 159
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.39 E-value=1.8e-06 Score=94.81 Aligned_cols=71 Identities=13% Similarity=0.135 Sum_probs=59.1
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECC---CCHHHHHHHHHhcCCCCCCCCEEEEcCCceEE
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTA---MPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTG---R~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~ 855 (1067)
.|++|+||||++.++.++ .+.++|++|+++| + .|+++|| |+...+...++.+|++. .+|-+|+++|+.+.
T Consensus 3 ~~~~D~DGtl~~~~~~i~-~a~~~l~~l~~~g----~-~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~ 75 (249)
T TIGR01457 3 GYLIDLDGTMYKGKERIP-EAETFVHELQKRD----I-PYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATAD 75 (249)
T ss_pred EEEEeCCCceEcCCeeCc-CHHHHHHHHHHCC----C-eEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHH
Confidence 445599999888766665 7899999999997 6 7999985 99999999999999874 56789999988754
Q ss_pred e
Q 001492 856 Y 856 (1067)
Q Consensus 856 ~ 856 (1067)
|
T Consensus 76 ~ 76 (249)
T TIGR01457 76 Y 76 (249)
T ss_pred H
Confidence 4
No 160
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.35 E-value=3.4e-05 Score=86.24 Aligned_cols=98 Identities=22% Similarity=0.299 Sum_probs=73.2
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCC
Q 001492 480 KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQ 559 (1067)
Q Consensus 480 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~ 559 (1067)
+.+++++|..++.+....+++++..+ ....++.+|+|.+... ..++.+.+... +++.+.++ .
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~--~ 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNPN----------LDELKKFAKEY---PNIILFID--V 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeC--H
Confidence 45789999999977677888888765 2334566788876321 23444555443 47888777 4
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC
Q 001492 560 YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604 (1067)
Q Consensus 560 ~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~ 604 (1067)
++++++|+.| |++|.+ .|.|+.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 6899999999 999975 57999999999999998654
No 161
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.30 E-value=1.5e-06 Score=84.82 Aligned_cols=54 Identities=15% Similarity=0.252 Sum_probs=46.7
Q ss_pred EEEeCCCCCCCCch--------hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 780 IALDCYDSKGAPDK--------KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 780 ia~DiDGTLl~~~~--------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
+++|+||||...+. .+.+.+.+.|+.|+++| + .++|+|||....+..+++.+++
T Consensus 2 ~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----~-~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 2 VLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKG----I-KLALATNKSRREVLELLEELGL 63 (139)
T ss_pred eEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCC----C-eEEEEeCchHHHHHHHHHHcCC
Confidence 45699999877654 67789999999999986 6 7999999999999999999776
No 162
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.28 E-value=1.4e-05 Score=80.67 Aligned_cols=198 Identities=16% Similarity=0.185 Sum_probs=110.8
Q ss_pred eEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCC-CCCCEEEEcCCceE
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEA-NEFDALICSSGGEM 854 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~-~~~d~~I~~nGa~I 854 (1067)
-|+++ |.||||..+..+++++..+.|+.+++. + .+.++-|-.++-+.+.+ |-+. ..||+.-..||-.-
T Consensus 12 ~l~lf--dvdgtLt~~r~~~~~e~~~~l~~lr~~-----v-~ig~VggsDl~k~~eql---G~~Vl~~fDY~F~ENGl~~ 80 (252)
T KOG3189|consen 12 TLCLF--DVDGTLTPPRQKVTPEMLEFLQKLRKK-----V-TIGFVGGSDLSKQQEQL---GDNVLEEFDYVFSENGLVA 80 (252)
T ss_pred eEEEE--ecCCccccccccCCHHHHHHHHHHhhh-----e-EEEEeecHHHHHHHHHh---chhHHhhhcccccCCCeeE
Confidence 34455 999999988889999999999999877 6 78888888666555444 4443 56999999999776
Q ss_pred EecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchH-
Q 001492 855 YYPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKAR- 933 (1067)
Q Consensus 855 ~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~- 933 (1067)
|..+ .....+....++-.....+.+...+..+.......+ ...+++--.. -..++-.-++.....
T Consensus 81 yk~g-------k~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiK-----RGtFiEFRNg--MiNvsPIGR~cs~EER 146 (252)
T KOG3189|consen 81 YKGG-------KLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIK-----RGTFIEFRNG--MINVSPIGRNCSQEER 146 (252)
T ss_pred eeCC-------cchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccc-----ccceEEecCC--ceeccccccccCHHHH
Confidence 6543 333444444444221111111111111111111111 1111111000 001111001111000
Q ss_pred -----------HHHHHHHHHHhcCCcEEEEEeeCC-eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCCC
Q 001492 934 -----------RIDDLRQKLRMRGLRCHPMYCRNS-TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGE----SGDT 997 (1067)
Q Consensus 934 -----------~~~el~~~L~~~~~~~~v~~s~~~-~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGD----s~N~ 997 (1067)
.-+.+...|+.......+++|-++ -.+||.|.|-+|-.-|++|-.. |.+ +|-|||| ++|
T Consensus 147 ~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~---~IhFFGDkT~~GGN- 221 (252)
T KOG3189|consen 147 NEFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD---TIHFFGDKTMPGGN- 221 (252)
T ss_pred HHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc---eEEEeccccCCCCC-
Confidence 011222233333233445555543 4699999999999999998776 666 6777999 689
Q ss_pred Chhhhhc
Q 001492 998 DYEELIS 1004 (1067)
Q Consensus 998 D~~eML~ 1004 (1067)
| .+.|.
T Consensus 222 D-yEIf~ 227 (252)
T KOG3189|consen 222 D-YEIFA 227 (252)
T ss_pred c-ceeee
Confidence 9 78876
No 163
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.27 E-value=0.00025 Score=80.69 Aligned_cols=66 Identities=24% Similarity=0.233 Sum_probs=49.7
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC---chhhhccCCceEEeCCCCHHHHHHHHHHhhc
Q 001492 561 DVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG---PVDIHRALNNGLLVDPHDQQAIADALLKLVS 637 (1067)
Q Consensus 561 dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg---~~eiv~~~~~Gllv~p~d~~~la~aL~~ll~ 637 (1067)
+...++..| |++| -+-|....||+..|+|.|++..|- .-+.+. ..|+++.-.|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 556888889 8988 345777899999999999987653 323333 35889988999999986666544
No 164
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.14 E-value=1.4e-05 Score=85.38 Aligned_cols=62 Identities=13% Similarity=0.120 Sum_probs=50.2
Q ss_pred eEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhccc
Q 001492 959 RMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 959 ~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~ 1027 (1067)
.+-.+-.+-+|..+++.++..+|++++++++ +|||.| | ++||+.+|++||.. +. ++++.+++
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~n-D-lpml~~ag~~ia~n-~~---~~l~~~a~ 196 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSAN-D-LPMLEAAGLPIAVN-PK---PKLRALAD 196 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchh-h-HHHHHhCCCCeEeC-cC---HHHHHHHH
Confidence 3444445568999999999999999999999 999999 9 99999999999884 44 33444443
No 165
>PLN02448 UDP-glycosyltransferase family protein
Probab=98.09 E-value=0.0012 Score=79.21 Aligned_cols=94 Identities=15% Similarity=0.051 Sum_probs=59.8
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhcc-CCceEEeC--
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRA-LNNGLLVD-- 621 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~-- 621 (1067)
+++.+.++.|+.+ ++..++ .+.||.- +-..+++||+++|+|+|+-...+- ...+.+ ...|+-+.
T Consensus 323 ~~~~v~~w~pQ~~---iL~h~~--v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~ 393 (459)
T PLN02448 323 DMGLVVPWCDQLK---VLCHSS--VGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKRE 393 (459)
T ss_pred CCEEEeccCCHHH---HhccCc--cceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecc
Confidence 3566778887665 444550 1335532 334589999999999999776442 223332 24566663
Q ss_pred -----CCCHHHHHHHHHHhhcCH-HHHHHHHHHHHH
Q 001492 622 -----PHDQQAIADALLKLVSEK-NLWVECRKNGWK 651 (1067)
Q Consensus 622 -----p~d~~~la~aL~~ll~d~-~~~~~~~~~~~~ 651 (1067)
.-+.+++++++.+++.++ +.-.++++++.+
T Consensus 394 ~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 394 VGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKE 429 (459)
T ss_pred cccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 136789999999999875 444556555554
No 166
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.06 E-value=4.9e-05 Score=87.56 Aligned_cols=251 Identities=20% Similarity=0.208 Sum_probs=133.1
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEe
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVIT 382 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~ 382 (1067)
.+||+|.++.- ....++++.+..+++|+++---++ +.. -...|. .+. ..|.. +-+-|+..+|
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGl-Rs~---d~~~g~-----~de---~~R~~-----i~~la~lhf~ 128 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGL-RSG---DRTEGM-----PDE---INRHA-----IDKLAHLHFA 128 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES------S----TTSST-----THH---HHHHH-----HHHH-SEEEE
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCC-Ccc---ccCCCC-----chh---hhhhh-----hhhhhhhhcc
Confidence 46999998864 567778888999999955443332 100 001111 111 22222 3466899999
Q ss_pred CCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCC-CCCCCCccCCCCCCccccccccccCCCCCCCC
Q 001492 383 STKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPP-GMDFSNVVAQEDTPEVDGELTSLIGGTDGSSP 461 (1067)
Q Consensus 383 ~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPn-GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1067)
+|+...+.+.+. |+ +..+|.++-+ ++|.-.......
T Consensus 129 ~t~~~~~~L~~~------------------G~-----~~~rI~~vG~~~~D~l~~~~~~~-------------------- 165 (346)
T PF02350_consen 129 PTEEARERLLQE------------------GE-----PPERIFVVGNPGIDALLQNKEEI-------------------- 165 (346)
T ss_dssp SSHHHHHHHHHT------------------T-------GGGEEE---HHHHHHHHHHHTT--------------------
T ss_pred CCHHHHHHHHhc------------------CC-----CCCeEEEEChHHHHHHHHhHHHH--------------------
Confidence 999888776432 33 2247877754 344321111000
Q ss_pred CCcchhhHhhhhhccCCCCcEEEEEeCCCCC----CCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHH
Q 001492 462 KAIPAIWSDVMRFLTNPHKPMILALSRPDPK----KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLIT 537 (1067)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~Il~vgRld~~----Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~ 537 (1067)
.+... ...+.....++++|........ .....+.+++..+.+. .++.+|+.-... +.....
T Consensus 166 --~~~~~--~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~---~~~~vi~~~hn~--------p~~~~~ 230 (346)
T PF02350_consen 166 --EEKYK--NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER---QNVPVIFPLHNN--------PRGSDI 230 (346)
T ss_dssp --CC-HH--HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH---TTEEEEEE--S---------HHHHHH
T ss_pred --hhhhh--hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc---CCCcEEEEecCC--------chHHHH
Confidence 00000 0111112455666555543322 3456777777777532 455554433211 222344
Q ss_pred HHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHH-HHHHcCCCEEEcC-CCCchhhhccCC
Q 001492 538 VLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLI-EAAAHGLPMVATK-NGGPVDIHRALN 615 (1067)
Q Consensus 538 i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~Egfgltll-EAmA~G~PVVat~-~Gg~~eiv~~~~ 615 (1067)
+.+.+.++ +++.+..+++..++..+++.| +++|- -.| .+. ||..+|+|+|.-. .|--++.+..+.
T Consensus 231 i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a----~~vvg-----dSs-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~ 297 (346)
T PF02350_consen 231 IIEKLKKY---DNVRLIEPLGYEEYLSLLKNA----DLVVG-----DSS-GIQEEAPSLGKPVVNIRDSGERQEGRERGS 297 (346)
T ss_dssp HHHHHTT----TTEEEE----HHHHHHHHHHE----SEEEE-----SSH-HHHHHGGGGT--EEECSSS-S-HHHHHTTS
T ss_pred HHHHhccc---CCEEEECCCCHHHHHHHHhcc----eEEEE-----cCc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcc
Confidence 55555555 389999999999999999999 77763 335 677 9999999999985 455556655554
Q ss_pred ceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 616 NGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
..+|. .|.++|.++|.+++.+++.+.+
T Consensus 298 -nvlv~-~~~~~I~~ai~~~l~~~~~~~~ 324 (346)
T PF02350_consen 298 -NVLVG-TDPEAIIQAIEKALSDKDFYRK 324 (346)
T ss_dssp -EEEET-SSHHHHHHHHHHHHH-HHHHHH
T ss_pred -eEEeC-CCHHHHHHHHHHHHhChHHHHh
Confidence 44576 7999999999999998554444
No 167
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.05 E-value=0.003 Score=76.58 Aligned_cols=164 Identities=15% Similarity=0.114 Sum_probs=101.7
Q ss_pred hhhhhccCCC-CcEEEEEeCCCC-----CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHH
Q 001492 470 DVMRFLTNPH-KPMILALSRPDP-----KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLID 543 (1067)
Q Consensus 470 ~~~~~~~~~~-~~~Il~vgRld~-----~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~ 543 (1067)
++..|..... .+++++.|.... .+-+..+++||+.+. ..+.+-.++ +.. .
T Consensus 286 ~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~-~~~---------------~--- 341 (507)
T PHA03392 286 YLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDG-EVE---------------A--- 341 (507)
T ss_pred HHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECC-CcC---------------c---
Confidence 3444443333 467788888642 334577778887662 122222222 110 0
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHH--HhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhhccCCce
Q 001492 544 KYDLYGQVAYPKHHKQYDVPEIYR--LAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALNNG 617 (1067)
Q Consensus 544 ~~~l~~~V~~~g~~~~~dl~~ly~--~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv~~~~~G 617 (1067)
.++.++|.+.+++|+. ++++ .+ ++||.= |-..++.||+.+|+|+|.-...+ ....+...+.|
T Consensus 342 -~~~p~Nv~i~~w~Pq~---~lL~hp~v----~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G 409 (507)
T PHA03392 342 -INLPANVLTQKWFPQR---AVLKHKNV----KAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIG 409 (507)
T ss_pred -ccCCCceEEecCCCHH---HHhcCCCC----CEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcE
Confidence 1345789999999875 4553 35 788843 44578999999999999987543 23344455678
Q ss_pred EEeCCC--CHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 001492 618 LLVDPH--DQQAIADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRV 669 (1067)
Q Consensus 618 llv~p~--d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~-~fsw~~~a~~~l~~~ 669 (1067)
+.++.. +.+++.++|.+++++|..++.+.+-+..... ..+-.+-+-.+.+.+
T Consensus 410 ~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v 464 (507)
T PHA03392 410 RALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHV 464 (507)
T ss_pred EEeccCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 888653 6689999999999998876666555544432 344444444554443
No 168
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.00 E-value=4.8e-05 Score=89.27 Aligned_cols=185 Identities=12% Similarity=0.101 Sum_probs=120.4
Q ss_pred hHhhhhhccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCC
Q 001492 468 WSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDL 547 (1067)
Q Consensus 468 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l 547 (1067)
...+..|..+.+..+++++.++ .|=-+..++++.++ |+..|+-.|++...+.. -...+.+.+.+.|+
T Consensus 273 ~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~I--L~~vP~S~L~L~~~~~~---------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 273 VTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARI--LKAVPNSRLWLLRFPAS---------GEARLRRRFAAHGV 339 (468)
T ss_dssp EEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHH--HHHSTTEEEEEEETSTT---------HHHHHHHHHHHTTS
T ss_pred ccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHH--HHhCCCcEEEEeeCCHH---------HHHHHHHHHHHcCC
Confidence 4456677777777677777775 57778899999888 56778877755443321 12567778888887
Q ss_pred C-CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCch-----hhhcc-CCceEEe
Q 001492 548 Y-GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPV-----DIHRA-LNNGLLV 620 (1067)
Q Consensus 548 ~-~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~-----eiv~~-~~~Gllv 620 (1067)
. +++.|.+..+.++....|+.+ ||+|=|..+-| +.|.+||+.+|+|||+-.-.... .++.. |-.-++.
T Consensus 340 ~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 340 DPDRIIFSPVAPREEHLRRYQLA----DICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp -GGGEEEEE---HHHHHHHGGG-----SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred ChhhEEEcCCCCHHHHHHHhhhC----CEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 6 579998887777777888889 99998754433 78999999999999986532221 12222 2223333
Q ss_pred CCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-H--cCCHHHHHHHHHHHHHHh
Q 001492 621 DPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-H--LFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 621 ~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~--~fsw~~~a~~~l~~~~~~ 672 (1067)
.|.++..+.-.+|.+|++.++.+++.-++.. + .|+-..+++.+++.|+++
T Consensus 415 --~s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 --DSEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp --SSHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999998776 3 799999999999999764
No 169
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.99 E-value=0.0015 Score=73.46 Aligned_cols=124 Identities=14% Similarity=0.148 Sum_probs=102.4
Q ss_pred CCCCcEEeCCCCCC-CCHHHHHHHhhcCCcEEEecCCC---C-C--CCHHHHHHHHcCCCEEEcCCCCchhhhccCCceE
Q 001492 546 DLYGQVAYPKHHKQ-YDVPEIYRLAAKTKGVFINPALV---E-P--FGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGL 618 (1067)
Q Consensus 546 ~l~~~V~~~g~~~~-~dl~~ly~~A~~~~dV~v~ps~~---E-g--fgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gl 618 (1067)
.+.+++.+.|+.+. ..++..++.- +++++-+.. + + +..-+.|+++||.|.++.-.-+..-.+.+|..=+
T Consensus 234 ~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~i 309 (373)
T COG4641 234 TWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDII 309 (373)
T ss_pred cccchhhhhhccCccchhhhccccc----ceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheE
Confidence 35667888888877 7788888888 888876542 2 2 3778999999999999988887777777766544
Q ss_pred EeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhHhc
Q 001492 619 LVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 619 lv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~~ 675 (1067)
+. .|..++.+.+..++..++.++++.+.+.+.+ ..|+.++-+.++++.+..+..+
T Consensus 310 v~--~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 310 VY--QDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINIR 365 (373)
T ss_pred Ee--cCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHh
Confidence 44 5999999999999999999999999999999 4899999999999998886655
No 170
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.95 E-value=2e-05 Score=86.18 Aligned_cols=70 Identities=16% Similarity=0.231 Sum_probs=56.8
Q ss_pred EEEEeCCCCCCCCchhh---HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEE
Q 001492 779 VIALDCYDSKGAPDKKM---IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i---~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~ 855 (1067)
+|++|+||||.++++++ ++.+.++|++|+++| + .++|+|+++...+...++.+|+. .-|+.+|| +|....
T Consensus 128 vIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekG----i-kLaIaTS~~Re~v~~~L~~lGLd-~YFdvIIs-~Gdv~~ 200 (301)
T TIGR01684 128 VVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRG----C-ILVLWSYGDRDHVVESMRKVKLD-RYFDIIIS-GGHKAE 200 (301)
T ss_pred EEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCC----C-EEEEEECCCHHHHHHHHHHcCCC-cccCEEEE-CCcccc
Confidence 55669999998887765 699999999999997 7 79999999999999999999986 23554544 565543
No 171
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.95 E-value=2.2e-05 Score=76.24 Aligned_cols=56 Identities=11% Similarity=0.151 Sum_probs=44.1
Q ss_pred EEEEeCCCCCCCCch------hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHH---------------HHHHHHHhcC
Q 001492 779 VIALDCYDSKGAPDK------KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVS---------------ETIEFLNSMK 837 (1067)
Q Consensus 779 lia~DiDGTLl~~~~------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~---------------~~~~~l~~l~ 837 (1067)
+|++|+||||++.+. .+.+.++++|++++++| + .|+++|||+.. .+..||...+
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G----~-~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ 77 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALG----F-EIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHN 77 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCC----C-EEEEECCCCchhhhccccccchhhHHHHHHHHHHcC
Confidence 456699999876432 35678889999998886 6 79999999876 4568899988
Q ss_pred CC
Q 001492 838 IE 839 (1067)
Q Consensus 838 i~ 839 (1067)
++
T Consensus 78 ip 79 (126)
T TIGR01689 78 VP 79 (126)
T ss_pred CC
Confidence 86
No 172
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.94 E-value=0.0008 Score=76.29 Aligned_cols=274 Identities=16% Similarity=0.160 Sum_probs=170.9
Q ss_pred CCceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCC-hhhhhhHhHHHHhHHHhhcccccCCEEE
Q 001492 304 VWPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQS-KEDINSTYKIMRRIEGEELSLDAAELVI 381 (1067)
Q Consensus 304 ~~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~-~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi 381 (1067)
.+||+|..|.- .+..++++.+...++|+.+---++-. +... .++ +.|++ +-.-|+.-+
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt---------~~~~~PEE------~NR~l-----~~~~S~~hf 150 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT---------GDLYFPEE------INRRL-----TSHLSDLHF 150 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc---------CCCCCcHH------HHHHH-----HHHhhhhhc
Confidence 67999998875 45666688888889999887666511 1111 111 12222 345578889
Q ss_pred eCCHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCC-CCCCccCCCCCCccccccccccCCCCCCC
Q 001492 382 TSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGM-DFSNVVAQEDTPEVDGELTSLIGGTDGSS 460 (1067)
Q Consensus 382 ~~S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGi-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1067)
++|....+.+.+ .|+ +..+|.|+-|.+ |.-....... .
T Consensus 151 apte~ar~nLl~------------------EG~-----~~~~IfvtGnt~iDal~~~~~~~--------~---------- 189 (383)
T COG0381 151 APTEIARKNLLR------------------EGV-----PEKRIFVTGNTVIDALLNTRDRV--------L---------- 189 (383)
T ss_pred CChHHHHHHHHH------------------cCC-----CccceEEeCChHHHHHHHHHhhh--------c----------
Confidence 999887776633 233 334788887753 2211110000 0
Q ss_pred CCCcchhhHhhhhhccCCCCcEEEEEe-CCCCC-CCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHH
Q 001492 461 PKAIPAIWSDVMRFLTNPHKPMILALS-RPDPK-KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITV 538 (1067)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~Il~vg-Rld~~-Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i 538 (1067)
.... ....+....++++|+..+ |-.-. +++..+++|+.++. ...+++.+|....+.. .+.++
T Consensus 190 --~~~~---~~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~--~~~~~~~viyp~H~~~---------~v~e~ 253 (383)
T COG0381 190 --EDSK---ILAKGLDDKDKKYILVTAHRRENVGEPLEEICEALREIA--EEYPDVIVIYPVHPRP---------RVREL 253 (383)
T ss_pred --cchh---hHHhhhccccCcEEEEEcchhhcccccHHHHHHHHHHHH--HhCCCceEEEeCCCCh---------hhhHH
Confidence 0000 000112334555655544 44333 89999999999885 4457888888877631 12222
Q ss_pred HHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CchhhhccCCce
Q 001492 539 LKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG-GPVDIHRALNNG 617 (1067)
Q Consensus 539 ~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~G-g~~eiv~~~~~G 617 (1067)
. ...++-.++|.+...+...+...++..| .++++ -.|-..-||-..|+||+.-..+ .-+|-+.. ..-
T Consensus 254 ~--~~~L~~~~~v~li~pl~~~~f~~L~~~a-----~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~a-gt~ 321 (383)
T COG0381 254 V--LKRLKNVERVKLIDPLGYLDFHNLMKNA-----FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEA-GTN 321 (383)
T ss_pred H--HHHhCCCCcEEEeCCcchHHHHHHHHhc-----eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceec-Cce
Confidence 2 3566666789999999999999999999 45555 3466778999999999986643 33455543 345
Q ss_pred EEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 001492 618 LLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAA 671 (1067)
Q Consensus 618 llv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 671 (1067)
.+|. .|.+.+.+++.+++++++..++|++..- .|.=...++++.+.+..
T Consensus 322 ~lvg-~~~~~i~~~~~~ll~~~~~~~~m~~~~n----pYgdg~as~rIv~~l~~ 370 (383)
T COG0381 322 ILVG-TDEENILDAATELLEDEEFYERMSNAKN----PYGDGNASERIVEILLN 370 (383)
T ss_pred EEeC-ccHHHHHHHHHHHhhChHHHHHHhcccC----CCcCcchHHHHHHHHHH
Confidence 6665 4789999999999999998887754322 45444455566655553
No 173
>PRK10444 UMP phosphatase; Provisional
Probab=97.86 E-value=0.00028 Score=77.40 Aligned_cols=65 Identities=8% Similarity=0.022 Sum_probs=49.3
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHH---HHHhcCCCCCCCCEEEEcC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIE---FLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~---~l~~l~i~~~~~d~~I~~n 850 (1067)
+|++|+||||.+.+ ++.+.+.++|++|+++| + .|+++|+|+...... .|..+|++. +.+-++++.
T Consensus 3 ~v~~DlDGtL~~~~-~~~p~a~~~l~~L~~~g----~-~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts~ 70 (248)
T PRK10444 3 NVICDIDGVLMHDN-VAVPGAAEFLHRILDKG----L-PLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTSA 70 (248)
T ss_pred EEEEeCCCceEeCC-eeCccHHHHHHHHHHCC----C-eEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecHH
Confidence 45559999988875 67889999999999997 6 799999998865544 455567763 355566653
No 174
>PLN02208 glycosyltransferase family protein
Probab=97.82 E-value=0.028 Score=67.03 Aligned_cols=94 Identities=17% Similarity=0.113 Sum_probs=60.9
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhh-hccCCceEEeCC--
Q 001492 550 QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDI-HRALNNGLLVDP-- 622 (1067)
Q Consensus 550 ~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~ei-v~~~~~Gllv~p-- 622 (1067)
.+.+.++.|+.+ +++.. ..+.||.= +--++++||+++|+|+|+-..-+ ...+ +....-|+.++.
T Consensus 312 g~~v~~W~PQ~~---iL~H~--~v~~FvtH----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPL---ILDHP--SIGCFVNH----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHH---HhcCC--ccCeEEcc----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 466778888775 45554 11345521 22368999999999999976533 2222 333456777753
Q ss_pred ---CCHHHHHHHHHHhhcCH-HHHHHHHHHHHHH
Q 001492 623 ---HDQQAIADALLKLVSEK-NLWVECRKNGWKN 652 (1067)
Q Consensus 623 ---~d~~~la~aL~~ll~d~-~~~~~~~~~~~~~ 652 (1067)
-+.++++++|.++++++ +..+++++++++.
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~ 416 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKL 416 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 26789999999999875 4556666666544
No 175
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.78 E-value=0.002 Score=75.84 Aligned_cols=94 Identities=16% Similarity=0.182 Sum_probs=71.4
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhhccCCceEEeC
Q 001492 546 DLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALNNGLLVD 621 (1067)
Q Consensus 546 ~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv~~~~~Gllv~ 621 (1067)
++..++....++|+. +++..| |++|.. |--.+..||+.+|+|+|+-..+. ..+-++....|..+.
T Consensus 281 ~~p~n~~v~~~~p~~---~~l~~a----d~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~ 349 (406)
T COG1819 281 NVPDNVIVADYVPQL---ELLPRA----DAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALP 349 (406)
T ss_pred cCCCceEEecCCCHH---HHhhhc----CEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecC
Confidence 456688888887654 588999 999976 33458899999999999977653 234566667888776
Q ss_pred --CCCHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 001492 622 --PHDQQAIADALLKLVSEKNLWVECRKNGW 650 (1067)
Q Consensus 622 --p~d~~~la~aL~~ll~d~~~~~~~~~~~~ 650 (1067)
+.+.+.++++|.++|+++..++...+...
T Consensus 350 ~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~ 380 (406)
T COG1819 350 FEELTEERLRAAVNEVLADDSYRRAAERLAE 380 (406)
T ss_pred cccCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 68999999999999999886655444433
No 176
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.71 E-value=0.0063 Score=71.60 Aligned_cols=179 Identities=15% Similarity=0.128 Sum_probs=126.9
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCChhhhhccchHHHHHHHHHHHhcCCC-CcEE
Q 001492 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLY-GQVA 552 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~-~~V~ 552 (1067)
+.+++..+++++++ +.|-.+.+++-+-++ ++..|+-+| +.|++++ +++...++.++.+.|+. .+..
T Consensus 425 glp~~avVf~c~~n--~~K~~pev~~~wmqI--L~~vP~Svl~L~~~~~~--------~~~~~~l~~la~~~Gv~~eRL~ 492 (620)
T COG3914 425 GLPEDAVVFCCFNN--YFKITPEVFALWMQI--LSAVPNSVLLLKAGGDD--------AEINARLRDLAEREGVDSERLR 492 (620)
T ss_pred CCCCCeEEEEecCC--cccCCHHHHHHHHHH--HHhCCCcEEEEecCCCc--------HHHHHHHHHHHHHcCCChhhee
Confidence 44555544444444 567677777777666 466677554 6666653 56788999999999874 6899
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEc-------CCCCchhhhcc-CCceEEeCCCC
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT-------KNGGPVDIHRA-LNNGLLVDPHD 624 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat-------~~Gg~~eiv~~-~~~Gllv~p~d 624 (1067)
|.+..+.++-.+.|..| |+|+=+--+ +-..|.+||+-+|+|||+- .+|+. ++.. |..-++. .+
T Consensus 493 f~p~~~~~~h~a~~~iA----DlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA--~s 563 (620)
T COG3914 493 FLPPAPNEDHRARYGIA----DLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVA--DS 563 (620)
T ss_pred ecCCCCCHHHHHhhchh----heeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhc--CC
Confidence 99999999999999999 999966433 2357999999999999973 23432 3322 2233344 35
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHH-H--cCCHHHHHHHHHHHHHHhHh
Q 001492 625 QQAIADALLKLVSEKNLWVECRKNGWKNI-H--LFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 625 ~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~--~fsw~~~a~~~l~~~~~~~~ 674 (1067)
.++..+.=..+-.|..++++.+..-.+.. . .|+....++++..+|..+-.
T Consensus 564 ~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 564 RADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred HHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHH
Confidence 66666655566678888888777666655 2 79999999999999987654
No 177
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=97.66 E-value=9.5e-05 Score=77.47 Aligned_cols=186 Identities=16% Similarity=0.160 Sum_probs=95.0
Q ss_pred HHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCC-CCCCEEEEcCCceEEecCCCcccCCcCCCChhhhhccc
Q 001492 800 YDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEA-NEFDALICSSGGEMYYPGTYTEEGGKLFPDPDYASHID 878 (1067)
Q Consensus 800 ~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~-~~~d~~I~~nGa~I~~~~~~~~~~~~~~~d~~~~~~i~ 878 (1067)
+++|.+|++. + .|.|+||-.+.-+.+.+. +-.. ..||++-+.||...|..+ .......+..++
T Consensus 2 ~~~L~~L~~~-----~-~vgvVgGsd~~k~~eQl~--~~~~~~~fdy~f~enG~~~y~~~-------~~~~~~~~~~~l- 65 (220)
T PF03332_consen 2 AELLQKLRKK-----V-PVGVVGGSDLPKIQEQLG--GDDVLDNFDYVFPENGLVAYKNG-------ELIWSQSIAEFL- 65 (220)
T ss_dssp HHHHHHHHTT-----S-EEEEEESS-HHHHHHHHS--TTTHHHH-SEEEEGGGTEEEETT-------EEEEE--HHHHH-
T ss_pred HHHHHHHHhc-----C-eEEEEcchhHHHHHHHHc--ccchHhhCCeeecCCCCeEEECC-------CchhhHhHHHHc-
Confidence 4778888876 7 899999999988877764 1111 358999999999877653 111112222222
Q ss_pred cccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEe--cCCCchHH------------HHHHHHHHHh
Q 001492 879 YRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLI--KDPSKARR------------IDDLRQKLRM 944 (1067)
Q Consensus 879 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~--~~~~~~~~------------~~el~~~L~~ 944 (1067)
..+.+++.+.-+.....+... ......++|.-.. .+.|.. .......+ -+.+.+.|+.
T Consensus 66 ---gee~~~~~in~~l~~~~~l~l-p~krGtfIE~R~g----mIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~ 137 (220)
T PF03332_consen 66 ---GEEKLQKLINFCLRYISDLDL-PVKRGTFIEFRGG----MINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKK 137 (220)
T ss_dssp ---HHHHHHHHHHHHHHHHHT----S---S-SEEEESS----EEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHHHhCCC-CccCCCceeecCC----cEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHH
Confidence 223333322221111111100 0001122222111 222211 11111111 1234444544
Q ss_pred cCCcEEEE-EeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCCCChhhhhcCC-ceEEEeCCC
Q 001492 945 RGLRCHPM-YCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGE----SGDTDYEELISGA-HKTLIMKGV 1015 (1067)
Q Consensus 945 ~~~~~~v~-~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGD----s~N~D~~eML~~a-g~gVaMgNA 1015 (1067)
....+.+. ...+.+.+||.|+|.+|..+|++|.+.. .+ .|.|||| ++| | .+.+... -+|+.+.|=
T Consensus 138 ~f~d~~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~---~~-~I~FfGDkt~pGGN-D-yei~~~~rt~g~~V~~p 208 (220)
T PF03332_consen 138 EFPDFGLTFSIGGQISIDVFPKGWDKTYCLRHLEDEG---FD-EIHFFGDKTFPGGN-D-YEIFEDPRTIGHTVTSP 208 (220)
T ss_dssp HTCCCSEEEEEETTTEEEEEETT-SGGGGGGGTTTTT----S-EEEEEESS-STTST-T-HHHHHSTTSEEEE-SSH
T ss_pred HCCCCceEEecCCceEEccccCCccHHHHHHHHHhcc---cc-eEEEEehhccCCCC-C-ceeeecCCccEEEeCCH
Confidence 44443333 3344568999999999999999997743 34 4555999 689 9 7887654 457777653
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.64 E-value=0.00017 Score=79.65 Aligned_cols=66 Identities=15% Similarity=0.117 Sum_probs=51.0
Q ss_pred EEEEeCCCCCCCCch---hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHH---HHHHHHHhcCCCCCCCCEEEEcC
Q 001492 779 VIALDCYDSKGAPDK---KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVS---ETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 779 lia~DiDGTLl~~~~---~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~---~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+|++|+||||.+.+. .+.+.+.++|++|+++| + .|+++|||+.. .+...+..+|++. .++-++++.
T Consensus 3 ~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G----~-~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts~ 74 (257)
T TIGR01458 3 GVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGAS----V-KVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTPA 74 (257)
T ss_pred EEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCC----C-eEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcHH
Confidence 344599999877654 27789999999999997 7 89999997655 4777888888874 456667654
No 179
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.63 E-value=0.00014 Score=79.83 Aligned_cols=70 Identities=20% Similarity=0.286 Sum_probs=56.0
Q ss_pred EEEEeCCCCCCCCchhh---HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCceEE
Q 001492 779 VIALDCYDSKGAPDKKM---IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i---~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~I~ 855 (1067)
+|++|+||||.++++++ ++.+.++|++|+++| + .++|+|+.+...+...++.+++. ..||.+|| +|....
T Consensus 130 ~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekG----i-kLaIvTNg~Re~v~~~Le~lgL~-~yFDvII~-~g~i~~ 202 (303)
T PHA03398 130 VIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERG----C-VLVLWSYGNREHVVHSLKETKLE-GYFDIIIC-GGRKAG 202 (303)
T ss_pred EEEEecCCCccCCCCccccCChhHHHHHHHHHHCC----C-EEEEEcCCChHHHHHHHHHcCCC-ccccEEEE-CCCccc
Confidence 44559999999987777 799999999999997 7 79999988888889999999986 34565555 555443
No 180
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.61 E-value=0.00044 Score=77.40 Aligned_cols=65 Identities=9% Similarity=0.028 Sum_probs=46.7
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCC---HHHHHHHHHhcCCCCCCCCEEEEcC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP---VSETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~---~~~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+|++|+||||.+.+..+ +.+.++|++|+++| + .|+++|+|+ ...+...++.+|++. .++-++++.
T Consensus 4 ~~~~D~DGtl~~~~~~~-~ga~e~l~~L~~~g----~-~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts~ 71 (279)
T TIGR01452 4 GFIFDCDGVLWLGERVV-PGAPELLDRLARAG----K-AALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSSA 71 (279)
T ss_pred EEEEeCCCceEcCCeeC-cCHHHHHHHHHHCC----C-eEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecHH
Confidence 34449999988765444 45999999999987 7 899999976 445556677888763 344455543
No 181
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.55 E-value=0.31 Score=59.01 Aligned_cols=140 Identities=15% Similarity=0.174 Sum_probs=75.9
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 479 HKPMILALSRPDP--KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 479 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
+..+++++|.... .+.+..++++++.+. ..+..+++......+.... +-..+.... . ..++...++
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-----~~flw~~~~~~~~~~~~~~---lp~~~~~r~---~-~~g~~v~~w 352 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGSG-----QNFIWVVRKNENQGEKEEW---LPEGFEERT---K-GKGLIIRGW 352 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHCC-----CCEEEEEecCCcccchhhc---CCHHHHHHh---c-cCCEEEecC
Confidence 4567788887643 345666666666552 2454566642110000000 001111111 1 246788899
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCch----hhh-ccCCceEEe--------C--
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPV----DIH-RALNNGLLV--------D-- 621 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~----eiv-~~~~~Gllv--------~-- 621 (1067)
.|+. +++..++ .+.||.= -| -.+++||+++|+|+|+-...+=+ ..+ +...-|+-+ +
T Consensus 353 ~PQ~---~iL~h~~--v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~ 423 (482)
T PLN03007 353 APQV---LILDHQA--TGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGD 423 (482)
T ss_pred CCHH---HHhccCc--cceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccC
Confidence 8875 5666661 1235532 23 35889999999999997653321 111 111223332 1
Q ss_pred CCCHHHHHHHHHHhhcCH
Q 001492 622 PHDQQAIADALLKLVSEK 639 (1067)
Q Consensus 622 p~d~~~la~aL~~ll~d~ 639 (1067)
.-+.+++++++.+++.++
T Consensus 424 ~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 424 FISREKVEKAVREVIVGE 441 (482)
T ss_pred cccHHHHHHHHHHHhcCc
Confidence 137789999999999875
No 182
>PLN02562 UDP-glycosyltransferase
Probab=97.48 E-value=0.11 Score=62.21 Aligned_cols=139 Identities=12% Similarity=0.117 Sum_probs=81.3
Q ss_pred CCcEEEEEeCCC---CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCC
Q 001492 479 HKPMILALSRPD---PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPK 555 (1067)
Q Consensus 479 ~~~~Il~vgRld---~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g 555 (1067)
+..++++.|... +.+-+..++.+++.+. . .+..++..+.. +.+. . ...++ ..+++.+.+
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~-------~---~~~~~--~~~~~~v~~ 334 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLP-------P---GYVER--VSKQGKVVS 334 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCC-------H---HHHHH--hccCEEEEe
Confidence 345778888853 4456777777777762 1 23334432110 0111 0 11111 124677778
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhcc-CCceEEeCCCCHHHHHH
Q 001492 556 HHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRA-LNNGLLVDPHDQQAIAD 630 (1067)
Q Consensus 556 ~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~p~d~~~la~ 630 (1067)
+.|+.+ ++...+ .++||.= +--.+.+||+.+|+|+|+-...+= ...+.+ ...|+-+..-+.+++++
T Consensus 335 w~PQ~~---iL~h~~--v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~ 405 (448)
T PLN02562 335 WAPQLE---VLKHQA--VGCYLTH----CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEE 405 (448)
T ss_pred cCCHHH---HhCCCc--cceEEec----CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHH
Confidence 887765 454440 0345522 234689999999999999765432 223322 34577665568899999
Q ss_pred HHHHhhcCHHHHHH
Q 001492 631 ALLKLVSEKNLWVE 644 (1067)
Q Consensus 631 aL~~ll~d~~~~~~ 644 (1067)
+|.+++.+++.+++
T Consensus 406 ~v~~~l~~~~~r~~ 419 (448)
T PLN02562 406 GLRKVMEDSGMGER 419 (448)
T ss_pred HHHHHhCCHHHHHH
Confidence 99999988755443
No 183
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.46 E-value=0.26 Score=58.95 Aligned_cols=92 Identities=21% Similarity=0.266 Sum_probs=58.1
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhccC-CceEEe-CC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRAL-NNGLLV-DP 622 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~~-~~Gllv-~p 622 (1067)
++....++.|+.+ ++... ..+.||.- -|+ .+++||+++|+|+|+-...+= ...+.+. ..|+-+ ..
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~--~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKE---VLSHP--AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHH---HhCCC--ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 4556668988775 45543 01456633 233 588999999999999765332 2233222 467666 33
Q ss_pred CCHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 001492 623 HDQQAIADALLKLVSEKNLWVECRKNGW 650 (1067)
Q Consensus 623 ~d~~~la~aL~~ll~d~~~~~~~~~~~~ 650 (1067)
-+.++++++|++++.+++ ..+++++++
T Consensus 395 ~~~~~v~~av~~lm~~~~-~~~~r~~a~ 421 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE-GEEMRKRAI 421 (451)
T ss_pred ccHHHHHHHHHHHHcCCc-HHHHHHHHH
Confidence 477899999999998764 334444443
No 184
>PLN02670 transferase, transferring glycosyl groups
Probab=97.46 E-value=0.23 Score=59.63 Aligned_cols=112 Identities=11% Similarity=0.021 Sum_probs=70.6
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhhccCCceEEeCC----
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALNNGLLVDP---- 622 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv~~~~~Gllv~p---- 622 (1067)
+.+.++.|+.+ ++...+ .+.||.= +--.+++||+++|+|+|+-...+ ....+.....|+.++.
T Consensus 341 ~vv~~W~PQ~~---IL~H~~--v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~ 411 (472)
T PLN02670 341 MIHVGWVPQVK---ILSHES--VGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD 411 (472)
T ss_pred eEEeCcCCHHH---HhcCcc--cceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC
Confidence 56678888765 454441 1346532 23468999999999999976533 2233444567887753
Q ss_pred --CCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHh
Q 001492 623 --HDQQAIADALLKLVSEKNLWVECRKNGWKNIH----LFSWPEHCRTYLTRVAAC 672 (1067)
Q Consensus 623 --~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~----~fsw~~~a~~~l~~~~~~ 672 (1067)
-+.++++++|.+++.+++ -.++++++++..+ .=.-.+.++.+.+.+.+.
T Consensus 412 ~~~~~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 412 GSFTSDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred CcCcHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 358899999999998752 2345555554443 344556666666665544
No 185
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=97.41 E-value=0.33 Score=58.44 Aligned_cols=81 Identities=20% Similarity=0.183 Sum_probs=54.5
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhh-ccCCceEEeCC--
Q 001492 550 QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIH-RALNNGLLVDP-- 622 (1067)
Q Consensus 550 ~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv-~~~~~Gllv~p-- 622 (1067)
.+.+.++.|+.+ ++...+ .+.||.- +--.+++||+.+|+|+|+-...+= ...+ .....|+.++.
