Query 001492
Match_columns 1067
No_of_seqs 584 out of 4752
Neff 7.5
Searched_HMMs 29240
Date Tue Mar 26 16:52:56 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001492.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_793-796//hhsearch_pdb/001492hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s28_A Sucrose synthase 1; gly 1.0 1 1 483.2 37.0 463 163-674 276-771 (816)
2 2r60_A Glycosyl transferase, g 1.0 1 1 388.6 36.9 444 163-677 5-464 (499)
3 3fro_A GLGA glycogen synthase; 1.0 1 1 366.3 31.8 428 164-675 1-433 (439)
4 3c48_A Predicted glycosyltrans 1.0 1 1 354.1 39.4 412 163-678 18-431 (438)
5 3vue_A GBSS-I, granule-bound s 1.0 1 1 342.4 33.7 452 161-674 5-513 (536)
6 1rzu_A Glycogen synthase 1; gl 1.0 1 1 337.5 27.4 443 166-676 1-479 (485)
7 2qzs_A Glycogen synthase; glyc 1.0 1 1 333.7 30.1 447 166-676 1-480 (485)
8 3okp_A GDP-mannose-dependent a 1.0 1 1 324.3 31.0 372 163-676 2-383 (394)
9 2iw1_A Lipopolysaccharide core 1.0 1 1 319.6 25.4 368 166-673 1-372 (374)
10 2jjm_A Glycosyl transferase, g 1.0 1 1 317.9 36.6 361 188-676 24-389 (394)
No 1
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=483.15 Aligned_cols=463 Identities=24% Similarity=0.418 Sum_probs=354.4
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH--------HHHHHHCCCCEEEE----EEEECCCCCCCCCCCCC
Q ss_conf 8723999994134434687678898887748899999--------99999809990389----99824889998787678
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVE--------LARALARMPGVYRV----DLFSRQVSSPEVDWSYG 230 (1067)
Q Consensus 163 ~~~l~I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~--------LA~aLa~~G~v~~V----~viT~~~~~~~v~~~y~ 230 (1067)
.+.|||+|||.||++++.++ +|+ ||+|||+.||++ ||++|+++| |+| +|+|+.+.++ ..+.|+
T Consensus 276 ~~~~~i~~is~hg~~~~~~~-lG~-~dtGGq~vyV~e~~~al~~ela~~L~~~G--~~V~~~V~v~Tr~~~~~-~g~~y~ 350 (816)
T 3s28_A 276 PMVFNVVILSPHGYFAQDNV-LGY-PDTGGQVVYILDQVRALEIEMLQRIKQQG--LNIKPRILILTRLLPDA-VGTTCG 350 (816)
T ss_dssp CCCCEEEEECCSSCCCSSSC-TTS-TTCSHHHHHHHHHHHHHHHHHHHHHHHTT--CCCCCEEEEEEECCTTC-TTSSTT
T ss_pred CCEEEEEEECCCCCCCCCCC-CCC-CCCCCCEEEHHHHHHHHHHHHHHHHHHCC--CCCCEEEEEEECCCCCC-CCCCCC
T ss_conf 85248999847766575445-788-88898365099899899999999999779--96200168996898787-777657
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 763114799998985445668809996367887----6675534665206778999999999974898866259999985
Q 001492 231 EPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPR----DKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWP 306 (1067)
Q Consensus 231 ~~~e~l~~~~~~~~~~~~~~~gv~i~rip~~~~----~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~p 306 (1067)
++.+.+. ..+|++|+|+|+++. .+|++++.+|+++..|...++..+... ...+|
T Consensus 351 ~~~e~i~-----------~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~-----------~~~~P 408 (816)
T 3s28_A 351 ERLERVY-----------DSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKE-----------LNGKP 408 (816)
T ss_dssp SSEEECT-----------TCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHH-----------CSSCC
T ss_pred CCCEEEC-----------CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----------CCCCC
T ss_conf 7511554-----------8697599996687766543345657788999999999999999996-----------58997
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH
Q ss_conf 49998698236999999814999699995799222579998618897455655767878678754012357799928988
Q 001492 307 YVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQ 386 (1067)
Q Consensus 307 DvIh~h~~~~~~~a~~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~~S~~ 386 (1067)
||||+|+++++.++.++++.+|+|+|+|.|+++..+.. .....+..+...|++..++.+|+.+++.||.|||+|++
T Consensus 409 DVIHsH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~----~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~ 484 (816)
T 3s28_A 409 DLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP----DSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQ 484 (816)
T ss_dssp SEEEEEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHST----TTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHH
T ss_conf 39996885389999999997599889998166300122----23301556778888988888999999849999988899
Q ss_pred HHHHHHHH------CCCCC-HHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999710------17970-578999999771374457888997899399988999657899975422111124788899
Q 001492 387 EIDEQWGL------YDGFD-VKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGS 459 (1067)
Q Consensus 387 ~~~~~~~~------~~~~~-~~~~~~l~~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 459 (1067)
+++.+... +.++. |. ..+.+...+.+.+++.|||||+|.+.|.|...... .+.........