T Consensus 339 g~vv~~W~PQ~~---iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVPSWAPQAE---ILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEeecCCHHH---HhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 477788988765 455541 1335532 334689999999999999875442 2233 34456777743
Q ss_pred --CCHHHHHHHHHHhhcCH
Q 001492 623 --HDQQAIADALLKLVSEK 639 (1067)
Q Consensus 623 --~d~~~la~aL~~ll~d~ 639 (1067)
-+.++++++|.+++.++
T Consensus 410 ~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 410 EVISRSKIEALVRKVMVEE 428 (481)
T ss_pred CcccHHHHHHHHHHHhcCC
Confidence 37789999999999764
No 186
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=97.37 E-value=0.055 Score=60.44 Aligned_cols=339 Identities=17% Similarity=0.146 Sum_probs=169.7
Q ss_pred CceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcC--CCeeEEEEEecCCCCCCCCCcCCCcccccCCCCC
Q 001492 164 KKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARM--PGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPE 241 (1067)
Q Consensus 164 ~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~--G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~ 241 (1067)
+.+||+|.|.|-+ |- |.-+....+|++|.+. | .+|.++|....-+..+
T Consensus 8 ~~~Ri~~Yshd~~--------Gl-----GHlrR~~~Ia~aLv~d~~~--~~Il~IsG~~~~~~F~--------------- 57 (400)
T COG4671 8 KRPRILFYSHDLL--------GL-----GHLRRALRIAHALVEDYLG--FDILIISGGPPAGGFP--------------- 57 (400)
T ss_pred ccceEEEEehhhc--------cc-----hHHHHHHHHHHHHhhcccC--ceEEEEeCCCccCCCC---------------
Confidence 4569999996553 32 8889999999999998 8 9999999854322221
Q ss_pred CCCccccccCCeEEEeccCCCCc--cCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchh--
Q 001492 242 DDGIEVGESSGAYIIRIPFGPRD--KYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAG-- 317 (1067)
Q Consensus 242 ~~~~~~~~~~gv~i~ri~~~~~~--~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~-- 317 (1067)
...|+..+.+|+-... .......+-..+.++.. +-.++... .+ +.++|||+.......|
T Consensus 58 -------~~~gVd~V~LPsl~k~~~G~~~~~d~~~~l~e~~~----~Rs~lil~---t~---~~fkPDi~IVd~~P~Glr 120 (400)
T COG4671 58 -------GPAGVDFVKLPSLIKGDNGEYGLVDLDGDLEETKK----LRSQLILS---TA---ETFKPDIFIVDKFPFGLR 120 (400)
T ss_pred -------CcccCceEecCceEecCCCceeeeecCCCHHHHHH----HHHHHHHH---HH---HhcCCCEEEEeccccchh
Confidence 1248899999873220 11111111112333322 11121111 11 1378999998765332
Q ss_pred -HHHHHHH--hcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhh
Q 001492 318 -DSAALLS--GALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGL 394 (1067)
Q Consensus 318 -~~a~~l~--~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~ 394 (1067)
.+...+. +..+.+.|.-..++-.. .+.... -.++-+.++.+-+..|.|.+...-........
T Consensus 121 ~EL~ptL~yl~~~~t~~vL~lr~i~D~--p~~~~~-------------~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~ 185 (400)
T COG4671 121 FELLPTLEYLKTTGTRLVLGLRSIRDI--PQELEA-------------DWRRAETVRLINRFYDLVLVYGDPDFYDPLTE 185 (400)
T ss_pred hhhhHHHHHHhhcCCcceeehHhhhhc--hhhhcc-------------chhhhHHHHHHHHhheEEEEecCccccChhhc
Confidence 1112221 12244555655554111 011000 01111223334566788888765444443333
Q ss_pred cCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCCcchhhHhhhhh
Q 001492 395 YDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRF 474 (1067)
Q Consensus 395 y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1067)
|+- .+.+ +-.+.+-|.= +.-.+.. +.|+-+
T Consensus 186 ~~~-~~~i--------------------~~k~~ytG~v-q~~~~~~----------------------~~p~~~------ 215 (400)
T COG4671 186 FPF-APAI--------------------RAKMRYTGFV-QRSLPHL----------------------PLPPHE------ 215 (400)
T ss_pred CCc-cHhh--------------------hhheeEeEEe-eccCcCC----------------------CCCCcC------
Confidence 332 1221 1223333321 1101111 001000
Q ss_pred ccCCCCcEEEEEeCC-CCCCCHHHHHHHHHhcccccCCC-cEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 475 LTNPHKPMILALSRP-DPKKNITTLLKAFGECRPLRELA-NLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRl-d~~Kgi~~ll~A~~~l~~l~~~~-~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
.+....+++++|.= +...=+...+.|...+. +.. ..++|.|.-- . . ...+++.....-.++|.
T Consensus 216 -~pE~~~Ilvs~GGG~dG~eLi~~~l~A~~~l~---~l~~~~~ivtGP~M-----P---~---~~r~~l~~~A~~~p~i~ 280 (400)
T COG4671 216 -APEGFDILVSVGGGADGAELIETALAAAQLLA---GLNHKWLIVTGPFM-----P---E---AQRQKLLASAPKRPHIS 280 (400)
T ss_pred -CCccceEEEecCCChhhHHHHHHHHHHhhhCC---CCCcceEEEeCCCC-----C---H---HHHHHHHHhcccCCCeE
Confidence 02345567777752 22223334444444433 222 2555655431 1 1 22334444444446777
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchh--hhccC---CceE--EeCCC--
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVD--IHRAL---NNGL--LVDPH-- 623 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~e--iv~~~---~~Gl--lv~p~-- 623 (1067)
...+ ..++..|+..| +..|.= -|+ .|..|-+.+|+|-+.-..+.+.+ +++.. .-|+ +..|.
T Consensus 281 I~~f--~~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~l 350 (400)
T COG4671 281 IFEF--RNDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENL 350 (400)
T ss_pred EEEh--hhhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccC
Confidence 7777 78999999999 777732 233 47789999999988876554433 22210 1122 12232
Q ss_pred CHHHHHHHHHHhhcCH
Q 001492 624 DQQAIADALLKLVSEK 639 (1067)
Q Consensus 624 d~~~la~aL~~ll~d~ 639 (1067)
.++.+|++|..+++-|
T Consensus 351 t~~~La~al~~~l~~P 366 (400)
T COG4671 351 TPQNLADALKAALARP 366 (400)
T ss_pred ChHHHHHHHHhcccCC
Confidence 4677888888888743
No 187
>PLN00414 glycosyltransferase family protein
Probab=97.32 E-value=0.49 Score=56.61 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=61.3
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhh-ccCCceEEeCC---
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RALNNGLLVDP--- 622 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~p--- 622 (1067)
..+.++.|+.+ ++..+ ..+.||.- +--.+++||+++|+|+|+-...+ ....+ +....|+.+..
T Consensus 314 ~vv~~w~PQ~~---vL~h~--~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPL---ILSHP--SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHH---HhcCC--ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 44567887765 44444 11456632 33468999999999999976533 22233 34566777742
Q ss_pred --CCHHHHHHHHHHhhcCH-HHHHHHHHHHHHHH
Q 001492 623 --HDQQAIADALLKLVSEK-NLWVECRKNGWKNI 653 (1067)
Q Consensus 623 --~d~~~la~aL~~ll~d~-~~~~~~~~~~~~~~ 653 (1067)
-+.+++++++.+++.++ +..+++++++++..
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~ 418 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLK 418 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Confidence 37889999999999864 45566666666543
No 188
>PLN02173 UDP-glucosyl transferase family protein
Probab=97.32 E-value=0.67 Score=55.37 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=59.2
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhcc-CCceEEeCC-
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRA-LNNGLLVDP- 622 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~p- 622 (1067)
+++.+.++.|+.+ ++... ..+.||.- +-.++++||+++|+|+|+-..-+= ...+.+ -..|+-+..
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4577779988654 55554 11355532 334799999999999999765332 223332 245666532
Q ss_pred -----CCHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 001492 623 -----HDQQAIADALLKLVSEKNLWVECRKNGWK 651 (1067)
Q Consensus 623 -----~d~~~la~aL~~ll~d~~~~~~~~~~~~~ 651 (1067)
-+.+++++++.+++.+++ .+++++++++
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGEK-SKEMKENAGK 420 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCCh-HHHHHHHHHH
Confidence 167999999999998743 3455555443
No 189
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.30 E-value=0.54 Score=55.77 Aligned_cols=90 Identities=10% Similarity=0.093 Sum_probs=56.8
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC-CchhhhccC-CceEEeC--CCCHHHHH
Q 001492 554 PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG-GPVDIHRAL-NNGLLVD--PHDQQAIA 629 (1067)
Q Consensus 554 ~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~G-g~~eiv~~~-~~Gllv~--p~d~~~la 629 (1067)
....+..++..+++.| |++|-.-+ -.++=|+++|+|+|+-... =...+++.. ...++++ .-+.+++.
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li 383 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQ 383 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHH
Confidence 3334456788999999 99884322 2678899999999996531 122222221 2234444 34567899
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHH
Q 001492 630 DALLKLVSEKNLWVECRKNGWKN 652 (1067)
Q Consensus 630 ~aL~~ll~d~~~~~~~~~~~~~~ 652 (1067)
+.+.+++++.+..++.-+.....
T Consensus 384 ~~v~~~~~~r~~~~~~l~~~v~~ 406 (426)
T PRK10017 384 AMVADTLGQLPALNARLAEAVSR 406 (426)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHH
Confidence 99999999877655544333333
No 190
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.21 E-value=0.85 Score=55.06 Aligned_cols=137 Identities=15% Similarity=0.171 Sum_probs=75.2
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCChh-hhhccchHHHHHHHHHHHhcCCCCcEEeCC
Q 001492 479 HKPMILALSRPDP--KKNITTLLKAFGECRPLRELANLTLIMGNRDDIE-EMSSGNASVLITVLKLIDKYDLYGQVAYPK 555 (1067)
Q Consensus 479 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~-~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g 555 (1067)
+..+.++.|.+.. .+-+..++.+++.+. ..+.++++...+.. ... .....+.+... ...+...+
T Consensus 283 ~svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~~~----~lp~~~~~r~~----~~g~~v~~ 349 (477)
T PLN02863 283 HKVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESDYS----NIPSGFEDRVA----GRGLVIRG 349 (477)
T ss_pred CceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccchh----hCCHHHHHHhc----cCCEEecC
Confidence 3456677887642 234666666666552 23444665322110 000 00111111111 23577778
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhh-hccCCceEEeC-----CCCH
Q 001492 556 HHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDI-HRALNNGLLVD-----PHDQ 625 (1067)
Q Consensus 556 ~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~ei-v~~~~~Gllv~-----p~d~ 625 (1067)
+.|+. +++... +.++||.- -| -.+++||+++|+|+|+-...+ .... ++.-..|+.+. .-+.
T Consensus 350 w~PQ~---~vL~h~--~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~ 420 (477)
T PLN02863 350 WAPQV---AILSHR--AVGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDS 420 (477)
T ss_pred CCCHH---HHhcCC--CcCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCH
Confidence 98864 455552 12677743 23 358899999999999976433 2222 33335676662 1267
Q ss_pred HHHHHHHHHhhc
Q 001492 626 QAIADALLKLVS 637 (1067)
Q Consensus 626 ~~la~aL~~ll~ 637 (1067)
+++++++.+++.
T Consensus 421 ~~v~~~v~~~m~ 432 (477)
T PLN02863 421 DELARVFMESVS 432 (477)
T ss_pred HHHHHHHHHHhh
Confidence 899999999883
No 191
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=97.20 E-value=0.011 Score=65.42 Aligned_cols=85 Identities=19% Similarity=0.127 Sum_probs=57.3
Q ss_pred CceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCch-hhHHHHHhhCCC--ChhhhhhHhHHHHhHHHhhcccccCCEE
Q 001492 305 WPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGR-NKLEQLLKQGRQ--SKEDINSTYKIMRRIEGEELSLDAAELV 380 (1067)
Q Consensus 305 ~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~-~~~~~l~~~g~~--~~~~i~~~y~~~~ri~~E~~~l~~Ad~V 380 (1067)
+.||+|+... .++.+++.++...|+|+++|-|+.+. +....++...++ ...-.....+++..+ -+.+++.||.|
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~I 249 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADRI 249 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCee
Confidence 4699999876 78999999999999999999999854 333444444443 111111122223322 46689999999
Q ss_pred EeCCHHHHHHH
Q 001492 381 ITSTKQEIDEQ 391 (1067)
Q Consensus 381 i~~S~~~~~~~ 391 (1067)
++..+.-.+.|
T Consensus 250 ~~l~~~n~~~q 260 (268)
T PF11997_consen 250 TPLYEYNREWQ 260 (268)
T ss_pred cccchhhHHHH
Confidence 99998654444
No 192
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.15 E-value=0.042 Score=63.69 Aligned_cols=145 Identities=19% Similarity=0.279 Sum_probs=90.4
Q ss_pred cCCCCcEEEEE-e-CCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 476 TNPHKPMILAL-S-RPDP-KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 476 ~~~~~~~Il~v-g-Rld~-~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
.++++++|..+ | |-.. ++.++.+++++..+. ...|++.+++..-+.. ....+.......+..-.+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~--~~~p~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLK--KQRPDLQFVVPVAPEV---------HEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHH--HhCCCeEEEEecCCHH---------HHHHHHHHHHhhCCCCeEE
Confidence 45667765443 3 4433 467799999999995 5678888877765421 1122333444433322232
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCch-h-----hhccCC-----------
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPV-D-----IHRALN----------- 615 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~-e-----iv~~~~----------- 615 (1067)
.. ..+-.+.++.| |+.+..| |.+.+|++.+|+|+|..--..+- - +++-..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34677899999 9988774 99999999999999875432221 1 111000
Q ss_pred --ceEEeCCCCHHHHHHHHHHhhcCHHHHHH
Q 001492 616 --NGLLVDPHDQQAIADALLKLVSEKNLWVE 644 (1067)
Q Consensus 616 --~Gllv~p~d~~~la~aL~~ll~d~~~~~~ 644 (1067)
.-++-+.-+++.++.++..+++|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 01222345889999999999999876443
No 193
>PLN00164 glucosyltransferase; Provisional
Probab=97.14 E-value=0.79 Score=55.41 Aligned_cols=93 Identities=16% Similarity=0.191 Sum_probs=57.6
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chh-hhccCCceEEeCC---
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVD-IHRALNNGLLVDP--- 622 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~e-iv~~~~~Gllv~p--- 622 (1067)
+.+.++.|+.+ ++...+ .+.||.= -|+ .+++||+++|+|+|+-..-+ ... +++....|+.++.
T Consensus 341 ~~v~~w~PQ~~---iL~h~~--vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 341 LVWPTWAPQKE---ILAHAA--VGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred eEEeecCCHHH---HhcCcc--cCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 55667877654 455541 1345532 233 48899999999999976432 222 2344466777642
Q ss_pred ----CCHHHHHHHHHHhhcCHH-HHHHHHHHHHHH
Q 001492 623 ----HDQQAIADALLKLVSEKN-LWVECRKNGWKN 652 (1067)
Q Consensus 623 ----~d~~~la~aL~~ll~d~~-~~~~~~~~~~~~ 652 (1067)
-+.++++++|.+++.+++ ..+++++++.+.
T Consensus 412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~ 446 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEM 446 (480)
T ss_pred cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 257899999999998653 344555554443
No 194
>PLN02764 glycosyltransferase family protein
Probab=97.12 E-value=0.68 Score=55.28 Aligned_cols=93 Identities=15% Similarity=0.110 Sum_probs=60.9
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhh-ccCCceEEeCC---
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIH-RALNNGLLVDP--- 622 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv-~~~~~Gllv~p--- 622 (1067)
+...++.|+.+| ++.. ..++||.- +-..+++||+++|+|+|+-...+= ...+ +....|+-+.+
T Consensus 319 ~v~~~W~PQ~~v---L~h~--~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPLI---LSHP--SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHHH---hcCc--ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 566688887754 4443 11557632 334689999999999999876442 2233 33345665532
Q ss_pred --CCHHHHHHHHHHhhcCH-HHHHHHHHHHHHH
Q 001492 623 --HDQQAIADALLKLVSEK-NLWVECRKNGWKN 652 (1067)
Q Consensus 623 --~d~~~la~aL~~ll~d~-~~~~~~~~~~~~~ 652 (1067)
-+.+++.+++.++++++ +..+++++++++.
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~ 422 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKW 422 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 27789999999999875 4556666666554
No 195
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.11 E-value=0.0041 Score=63.77 Aligned_cols=149 Identities=17% Similarity=0.218 Sum_probs=77.1
Q ss_pred CCeEEEeccCCCCccCcccccccchhHHHHHHHHHH--HHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcC-
Q 001492 251 SGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAH--CLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGAL- 327 (1067)
Q Consensus 251 ~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~--~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~- 327 (1067)
+||++++....+ ......-|+...|...+++. ..+....|++ +++.||||.+|... | -+.++...+
T Consensus 19 ~GV~~~~y~~~~----~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~-----~Gf~PDvI~~H~GW-G-e~Lflkdv~P 87 (171)
T PF12000_consen 19 PGVRVVRYRPPR----GPTPGTHPYVRDFEAAVLRGQAVARAARQLRA-----QGFVPDVIIAHPGW-G-ETLFLKDVFP 87 (171)
T ss_pred CCcEEEEeCCCC----CCCCCCCcccccHHHHHHHHHHHHHHHHHHHH-----cCCCCCEEEEcCCc-c-hhhhHHHhCC
Confidence 488888775422 22344556666666555442 2223333443 24789999999742 1 123445544
Q ss_pred CCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCCHHHHHHHHhhcCCCchHHHHHHH
Q 001492 328 NVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLR 407 (1067)
Q Consensus 328 giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S~~~~~~~~~~y~~~~~~l~~~l~ 407 (1067)
++|++..+--++........-....+. ......++..+-..--..+..||..+++|...... | ++.+
T Consensus 88 ~a~li~Y~E~~y~~~g~d~~FDpe~p~-~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~----f---P~~~----- 154 (171)
T PF12000_consen 88 DAPLIGYFEFYYRASGADVGFDPEFPP-SLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQ----F---PAEF----- 154 (171)
T ss_pred CCcEEEEEEEEecCCCCcCCCCCCCCC-CHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHh----C---CHHH-----
Confidence 788875443221111000000000000 11222222212122345688999999999865443 2 3221
Q ss_pred HHHhcCcccCCCCCCCEEEeCCCCCCCCc
Q 001492 408 ARARRGVNCHGRYMPRMVVIPPGMDFSNV 436 (1067)
Q Consensus 408 ~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f 436 (1067)
.+||.||+-|||++.+
T Consensus 155 -------------r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 155 -------------RSKISVIHDGIDTDRF 170 (171)
T ss_pred -------------HcCcEEeecccchhhc
Confidence 1399999999999865
No 196
>PLN02554 UDP-glycosyltransferase family protein
Probab=97.10 E-value=1.2 Score=54.08 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=54.3
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----ch-hhhccCCceEEeCC-
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PV-DIHRALNNGLLVDP- 622 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~-eiv~~~~~Gllv~p- 622 (1067)
+++.+.++.|+.+ +++.. +.+.||.= -| -.+++||+.+|+|+|+-...+ .. .+++....|+.++.
T Consensus 342 ~~g~v~~W~PQ~~---iL~H~--~v~~FvtH---~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIGWAPQVA---VLAKP--AIGGFVTH---CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEeeCCHHH---HhCCc--ccCccccc---Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 4566668887654 44322 11556622 23 358899999999999976533 12 33444456776631
Q ss_pred ------------CCHHHHHHHHHHhhc-CHHHHH
Q 001492 623 ------------HDQQAIADALLKLVS-EKNLWV 643 (1067)
Q Consensus 623 ------------~d~~~la~aL~~ll~-d~~~~~ 643 (1067)
-+.++++++|.+++. +++.++
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~ 446 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRK 446 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhcCCHHHHH
Confidence 267899999999996 544333
No 197
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.01 E-value=0.21 Score=55.14 Aligned_cols=136 Identities=17% Similarity=0.229 Sum_probs=77.6
Q ss_pred hhhhhccCCCCcEEEE-E-----eCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHH
Q 001492 470 DVMRFLTNPHKPMILA-L-----SRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLID 543 (1067)
Q Consensus 470 ~~~~~~~~~~~~~Il~-v-----gRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~ 543 (1067)
.+++++...+.++|+. . .-....+++..+.+.+..+.+ .+ +|+=.++.. ..+.+.
T Consensus 172 vlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k---~g---iV~ipr~~~-------------~~eife 232 (346)
T COG1817 172 VLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK---YG---IVLIPREKE-------------QAEIFE 232 (346)
T ss_pred HHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---Cc---EEEecCchh-------------HHHHHh
Confidence 3444555555555543 1 112346788788888888843 33 333344321 123333
Q ss_pred hcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCC---CchhhhccCCceEEe
Q 001492 544 KYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNG---GPVDIHRALNNGLLV 620 (1067)
Q Consensus 544 ~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~G---g~~eiv~~~~~Gllv 620 (1067)
.+. ++..+... .+.+.-+|.+. .++ .+-|.-.-||+..|+|.|++..| +..+... ..|+++
T Consensus 233 ~~~---n~i~pk~~-vD~l~Llyya~-----lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~ 296 (346)
T COG1817 233 GYR---NIIIPKKA-VDTLSLLYYAT-----LVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY 296 (346)
T ss_pred hhc---cccCCccc-ccHHHHHhhhh-----eee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee
Confidence 332 23333221 22244444443 544 24466679999999999999865 3333332 469999
Q ss_pred CCCCHHHHHHHHHHhhcCHH
Q 001492 621 DPHDQQAIADALLKLVSEKN 640 (1067)
Q Consensus 621 ~p~d~~~la~aL~~ll~d~~ 640 (1067)
+..|+.++.+...+++.++.
T Consensus 297 ~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 297 HSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred ecCCHHHHHHHHHHHhhchh
Confidence 98898887777777777664
No 198
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.98 E-value=0.00032 Score=69.01 Aligned_cols=54 Identities=11% Similarity=0.108 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhccc
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~ 1027 (1067)
+|-.+...|+++++++++++.. +||+.| | +++|+.+|.++|+.+|+ ++++.+++
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~dAh---~~v~~~a~ 136 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVADAH---PLLKQRAD 136 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCcccccccC---HHHHHhhH
Confidence 6899999999999999999977 999999 9 99999999999999999 77777877
No 199
>PF08550 DUF1752: Fungal protein of unknown function (DUF1752); InterPro: IPR013860 This entry represents fungal proteins of unknown function. This short section domain is bounded by two highly conserved tryptophans. The entry contains P34072 from SWISSPROT that is thought to be a negative regulator of RAS-cAMP pathway in S. cerevisiae and the S. pombe member is a GAF1 transcription factor Q10280 from SWISSPROT that is also associated with the zinc finger family GATA PF00320 from PFAM.
Probab=96.89 E-value=0.00042 Score=48.82 Aligned_cols=24 Identities=29% Similarity=0.808 Sum_probs=18.0
Q ss_pred HHhcchhhhhhhhhhhhHHHHHhh
Q 001492 66 VATRNTRERSSRLENMCWRIWHLT 89 (1067)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1067)
+.++..-+=..||||++||+|+.+
T Consensus 6 ~~~k~~l~~~~RLeN~sWR~w~~~ 29 (29)
T PF08550_consen 6 TKCKDSLPNGERLENLSWRLWNKN 29 (29)
T ss_pred hhhhhhcCcchhHHHHHHHHHhcC
Confidence 344445555889999999999864
No 200
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.87 E-value=0.19 Score=53.91 Aligned_cols=200 Identities=16% Similarity=0.115 Sum_probs=112.5
Q ss_pred CCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 304 VWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+||++++....+..++..+.+..+.+.|+-+.+. + .-.+.-|.||++
T Consensus 69 ~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~P------------r--------------------lp~~~fDlvivp 116 (329)
T COG3660 69 QRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDP------------R--------------------LPYNHFDLVIVP 116 (329)
T ss_pred CCCceEEecccchhHHHHHHHHhcCCceEEEeeCC------------C--------------------CCcccceEEecc
Confidence 57999999988788888888888877666555542 1 114557999999
Q ss_pred CHHHHHHHHhhcCCCchHHHHHHHHHHhcCcccCCCCCCCEEEeCCCCCCCCccCCCCCCccccccccccCCCCCCCCCC
Q 001492 384 TKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKA 463 (1067)
Q Consensus 384 S~~~~~~~~~~y~~~~~~l~~~l~~~~~~Gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1067)
-++.++++-.. ...++|.-=.+..+.+..
T Consensus 117 ~HD~~~~~s~~----------------------------~~Nilpi~Gs~h~Vt~~~----------------------- 145 (329)
T COG3660 117 YHDWREELSDQ----------------------------GPNILPINGSPHNVTSQR----------------------- 145 (329)
T ss_pred chhhhhhhhcc----------------------------CCceeeccCCCCcccHHH-----------------------
Confidence 98877663211 123344211122222111
Q ss_pred cchhhHhhhhhccCCCCcEEEEEeCCCCCCCH-----HHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHH
Q 001492 464 IPAIWSDVMRFLTNPHKPMILALSRPDPKKNI-----TTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITV 538 (1067)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi-----~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i 538 (1067)
..+..+..++++..+...+-+.||.-.+.-.+ ..+..++-+. +.....-.++--+|-..+. +
T Consensus 146 lAa~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~--l~~~g~~~lisfSRRTp~~-----------~ 212 (329)
T COG3660 146 LAALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKI--LENQGGSFLISFSRRTPDT-----------V 212 (329)
T ss_pred hhhhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHH--HHhCCceEEEEeecCCcHH-----------H
Confidence 01111222333345666788899987655444 2223333222 1212222345455543222 2
Q ss_pred HHHHHh-cCCCCcEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC
Q 001492 539 LKLIDK-YDLYGQVAYPKHH-KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG 606 (1067)
Q Consensus 539 ~~l~~~-~~l~~~V~~~g~~-~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg 606 (1067)
..++.. +.-.+.+++.+.- ...=..++++.| |.+|.+...-.| +-||++.|+||-.-...+
T Consensus 213 ~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~TaDSinM---~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 213 KSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTADSINM---CSEAASTGKPVFILEPPN 275 (329)
T ss_pred HHHHHhccccCceeEeCCCCCCCCchHHHHhhc----ceEEEecchhhh---hHHHhccCCCeEEEecCC
Confidence 233333 4555566666541 223578899999 999988654333 679999999998765443
No 201
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=96.81 E-value=0.062 Score=61.20 Aligned_cols=153 Identities=13% Similarity=0.110 Sum_probs=89.4
Q ss_pred hhhccCCCCcEE-EEEe-CCC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCC
Q 001492 472 MRFLTNPHKPMI-LALS-RPD-PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLY 548 (1067)
Q Consensus 472 ~~~~~~~~~~~I-l~vg-Rld-~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~ 548 (1067)
..+..+.+++++ +..| |-. -.+..+.+++|+..+. ...|++.+++.-.... +...+....+.....
T Consensus 180 ~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~--~~~~~~~~vlp~~~~~---------~~~~~~~~~~~~~~~ 248 (381)
T COG0763 180 EKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELK--ARYPDLKFVLPLVNAK---------YRRIIEEALKWEVAG 248 (381)
T ss_pred HHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHH--hhCCCceEEEecCcHH---------HHHHHHHHhhccccC
Confidence 344455565554 4444 332 3567888899999985 4678888888765421 111122222222211
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC-CCCchhhhcc------------CC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK-NGGPVDIHRA------------LN 615 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~-~Gg~~eiv~~------------~~ 615 (1067)
..+. +...+-...+..| |+.+.. .|.+.+|++.+|+|+|.+= ...+.-.+.. --
T Consensus 249 ~~~~----~~~~~~~~a~~~a----D~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi 315 (381)
T COG0763 249 LSLI----LIDGEKRKAFAAA----DAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNIL 315 (381)
T ss_pred ceEE----ecCchHHHHHHHh----hHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHh
Confidence 1222 2245677899999 998876 4999999999999998864 3322111100 00
Q ss_pred ce-EEe-----CCCCHHHHHHHHHHhhcCHHHHHHHHHH
Q 001492 616 NG-LLV-----DPHDQQAIADALLKLVSEKNLWVECRKN 648 (1067)
Q Consensus 616 ~G-llv-----~p~d~~~la~aL~~ll~d~~~~~~~~~~ 648 (1067)
.| .+| ..-.++.|++++..++.++..+.++.+.
T Consensus 316 ~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~ 354 (381)
T COG0763 316 AGREIVPELIQEDCTPENLARALEELLLNGDRREALKEK 354 (381)
T ss_pred cCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHH
Confidence 11 111 1135789999999999998554444443
No 202
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=96.78 E-value=0.027 Score=61.00 Aligned_cols=140 Identities=21% Similarity=0.322 Sum_probs=85.0
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCC
Q 001492 478 PHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHH 557 (1067)
Q Consensus 478 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 557 (1067)
+.+.+++++|.-|+ ||+ .++.+..+. +..-++.+|+|+.... +..+.+.+ ..++++.++-.
T Consensus 157 ~~r~ilI~lGGsDp-k~l--t~kvl~~L~--~~~~nl~iV~gs~~p~----------l~~l~k~~---~~~~~i~~~~~- 217 (318)
T COG3980 157 PKRDILITLGGSDP-KNL--TLKVLAELE--QKNVNLHIVVGSSNPT----------LKNLRKRA---EKYPNINLYID- 217 (318)
T ss_pred chheEEEEccCCCh-hhh--HHHHHHHhh--ccCeeEEEEecCCCcc----------hhHHHHHH---hhCCCeeeEec-
Confidence 34457888888886 544 344445553 2235788899976431 23333444 44567776555
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCC--EEE--cCCCCchhhhccCCceEEeCC---CCHHHHHH
Q 001492 558 KQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLP--MVA--TKNGGPVDIHRALNNGLLVDP---HDQQAIAD 630 (1067)
Q Consensus 558 ~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~P--VVa--t~~Gg~~eiv~~~~~Gllv~p---~d~~~la~ 630 (1067)
.++++.++..| |..|.. -|.|+.||+..|+| +|. .+--........ -|+..+- ........
T Consensus 218 -~~dma~LMke~----d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~--lg~~~~l~~~l~~~~~~~ 285 (318)
T COG3980 218 -TNDMAELMKEA----DLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEA--LGIIKQLGYHLKDLAKDY 285 (318)
T ss_pred -chhHHHHHHhc----chheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHh--cCchhhccCCCchHHHHH
Confidence 57899999999 888865 48999999999999 332 322111111111 1222211 23567777
Q ss_pred HHHHhhcCHHHHHHHHHH
Q 001492 631 ALLKLVSEKNLWVECRKN 648 (1067)
Q Consensus 631 aL~~ll~d~~~~~~~~~~ 648 (1067)
.+.++.+|+..+..+...
T Consensus 286 ~~~~i~~d~~~rk~l~~~ 303 (318)
T COG3980 286 EILQIQKDYARRKNLSFG 303 (318)
T ss_pred HHHHhhhCHHHhhhhhhc
Confidence 788888888876655443
No 203
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.78 E-value=0.31 Score=54.25 Aligned_cols=169 Identities=14% Similarity=0.034 Sum_probs=109.1
Q ss_pred CcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcE-EeCCCC
Q 001492 480 KPMILALSR-PDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQV-AYPKHH 557 (1067)
Q Consensus 480 ~~~Il~vgR-ld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V-~~~g~~ 557 (1067)
.++.+-+|. =|+.-+....++++.+.. ..++.++++=+ +..++++|..++.+...++--.+++ .+...+
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~----~~~v~ii~Pls-----Yp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l 215 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQF----GDNVKIIVPMG-----YPANNQAYIEEVRQAGLALFGAENFQILTEKL 215 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHh----CCCeEEEEECC-----cCCCCHHHHHHHHHHHHHhcCcccEEehhhhC
Confidence 355555665 567888888888887663 34666666433 1224567888888888887553455 457789
Q ss_pred CCCCHHHHHHHhhcCCcEEEecC-CCCCCCHHHHHHHHcCCCEEEcC-CCCchhhhccCCceEEeCCC--CHHHHHHHHH
Q 001492 558 KQYDVPEIYRLAAKTKGVFINPA-LVEPFGLTLIEAAAHGLPMVATK-NGGPVDIHRALNNGLLVDPH--DQQAIADALL 633 (1067)
Q Consensus 558 ~~~dl~~ly~~A~~~~dV~v~ps-~~EgfgltllEAmA~G~PVVat~-~Gg~~eiv~~~~~Gllv~p~--d~~~la~aL~ 633 (1067)
+.+|..++++.| |+.++-- ..+|+|..++ .+..|+||+-+. +.-..++.+.+. -++++.+ |...+.++
T Consensus 216 ~f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv-~Vlf~~d~L~~~~v~e~-- 287 (322)
T PRK02797 216 PFDDYLALLRQC----DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGL-PVLFTGDDLDEDIVREA-- 287 (322)
T ss_pred CHHHHHHHHHhC----CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCC-eEEecCCcccHHHHHHH--
Confidence 999999999999 9988875 4578886543 688999999875 566677655433 2334432 22222221
Q ss_pred HhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Q 001492 634 KLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 634 ~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 674 (1067)
.+++...-++.+ .|+-+...+.|.+++.....
T Consensus 288 --------~rql~~~dk~~I-~Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 288 --------QRQLASVDKNII-AFFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred --------HHHHHhhCccee-eecCHhHHHHHHHHHHHhhC
Confidence 111222222222 38989888888888876543
No 204
>PLN02645 phosphoglycolate phosphatase
Probab=96.75 E-value=0.0041 Score=70.75 Aligned_cols=65 Identities=15% Similarity=0.167 Sum_probs=48.3
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCC---HHHHHHHHHhcCCCCCCCCEEEEcC
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP---VSETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~---~~~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+|++|+||||.+.+ .+.+...++|++|+++| + .|+++|+|+ ...+.+.|..+|++. .++.++++.
T Consensus 30 ~~~~D~DGtl~~~~-~~~~ga~e~l~~lr~~g----~-~~~~~TN~~~~~~~~~~~~l~~lGi~~-~~~~I~ts~ 97 (311)
T PLN02645 30 TFIFDCDGVIWKGD-KLIEGVPETLDMLRSMG----K-KLVFVTNNSTKSRAQYGKKFESLGLNV-TEEEIFSSS 97 (311)
T ss_pred EEEEeCcCCeEeCC-ccCcCHHHHHHHHHHCC----C-EEEEEeCCCCCCHHHHHHHHHHCCCCC-ChhhEeehH
Confidence 44459999988765 45588899999999997 6 899999998 444455557788863 456566553
No 205
>PLN02210 UDP-glucosyl transferase
Probab=96.70 E-value=1.8 Score=51.92 Aligned_cols=82 Identities=15% Similarity=0.140 Sum_probs=53.8
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhcc-CCceEEeCC--
Q 001492 550 QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRA-LNNGLLVDP-- 622 (1067)
Q Consensus 550 ~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~p-- 622 (1067)
+..+.++.|+.+ ++..++ .+.||.= -|+ .+++||+++|+|+|+-...+= ...+.+ ...|+.++.
T Consensus 325 ~g~v~~w~PQ~~---iL~h~~--vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 395 (456)
T PLN02210 325 QGVVLEWSPQEK---ILSHMA--ISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA 395 (456)
T ss_pred CeEEEecCCHHH---HhcCcC--cCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc
Confidence 334558887754 666661 1356632 233 488999999999999765432 223333 467877742
Q ss_pred ----CCHHHHHHHHHHhhcCHH
Q 001492 623 ----HDQQAIADALLKLVSEKN 640 (1067)
Q Consensus 623 ----~d~~~la~aL~~ll~d~~ 640 (1067)
-+.+++++++.+++.+++
T Consensus 396 ~~~~~~~~~l~~av~~~m~~~~ 417 (456)
T PLN02210 396 VDGELKVEEVERCIEAVTEGPA 417 (456)
T ss_pred cCCcCCHHHHHHHHHHHhcCch
Confidence 377899999999998754
No 206
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.70 E-value=0.013 Score=76.79 Aligned_cols=40 Identities=10% Similarity=-0.008 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.+-+.++++|+++++.| + .++++|||++.++..+.+++|+
T Consensus 568 plr~~v~~aI~~l~~~G----i-~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAG----I-KVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred CChHHHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCC
Confidence 35588999999999998 8 9999999999999999999887
No 207
>PLN02555 limonoid glucosyltransferase
Probab=96.68 E-value=1.1 Score=53.90 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=59.3
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chh-hhccCCceEEeC--
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVD-IHRALNNGLLVD-- 621 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~e-iv~~~~~Gllv~-- 621 (1067)
+++.+.++.|+.++-.. ..+ +.||.- +--.+++||+.+|+|+|+-..-+ ... +++.-.-|+-+.
T Consensus 337 ~~g~v~~W~PQ~~iL~H-~~v----~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEKVLAH-PSV----ACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHHHhCC-Ccc----CeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 46677788876553221 233 566632 22458999999999999976533 122 222225676662
Q ss_pred ---C--CCHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 001492 622 ---P--HDQQAIADALLKLVSEKNLWVECRKNGWKN 652 (1067)
Q Consensus 622 ---p--~d~~~la~aL~~ll~d~~~~~~~~~~~~~~ 652 (1067)
. -+.++++.+|.+++.+++ ..++++++++.
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGEK-AAELKQNALKW 442 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCch-HHHHHHHHHHH
Confidence 1 257899999999997643 45566666544
No 208
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=96.67 E-value=0.014 Score=63.53 Aligned_cols=66 Identities=15% Similarity=0.095 Sum_probs=52.0
Q ss_pred EEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEEC---CCCHHHHHHHHHh-cCCCCCCCCEEEEcCCce
Q 001492 781 ALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALST---AMPVSETIEFLNS-MKIEANEFDALICSSGGE 853 (1067)
Q Consensus 781 a~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaT---GR~~~~~~~~l~~-l~i~~~~~d~~I~~nGa~ 853 (1067)
.+|+||||.+.+..+ +.+.++|+.++++| + .+++.| ||+...+.+.|.+ ++++. .++-+|++....
T Consensus 2 lfD~DGvL~~~~~~~-~~a~e~i~~l~~~g----~-~~~~~tN~~~~~~~~~~~~l~~~~g~~~-~~~~iits~~~~ 71 (236)
T TIGR01460 2 LFDIDGVLWLGHKPI-PGAAEALNRLRAKG----K-PVVFLTNNSSRSEEDYAEKLSSLLGVDV-SPDQIITSGSVT 71 (236)
T ss_pred EEeCcCccCcCCccC-cCHHHHHHHHHHCC----C-eEEEEECCCCCCHHHHHHHHHHhcCCCC-CHHHeeeHHHHH
Confidence 459999988875544 48899999999886 5 677877 9999999998888 78763 567788875544
No 209
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.56 E-value=0.0042 Score=60.93 Aligned_cols=54 Identities=17% Similarity=0.178 Sum_probs=43.2
Q ss_pred EEEEeCCCCCCCCc----h--------hhHHHHHHHHHHHHhcCCCCceeEEEEECCC-CHHHHHHHHHhcC
Q 001492 779 VIALDCYDSKGAPD----K--------KMIQIMYDVFKAVRLDHQTARVTGFALSTAM-PVSETIEFLNSMK 837 (1067)
Q Consensus 779 lia~DiDGTLl~~~----~--------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR-~~~~~~~~l~~l~ 837 (1067)
+|++|+||||.+.. . .+-+.+.+.|+.|+++| + .++|+|++ +...+...++..+
T Consensus 2 li~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g----~-~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 2 VIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNG----F-LLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred EEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCC----e-EEEEEeCCCCHHHHHHHHHhcc
Confidence 56669999977662 1 25679999999999987 8 89999999 7777777788765
No 210
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.43 E-value=0.37 Score=58.70 Aligned_cols=152 Identities=14% Similarity=0.142 Sum_probs=86.1
Q ss_pred hhhccCCCCcEE-EEEe-CCC-CCCCHHHHHHHHH--hcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcC
Q 001492 472 MRFLTNPHKPMI-LALS-RPD-PKKNITTLLKAFG--ECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYD 546 (1067)
Q Consensus 472 ~~~~~~~~~~~I-l~vg-Rld-~~Kgi~~ll~A~~--~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~ 546 (1067)
.++..++++++| +.-| |-. -++.++.+++|+. .+. + ++.+++...+.. ....+...+...+
T Consensus 405 ~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~--~l~fvvp~a~~~---------~~~~i~~~~~~~~ 470 (608)
T PRK01021 405 EQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---S--THQLLVSSANPK---------YDHLILEVLQQEG 470 (608)
T ss_pred HHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---c--CeEEEEecCchh---------hHHHHHHHHhhcC
Confidence 344445566654 3334 443 3567889999998 552 2 355666543321 1223334443322
Q ss_pred CCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEc-CCCCchh-----hhc--------
Q 001492 547 LYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT-KNGGPVD-----IHR-------- 612 (1067)
Q Consensus 547 l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat-~~Gg~~e-----iv~-------- 612 (1067)
..+...+.+ .+-.+++++| |+.+..| |.+.+|++.+|+|+|.. ..+...- +++
T Consensus 471 ~~~~~ii~~----~~~~~~m~aa----D~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsL 537 (608)
T PRK01021 471 CLHSHIVPS----QFRYELMREC----DCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSL 537 (608)
T ss_pred CCCeEEecC----cchHHHHHhc----CeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeeh
Confidence 111112222 1246899999 9999874 99999999999999884 3332211 111
Q ss_pred -----cC--CceEE--eCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 001492 613 -----AL--NNGLL--VDPHDQQAIADALLKLVSEKNLWVECRKNGWK 651 (1067)
Q Consensus 613 -----~~--~~Gll--v~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~ 651 (1067)
+. ..-++ =+.-+++.+++++ +++.|++.++++.+...+
T Consensus 538 pNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~ 584 (608)
T PRK01021 538 PNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRD 584 (608)
T ss_pred hHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 00 01122 1334789999996 888998877666554443
No 211
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.42 E-value=0.02 Score=63.86 Aligned_cols=51 Identities=14% Similarity=0.117 Sum_probs=43.0
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCce-EEEeCCCc
Q 001492 963 VPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK-TLIMKGVV 1016 (1067)
Q Consensus 963 ~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~-gVaMgNA~ 1016 (1067)
++..-.+...+.++++++|++++++++ |||+.+ | ++|-+.+|. ++.+.++.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~-IGD~~~-D-i~aA~~aGi~~i~v~~G~ 204 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLF-VGDSRS-D-VLAAKAAGVQCVALSYGY 204 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEE-ECCCHH-H-HHHHHHCCCeEEEEecCC
Confidence 345556778999999999999999999 999999 9 999999996 56665544
No 212
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.41 E-value=0.017 Score=75.27 Aligned_cols=41 Identities=10% Similarity=-0.011 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-+.++++|+++++.| + +++++||.+...+..+.+++|+.
T Consensus 537 plr~~v~e~I~~l~~aG----I-~v~miTGD~~~tA~~ia~~~gi~ 577 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAG----I-RVIMITGDNKETAEAICRRIGIF 577 (917)
T ss_pred CCchhHHHHHHHHHHCC----C-EEEEecCCCHHHHHHHHHHcCCC
Confidence 35588999999999998 8 99999999999999999998873
No 213
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.40 E-value=0.022 Score=70.69 Aligned_cols=56 Identities=9% Similarity=-0.017 Sum_probs=43.9
Q ss_pred eEEEEEEeCCCCCC---CCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 776 RLIVIALDCYDSKG---APDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 776 klllia~DiDGTLl---~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
+.++++.| ++++ .=...+-+..+++++++++.| + ++++.||-....+..+.+++|+
T Consensus 427 r~l~va~~--~~~lG~i~l~D~~Rp~a~eaI~~l~~~G----i-~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 427 TPLVVCED--NRIYGVIYLKDIVKGGIKERFAQLRKMG----I-KTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred eEEEEEEC--CEEEEEEEecccchhHHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHcCC
Confidence 55667655 4411 112346689999999999998 8 9999999999999999999887
No 214
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.37 E-value=0.028 Score=71.62 Aligned_cols=59 Identities=12% Similarity=-0.057 Sum_probs=45.8
Q ss_pred eEEEEEE-eCCC--C---CCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 776 RLIVIAL-DCYD--S---KGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~-DiDG--T---Ll~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+.+.+|+ |.++ + +..=...+-+.++++|+++++.| + ++++.||.+...+..+.+++||.
T Consensus 418 rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aG----I-~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 418 RALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLG----V-EVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred EEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCCC
Confidence 6777777 4322 3 11112346689999999999998 9 99999999999999999999984
No 215
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.35 E-value=0.031 Score=73.07 Aligned_cols=41 Identities=5% Similarity=0.015 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-+.++++|+++++.| + ++++.||-+..++..+.+++|+.