T Consensus 485 ~~~~l~~~~~~y~~~~~~~~p~--------Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~---Rl~~~~~~i~~- 552 (816)
T 3s28_A 485 EIAGSKETVGQYESHTAFTLPG--------LYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKR---RLTKFHSEIEE- 552 (816)
T ss_dssp HHHCCSSSCCTTGGGSSEEETT--------TEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTT---CCGGGHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHCCCCCH--------HHHCCCCCCCCCCCEEEECCCCCHHHCCCCCHHHH---HHHHCCCCCCC-
T ss_conf 9999998887764420135411--------22101224467788799889747887286310355---43200232000-
Q ss_pred CCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCHHHHHCCCHHHHHHH
Q ss_conf 999861235766531169998589997089999999999999975013469995999-9932899245410655899999
Q 001492 460 SPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITV 538 (1067)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i 538 (1067)
....|..+.....+...+++++|+++||+++.||++.+++|+..+... .+++.| |+|++++......+...+...+
T Consensus 553 -~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~--~~~v~LvIvG~g~~~~~~~~e~~~~~~~L 629 (816)
T 3s28_A 553 -LLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRL--RELANLVVVGGDRRKESKDNEEKAEMKKM 629 (816)
T ss_dssp -HHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHH--HHHCEEEEECCCTTSCCCCHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH--CCCEEEEEEECCCCCCCCCHHHHHHHHHH
T ss_conf -124605677774445789983999974472217999999999997855--79969999968875333433569999999
Q ss_pred HHHHHHCCCCCCEEECCCCCC----CCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCC
Q ss_conf 999976299996893999998----9999999971318939994499898878999999849979992887701100148
Q 001492 539 LKLIDKYDLYGQVAYPKHHKQ----YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL 614 (1067)
Q Consensus 539 ~~l~~~~~l~~~V~~~g~~~~----~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~ 614 (1067)
..+++++++.++|.|+|+.+. +++..+|..++ |+||+||..|+||++++||||||+|||+|+.||+.|++.++
T Consensus 630 ~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aa---DvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg 706 (816)
T 3s28_A 630 YDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTK---GAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHG 706 (816)
T ss_dssp HHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTT---CEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBT
T ss_pred HHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCC---EEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHCCC
T ss_conf 999997499872898167556689999999999569---09998887557649999999809999996898769997069
Q ss_pred CCEEEECCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8669949999999999999963----19999999999998999-709989999999999999683
Q 001492 615 NNGLLVDPHDQQAIADALLKLV----SEKNLWVECRKNGWKNI-HLFSWPEHCRTYLTRVAACRM 674 (1067)
Q Consensus 615 ~~Gllv~p~d~~~la~aL~~ll----~d~~~~~~~~~~a~~~v-~~fsw~~~a~~~l~~l~~~~~ 674 (1067)
.+|++++|.|+++++++|.+++ .+++.+.++++++++.+ +.|||+.++++|+++|+....