T Consensus 579 plr~~~~~aI~~l~~aG----I-~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 579 PLRPGVREAVQECQRAG----I-TVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred CCchhHHHHHHHHHHCC----C-EEEEECCCChHHHHHHHHHcCCC
Confidence 45689999999999998 9 99999999999999999999884
No 216
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.32 E-value=0.35 Score=54.53 Aligned_cols=143 Identities=12% Similarity=0.062 Sum_probs=93.3
Q ss_pred CcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEe-CCCC
Q 001492 480 KPMILALSR-PDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAY-PKHH 557 (1067)
Q Consensus 480 ~~~Il~vgR-ld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~-~g~~ 557 (1067)
+++-+-+|. -++.-+....++++.... ..++.++++=+= ...+++|..++.+...++--.+++.. ..++
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~----~~~~kIivPLsY-----g~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~m 254 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF----GDDVKIIVPLSY-----GANNQAYIQQVIQAGKELFGAENFQILTEFM 254 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc----CCCeEEEEECCC-----CCchHHHHHHHHHHHHHhcCccceeEhhhhC
Confidence 345445555 578888888888777642 245666554321 11235678888888887754456654 5799
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCC-chhhhccCCceEEe--CCCCHHHHHHHHH
Q 001492 558 KQYDVPEIYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGG-PVDIHRALNNGLLV--DPHDQQAIADALL 633 (1067)
Q Consensus 558 ~~~dl~~ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg-~~eiv~~~~~Gllv--~p~d~~~la~aL~ 633 (1067)
|.+|..++++.| |+.++... ..++|..+ =.+.+|+||+-+...- ..++.+.+. -+++ +.-|...++++=+
T Consensus 255 pf~eYl~lL~~c----Dl~if~~~RQQgiGnI~-lLl~~G~~v~L~~~np~~~~l~~~~i-pVlf~~d~L~~~~v~ea~r 328 (360)
T PF07429_consen 255 PFDEYLALLSRC----DLGIFNHNRQQGIGNIC-LLLQLGKKVFLSRDNPFWQDLKEQGI-PVLFYGDELDEALVREAQR 328 (360)
T ss_pred CHHHHHHHHHhC----CEEEEeechhhhHhHHH-HHHHcCCeEEEecCChHHHHHHhCCC-eEEeccccCCHHHHHHHHH
Confidence 999999999999 99999975 57888544 4689999999987544 455544322 2333 3445566666555
Q ss_pred Hhhc
Q 001492 634 KLVS 637 (1067)
Q Consensus 634 ~ll~ 637 (1067)
++..
T Consensus 329 ql~~ 332 (360)
T PF07429_consen 329 QLAN 332 (360)
T ss_pred HHhh
Confidence 5544
No 217
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=96.31 E-value=0.042 Score=67.70 Aligned_cols=140 Identities=15% Similarity=0.126 Sum_probs=103.9
Q ss_pred cCCCCcEEEEEeCCCCCCCHHHHHHHHHhccc-c--cCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 476 TNPHKPMILALSRPDPKKNITTLLKAFGECRP-L--RELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 476 ~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~-l--~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
.+|+..+++++-|+...|.....+.=...+.. + ...|.+.+|.|+....... .....+..|+..++..+...+|.
T Consensus 483 ~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~--~aK~iIk~I~~~a~~in~~lkVv 560 (750)
T COG0058 483 VDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADY--AAKEIIKLINDVADVINNKLKVV 560 (750)
T ss_pred cCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcch--HHHHHHHHHHHHHHhhcccceEE
Confidence 35778899999999988866555433333321 1 2345677666655322211 22467788888888887777899
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhc--cCCceEEeC
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHR--ALNNGLLVD 621 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~--~~~~Gllv~ 621 (1067)
|....+-+-...++.+| ||-.+.|. .|..|..-+=|+--|.|-|+|..|+..|+.+ .+.||+++-
T Consensus 561 Fl~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 561 FLPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred EeCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 98887655556667777 99999887 5999999999999999999999999999997 788999995
No 218
>PRK14986 glycogen phosphorylase; Provisional
Probab=96.31 E-value=0.008 Score=74.73 Aligned_cols=148 Identities=12% Similarity=0.128 Sum_probs=108.1
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc-----EEEEEecC--CChhhhhccchHHHHHHHHHHHhc-
Q 001492 475 LTNPHKPMILALSRPDPKKNITT-LLKAFGECRPLRELAN-----LTLIMGNR--DDIEEMSSGNASVLITVLKLIDKY- 545 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~-----l~lIvG~~--~~~~~l~~~~~~~~~~i~~l~~~~- 545 (1067)
..+|+..+++++-|+...|...+ ++..+..+.++...|+ .++|.|+. |.+.. ...++..|+..++..
T Consensus 538 ~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~----aK~iIk~I~~va~~in 613 (815)
T PRK14986 538 VVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYM----AKHIIHLINDVAKVIN 613 (815)
T ss_pred ccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH----HHHHHHHHHHHHHHhc
Confidence 35778889999999999998777 7777665554444432 55555554 22222 245677777777722
Q ss_pred ---CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--CCc
Q 001492 546 ---DLYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNN 616 (1067)
Q Consensus 546 ---~l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--~~~ 616 (1067)
.+.+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..-+=+|.-|.+.++|..|...|+.++ +.|
T Consensus 614 ~Dp~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN 689 (815)
T PRK14986 614 NDPQIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEEN 689 (815)
T ss_pred cChhhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCc
Confidence 3344 78888776655556677777 99999887 69999999999999999999999999999876 789
Q ss_pred eEEeCCCCHHHHHHH
Q 001492 617 GLLVDPHDQQAIADA 631 (1067)
Q Consensus 617 Gllv~p~d~~~la~a 631 (1067)
|+++-. +.+++.+-
T Consensus 690 ~~~fG~-~~~ev~~~ 703 (815)
T PRK14986 690 IFIFGN-TAEEVEAL 703 (815)
T ss_pred EEEeCC-CHHHHHHH
Confidence 999963 56665543
No 219
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=96.28 E-value=0.064 Score=60.79 Aligned_cols=112 Identities=13% Similarity=0.074 Sum_probs=67.6
Q ss_pred cCCCCcEEEEEeCCCCCC--CHH---HHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCc
Q 001492 476 TNPHKPMILALSRPDPKK--NIT---TLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQ 550 (1067)
Q Consensus 476 ~~~~~~~Il~vgRld~~K--gi~---~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~ 550 (1067)
..+...+.+.||.....- +-+ .+++.+..+. +....-.+|..++-... +....+.+..+ -.+.
T Consensus 143 ~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~vttSRRTp~-------~~~~~L~~~~~---~~~~ 210 (311)
T PF06258_consen 143 ALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALA--AAYGGSLLVTTSRRTPP-------EAEAALRELLK---DNPG 210 (311)
T ss_pred cCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHH--HhCCCeEEEEcCCCCcH-------HHHHHHHHhhc---CCCc
Confidence 345556677888754322 333 4555555553 22232234667664332 23344444443 3356
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG 606 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg 606 (1067)
+.+...-+..=+..+|..| |.++++.-.-. -+.||+++|+||..-...+
T Consensus 211 ~~~~~~~~~nPy~~~La~a----d~i~VT~DSvS---MvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 211 VYIWDGTGENPYLGFLAAA----DAIVVTEDSVS---MVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred eEEecCCCCCcHHHHHHhC----CEEEEcCccHH---HHHHHHHcCCCEEEecCCC
Confidence 6555555556699999999 99999854433 3789999999999887655
No 220
>PLN03015 UDP-glucosyl transferase
Probab=96.26 E-value=3.5 Score=49.59 Aligned_cols=92 Identities=14% Similarity=0.152 Sum_probs=55.4
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhh-ccCCceEEeC----
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIH-RALNNGLLVD---- 621 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv-~~~~~Gllv~---- 621 (1067)
+.+.++.|+.++-. .. ..+.||.- +--.+.+||+.+|+|+|+-...+= ...+ +....|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~--~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HR--SIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cC--ccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 45668888776544 33 11456632 223588999999999999765332 1222 3334565553
Q ss_pred --CCCHHHHHHHHHHhhcC-HHHHHHHHHHHHH
Q 001492 622 --PHDQQAIADALLKLVSE-KNLWVECRKNGWK 651 (1067)
Q Consensus 622 --p~d~~~la~aL~~ll~d-~~~~~~~~~~~~~ 651 (1067)
.-..++++++|++++.. .+.-+++++++++
T Consensus 408 ~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~ 440 (470)
T PLN03015 408 EKVIGREEVASLVRKIVAEEDEEGQKIRAKAEE 440 (470)
T ss_pred CCccCHHHHHHHHHHHHccCcccHHHHHHHHHH
Confidence 13678999999999952 1233455555543
No 221
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.25 E-value=0.096 Score=57.78 Aligned_cols=200 Identities=11% Similarity=0.057 Sum_probs=102.1
Q ss_pred EEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEEC---CCCHHHHHHHHHh-cCCCCCCCCEEEEcCCceEE
Q 001492 780 IALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALST---AMPVSETIEFLNS-MKIEANEFDALICSSGGEMY 855 (1067)
Q Consensus 780 ia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaT---GR~~~~~~~~l~~-l~i~~~~~d~~I~~nGa~I~ 855 (1067)
+.+|+|||+.+. .+.-+...++|+.|+++| + .+++.| .|+...+..-|.. .+++ ..++.++++.=+-..
T Consensus 11 ~l~DlDGvl~~G-~~~ipga~e~l~~L~~~g----~-~~iflTNn~~~s~~~~~~~L~~~~~~~-~~~~~i~TS~~at~~ 83 (269)
T COG0647 11 FLFDLDGVLYRG-NEAIPGAAEALKRLKAAG----K-PVIFLTNNSTRSREVVAARLSSLGGVD-VTPDDIVTSGDATAD 83 (269)
T ss_pred EEEcCcCceEeC-CccCchHHHHHHHHHHcC----C-eEEEEeCCCCCCHHHHHHHHHhhcCCC-CCHHHeecHHHHHHH
Confidence 444999997765 456678889999999997 5 555654 5566667778888 4444 345666665321111
Q ss_pred ecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccCCCCCCCCCCCcccccccCCceEEEEEecCCCchHHH
Q 001492 856 YPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEGGENSKNSSSPIQEDQKSSNAHCISYLIKDPSKARRI 935 (1067)
Q Consensus 856 ~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~ 935 (1067)
+-. +. ....--+..+.+.+.+.+....-..... .+. ....++....+.......+
T Consensus 84 ~l~-----------~~-~~~~kv~viG~~~l~~~l~~~G~~~~~~------------~~~-~~~d~Vv~g~d~~~~~e~l 138 (269)
T COG0647 84 YLA-----------KQ-KPGKKVYVIGEEGLKEELEGAGFELVDE------------EEP-ARVDAVVVGLDRTLTYEKL 138 (269)
T ss_pred HHH-----------hh-CCCCEEEEECCcchHHHHHhCCcEEecc------------CCC-CcccEEEEecCCCCCHHHH
Confidence 110 00 0000112223445555443322111111 001 1122333332222222222
Q ss_pred HHHHHHHHhcCCcEEEEEeeCCee---------------------EEEecCCCCHHH--HHHHHHHHhCCCcccEEEEec
Q 001492 936 DDLRQKLRMRGLRCHPMYCRNSTR---------------------MQIVPLLASRSQ--ALRYLFVRWRLNVANMFVILG 992 (1067)
Q Consensus 936 ~el~~~L~~~~~~~~v~~s~~~~~---------------------lEI~p~gasKg~--AL~~L~~~~gi~~e~vva~fG 992 (1067)
.+....++.. +.++-+++... -...|.-+.|-. ..+..++.++.+.+++++ +|
T Consensus 139 ~~a~~~i~~g---~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~m-VG 214 (269)
T COG0647 139 AEALLAIAAG---APFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLM-VG 214 (269)
T ss_pred HHHHHHHHcC---CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEE-Ec
Confidence 2333333221 33333332110 122333445543 456678889999999999 99
Q ss_pred CCCCCChhhhhcCCceEE-EeCCCc
Q 001492 993 ESGDTDYEELISGAHKTL-IMKGVV 1016 (1067)
Q Consensus 993 Ds~N~D~~eML~~ag~gV-aMgNA~ 1016 (1067)
|+.+|| +.+=..+|..- .+--+.
T Consensus 215 D~~~TD-I~~a~~~G~~t~LV~TGv 238 (269)
T COG0647 215 DRLDTD-ILGAKAAGLDTLLVLTGV 238 (269)
T ss_pred CCchhh-HHHHHHcCCCEEEEccCC
Confidence 999999 88877777643 444444
No 222
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.23 E-value=0.052 Score=70.23 Aligned_cols=41 Identities=10% Similarity=0.013 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-+.++++|+++++.| + .+++.||-+...+..+.+++||.
T Consensus 515 p~R~~~~~aI~~l~~aG----I-~vvmiTGD~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 515 PPKESTKEAIAALFKNG----I-NVKVLTGDNEIVTARICQEVGID 555 (867)
T ss_pred CCchhHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHcCCC
Confidence 35588999999999998 9 99999999999999999999883
No 223
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.15 E-value=0.071 Score=69.30 Aligned_cols=59 Identities=8% Similarity=-0.005 Sum_probs=46.1
Q ss_pred eEEEEEEeC---CCCC---CCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 776 RLIVIALDC---YDSK---GAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~Di---DGTL---l~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
|.+.+|++- |.|+ ..=...+-+.++++|+.+++.| + +++++||-+...+..+.+++|+.
T Consensus 504 rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~G----i-~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 504 RVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGG----V-RIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred EEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCCC
Confidence 677777763 2231 1112346689999999999997 8 99999999999999999999884
No 224
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.08 E-value=0.054 Score=70.29 Aligned_cols=41 Identities=15% Similarity=0.047 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-++++++|+++++.| | .+++.||=+...+..+.+++||.
T Consensus 550 p~R~~a~~aI~~l~~aG----I-~v~miTGD~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 550 PPKESAAPAIAALRENG----V-AVKVLTGDNPIVTAKICREVGLE 590 (903)
T ss_pred ccHHHHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCCC
Confidence 46689999999999998 9 99999999999999999999883
No 225
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.07 E-value=0.017 Score=74.68 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=67.7
Q ss_pred HHHHHHHHHhcCCcEEEEEeeCC--------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChh
Q 001492 935 IDDLRQKLRMRGLRCHPMYCRNS--------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYE 1000 (1067)
Q Consensus 935 ~~el~~~L~~~~~~~~v~~s~~~--------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~ 1000 (1067)
..+..+.|+..+..+.++...+. .+-++.|. .|..+++.+.. ..+++++ |||+.| | .
T Consensus 655 a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~p~--~K~~~i~~l~~----~~~~v~~-vGDg~n-D-~ 725 (834)
T PRK10671 655 SVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPD--GKAEAIKRLQS----QGRQVAM-VGDGIN-D-A 725 (834)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCCHH--HHHHHHHHHhh----cCCEEEE-EeCCHH-H-H
Confidence 44555666666655444332211 13344554 49888887754 3456777 999999 9 9
Q ss_pred hhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHH
Q 001492 1001 ELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALR 1058 (1067)
Q Consensus 1001 eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~ 1058 (1067)
+||+.+|.||+|||+. +..+..|+ ++....+.++|.++++
T Consensus 726 ~al~~Agvgia~g~g~---~~a~~~ad---------------~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 726 PALAQADVGIAMGGGS---DVAIETAA---------------ITLMRHSLMGVADALA 765 (834)
T ss_pred HHHHhCCeeEEecCCC---HHHHHhCC---------------EEEecCCHHHHHHHHH
Confidence 9999999999999988 55566666 6666778899999986
No 226
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.05 E-value=0.034 Score=73.11 Aligned_cols=41 Identities=5% Similarity=-0.108 Sum_probs=37.3
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-+.++++|+.+++.| | ++++.||....++..+.+++||.
T Consensus 646 p~r~~v~~aI~~l~~aG----I-kv~MiTGD~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAG----I-NVHMLTGDFPETAKAIAQEVGII 686 (1053)
T ss_pred CCchhHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHcCCC
Confidence 35588999999999998 9 99999999999999999999983
No 227
>PLN02167 UDP-glycosyltransferase family protein
Probab=96.03 E-value=5.3 Score=48.32 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=76.5
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 479 HKPMILALSRPD--PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 479 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
+..+.+++|.+. ..+.+..++.+++.+. ..+..+++...... .......-..+.+.+ .++..+.++
T Consensus 280 ~svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~~--~~~~~~lp~~~~er~-----~~rg~v~~w 347 (475)
T PLN02167 280 SSVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAEY--ASPYEPLPEGFMDRV-----MGRGLVCGW 347 (475)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCcccc--cchhhhCChHHHHHh-----ccCeeeecc
Confidence 346677888763 3445677777776652 13444555321100 000000001111111 234556688
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----h-hhhccCCceEEeCC---------
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----V-DIHRALNNGLLVDP--------- 622 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~-eiv~~~~~Gllv~p--------- 622 (1067)
.|+.+ ++...+ .+.||.= -|+ .+++||+++|+|+|+-...+= . -+++....|+.+..
T Consensus 348 ~PQ~~---iL~h~~--vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 418 (475)
T PLN02167 348 APQVE---ILAHKA--IGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEI 418 (475)
T ss_pred CCHHH---HhcCcc--cCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCc
Confidence 77654 555531 1556632 233 488999999999999764332 1 22444456776642
Q ss_pred CCHHHHHHHHHHhhcCH
Q 001492 623 HDQQAIADALLKLVSEK 639 (1067)
Q Consensus 623 ~d~~~la~aL~~ll~d~ 639 (1067)
-+.++++++|.+++.++
T Consensus 419 ~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 419 VKADEIAGAVRSLMDGE 435 (475)
T ss_pred ccHHHHHHHHHHHhcCC
Confidence 26789999999999754
No 228
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.01 E-value=0.062 Score=69.69 Aligned_cols=41 Identities=10% Similarity=0.058 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-++++++|+++++.| | .+++.||=+...+..+.+++||.
T Consensus 550 p~R~~a~~aI~~l~~aG----I-~v~miTGD~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 550 PPKETTAPALKALKASG----V-TVKILTGDSELVAAKVCHEVGLD 590 (902)
T ss_pred cchhhHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHcCCC
Confidence 45689999999999998 9 99999999999999999999883
No 229
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.97 E-value=0.023 Score=50.82 Aligned_cols=72 Identities=22% Similarity=0.220 Sum_probs=46.3
Q ss_pred cCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCc--hhHHHHHHHhcC
Q 001492 250 SSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYAD--AGDSAALLSGAL 327 (1067)
Q Consensus 250 ~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~--a~~~a~~l~~~~ 327 (1067)
.+|.+++.+|+.+. -.....|.+-... .+++.+.- + .+.||||+|.+. .+.-+.+-++.+
T Consensus 13 tngLKVYYlP~~~~----~~~~t~Pt~~~~~-pl~R~Ili------r-------E~I~IVHgH~a~S~l~hE~i~hA~~m 74 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF----YNQCTLPTLFGSF-PLLRNILI------R-------ERIDIVHGHQAFSTLCHEAILHARTM 74 (90)
T ss_pred CCCeEEEeecchhh----hcCcchHHHHHhh-HHHHHHHH------H-------cCeeEEEeehhhhHHHHHHHHHHHhC
Confidence 57999999998554 1222333322111 12222221 1 468999999874 355577788999
Q ss_pred CCcEEEEeCCCc
Q 001492 328 NVPMVLTGHSLG 339 (1067)
Q Consensus 328 giP~V~t~H~l~ 339 (1067)
|++.|+|-|++.
T Consensus 75 GlktVfTDHSLf 86 (90)
T PF08288_consen 75 GLKTVFTDHSLF 86 (90)
T ss_pred CCcEEeeccccc
Confidence 999999999984
No 230
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.95 E-value=0.012 Score=57.79 Aligned_cols=57 Identities=9% Similarity=0.118 Sum_probs=45.3
Q ss_pred eEEEEEEeCCCCCCCC--------chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCC--------HHHHHHHHHhcCCC
Q 001492 776 RLIVIALDCYDSKGAP--------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP--------VSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~DiDGTLl~~--------~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~--------~~~~~~~l~~l~i~ 839 (1067)
|++++ |+||||.+. +..+.+.+.++|+.|+++| + .++|+|+++ ...+..+++.+++.
T Consensus 1 k~~~~--D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g----~-~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 1 KGVVL--DLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAG----Y-KVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred CEEEE--eCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCC----C-EEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 34455 999997751 2345688899999999987 7 899999998 77888999998874
No 231
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=95.90 E-value=0.019 Score=62.31 Aligned_cols=40 Identities=13% Similarity=0.054 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
+...+.++++++|++++++++ |||+.+ | +.+-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVY-VGDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEE-eCCCHH-H-HHHHHHCCCcEE
Confidence 456799999999999999999 999999 9 999999997654
No 232
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=95.77 E-value=6.5 Score=47.21 Aligned_cols=145 Identities=16% Similarity=0.158 Sum_probs=77.2
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhh-ccchHHHHHHHHHHHhcCCCCcEEeCC
Q 001492 479 HKPMILALSRPD--PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMS-SGNASVLITVLKLIDKYDLYGQVAYPK 555 (1067)
Q Consensus 479 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~-~~~~~~~~~i~~l~~~~~l~~~V~~~g 555 (1067)
+.-+.+++|.+. +.+-+..+..+++.+. . .+..++......+... ..............++. .++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~--~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----R-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL--EEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----C-CeEEEEecCcccccccccccccccccchhHHHhc--cCCeEEEe
Confidence 355677888764 4566777788887773 1 3333554321100000 00000000011222222 34566678
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hhhhcc-CCceEEeC-----CCCH
Q 001492 556 HHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRA-LNNGLLVD-----PHDQ 625 (1067)
Q Consensus 556 ~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~-----p~d~ 625 (1067)
+.|+.+ ++...+ .++||.- +-..+++||+.+|+|+|+-...+= ...+.+ -..|+-+. .-+.
T Consensus 334 W~PQ~~---iL~h~~--vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 334 WCSQIE---VLRHRA--VGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred eCCHHH---HhCCcc--cceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 888654 555551 1345532 334589999999999999765332 222222 12455442 1267
Q ss_pred HHHHHHHHHhhcCH
Q 001492 626 QAIADALLKLVSEK 639 (1067)
Q Consensus 626 ~~la~aL~~ll~d~ 639 (1067)
+++++++.++++++
T Consensus 405 e~l~~av~~vm~~~ 418 (455)
T PLN02152 405 GEIRRCLEAVMEEK 418 (455)
T ss_pred HHHHHHHHHHHhhh
Confidence 89999999999754
No 233
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.68 E-value=0.021 Score=58.71 Aligned_cols=66 Identities=11% Similarity=0.134 Sum_probs=45.4
Q ss_pred CeEEEEEEeCCCCCCCCch-h-----------hHHHHHHHHHHHHhcCCCCceeEEEEECCCCH------------HHHH
Q 001492 775 RRLIVIALDCYDSKGAPDK-K-----------MIQIMYDVFKAVRLDHQTARVTGFALSTAMPV------------SETI 830 (1067)
Q Consensus 775 ~klllia~DiDGTLl~~~~-~-----------i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~------------~~~~ 830 (1067)
+|++++ |+||||....+ . +-+.+.++|+.|+++| + .++|+|..+. ..+.
T Consensus 13 ~k~~~~--D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G----~-~l~I~TN~~~~~~~~~~~~~~~~~i~ 85 (166)
T TIGR01664 13 SKVAAF--DLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEG----Y-KIVIFTNQSGIGRGKLSAESFKNKIE 85 (166)
T ss_pred CcEEEE--eCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCC----C-EEEEEeCCcccccCcccHHHHHHHHH
Confidence 466555 99999765322 1 2267899999999987 7 7899985443 2467
Q ss_pred HHHHhcCCCCCCCCEEEEcC
Q 001492 831 EFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 831 ~~l~~l~i~~~~~d~~I~~n 850 (1067)
.+++.+++. ++.+|+++
T Consensus 86 ~~l~~~gl~---~~~ii~~~ 102 (166)
T TIGR01664 86 AFLEKLKVP---IQVLAATH 102 (166)
T ss_pred HHHHHcCCC---EEEEEecC
Confidence 788998874 34555544
No 234
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.67 E-value=0.015 Score=54.60 Aligned_cols=61 Identities=16% Similarity=0.085 Sum_probs=42.6
Q ss_pred EEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEEC---CCCHHHHHHHHHhcCCCCCCCCEEEE
Q 001492 781 ALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALST---AMPVSETIEFLNSMKIEANEFDALIC 848 (1067)
Q Consensus 781 a~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaT---GR~~~~~~~~l~~l~i~~~~~d~~I~ 848 (1067)
.+|+||||.+. .++.+...++|++|++.| . .|++.| +|+.......|..+|++. .++-+|+
T Consensus 2 l~D~dGvl~~g-~~~ipga~e~l~~L~~~g----~-~~~~lTNns~~s~~~~~~~L~~~Gi~~-~~~~i~t 65 (101)
T PF13344_consen 2 LFDLDGVLYNG-NEPIPGAVEALDALRERG----K-PVVFLTNNSSRSREEYAKKLKKLGIPV-DEDEIIT 65 (101)
T ss_dssp EEESTTTSEET-TEE-TTHHHHHHHHHHTT----S-EEEEEES-SSS-HHHHHHHHHHTTTT---GGGEEE
T ss_pred EEeCccEeEeC-CCcCcCHHHHHHHHHHcC----C-CEEEEeCCCCCCHHHHHHHHHhcCcCC-CcCEEEC
Confidence 45999998775 456678899999999997 4 566665 466678888889989863 2333444
No 235
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.43 E-value=0.067 Score=70.79 Aligned_cols=41 Identities=10% Similarity=0.045 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+.+.++++|+++++.| | +++++||.+..++..+.+++||-
T Consensus 656 ~lr~~~~~~I~~l~~ag----i-~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRAS----I-RTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCCC
Confidence 46688999999999997 8 99999999999999999999883
No 236
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.35 E-value=0.11 Score=64.83 Aligned_cols=40 Identities=8% Similarity=-0.021 Sum_probs=36.7
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.+-+..++++++|++.| + +++++||=+...+..+.+++|+
T Consensus 445 ~~R~~~~eai~~Lr~~G----I-~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 445 IVKPGIKERFAELRKMG----I-KTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred cCchhHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCC
Confidence 35588999999999998 9 9999999999999999999887
No 237
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.22 E-value=0.12 Score=67.37 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 795 MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 795 i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+-+.++++|+.+++.| | ++..+||=...++..+.+++|+.
T Consensus 548 pr~~v~~aI~~l~~AG----I-~v~MiTGD~~~TA~aIa~~~Gi~ 587 (917)
T COG0474 548 PREDVKEAIEELREAG----I-KVWMITGDHVETAIAIAKECGIE 587 (917)
T ss_pred CCccHHHHHHHHHHCC----C-cEEEECCCCHHHHHHHHHHcCCC
Confidence 4488999999999998 9 99999999999999999998874
No 238
>PLN02534 UDP-glycosyltransferase
Probab=95.22 E-value=10 Score=45.98 Aligned_cols=92 Identities=16% Similarity=0.107 Sum_probs=55.7
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcE--EEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchh-----hhccCCceEEeC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGV--FINPALVEPFGLTLIEAAAHGLPMVATKNGGPVD-----IHRALNNGLLVD 621 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV--~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~e-----iv~~~~~Gllv~ 621 (1067)
..+.+.++.|+. +++... ++ ||.- +-..+++||+++|+|+|+-...+-.- +++.-..|+-+.
T Consensus 344 ~g~~v~~w~pq~---~iL~h~----~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~ 412 (491)
T PLN02534 344 RGLLIKGWAPQV---LILSHP----AIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVG 412 (491)
T ss_pred CCeeccCCCCHH---HHhcCC----ccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEec
Confidence 356777898874 456665 44 5532 33468999999999999976543211 122222333321
Q ss_pred ---------------CCCHHHHHHHHHHhhcC-HHHHHHHHHHHHH
Q 001492 622 ---------------PHDQQAIADALLKLVSE-KNLWVECRKNGWK 651 (1067)
Q Consensus 622 ---------------p~d~~~la~aL~~ll~d-~~~~~~~~~~~~~ 651 (1067)
--+.+++++++.+++.+ .+.-+++++++.+
T Consensus 413 ~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~e 458 (491)
T PLN02534 413 VEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQE 458 (491)
T ss_pred ccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 02578999999999962 2333455555543
No 239
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=95.20 E-value=0.051 Score=59.08 Aligned_cols=36 Identities=6% Similarity=-0.002 Sum_probs=30.5
Q ss_pred HHHHHHHHHhcCCCCceeEEEEECCC----CHHHHHHHHHhcCCC
Q 001492 799 MYDVFKAVRLDHQTARVTGFALSTAM----PVSETIEFLNSMKIE 839 (1067)
Q Consensus 799 ~~~al~~l~~~g~~g~i~~~vIaTGR----~~~~~~~~l~~l~i~ 839 (1067)
.+++|+.++++| + .++|+|+| .-..+..+++.+|++
T Consensus 119 a~elL~~l~~~G----~-~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRRG----D-AIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHCC----C-EEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 778899999997 7 89999999 556788888888885
No 240
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=95.14 E-value=0.23 Score=55.37 Aligned_cols=41 Identities=22% Similarity=0.227 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
.|..++.+++++++++++++++ |||+.+ | +.+-+.+|..++
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~-IGDs~~-D-i~aA~~AG~~~I 236 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMY-VGDETR-D-VEAARQVGLIAV 236 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-ECCCHH-H-HHHHHHCCCeEE
Confidence 4778999999999999999999 999999 9 999988886554
No 241
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=95.11 E-value=2 Score=50.08 Aligned_cols=110 Identities=10% Similarity=0.167 Sum_probs=65.0
Q ss_pred CCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEc--CC-------CCchhhhccCCc
Q 001492 546 DLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVAT--KN-------GGPVDIHRALNN 616 (1067)
Q Consensus 546 ~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat--~~-------Gg~~eiv~~~~~ 616 (1067)
...++|.+... ..++.+++..| |++|- -+.-++.|++.+++|||-. +. |...++ .+...
T Consensus 249 ~~~~~i~~~~~--~~~~~~ll~~a----DiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~p 316 (369)
T PF04464_consen 249 EDNSNIIFVSD--NEDIYDLLAAA----DILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLP 316 (369)
T ss_dssp T-TTTEEE-TT---S-HHHHHHT-----SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSS
T ss_pred ccCCcEEECCC--CCCHHHHHHhc----CEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCC
Confidence 34567777655 34899999999 99773 4677999999999999964 22 333332 23345
Q ss_pred eEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 001492 617 GLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 669 (1067)
|-++ .+.++|.++|..+++++...++.++...+..-.|.=...|++..+.+
T Consensus 317 g~~~--~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 317 GPIV--YNFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp S-EE--SSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred Ccee--CCHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 6666 48999999999999877665554444444442343345566555544
No 242
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=94.99 E-value=0.11 Score=65.02 Aligned_cols=148 Identities=15% Similarity=0.135 Sum_probs=107.1
Q ss_pred cCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc-----EEEEEecCCChhhhhccchHHHHHHHHHHHhc----
Q 001492 476 TNPHKPMILALSRPDPKKNITT-LLKAFGECRPLRELAN-----LTLIMGNRDDIEEMSSGNASVLITVLKLIDKY---- 545 (1067)
Q Consensus 476 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~-----l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~---- 545 (1067)
.+|+..+++++-|+...|...+ ++..+..+.++...|+ .++|.|+...... ......+..|+.+.+..
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~in~Dp 603 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGY--YMAKLIIKLINAVADVVNNDP 603 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCc--HHHHHHHHHHHHHHHHhccCh
Confidence 5788899999999999998777 6666555544444443 5566665422111 11245666777776642
Q ss_pred CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--CCceEE
Q 001492 546 DLYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNNGLL 619 (1067)
Q Consensus 546 ~l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 619 (1067)
.+.+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..=+=+|.-|.+.|+|..|+..|+.+. ..|+++
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 2344 78888776655566677777 99999887 69999999999999999999999999999887 789999
Q ss_pred eCCCCHHHHHH
Q 001492 620 VDPHDQQAIAD 630 (1067)
Q Consensus 620 v~p~d~~~la~ 630 (1067)
|- .+.+++.+
T Consensus 680 FG-~~~~ev~~ 689 (797)
T cd04300 680 FG-LTAEEVEA 689 (797)
T ss_pred eC-CCHHHHHH
Confidence 95 35666544
No 243
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=94.91 E-value=0.022 Score=59.92 Aligned_cols=47 Identities=13% Similarity=0.177 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCc
Q 001492 967 ASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVV 1016 (1067)
Q Consensus 967 asKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~ 1016 (1067)
-+|+.+++.+++++|++++++++ +||+.+ | ++|++.+|.++|+....
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVA-VGDSKN-D-LPMFEVADISISLGDEG 192 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEE-EcCCHh-H-HHHHHhcCCeEEECCCc
Confidence 46899999999999999999999 999999 9 99999999999997644
No 244
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=94.91 E-value=0.18 Score=54.33 Aligned_cols=44 Identities=9% Similarity=-0.010 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCC
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgN 1014 (1067)
.+...++.+++++|++++++++ |||+.+ | +++-+.+|..++.-+
T Consensus 149 p~~~~~~~~~~~~~~~~~~~~~-igDs~~-D-i~aA~~aG~~~i~v~ 192 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPLTCVA-LEDSFN-G-MIAAKAARMRSIVVP 192 (222)
T ss_pred CCHHHHHHHHHHcCCCHHHeEE-EcCChh-h-HHHHHHcCCEEEEec
Confidence 4567999999999999999999 999999 9 999999997665544
No 245
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=94.82 E-value=0.15 Score=63.62 Aligned_cols=40 Identities=8% Similarity=0.056 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.+-+..++++++|++.| + .+++.||-+...+..+.+++|+
T Consensus 441 p~R~~a~e~I~~Lr~~G----I-~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 441 VIKDGLVERFRELREMG----I-ETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred CCcHHHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCC
Confidence 35589999999999998 9 9999999999999999999887
No 246
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=94.24 E-value=0.047 Score=58.51 Aligned_cols=43 Identities=16% Similarity=0.288 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeC
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMK 1013 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMg 1013 (1067)
.|...++.++++++++++++++ |||+.+ | ++|++.+|.+|+|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-i~aa~~ag~~i~~~ 194 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVA-VGDGAN-D-LSMIKAAGLGIAFN 194 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEE-EECCHH-H-HHHHHhCCCeEEeC
Confidence 4899999999999999999999 999999 9 99999999999994
No 247
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=94.23 E-value=0.23 Score=61.27 Aligned_cols=99 Identities=14% Similarity=0.225 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHhcCCcEEEEEeeCC-------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCC
Q 001492 932 ARRIDDLRQKLRMRGLRCHPMYCRNS-------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTD 998 (1067)
Q Consensus 932 ~~~~~el~~~L~~~~~~~~v~~s~~~-------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D 998 (1067)
.+.+.+.-+.|+..+..+.++...+. .+-++.| -.|...++.+.. +.++++. +||+.| |
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~~~~~~~p--~~K~~~v~~l~~----~~~~v~~-VGDg~n-D 478 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGINVRAEVLP--DDKAALIKELQE----KGRVVAM-VGDGIN-D 478 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcEEccCCh--HHHHHHHHHHHH----cCCEEEE-EeCCCc-c
Confidence 34456667777777766654433211 1223334 268888877765 3456766 999999 9
Q ss_pred hhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHH
Q 001492 999 YEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANAL 1057 (1067)
Q Consensus 999 ~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al 1057 (1067)
.+|++.++.||+||++. +..+..|+ ++-.+.+-++|..++
T Consensus 479 -~~al~~A~vgia~g~g~---~~a~~~Ad---------------vvl~~~~l~~l~~~i 518 (562)
T TIGR01511 479 -APALAQADVGIAIGAGT---DVAIEAAD---------------VVLMRNDLNDVATAI 518 (562)
T ss_pred -HHHHhhCCEEEEeCCcC---HHHHhhCC---------------EEEeCCCHHHHHHHH
Confidence 99999999999999876 33444554 444334556666655
No 248
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.21 E-value=0.12 Score=55.52 Aligned_cols=40 Identities=8% Similarity=-0.029 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHH---HHHHHHhcCCC
Q 001492 795 MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSE---TIEFLNSMKIE 839 (1067)
Q Consensus 795 i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~---~~~~l~~l~i~ 839 (1067)
..+.++++++.++++| + .|+++|||+... +.+.|...|++
T Consensus 121 aip~al~l~~~l~~~G----~-~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 121 ALPEGLKLYQKIIELG----I-KIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCHHHHHHHHHHHHCC----C-EEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 3467888999999997 7 899999999766 77888888874
No 249
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.19 E-value=0.074 Score=58.17 Aligned_cols=65 Identities=15% Similarity=0.100 Sum_probs=46.3
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHH--HHHHHHHhcCCCCCCCCEEEEc
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVS--ETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~--~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
.+.+|+|||+.+. ..+.+.+.++|++|+++| + .++|+|..+.. .+.+.++.+|++...|+.++++
T Consensus 10 ~~~~D~dG~l~~~-~~~~pga~e~L~~L~~~G----~-~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s 76 (242)
T TIGR01459 10 VFLLDLWGVIIDG-NHTYPGAVQNLNKIIAQG----K-PVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS 76 (242)
T ss_pred EEEEecccccccC-CccCccHHHHHHHHHHCC----C-EEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc
Confidence 3444999997765 356789999999999997 6 78886654443 4447889999862146666664
No 250
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=94.19 E-value=0.19 Score=61.93 Aligned_cols=101 Identities=12% Similarity=0.162 Sum_probs=67.1
Q ss_pred chHHHHHHHHHHHhcC-CcEEEEEeeCC--------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCC
Q 001492 931 KARRIDDLRQKLRMRG-LRCHPMYCRNS--------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESG 995 (1067)
Q Consensus 931 ~~~~~~el~~~L~~~~-~~~~v~~s~~~--------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~ 995 (1067)
..+.+.++-+.|+..+ .++.++...+. .+-++.| -.|...++.+.. ..+++++ +||+.
T Consensus 385 ~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p--~~K~~~v~~l~~----~~~~v~~-vGDg~ 457 (556)
T TIGR01525 385 LRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLP--EDKLAIVKELQE----EGGVVAM-VGDGI 457 (556)
T ss_pred chHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCH--HHHHHHHHHHHH----cCCEEEE-EECCh
Confidence 3445667777787777 66655444321 1223333 257777777654 3456766 99999
Q ss_pred CCChhhhhcCCceEEEeCCCcccchhhhhcccCcCCCCCCCCCCCceeecCcccHHHHHHHHH
Q 001492 996 DTDYEELISGAHKTLIMKGVVEKGSEELLRTTNLRDDIVPSESPLIAHVNANAKVDEIANALR 1058 (1067)
Q Consensus 996 N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt~~~~~dgI~~al~ 1058 (1067)
| | .+|++.+|.||+||++. +..+..|+ ++-.+.+-++|..+++
T Consensus 458 n-D-~~al~~A~vgia~g~~~---~~~~~~Ad---------------~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 458 N-D-APALAAADVGIAMGAGS---DVAIEAAD---------------IVLLNDDLSSLPTAID 500 (556)
T ss_pred h-H-HHHHhhCCEeEEeCCCC---HHHHHhCC---------------EEEeCCCHHHHHHHHH
Confidence 9 9 99999999999999766 33444555 5655666778777763
No 251
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=94.12 E-value=0.1 Score=64.96 Aligned_cols=147 Identities=15% Similarity=0.168 Sum_probs=106.9
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc-----EEEEEecC--CChhhhhccchHHHHHHHHHHHhcC
Q 001492 475 LTNPHKPMILALSRPDPKKNITT-LLKAFGECRPLRELAN-----LTLIMGNR--DDIEEMSSGNASVLITVLKLIDKYD 546 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~-----l~lIvG~~--~~~~~l~~~~~~~~~~i~~l~~~~~ 546 (1067)
..+|+..+++++-|+...|...+ ++.....+.++...|+ .++|.|+. |.+.. ....+..|+..++..+
T Consensus 524 ~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~----aK~iIklI~~va~~in 599 (798)
T PRK14985 524 EINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL----AKNIIFAINKVAEVIN 599 (798)
T ss_pred ccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH----HHHHHHHHHHHHHHhc
Confidence 35678888999999999998777 7666665554455543 55655554 33222 2446666777765542
Q ss_pred ----CCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--CCc
Q 001492 547 ----LYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNN 616 (1067)
Q Consensus 547 ----l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--~~~ 616 (1067)
..+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..=+=+|.-|.+.++|-.|...|+.+. +.|
T Consensus 600 ~Dp~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN 675 (798)
T PRK14985 600 NDPLVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEEN 675 (798)
T ss_pred CChhhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCc
Confidence 233 78888877655566677777 99999887 69999999999999999999999999999876 789
Q ss_pred eEEeCCCCHHHHHH
Q 001492 617 GLLVDPHDQQAIAD 630 (1067)
Q Consensus 617 Gllv~p~d~~~la~ 630 (1067)
|+++-. +.+++.+
T Consensus 676 ~f~fG~-~~~ev~~ 688 (798)
T PRK14985 676 IFIFGH-TVEQVKA 688 (798)
T ss_pred EEEeCC-CHHHHHH
Confidence 999964 5665544
No 252
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=93.97 E-value=0.046 Score=57.77 Aligned_cols=49 Identities=16% Similarity=0.189 Sum_probs=44.2
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCC
Q 001492 963 VPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014 (1067)
Q Consensus 963 ~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgN 1014 (1067)
.+.+-.|..+++.++++.+++++++++ +||+.+ | ++|++.+|.++++..
T Consensus 150 ~~~g~~K~~~l~~~~~~~~~~~~~~~~-~gDs~~-D-~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 150 NCKGEGKVHALAELLAEEQIDLKDSYA-YGDSIS-D-LPLLSLVGHPYVVNP 198 (202)
T ss_pred CCCChHHHHHHHHHHHHcCCCHHHcEe-eeCCcc-c-HHHHHhCCCcEEeCC
Confidence 345678999999999999999999999 999999 9 999999999998764
No 253
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=93.89 E-value=0.14 Score=64.01 Aligned_cols=148 Identities=13% Similarity=0.113 Sum_probs=107.2
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc-----EEEEEecC--CChhhhhccchHHHHHHHHHHHhc-
Q 001492 475 LTNPHKPMILALSRPDPKKNITT-LLKAFGECRPLRELAN-----LTLIMGNR--DDIEEMSSGNASVLITVLKLIDKY- 545 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~-----l~lIvG~~--~~~~~l~~~~~~~~~~i~~l~~~~- 545 (1067)
..+|+...++++-|+...|...+ ++..+..+.++...|+ .++|.|+. |.+.. ....+..|+..++..
T Consensus 522 ~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~----aK~iIklI~~va~~iN 597 (794)
T TIGR02093 522 EVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHM----AKLIIKLINSVAEVVN 597 (794)
T ss_pred ccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHH----HHHHHHHHHHHHHHhc
Confidence 45678888999999999998777 6666665554454432 35555554 22222 244666677666442
Q ss_pred ---CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--CCc
Q 001492 546 ---DLYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNN 616 (1067)
Q Consensus 546 ---~l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--~~~ 616 (1067)
...+ +|.|+....-+--..++.+| ||-.+.|. .|..|..=+=+|.-|.+.|+|..|+..|+.++ ..|
T Consensus 598 ~Dp~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN 673 (794)
T TIGR02093 598 NDPAVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAEN 673 (794)
T ss_pred cChhhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCccc
Confidence 2334 78888877666566677777 99999887 69999999999999999999999999999877 789
Q ss_pred eEEeCCCCHHHHHHH
Q 001492 617 GLLVDPHDQQAIADA 631 (1067)
Q Consensus 617 Gllv~p~d~~~la~a 631 (1067)
+++|- .+.+++.+-
T Consensus 674 ~fiFG-~~~~ev~~~ 687 (794)
T TIGR02093 674 IFIFG-LTVEEVEAL 687 (794)
T ss_pred EEEcC-CCHHHHHHH
Confidence 99995 466666544
No 254
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=93.81 E-value=0.05 Score=55.72 Aligned_cols=90 Identities=20% Similarity=0.206 Sum_probs=59.5
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC--------chhhhccCCceEEe
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG--------PVDIHRALNNGLLV 620 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg--------~~eiv~~~~~Gllv 620 (1067)
.+|.+.++. +++.++|+.| |++|.- +-+.|+.|++++|+|+|.-...+ ....+.....|+.+
T Consensus 55 ~~v~~~~~~--~~m~~~m~~a----DlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGFV--DNMAELMAAA----DLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECSS--SSHHHHHHHH----SEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEech--hhHHHHHHHc----CEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 578888884 5799999999 988853 34589999999999988765544 12223333344444
Q ss_pred CCC--CHHHHHHHHHHhhcCHHHHHHHHHH
Q 001492 621 DPH--DQQAIADALLKLVSEKNLWVECRKN 648 (1067)
Q Consensus 621 ~p~--d~~~la~aL~~ll~d~~~~~~~~~~ 648 (1067)
... +++.|.++|.+++.++.....+.++
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~ 154 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAKA 154 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 322 3678999999999999876665444
No 255
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=93.70 E-value=0.36 Score=59.71 Aligned_cols=147 Identities=13% Similarity=0.183 Sum_probs=88.7
Q ss_pred cCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCh-hhhhccchHHHHHHHHHHHhc---
Q 001492 476 TNPHKPMILALSRPDPKKNITT-LLKAFGECRPLRELA-----NLTLIMGNRDDI-EEMSSGNASVLITVLKLIDKY--- 545 (1067)
Q Consensus 476 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~-----~l~lIvG~~~~~-~~l~~~~~~~~~~i~~l~~~~--- 545 (1067)
.+|+..+++++-|+...|...+ ++..+..+.++...| .+++|+|+.... +.+ ..+++..|+.+++..
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~---gK~iIk~I~~va~~in~D 516 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYM---GKEIIKLINNVAEVINND 516 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HH---HHHHHHHHHHHHHHHCT-
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHH---HHHHHHHHHHHHHHHhcC
Confidence 5678888999999999998776 344333332222222 245555544221 111 234566666665532
Q ss_pred -CCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCCEEEcCCCCchhhhcc--CCceE
Q 001492 546 -DLYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL--VEPFGLTLIEAAAHGLPMVATKNGGPVDIHRA--LNNGL 618 (1067)
Q Consensus 546 -~l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~--~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~--~~~Gl 618 (1067)
.+.+ +|.|+.-.+-+--..++.+| ||-++.|. .|..|..-+=+|.-|.+.++|..|...|+.+. .+|.+
T Consensus 517 p~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~f 592 (713)
T PF00343_consen 517 PEVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIF 592 (713)
T ss_dssp TTTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSE
T ss_pred hhhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEE
Confidence 2333 68887776554455566677 99999987 69999999999999999999999999999764 35788
Q ss_pred EeCCCCHHHHHH
Q 001492 619 LVDPHDQQAIAD 630 (1067)
Q Consensus 619 lv~p~d~~~la~ 630 (1067)
++- .+.+++.+
T Consensus 593 iFG-~~~~ev~~ 603 (713)
T PF00343_consen 593 IFG-LTAEEVEE 603 (713)
T ss_dssp EES--BHHHHHH
T ss_pred EcC-CCHHHHHH
Confidence 885 45666543
No 256
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=93.56 E-value=0.2 Score=50.58 Aligned_cols=77 Identities=17% Similarity=0.063 Sum_probs=44.6
Q ss_pred CceEEEEcCC-chhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeC
Q 001492 305 WPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITS 383 (1067)
Q Consensus 305 ~pDvIh~h~~-~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~ 383 (1067)
.+|+|.+... +.+....+....-++|.++.+|.---.+ .......-+..|.+..- ...-.||.|+..
T Consensus 59 ~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~Y-------P~~~~~~rd~~~~~~ni-----~saLaAD~v~FN 126 (168)
T PF12038_consen 59 SYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAY-------PVSPGQERDFQYGMNNI-----YSALAADRVVFN 126 (168)
T ss_pred CCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccC-------CCCCCccccccHHHHHH-----HHHHhceeeeec
Confidence 4799999875 4444444444556799999999741111 11011111223333322 245689999999
Q ss_pred CHHHHHHHHh
Q 001492 384 TKQEIDEQWG 393 (1067)
Q Consensus 384 S~~~~~~~~~ 393 (1067)
|....+.+..
T Consensus 127 S~~nr~sFL~ 136 (168)
T PF12038_consen 127 SAFNRDSFLD 136 (168)
T ss_pred chhhHHHHHH
Confidence 9876665543
No 257
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=93.54 E-value=0.22 Score=50.33 Aligned_cols=62 Identities=11% Similarity=0.127 Sum_probs=45.4
Q ss_pred EEEeCCCCCCCCc-----------hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHH---HHHHHhc-----CCCC
Q 001492 780 IALDCYDSKGAPD-----------KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSET---IEFLNSM-----KIEA 840 (1067)
Q Consensus 780 ia~DiDGTLl~~~-----------~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~---~~~l~~l-----~i~~ 840 (1067)
+.+|+|||+..++ ....+...++...++++| . +|+..|+|+.... +.||... ++|
T Consensus 2 VvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~G----Y-~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP- 75 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNG----Y-KILYLTARPIGQANRTRSWLAQHQQQGHNLP- 75 (157)
T ss_pred EEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCC----e-EEEEECcCcHHHHHHHHHHHHHHHhCCccCC-
Confidence 4569999966542 145678889999999997 6 8999999997654 5788876 554
Q ss_pred CCCCEEEEc
Q 001492 841 NEFDALICS 849 (1067)
Q Consensus 841 ~~~d~~I~~ 849 (1067)
++.++++
T Consensus 76 --~Gpv~~s 82 (157)
T PF08235_consen 76 --DGPVLLS 82 (157)
T ss_pred --CCCEEEC
Confidence 3445554
No 258
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=93.44 E-value=0.28 Score=53.35 Aligned_cols=37 Identities=5% Similarity=0.006 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhcCCCCceeEEEEECCCC----HHHHHHHHHhcCCC
Q 001492 798 IMYDVFKAVRLDHQTARVTGFALSTAMP----VSETIEFLNSMKIE 839 (1067)
Q Consensus 798 ~~~~al~~l~~~g~~g~i~~~vIaTGR~----~~~~~~~l~~l~i~ 839 (1067)
..+++|+.++++| + .++++|||+ ...+..+++.++++
T Consensus 118 Ga~elL~~L~~~G----~-~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 118 VARQLIDMHVKRG----D-SIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred HHHHHHHHHHHCC----C-eEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 3789999999987 7 899999996 33555666668884
No 259
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=93.33 E-value=0.31 Score=59.89 Aligned_cols=84 Identities=10% Similarity=0.161 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHhcCC-cEEEEEeeCC--------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCC
Q 001492 932 ARRIDDLRQKLRMRGL-RCHPMYCRNS--------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGD 996 (1067)
Q Consensus 932 ~~~~~el~~~L~~~~~-~~~v~~s~~~--------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N 996 (1067)
.+.+.+.-+.|+..+. ++.++...+. .+-++.|. .|...++.+... .++++. +||+.|
T Consensus 364 ~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p~--~K~~~i~~l~~~----~~~v~~-vGDg~n 436 (536)
T TIGR01512 364 RPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLPE--DKLEIVKELREK----YGPVAM-VGDGIN 436 (536)
T ss_pred hHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCcH--HHHHHHHHHHhc----CCEEEE-EeCCHH
Confidence 4456677777877777 6666544321 12344443 687777776543 356766 999999
Q ss_pred CChhhhhcCCceEEEeC-CCcccchhhhhccc
Q 001492 997 TDYEELISGAHKTLIMK-GVVEKGSEELLRTT 1027 (1067)
Q Consensus 997 ~D~~eML~~ag~gVaMg-NA~e~~~~~~~~a~ 1027 (1067)
| .+|++.++.||+|| ++. +..+..++
T Consensus 437 -D-~~al~~A~vgia~g~~~~---~~~~~~ad 463 (536)
T TIGR01512 437 -D-APALAAADVGIAMGASGS---DVAIETAD 463 (536)
T ss_pred -H-HHHHHhCCEEEEeCCCcc---HHHHHhCC
Confidence 9 99999999999999 554 44445555
No 260
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=93.20 E-value=0.053 Score=55.86 Aligned_cols=42 Identities=17% Similarity=0.322 Sum_probs=37.8
Q ss_pred EecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCC
Q 001492 962 IVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA 1006 (1067)
Q Consensus 962 I~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~a 1006 (1067)
..+.+.+|+.+++.+++.+|++++++++ |||+.| | ++|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~-iGDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIA-VGDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEE-EeCCHH-H-HHHHhcC
Confidence 3567889999999999999999999999 999999 9 9999864
No 261
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=92.66 E-value=0.22 Score=53.38 Aligned_cols=43 Identities=7% Similarity=0.067 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCC-CCChhhhhcCCceE-EEeCC
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESG-DTDYEELISGAHKT-LIMKG 1014 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~-N~D~~eML~~ag~g-VaMgN 1014 (1067)
+....+.+++++|++++++++ |||+. + | +..=+.+|.. |.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-igDs~~~-d-i~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVM-VGDRLDK-D-IKGAKNLGMKTVWINQ 196 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEE-ECCChHH-H-HHHHHHCCCEEEEECC
Confidence 456899999999999999999 99997 8 9 9888888864 44443
No 262
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.54 E-value=0.34 Score=53.54 Aligned_cols=48 Identities=10% Similarity=0.072 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHH---HHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVS---ETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~---~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.++++| + .++|+|+|+.. .+...|+.+|++...++.++..
T Consensus 121 pGA~e~L~~L~~~G----~-~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr 171 (266)
T TIGR01533 121 AGALDFLNYANSKG----V-KIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLK 171 (266)
T ss_pred ccHHHHHHHHHHCC----C-eEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeC
Confidence 56688999999987 7 79999999843 4558888888864234555554
No 263
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=92.53 E-value=0.16 Score=57.31 Aligned_cols=56 Identities=5% Similarity=0.027 Sum_probs=45.2
Q ss_pred EEEEeCCCCCCCC------------chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 779 VIALDCYDSKGAP------------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 779 lia~DiDGTLl~~------------~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
++.+|+|||+... +..+.+.+.++|+.|+++| + .++|+|||+.......++.+++.
T Consensus 160 ~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----~-~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 160 AVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAG----Y-EIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred EEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCC----C-EEEEEeCCChhhHHHHHHHHHHc
Confidence 3444999996642 2356789999999999987 7 89999999999999888887763
No 264
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=92.48 E-value=0.34 Score=61.71 Aligned_cols=80 Identities=15% Similarity=0.185 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEeeCC--------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCh
Q 001492 934 RIDDLRQKLRMRGLRCHPMYCRNS--------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDY 999 (1067)
Q Consensus 934 ~~~el~~~L~~~~~~~~v~~s~~~--------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~ 999 (1067)
...+..+.|+..+.++.+ .++++ .+.++.|. .|...++.|.+. .+++. +||+-| |
T Consensus 572 ~a~~~i~~L~~~gi~~~l-lTGd~~~~a~~ia~~lgi~~~~~~~p~--~K~~~v~~l~~~-----~~v~m-vGDgiN-D- 640 (741)
T PRK11033 572 DARQAISELKALGIKGVM-LTGDNPRAAAAIAGELGIDFRAGLLPE--DKVKAVTELNQH-----APLAM-VGDGIN-D- 640 (741)
T ss_pred hHHHHHHHHHHCCCEEEE-EcCCCHHHHHHHHHHcCCCeecCCCHH--HHHHHHHHHhcC-----CCEEE-EECCHH-h-
Confidence 455666667666665543 33322 13345554 699999887642 34555 999999 9
Q ss_pred hhhhcCCceEEEeCCCcccchhhhhccc
Q 001492 1000 EELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 1000 ~eML~~ag~gVaMgNA~e~~~~~~~~a~ 1027 (1067)
.++|+.++.||+||++. +..+..|+
T Consensus 641 apAl~~A~vgia~g~~~---~~a~~~ad 665 (741)
T PRK11033 641 APAMKAASIGIAMGSGT---DVALETAD 665 (741)
T ss_pred HHHHHhCCeeEEecCCC---HHHHHhCC
Confidence 99999999999999987 33444454
No 265
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=92.40 E-value=0.82 Score=55.15 Aligned_cols=41 Identities=22% Similarity=0.394 Sum_probs=33.3
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE-EeCC
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL-IMKG 1014 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV-aMgN 1014 (1067)
-|++-++-|.++-|-- +.| +||+|| | .+|++.|+.|| +.|+
T Consensus 768 QKA~v~~llq~~t~kr---vc~-IGDGGN-D-VsMIq~A~~GiGI~gk 809 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGKR---VCA-IGDGGN-D-VSMIQAADVGIGIVGK 809 (1051)
T ss_pred HHHHHHHHHHHhhCce---EEE-EcCCCc-c-chheeecccceeeecc
Confidence 6999999999988733 656 999999 9 99999987776 3444
No 266
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=92.38 E-value=0.21 Score=50.16 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=39.5
Q ss_pred EEEeCCCCCCCCch----------hhHHHHHHHHHHHHhcCCCCceeEEEEECCCC---------------HHHHHHHHH
Q 001492 780 IALDCYDSKGAPDK----------KMIQIMYDVFKAVRLDHQTARVTGFALSTAMP---------------VSETIEFLN 834 (1067)
Q Consensus 780 ia~DiDGTLl~~~~----------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~---------------~~~~~~~l~ 834 (1067)
+++|+||||.+... ++-+.+.++|+.|+++| + .++|+|..+ ...+...++
T Consensus 3 ~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g----~-~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (147)
T TIGR01656 3 LFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAG----Y-TVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLR 77 (147)
T ss_pred EEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCC----C-EEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHH
Confidence 44599999766432 24577889999999997 7 789999765 245666777
Q ss_pred hcCC
Q 001492 835 SMKI 838 (1067)
Q Consensus 835 ~l~i 838 (1067)
.+++
T Consensus 78 ~~~l 81 (147)
T TIGR01656 78 QLGV 81 (147)
T ss_pred hCCC
Confidence 7666
No 267
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=92.38 E-value=2.6 Score=52.42 Aligned_cols=37 Identities=11% Similarity=0.067 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
++++++++.+++.| | .|...||-+..++..+.+++|+
T Consensus 587 ~ev~~ai~~c~~aG----I-rV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 587 PEVADAIELCRQAG----I-RVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred hhHHHHHHHHHHcC----C-EEEEEcCCCHHHHHHHHHHhCC
Confidence 78899999999998 9 9999999999999999999876
No 268
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=92.24 E-value=0.64 Score=53.98 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
+...+.+.++++|++++++++ |||+.+ | ++.=+.+|..++.
T Consensus 274 ~Peifl~A~~~lgl~Peecl~-IGDS~~-D-IeAAk~AGm~~Ig 314 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIV-FGNSNQ-T-VEAAHDARMKCVA 314 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 567889999999999999999 999999 9 9999988865443
No 269
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=92.18 E-value=0.14 Score=50.95 Aligned_cols=60 Identities=10% Similarity=-0.004 Sum_probs=43.7
Q ss_pred CeEEEEEEeCCCCCCC------Cch----hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 775 RRLIVIALDCYDSKGA------PDK----KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 775 ~klllia~DiDGTLl~------~~~----~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+++-++.+|+||||.+ ++. .+.-.-=-.|+.+.+.| + .+.|.|||.-..+..-+++|||+
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~G----i-~vAIITGr~s~ive~Ra~~LGI~ 75 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSG----I-KVAIITGRDSPIVEKRAKDLGIK 75 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcC----C-eEEEEeCCCCHHHHHHHHHcCCc
Confidence 3555666699999765 111 12222224678888887 8 99999999999999999999995
No 270
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=92.15 E-value=0.37 Score=58.56 Aligned_cols=92 Identities=18% Similarity=0.194 Sum_probs=56.9
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhhccCCceEEeCCC-
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRALNNGLLVDPH- 623 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv~~~~~Gllv~p~- 623 (1067)
+++....++|+.+ +++.. ..++||.= |--.++.||+.+|+|+|+-..-| ....+.+...|+.++..
T Consensus 323 ~n~~~~~W~PQ~~---lL~hp--~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVKWLPQND---LLAHP--RVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEESS--HHH---HHTST--TEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEeccccchh---hhhcc--cceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 4788889998754 45443 11455522 33468999999999999976532 23344455668888644
Q ss_pred -CHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 001492 624 -DQQAIADALLKLVSEKNLWVECRKNGWKNI 653 (1067)
Q Consensus 624 -d~~~la~aL~~ll~d~~~~~~~~~~~~~~~ 653 (1067)
+.+++.++|.++++|+.. ++++.+..
T Consensus 394 ~~~~~l~~ai~~vl~~~~y----~~~a~~ls 420 (500)
T PF00201_consen 394 LTEEELRAAIREVLENPSY----KENAKRLS 420 (500)
T ss_dssp -SHHHHHHHHHHHHHSHHH----HHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhhHH----HHHHHHHH
Confidence 568899999999999854 44444443
No 271
>PLN03190 aminophospholipid translocase; Provisional
Probab=92.02 E-value=0.67 Score=61.69 Aligned_cols=40 Identities=18% Similarity=0.114 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.+.+.+.++|+.|++.| + .+.+.||-....+..+..+.++
T Consensus 726 ~lr~~v~~~I~~l~~ag----i-~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAG----I-KVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred CCchhHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHhCC
Confidence 45688899999999997 8 9999999999999999999887
No 272
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=91.81 E-value=0.18 Score=52.56 Aligned_cols=38 Identities=5% Similarity=0.147 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+.+.+.|+.+++.| + .++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~~----~-~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDNG----I-KVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHTT----S-EEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHCC----C-EEEEECCCcHHHHHHHHHHcCCC
Confidence 45668888888886 7 79999999999999999998874
No 273
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=91.80 E-value=0.35 Score=49.90 Aligned_cols=55 Identities=11% Similarity=0.115 Sum_probs=42.4
Q ss_pred EEEEeCCCCCCCCch-hhHHHHHHHHHHHHhcCCCCceeEEEEECCCC-HHHHHHHHHhcCC
Q 001492 779 VIALDCYDSKGAPDK-KMIQIMYDVFKAVRLDHQTARVTGFALSTAMP-VSETIEFLNSMKI 838 (1067)
Q Consensus 779 lia~DiDGTLl~~~~-~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~-~~~~~~~l~~l~i 838 (1067)
++++|+|||+...+. .+.+.+.++|+.|++.| + .++|+|+.+ ...+..+++.+++
T Consensus 27 ~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~g----~-~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 27 GVVLDKDNTLVYPDHNEAYPALRDWIEELKAAG----R-KLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred EEEEecCCccccCCCCCcChhHHHHHHHHHHcC----C-EEEEEeCCchHHHHHHHHHHcCC
Confidence 444499999776543 67789999999999987 7 899999988 5666666677554
No 274
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=91.53 E-value=0.39 Score=49.69 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHhcCCCCceeEEEEECCC-CHHHHHHHHHhcCCC
Q 001492 795 MIQIMYDVFKAVRLDHQTARVTGFALSTAM-PVSETIEFLNSMKIE 839 (1067)
Q Consensus 795 i~~~~~~al~~l~~~g~~g~i~~~vIaTGR-~~~~~~~~l~~l~i~ 839 (1067)
+-+.+.++|+.|+++| + .++|+|+. +...+..+++.+++.
T Consensus 46 l~pGv~elL~~Lk~~G----~-~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 46 LIKEVRDVLQTLKDAG----T-YLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred EcccHHHHHHHHHHCC----C-EEEEEeCCCChHHHHHHHHhCCcC
Confidence 3477899999999987 7 89999988 888888999998873
No 275
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.34 E-value=2.3 Score=46.90 Aligned_cols=142 Identities=21% Similarity=0.275 Sum_probs=83.9
Q ss_pred eC-CCCCCCHHHHHHHHHhcccccCCCcEEE---EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCC------C
Q 001492 487 SR-PDPKKNITTLLKAFGECRPLRELANLTL---IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPK------H 556 (1067)
Q Consensus 487 gR-ld~~Kgi~~ll~A~~~l~~l~~~~~l~l---IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g------~ 556 (1067)
+| ++...|+..++.++..+.. ....+++ ++..-+ +..+..+..+.+|.+.-...+ +
T Consensus 234 sR~pea~~nl~~il~slcal~~--~~a~vvfw~ai~~~lp------------l~~l~~l~e~~gWq~~ad~~~kdnc~l~ 299 (412)
T COG4370 234 SRVPEAQTNLAVILGSLCALPA--MFALVVFWAAIAPELP------------LLLLWTLEERQGWQPLADRFGKDNCSLW 299 (412)
T ss_pred CCChHHHhhHHHHHHHHhhhHH--HHHHHHHHhccCcCCC------------HHHHHHHHHhcCcchhhhhhccCceEEE
Confidence 45 5667899999987766632 1122111 222222 233344555555543222111 3
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCC-CHHHHHHHHcCCCEEEcCCCCch------hhhc--cCCceEEeCCCCHHH
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPF-GLTLIEAAAHGLPMVATKNGGPV------DIHR--ALNNGLLVDPHDQQA 627 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~Egf-gltllEAmA~G~PVVat~~Gg~~------eiv~--~~~~Gllv~p~d~~~ 627 (1067)
+++....+++..| |+.+ +| |...-.|+..|+|||+...-|+. +--. -+..=.+++|. .++
T Consensus 300 lsqqsfadiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~-aq~ 368 (412)
T COG4370 300 LSQQSFADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPE-AQA 368 (412)
T ss_pred EeHHHHHHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCc-hhh
Confidence 4567889999999 7755 34 33344467779999998765542 2100 02234566653 344
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHH
Q 001492 628 IADALLKLVSEKNLWVECRKNGWKNI 653 (1067)
Q Consensus 628 la~aL~~ll~d~~~~~~~~~~~~~~~ 653 (1067)
-+.+..+++.||+..+.++.|+++++
T Consensus 369 a~~~~q~ll~dp~r~~air~nGqrRi 394 (412)
T COG4370 369 AAQAVQELLGDPQRLTAIRHNGQRRI 394 (412)
T ss_pred HHHHHHHHhcChHHHHHHHhcchhhc
Confidence 34445559999999999999999998
No 276
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=91.28 E-value=23 Score=38.88 Aligned_cols=141 Identities=15% Similarity=0.123 Sum_probs=75.8
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHH-----------HHhcCCC--Cc
Q 001492 484 LALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKL-----------IDKYDLY--GQ 550 (1067)
Q Consensus 484 l~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l-----------~~~~~l~--~~ 550 (1067)
+++||..-.||...+++.-+.. +.+ +++.-++-+-+. . .. .-.|... +++..+. ..
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~--lK~-~~~~t~~~Gier------S-~A-~~~i~d~~~~~~y~~~~~~~~~~~~pN~~ 255 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKI--LKP-AGFKTIMEGIER------S-PA-KISIKDHGIPYEYYPKLDCDEPKPAPNSP 255 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHT--TTT-TT-EEEEE---S------S-TH-HHHHHHTT--EEEE-CTGGGG---SSS--
T ss_pred eeeeeeeeecCcHHHhhhHHHh--cCC-cchhHHhhhhhc------C-Cc-eeeeecCCcccccCccccccCcccCCCCc
Confidence 8999999999999999999886 334 777665544321 0 00 1111111 1111111 23
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecC------CCCCCCHHHHHHHHcCC-CEEEcCCCCchh-------hhccCCc
Q 001492 551 VAYPKHHKQYDVPEIYRLAAKTKGVFINPA------LVEPFGLTLIEAAAHGL-PMVATKNGGPVD-------IHRALNN 616 (1067)
Q Consensus 551 V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps------~~EgfgltllEAmA~G~-PVVat~~Gg~~e-------iv~~~~~ 616 (1067)
+-.+|..-.+|.-+.++.+ .....-+ +.+.+-.+-+|..|||. ||.-...|...- ++..-..
T Consensus 256 ~~v~~~Yi~~E~~~~Maks----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~ 331 (355)
T PF11440_consen 256 VPVYGPYIRSEGLERMAKS----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYS 331 (355)
T ss_dssp EEEESS--HHHHHHHHHTE----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S
T ss_pred ceecchhhhHHHHHHHhhc----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcc
Confidence 5556666677777888877 3333222 13568889999999996 666665554322 3334456
Q ss_pred eEEeCCCCHHHHHHHHHHhhcCH
Q 001492 617 GLLVDPHDQQAIADALLKLVSEK 639 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~d~ 639 (1067)
.+.++-+|.++-.+.|.++-++.
T Consensus 332 ~I~~De~dle~T~ekl~E~a~~~ 354 (355)
T PF11440_consen 332 AIYFDENDLESTVEKLIEVANNR 354 (355)
T ss_dssp -EEE-TTSHHHHHHHHHHHHT-H
T ss_pred eeEeccchHHHHHHHHHHHhccC
Confidence 78899999999999998876653
No 277
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=91.26 E-value=0.38 Score=49.80 Aligned_cols=34 Identities=12% Similarity=0.131 Sum_probs=27.5
Q ss_pred HHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE
Q 001492 974 RYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL 1010 (1067)
Q Consensus 974 ~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV 1010 (1067)
...++++|++++++++ |||+.. | ++.=+.+|..+
T Consensus 113 ~~a~~~~~~~~~~~v~-VGDs~~-D-i~aA~~aG~~~ 146 (176)
T TIGR00213 113 LQARKELHIDMAQSYM-VGDKLE-D-MQAGVAAKVKT 146 (176)
T ss_pred HHHHHHcCcChhhEEE-EcCCHH-H-HHHHHHCCCcE
Confidence 5566777888999988 999988 8 88888888754
No 278
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=91.22 E-value=0.41 Score=48.98 Aligned_cols=62 Identities=15% Similarity=0.220 Sum_probs=43.1
Q ss_pred eEEEEEEeCCCCCCCCch-----------hhHHHHHHHHHHHHhcCCCCceeEEEEECCC---------------CHHHH
Q 001492 776 RLIVIALDCYDSKGAPDK-----------KMIQIMYDVFKAVRLDHQTARVTGFALSTAM---------------PVSET 829 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~-----------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR---------------~~~~~ 829 (1067)
++++| |.||||..... .+-+.+.++|++|+++| + .++|+|-- ....+
T Consensus 2 ~~~~~--d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g----~-~l~IvSN~~g~~~~~~~~~~~~~~~~~~ 74 (161)
T TIGR01261 2 KILFI--DRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAG----Y-KFVMVTNQDGLGTPSFPQADFDGPHNLM 74 (161)
T ss_pred CEEEE--eCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCC----C-eEEEEeCCccccCCcCCHHHHHHHHHHH
Confidence 56666 99999665211 23366889999999987 6 78888864 24567
Q ss_pred HHHHHhcCCCCCCCCEEE
Q 001492 830 IEFLNSMKIEANEFDALI 847 (1067)
Q Consensus 830 ~~~l~~l~i~~~~~d~~I 847 (1067)
..+++.+|+. ||.++
T Consensus 75 ~~~l~~~gl~---fd~ii 89 (161)
T TIGR01261 75 LQIFRSQGII---FDDVL 89 (161)
T ss_pred HHHHHHCCCc---eeEEE
Confidence 7788988874 55443
No 279
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=90.90 E-value=0.47 Score=57.51 Aligned_cols=68 Identities=9% Similarity=0.133 Sum_probs=49.0
Q ss_pred cCCeEEEEEEeCCCCCCCCch-----------h-hHHHHHHHHHHHHhcCCCCceeEEEEECCCCH------------HH
Q 001492 773 RRRRLIVIALDCYDSKGAPDK-----------K-MIQIMYDVFKAVRLDHQTARVTGFALSTAMPV------------SE 828 (1067)
Q Consensus 773 ~r~klllia~DiDGTLl~~~~-----------~-i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~------------~~ 828 (1067)
.+.|+++| |+||||..... + +.+.+.++|++|+++| + .++|+|.-+- ..
T Consensus 166 ~~~Kia~f--D~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~G----y-~IvIvTNQ~gI~~G~~~~~~~~~k 238 (526)
T TIGR01663 166 GQEKIAGF--DLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADG----F-KICIFTNQGGIARGKINADDFKAK 238 (526)
T ss_pred ccCcEEEE--ECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCC----C-EEEEEECCcccccCcccHHHHHHH
Confidence 34476666 99999664311 1 3467889999999997 6 7888887544 34
Q ss_pred HHHHHHhcCCCCCCCCEEEEcC
Q 001492 829 TIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 829 ~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+..+++.++++ ++.++|..
T Consensus 239 i~~iL~~lgip---fdviia~~ 257 (526)
T TIGR01663 239 IEAIVAKLGVP---FQVFIAIG 257 (526)
T ss_pred HHHHHHHcCCc---eEEEEeCC
Confidence 67889998885 77777754
No 280
>PRK08238 hypothetical protein; Validated
Probab=90.78 E-value=0.54 Score=56.56 Aligned_cols=48 Identities=21% Similarity=0.268 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcCCce
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSSGGE 853 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~nGa~ 853 (1067)
+...+.+++++++| + .++|+|+.+...+..+++.+|+ ||.+||+++..
T Consensus 75 pga~e~L~~lk~~G----~-~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~ 122 (479)
T PRK08238 75 EEVLDYLRAERAAG----R-KLVLATASDERLAQAVAAHLGL----FDGVFASDGTT 122 (479)
T ss_pred hhHHHHHHHHHHCC----C-EEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCcc
Confidence 67889999999987 6 7999999999999999999886 78899987653
No 281
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=90.76 E-value=0.18 Score=53.61 Aligned_cols=51 Identities=14% Similarity=0.197 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhccc
Q 001492 966 LASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 966 gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~ 1027 (1067)
.-.|...++.+. ..|. ++++ +||+.| | ++|++.+|.+|+|.--. -++.+|+
T Consensus 130 ~~~K~~~l~~l~-~~~~---~~v~-vGDs~n-D-l~ml~~Ag~~ia~~ak~----~~~~~~~ 180 (203)
T TIGR02137 130 KDPKRQSVIAFK-SLYY---RVIA-AGDSYN-D-TTMLSEAHAGILFHAPE----NVIREFP 180 (203)
T ss_pred cchHHHHHHHHH-hhCC---CEEE-EeCCHH-H-HHHHHhCCCCEEecCCH----HHHHhCC
Confidence 457999999884 5564 5888 999999 9 99999999999996433 3445554
No 282
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=90.67 E-value=3 Score=46.15 Aligned_cols=51 Identities=24% Similarity=0.358 Sum_probs=37.0
Q ss_pred HHHHHHHHhCCCcccEEEEecCCCCCChhhhhc-CCc-eEEEeCCCcccchhhhhc
Q 001492 972 ALRYLFVRWRLNVANMFVILGESGDTDYEELIS-GAH-KTLIMKGVVEKGSEELLR 1025 (1067)
Q Consensus 972 AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~-~ag-~gVaMgNA~e~~~~~~~~ 1025 (1067)
-..+|.++++|+++.++. |||..||| + ||. .+| .++.|--++...++.+..
T Consensus 229 m~~~l~~~~~i~psRt~m-vGDRL~TD-I-lFG~~~G~~TLLvltGv~~led~~~~ 281 (306)
T KOG2882|consen 229 MFEYLLEKFNIDPSRTCM-VGDRLDTD-I-LFGKNCGFKTLLVLSGVTTLEDILEA 281 (306)
T ss_pred HHHHHHHHcCCCcceEEE-Ecccchhh-h-hHhhccCcceEEEecCcCcHHHHHhc
Confidence 456789999999999999 99999999 4 454 445 366776666555544433
No 283
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=90.33 E-value=0.59 Score=47.01 Aligned_cols=37 Identities=11% Similarity=-0.048 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 796 IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 796 ~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
-+.+.+.|+.|+ ++ + .++|+|.-+...+..+++.+++
T Consensus 47 ~pG~~e~L~~L~-~~----~-~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 47 RPGVDEFLKRAS-EL----F-ELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred CCCHHHHHHHHH-hc----c-EEEEEeCCcHHHHHHHHHHhCc
Confidence 356788999997 43 7 8999999999999999998776
No 284
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=90.20 E-value=1.8 Score=57.62 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=36.9
Q ss_pred hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 793 KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 793 ~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.++-+.+.++|+.|++.| | ++.+.||=...++..+..++++
T Consensus 630 D~lq~~v~etI~~L~~AG----I-kv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAG----I-KIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhhccHHHHHHHHHCC----C-eEEEEcCCcHHHHHHHHHHhCC
Confidence 345678889999999998 9 9999999999999999999887
No 285
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=90.08 E-value=1.8 Score=53.78 Aligned_cols=85 Identities=14% Similarity=0.127 Sum_probs=51.9
Q ss_pred HHHHHHHHhcCCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCC
Q 001492 936 DDLRQKLRMRGLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGV 1015 (1067)
Q Consensus 936 ~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA 1015 (1067)
+++.+.|..+. ..-+.+.++...+=|+- + |++.| ++|+..||+-| | -+-|+.+++|||||=|
T Consensus 672 ~qld~il~nh~-eIVFARTSPqQKLiIVe-~----------cQr~G----aiVaVTGDGVN-D-sPALKKADIGVAMGia 733 (1019)
T KOG0203|consen 672 EQLDELLQNHQ-EIVFARTSPQQKLIIVE-G----------CQRQG----AIVAVTGDGVN-D-SPALKKADIGVAMGIA 733 (1019)
T ss_pred HHHHHHHHhCC-ceEEEecCccceEEeEh-h----------hhhcC----cEEEEeCCCcC-C-Chhhcccccceeeccc
Confidence 45666665543 23334444443444432 1 44444 47777999999 9 9999999999999988
Q ss_pred cccchhhhhcccCcCCCCCCCCCCCceeec
Q 001492 1016 VEKGSEELLRTTNLRDDIVPSESPLIAHVN 1045 (1067)
Q Consensus 1016 ~e~~~~~~~~a~~~~~d~~~~~~~~~~~vt 1045 (1067)
. +++-..|. |.+=.|..-+..||
T Consensus 734 G---SDvsKqAA----DmILLDDNFASIVt 756 (1019)
T KOG0203|consen 734 G---SDVSKQAA----DMILLDDNFASIVT 756 (1019)
T ss_pred c---chHHHhhc----ceEEecCcchhhee
Confidence 7 33333333 34444444444453
No 286
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=89.86 E-value=1.9 Score=47.77 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
+...+.+.++++|++++++++ |||+.+ | +..=+.+|..++.
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~-IgDs~~-D-i~aA~~aG~~~i~ 207 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIV-FGNSNS-S-VEAAHDGCMKCVA 207 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 457889999999999999999 999999 9 9998888875543
No 287
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=89.45 E-value=1.6 Score=54.84 Aligned_cols=73 Identities=15% Similarity=0.277 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEeeCC---------------eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCC
Q 001492 934 RIDDLRQKLRMRGLRCHPMYCRNS---------------TRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTD 998 (1067)
Q Consensus 934 ~~~el~~~L~~~~~~~~v~~s~~~---------------~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D 998 (1067)
...+..+.|+..+.+. ++.++++ .+-|++|. .|...++.|.++. +.++++||+-| |
T Consensus 541 ~a~~aI~~L~~~Gi~~-~mLTGDn~~~A~~iA~~lGId~v~AellPe--dK~~~V~~l~~~g-----~~VamVGDGIN-D 611 (713)
T COG2217 541 DAKEAIAALKALGIKV-VMLTGDNRRTAEAIAKELGIDEVRAELLPE--DKAEIVRELQAEG-----RKVAMVGDGIN-D 611 (713)
T ss_pred hHHHHHHHHHHCCCeE-EEEcCCCHHHHHHHHHHcChHhheccCCcH--HHHHHHHHHHhcC-----CEEEEEeCCch-h
Confidence 3456667788888773 4444433 25677785 6999999998543 46777999999 9
Q ss_pred hhhhhcCCceEEEeCCCc
Q 001492 999 YEELISGAHKTLIMKGVV 1016 (1067)
Q Consensus 999 ~~eML~~ag~gVaMgNA~ 1016 (1067)
-+-|..+..|||||.+.
T Consensus 612 -APALA~AdVGiAmG~Gt 628 (713)
T COG2217 612 -APALAAADVGIAMGSGT 628 (713)
T ss_pred -HHHHhhcCeeEeecCCc
Confidence 99999999999999977
No 288
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=89.16 E-value=0.98 Score=51.34 Aligned_cols=217 Identities=12% Similarity=0.175 Sum_probs=107.7
Q ss_pred eEEEEEEeCCCCCCCCchhh--H-HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHH----------Hhc-CCCCC
Q 001492 776 RLIVIALDCYDSKGAPDKKM--I-QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFL----------NSM-KIEAN 841 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~~i--~-~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l----------~~l-~i~~~ 841 (1067)
++-++-+|.|+||-.+.+.+ + +-+..+|+ |-++| + .|.|+|.=.|.++.++- ++. .++..
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~-LL~~g----v-~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~ 219 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIK-LLRRG----V-KVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPE 219 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHH-HHhcC----C-eEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHH
Confidence 55577779999987654444 2 33444444 44555 7 78888877666655443 332 33321
Q ss_pred CCCEEEEcCCce--EE-ecCCCcccCCcCCCChhhhhccccccccchhHHHHHhhhhcccC----CCCCCCCCCCccccc
Q 001492 842 EFDALICSSGGE--MY-YPGTYTEEGGKLFPDPDYASHIDYRWGCDGLKKTIWKLMNTTEG----GENSKNSSSPIQEDQ 914 (1067)
Q Consensus 842 ~~d~~I~~nGa~--I~-~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~l~~~l~~~~~~~~~----~~~~~~~~~~~~~~~ 914 (1067)
.-..++-..|-. ++ +.... .....++.+..|...-...|..+.+...+..-...... .+. ...++..
T Consensus 220 qk~~l~VMGGEsNYLfr~~~~~-~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~L----pa~IiRK- 293 (408)
T PF06437_consen 220 QKSNLYVMGGESNYLFRYDPES-PHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNL----PATIIRK- 293 (408)
T ss_pred HhcCEEEecccceeEEEecCCC-CCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCC----CeeEEee-
Confidence 111233333332 11 22110 11124567778887777889887777665433222111 000 0000000
Q ss_pred ccCCceEEEEEecCCC--chHHHH----HHHHHHHhcCCcEEEEEe--eCC--eeEEEecCCCCHHHHHHHHHHHh----
Q 001492 915 KSSNAHCISYLIKDPS--KARRID----DLRQKLRMRGLRCHPMYC--RNS--TRMQIVPLLASRSQALRYLFVRW---- 980 (1067)
Q Consensus 915 ~~~~~~ki~~~~~~~~--~~~~~~----el~~~L~~~~~~~~v~~s--~~~--~~lEI~p~gasKg~AL~~L~~~~---- 980 (1067)
...+-..-.... .-..++ .+++.|........+-+| .++ -++|| .+|.-|++.|.+++
T Consensus 294 ----~RAVGivP~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~~~~~ 365 (408)
T PF06437_consen 294 ----ERAVGIVPKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYFDPEG 365 (408)
T ss_pred ----cceeeEecCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHHHhcc
Confidence 001111101111 011122 233444432222222222 222 25666 58999999999999
Q ss_pred CCCcccEEEEecCC----C-CCChhhhhcCCceEEEeCCCc
Q 001492 981 RLNVANMFVILGES----G-DTDYEELISGAHKTLIMKGVV 1016 (1067)
Q Consensus 981 gi~~e~vva~fGDs----~-N~D~~eML~~ag~gVaMgNA~ 1016 (1067)
+|.+++++= +||. | | |+-. +.++..+-+.|=.
T Consensus 366 ~i~~~~tLH-VGDQF~s~GaN-Dfka--R~a~~t~WIasP~ 402 (408)
T PF06437_consen 366 GIKPSETLH-VGDQFLSAGAN-DFKA--RLACTTAWIASPQ 402 (408)
T ss_pred CCCccceee-ehhhhhccCCc-chhh--hhhceeeEecCHH
Confidence 999999999 9995 3 7 7211 2355566665543
No 289
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=88.81 E-value=1.1 Score=46.57 Aligned_cols=35 Identities=23% Similarity=0.193 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE
Q 001492 973 LRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL 1010 (1067)
Q Consensus 973 L~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV 1010 (1067)
+.++++++|++++++++ |||+.+ | +.+-+.+|..+
T Consensus 109 ~~~~~~~l~~~~~~~~~-VgDs~~-D-i~~A~~aG~~~ 143 (181)
T PRK08942 109 LLSIAERLNIDLAGSPM-VGDSLR-D-LQAAAAAGVTP 143 (181)
T ss_pred HHHHHHHcCCChhhEEE-EeCCHH-H-HHHHHHCCCeE
Confidence 33445556788888888 999988 8 88888887643
No 290
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=88.53 E-value=0.69 Score=52.92 Aligned_cols=64 Identities=13% Similarity=0.069 Sum_probs=44.2
Q ss_pred EEEEeCCCCCCCCchhhHHHHHHHHHHHHhc----CCCCceeEEEEE---CCCCHHHHHHHH-HhcCCCCCCCCEEEEc
Q 001492 779 VIALDCYDSKGAPDKKMIQIMYDVFKAVRLD----HQTARVTGFALS---TAMPVSETIEFL-NSMKIEANEFDALICS 849 (1067)
Q Consensus 779 lia~DiDGTLl~~~~~i~~~~~~al~~l~~~----g~~g~i~~~vIa---TGR~~~~~~~~l-~~l~i~~~~~d~~I~~ 849 (1067)
.|.+||||||.+.+ .+.+...++++.|+.. | + .+++. +|++.......+ +.+|++. .++-++++
T Consensus 2 ~~ifD~DGvL~~g~-~~i~ga~eal~~L~~~~~~~g----~-~~~flTNn~g~s~~~~~~~l~~~lG~~~-~~~~i~~s 73 (321)
T TIGR01456 2 GFAFDIDGVLFRGK-KPIAGASDALRRLNRNQGQLK----I-PYIFLTNGGGFSERARAEEISSLLGVDV-SPLQVIQS 73 (321)
T ss_pred EEEEeCcCceECCc-cccHHHHHHHHHHhccccccC----C-CEEEEecCCCCCHHHHHHHHHHHcCCCC-CHHHHHhh
Confidence 45569999988764 4578889999999986 6 4 34443 578888866655 8888864 23334443
No 291
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=88.49 E-value=21 Score=41.33 Aligned_cols=80 Identities=14% Similarity=0.064 Sum_probs=50.2
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhc
Q 001492 492 KKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAK 571 (1067)
Q Consensus 492 ~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~ 571 (1067)
.+.++.+++++.++.+ .. +.+++...+.. +.+.....+. ..+.+.+ +..++|+.|
T Consensus 182 ~~llP~~~~aa~~L~~--~~--~~~~i~~a~~~-----------~~i~~~~~~~---~~~~~~~-----~~~~~m~~a-- 236 (347)
T PRK14089 182 KRLMPIFKELAKKLEG--KE--KILVVPSFFKG-----------KDLKEIYGDI---SEFEISY-----DTHKALLEA-- 236 (347)
T ss_pred HHHHHHHHHHHHHHhh--cC--cEEEEeCCCcH-----------HHHHHHHhcC---CCcEEec-----cHHHHHHhh--
Confidence 4667778899988853 22 44444333321 2233333322 1333332 567899999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 001492 572 TKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 572 ~~dV~v~ps~~EgfgltllEAmA~G~PVVat~ 603 (1067)
|+.+..| |.+.+|++.+|+|.|..-
T Consensus 237 --Dlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 237 --EFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred --hHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 9988764 888889999999999854
No 292
>PLN02207 UDP-glycosyltransferase
Probab=88.11 E-value=69 Score=38.70 Aligned_cols=134 Identities=12% Similarity=0.173 Sum_probs=74.5
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-hhhhhccchHHHHHHHHHHHhcCCCCcEEeCC
Q 001492 479 HKPMILALSRPD--PKKNITTLLKAFGECRPLRELANLTLIMGNRDD-IEEMSSGNASVLITVLKLIDKYDLYGQVAYPK 555 (1067)
Q Consensus 479 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~-~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g 555 (1067)
+..+.++.|... +.+-+..++.+++.+. . .+..++.+... ..+ .+. ....++. .+++.+.+
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~~----~-~flW~~r~~~~~~~~-------~lp--~~f~er~--~~~g~i~~ 338 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELCQ----Y-RFLWSLRTEEVTNDD-------LLP--EGFLDRV--SGRGMICG 338 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHCC----C-cEEEEEeCCCccccc-------cCC--HHHHhhc--CCCeEEEE
Confidence 455677778654 3345677777777662 1 34345553210 000 000 0111122 24556668
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCc----hh-hhccCCceEEeC---------
Q 001492 556 HHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGP----VD-IHRALNNGLLVD--------- 621 (1067)
Q Consensus 556 ~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~----~e-iv~~~~~Gllv~--------- 621 (1067)
+.|+.++ ++..+ .+.||.= -|+ .+++||+.+|+|+|+-...+= .. +++....|+-+.
T Consensus 339 W~PQ~~I---L~H~~--vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~ 409 (468)
T PLN02207 339 WSPQVEI---LAHKA--VGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDE 409 (468)
T ss_pred eCCHHHH---hcccc--cceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCC
Confidence 9887765 34431 1456632 233 478999999999999765432 22 233244565331
Q ss_pred CCCHHHHHHHHHHhhc
Q 001492 622 PHDQQAIADALLKLVS 637 (1067)
Q Consensus 622 p~d~~~la~aL~~ll~ 637 (1067)
.-+.++++++|.+++.
T Consensus 410 ~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 410 IVNANEIETAIRCVMN 425 (468)
T ss_pred cccHHHHHHHHHHHHh
Confidence 1267899999999996
No 293
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=87.88 E-value=0.91 Score=46.98 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=32.9
Q ss_pred cCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE
Q 001492 964 PLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL 1010 (1067)
Q Consensus 964 p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV 1010 (1067)
+.+..|+..++.+...+ ++++++ +||+.| | ++|.+.++.-.
T Consensus 145 ~~g~~K~~~~~~~~~~~---~~~~i~-iGD~~~-D-~~aa~~~d~~~ 185 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---YQHIIY-IGDGVT-D-VCPAKLSDVVF 185 (188)
T ss_pred CCCCCHHHHHHHHHhhc---CceEEE-ECCCcc-h-hchHhcCCccc
Confidence 46677999999988765 577877 999999 9 99988876543
No 294
>PLN02940 riboflavin kinase
Probab=87.77 E-value=0.61 Score=54.65 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceE-EEeCCC
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKT-LIMKGV 1015 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~g-VaMgNA 1015 (1067)
+...+...++++|++++++++ |||+.+ | ++.=+.+|.. |++...
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~-VGDs~~-D-i~aA~~aGi~~I~v~~g 196 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLV-IEDSLP-G-VMAGKAAGMEVIAVPSI 196 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEE-EeCCHH-H-HHHHHHcCCEEEEECCC
Confidence 567899999999999999999 999999 9 9998888854 455443
No 295
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=87.55 E-value=1.5 Score=50.24 Aligned_cols=66 Identities=12% Similarity=0.201 Sum_probs=48.4
Q ss_pred CeEEEEEEeCCCCCCCC---ch--------hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHh----cCCC
Q 001492 775 RRLIVIALDCYDSKGAP---DK--------KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNS----MKIE 839 (1067)
Q Consensus 775 ~klllia~DiDGTLl~~---~~--------~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~----l~i~ 839 (1067)
+|++++ |+|+||..- +. ...+.+.++|++|+++| + .++|||..+...+...|+. +++.
T Consensus 3 ~k~~v~--DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~G----i-~lai~S~n~~~~a~~~l~~~~~~~~~~ 75 (320)
T TIGR01686 3 LKVLVL--DLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQG----F-LLALASKNDEDDAKKVFERRKDFILQA 75 (320)
T ss_pred eEEEEE--cCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCC----C-EEEEEcCCCHHHHHHHHHhCccccCcH
Confidence 365555 999996432 11 23478999999999997 8 8999999999999999998 6663
Q ss_pred CCCCCEEEE
Q 001492 840 ANEFDALIC 848 (1067)
Q Consensus 840 ~~~~d~~I~ 848 (1067)
..|+.+++
T Consensus 76 -~~f~~~~~ 83 (320)
T TIGR01686 76 -EDFDARSI 83 (320)
T ss_pred -HHeeEEEE
Confidence 23444444
No 296
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=87.53 E-value=59 Score=37.55 Aligned_cols=104 Identities=12% Similarity=0.087 Sum_probs=58.3
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 479 HKPMILALSRPDPKKNIT--TLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 479 ~~~~Il~vgRld~~Kgi~--~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
...+++..|.-.+.|.++ ...+.+..+.+ ....+ +++|+..+.+ ......+.+.......+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~v-vl~ggp~e~e---------~~~~~~i~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEV-VLTSGPDKDD---------LACVNEIAQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeE-EEEcCCChHH---------HHHHHHHHHhcCCCccccccCC
Confidence 344566766655566544 55555555532 22223 3444432111 1111222232222234567888
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~ 603 (1067)
.+-.++.++++.| ++||-. ++ | .+-=|.|.|+|+|+=.
T Consensus 251 ~sL~el~ali~~a----~l~v~n---DS-G-p~HlAaA~g~P~v~lf 288 (352)
T PRK10422 251 TTFPELGALIDHA----QLFIGV---DS-A-PAHIAAAVNTPLICLF 288 (352)
T ss_pred CCHHHHHHHHHhC----CEEEec---CC-H-HHHHHHHcCCCEEEEE
Confidence 8889999999999 998855 22 2 3334678899999854
No 297
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=86.14 E-value=1.3 Score=51.11 Aligned_cols=64 Identities=17% Similarity=0.263 Sum_probs=45.5
Q ss_pred CeEEEEEEeCCCCCCCC-----------chhhHHHHHHHHHHHHhcCCCCceeEEEEECCC---------------CHHH
Q 001492 775 RRLIVIALDCYDSKGAP-----------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAM---------------PVSE 828 (1067)
Q Consensus 775 ~klllia~DiDGTLl~~-----------~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR---------------~~~~ 828 (1067)
++++|| |-||||... +..+-+.+.++|..|+++| + .++|+|.- +...
T Consensus 2 ~k~l~l--DrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G----~-kL~IvTNq~g~G~~~~~~~~l~~~~~~ 74 (354)
T PRK05446 2 QKILFI--DRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAG----Y-KLVMVTNQDGLGTDSFPQEDFDPPHNL 74 (354)
T ss_pred CcEEEE--eCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCC----C-eEEEEECCccccCccccHHHHhhHHHH
Confidence 477777 999995542 2345577899999999887 7 78999983 2445
Q ss_pred HHHHHHhcCCCCCCCCE-EEE
Q 001492 829 TIEFLNSMKIEANEFDA-LIC 848 (1067)
Q Consensus 829 ~~~~l~~l~i~~~~~d~-~I~ 848 (1067)
+..+++.+++. |+. ++|
T Consensus 75 i~~iL~~~gl~---fd~i~i~ 92 (354)
T PRK05446 75 MMQIFESQGIK---FDEVLIC 92 (354)
T ss_pred HHHHHHHcCCc---eeeEEEe
Confidence 66788888874 444 345
No 298
>PRK06769 hypothetical protein; Validated
Probab=86.09 E-value=1.2 Score=46.05 Aligned_cols=43 Identities=16% Similarity=0.243 Sum_probs=32.1
Q ss_pred eEEEEEEeCCCCCCCC-------chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCC
Q 001492 776 RLIVIALDCYDSKGAP-------DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP 825 (1067)
Q Consensus 776 klllia~DiDGTLl~~-------~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~ 825 (1067)
|++|| |.||||... .-.+-+..+++|++|+++| + .++|+|+-+
T Consensus 5 ~~~~~--d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G----~-~l~I~Tn~~ 54 (173)
T PRK06769 5 QAIFI--DRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANH----I-KIFSFTNQP 54 (173)
T ss_pred cEEEE--eCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCC----C-EEEEEECCc
Confidence 56666 999996322 1124578899999999987 7 789999865
No 299
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=85.60 E-value=75 Score=36.55 Aligned_cols=118 Identities=18% Similarity=0.311 Sum_probs=83.8
Q ss_pred HHHHHhcCC--CCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCc
Q 001492 539 LKLIDKYDL--YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNN 616 (1067)
Q Consensus 539 ~~l~~~~~l--~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~ 616 (1067)
...+..+++ .++..|-|.+ +++.+++.-. |++|.--+--+.+..-.|++.-|=|.|-.. .+++ +.
T Consensus 241 ~~f~~~ldlvr~gkasfegR~---~~p~fla~~t---D~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~--d~ 307 (364)
T PF10933_consen 241 VNFANSLDLVRDGKASFEGRF---DFPDFLAQHT---DAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK--DV 307 (364)
T ss_pred HHHHHhhHHhhcCeeEEeeec---ChHHHHHhCC---CEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--cc
Confidence 344455544 4677787775 6777777653 887766666688999999999999999743 2333 26
Q ss_pred eEEeCCCCHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHcCCH--HHHHHHHHHHH
Q 001492 617 GLLVDPHDQQAIADALLKLVS-EKNLWVECRKNGWKNIHLFSW--PEHCRTYLTRV 669 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll~-d~~~~~~~~~~~~~~~~~fsw--~~~a~~~l~~~ 669 (1067)
|+..+-.|..+=+++|.+++. ....+...++.+++.+..++. +..++.|.+.+
T Consensus 308 GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 308 GYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSPENPANVRAYEARL 363 (364)
T ss_pred CcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Confidence 999999999999999999988 344567788888877754443 44455555543
No 300
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=85.08 E-value=3.2 Score=45.62 Aligned_cols=66 Identities=21% Similarity=0.298 Sum_probs=48.4
Q ss_pred EEEEeCCCCCCCCch--hh-HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcC
Q 001492 779 VIALDCYDSKGAPDK--KM-IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 779 lia~DiDGTLl~~~~--~i-~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+|++|+|.||.+++. +| .+.+.+.+.+|++.| -+ .+.-++|- ..-+..-+++++++ .-||++||.+
T Consensus 124 VIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g---~v-LvLWSyG~-~eHV~~sl~~~~L~-~~Fd~ii~~G 192 (297)
T PF05152_consen 124 VIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQG---CV-LVLWSYGN-REHVRHSLKELKLE-GYFDIIICGG 192 (297)
T ss_pred EEEEECCCcccccCCccccCChHHHHHHHHHHHcC---CE-EEEecCCC-HHHHHHHHHHhCCc-cccEEEEeCC
Confidence 444599999776533 33 478899999999996 36 46666665 56677888888886 4599999864
No 301
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=84.88 E-value=2.3 Score=46.80 Aligned_cols=39 Identities=5% Similarity=-0.087 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEEEECCCCH---HHHHHHHHhcCCC
Q 001492 796 IQIMYDVFKAVRLDHQTARVTGFALSTAMPV---SETIEFLNSMKIE 839 (1067)
Q Consensus 796 ~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~---~~~~~~l~~l~i~ 839 (1067)
.+.+.+..+.++++| + .|++.|||+- ......|...|++
T Consensus 147 lp~al~ly~~l~~~G----~-kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 147 LPETLKNYNKLVSLG----F-KIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred ChHHHHHHHHHHHCC----C-EEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 467788899999998 7 8999999974 3356678887874
No 302
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=84.81 E-value=1.3 Score=43.45 Aligned_cols=118 Identities=23% Similarity=0.175 Sum_probs=60.6
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCcCCCcccccCCCCCCCCccccccCCeEEEeccCC-CCccCcc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFG-PRDKYLR 268 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~-~~~~~l~ 268 (1067)
++|...=.+-|+++|.++| |+|.+.|... +.+ .-+..|+.++.++.. +.....
T Consensus 8 t~Ghv~P~lala~~L~~rG--h~V~~~~~~~--------~~~---------------~v~~~Gl~~~~~~~~~~~~~~~- 61 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRG--HEVRLATPPD--------FRE---------------RVEAAGLEFVPIPGDSRLPRSL- 61 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT---EEEEEETGG--------GHH---------------HHHHTT-EEEESSSCGGGGHHH-
T ss_pred ChhHHHHHHHHHHHHhccC--CeEEEeeccc--------cee---------------cccccCceEEEecCCcCcCccc-
Confidence 7799998999999999999 9999998732 111 112458888887764 110000
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhc-----CCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCC
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIG-----GGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSL 338 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~-----~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l 338 (1067)
.....+..+.. ....+.++.+.+.++.. -+....+|++.++. ....+..++.++++|.+.+....
T Consensus 62 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 62 --EPLANLRRLAR-LIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp --HHHHHHHCHHH-HHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESSG
T ss_pred --chhhhhhhHHH-HhhhhhHHHHHhhccCcchhhhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhCC
Confidence 00011111111 11112222222222110 11112345554332 35566778888999999887754
No 303
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=84.81 E-value=1.6 Score=46.60 Aligned_cols=37 Identities=5% Similarity=-0.059 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 798 IMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 798 ~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+.++|+.|+++| + .++|+||-....+..+++.+++.
T Consensus 89 g~~~~l~~l~~~g----~-~~~IvS~~~~~~~~~~l~~~~i~ 125 (219)
T TIGR00338 89 GAEELVKTLKEKG----Y-KVAVISGGFDLFAEHVKDKLGLD 125 (219)
T ss_pred CHHHHHHHHHHCC----C-EEEEECCCcHHHHHHHHHHcCCC
Confidence 3455666666665 5 67888887777777777777763
No 304
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=84.78 E-value=1.8 Score=37.95 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCc-eEEEeCCCcccch
Q 001492 971 QALRYLFVRWRLNVANMFVILGESGDTDYEELISGAH-KTLIMKGVVEKGS 1020 (1067)
Q Consensus 971 ~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag-~gVaMgNA~e~~~ 1020 (1067)
..+...+++++++++++++ +||+..|| +.+=+.+| .+|.+..+....+
T Consensus 8 ~~~~~a~~~~~~~~~~~~~-VGD~~~~D-i~~a~~~G~~~ilV~tG~~~~~ 56 (75)
T PF13242_consen 8 GMLEQALKRLGVDPSRCVM-VGDSLETD-IEAAKAAGIDTILVLTGVYSPE 56 (75)
T ss_dssp HHHHHHHHHHTSGGGGEEE-EESSTTTH-HHHHHHTTSEEEEESSSSSCCC
T ss_pred HHHHHHHHHcCCCHHHEEE-EcCCcHhH-HHHHHHcCCcEEEECCCCCCHH
Confidence 4577888999999999999 99994449 99988888 4677777664433
No 305
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=84.63 E-value=8.2 Score=46.50 Aligned_cols=181 Identities=14% Similarity=0.131 Sum_probs=123.0
Q ss_pred ccCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCC-cEEe
Q 001492 475 LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYG-QVAY 553 (1067)
Q Consensus 475 ~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~-~V~~ 553 (1067)
..+.+..++..+..+- |=-+..++.+..+ |...|+-.|++=.-|..- -.++...+..+|+.+ +|.|
T Consensus 754 ~Lp~d~vvf~~FNqLy--KidP~~l~~W~~I--Lk~VPnS~LwllrfPa~g---------e~rf~ty~~~~Gl~p~riif 820 (966)
T KOG4626|consen 754 GLPEDAVVFCNFNQLY--KIDPSTLQMWANI--LKRVPNSVLWLLRFPAVG---------EQRFRTYAEQLGLEPDRIIF 820 (966)
T ss_pred CCCCCeEEEeechhhh--cCCHHHHHHHHHH--HHhCCcceeEEEeccccc---------hHHHHHHHHHhCCCccceee
Confidence 3445555555555442 3335666777666 355566444332222111 156778888888865 6778
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC-------CCCchhhhccCCceEEeCCCCHH
Q 001492 554 PKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK-------NGGPVDIHRALNNGLLVDPHDQQ 626 (1067)
Q Consensus 554 ~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~-------~Gg~~eiv~~~~~Gllv~p~d~~ 626 (1067)
..-...+|=..-+..| ||++-+++.-|- .|-.|.+.+|+|+|.-. +++ .++...+.|-+|- .+.+
T Consensus 821 s~va~k~eHvrr~~La----Dv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~--Sll~~~Gl~hlia-k~~e 892 (966)
T KOG4626|consen 821 SPVAAKEEHVRRGQLA----DVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAA--SLLTALGLGHLIA-KNRE 892 (966)
T ss_pred ccccchHHHHHhhhhh----hhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHH--HHHHHcccHHHHh-hhHH
Confidence 7776777878889999 999988877553 46678899999999643 222 1222334455553 4788
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHH--H-cCCHHHHHHHHHHHHHHhHhcC
Q 001492 627 AIADALLKLVSEKNLWVECRKNGWKNI--H-LFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 627 ~la~aL~~ll~d~~~~~~~~~~~~~~~--~-~fsw~~~a~~~l~~~~~~~~~~ 676 (1067)
+..+.-.+|-.|.+..+.++..-+... . .|+-.+++..+++.|.+.=.+.
T Consensus 893 EY~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~y 945 (966)
T KOG4626|consen 893 EYVQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKKY 945 (966)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHHh
Confidence 888888888899999999998888765 2 8999999999999998765544
No 306
>PLN03004 UDP-glycosyltransferase
Probab=83.36 E-value=2.9 Score=50.02 Aligned_cols=143 Identities=12% Similarity=0.158 Sum_probs=80.8
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 479 HKPMILALSRPD--PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 479 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
+.-+++++|... +.+-+..+..+++.+. . .+..++......+.-.......+. ....++.. ...+.+.++
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~~~~~~~~~~lp--~gf~er~~-~~g~~v~~W 341 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELEKTELDLKSLLP--EGFLSRTE-DKGMVVKSW 341 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCccccccccchhhhCC--hHHHHhcc-CCcEEEEee
Confidence 456777888874 3456667777777652 2 233355421100000000000000 01111111 235777889
Q ss_pred CCCCCHHHHHHHhhcCCcE--EEecCCCCCCCHHHHHHHHcCCCEEEcCCCC----chhhh-ccCCceEEeCC-----CC
Q 001492 557 HKQYDVPEIYRLAAKTKGV--FINPALVEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RALNNGLLVDP-----HD 624 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV--~v~ps~~EgfgltllEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~p-----~d 624 (1067)
.|+.+ +++.+ +| ||. -+--++++||+++|+|+|+-...+ ....+ .....|+.++. -+
T Consensus 342 ~PQ~~---iL~H~----~v~~FvT----H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~ 410 (451)
T PLN03004 342 APQVP---VLNHK----AVGGFVT----HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVS 410 (451)
T ss_pred CCHHH---HhCCC----ccceEec----cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccC
Confidence 88775 56666 55 552 123358999999999999976433 23333 33467877752 27
Q ss_pred HHHHHHHHHHhhcCHH
Q 001492 625 QQAIADALLKLVSEKN 640 (1067)
Q Consensus 625 ~~~la~aL~~ll~d~~ 640 (1067)
.++++++|.++++++.
T Consensus 411 ~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 411 STEVEKRVQEIIGECP 426 (451)
T ss_pred HHHHHHHHHHHhcCHH
Confidence 7999999999998754
No 307
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=82.93 E-value=1.7 Score=46.82 Aligned_cols=38 Identities=8% Similarity=0.211 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+.+.++|..|+++| + .++++|+.+...+...+..+|+.
T Consensus 89 pGv~~~l~~L~~~~----i-~~avaS~s~~~~~~~~L~~~gl~ 126 (221)
T COG0637 89 PGVVELLEQLKARG----I-PLAVASSSPRRAAERVLARLGLL 126 (221)
T ss_pred ccHHHHHHHHHhcC----C-cEEEecCChHHHHHHHHHHccCh
Confidence 34556666666664 5 67777777766777777666653
No 308
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=82.92 E-value=3.1 Score=42.72 Aligned_cols=59 Identities=5% Similarity=0.124 Sum_probs=44.1
Q ss_pred eEEEEEEeCCCCCCCC-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCC-------CHHHHHHHHHhcCCC
Q 001492 776 RLIVIALDCYDSKGAP-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAM-------PVSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~DiDGTLl~~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR-------~~~~~~~~l~~l~i~ 839 (1067)
|.+++ |.|.||..+ +.+++++..+.++++++.+ +.- .|+|.|=- ....+..+-+.+|++
T Consensus 42 k~li~--DkDNTL~~~~~~~i~~~~~~~~~~l~~~~--~~~-~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 42 KALIF--DKDNTLTPPYEDEIPPEYAEWLNELKKQF--GKD-RVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred eEEEE--cCCCCCCCCCcCcCCHHHHHHHHHHHHHC--CCC-eEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 55555 999998766 5679999999999999987 432 25555544 367788888888885
No 309
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=82.36 E-value=5.1 Score=48.23 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
.|...+...+++++ ++++++ |||+.+ | +.+-+.+|..++
T Consensus 386 ~kP~~~~~al~~l~--~~~~v~-VGDs~~-D-i~aAk~AG~~~I 424 (459)
T PRK06698 386 NKSDLVKSILNKYD--IKEAAV-VGDRLS-D-INAAKDNGLIAI 424 (459)
T ss_pred CCcHHHHHHHHhcC--cceEEE-EeCCHH-H-HHHHHHCCCeEE
Confidence 46677888888765 578888 999999 9 999999997443
No 310
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=82.20 E-value=1.2 Score=47.62 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCce-EEEeCCCc
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK-TLIMKGVV 1016 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~-gVaMgNA~ 1016 (1067)
+..+++.++++++++++++++ |||+.+ | ++|.+.+|. +|.+..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~-igD~~~-D-i~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLF-VGDSRN-D-IQAARAAGCPSVGVTYGY 196 (226)
T ss_pred ChHHHHHHHHHcCCChhheEE-ECCCHH-H-HHHHHHCCCcEEEECcCC
Confidence 578999999999999999999 999999 9 999999997 66666544
No 311
>PLN02954 phosphoserine phosphatase
Probab=81.64 E-value=2.9 Score=44.86 Aligned_cols=43 Identities=14% Similarity=0.234 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 965 LLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 965 ~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
.+.+|..+++.+++++|+ +++++ |||+.| | +.|.+.++..++.
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~-iGDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVM-IGDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEE-EeCCHH-H-HHhhhcCCCCEEE
Confidence 345699999999999886 57888 999999 9 9998775555433
No 312
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=81.21 E-value=4.6 Score=40.98 Aligned_cols=57 Identities=4% Similarity=0.042 Sum_probs=48.4
Q ss_pred eEEEEEEeCCCCCCC-CchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 776 RLIVIALDCYDSKGA-PDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~DiDGTLl~-~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
|-+++ |+|.||.. .+...+++.++-+..+++.| + +++|.|-.+..-+..+...++++
T Consensus 29 kgvi~--DlDNTLv~wd~~~~tpe~~~W~~e~k~~g----i-~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 29 KGVIL--DLDNTLVPWDNPDATPELRAWLAELKEAG----I-KVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred cEEEE--eccCceecccCCCCCHHHHHHHHHHHhcC----C-EEEEEeCCCHHHHHhhhhhcCCc
Confidence 55555 99999654 34568899999999999998 8 89999999999999999998885
No 313
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=80.08 E-value=16 Score=38.37 Aligned_cols=72 Identities=10% Similarity=0.108 Sum_probs=31.8
Q ss_pred CceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCCEEEeCC
Q 001492 305 WPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITST 384 (1067)
Q Consensus 305 ~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad~Vi~~S 384 (1067)
+||++.......-......++..|+|+++.---+....+ ..|+..+.+ -+.+++..|.|++.|
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~---------------~~~~~~~~~--~r~~l~~f~~i~aqs 157 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERSF---------------RRYRRFPFL--FRPLLSRFDRILAQS 157 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-----------------------------HH--HHHHGGG-SEEEESS
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccccc---------------hhhhhhHHH--HHHHHHhCCEEEECC
Confidence 499888776544444445666779998764433211111 111111211 244588999999999
Q ss_pred HHHHHHHHh
Q 001492 385 KQEIDEQWG 393 (1067)
Q Consensus 385 ~~~~~~~~~ 393 (1067)
+...+.+..
T Consensus 158 ~~da~r~~~ 166 (186)
T PF04413_consen 158 EADAERFRK 166 (186)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 998887744
No 314
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=79.35 E-value=1.1 Score=48.60 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHH---HHHHHHHhcCCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVS---ETIEFLNSMKIE 839 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~---~~~~~l~~l~i~ 839 (1067)
+...++++.++++| + .|+++|||+-. .....|...|++
T Consensus 118 p~a~~l~~~~~~~G----~-~V~~iT~R~~~~r~~T~~nL~~~G~~ 158 (229)
T PF03767_consen 118 PGALELYNYARSRG----V-KVFFITGRPESQREATEKNLKKAGFP 158 (229)
T ss_dssp TTHHHHHHHHHHTT----E-EEEEEEEEETTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHCC----C-eEEEEecCCchhHHHHHHHHHHcCCC
Confidence 44779999999998 8 89999999655 445667776763
No 315
>PRK11590 hypothetical protein; Provisional
Probab=78.96 E-value=1.9 Score=46.01 Aligned_cols=47 Identities=11% Similarity=-0.017 Sum_probs=36.7
Q ss_pred EecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCC
Q 001492 962 IVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014 (1067)
Q Consensus 962 I~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgN 1014 (1067)
....|..|...|+.++ |.+.+..++ .|||.| | ++||+.+++++++.-
T Consensus 157 ~~c~g~~K~~~l~~~~---~~~~~~~~a-Y~Ds~~-D-~pmL~~a~~~~~vnp 203 (211)
T PRK11590 157 LRCLGHEKVAQLERKI---GTPLRLYSG-YSDSKQ-D-NPLLYFCQHRWRVTP 203 (211)
T ss_pred ccCCChHHHHHHHHHh---CCCcceEEE-ecCCcc-c-HHHHHhCCCCEEECc
Confidence 3455666776666554 567777778 999999 9 999999999998854
No 316
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=78.83 E-value=5.2 Score=47.80 Aligned_cols=30 Identities=23% Similarity=0.244 Sum_probs=27.3
Q ss_pred CChHHHHHHHHHHHHHc---------CCCeeEEEEEecCCC
Q 001492 190 TGGQIKYVVELARALAR---------MPGVYRVDLFSRQVS 221 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~---------~G~v~~V~v~t~~~~ 221 (1067)
.||.++-+++.+-.|.. +| |+|.++|.+..
T Consensus 46 ~gg~er~~v~~~~~l~s~~~~lg~~d~G--~qV~~l~~h~~ 84 (495)
T KOG0853|consen 46 IGGAERLVVDAAVHLLSGQDVLGLPDTG--GQVVYLTSHED 84 (495)
T ss_pred cCchHHHhHHHHHHHHhcccccCCCCCC--ceEEEEehhhh
Confidence 78999999999999999 99 99999998753
No 317
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=78.13 E-value=5.3 Score=36.99 Aligned_cols=81 Identities=17% Similarity=0.221 Sum_probs=55.3
Q ss_pred EEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEe--CCCCCCCC--HHHHHHHhhcCCcEEEecCCCC---CCCHH
Q 001492 516 LIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAY--PKHHKQYD--VPEIYRLAAKTKGVFINPALVE---PFGLT 588 (1067)
Q Consensus 516 lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~--~g~~~~~d--l~~ly~~A~~~~dV~v~ps~~E---gfglt 588 (1067)
+|||+.++ ....+...++++|..- +.+ .+...... ++.....| |++|++.-+= .+-.+
T Consensus 3 liVGG~~~----------~~~~~~~~~~~~G~~~-~~hg~~~~~~~~~~~l~~~i~~a----D~VIv~t~~vsH~~~~~v 67 (97)
T PF10087_consen 3 LIVGGRED----------RERRYKRILEKYGGKL-IHHGRDGGDEKKASRLPSKIKKA----DLVIVFTDYVSHNAMWKV 67 (97)
T ss_pred EEEcCCcc----------cHHHHHHHHHHcCCEE-EEEecCCCCccchhHHHHhcCCC----CEEEEEeCCcChHHHHHH
Confidence 57787543 2466778888888643 333 24444445 88899999 9998886543 34445
Q ss_pred HHHHHHcCCCEEEcCCCCchhhh
Q 001492 589 LIEAAAHGLPMVATKNGGPVDIH 611 (1067)
Q Consensus 589 llEAmA~G~PVVat~~Gg~~eiv 611 (1067)
--+|-..|+|++-++..|...+.
T Consensus 68 k~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 68 KKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHcCCcEEEECCCCHHHHH
Confidence 56777789999999977766554
No 318
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=78.04 E-value=1.3 Score=46.69 Aligned_cols=34 Identities=9% Similarity=0.226 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCc
Q 001492 971 QALRYLFVRWRLNVANMFVILGESGDTDYEELISGAH 1007 (1067)
Q Consensus 971 ~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag 1007 (1067)
..+..+++.++++++++++ +||+.| | ..|++.||
T Consensus 182 k~~~~~i~~l~~~~~~v~~-vGDg~n-D-~~al~~Ag 215 (215)
T PF00702_consen 182 KIFLRIIKELQVKPGEVAM-VGDGVN-D-APALKAAG 215 (215)
T ss_dssp HHHHHHHHHHTCTGGGEEE-EESSGG-H-HHHHHHSS
T ss_pred hhHHHHHHHHhcCCCEEEE-EccCHH-H-HHHHHhCc
Confidence 3668888999999998888 999999 9 99999875
No 319
>PLN02954 phosphoserine phosphatase
Probab=77.67 E-value=2.1 Score=45.93 Aligned_cols=36 Identities=11% Similarity=-0.012 Sum_probs=18.2
Q ss_pred HHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 798 IMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 798 ~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
...++|+.++++| + .++|+||-....+..+++.+|+
T Consensus 88 g~~e~l~~l~~~g----~-~~~IvS~~~~~~i~~~l~~~gi 123 (224)
T PLN02954 88 GIPELVKKLRARG----T-DVYLVSGGFRQMIAPVAAILGI 123 (224)
T ss_pred cHHHHHHHHHHCC----C-EEEEECCCcHHHHHHHHHHhCC
Confidence 3445555555544 4 4555555555555555555444
No 320
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=77.40 E-value=2.1 Score=45.77 Aligned_cols=45 Identities=11% Similarity=-0.014 Sum_probs=35.5
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeC
Q 001492 963 VPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMK 1013 (1067)
Q Consensus 963 ~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMg 1013 (1067)
...|..|-..|+..+ +.+.+...+ .|||.| | .+||+.+++.+++.
T Consensus 157 ~c~g~~Kv~rl~~~~---~~~~~~~~a-YsDS~~-D-~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 157 RCLGHEKVAQLEQKI---GSPLKLYSG-YSDSKQ-D-NPLLAFCEHRWRVS 201 (210)
T ss_pred cCCChHHHHHHHHHh---CCChhheEE-ecCCcc-c-HHHHHhCCCcEEEC
Confidence 345666777777655 456677777 999999 9 99999999999874
No 321
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=76.91 E-value=15 Score=37.70 Aligned_cols=61 Identities=15% Similarity=0.144 Sum_probs=38.8
Q ss_pred CCceEEEEcCCchhHH-HHHHH--hcC-CCcEEEEeCCCch-hhHHHHHhhCCCChhhhhhHhHHHHhHHHhhcccccCC
Q 001492 304 VWPYVIHGHYADAGDS-AALLS--GAL-NVPMVLTGHSLGR-NKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAE 378 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~-a~~l~--~~~-giP~V~t~H~l~~-~~~~~l~~~g~~~~~~i~~~y~~~~ri~~E~~~l~~Ad 378 (1067)
.+||+|.|.++.++.+ ...+. +.+ ++|++..+-|+.. .. .+.-..+|
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~----------------------------~W~~~~~D 139 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP----------------------------FWIHPGVD 139 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc----------------------------CeecCCCC
Confidence 6799999999865444 43332 334 5787644444311 11 12357899
Q ss_pred EEEeCCHHHHHHHH
Q 001492 379 LVITSTKQEIDEQW 392 (1067)
Q Consensus 379 ~Vi~~S~~~~~~~~ 392 (1067)
..++.|++..+++.
T Consensus 140 ~y~Vase~~~~~l~ 153 (169)
T PF06925_consen 140 RYFVASEEVKEELI 153 (169)
T ss_pred EEEECCHHHHHHHH
Confidence 99999998877663
No 322
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=75.59 E-value=20 Score=39.74 Aligned_cols=124 Identities=14% Similarity=0.144 Sum_probs=72.0
Q ss_pred CCCCcEEEEEeCCCCC-------CCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhc-CCC
Q 001492 477 NPHKPMILALSRPDPK-------KNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKY-DLY 548 (1067)
Q Consensus 477 ~~~~~~Il~vgRld~~-------Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~-~l~ 548 (1067)
..++++|++...+... .+...+++.+..+. ...|+..|++=..|...... .. ....++ ...
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~--~~~p~~~lvvK~HP~~~~~~--~~-------~~~~~~~~~~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFA--KENPDAKLVVKPHPDERGGN--KY-------SYLEELPNLP 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHH--HHCCCCEEEEEECchhhCCC--Ch-------hHhhhhhcCC
Confidence 3567788888776543 24455566665553 34467778876665321111 01 222222 223
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHH
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAI 628 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~l 628 (1067)
+.+.+.. .-.+.+++..| |.++.- .+.+.+||+.+|+||++-...-.. ..|+..+....+.+
T Consensus 183 ~~~~~~~---~~~~~~Ll~~s----~~Vvti-----nStvGlEAll~gkpVi~~G~~~Y~------~~glt~~~~~~~~~ 244 (269)
T PF05159_consen 183 NVVIIDD---DVNLYELLEQS----DAVVTI-----NSTVGLEALLHGKPVIVFGRAFYA------GWGLTDDRKLDEFW 244 (269)
T ss_pred CeEEECC---CCCHHHHHHhC----CEEEEE-----CCHHHHHHHHcCCceEEecCcccC------CCCccCcCCchhhh
Confidence 3343333 35789999999 666543 467899999999999996543321 24666655444443
Q ss_pred H
Q 001492 629 A 629 (1067)
Q Consensus 629 a 629 (1067)
.
T Consensus 245 ~ 245 (269)
T PF05159_consen 245 R 245 (269)
T ss_pred h
Confidence 3
No 323
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=75.29 E-value=5.6 Score=40.94 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEEEECCC-CHHHHHHHHHhcCC
Q 001492 796 IQIMYDVFKAVRLDHQTARVTGFALSTAM-PVSETIEFLNSMKI 838 (1067)
Q Consensus 796 ~~~~~~al~~l~~~g~~g~i~~~vIaTGR-~~~~~~~~l~~l~i 838 (1067)
-+.+..+|++|+.+| + .+++||=- .+.-+++.|+.+++
T Consensus 47 ypdv~~iL~~L~~~g----v-~lavASRt~~P~~A~~~L~~l~i 85 (169)
T PF12689_consen 47 YPDVPEILQELKERG----V-KLAVASRTDEPDWARELLKLLEI 85 (169)
T ss_dssp -TTHHHHHHHHHHCT-------EEEEE--S-HHHHHHHHHHTT-
T ss_pred CcCHHHHHHHHHHCC----C-EEEEEECCCChHHHHHHHHhcCC
Confidence 367889999999987 8 89999843 46678999999877
No 324
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=75.22 E-value=1.8 Score=45.71 Aligned_cols=40 Identities=15% Similarity=0.286 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCC
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgN 1014 (1067)
.|..+++ .++...+++++ |||+.| | +.|.+.+|.||+.+.
T Consensus 132 ~k~~~l~----~~~~~~~~~v~-iGDs~~-D-~~~~~aa~~~v~~~~ 171 (205)
T PRK13582 132 GKRQAVK----ALKSLGYRVIA-AGDSYN-D-TTMLGEADAGILFRP 171 (205)
T ss_pred hHHHHHH----HHHHhCCeEEE-EeCCHH-H-HHHHHhCCCCEEECC
Confidence 4544444 44445578888 999999 9 999999999987643
No 325
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=74.01 E-value=14 Score=46.33 Aligned_cols=39 Identities=5% Similarity=0.010 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 795 MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 795 i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
+-+.++++++.++..| | .|-..||-+..+++.+..++||
T Consensus 648 vRPgV~~AV~~Cq~AG----I-tVRMVTGDNI~TAkAIA~eCGI 686 (1034)
T KOG0204|consen 648 VRPGVPEAVQLCQRAG----I-TVRMVTGDNINTAKAIARECGI 686 (1034)
T ss_pred CCCCcHHHHHHHHHcC----c-EEEEEeCCcHHHHHHHHHHccc
Confidence 4578889999999998 8 9999999999999999999987
No 326
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=73.51 E-value=10 Score=38.52 Aligned_cols=36 Identities=6% Similarity=-0.049 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
+.+.+.|+++.+. . .++|.|.-+...+..+++.++.
T Consensus 61 Pgv~efL~~l~~~-----y-el~I~T~~~~~yA~~vl~~ldp 96 (156)
T TIGR02250 61 PFLHEFLKEASKL-----Y-EMHVYTMGTRAYAQAIAKLIDP 96 (156)
T ss_pred CCHHHHHHHHHhh-----c-EEEEEeCCcHHHHHHHHHHhCc
Confidence 3566777777643 5 6788888888888888887654
No 327
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=73.49 E-value=2.4 Score=44.94 Aligned_cols=41 Identities=17% Similarity=0.153 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
+...+.++++++|++++++++ |||+.+ | +.+-+.+|..++.
T Consensus 143 ~p~~~~~~~~~~~~~~~~~~~-igDs~~-d-~~aa~~aG~~~i~ 183 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQQMVY-VGDSRV-D-IQAARAAGCPSVL 183 (213)
T ss_pred ChHHHHHHHHHcCCChhHeEE-eCCCHH-H-HHHHHHCCCeEEE
Confidence 467899999999999999998 999999 9 9999999976553
No 328
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=73.10 E-value=5 Score=42.72 Aligned_cols=44 Identities=7% Similarity=-0.019 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 965 LLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 965 ~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
..--|...++++++++|++++++++ |||+.+ | +.+-+.+|..++
T Consensus 136 ~~Kp~p~~~~~~~~~~~~~~~~~~~-iGDs~~-D-i~aa~~aG~~~i 179 (214)
T PRK13288 136 HAKPDPEPVLKALELLGAKPEEALM-VGDNHH-D-ILAGKNAGTKTA 179 (214)
T ss_pred CCCCCcHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEE
Confidence 3345788999999999999999999 999999 9 999999997554
No 329
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=72.93 E-value=2e+02 Score=33.75 Aligned_cols=87 Identities=16% Similarity=0.234 Sum_probs=51.0
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCC-chhhhcc-CCceEE--eCCCC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGG-PVDIHRA-LNNGLL--VDPHD 624 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg-~~eiv~~-~~~Gll--v~p~d 624 (1067)
.++.+..--..+++-..++.+ |++|-.-+ -.++=|++.|+|+|+=..-. ...+.++ +-.++. +.|.|
T Consensus 266 ~~i~~~~d~~~~~~~~~l~~~----dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~ 336 (385)
T COG2327 266 AEILVSSDEYAEELGGILAAC----DLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLD 336 (385)
T ss_pred cceEeecchHHHHHHHHhccC----ceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCc
Confidence 455543321134566688888 88773311 26778999999999966422 2223222 123333 45677
Q ss_pred HHHHHHHHHHhhc-CHHHHHH
Q 001492 625 QQAIADALLKLVS-EKNLWVE 644 (1067)
Q Consensus 625 ~~~la~aL~~ll~-d~~~~~~ 644 (1067)
.+.+.....+.++ .++++++
T Consensus 337 ~~~l~~~~~e~~~~~~~~~~~ 357 (385)
T COG2327 337 AEILSAVVLERLTKLDELRER 357 (385)
T ss_pred hHHHHHHHHHHHhccHHHHhh
Confidence 8888888887777 4444333
No 330
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=72.59 E-value=3.2 Score=46.17 Aligned_cols=37 Identities=16% Similarity=0.289 Sum_probs=32.3
Q ss_pred CCHHHHHH-HHHHHhC--CCcccEEEEecCCCCCChhhhhcCC
Q 001492 967 ASRSQALR-YLFVRWR--LNVANMFVILGESGDTDYEELISGA 1006 (1067)
Q Consensus 967 asKg~AL~-~L~~~~g--i~~e~vva~fGDs~N~D~~eML~~a 1006 (1067)
.+|...+. ..+++++ ++++++|+ +||+.| | +.|..++
T Consensus 191 ~~K~~~v~~~~~~~~~~~~~~~~vI~-vGDs~~-D-l~ma~g~ 230 (277)
T TIGR01544 191 FNKNHDVALRNTEYFNQLKDRSNIIL-LGDSQG-D-LRMADGV 230 (277)
T ss_pred cccHHHHHHHHHHHhCccCCcceEEE-ECcChh-h-hhHhcCC
Confidence 57877666 6899999 89999999 999999 9 9998876
No 331
>PTZ00445 p36-lilke protein; Provisional
Probab=72.07 E-value=2.8 Score=44.35 Aligned_cols=50 Identities=12% Similarity=0.206 Sum_probs=40.0
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCce-EEEeCCC
Q 001492 963 VPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK-TLIMKGV 1015 (1067)
Q Consensus 963 ~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~-gVaMgNA 1015 (1067)
.|.-..|..=++++++++|+++++++. |.|... . ++--+.+|. ++...++
T Consensus 157 KPdp~iK~yHle~ll~~~gl~peE~LF-IDD~~~-N-VeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 157 APMPLDKSYHLKQVCSDFNVNPDEILF-IDDDMN-N-CKNALKEGYIALHVTGN 207 (219)
T ss_pred CCCccchHHHHHHHHHHcCCCHHHeEe-ecCCHH-H-HHHHHHCCCEEEEcCCh
Confidence 456667888889999999999999988 999987 6 888888774 5555544
No 332
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=70.98 E-value=4.3 Score=42.09 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=34.4
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 963 VPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 963 ~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
+..+-.|+.+|+.|.+ |.+.+.++. +||+.| | ++|...+..=++-
T Consensus 154 tsdsggKa~~i~~lrk--~~~~~~~~m-vGDGat-D-lea~~pa~afi~~ 198 (227)
T KOG1615|consen 154 TSDSGGKAEVIALLRK--NYNYKTIVM-VGDGAT-D-LEAMPPADAFIGF 198 (227)
T ss_pred cccCCccHHHHHHHHh--CCChheeEE-ecCCcc-c-cccCCchhhhhcc
Confidence 3445579999999999 777777888 999999 9 9988774433333
No 333
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=70.97 E-value=3.2 Score=42.32 Aligned_cols=39 Identities=10% Similarity=0.074 Sum_probs=25.5
Q ss_pred EEEEeCCCCCCCC----------ch-h-hHHHHHHHHHHHHhcCCCCceeEEEEEC
Q 001492 779 VIALDCYDSKGAP----------DK-K-MIQIMYDVFKAVRLDHQTARVTGFALST 822 (1067)
Q Consensus 779 lia~DiDGTLl~~----------~~-~-i~~~~~~al~~l~~~g~~g~i~~~vIaT 822 (1067)
+.++|+||||..+ +. + +.+.+.++|+++.++| . .+||.|
T Consensus 2 ia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~G----y-~IvIvT 52 (159)
T PF08645_consen 2 IAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKG----Y-KIVIVT 52 (159)
T ss_dssp EEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTT----E-EEEEEE
T ss_pred EEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcC----C-eEEEEe
Confidence 3455999995432 11 2 3457899999999987 5 688887
No 334
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=70.05 E-value=4.2 Score=43.46 Aligned_cols=41 Identities=17% Similarity=0.114 Sum_probs=31.9
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeC
Q 001492 966 LASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMK 1013 (1067)
Q Consensus 966 gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMg 1013 (1067)
|..|..+++.+. ...+++++ +||+.| | +.|++.++..+|=+
T Consensus 142 g~~K~~~l~~~~----~~~~~~i~-iGDg~~-D-~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 142 GCCKPSLIRKLS----EPNDYHIV-IGDSVT-D-VEAAKQSDLCFARD 182 (214)
T ss_pred CCCHHHHHHHHh----hcCCcEEE-EeCCHH-H-HHHHHhCCeeEehH
Confidence 346888888664 35677877 999999 9 99999999966644
No 335
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=69.47 E-value=1.4e+02 Score=33.33 Aligned_cols=40 Identities=30% Similarity=0.355 Sum_probs=29.8
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 001492 555 KHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 555 g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~ 603 (1067)
...+.+++..+++.| +++|-..++ .++=|+.+|+|+|+-.
T Consensus 237 ~~~~~~e~~~~i~~~----~~vI~~RlH-----~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 237 SPLDPEELLGLFASA----RLVIGMRLH-----ALILAAAAGVPFVALS 276 (298)
T ss_pred ecCCHHHHHHHHhhC----CEEEEechH-----HHHHHHHcCCCEEEee
Confidence 444567888899999 887744332 5778899999999763
No 336
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=69.43 E-value=16 Score=35.50 Aligned_cols=41 Identities=12% Similarity=0.179 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHh-CCCcccEEEEecC-CCCCChhhhhcCCceEEE
Q 001492 968 SRSQALRYLFVRW-RLNVANMFVILGE-SGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 968 sKg~AL~~L~~~~-gi~~e~vva~fGD-s~N~D~~eML~~ag~gVa 1011 (1067)
.|...+.++++++ ++++++++. +|| ..+ | +.+-+.+|...+
T Consensus 86 P~~~~~~~~~~~~~~~~~~~~v~-IGD~~~~-D-i~~A~~~Gi~~i 128 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPEESVY-VGDQDLT-D-LQAAKRAGLAFI 128 (132)
T ss_pred CChHHHHHHHHHcCCCChhheEE-EcCCCcc-c-HHHHHHCCCeEE
Confidence 3678999999999 599999999 999 688 9 999988886543
No 337
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=68.88 E-value=5 Score=40.54 Aligned_cols=52 Identities=10% Similarity=0.087 Sum_probs=36.5
Q ss_pred EEEeCCCCCCCCchh-------------------hHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcC
Q 001492 780 IALDCYDSKGAPDKK-------------------MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMK 837 (1067)
Q Consensus 780 ia~DiDGTLl~~~~~-------------------i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~ 837 (1067)
+++|+||||...... +-+.+.+.|+.+.+. . .++|.|..+...+..+++.+.
T Consensus 3 LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-----~-ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 3 LVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-----Y-EVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp EEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-----C-EEEEE-SS-HHHHHHHHHHHT
T ss_pred EEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-----c-eEEEEEeehhhhhhHHHHhhh
Confidence 445999997653211 457788999999765 5 789999999999999998865
No 338
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=68.44 E-value=5.3 Score=41.21 Aligned_cols=46 Identities=7% Similarity=0.007 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEE
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALIC 848 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~ 848 (1067)
+.+.++|+.|++.| + .++|+|+.....+..+++.+++. ..|+.+++
T Consensus 75 ~g~~~ll~~l~~~g----~-~~~i~S~~~~~~~~~~l~~~~l~-~~f~~i~~ 120 (188)
T TIGR01489 75 PGFKEFIAFIKEHG----I-DFIVISDGNDFFIDPVLEGIGEK-DVFIEIYS 120 (188)
T ss_pred ccHHHHHHHHHHcC----C-cEEEEeCCcHHHHHHHHHHcCCh-hheeEEec
Confidence 44668888888886 6 78999999899999999998774 23445554
No 339
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=68.25 E-value=8.5 Score=39.30 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=50.3
Q ss_pred HHHHHHHhcCCcEE-EEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCC
Q 001492 937 DLRQKLRMRGLRCH-PMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGV 1015 (1067)
Q Consensus 937 el~~~L~~~~~~~~-v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA 1015 (1067)
.+.+.+...+..+. +++|... .-+-....--|...+.++++++++++++++. +||+.+ | +++-+.+|...+.=+.
T Consensus 73 ~~~~~l~~~gl~fd~ii~~~~~-~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~-IGD~~~-D-i~~A~~aGi~~i~~~~ 148 (161)
T TIGR01261 73 LMLQIFRSQGIIFDDVLICPHF-PDDNCDCRKPKIKLLEPYLKKNLIDKARSYV-IGDRET-D-MQLAENLGIRGIQYDE 148 (161)
T ss_pred HHHHHHHHCCCceeEEEECCCC-CCCCCCCCCCCHHHHHHHHHHcCCCHHHeEE-EeCCHH-H-HHHHHHCCCeEEEECh
Confidence 45555666666553 3333100 0011122234678899999999999999999 999999 9 9999999987665443
No 340
>COG4996 Predicted phosphatase [General function prediction only]
Probab=67.54 E-value=12 Score=36.22 Aligned_cols=47 Identities=13% Similarity=0.162 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEE
Q 001492 796 IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALIC 848 (1067)
Q Consensus 796 ~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~ 848 (1067)
-+..++.+++++..| +| +..+|=.-..-+.+.|..+++. .-|+++|.
T Consensus 43 ~~~v~~~l~warnsG---~i--~~~~sWN~~~kA~~aLral~~~-~yFhy~Vi 89 (164)
T COG4996 43 FPDVKETLKWARNSG---YI--LGLASWNFEDKAIKALRALDLL-QYFHYIVI 89 (164)
T ss_pred cHHHHHHHHHHHhCC---cE--EEEeecCchHHHHHHHHHhchh-hhEEEEEe
Confidence 367889999999884 56 8999999888899999998775 34555544
No 341
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=66.47 E-value=22 Score=47.03 Aligned_cols=40 Identities=10% Similarity=0.039 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
++-+..-+.|.+|++.| | ++-+.||=-.+++..+.-++++
T Consensus 651 kLQdgVPetI~~L~~AG----I-KIWVLTGDK~ETAiNIg~sC~L 690 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAG----I-KIWVLTGDKQETAINIGYSCRL 690 (1151)
T ss_pred hhccCchHHHHHHHHcC----C-EEEEEcCcHHHHHHHHHHhhcC
Confidence 34445558888899988 9 9999999999999999888776
No 342
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=65.71 E-value=76 Score=35.67 Aligned_cols=126 Identities=21% Similarity=0.167 Sum_probs=74.8
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCCCc-CCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWS-YGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLR 268 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~~~-y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 268 (1067)
.-|-++.+-.|.+.|.++| |+|-|++-.++.|....+ .|..+ ...+....+|+.+..+|..-.-.
T Consensus 61 GaGKSTli~~L~~~l~~~G--~rVaVlAVDPSSp~TGGsiLGDRi---------RM~~~~~~~~vFiRs~~srG~lG--- 126 (323)
T COG1703 61 GAGKSTLIEALGRELRERG--HRVAVLAVDPSSPFTGGSILGDRI---------RMQRLAVDPGVFIRSSPSRGTLG--- 126 (323)
T ss_pred CCchHHHHHHHHHHHHHCC--cEEEEEEECCCCCCCCccccccHh---------hHHhhccCCCeEEeecCCCccch---
Confidence 3388899999999999999 999999987666543211 12222 22334446788887777532211
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCchhhHHHHHh
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLK 348 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~ 348 (1067)
++.+......+.|.. ..+|+|.....-.|-.=.-+...-.+-++++..+.|.+. |.++
T Consensus 127 -------------GlS~at~~~i~~ldA-------aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~GD~~--Q~iK 184 (323)
T COG1703 127 -------------GLSRATREAIKLLDA-------AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGAGDDL--QGIK 184 (323)
T ss_pred -------------hhhHHHHHHHHHHHh-------cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCCCcHH--HHHH
Confidence 111111111122221 459999998765554444455555677788888876654 4555
Q ss_pred hCC
Q 001492 349 QGR 351 (1067)
Q Consensus 349 ~g~ 351 (1067)
.|.
T Consensus 185 ~Gi 187 (323)
T COG1703 185 AGI 187 (323)
T ss_pred hhh
Confidence 443
No 343
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=65.09 E-value=11 Score=39.08 Aligned_cols=41 Identities=7% Similarity=0.077 Sum_probs=29.4
Q ss_pred eEEEEEEeCCCCCCCCch---------hhHHHHHHHHHHHHhcCCCCceeEEEEECC
Q 001492 776 RLIVIALDCYDSKGAPDK---------KMIQIMYDVFKAVRLDHQTARVTGFALSTA 823 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~---------~i~~~~~~al~~l~~~g~~g~i~~~vIaTG 823 (1067)
+++|+ |-|||+.-+.. .+.+.+.+++.++++.| . .+|++|=
T Consensus 6 k~lfl--DRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~g----y-~lVvvTN 55 (181)
T COG0241 6 KALFL--DRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAG----Y-KLVVVTN 55 (181)
T ss_pred cEEEE--cCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCC----C-eEEEEEC
Confidence 55566 99999543322 24577889999999887 5 6888873
No 344
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=64.84 E-value=45 Score=34.39 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=23.3
Q ss_pred CCceEEEEcCCchhHHHHHHHhcC------CCcEEE
Q 001492 304 VWPYVIHGHYADAGDSAALLSGAL------NVPMVL 333 (1067)
Q Consensus 304 ~~pDvIh~h~~~a~~~a~~l~~~~------giP~V~ 333 (1067)
.+||+|.++.+..+....++++.+ |.++|+
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIy 126 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIY 126 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEE
Confidence 469999999987666666667666 788765
No 345
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=64.60 E-value=5.2 Score=42.23 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
-+...+..+++++|++++++++ |||+.+ | +.+-+.+|..++
T Consensus 132 P~~~~~~~~~~~~~~~~~~~l~-igD~~~-D-i~aA~~~Gi~~i 172 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPEDAVM-VGDAVT-D-LASARAAGTATV 172 (205)
T ss_pred CChHHHHHHHHHcCCChhheEE-EcCCHH-H-HHHHHHcCCeEE
Confidence 3678899999999999999999 999999 9 999999987654
No 346
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=64.16 E-value=10 Score=39.87 Aligned_cols=34 Identities=3% Similarity=-0.034 Sum_probs=24.9
Q ss_pred HHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 800 YDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 800 ~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.++|+.++++ + .++|+|+.....+..+++.++++
T Consensus 74 ~e~L~~L~~~-----~-~~~IvS~~~~~~~~~~l~~~gl~ 107 (205)
T PRK13582 74 VEFLDWLRER-----F-QVVILSDTFYEFAGPLMRQLGWP 107 (205)
T ss_pred HHHHHHHHhc-----C-CEEEEeCCcHHHHHHHHHHcCCc
Confidence 4566666543 4 67888888888888888888774
No 347
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=64.09 E-value=9.7 Score=37.05 Aligned_cols=25 Identities=12% Similarity=0.229 Sum_probs=21.4
Q ss_pred ccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 985 ANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 985 e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
+.+++ +||+.| | +-||+.+..||+.
T Consensus 94 ~k~vm-VGnGaN-D-~laLr~ADlGI~t 118 (152)
T COG4087 94 EKVVM-VGNGAN-D-ILALREADLGICT 118 (152)
T ss_pred cEEEE-ecCCcc-h-HHHhhhcccceEE
Confidence 44666 999999 9 9999999999754
No 348
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=63.78 E-value=13 Score=45.08 Aligned_cols=152 Identities=14% Similarity=0.109 Sum_probs=93.5
Q ss_pred CCcEEEEEeCCC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCC
Q 001492 479 HKPMILALSRPD-PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHH 557 (1067)
Q Consensus 479 ~~~~Il~vgRld-~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~ 557 (1067)
.+++.+..|.-+ .+||-...++++.+.- .+.--|...+. ....+..-|.=+|.+
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~------eih~tV~~~~~-------------------~~~~~P~~V~NHG~l 330 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYM------EIHGTVYDEPQ-------------------RPPNVPSFVKNHGIL 330 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhc------EEEEEeccCCC-------------------CCcccchhhhhcCcC
Confidence 455666667655 4778888888876552 22222222211 001122346667888
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCCEEEcCCCCch---------------hhh------c---
Q 001492 558 KQYDVPEIYRLAAKTKGVFINPAL-VEPFGLTLIEAAAHGLPMVATKNGGPV---------------DIH------R--- 612 (1067)
Q Consensus 558 ~~~dl~~ly~~A~~~~dV~v~ps~-~EgfgltllEAmA~G~PVVat~~Gg~~---------------eiv------~--- 612 (1067)
+..|+..+++.| -|||=--. +| |=+.+||+|.|+|.|-...-.+. ++. +
T Consensus 331 ~~~ef~~lL~~a----kvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 331 SGDEFQQLLRKA----KVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred CHHHHHHHHHhh----hEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 899999999999 89984421 22 34789999999998876643221 110 0
Q ss_pred cCCceEEeCCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 001492 613 ALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVA 670 (1067)
Q Consensus 613 ~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 670 (1067)
.-..-+.|+-+|.+++-+||.++++.+- --++ -.|+-+.+.++...+++
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~~~v---------~Py~P~efT~egmLeRv~~~ie 454 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILATPV---------EPYLPYEFTCEGMLERVNALIE 454 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhcCC---------CCcCCcccCHHHHHHHHHHHHH
Confidence 1123577888999999999999998752 1222 25666555555544443
No 349
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=62.57 E-value=13 Score=37.07 Aligned_cols=42 Identities=12% Similarity=0.159 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 967 ASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 967 asKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
=-+...+.++++++|+++++++. |||+.. | ++.=+.+|+..+
T Consensus 101 KP~~~~~~~~~~~~~~~~~e~i~-IGDs~~-D-i~~A~~~Gi~~v 142 (147)
T TIGR01656 101 KPKPGLILEALKRLGVDASRSLV-VGDRLR-D-LQAARNAGLAAV 142 (147)
T ss_pred CCCHHHHHHHHHHcCCChHHEEE-EcCCHH-H-HHHHHHCCCCEE
Confidence 34788899999999999999999 999988 8 888888886544
No 350
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=62.12 E-value=19 Score=42.41 Aligned_cols=56 Identities=11% Similarity=0.223 Sum_probs=44.5
Q ss_pred cCCeEEEEEEeCCCCCCC---------------C-chhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHh
Q 001492 773 RRRRLIVIALDCYDSKGA---------------P-DKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNS 835 (1067)
Q Consensus 773 ~r~klllia~DiDGTLl~---------------~-~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~ 835 (1067)
+++|++++ |+|+||.. . ....-...++.|+.++++| + .++|||=.+...+++.+..
T Consensus 220 ~~kK~LVL--DLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqG----V-lLav~SKN~~~da~evF~k 291 (574)
T COG3882 220 KSKKALVL--DLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQG----V-LLAVCSKNTEKDAKEVFRK 291 (574)
T ss_pred cccceEEE--ecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhcc----E-EEEEecCCchhhHHHHHhh
Confidence 44587766 99999543 1 2345578889999999998 8 8999999999999998887
No 351
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=62.10 E-value=18 Score=38.15 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=43.7
Q ss_pred ccCCeEEEEEEeCCCCCCCCc-------hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 772 RRRRRLIVIALDCYDSKGAPD-------KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 772 ~~r~klllia~DiDGTLl~~~-------~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
+.-||++++ |+|+||.+.. --.-|.+.+.|+.+.+. . .++|=|.....-+...+..+++
T Consensus 18 ~~~kklLVL--DLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~-----f-eIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 18 REGKKLLVL--DIDYTLFDHRSPAETGEELMRPYLHEFLTSAYED-----Y-DIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCCCcEEEE--eCCCceEcccccCCCceEEeCCCHHHHHHHHHhC-----C-EEEEEecCCHHHHHHHHHHhcc
Confidence 445576666 9999987641 11346788999999876 4 6788888778888899998765
No 352
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=61.40 E-value=11 Score=40.99 Aligned_cols=52 Identities=10% Similarity=0.224 Sum_probs=41.6
Q ss_pred EecCCCCHHHHHHHHHHHh---CCCcccEEEEecCCCCCChhhhhcCCceEEEeCCC
Q 001492 962 IVPLLASRSQALRYLFVRW---RLNVANMFVILGESGDTDYEELISGAHKTLIMKGV 1015 (1067)
Q Consensus 962 I~p~gasKg~AL~~L~~~~---gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA 1015 (1067)
--|.+.-||..|+.+.... |++-++++. +||+.| ||=.+++.-..-+||.--
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviY-iGDG~n-D~Cp~~~L~~~D~v~~R~ 198 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIY-IGDGRN-DFCPALRLRPRDVVFPRK 198 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEE-ECCCCC-CcCcccccCCCCEEecCC
Confidence 4467778999999999874 787888888 999999 988888866666776543
No 353
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=60.99 E-value=20 Score=37.03 Aligned_cols=39 Identities=5% Similarity=0.037 Sum_probs=24.4
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMK 837 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~ 837 (1067)
.|.+..++.++++++++ + .|++.||=+-..+.++|+.+.
T Consensus 73 ~Idp~fKef~e~ike~d----i-~fiVvSsGm~~fI~~lfe~iv 111 (220)
T COG4359 73 KIDPGFKEFVEWIKEHD----I-PFIVVSSGMDPFIYPLFEGIV 111 (220)
T ss_pred ccCccHHHHHHHHHHcC----C-CEEEEeCCCchHHHHHHHhhc
Confidence 34566777888888886 4 444444434556777777754
No 354
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=60.05 E-value=6.5 Score=42.12 Aligned_cols=38 Identities=21% Similarity=0.226 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 967 ASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 967 asKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
..|..+++ +++.+.+++++ +||+.+ | +.|.+.+|..+|
T Consensus 147 ~~K~~~l~----~~~~~~~~~i~-iGDs~~-D-i~aa~~Ag~~~a 184 (219)
T PRK09552 147 CCKPSLIR----KLSDTNDFHIV-IGDSIT-D-LEAAKQADKVFA 184 (219)
T ss_pred CchHHHHH----HhccCCCCEEE-EeCCHH-H-HHHHHHCCccee
Confidence 34776665 45778889988 999999 9 999999998666
No 355
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=60.01 E-value=60 Score=39.26 Aligned_cols=159 Identities=18% Similarity=0.186 Sum_probs=87.2
Q ss_pred CcEEEEEeCCC-----CCCCHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcC--CCCcEE
Q 001492 480 KPMILALSRPD-----PKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYD--LYGQVA 552 (1067)
Q Consensus 480 ~~~Il~vgRld-----~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~--l~~~V~ 552 (1067)
..++++.|... +.+-...++.+++.+ +++.++.--+++... . ..+.+. -.++|.
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~------~~~~FiW~~~~~~~~---------~----~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL------QGVTFLWKYRPDDSI---------Y----FPEGLPNRGRGNVV 338 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC------CCceEEEEecCCcch---------h----hhhcCCCCCcCceE
Confidence 45666677764 455666777777766 234333322221000 0 111111 245799
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC-C---Cc-hhhhccCCceEEeC--CCCH
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN-G---GP-VDIHRALNNGLLVD--PHDQ 625 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~-G---g~-~eiv~~~~~Gllv~--p~d~ 625 (1067)
+.++.|+.++. .+....+.||. .-|+|-| +|++.+|+|+|+... | -. .-+.+.+..+++.. ..+.
T Consensus 339 ~~~W~PQ~~ll----l~H~~v~~FvT---HgG~nSt-~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~ 410 (496)
T KOG1192|consen 339 LSKWAPQNDLL----LDHPAVGGFVT---HGGWNST-LESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSE 410 (496)
T ss_pred EecCCCcHHHh----cCCCcCcEEEE---CCcccHH-HHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcH
Confidence 99999988876 22222355552 3455555 999999999996543 2 12 22344444444432 2233
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHH
Q 001492 626 QAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHCRTYLT 667 (1067)
Q Consensus 626 ~~la~aL~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~ 667 (1067)
+ +.+++..++++++..+...+-..... +..+. ..+..+.+
T Consensus 411 ~-~~~~~~~il~~~~y~~~~~~l~~~~~~~p~~~-~~~~~~~e 451 (496)
T KOG1192|consen 411 E-LLEAIKEILENEEYKEAAKRLSEILRDQPISP-ELAVKWVE 451 (496)
T ss_pred H-HHHHHHHHHcChHHHHHHHHHHHHHHcCCCCH-HHHHHHHH
Confidence 3 89999999998876555444443333 34555 55554433
No 356
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=59.73 E-value=56 Score=39.42 Aligned_cols=72 Identities=13% Similarity=0.147 Sum_probs=50.0
Q ss_pred CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCC-CEEEcCC--CCchhhhccCCceEEeCCCCHHHHHHHHHHh
Q 001492 559 QYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL-PMVATKN--GGPVDIHRALNNGLLVDPHDQQAIADALLKL 635 (1067)
Q Consensus 559 ~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~-PVVat~~--Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~l 635 (1067)
...+.++++.+ -.++.|+-.++..-.+.||+.+|| |||-++. ....+.+.--.-++.++ .+++-+.|.+.
T Consensus 334 ~~~y~~~m~~S----~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~i 406 (464)
T KOG1021|consen 334 PLNYMEGMQDS----KFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNI 406 (464)
T ss_pred cchHHHHhhcC----eEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHH
Confidence 46788889999 888999988989899999999995 9999985 33344443334466664 34443333444
Q ss_pred hc
Q 001492 636 VS 637 (1067)
Q Consensus 636 l~ 637 (1067)
|.
T Consensus 407 L~ 408 (464)
T KOG1021|consen 407 LL 408 (464)
T ss_pred HH
Confidence 43
No 357
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=58.07 E-value=18 Score=37.90 Aligned_cols=46 Identities=20% Similarity=0.286 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcC
Q 001492 799 MYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 799 ~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
..++|+.|+++| + .++|+||.+...+...++.+|+. ..|+.+++..
T Consensus 111 ~~~~L~~l~~~g----~-~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~~~ 156 (197)
T TIGR01548 111 PKGLLRELHRAP----K-GMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIWME 156 (197)
T ss_pred HHHHHHHHHHcC----C-cEEEECCCCHHHHHHHHHHcCch-hhCCEEEeec
Confidence 378888898887 7 89999999999999999999885 3466666643
No 358
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=57.54 E-value=11 Score=38.85 Aligned_cols=40 Identities=5% Similarity=-0.048 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
+-..+.+.++++|++++++++ |||+.. | ++.=+.+|..++
T Consensus 144 ~p~~~~~~~~~~~~~~~~~l~-igDs~~-d-i~aA~~aG~~~i 183 (188)
T PRK10725 144 APDTFLRCAQLMGVQPTQCVV-FEDADF-G-IQAARAAGMDAV 183 (188)
T ss_pred ChHHHHHHHHHcCCCHHHeEE-EeccHh-h-HHHHHHCCCEEE
Confidence 556799999999999999999 999999 9 888777776543
No 359
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=57.15 E-value=10 Score=36.85 Aligned_cols=52 Identities=8% Similarity=0.053 Sum_probs=42.6
Q ss_pred EEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 781 ALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 781 a~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+-++++|+... .++-+++.+.|++|... + .++||||-.+.++.+.++-.|++
T Consensus 18 ~~~v~~tiatg-Gklf~ev~e~iqeL~d~-----V-~i~IASgDr~gsl~~lae~~gi~ 69 (152)
T COG4087 18 AGKVLYTIATG-GKLFSEVSETIQELHDM-----V-DIYIASGDRKGSLVQLAEFVGIP 69 (152)
T ss_pred cceEEEEEccC-cEEcHhhHHHHHHHHHh-----h-eEEEecCCcchHHHHHHHHcCCc
Confidence 34666774433 56778889999999987 7 89999999999999999998886
No 360
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=56.65 E-value=18 Score=39.64 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+.+.++|+.|+++| + .++|+|+.+...+...++.+++. ..||.+||..
T Consensus 111 pgv~e~L~~L~~~g----~-~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~iv~~~ 158 (248)
T PLN02770 111 NGLYKLKKWIEDRG----L-KRAAVTNAPRENAELMISLLGLS-DFFQAVIIGS 158 (248)
T ss_pred ccHHHHHHHHHHcC----C-eEEEEeCCCHHHHHHHHHHcCCh-hhCcEEEecC
Confidence 45678899999887 7 89999999999999999998885 3477777754
No 361
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=55.89 E-value=29 Score=35.39 Aligned_cols=36 Identities=11% Similarity=-0.031 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
+.+.+.|+.+.+. . .++|.|.-+...+..+++.++.
T Consensus 45 Pgl~eFL~~l~~~-----y-ei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 45 PHVDEFLERVSKW-----Y-ELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CCHHHHHHHHHhc-----C-EEEEEcCCcHHHHHHHHHHHCc
Confidence 5678999999865 4 7888888888889999998664
No 362
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=55.67 E-value=11 Score=40.50 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCc---eEEEeCC
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAH---KTLIMKG 1014 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag---~gVaMgN 1014 (1067)
.-..+.++++.+|+++++++. +||+.+ | +.|=+.+| .+|..|.
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~-VGDs~~-D-i~aA~~Ag~~~v~v~~g~ 192 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALM-VGDSLN-D-ILAAKAAGVPAVGVTWGY 192 (220)
T ss_pred CHHHHHHHHHHhCCChhheEE-ECCCHH-H-HHHHHHcCCCEEEEECCC
Confidence 567888999999999778888 999999 9 99999998 5566665
No 363
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=55.01 E-value=22 Score=38.14 Aligned_cols=46 Identities=15% Similarity=0.261 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEE
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALIC 848 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~ 848 (1067)
+.++++|.+|++.| + .++|+|+++...+..+++.+|+. ..|+.++|
T Consensus 92 ~gv~e~L~~L~~~g----~-~l~i~T~k~~~~~~~~l~~~gl~-~~F~~i~g 137 (220)
T COG0546 92 PGVKELLAALKSAG----Y-KLGIVTNKPERELDILLKALGLA-DYFDVIVG 137 (220)
T ss_pred CCHHHHHHHHHhCC----C-eEEEEeCCcHHHHHHHHHHhCCc-cccceEEc
Confidence 55679999999997 7 89999999999999999999986 45777777
No 364
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=52.87 E-value=15 Score=39.91 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=0.0
Q ss_pred ccCCeEEEEEEeCCCCCCCCchhhHHHHHHHHHHH
Q 001492 772 RRRRRLIVIALDCYDSKGAPDKKMIQIMYDVFKAV 806 (1067)
Q Consensus 772 ~~r~klllia~DiDGTLl~~~~~i~~~~~~al~~l 806 (1067)
+...++-.|.+|+||||.+....+.....++++.+
T Consensus 5 ~~~~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~ 39 (238)
T PRK10748 5 RPLGRISALTFDLDDTLYDNRPVILRTEQEALAFV 39 (238)
T ss_pred cCCCCceeEEEcCcccccCChHHHHHHHHHHHHHH
No 365
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=52.01 E-value=3.3e+02 Score=29.13 Aligned_cols=46 Identities=20% Similarity=0.212 Sum_probs=35.1
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~ 603 (1067)
.........+..++..+++.| +++|-..++ .++=|+++|+|+|+-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~----~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 238 NVIIIDYSLSPDELLELISQA----DLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred ceeEecCCCCHHHHHHHHhcC----CEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 345556666778999999999 898865443 5677899999999854
No 366
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=51.50 E-value=14 Score=41.43 Aligned_cols=70 Identities=20% Similarity=0.196 Sum_probs=48.8
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCC-CEEEcCC--CCchhhhccCCceEEeCCCCHHHHHHHHH
Q 001492 560 YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGL-PMVATKN--GGPVDIHRALNNGLLVDPHDQQAIADALL 633 (1067)
Q Consensus 560 ~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~-PVVat~~--Gg~~eiv~~~~~Gllv~p~d~~~la~aL~ 633 (1067)
.+..+.|+.+ ..++.|.-..++..-++|||++|| |||.++. =...+++.-....+.|+..+..+|-+.|.
T Consensus 228 ~~~~~~l~~S----~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~ 300 (302)
T PF03016_consen 228 SEYMELLRNS----KFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR 300 (302)
T ss_pred hHHHHhcccC----eEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence 4577888888 788887766668889999999995 8888662 23345554344577777666655555444
No 367
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=51.31 E-value=10 Score=39.08 Aligned_cols=41 Identities=7% Similarity=-0.007 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
-+...+++.+++++++++++++ |||+.+ | +..=+.+|..++
T Consensus 142 p~p~~~~~~~~~~~~~~~~~v~-vgD~~~-d-i~aA~~aG~~~i 182 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPSECIG-IEDAQA-G-IEAIKAAGMFAV 182 (185)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EecCHH-H-HHHHHHcCCEEE
Confidence 4678889999999999999999 999999 9 999888886543
No 368
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=51.22 E-value=22 Score=37.76 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEE
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALIC 848 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~ 848 (1067)
+.+.++|+.|+++| + .++|+||.....+...++.+++. ..|+.+++
T Consensus 85 ~g~~~~l~~L~~~g----~-~~~i~S~~~~~~~~~~l~~~gl~-~~f~~i~~ 130 (214)
T PRK13288 85 ETVYETLKTLKKQG----Y-KLGIVTTKMRDTVEMGLKLTGLD-EFFDVVIT 130 (214)
T ss_pred cCHHHHHHHHHHCC----C-eEEEEeCCCHHHHHHHHHHcCCh-hceeEEEe
Confidence 66779999999887 7 89999999999999999998885 23566665
No 369
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=50.55 E-value=1.2e+02 Score=33.47 Aligned_cols=40 Identities=20% Similarity=0.275 Sum_probs=29.8
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCC
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVS 221 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~ 221 (1067)
.++|||++....|. ...-+..|+++|.+.| +|+|+++...
T Consensus 3 ~~~M~ILltNDDGi----------------~a~Gi~aL~~~l~~~g---~V~VvAP~~~ 42 (257)
T PRK13932 3 DKKPHILVCNDDGI----------------EGEGIHVLAASMKKIG---RVTVVAPAEP 42 (257)
T ss_pred CCCCEEEEECCCCC----------------CCHHHHHHHHHHHhCC---CEEEEcCCCC
Confidence 46799999987775 1234677899998886 6999988643
No 370
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=50.46 E-value=12 Score=38.80 Aligned_cols=43 Identities=9% Similarity=0.012 Sum_probs=25.7
Q ss_pred eEEEEEEeCCCCCCCCc---------hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCC
Q 001492 776 RLIVIALDCYDSKGAPD---------KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP 825 (1067)
Q Consensus 776 klllia~DiDGTLl~~~---------~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~ 825 (1067)
|+++| |.||||.-.. -.+-+.+.++|++|+++| + .++|+|..+
T Consensus 4 ~~~~~--d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g----~-~l~I~Tn~~ 55 (181)
T PRK08942 4 KAIFL--DRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAG----Y-RVVVATNQS 55 (181)
T ss_pred cEEEE--ECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCC----C-EEEEEeCCc
Confidence 66666 9999953211 012245567777777765 5 566666553
No 371
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=50.42 E-value=38 Score=43.39 Aligned_cols=42 Identities=10% Similarity=0.086 Sum_probs=37.3
Q ss_pred hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 793 KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 793 ~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+++-+.++.+|++|.+.. | ..+.+||-++.++....+++|+-
T Consensus 704 NkLK~~T~~VI~eL~~An----I-RtVMcTGDNllTaisVakeCgmi 745 (1140)
T KOG0208|consen 704 NKLKEETKRVIDELNRAN----I-RTVMCTGDNLLTAISVAKECGMI 745 (1140)
T ss_pred cccccccHHHHHHHHhhc----c-eEEEEcCCchheeeehhhccccc
Confidence 566788999999999876 9 99999999999999999998873
No 372
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=50.22 E-value=26 Score=36.75 Aligned_cols=40 Identities=10% Similarity=0.072 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
.+-+.++++|+.|++.| + .++|+||-+...+..+.+.+||
T Consensus 127 ~~~~~~~~~l~~L~~~G----i-~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAG----I-KVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp EBHTTHHHHHHHHHHTT----E-EEEEEESSEHHHHHHHHHHTTS
T ss_pred cchhhhhhhhhhhhccC----c-ceeeeecccccccccccccccc
Confidence 45678899999999998 8 9999999999999999999998
No 373
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=49.80 E-value=21 Score=37.67 Aligned_cols=47 Identities=19% Similarity=0.236 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+|+.+...+..+++.+++. ..||.++|+
T Consensus 88 ~g~~~~L~~l~~~g----~-~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 134 (213)
T TIGR01449 88 PGVEATLGALRAKG----L-RLGLVTNKPTPLARPLLELLGLA-KYFSVLIGG 134 (213)
T ss_pred CCHHHHHHHHHHCC----C-eEEEEeCCCHHHHHHHHHHcCcH-hhCcEEEec
Confidence 55678899999886 7 79999999999999999998875 236766654
No 374
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=49.52 E-value=12 Score=39.85 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhCCC-cccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 969 RSQALRYLFVRWRLN-VANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~-~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
+...+.++++++|++ ++++++ |||+.+ | +.+=+.+|..++
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~-igD~~~-D-i~aa~~aG~~~~ 187 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAV-AGDTPN-D-LEAGINAGAGAV 187 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEE-eCCCHH-H-HHHHHHCCCCeE
Confidence 678999999999997 799999 999998 9 999999999873
No 375
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=49.51 E-value=13 Score=41.76 Aligned_cols=41 Identities=10% Similarity=0.000 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeC
Q 001492 970 SQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMK 1013 (1067)
Q Consensus 970 g~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMg 1013 (1067)
...+.++++++|++++++++ |||+.+ | +++=+.+|..++.-
T Consensus 205 p~~~~~a~~~~~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i~v 245 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVV-VEDSVI-G-LQAAKAAGMRCIVT 245 (286)
T ss_pred HHHHHHHHHHhCcChHHEEE-EeCCHH-h-HHHHHHcCCEEEEE
Confidence 56889999999999999999 999999 9 99999999766544
No 376
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=49.51 E-value=16 Score=38.77 Aligned_cols=53 Identities=11% Similarity=0.204 Sum_probs=44.1
Q ss_pred eEEEecCCCCHHHHHHHHHHHh---CCCcccEEEEecCCCCCChhhhhcCCceEEEeC
Q 001492 959 RMQIVPLLASRSQALRYLFVRW---RLNVANMFVILGESGDTDYEELISGAHKTLIMK 1013 (1067)
Q Consensus 959 ~lEI~p~gasKg~AL~~L~~~~---gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMg 1013 (1067)
.-..-|.+.=||.-|..+.... |+.-+.++- +||+.| ||-+|+.....-|||.
T Consensus 154 sC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iY-vGDG~n-D~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 154 SCNLCPSNMCKGLVLDELVASQLKDGVRYERLIY-VGDGAN-DFCPVLRLRACDVAMP 209 (256)
T ss_pred ccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEE-EcCCCC-CcCcchhcccCceecc
Confidence 3355788889999998885543 788888888 999999 9999999988888885
No 377
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=49.00 E-value=20 Score=38.11 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCC
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA 1006 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~a 1006 (1067)
-|+.-++-+++--++|.+ .++ +|||-+ | .+||+.+
T Consensus 191 ~ka~i~e~~~ele~~d~s-a~~-VGDSIt-D-v~ml~~~ 225 (315)
T COG4030 191 EKAKIMEGYCELEGIDFS-AVV-VGDSIT-D-VKMLEAA 225 (315)
T ss_pred chhHHHHHHHhhcCCCcc-eeE-ecCccc-c-hHHHHHh
Confidence 477777888888888877 667 999999 9 9999965
No 378
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=48.78 E-value=18 Score=37.92 Aligned_cols=36 Identities=25% Similarity=0.253 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEEEECCCCHH-------HHHHHHHhc
Q 001492 796 IQIMYDVFKAVRLDHQTARVTGFALSTAMPVS-------ETIEFLNSM 836 (1067)
Q Consensus 796 ~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~-------~~~~~l~~l 836 (1067)
.+...++|++|.+.| . .++++|+|+.. ...+|+++.
T Consensus 75 ~~gA~e~l~~L~~~g----~-~~~~Itar~~~~~~~~~~~k~~Wl~~h 117 (191)
T PF06941_consen 75 IPGAVEALKKLRDKG----H-EIVIITARPPEFPDHSAEEKREWLERH 117 (191)
T ss_dssp -TTHHHHHHHHHTST----T-EEEEEEE-SSSSGCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcC----C-cEEEEEecCccccchHHHHHHHHHHHH
Confidence 355678888888875 2 35566666543 456778775
No 379
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=48.20 E-value=20 Score=37.70 Aligned_cols=47 Identities=23% Similarity=0.309 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+||.+...+...++.+++. ..||.+++.
T Consensus 78 ~g~~~~L~~L~~~g----~-~~~i~Sn~~~~~~~~~l~~~~l~-~~f~~i~~~ 124 (205)
T TIGR01454 78 PGVPELLAELRADG----V-GTAIATGKSGPRARSLLEALGLL-PLFDHVIGS 124 (205)
T ss_pred CCHHHHHHHHHHCC----C-eEEEEeCCchHHHHHHHHHcCCh-hheeeEEec
Confidence 56779999999987 7 89999999999999999998884 235666654
No 380
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=48.13 E-value=12 Score=44.31 Aligned_cols=55 Identities=11% Similarity=0.158 Sum_probs=40.2
Q ss_pred EEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcccchhhhhccc
Q 001492 961 QIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEKGSEELLRTT 1027 (1067)
Q Consensus 961 EI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~~~~~~~~a~ 1027 (1067)
|..|. .|-..|+.-.. ....++..||+.| | .+-|..+..|+||-++... .|..++
T Consensus 492 eatPE--dK~~~I~~eQ~-----~grlVAMtGDGTN-D-APALAqAdVg~AMNsGTqA---AkEAaN 546 (681)
T COG2216 492 EATPE--DKLALIRQEQA-----EGRLVAMTGDGTN-D-APALAQADVGVAMNSGTQA---AKEAAN 546 (681)
T ss_pred cCChH--HHHHHHHHHHh-----cCcEEEEcCCCCC-c-chhhhhcchhhhhccccHH---HHHhhc
Confidence 44443 46666665443 3457888999999 9 9999999999999999943 444554
No 381
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=48.04 E-value=21 Score=37.95 Aligned_cols=49 Identities=18% Similarity=0.397 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCC-CCCCEEEEc
Q 001492 796 IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEA-NEFDALICS 849 (1067)
Q Consensus 796 ~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~-~~~d~~I~~ 849 (1067)
.+.+.++|+.|+++| + .++|+|+.....+...++.+++.. ..|+.++|+
T Consensus 89 ~~G~~~~L~~L~~~g----~-~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~ 138 (220)
T TIGR03351 89 LPGAEEAFRSLRSSG----I-KVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCP 138 (220)
T ss_pred CCCHHHHHHHHHHCC----C-EEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcC
Confidence 356789999999987 7 899999999999999999988741 237777775
No 382
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=47.71 E-value=50 Score=42.15 Aligned_cols=50 Identities=8% Similarity=0.201 Sum_probs=41.9
Q ss_pred eEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCcc
Q 001492 959 RMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVE 1017 (1067)
Q Consensus 959 ~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e 1017 (1067)
+-|++|. .|..=++.|.+.- ..+|.+||+-| | -+-|..+..||+||+..+
T Consensus 766 ~aev~P~--~K~~~Ik~lq~~~-----~~VaMVGDGIN-D-aPALA~AdVGIaig~gs~ 815 (951)
T KOG0207|consen 766 YAEVLPE--QKAEKIKEIQKNG-----GPVAMVGDGIN-D-APALAQADVGIAIGAGSD 815 (951)
T ss_pred EeccCch--hhHHHHHHHHhcC-----CcEEEEeCCCC-c-cHHHHhhccceeeccccH
Confidence 5678884 6999999887753 35666999999 9 999999999999999973
No 383
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=47.32 E-value=1.1e+02 Score=34.88 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=58.1
Q ss_pred CCCCcEE-EEEeC-CCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEE
Q 001492 477 NPHKPMI-LALSR-PDPKKNIT--TLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVA 552 (1067)
Q Consensus 477 ~~~~~~I-l~vgR-ld~~Kgi~--~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~ 552 (1067)
.+++++| +..|. ..+.|.+. ...+.+..+.+ .... .+++|+..+.+. ..+|. .... ...+.
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~-ivl~G~~~e~~~--------~~~i~---~~~~-~~~~~ 235 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQ-VVLFGSAKDHPA--------GNEIE---ALLP-GELRN 235 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCE-EEEEEChhhHHH--------HHHHH---HhCC-ccccc
Confidence 3345554 55544 34566554 56666655532 2222 245666543221 22222 2221 12344
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 001492 553 YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 553 ~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~ 603 (1067)
+.|..+-.++.++++.| |++|-. ++ | .+-=|.|.|+|+|+=.
T Consensus 236 l~g~~sL~el~ali~~a----~l~I~~---DS-G-p~HlAaA~~~P~i~lf 277 (334)
T TIGR02195 236 LAGETSLDEAVDLIALA----KAVVTN---DS-G-LMHVAAALNRPLVALY 277 (334)
T ss_pred CCCCCCHHHHHHHHHhC----CEEEee---CC-H-HHHHHHHcCCCEEEEE
Confidence 77888888999999999 998865 22 2 3334678999999843
No 384
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=46.95 E-value=1.1e+02 Score=33.96 Aligned_cols=86 Identities=12% Similarity=0.030 Sum_probs=51.6
Q ss_pred HHHhcCCCC--cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCC--CCCHHHHHHHHcCCCEEEcCCCCchhhhccCCc
Q 001492 541 LIDKYDLYG--QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVE--PFGLTLIEAAAHGLPMVATKNGGPVDIHRALNN 616 (1067)
Q Consensus 541 l~~~~~l~~--~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~E--gfgltllEAmA~G~PVVat~~Gg~~eiv~~~~~ 616 (1067)
.+.++|+.+ .+..-|..+.+.=.++++.. ..|++|.=-.-+ |+--++--|..+|+|||.=..+.... .
T Consensus 166 ~~~~~G~~~~~iia~~gPfs~e~n~al~~~~--~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~------~ 237 (256)
T TIGR00715 166 QALKLGFPSDRIIAMRGPFSEELEKALLREY--RIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP------G 237 (256)
T ss_pred HHHHcCCChhcEEEEeCCCCHHHHHHHHHHc--CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC------C
Confidence 455555533 45667777766667777765 225555322222 44456777788899999987764211 1
Q ss_pred eEEeCCCCHHHHHHHHHHhh
Q 001492 617 GLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 617 Gllv~p~d~~~la~aL~~ll 636 (1067)
...| .+.+++.+.+.+++
T Consensus 238 ~~~~--~~~~el~~~l~~~~ 255 (256)
T TIGR00715 238 VAIF--DDISQLNQFVARLL 255 (256)
T ss_pred CccC--CCHHHHHHHHHHhc
Confidence 1233 47888888777654
No 385
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=46.82 E-value=66 Score=35.67 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=57.5
Q ss_pred EEEEEeCCCCCC--CHHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCC
Q 001492 482 MILALSRPDPKK--NITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQ 559 (1067)
Q Consensus 482 ~Il~vgRld~~K--gi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~ 559 (1067)
+++..|.-.+.| ..+...+.+..+.. ....+ +++|+.++. .....+.+.++-...+.+.+..+-
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~--~~~~i-vl~g~~~e~-----------~~~~~i~~~~~~~~~~~~~~~~~l 189 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLA--RGARV-VLTGGPAER-----------ELAEEIAAALGGPRVVNLAGKTSL 189 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHH--CCCEE-EEEechhhH-----------HHHHHHHHhcCCCccccCcCCCCH
Confidence 444444444444 34577777777743 22223 355654432 112223333322234556777777
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC
Q 001492 560 YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604 (1067)
Q Consensus 560 ~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~ 604 (1067)
.++..+++.| |++|-+ ++ |..-+ |.|.|+|+|+=-.
T Consensus 190 ~e~~~li~~~----~l~I~~---Ds-g~~Hl-A~a~~~p~i~l~g 225 (279)
T cd03789 190 RELAALLARA----DLVVTN---DS-GPMHL-AAALGTPTVALFG 225 (279)
T ss_pred HHHHHHHHhC----CEEEee---CC-HHHHH-HHHcCCCEEEEEC
Confidence 8999999999 999976 22 44434 4699999998543
No 386
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=45.57 E-value=26 Score=42.66 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeC
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMK 1013 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMg 1013 (1067)
.|..-++.+... | ..++. +||+-| | ..||+.++.||+|+
T Consensus 394 ~K~~~v~~l~~~-g---~~v~~-vGDg~n-D-~~al~~Advgia~~ 432 (499)
T TIGR01494 394 EKAALVEALQKK-G---RVVAM-TGDGVN-D-APALKKADVGIAMG 432 (499)
T ss_pred HHHHHHHHHHHC-C---CEEEE-ECCChh-h-HHHHHhCCCccccc
Confidence 466666665432 3 33444 999999 9 99999999999998
No 387
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=44.88 E-value=32 Score=37.62 Aligned_cols=41 Identities=10% Similarity=0.077 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
-+...+.+.++++|++++++++ |||+.. | +..=+.+|.-++
T Consensus 165 P~p~~~~~a~~~~~~~~~~~l~-vgDs~~-D-i~aA~~aGi~~i 205 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKDHTFV-FEDSVS-G-IKAGVAAGMPVV 205 (248)
T ss_pred CChHHHHHHHHHhCCChhHEEE-EcCCHH-H-HHHHHHCCCEEE
Confidence 3557889999999999999999 999999 9 888888886544
No 388
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=44.80 E-value=23 Score=37.58 Aligned_cols=47 Identities=21% Similarity=0.198 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+|+.+...+...++.+++. .-||.++|+
T Consensus 97 ~g~~~~L~~L~~~g----~-~~~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 143 (221)
T TIGR02253 97 PGVRDTLMELRESG----Y-RLGIITDGLPVKQWEKLERLGVR-DFFDAVITS 143 (221)
T ss_pred CCHHHHHHHHHHCC----C-EEEEEeCCchHHHHHHHHhCChH-HhccEEEEe
Confidence 56779999999886 7 79999999888888999998875 247777764
No 389
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=44.68 E-value=23 Score=35.41 Aligned_cols=47 Identities=11% Similarity=0.258 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|++|+++| + .++++|+.+...+...++.+++. ..|+.++++
T Consensus 80 ~~~~~~L~~l~~~~----~-~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~ 126 (176)
T PF13419_consen 80 PGVRELLERLKAKG----I-PLVIVSNGSRERIERVLERLGLD-DYFDEIISS 126 (176)
T ss_dssp TTHHHHHHHHHHTT----S-EEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEG
T ss_pred hhhhhhhhhccccc----c-eeEEeecCCcccccccccccccc-ccccccccc
Confidence 56778999998886 7 89999999999999999998875 247777765
No 390
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=44.14 E-value=30 Score=38.24 Aligned_cols=47 Identities=11% Similarity=0.206 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+|+.+...+...++.+++. ..|+.++++
T Consensus 112 pg~~e~L~~L~~~g----~-~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~ii~~ 158 (260)
T PLN03243 112 PGSREFVQALKKHE----I-PIAVASTRPRRYLERAIEAVGME-GFFSVVLAA 158 (260)
T ss_pred CCHHHHHHHHHHCC----C-EEEEEeCcCHHHHHHHHHHcCCH-hhCcEEEec
Confidence 56779999999887 7 89999999999999999998875 347888775
No 391
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=43.75 E-value=29 Score=37.06 Aligned_cols=47 Identities=17% Similarity=0.277 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+|+.+...+..+++.+++. ..|+.++|+
T Consensus 95 ~g~~~~l~~l~~~g----~-~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 141 (222)
T PRK10826 95 PGVREALALCKAQG----L-KIGLASASPLHMLEAVLTMFDLR-DYFDALASA 141 (222)
T ss_pred CCHHHHHHHHHHCC----C-eEEEEeCCcHHHHHHHHHhCcch-hcccEEEEc
Confidence 66779999999987 7 89999999999999999998875 347776665
No 392
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=43.68 E-value=53 Score=35.32 Aligned_cols=45 Identities=7% Similarity=-0.067 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceE--EEeCCCc
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKT--LIMKGVV 1016 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~g--VaMgNA~ 1016 (1067)
+.....++++++|++++++++ |||+.+ | +..=+.+|.. +++.|..
T Consensus 151 ~p~~~~~~~~~~~~~p~~~l~-igDs~~-d-i~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAERTLF-IDDSEP-I-LDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred CHHHHHHHHHHcCCChHHEEE-EcCCHH-H-HHHHHHcCCeEEEEEeCCC
Confidence 367899999999999999999 999999 9 8888888885 4456644
No 393
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=43.40 E-value=16 Score=36.68 Aligned_cols=41 Identities=20% Similarity=0.244 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
.+....+.+++++|+++++++. |||+.. | +.+=+.+|...+
T Consensus 134 p~~~~~~~~~~~~~~~p~~~~~-vgD~~~-d-~~~A~~~G~~~i 174 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPEEILF-VGDSPS-D-VEAAKEAGIKTI 174 (176)
T ss_dssp TSHHHHHHHHHHHTSSGGGEEE-EESSHH-H-HHHHHHTTSEEE
T ss_pred hHHHHHHHHHHHcCCCcceEEE-EeCCHH-H-HHHHHHcCCeEE
Confidence 4568999999999999999988 999998 9 998888886544
No 394
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=43.13 E-value=29 Score=37.92 Aligned_cols=47 Identities=9% Similarity=0.001 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCC-CEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEF-DALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~-d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+||.+...+..+++.+++.. -| |.+||+
T Consensus 102 pg~~e~L~~L~~~g----~-~l~IvT~~~~~~~~~~l~~~gl~~-~f~d~ii~~ 149 (253)
T TIGR01422 102 PGVIEVIAYLRARG----I-KIGSTTGYTREMMDVVAPEAALQG-YRPDYNVTT 149 (253)
T ss_pred CCHHHHHHHHHHCC----C-eEEEECCCcHHHHHHHHHHHHhcC-CCCceEEcc
Confidence 45668899999887 7 899999999999999999887742 22 556653
No 395
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=43.09 E-value=26 Score=36.11 Aligned_cols=40 Identities=8% Similarity=0.038 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
+.....++++++|++++++++ |||+.. | +..=+.+|..++
T Consensus 143 ~p~~~~~~~~~~~~~~~~~l~-vgD~~~-d-i~aA~~~G~~~i 182 (184)
T TIGR01993 143 SPQAYEKALREAGVDPERAIF-FDDSAR-N-IAAAKALGMKTV 182 (184)
T ss_pred CHHHHHHHHHHhCCCccceEE-EeCCHH-H-HHHHHHcCCEEe
Confidence 457889999999999999998 999988 8 877777776554
No 396
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=42.61 E-value=33 Score=34.29 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=28.3
Q ss_pred HHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE
Q 001492 973 LRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL 1010 (1067)
Q Consensus 973 L~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV 1010 (1067)
+.+.++++|++++++++ |||+.+ | ..+-..+|+-|
T Consensus 104 ~~k~l~~l~~~p~~~i~-i~Ds~~-~-~~aa~~ngI~i 138 (148)
T smart00577 104 YVKDLSLLGRDLSNVII-IDDSPD-S-WPFHPENLIPI 138 (148)
T ss_pred EeecHHHcCCChhcEEE-EECCHH-H-hhcCccCEEEe
Confidence 66667889999999999 999999 8 77766665544
No 397
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=42.03 E-value=32 Score=40.21 Aligned_cols=47 Identities=13% Similarity=0.165 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.++++|+.|+++| + .++|+|+.+...+..+++.+|+. ..||.+|+.
T Consensus 219 pGa~ElL~~Lk~~G----i-klaIaSn~~~~~~~~~L~~lgL~-~yFd~Iv~s 265 (381)
T PLN02575 219 TGSQEFVNVLMNYK----I-PMALVSTRPRKTLENAIGSIGIR-GFFSVIVAA 265 (381)
T ss_pred cCHHHHHHHHHHCC----C-eEEEEeCCCHHHHHHHHHHcCCH-HHceEEEec
Confidence 55678999999887 7 89999999999999999998885 347877774
No 398
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=41.31 E-value=37 Score=35.47 Aligned_cols=47 Identities=11% Similarity=0.164 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|++|+++| + .++|+|+-+...+...++.+|+. ..||.++++
T Consensus 95 ~~~~~~L~~L~~~g----~-~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s 141 (198)
T TIGR01428 95 PDVPAGLRALKERG----Y-RLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSA 141 (198)
T ss_pred CCHHHHHHHHHHCC----C-eEEEEeCCCHHHHHHHHHHCCCh-hhhheeEeh
Confidence 45668899999886 7 89999999999999999998874 236766664
No 399
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=40.54 E-value=23 Score=43.00 Aligned_cols=43 Identities=12% Similarity=0.221 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCC
Q 001492 965 LLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014 (1067)
Q Consensus 965 ~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgN 1014 (1067)
.|-.|..+|+ +.+|.+... ++ .||+.+ | .+||+.++..+++..
T Consensus 173 ~Ge~Kv~rl~---~~~g~~~~~-~a-YgDS~s-D-~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVL---KEFGDALPD-LG-LGDRET-D-HDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHH---HHhCCCCce-EE-EECCcc-H-HHHHHhCCccEEeCC
Confidence 3445888887 556766655 66 999999 9 999999999999988
No 400
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=39.72 E-value=21 Score=36.66 Aligned_cols=39 Identities=5% Similarity=-0.061 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL 1010 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV 1010 (1067)
+...+.++++++|++++++++ |||+.+ | +++=+.+|...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~-IgD~~~-d-i~aA~~~G~~~ 182 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVV-FEDALA-G-VQAARAAGMFA 182 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEE-EeCcHh-h-HHHHHHCCCeE
Confidence 445788999999999999999 999999 9 98888887654
No 401
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=39.65 E-value=43 Score=35.59 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+...++|+.+++.| + .++|+||.....+..+++.+++. ..|+.+++.
T Consensus 96 ~g~~~~l~~l~~~g----~-~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 142 (226)
T PRK13222 96 PGVKETLAALKAAG----Y-PLAVVTNKPTPFVAPLLEALGIA-DYFSVVIGG 142 (226)
T ss_pred CCHHHHHHHHHHCC----C-eEEEEeCCCHHHHHHHHHHcCCc-cCccEEEcC
Confidence 66779999999886 6 79999999999999999998874 235655543
No 402
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=39.29 E-value=3.8e+02 Score=30.21 Aligned_cols=133 Identities=11% Similarity=-0.032 Sum_probs=69.4
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 479 HKPMILALSRPDPKKNIT--TLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 479 ~~~~Il~vgRld~~Kgi~--~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
++.++++.|.=.+.|.++ ...+.+..+.+ ....+ +++|++++.. +..+.+ .+..+ ...+.|.
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~--~~~~~-vl~~g~~~e~-------~~~~~i---~~~~~---~~~l~g~ 242 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLA--RGLQI-VLPWGNDAEK-------QRAERI---AEALP---GAVVLPK 242 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHH--CCCeE-EEeCCCHHHH-------HHHHHH---HhhCC---CCeecCC
Confidence 344566776545666653 56666666632 22233 3443333211 112222 22222 2356688
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCCCCchhhh-ccCCc-eEEe----CCCCHHHHHH
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIH-RALNN-GLLV----DPHDQQAIAD 630 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~Gg~~eiv-~~~~~-Gllv----~p~d~~~la~ 630 (1067)
.+-.++.++++.| +++|-. ++. .+-=|.|.|+|+|+=..+...... .-+.+ .++. +--+++++.+
T Consensus 243 ~sL~el~ali~~a----~l~I~~---DSg--p~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~~~~~~~I~~~~V~~ 313 (319)
T TIGR02193 243 MSLAEVAALLAGA----DAVVGV---DTG--LTHLAAALDKPTVTLYGATDPGRTGGYGKPNVALLGESGANPTPDEVLA 313 (319)
T ss_pred CCHHHHHHHHHcC----CEEEeC---CCh--HHHHHHHcCCCEEEEECCCCHhhcccCCCCceEEccCccCCCCHHHHHH
Confidence 7888999999999 998865 332 333467889999985432221111 01111 1222 2235677777
Q ss_pred HHHHhh
Q 001492 631 ALLKLV 636 (1067)
Q Consensus 631 aL~~ll 636 (1067)
++.++|
T Consensus 314 ai~~~~ 319 (319)
T TIGR02193 314 ALEELL 319 (319)
T ss_pred HHHhhC
Confidence 776654
No 403
>PRK11587 putative phosphatase; Provisional
Probab=39.22 E-value=31 Score=36.77 Aligned_cols=45 Identities=9% Similarity=-0.097 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCce-EEEeCCCc
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHK-TLIMKGVV 1016 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~-gVaMgNA~ 1016 (1067)
+.......++++|++++++++ |||+.+ | +..=+.+|. +|++.+..
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~-igDs~~-d-i~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVV-VEDAPA-G-VLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEE-Eecchh-h-hHHHHHCCCEEEEECCCC
Confidence 456778888999999999999 999999 9 888888886 56665543
No 404
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=39.06 E-value=23 Score=36.97 Aligned_cols=43 Identities=5% Similarity=-0.119 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCC
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKG 1014 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgN 1014 (1067)
+....+++++++|+++++++. |||+.+ | +..=+.+|...+.=|
T Consensus 150 ~~~~~~~~~~~~~~~p~~~~~-vgD~~~-D-i~~A~~~G~~~i~v~ 192 (198)
T TIGR01428 150 APQVYQLALEALGVPPDEVLF-VASNPW-D-LGGAKKFGFKTAWVN 192 (198)
T ss_pred CHHHHHHHHHHhCCChhhEEE-EeCCHH-H-HHHHHHCCCcEEEec
Confidence 467889999999999999998 999998 9 988888887655433
No 405
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=38.88 E-value=2.5e+02 Score=31.76 Aligned_cols=47 Identities=13% Similarity=-0.033 Sum_probs=35.3
Q ss_pred CcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC
Q 001492 549 GQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN 604 (1067)
Q Consensus 549 ~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~ 604 (1067)
+.+.+.|..+-.++.++++.| |++|-. ++ -.+-=|.|+|+|+|+=--
T Consensus 234 ~~~~l~g~~sL~elaali~~a----~l~I~n---DS--Gp~HlA~A~g~p~valfG 280 (322)
T PRK10964 234 PYVEVLPKLSLEQVARVLAGA----KAVVSV---DT--GLSHLTAALDRPNITLYG 280 (322)
T ss_pred CcceecCCCCHHHHHHHHHhC----CEEEec---CC--cHHHHHHHhCCCEEEEEC
Confidence 346677888888999999999 999865 22 234447889999999543
No 406
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=38.49 E-value=31 Score=35.15 Aligned_cols=39 Identities=10% Similarity=0.080 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 970 SQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 970 g~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
....+.+++++|++++++++ |||+.. | +.+=+.+|...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~-vgD~~~-d-i~aA~~~G~~~i 181 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLF-VDDSPA-G-IEAAKAAGMHTV 181 (183)
T ss_pred HHHHHHHHHHcCCCcceEEE-EcCCHH-H-HHHHHHcCCEEE
Confidence 67889999999999999999 999998 9 888888887543
No 407
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=38.45 E-value=5.5e+02 Score=28.46 Aligned_cols=126 Identities=13% Similarity=0.087 Sum_probs=79.7
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE--EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEe---CCCCCCCCHHHH
Q 001492 491 PKKNITTLLKAFGECRPLRELANLTL--IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAY---PKHHKQYDVPEI 565 (1067)
Q Consensus 491 ~~Kgi~~ll~A~~~l~~l~~~~~l~l--IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~---~g~~~~~dl~~l 565 (1067)
+.+.++.+.++++..+... -.+.+ ....+. ..+++.++.+.+.+.+.. .+.+ .|...++++..+
T Consensus 104 ~~~~~~~~~~~i~~ak~~G--~~v~~~~~~a~~~--------~~~~~~~~~~~~~~~g~~-~i~l~DT~G~~~P~~v~~l 172 (266)
T cd07944 104 HKHEFDEALPLIKAIKEKG--YEVFFNLMAISGY--------SDEELLELLELVNEIKPD-VFYIVDSFGSMYPEDIKRI 172 (266)
T ss_pred ccccHHHHHHHHHHHHHCC--CeEEEEEEeecCC--------CHHHHHHHHHHHHhCCCC-EEEEecCCCCCCHHHHHHH
Confidence 4567888888888875422 12222 222222 234455666666666643 5655 577778888888
Q ss_pred HHHhhcCCc--EEEecCCCCCCCHH---HHHHHHcCCCEEEcCCCCchhhhccCCceEEeCCCCHHHHHHHHHHhh
Q 001492 566 YRLAAKTKG--VFINPALVEPFGLT---LIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 566 y~~A~~~~d--V~v~ps~~Egfglt---llEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aL~~ll 636 (1067)
++......+ +-|--..+..+|+. .++|+.+|+=+|-+..+|..+- .|-. ..++++..|....
T Consensus 173 v~~l~~~~~~~~~i~~H~Hn~~Gla~AN~laA~~aGa~~vd~s~~G~G~~-----aGN~----~~E~~v~~l~~~~ 239 (266)
T cd07944 173 ISLLRSNLDKDIKLGFHAHNNLQLALANTLEAIELGVEIIDATVYGMGRG-----AGNL----PTELLLDYLNNKF 239 (266)
T ss_pred HHHHHHhcCCCceEEEEeCCCccHHHHHHHHHHHcCCCEEEEecccCCCC-----cCcH----HHHHHHHHHHHhh
Confidence 887643323 44444456777875 4888999999999998887762 2221 4677888877653
No 408
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=37.92 E-value=25 Score=39.45 Aligned_cols=28 Identities=18% Similarity=0.279 Sum_probs=19.0
Q ss_pred eEEEEEEeCCCCCCCCc-hhhHHHHHHHHHH
Q 001492 776 RLIVIALDCYDSKGAPD-KKMIQIMYDVFKA 805 (1067)
Q Consensus 776 klllia~DiDGTLl~~~-~~i~~~~~~al~~ 805 (1067)
++++| |+||||.++. .-......++++.
T Consensus 41 k~VIF--DlDGTLvDS~~~~~~~a~~~~l~~ 69 (286)
T PLN02779 41 EALLF--DCDGVLVETERDGHRVAFNDAFKE 69 (286)
T ss_pred cEEEE--eCceeEEccccHHHHHHHHHHHHH
Confidence 55555 9999999886 5555555555543
No 409
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=37.65 E-value=35 Score=34.98 Aligned_cols=45 Identities=13% Similarity=0.284 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+|+. ..+...++.+++. ..|+.++++
T Consensus 91 ~g~~~~l~~l~~~g----~-~i~i~S~~--~~~~~~l~~~~l~-~~f~~v~~~ 135 (185)
T TIGR02009 91 PGIENFLKRLKKKG----I-AVGLGSSS--KNADRILAKLGLT-DYFDAIVDA 135 (185)
T ss_pred cCHHHHHHHHHHcC----C-eEEEEeCc--hhHHHHHHHcChH-HHCCEeeeh
Confidence 56778999999886 7 79999998 6678889988874 236777664
No 410
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=37.00 E-value=37 Score=35.92 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=29.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVS 221 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~ 221 (1067)
|||++....|+ ....+..|+++|.+.| |+|.|+++...
T Consensus 1 M~ILlTNDDGi----------------~a~Gi~aL~~~L~~~g--~~V~VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGI----------------DAPGIRALAKALSALG--HDVVVVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-T----------------TSHHHHHHHHHHTTTS--SEEEEEEESSS
T ss_pred CeEEEEcCCCC----------------CCHHHHHHHHHHHhcC--CeEEEEeCCCC
Confidence 89999987765 2356788999998888 99999998654
No 411
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=36.60 E-value=81 Score=34.37 Aligned_cols=49 Identities=6% Similarity=0.095 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+..+++++.+.++. ..+ .++|.|-=.-..+..+|+..|+. .-|+-++++
T Consensus 74 pgm~~~l~~l~~~~--~~~-~~~IiSDaNs~fI~~iL~~~gl~-~~f~~I~TN 122 (234)
T PF06888_consen 74 PGMKELLRFLAKNQ--RGF-DLIIISDANSFFIETILEHHGLR-DCFSEIFTN 122 (234)
T ss_pred ccHHHHHHHHHhcC--CCc-eEEEEeCCcHhHHHHHHHhCCCc-cccceEEeC
Confidence 34455666663321 125 67777777777888888888875 234555554
No 412
>PRK06769 hypothetical protein; Validated
Probab=35.89 E-value=22 Score=36.59 Aligned_cols=42 Identities=17% Similarity=0.144 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeC
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMK 1013 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMg 1013 (1067)
+..-+.+.++++|++++++++ |||+.+ | +..=+.+|..++.-
T Consensus 95 ~p~~~~~~~~~l~~~p~~~i~-IGD~~~-D-i~aA~~aGi~~i~v 136 (173)
T PRK06769 95 STGMLLQAAEKHGLDLTQCAV-IGDRWT-D-IVAAAKVNATTILV 136 (173)
T ss_pred CHHHHHHHHHHcCCCHHHeEE-EcCCHH-H-HHHHHHCCCeEEEE
Confidence 456788889999999999999 999998 9 88888888655433
No 413
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=35.67 E-value=45 Score=37.23 Aligned_cols=46 Identities=11% Similarity=0.182 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEE
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALIC 848 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~ 848 (1067)
+.+.++|+.|+++| + .++|+|+.....+...++.+|+. ..|+.+++
T Consensus 145 pg~~e~L~~L~~~g----i-~laIvSn~~~~~~~~~L~~~gl~-~~F~~vi~ 190 (273)
T PRK13225 145 PGVADLLAQLRSRS----L-CLGILSSNSRQNIEAFLQRQGLR-SLFSVVQA 190 (273)
T ss_pred CCHHHHHHHHHHCC----C-eEEEEeCCCHHHHHHHHHHcCCh-hheEEEEe
Confidence 56779999999887 7 89999999999999999998885 24555544
No 414
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=35.46 E-value=27 Score=39.05 Aligned_cols=63 Identities=11% Similarity=0.073 Sum_probs=38.8
Q ss_pred eEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEEC-CCCH-HH--HHHHHHhcCCCC
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALST-AMPV-SE--TIEFLNSMKIEA 840 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaT-GR~~-~~--~~~~l~~l~i~~ 840 (1067)
.-+-||+||||.|..- +.+.+...++++.|.++...=+| .|++.| |=.. +. +.++-..|++.+
T Consensus 34 ~~fgfafDIDGVL~RG-~~~i~~~~~Alr~L~~~~g~lkI-P~vfLTNGGg~~E~~rA~~lS~~Lgv~V 100 (389)
T KOG1618|consen 34 PTFGFAFDIDGVLFRG-HRPIPGALKALRRLVDNQGQLKI-PFVFLTNGGGILESSRAQELSALLGVEV 100 (389)
T ss_pred CceeEEEecccEEEec-CCCCcchHHHHHHHHhcCCCeec-cEEEEeCCCCcchhhHHHHHHHhhCCcc
Confidence 3457888999996554 45667778999999887422246 566655 3322 22 344555566653
No 415
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=35.38 E-value=25 Score=34.94 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCC
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGA 1006 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~a 1006 (1067)
.+...+.++++++|+++ +++. +||+.. | +.+=+.+
T Consensus 119 p~~~~~~~~~~~~~~~~-~~l~-iGDs~~-D-i~aa~~a 153 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP-EVLH-VGDNLN-D-IEGARNA 153 (154)
T ss_pred cCHHHHHHHHHHcCCCC-CEEE-EeCCHH-H-HHHHHHc
Confidence 36789999999999998 8888 999988 8 6654443
No 416
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=35.29 E-value=49 Score=41.02 Aligned_cols=56 Identities=9% Similarity=0.087 Sum_probs=43.8
Q ss_pred eEEEEEEeCCCCCC---CCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCC
Q 001492 776 RLIVIALDCYDSKG---APDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKI 838 (1067)
Q Consensus 776 klllia~DiDGTLl---~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i 838 (1067)
..+++ +.||++. .-...+-+..+++|++|++.| + .++++||.+...+..+++.+|+
T Consensus 386 ~~~~~--~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~G----i-~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 386 TSVLV--AVNGELAGVFALEDQLRPEAKEVIQALKRRG----I-EPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred EEEEE--EECCEEEEEEEecccccHHHHHHHHHHHHcC----C-eEEEEcCCCHHHHHHHHHHcCC
Confidence 44444 6667621 113457789999999999997 7 8999999999999999999887
No 417
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=35.06 E-value=26 Score=43.88 Aligned_cols=44 Identities=14% Similarity=0.191 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCccc
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVVEK 1018 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~e~ 1018 (1067)
.|---|..| +++|.- ++. +||+.| | ..-|+.|+.|||+=|+.+.
T Consensus 794 QKE~ii~tl-K~~Gy~---TLM-CGDGTN-D-VGALK~AhVGVALL~~~~e 837 (1160)
T KOG0209|consen 794 QKEFIITTL-KKLGYV---TLM-CGDGTN-D-VGALKQAHVGVALLNNPEE 837 (1160)
T ss_pred hHHHHHHHH-HhcCeE---EEE-ecCCCc-c-hhhhhhcccceehhcCChh
Confidence 465555554 446665 777 999999 9 9999999999999998863
No 418
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=34.91 E-value=28 Score=37.03 Aligned_cols=44 Identities=11% Similarity=0.016 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCC
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGV 1015 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA 1015 (1067)
+...+...++++|++++++++ |||+.+ | ++.=+.+|..++.-+.
T Consensus 144 ~p~~~~~a~~~~~~~p~~~l~-igDs~~-d-i~aA~~aG~~~i~~~~ 187 (221)
T PRK10563 144 DPALMFHAAEAMNVNVENCIL-VDDSSA-G-AQSGIAAGMEVFYFCA 187 (221)
T ss_pred ChHHHHHHHHHcCCCHHHeEE-EeCcHh-h-HHHHHHCCCEEEEECC
Confidence 578899999999999999999 999999 9 9888889988875543
No 419
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=34.57 E-value=59 Score=35.00 Aligned_cols=47 Identities=13% Similarity=0.094 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+|+.+...+...++.+++. ..|+.+++.
T Consensus 98 pg~~~~L~~L~~~g----~-~l~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 144 (229)
T PRK13226 98 DGVEGMLQRLECAG----C-VWGIVTNKPEYLARLILPQLGWE-QRCAVLIGG 144 (229)
T ss_pred CCHHHHHHHHHHCC----C-eEEEECCCCHHHHHHHHHHcCch-hcccEEEec
Confidence 55668888999886 7 79999999998888899998874 346666654
No 420
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=34.54 E-value=55 Score=36.11 Aligned_cols=48 Identities=10% Similarity=0.068 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+||.+...+..+++.+++....+|.++|+
T Consensus 104 pg~~elL~~L~~~g----~-~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~ 151 (267)
T PRK13478 104 PGVLEVIAALRARG----I-KIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTT 151 (267)
T ss_pred CCHHHHHHHHHHCC----C-EEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcC
Confidence 45668899999887 7 899999999999988888866531113555543
No 421
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=34.31 E-value=44 Score=35.59 Aligned_cols=16 Identities=13% Similarity=0.295 Sum_probs=12.0
Q ss_pred eEEEEEEeCCCCCCCCch
Q 001492 776 RLIVIALDCYDSKGAPDK 793 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~ 793 (1067)
+.++| |+||||.+...
T Consensus 5 ~~viF--D~DGTL~d~~~ 20 (221)
T PRK10563 5 EAVFF--DCDGTLVDSEV 20 (221)
T ss_pred CEEEE--CCCCCCCCChH
Confidence 55555 99999998753
No 422
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=34.30 E-value=27 Score=35.91 Aligned_cols=43 Identities=14% Similarity=0.167 Sum_probs=30.5
Q ss_pred eEEEEEEeCCCCCCCCc--------hhhHHHHHHHHHHHHhcCCCCceeEEEEECCCC
Q 001492 776 RLIVIALDCYDSKGAPD--------KKMIQIMYDVFKAVRLDHQTARVTGFALSTAMP 825 (1067)
Q Consensus 776 klllia~DiDGTLl~~~--------~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~ 825 (1067)
|++|+ |.||||..+. -.+.+.+.++|++|+++| + .++|+|.-+
T Consensus 2 ~~~~~--D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G----~-~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFL--DRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMG----Y-ALVLVTNQS 52 (176)
T ss_pred CEEEE--eCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCC----C-EEEEEeCCc
Confidence 56666 9999966321 123467889999999887 6 788888654
No 423
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=33.96 E-value=69 Score=33.21 Aligned_cols=38 Identities=3% Similarity=0.021 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+.+.++|+.|+++| + .++|+||.....+..+++.+|+.
T Consensus 83 ~g~~e~l~~l~~~g----~-~~~IvS~~~~~~~~~~l~~~g~~ 120 (201)
T TIGR01491 83 DYAEELVRWLKEKG----L-KTAIVSGGIMCLAKKVAEKLNPD 120 (201)
T ss_pred ccHHHHHHHHHHCC----C-EEEEEeCCcHHHHHHHHHHhCCC
Confidence 56779999999887 7 89999999999999999998874
No 424
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=33.87 E-value=54 Score=33.35 Aligned_cols=46 Identities=22% Similarity=0.296 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|++|++.| + .++|+|+-+... ...+..+++. ..||.+|++
T Consensus 88 ~g~~~~l~~l~~~g----~-~~~i~Tn~~~~~-~~~~~~~~l~-~~f~~i~~~ 133 (183)
T TIGR01509 88 PGVEPLLEALRARG----K-KLALLTNSPRDH-AVLVQELGLR-DLFDVVIFS 133 (183)
T ss_pred cCHHHHHHHHHHCC----C-eEEEEeCCchHH-HHHHHhcCCH-HHCCEEEEc
Confidence 56779999999887 7 799999988877 5555557764 347888875
No 425
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=33.76 E-value=52 Score=36.58 Aligned_cols=47 Identities=28% Similarity=0.272 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+||.+...+...+..+++. ..|+.++|+
T Consensus 104 ~g~~e~L~~Lk~~g----~-~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~ 150 (272)
T PRK13223 104 PGVRDTLKWLKKQG----V-EMALITNKPERFVAPLLDQMKIG-RYFRWIIGG 150 (272)
T ss_pred CCHHHHHHHHHHCC----C-eEEEEECCcHHHHHHHHHHcCcH-hhCeEEEec
Confidence 56778999998886 7 79999999998899999998874 236666654
No 426
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=33.21 E-value=86 Score=35.17 Aligned_cols=69 Identities=12% Similarity=0.045 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC---CCCCCHHHHHHHHcCCCEEEcC
Q 001492 533 SVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPAL---VEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 533 ~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~---~EgfgltllEAmA~G~PVVat~ 603 (1067)
.....+.+.++++++. +....--+.+++...+.......|++++++. ...+...+..+..+++||++..
T Consensus 147 ~~~~~~~~~a~~~g~~--l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 147 AQIEQLRKAAKKLGIE--LVEIPVPSSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSS 218 (294)
T ss_dssp HHHHHHHHHHHHTT-E--EEEEEESSGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESS
T ss_pred HHHHHHHHHHHHcCCE--EEEEecCcHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECC
Confidence 3466777788888763 3322333467888888877677788887753 2333344455666799999976
No 427
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=32.88 E-value=33 Score=34.90 Aligned_cols=26 Identities=8% Similarity=0.102 Sum_probs=0.0
Q ss_pred EEEeCCCCCCCCchhhHHHHHHHHHH
Q 001492 780 IALDCYDSKGAPDKKMIQIMYDVFKA 805 (1067)
Q Consensus 780 ia~DiDGTLl~~~~~i~~~~~~al~~ 805 (1067)
+.+|+||||.+..........+++..
T Consensus 2 viFD~DGTL~D~~~~~~~~~~~~~~~ 27 (175)
T TIGR01493 2 MVFDVYGTLVDVHGGVRACLAAIAPE 27 (175)
T ss_pred eEEecCCcCcccHHHHHHHHHHhhhh
No 428
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=32.37 E-value=34 Score=35.21 Aligned_cols=27 Identities=7% Similarity=0.017 Sum_probs=18.0
Q ss_pred eEEEEEEeCCCCCCCCchhhHHHHHHHHH
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFK 804 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~~i~~~~~~al~ 804 (1067)
++++| |+||||.++.....+...++++
T Consensus 6 ~~viF--D~DGTLiDs~~~~~~a~~~~~~ 32 (188)
T PRK10725 6 AGLIF--DMDGTILDTEPTHRKAWREVLG 32 (188)
T ss_pred eEEEE--cCCCcCccCHHHHHHHHHHHHH
Confidence 44444 9999999886555555555543
No 429
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=32.28 E-value=59 Score=34.71 Aligned_cols=46 Identities=11% Similarity=0.183 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 795 MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 795 i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.+.++|+.++++| + .++|+||-....+..+++.+ +. .+.++|+
T Consensus 75 l~pG~~e~l~~l~~~g----~-~~~IvS~~~~~~i~~il~~~-~~---~~~i~~n 120 (219)
T PRK09552 75 IREGFHEFVQFVKENN----I-PFYVVSGGMDFFVYPLLQGL-IP---KEQIYCN 120 (219)
T ss_pred cCcCHHHHHHHHHHcC----C-eEEEECCCcHHHHHHHHHHh-CC---cCcEEEe
Confidence 3367789999999887 7 89999999999999999997 63 2445554
No 430
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=31.70 E-value=97 Score=33.40 Aligned_cols=42 Identities=7% Similarity=-0.046 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
.+.....++++++|+++++++. +||+.. | ++.=+.+|...+.
T Consensus 153 P~p~~y~~i~~~lgv~p~e~lf-VgDs~~-D-i~AA~~AG~~ti~ 194 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPREILF-LSDIIN-E-LDAARKAGLHTGQ 194 (220)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-EeCCHH-H-HHHHHHcCCEEEE
Confidence 3577889999999999999988 999999 9 8888888876544
No 431
>PRK08238 hypothetical protein; Validated
Probab=31.47 E-value=63 Score=39.12 Aligned_cols=45 Identities=16% Similarity=0.141 Sum_probs=34.0
Q ss_pred cCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEeCCCc
Q 001492 964 PLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIMKGVV 1016 (1067)
Q Consensus 964 p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaMgNA~ 1016 (1067)
.++..|...++ +.++ .++++. +||+.+ | ++|++.++..|+++...
T Consensus 124 ~kg~~K~~~l~---~~l~--~~~~~y-vGDS~~-D-lp~~~~A~~av~Vn~~~ 168 (479)
T PRK08238 124 LKGAAKAAALV---EAFG--ERGFDY-AGNSAA-D-LPVWAAARRAIVVGASP 168 (479)
T ss_pred cCCchHHHHHH---HHhC--ccCeeE-ecCCHH-H-HHHHHhCCCeEEECCCH
Confidence 34445766655 4444 345666 899999 9 99999999999998776
No 432
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=31.16 E-value=39 Score=36.89 Aligned_cols=44 Identities=16% Similarity=-0.053 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhCCC-cccEEEEecCCCCCChhhhhcCCce-EEEeCCC
Q 001492 969 RSQALRYLFVRWRLN-VANMFVILGESGDTDYEELISGAHK-TLIMKGV 1015 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~-~e~vva~fGDs~N~D~~eML~~ag~-gVaMgNA 1015 (1067)
+...+.+.++++|+. ++++++ |||+.+ | +..=+.+|. .|++..+
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~-IGDs~~-D-i~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVK-VGDTVP-D-IEEGRNAGMWTVGLILS 203 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEE-ECCcHH-H-HHHHHHCCCeEEEEecC
Confidence 456788899999995 999999 999999 9 888888884 4455444
No 433
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=31.00 E-value=3.5e+02 Score=29.69 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=28.2
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVS 221 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~ 221 (1067)
|||++....|. ....+..|+++|.+.| +|+|+++...
T Consensus 1 M~ILltNDDGi----------------~a~Gi~aL~~~l~~~g---~V~VvAP~~~ 37 (244)
T TIGR00087 1 MKILLTNDDGI----------------HSPGIRALYQALKELG---EVTVVAPARQ 37 (244)
T ss_pred CeEEEECCCCC----------------CCHhHHHHHHHHHhCC---CEEEEeCCCC
Confidence 78998886665 2346778999999886 7999988643
No 434
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=30.97 E-value=38 Score=35.47 Aligned_cols=38 Identities=13% Similarity=0.090 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCC-CCChhhhhcCCceEE
Q 001492 970 SQALRYLFVRWRLNVANMFVILGESG-DTDYEELISGAHKTL 1010 (1067)
Q Consensus 970 g~AL~~L~~~~gi~~e~vva~fGDs~-N~D~~eML~~ag~gV 1010 (1067)
....+++++++|+++++++. |||+. + | +..=+.+|...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~-IgD~~~~-D-i~~A~~aG~~~ 201 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALH-IGDSLRN-D-YQGARAAGWRA 201 (203)
T ss_pred HHHHHHHHHHcCCChhHEEE-ECCCchH-H-HHHHHHcCCee
Confidence 45689999999999999999 99997 7 8 87777777654
No 435
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=30.96 E-value=92 Score=32.44 Aligned_cols=41 Identities=10% Similarity=0.032 Sum_probs=35.0
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+.+...+.|+.++++| + .++|+||-.-..+..+++.++++
T Consensus 87 ~~~~~~~~~l~~l~~~g----~-~v~ivS~s~~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEG----H-TIVLVSASLTILVKPLARILGID 127 (202)
T ss_pred hccHHHHHHHHHHHHCC----C-EEEEEeCCcHHHHHHHHHHcCCc
Confidence 34578889999999887 6 79999999999999999998874
No 436
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=30.86 E-value=61 Score=34.87 Aligned_cols=47 Identities=13% Similarity=0.097 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+|.-+...+...++.+++. ..||.++|+
T Consensus 96 ~g~~e~L~~Lk~~g----~-~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s 142 (224)
T PRK14988 96 EDTVPFLEALKASG----K-RRILLTNAHPHNLAVKLEHTGLD-AHLDLLLST 142 (224)
T ss_pred CCHHHHHHHHHhCC----C-eEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEe
Confidence 55678999999987 7 89999998888888888888874 347777765
No 437
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=30.78 E-value=3e+02 Score=30.54 Aligned_cols=117 Identities=18% Similarity=0.182 Sum_probs=62.4
Q ss_pred CChHHHHHHHHHHHHHcCCCeeEEEEEecCCCCCCCC-CcCCCcccccCCCCCCCCccccccCCeEEEeccCCCCccCcc
Q 001492 190 TGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVD-WSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYLR 268 (1067)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~~~~~~-~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~ri~~~~~~~~l~ 268 (1067)
.-|-++.+..|++.|.+.| ++|-|++-.++.|.-. .-.|..+ +..+....++++|..++..-.
T Consensus 39 GaGKSTli~~l~~~~~~~g--~~VaVlAVDPSSp~tGGAlLGDRi---------RM~~~~~d~~vfIRS~atRG~----- 102 (266)
T PF03308_consen 39 GAGKSTLIDALIRELRERG--KRVAVLAVDPSSPFTGGALLGDRI---------RMQELSRDPGVFIRSMATRGS----- 102 (266)
T ss_dssp TSSHHHHHHHHHHHHHHTT----EEEEEE-GGGGCC---SS--GG---------GCHHHHTSTTEEEEEE---SS-----
T ss_pred CCcHHHHHHHHHHHHhhcC--CceEEEEECCCCCCCCCcccccHH---------HhcCcCCCCCEEEeecCcCCC-----
Confidence 3488999999999999999 9999999866544321 1112222 222344567888887775322
Q ss_pred cccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCCchhHHHHHHHhcCCCcEEEEeCCCch
Q 001492 269 KELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGR 340 (1067)
Q Consensus 269 k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~~a~~~a~~l~~~~giP~V~t~H~l~~ 340 (1067)
+ -++........+.+.. ..+|+|.....-.|-.-.-++..-.+-+++..=+.+.
T Consensus 103 -------l----GGls~~t~~~v~ll~a-------aG~D~IiiETVGvGQsE~~I~~~aD~~v~v~~Pg~GD 156 (266)
T PF03308_consen 103 -------L----GGLSRATRDAVRLLDA-------AGFDVIIIETVGVGQSEVDIADMADTVVLVLVPGLGD 156 (266)
T ss_dssp -------H----HHHHHHHHHHHHHHHH-------TT-SEEEEEEESSSTHHHHHHTTSSEEEEEEESSTCC
T ss_pred -------C----CCccHhHHHHHHHHHH-------cCCCEEEEeCCCCCccHHHHHHhcCeEEEEecCCCcc
Confidence 1 1122222222222222 4589999887655555555665555555555555443
No 438
>PRK11587 putative phosphatase; Provisional
Probab=30.41 E-value=74 Score=33.83 Aligned_cols=46 Identities=7% Similarity=0.035 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+|+.+...+...++..++. .++.++|.
T Consensus 86 pg~~e~L~~L~~~g----~-~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~ 131 (218)
T PRK11587 86 PGAIALLNHLNKLG----I-PWAIVTSGSVPVASARHKAAGLP--APEVFVTA 131 (218)
T ss_pred cCHHHHHHHHHHcC----C-cEEEEcCCCchHHHHHHHhcCCC--CccEEEEH
Confidence 56779999999887 7 89999998877777778887774 36666653
No 439
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=29.75 E-value=61 Score=41.63 Aligned_cols=59 Identities=5% Similarity=-0.056 Sum_probs=44.5
Q ss_pred eEEEEEEeCCCC-CCCCchhhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 776 RLIVIALDCYDS-KGAPDKKMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 776 klllia~DiDGT-Ll~~~~~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+.++++.|..-. +..=...+-+..+++|++|++.| + .+++.||.+...+..+.+++|++
T Consensus 549 ~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~g----i-~~~llTGd~~~~a~~ia~~lgi~ 608 (741)
T PRK11033 549 TVVLVLRNDDVLGLIALQDTLRADARQAISELKALG----I-KGVMLTGDNPRAAAAIAGELGID 608 (741)
T ss_pred EEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCC----C-EEEEEcCCCHHHHHHHHHHcCCC
Confidence 556666653222 11112346688999999999997 8 89999999999999999999883
No 440
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=29.55 E-value=3e+02 Score=29.52 Aligned_cols=103 Identities=12% Similarity=0.079 Sum_probs=54.4
Q ss_pred CCcEEEEEeCCCCCCCHHH--HHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 479 HKPMILALSRPDPKKNITT--LLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 479 ~~~~Il~vgRld~~Kgi~~--ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
...+++..|.-.+.|.+.. ..+.+..+.+ .... .+++|+..+. ..+.+..+..... ...+.+.+.
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~--~~~~-vvl~g~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~ 171 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKE--RGYR-VVLLGGPEEQ---------EKEIADQIAAGLQ-NPVINLAGK 171 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCC--CT-E-EEE--SSHHH---------HHHHHHHHHTTHT-TTTEEETTT
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHh--hCce-EEEEccchHH---------HHHHHHHHHHhcc-cceEeecCC
Confidence 3445666666557776555 6677777742 2222 2355554321 0111222222221 126888888
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~ 603 (1067)
.+-.++.++++.| |++|-+ |+. .+-=|.|.|+|+|+=.
T Consensus 172 ~~l~e~~ali~~a----~~~I~~---Dtg--~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 172 TSLRELAALISRA----DLVIGN---DTG--PMHLAAALGTPTVALF 209 (247)
T ss_dssp S-HHHHHHHHHTS----SEEEEE---SSH--HHHHHHHTT--EEEEE
T ss_pred CCHHHHHHHHhcC----CEEEec---CCh--HHHHHHHHhCCEEEEe
Confidence 8888999999999 999976 332 3444788999999964
No 441
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=29.39 E-value=93 Score=35.91 Aligned_cols=50 Identities=12% Similarity=0.016 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhc-C-------CCCCCCCEEEEcCC
Q 001492 796 IQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSM-K-------IEANEFDALICSSG 851 (1067)
Q Consensus 796 ~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l-~-------i~~~~~d~~I~~nG 851 (1067)
.+.+.++|++|+++| + +++|+|.-+...+..+++.+ + +. .-||.+|+...
T Consensus 186 ~pgl~elL~~Lr~~G----~-klfLvTNS~~~yt~~im~~l~g~~~~~~~w~-~yFD~IIt~a~ 243 (343)
T TIGR02244 186 DPKLPLFLSKLKEHG----K-KLFLLTNSDYDYTDKGMKYLLGPFLGEHDWR-DYFDVVIVDAR 243 (343)
T ss_pred chhHHHHHHHHHHCC----C-eEEEEeCCCHHHHHHHHHHhhCCcccccchH-hhCcEEEeCCC
Confidence 367889999999987 7 89999999999999999985 5 22 34677776543
No 442
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=29.39 E-value=98 Score=31.76 Aligned_cols=68 Identities=16% Similarity=0.289 Sum_probs=42.8
Q ss_pred CCCchHHHHHHHHHHHhcCCcEEEEEeeCC-e-------e--EEEecCCCCH--HHHHHHHHHHhCCCcccEEEEecCCC
Q 001492 928 DPSKARRIDDLRQKLRMRGLRCHPMYCRNS-T-------R--MQIVPLLASR--SQALRYLFVRWRLNVANMFVILGESG 995 (1067)
Q Consensus 928 ~~~~~~~~~el~~~L~~~~~~~~v~~s~~~-~-------~--lEI~p~gasK--g~AL~~L~~~~gi~~e~vva~fGDs~ 995 (1067)
+++..+.+.+-...++..+..+.+ .|.+. . . ++.+- +|-| +.|+++.++.++++++++++ +||..
T Consensus 44 ~~~~tpe~~~W~~e~k~~gi~v~v-vSNn~e~RV~~~~~~l~v~fi~-~A~KP~~~~fr~Al~~m~l~~~~vvm-VGDqL 120 (175)
T COG2179 44 NPDATPELRAWLAELKEAGIKVVV-VSNNKESRVARAAEKLGVPFIY-RAKKPFGRAFRRALKEMNLPPEEVVM-VGDQL 120 (175)
T ss_pred CCCCCHHHHHHHHHHHhcCCEEEE-EeCCCHHHHHhhhhhcCCceee-cccCccHHHHHHHHHHcCCChhHEEE-Ecchh
Confidence 344455555555566666654433 33321 1 1 22221 2223 68999999999999999999 99998
Q ss_pred CCC
Q 001492 996 DTD 998 (1067)
Q Consensus 996 N~D 998 (1067)
=||
T Consensus 121 ~TD 123 (175)
T COG2179 121 FTD 123 (175)
T ss_pred hhh
Confidence 867
No 443
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=29.00 E-value=46 Score=34.13 Aligned_cols=42 Identities=17% Similarity=0.044 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCC-CCChhhhhcCCceEEEeC
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESG-DTDYEELISGAHKTLIMK 1013 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~-N~D~~eML~~ag~gVaMg 1013 (1067)
+...+..+++++|+++++++. |||+. . | +..=+.+|...+.-
T Consensus 93 ~p~~~~~~l~~~~~~~~~~l~-IGDs~~~-D-i~aA~~aGi~~i~v 135 (170)
T TIGR01668 93 PGCAFRRAHPEMGLTSEQVAV-VGDRLFT-D-VMGGNRNGSYTILV 135 (170)
T ss_pred ChHHHHHHHHHcCCCHHHEEE-ECCcchH-H-HHHHHHcCCeEEEE
Confidence 577899999999999999999 99998 6 8 77777788654443
No 444
>PRK11590 hypothetical protein; Provisional
Probab=28.47 E-value=94 Score=33.00 Aligned_cols=47 Identities=13% Similarity=0.007 Sum_probs=34.8
Q ss_pred HHHHHHHH-HHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcC
Q 001492 797 QIMYDVFK-AVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 797 ~~~~~al~-~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+...+.|+ .++++| . .++|+|+.+...+.+++..+++. ..+.+||..
T Consensus 98 pga~e~L~~~l~~~G----~-~l~IvSas~~~~~~~il~~l~~~--~~~~~i~t~ 145 (211)
T PRK11590 98 PVVQERLTTYLLSSD----A-DVWLITGSPQPLVEQVYFDTPWL--PRVNLIASQ 145 (211)
T ss_pred ccHHHHHHHHHHhCC----C-EEEEEeCCcHHHHHHHHHHcccc--ccCceEEEE
Confidence 55668884 566665 6 79999999999999999998852 234677654
No 445
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=27.68 E-value=57 Score=34.20 Aligned_cols=41 Identities=12% Similarity=0.172 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 969 RSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
+.....++++++|++++++++ |||+.. | +..=+.+|...+.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~-vgD~~~-d-i~aA~~aG~~~i~ 183 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVF-FDDNAD-N-IEAANALGITSIL 183 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEE-eCCCHH-H-HHHHHHcCCEEEE
Confidence 577788999999999999999 999998 8 8888888875543
No 446
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=27.67 E-value=67 Score=38.70 Aligned_cols=47 Identities=2% Similarity=0.059 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+|+.+...+...++.+++. ..||.++|.
T Consensus 333 pG~~e~L~~Lk~~g----~-~l~IvS~~~~~~~~~~l~~~~l~-~~f~~i~~~ 379 (459)
T PRK06698 333 PNVKEIFTYIKENN----C-SIYIASNGLTEYLRAIVSYYDLD-QWVTETFSI 379 (459)
T ss_pred CCHHHHHHHHHHCC----C-eEEEEeCCchHHHHHHHHHCCcH-hhcceeEec
Confidence 56678999999887 7 89999999999999999998875 347777764
No 447
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=27.33 E-value=68 Score=33.96 Aligned_cols=59 Identities=17% Similarity=0.227 Sum_probs=42.6
Q ss_pred eEEEEEEeCCCCCCCCchhhHHHHHHHHHHHHhcCCCCceeEEEE-ECCCCHHHHHHHHHhcCCCC
Q 001492 776 RLIVIALDCYDSKGAPDKKMIQIMYDVFKAVRLDHQTARVTGFAL-STAMPVSETIEFLNSMKIEA 840 (1067)
Q Consensus 776 klllia~DiDGTLl~~~~~i~~~~~~al~~l~~~g~~g~i~~~vI-aTGR~~~~~~~~l~~l~i~~ 840 (1067)
+-+++ |+.|||.+++. ..+...++++.|+.++ -++ +|+- .|+-+...+..-|..+|+++
T Consensus 8 ~gvLl--DlSGtLh~e~~-avpga~eAl~rLr~~~--~kV-kFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 8 KGVLL--DLSGTLHIEDA-AVPGAVEALKRLRDQH--VKV-KFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred ceEEE--eccceEecccc-cCCCHHHHHHHHHhcC--ceE-EEEecCcchhHHHHHHHHHHhCCCc
Confidence 44566 99999887754 4467789999999775 445 4443 35667778888888888764
No 448
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=26.90 E-value=54 Score=36.23 Aligned_cols=43 Identities=12% Similarity=-0.166 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhCCC-cccEEEEecCCCCCChhhhhcCCce-EEEeCC
Q 001492 969 RSQALRYLFVRWRLN-VANMFVILGESGDTDYEELISGAHK-TLIMKG 1014 (1067)
Q Consensus 969 Kg~AL~~L~~~~gi~-~e~vva~fGDs~N~D~~eML~~ag~-gVaMgN 1014 (1067)
+...+...++++|++ ++++++ |||+.+ | +.+=+.+|. .|++..
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~-IGDs~~-D-i~aA~~aG~~~i~v~~ 204 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVK-VDDTVP-G-IEEGLNAGMWTVGVIL 204 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEE-EcCcHH-H-HHHHHHCCCEEEEEcc
Confidence 457788999999996 689988 999999 9 888888885 444443
No 449
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=26.79 E-value=58 Score=31.69 Aligned_cols=31 Identities=16% Similarity=0.332 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHhC--CCcccEEEEecCCCCCChhh
Q 001492 968 SRSQALRYLFVRWR--LNVANMFVILGESGDTDYEE 1001 (1067)
Q Consensus 968 sKg~AL~~L~~~~g--i~~e~vva~fGDs~N~D~~e 1001 (1067)
.|...+.++++++| ++++++++ |||+.. | ++
T Consensus 90 pkp~~~~~a~~~lg~~~~p~~~l~-igDs~~-n-~~ 122 (128)
T TIGR01681 90 PKSPRLVEIALKLNGVLKPKSILF-VDDRPD-N-NE 122 (128)
T ss_pred cHHHHHHHHHHHhcCCCCcceEEE-ECCCHh-H-HH
Confidence 58999999999999 99999999 999987 7 44
No 450
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=26.36 E-value=1.1e+02 Score=29.88 Aligned_cols=39 Identities=15% Similarity=0.055 Sum_probs=28.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeE-EEEEec
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYR-VDLFSR 218 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~-V~v~t~ 218 (1067)
|||++|..++ |+.+-..+..+++|+++...| |+ |.||--
T Consensus 1 m~~~iv~~~~------------Py~~~~~~~al~~A~aa~~~g--h~v~~vFf~ 40 (128)
T PRK00207 1 MRYAIAVTGP------------AYGTQQASSAYQFAQALLAEG--HELVSVFFY 40 (128)
T ss_pred CEEEEEEcCC------------CCCCHHHHHHHHHHHHHHhCC--CCeeEEEEe
Confidence 6787776333 455556678899999999999 98 477644
No 451
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=26.30 E-value=42 Score=38.34 Aligned_cols=40 Identities=10% Similarity=0.201 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceEE
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKTL 1010 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~gV 1010 (1067)
.|...++.+++.+|+++++++. |||+.. | +.+-+.+...|
T Consensus 87 pk~~~i~~~~~~l~i~~~~~vf-idD~~~-d-~~~~~~~lp~~ 126 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTDSFLF-IDDNPA-E-RANVKITLPVK 126 (320)
T ss_pred chHHHHHHHHHHhCCCcCcEEE-ECCCHH-H-HHHHHHHCCCC
Confidence 7999999999999999999988 999999 9 77777655444
No 452
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=26.20 E-value=1e+02 Score=30.45 Aligned_cols=44 Identities=11% Similarity=0.189 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEE
Q 001492 798 IMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALIC 848 (1067)
Q Consensus 798 ~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~ 848 (1067)
.+.++|+.|+++| + .++|+|+.+...+..+++.+ +. ..|+.++|
T Consensus 68 g~~e~l~~L~~~g----~-~~~i~T~~~~~~~~~~~~~~-l~-~~f~~i~~ 111 (154)
T TIGR01549 68 GAADLLKRLKEAG----I-KLGIISNGSLRAQKLLLRKH-LG-DYFDLILG 111 (154)
T ss_pred CHHHHHHHHHHCc----C-eEEEEeCCchHHHHHHHHHH-HH-hcCcEEEe
Confidence 3678899998886 7 89999999999999888885 32 23555555
No 453
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=25.96 E-value=41 Score=35.15 Aligned_cols=32 Identities=13% Similarity=0.130 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhh
Q 001492 968 SRSQALRYLFVRWRLNVANMFVILGESGDTDYEEL 1002 (1067)
Q Consensus 968 sKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eM 1002 (1067)
-+...+.++++++|++++++++ |||+.+ | +..
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~-vGD~~~-D-i~a 193 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAM-VGDTVD-D-IIT 193 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEE-EeCCHH-H-HHH
Confidence 3567788999999999999999 999998 8 554
No 454
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=25.94 E-value=54 Score=33.79 Aligned_cols=26 Identities=4% Similarity=-0.095 Sum_probs=17.8
Q ss_pred EEEeCCCCCCCCchhhHHHHHHHHHH
Q 001492 780 IALDCYDSKGAPDKKMIQIMYDVFKA 805 (1067)
Q Consensus 780 ia~DiDGTLl~~~~~i~~~~~~al~~ 805 (1067)
+.+|+||||.+....+.....+++.+
T Consensus 3 viFDlDGTL~ds~~~~~~~~~~~~~~ 28 (184)
T TIGR01993 3 WFFDLDNTLYPHSAGIFLQIDRNITE 28 (184)
T ss_pred EEEeCCCCCCCCcccHHHHHHHHHHH
Confidence 34599999998765666655555544
No 455
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=25.75 E-value=95 Score=31.43 Aligned_cols=38 Identities=3% Similarity=-0.103 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
+...+.++.++++| + .++|+||.....+..+++.+++.
T Consensus 76 ~g~~~~l~~l~~~g----~-~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 76 PGARELISWLKERG----I-DTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCHHHHHHHHHHCC----C-EEEEECCCcHHHHHHHHHHcCCc
Confidence 55678899999887 7 79999999999999999998874
No 456
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=25.34 E-value=7e+02 Score=25.98 Aligned_cols=65 Identities=20% Similarity=0.265 Sum_probs=44.8
Q ss_pred cEEEecCCC-C---CCCHHHHHHHHc---CCCEEEc-CCCCc---hhhhccCCceEEeCCCCHHHHHHHHHHhhcC
Q 001492 574 GVFINPALV-E---PFGLTLIEAAAH---GLPMVAT-KNGGP---VDIHRALNNGLLVDPHDQQAIADALLKLVSE 638 (1067)
Q Consensus 574 dV~v~ps~~-E---gfgltllEAmA~---G~PVVat-~~Gg~---~eiv~~~~~Gllv~p~d~~~la~aL~~ll~d 638 (1067)
|++++-... + .-|+.+++.+.. .+|||.- ..... ...++.|..|++..|.+++++..+|..++..
T Consensus 51 DlvllD~~l~~~~~~~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~~g 126 (216)
T PRK10840 51 HVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 (216)
T ss_pred CEEEEeCcCCCCCCCCHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHHCC
Confidence 888775433 2 257777776643 5677653 33322 2446778889999999999999999987763
No 457
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=25.20 E-value=1.1e+02 Score=32.50 Aligned_cols=38 Identities=5% Similarity=-0.027 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcC
Q 001492 795 MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMK 837 (1067)
Q Consensus 795 i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~ 837 (1067)
+.+.+.++|+.++++| + .++|+||-....+..+++.++
T Consensus 71 l~pg~~e~l~~l~~~g----~-~~~IvS~~~~~~i~~il~~~~ 108 (214)
T TIGR03333 71 IREGFREFVAFINEHG----I-PFYVISGGMDFFVYPLLEGIV 108 (214)
T ss_pred ccccHHHHHHHHHHCC----C-eEEEECCCcHHHHHHHHHhhC
Confidence 3367789999999887 7 899999998889999998864
No 458
>PLN02940 riboflavin kinase
Probab=25.04 E-value=77 Score=37.20 Aligned_cols=48 Identities=13% Similarity=0.179 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHH-hcCCCCCCCCEEEEcC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLN-SMKIEANEFDALICSS 850 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~-~l~i~~~~~d~~I~~n 850 (1067)
+.+.++|+.|+++| + .++|+|+.+...+...++ ..++. ..||.++|+.
T Consensus 96 pGv~elL~~Lk~~g----~-~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d 144 (382)
T PLN02940 96 PGANRLIKHLKSHG----V-PMALASNSPRANIEAKISCHQGWK-ESFSVIVGGD 144 (382)
T ss_pred cCHHHHHHHHHHCC----C-cEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehh
Confidence 56678999999887 7 899999999998888886 56664 3478888854
No 459
>PF14980 TIP39: TIP39 peptide
Probab=24.87 E-value=47 Score=26.24 Aligned_cols=15 Identities=27% Similarity=0.851 Sum_probs=12.1
Q ss_pred CchhhhHHHHHHhcC
Q 001492 4 NEWINGYLEAILDSG 18 (1067)
Q Consensus 4 ~~~~~~~~~~~~~~~ 18 (1067)
-.|+|||..-+|-++
T Consensus 36 ~~WLnSYMqkLLv~~ 50 (51)
T PF14980_consen 36 QKWLNSYMQKLLVVN 50 (51)
T ss_pred HHHHHHHHHHHHccc
Confidence 359999999888654
No 460
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=24.86 E-value=2.9e+02 Score=31.59 Aligned_cols=45 Identities=22% Similarity=0.244 Sum_probs=34.5
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 001492 550 QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 550 ~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~ 603 (1067)
.+.+.|..+-.++.++++.| +++|-. ++. .+-=|.|.|+|+|+=.
T Consensus 242 ~~~l~g~~sL~el~ali~~a----~l~Vs~---DSG--p~HlAaA~g~p~v~Lf 286 (344)
T TIGR02201 242 VTSLAGKLTLPQLAALIDHA----RLFIGV---DSV--PMHMAAALGTPLVALF 286 (344)
T ss_pred ccccCCCCCHHHHHHHHHhC----CEEEec---CCH--HHHHHHHcCCCEEEEE
Confidence 35578888888999999999 898865 332 3444788999999854
No 461
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=24.14 E-value=2.2e+02 Score=29.32 Aligned_cols=44 Identities=16% Similarity=0.289 Sum_probs=30.8
Q ss_pred eEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCc
Q 001492 959 RMQIVPLLASRSQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAH 1007 (1067)
Q Consensus 959 ~lEI~p~gasKg~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag 1007 (1067)
++||.|. ||.+=++.|.+..||+.++|+. |.|... . .+-.+..|
T Consensus 101 ~~eI~~g--sK~~Hf~~i~~~tgI~y~eMlF-FDDe~~-N-~~~v~~lG 144 (169)
T PF12689_consen 101 YLEIYPG--SKTTHFRRIHRKTGIPYEEMLF-FDDESR-N-IEVVSKLG 144 (169)
T ss_dssp EEEESSS---HHHHHHHHHHHH---GGGEEE-EES-HH-H-HHHHHTTT
T ss_pred hhheecC--chHHHHHHHHHhcCCChhHEEE-ecCchh-c-ceeeEecC
Confidence 7999995 9999999999999999999877 888754 3 45555444
No 462
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=24.01 E-value=8.2e+02 Score=25.33 Aligned_cols=128 Identities=16% Similarity=0.141 Sum_probs=0.0
Q ss_pred CCceEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEE-EEecCCCCCCCCCcCCCcccccCCCCC
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVD-LFSRQVSSPEVDWSYGEPAEMLTGGPE 241 (1067)
Q Consensus 163 ~~~m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~-v~t~~~~~~~~~~~y~~~~e~l~~~~~ 241 (1067)
.+.|||.+-..-|. |-.+.+..++..|.+.| +.|- ++|..+.......
T Consensus 3 ~~~mki~ITG~PGv---------------GKtTl~~ki~e~L~~~g--~kvgGf~t~EVR~gGkR~-------------- 51 (179)
T COG1618 3 KMAMKIFITGRPGV---------------GKTTLVLKIAEKLREKG--YKVGGFITPEVREGGKRI-------------- 51 (179)
T ss_pred CcceEEEEeCCCCc---------------cHHHHHHHHHHHHHhcC--ceeeeEEeeeeecCCeEe--------------
Q ss_pred CCCccccccCCeEEEeccCCCCccCcccccccchhHHHHHHHHHHHHHHhHHHHhhhcCCCCCCceEEEEcCC-------
Q 001492 242 DDGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYA------- 314 (1067)
Q Consensus 242 ~~~~~~~~~~gv~i~ri~~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~L~~~~~~~~~~~pDvIh~h~~------- 314 (1067)
|.+|+.+..+..........--|.+-.+.-..-..-.-+..+|.+.+.. .|+|...-.
T Consensus 52 ----------GF~Ivdl~tg~~~~la~~~~~~~rvGkY~V~v~~le~i~~~al~rA~~~-----aDvIIIDEIGpMElks 116 (179)
T COG1618 52 ----------GFKIVDLATGEEGILARVGFSRPRVGKYGVNVEGLEEIAIPALRRALEE-----ADVIIIDEIGPMELKS 116 (179)
T ss_pred ----------eeEEEEccCCceEEEEEcCCCCcccceEEeeHHHHHHHhHHHHHHHhhc-----CCEEEEecccchhhcc
Q ss_pred chhHHHHHHHhcCCCcEEEEeC
Q 001492 315 DAGDSAALLSGALNVPMVLTGH 336 (1067)
Q Consensus 315 ~a~~~a~~l~~~~giP~V~t~H 336 (1067)
..-.-+.--.-..+.|+++|+|
T Consensus 117 ~~f~~~ve~vl~~~kpliatlH 138 (179)
T COG1618 117 KKFREAVEEVLKSGKPLIATLH 138 (179)
T ss_pred HHHHHHHHHHhcCCCcEEEEEe
No 463
>PHA02597 30.2 hypothetical protein; Provisional
Probab=23.92 E-value=39 Score=35.24 Aligned_cols=14 Identities=14% Similarity=0.033 Sum_probs=0.0
Q ss_pred CeEEEEEEeCCCCCCC
Q 001492 775 RRLIVIALDCYDSKGA 790 (1067)
Q Consensus 775 ~klllia~DiDGTLl~ 790 (1067)
.|+++| |+||||.+
T Consensus 2 ~k~viF--DlDGTLiD 15 (197)
T PHA02597 2 KPTILT--DVDGVLLS 15 (197)
T ss_pred CcEEEE--ecCCceEc
No 464
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=23.58 E-value=5.4e+02 Score=28.41 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=26.7
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVS 221 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~~ 221 (1067)
|||++-...|. ...-+..|+++|++ + |+|+|+++...
T Consensus 1 M~ILlTNDDGi----------------~a~Gi~aL~~~l~~-~--~~V~VvAP~~~ 37 (253)
T PRK13935 1 MNILVTNDDGI----------------TSPGIIILAEYLSE-K--HEVFVVAPDKE 37 (253)
T ss_pred CeEEEECCCCC----------------CCHHHHHHHHHHHh-C--CcEEEEccCCC
Confidence 78998887775 12336678888875 4 78999998653
No 465
>PRK09449 dUMP phosphatase; Provisional
Probab=23.51 E-value=95 Score=32.99 Aligned_cols=46 Identities=20% Similarity=0.187 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+ +| + .++|+|.-+...+...++.+++. ..||.++++
T Consensus 98 ~g~~~~L~~L~-~~----~-~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~ 143 (224)
T PRK09449 98 PGAVELLNALR-GK----V-KMGIITNGFTELQQVRLERTGLR-DYFDLLVIS 143 (224)
T ss_pred ccHHHHHHHHH-hC----C-eEEEEeCCcHHHHHHHHHhCChH-HHcCEEEEE
Confidence 55678889998 44 6 78999998888888889998874 247777765
No 466
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=23.39 E-value=57 Score=36.61 Aligned_cols=43 Identities=2% Similarity=-0.065 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHHhCC-CcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 967 ASRSQALRYLFVRWRL-NVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 967 asKg~AL~~L~~~~gi-~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
-....-+.+.+++++. +++++++ |||+.+ | +++-+.+|+.++.
T Consensus 251 kp~p~~~~~~l~~~~~~~~~~~~~-vgD~~~-d-~~~a~~~Gi~~i~ 294 (300)
T PHA02530 251 RPDDVVKEEIFWEKIAPKYDVLLA-VDDRDQ-V-VDMWRRIGLECWQ 294 (300)
T ss_pred CCcHHHHHHHHHHHhccCceEEEE-EcCcHH-H-HHHHHHhCCeEEE
Confidence 3445577777777888 5688888 999999 9 9999999987654
No 467
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=23.37 E-value=2.8e+02 Score=31.74 Aligned_cols=99 Identities=13% Similarity=0.078 Sum_probs=57.8
Q ss_pred CcEEEEEe-CCCCCCCHH--HHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCC
Q 001492 480 KPMILALS-RPDPKKNIT--TLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKH 556 (1067)
Q Consensus 480 ~~~Il~vg-Rld~~Kgi~--~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~ 556 (1067)
+.+++..| .-...|+++ ...+.+..+.+ .. ..++++|+.++ .+..+.+.+.+.- .+.+.|.
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~--~~-~~Vvl~g~~~e-----------~e~~~~i~~~~~~--~~~l~~k 239 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIA--KG-YQVVLFGGPDE-----------EERAEEIAKGLPN--AVILAGK 239 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHH--CC-CEEEEecChHH-----------HHHHHHHHHhcCC--ccccCCC
Confidence 34556666 444556554 55555555532 22 22235555432 2233344444331 1227888
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcC
Q 001492 557 HKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATK 603 (1067)
Q Consensus 557 ~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~ 603 (1067)
.+-.++.++...| |.+|-+ + .|++- =|.|.|+|+|+--
T Consensus 240 ~sL~e~~~li~~a----~l~I~~---D-Sg~~H-lAaA~~~P~I~iy 277 (334)
T COG0859 240 TSLEELAALIAGA----DLVIGN---D-SGPMH-LAAALGTPTIALY 277 (334)
T ss_pred CCHHHHHHHHhcC----CEEEcc---C-ChHHH-HHHHcCCCEEEEE
Confidence 8889999999999 898865 2 23333 3678899999954
No 468
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=23.25 E-value=80 Score=40.13 Aligned_cols=41 Identities=7% Similarity=0.046 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-+..+++|++|++.| + .+++.||=+...++.+.+++||+
T Consensus 537 ~~R~~a~~aI~~L~~~G----i-~~~mLTGDn~~~A~~iA~~lGId 577 (713)
T COG2217 537 ELRPDAKEAIAALKALG----I-KVVMLTGDNRRTAEAIAKELGID 577 (713)
T ss_pred CCChhHHHHHHHHHHCC----C-eEEEEcCCCHHHHHHHHHHcChH
Confidence 46689999999999998 8 89999999999999999999984
No 469
>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]
Probab=23.16 E-value=1.3e+03 Score=27.23 Aligned_cols=166 Identities=13% Similarity=0.113 Sum_probs=91.3
Q ss_pred cCCCCcEEEEEeCCCCCC---C---HHHHHHHHHhcccccCCCcEEEEEecCCChhhhhccchHHHHHHHHHHHhcCCCC
Q 001492 476 TNPHKPMILALSRPDPKK---N---ITTLLKAFGECRPLRELANLTLIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYG 549 (1067)
Q Consensus 476 ~~~~~~~Il~vgRld~~K---g---i~~ll~A~~~l~~l~~~~~l~lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~ 549 (1067)
.+.++++|++.-...+.. | +...++..+.... -...+..+|+=-.+.+.. .+.. .....+
T Consensus 204 ~~~~k~vIlyaPTfr~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~ii~k~Hp~is~----------~~~~---~~~~~~ 269 (388)
T COG1887 204 LPQDKKVILYAPTFRDNDVLIGTQFFNLDIDIEKLKEK-LGENEYVIIVKPHPLISD----------KIDK---RYALDD 269 (388)
T ss_pred CcccCceEEecCCccCCccccchhhhhhhhhHHHHHHh-hccCCeEEEEecChhhhh----------hhhh---hhhccc
Confidence 455789999998877665 2 2222222222211 222466666665543211 1111 001112
Q ss_pred cEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCCEEEcCC---------CCchhhhccCCceEEe
Q 001492 550 QVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKN---------GGPVDIHRALNNGLLV 620 (1067)
Q Consensus 550 ~V~~~g~~~~~dl~~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~G~PVVat~~---------Gg~~eiv~~~~~Gllv 620 (1067)
.+...-. ..++.++|..+ |++|. -+.-+..|+|..-+|||--.. |-..+. +....|-++
T Consensus 270 ~~~~vs~--~~di~dll~~s----DiLIT-----DySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~-~~~~Pg~~~ 337 (388)
T COG1887 270 FVLDVSD--NADINDLLLVS----DILIT-----DYSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDY-KFEAPGEVV 337 (388)
T ss_pred eeEeccc--chhHHHHHhhh----CEEEe-----echHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhH-HhcCCcccc
Confidence 2222222 47899999999 99884 578899999999999998642 222221 112345565
Q ss_pred CCCCHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 001492 621 DPHDQQAIADALLKLVSEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRV 669 (1067)
Q Consensus 621 ~p~d~~~la~aL~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 669 (1067)
. +..++.++|.....+++...+..+.-.+.+..+.-....+++.+.+
T Consensus 338 ~--~~~~li~ai~~~~~~~~~~~~k~~~~~~~~~~~~dg~ss~ri~~~i 384 (388)
T COG1887 338 E--TQEELIDAIKPYDEDGNYDLEKLRVFNDKFNSYEDGRSSERILKLI 384 (388)
T ss_pred c--cHHHHHHHHHhhhcccchhHHHHHHHHHhhcccccccHHHHHHHHH
Confidence 3 7889999999998866544433333333322222244445554443
No 470
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=22.92 E-value=69 Score=33.86 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHh-CCCcccEEEEecCCC-CCChhhhhcCCceEEEe
Q 001492 969 RSQALRYLFVRW-RLNVANMFVILGESG-DTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 969 Kg~AL~~L~~~~-gi~~e~vva~fGDs~-N~D~~eML~~ag~gVaM 1012 (1067)
+...+.++++++ |+++++++. |||+. + | +..=+.+|...+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~v~-igD~~~~-d-i~~A~~~G~~~i~ 196 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKEEVLM-IGDSLTA-D-IKGGQNAGLDTCW 196 (224)
T ss_pred CHHHHHHHHHHhcCCCchheEE-ECCCcHH-H-HHHHHHCCCcEEE
Confidence 556788999999 999999998 99997 7 8 8888888875444
No 471
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=22.36 E-value=1.2e+02 Score=31.94 Aligned_cols=46 Identities=11% Similarity=0.113 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+...++|+++++. + .++|+|+.+...+...++.+++. .-||.++++
T Consensus 100 ~g~~~~L~~l~~~-----~-~~~i~Sn~~~~~~~~~l~~~~l~-~~fd~i~~~ 145 (224)
T TIGR02254 100 PGAFELMENLQQK-----F-RLYIVTNGVRETQYKRLRKSGLF-PFFDDIFVS 145 (224)
T ss_pred ccHHHHHHHHHhc-----C-cEEEEeCCchHHHHHHHHHCCcH-hhcCEEEEc
Confidence 4566888888765 4 68999999999999999998885 347777775
No 472
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=22.22 E-value=1.5e+02 Score=36.52 Aligned_cols=69 Identities=10% Similarity=0.174 Sum_probs=44.3
Q ss_pred EEEEeCCCCCCCCc---hh--------hHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHH---HHHHHhcCCCCCCCC
Q 001492 779 VIALDCYDSKGAPD---KK--------MIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSET---IEFLNSMKIEANEFD 844 (1067)
Q Consensus 779 lia~DiDGTLl~~~---~~--------i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~---~~~l~~l~i~~~~~d 844 (1067)
+|..|+|||+..++ +- -...+.++..++.++| . +++.+|.|++..+ +.+|+.+.- |
T Consensus 532 IVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NG----Y-k~lyLSARaIgQA~~TR~yL~nv~Q-----d 601 (738)
T KOG2116|consen 532 IVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENG----Y-KILYLSARAIGQADSTRQYLKNVEQ-----D 601 (738)
T ss_pred EEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCC----e-eEEEEehhhhhhhHHHHHHHHHHhh-----c
Confidence 34459999955432 11 1345678888899997 6 8999999988754 566766322 3
Q ss_pred EEEEcCCceEEec
Q 001492 845 ALICSSGGEMYYP 857 (1067)
Q Consensus 845 ~~I~~nGa~I~~~ 857 (1067)
+.+.-.|-.|..|
T Consensus 602 G~~LPdGPViLSP 614 (738)
T KOG2116|consen 602 GKKLPDGPVILSP 614 (738)
T ss_pred CccCCCCCEEeCC
Confidence 4444455555554
No 473
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=22.00 E-value=1.2e+02 Score=31.05 Aligned_cols=45 Identities=16% Similarity=0.293 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEc
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICS 849 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~ 849 (1067)
+.+.++|+.|+++| + .++|+|+... ....++.+++. ..||.++++
T Consensus 90 pg~~~~L~~L~~~g----~-~~~i~s~~~~--~~~~l~~~~l~-~~f~~~~~~ 134 (185)
T TIGR01990 90 PGIKNLLDDLKKNN----I-KIALASASKN--APTVLEKLGLI-DYFDAIVDP 134 (185)
T ss_pred ccHHHHHHHHHHCC----C-eEEEEeCCcc--HHHHHHhcCcH-hhCcEEEeh
Confidence 66779999999886 7 7899998643 45678888875 347777754
No 474
>PLN02811 hydrolase
Probab=21.97 E-value=87 Score=33.37 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhC---CCcccEEEEecCCCCCChhhhhcCCceEEEe
Q 001492 969 RSQALRYLFVRWR---LNVANMFVILGESGDTDYEELISGAHKTLIM 1012 (1067)
Q Consensus 969 Kg~AL~~L~~~~g---i~~e~vva~fGDs~N~D~~eML~~ag~gVaM 1012 (1067)
+...+.+.++++| ++++++++ |||+.. | +.+=+.+|..++.
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~-IgDs~~-d-i~aA~~aG~~~i~ 182 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLV-FEDAPS-G-VEAAKNAGMSVVM 182 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEE-EeccHh-h-HHHHHHCCCeEEE
Confidence 4567888889886 99999999 999999 9 8888888865443
No 475
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=21.67 E-value=1.7e+02 Score=29.34 Aligned_cols=102 Identities=18% Similarity=0.258 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHHHHHHHhhcC-CcEEEecCCCCCCCHHHHHHHHc-CCCEEEcCCCC--c
Q 001492 532 ASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKT-KGVFINPALVEPFGLTLIEAAAH-GLPMVATKNGG--P 607 (1067)
Q Consensus 532 ~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~~ly~~A~~~-~dV~v~ps~~EgfgltllEAmA~-G~PVVat~~Gg--~ 607 (1067)
+++...+.+.+..+++ .+.|...-..-++.+.++.|... -.++++|.-+--.+..+..|+++ ++|+|=-...- .
T Consensus 29 ~~i~~~~~~~a~~~g~--~~~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~DAl~~~~~P~VEVHiSNi~a 106 (146)
T PRK13015 29 ADVEALCRAAAEALGL--EVEFRQSNHEGELIDWIHEARGDVAGIVINPGAYTHTSVAIRDALAALELPVIEVHISNVHA 106 (146)
T ss_pred HHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHHhhhcCCEEEEcchHHhhhHHHHHHHHHcCCCCEEEEEcCCccc
Confidence 3455666667777776 46666554455677777766333 35888998777788999999877 99998644221 2
Q ss_pred hh------hhccCCceEEeCCCCHHHHHHHHHHhh
Q 001492 608 VD------IHRALNNGLLVDPHDQQAIADALLKLV 636 (1067)
Q Consensus 608 ~e------iv~~~~~Gllv~p~d~~~la~aL~~ll 636 (1067)
+| ++.....|.+.-- -.+...-||..++
T Consensus 107 RE~fR~~S~is~~~~G~I~G~-G~~gY~lAl~al~ 140 (146)
T PRK13015 107 REAFRHHSYVSAIADGVICGL-GTEGYRLALRRLA 140 (146)
T ss_pred cccccccccccCceeEEEeeC-CHHHHHHHHHHHH
Confidence 33 3333345665532 3566666666655
No 476
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=20.61 E-value=1.1e+02 Score=32.07 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=25.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCChHHHHHHHHHHHHHcCCCeeEEEEEecCC
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQV 220 (1067)
Q Consensus 166 m~I~lIs~~~~~~~~~~~~g~~~~~GG~~~yv~~LA~aLa~~G~v~~V~v~t~~~ 220 (1067)
|||++|...|. +.. .+++...++| |+|+-++|..
T Consensus 1 mKIaiIgAsG~----------------~Gs---~i~~EA~~RG--HeVTAivRn~ 34 (211)
T COG2910 1 MKIAIIGASGK----------------AGS---RILKEALKRG--HEVTAIVRNA 34 (211)
T ss_pred CeEEEEecCch----------------hHH---HHHHHHHhCC--CeeEEEEeCh
Confidence 79999985553 333 3667777899 9999999953
No 477
>PRK10671 copA copper exporting ATPase; Provisional
Probab=20.61 E-value=1.7e+02 Score=38.13 Aligned_cols=41 Identities=5% Similarity=-0.014 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCC
Q 001492 794 KMIQIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIE 839 (1067)
Q Consensus 794 ~i~~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~ 839 (1067)
.+-+..+++|++|++.| + .++++||.+...+..+++.+|++
T Consensus 650 ~~r~~a~~~i~~L~~~g----i-~v~~~Tgd~~~~a~~ia~~lgi~ 690 (834)
T PRK10671 650 PLRSDSVAALQRLHKAG----Y-RLVMLTGDNPTTANAIAKEAGID 690 (834)
T ss_pred cchhhHHHHHHHHHHCC----C-eEEEEcCCCHHHHHHHHHHcCCC
Confidence 45577889999999987 8 89999999999999999998884
No 478
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=20.53 E-value=2.6e+02 Score=28.96 Aligned_cols=28 Identities=18% Similarity=0.183 Sum_probs=23.3
Q ss_pred CCCcccEEEEecCCCCCChhhhhcCCceEEE
Q 001492 981 RLNVANMFVILGESGDTDYEELISGAHKTLI 1011 (1067)
Q Consensus 981 gi~~e~vva~fGDs~N~D~~eML~~ag~gVa 1011 (1067)
|++++++++ |||+.. | +..=+.+|.-++
T Consensus 127 gl~p~e~l~-VgDs~~-d-i~aA~~aGi~~i 154 (174)
T TIGR01685 127 VLKPAQILF-FDDRTD-N-VREVWGYGVTSC 154 (174)
T ss_pred CCCHHHeEE-EcChhH-h-HHHHHHhCCEEE
Confidence 699999999 999999 9 887777776544
No 479
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=20.46 E-value=71 Score=33.67 Aligned_cols=42 Identities=10% Similarity=0.158 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhCCCcccEEEEecCCCCCChhhhhcCCceE-EEeCC
Q 001492 970 SQALRYLFVRWRLNVANMFVILGESGDTDYEELISGAHKT-LIMKG 1014 (1067)
Q Consensus 970 g~AL~~L~~~~gi~~e~vva~fGDs~N~D~~eML~~ag~g-VaMgN 1014 (1067)
.....++++++|++++++++ |||+.. | +.+=+.+|.. |.+.+
T Consensus 155 p~~~~~~~~~~g~~~~~~l~-i~D~~~-d-i~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVF-LDDLGS-N-LKPAAALGITTIKVSD 197 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEE-EcCCHH-H-HHHHHHcCCEEEEECC
Confidence 56788999999999999999 899999 9 8888888864 44444
No 480
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=20.35 E-value=1.4e+02 Score=31.23 Aligned_cols=47 Identities=13% Similarity=0.162 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhcCCCCceeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEEcC
Q 001492 797 QIMYDVFKAVRLDHQTARVTGFALSTAMPVSETIEFLNSMKIEANEFDALICSS 850 (1067)
Q Consensus 797 ~~~~~al~~l~~~g~~g~i~~~vIaTGR~~~~~~~~l~~l~i~~~~~d~~I~~n 850 (1067)
+.+.++|+.|+++| + .++|+|+-+. .+...++.+++. ..||.++++.
T Consensus 108 ~g~~~~l~~L~~~g----~-~~~i~Sn~~~-~~~~~l~~~~l~-~~fd~i~~s~ 154 (203)
T TIGR02252 108 PDAIKLLKDLRERG----L-ILGVISNFDS-RLRGLLEALGLL-EYFDFVVTSY 154 (203)
T ss_pred cCHHHHHHHHHHCC----C-EEEEEeCCch-hHHHHHHHCCcH-HhcceEEeec
Confidence 56678999999886 6 7889998655 457788888774 2477777653
No 481
>PLN03004 UDP-glycosyltransferase
Probab=20.31 E-value=1.3e+03 Score=27.62 Aligned_cols=25 Identities=16% Similarity=0.361 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHHHcCCCeeEEEEE
Q 001492 192 GQIKYVVELARALARMPGVYRVDLF 216 (1067)
Q Consensus 192 G~~~yv~~LA~aLa~~G~v~~V~v~ 216 (1067)
|...=.++||+.|+.+|+-+.|+++
T Consensus 15 GHi~P~l~LA~~La~~g~~~~vti~ 39 (451)
T PLN03004 15 GHLVSMVELGKTILSKNPSLSIHII 39 (451)
T ss_pred chHHHHHHHHHHHHhCCCceEEEEE
Confidence 7888899999999998732245553
No 482
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=20.25 E-value=5.6e+02 Score=28.38 Aligned_cols=109 Identities=11% Similarity=0.108 Sum_probs=63.9
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE--EEecCCChhhhhccchHHHHHHHHHHHhcCCCCcEEeCCCCCCCCHH
Q 001492 486 LSRPDPKKNITTLLKAFGECRPLRELANLTL--IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVP 563 (1067)
Q Consensus 486 vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~l--IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dl~ 563 (1067)
++-+--....+.+++....+..... .+.. +.=+|........-..+-+..+.+.+.++|+ -.+.-.++..++.
T Consensus 29 IAGpc~ie~~~~~~~~A~~lk~~~~--k~~r~~~~KpRtsp~s~~g~g~~gl~~l~~~~~~~Gl---~~~t~~~d~~~~~ 103 (260)
T TIGR01361 29 IAGPCSVESEEQIMETARFVKEAGA--KILRGGAFKPRTSPYSFQGLGEEGLKLLRRAADEHGL---PVVTEVMDPRDVE 103 (260)
T ss_pred EEeCCccCCHHHHHHHHHHHHHHHH--HhccCceecCCCCCccccccHHHHHHHHHHHHHHhCC---CEEEeeCChhhHH
Confidence 4446556677788887777753221 1110 1112221111111123445667777888876 3334445566777
Q ss_pred HHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-CCCEEEcCC
Q 001492 564 EIYRLAAKTKGVFINPALVEPFGLTLIEAAAH-GLPMVATKN 604 (1067)
Q Consensus 564 ~ly~~A~~~~dV~v~ps~~EgfgltllEAmA~-G~PVVat~~ 604 (1067)
.+...+ |++-+||. +-.+..+++++|. |+||+.+.-
T Consensus 104 ~l~~~~----d~lkI~s~-~~~n~~LL~~~a~~gkPVilk~G 140 (260)
T TIGR01361 104 IVAEYA----DILQIGAR-NMQNFELLKEVGKQGKPVLLKRG 140 (260)
T ss_pred HHHhhC----CEEEECcc-cccCHHHHHHHhcCCCcEEEeCC
Confidence 777777 99888875 5567778888776 999988764
No 483
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=20.01 E-value=1.5e+02 Score=30.28 Aligned_cols=26 Identities=15% Similarity=0.452 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHhC--CCcccEEEEecCCC
Q 001492 969 RSQALRYLFVRWR--LNVANMFVILGESG 995 (1067)
Q Consensus 969 Kg~AL~~L~~~~g--i~~e~vva~fGDs~ 995 (1067)
+...+.++++++| +++++++. +||+.
T Consensus 110 ~p~~~~~~~~~~~~~~~~~~~v~-VGD~~ 137 (166)
T TIGR01664 110 MTGMWEYLQSQYNSPIKMTRSFY-VGDAA 137 (166)
T ss_pred ccHHHHHHHHHcCCCCCchhcEE-EECCC
Confidence 3568999999999 99999999 99985
Done!