T Consensus 707 ~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g~ 771 (816)
T 3s28_A 707 KSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGF 771 (816)
T ss_dssp TTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 81899689999999999999998752699999999999999999868999999999999999767
No 2
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=388.63 Aligned_cols=444 Identities=31% Similarity=0.495 Sum_probs=322.1
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87239999941344346876788988877488999999999980999038999824889998787678763114799998
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPED 242 (1067)
Q Consensus 163 ~~~l~I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~~~~ 242 (1067)
.++|||++|+.++++.+.+++....+..||+++++.+|+++|+++| |+|+|+|.......+ ..|....+.+
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~-~~~~~~~~~~------ 75 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG--VQVDIITRRIKDENW-PEFSGEIDYY------ 75 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT--CEEEEEEECCCBTTB-GGGCCSEEEC------
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCC--CEEEEEECCCCCCCC-CCHHHHHHHC------
T ss_conf 4452499996577744344234788887994334999999998559--848999578872336-5113567750------
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 98544566880999636788766755346652067789999999999748988662599999854999869823699999
Q 001492 243 DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAAL 322 (1067)
Q Consensus 243 ~~~~~~~~~gv~i~rip~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~a~~ 322 (1067)
....|+.+++++..+. .+..+..+|.++..+...+...+.+. ..+|||||+|++..+..+.+
T Consensus 76 -----~~~~gv~v~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~------------~~~~Divh~~~~~~~~~~~~ 137 (499)
T 2r60_A 76 -----QETNKVRIVRIPFGGD-KFLPKEELWPYLHEYVNKIINFYREE------------GKFPQVVTTHYGDGGLAGVL 137 (499)
T ss_dssp -----TTCSSEEEEEECCSCS-SCCCGGGCGGGHHHHHHHHHHHHHHH------------TCCCSEEEEEHHHHHHHHHH
T ss_pred -----CCCCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHC------------CCCCCEEEECCCCCHHHHHH
T ss_conf -----6789817998257776-77688999998999999999999853------------89988899757862079999
Q ss_pred HHHCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHH--CCCC--
Q ss_conf 981499969999579922257999861889745565576787867875401235779992898899999710--1797--
Q 001492 323 LSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGL--YDGF-- 398 (1067)
Q Consensus 323 l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~--~~~~-- 398 (1067)
+++..++|+|+|.|+............+. ....+...+++..+...++..++.+|.|+++|+...+.+... |+.+
T Consensus 138 ~~~~~~~p~v~~~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~ 216 (499)
T 2r60_A 138 LKNIKGLPFTFTGHSLGAQKMEKLNVNTS-NFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVN 216 (499)
T ss_dssp HHHHHCCCEEEECSSCHHHHHHTTCCCST-TSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCC
T ss_pred HHHHCCCCEEEECCCCCCCCCHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCC
T ss_conf 88735996899806840011134414787-76124556788899999999984689999888899999986412464223
Q ss_pred --CHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC-
Q ss_conf --05789999997713744578889978993999889996578999754221111247888999998612357665311-
Q 001492 399 --DVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFL- 475 (1067)
Q Consensus 399 --~~~~~~~l~~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 475 (1067)
.+. ++.+||||+|...|.+... .......+.++.
T Consensus 217 ~~~~~---------------------ki~vi~ngvd~~~~~~~~~----------------------~~~~~~~r~~~~~ 253 (499)
T 2r60_A 217 VEDDD---------------------KFSVIPPGVNTRVFDGEYG----------------------DKIKAKITKYLER 253 (499)
T ss_dssp TTCGG---------------------GEEECCCCBCTTTSSSCCC----------------------HHHHHHHHHHHHH
T ss_pred CCCCC---------------------CEEEECCCCCHHHCCCCCH----------------------HHHHHHHHHHHCC
T ss_conf 46788---------------------7699879958665686410----------------------3567899988364
Q ss_pred ----CCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCH----HHHHCCCHHHHHHHHHHHHHCCC
Q ss_conf ----6999858999708999999999999997501346999599999328992----45410655899999999976299
Q 001492 476 ----TNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDI----EEMSSGNASVLITVLKLIDKYDL 547 (1067)
Q Consensus 476 ----~~~~~~~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~lIvG~~~~~----~~l~~~~~~~~~~i~~l~~~~~l 547 (1067)
..++.++|+++||+.+.||++.+++|+..+..........+|+|+.+.. ..+.....+|...+.+++.++++
T Consensus 254 ~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l 333 (499)
T 2r60_A 254 DLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDC 333 (499)
T ss_dssp HSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 33456888768999606850158899999999998738886599998788875322111132014799999999986499
Q ss_pred CCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHH
Q ss_conf 99689399999899999999713189399944998988789999998499799928877011001488669949999999
Q 001492 548 YGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQA 627 (1067)
Q Consensus 548 ~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~ 627 (1067)
.++|.|+|+++.+++..+|+.|..+.|++|+||..|+||++++||||||+|||+++.||..|++.++.+|+++++.|+++
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~ 413 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPED 413 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHCCCCEEEEECCCCHHH
T ss_conf 86099878899899999999557679889978645897968999997699889816887788734786079958999999
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999963199999999999989997-09989999999999999683199
Q 001492 628 IADALLKLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRVAACRMRHP 677 (1067)
Q Consensus 628 la~aL~~ll~d~~~~~~~~~~a~~~v~-~fsw~~~a~~~l~~l~~~~~~~~ 677 (1067)
++++|.+++++++++.++++++++.++ .|||+.++++|+++|+++.....
T Consensus 414 la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~ 464 (499)
T 2r60_A 414 IARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKD 464 (499)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998699999999999999998757999999999999999873213
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=366.26 Aligned_cols=428 Identities=21% Similarity=0.246 Sum_probs=305.0
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 72399999413443468767889888774889999999999809990389998248899987876787631147999989
Q 001492 164 KKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDD 243 (1067)
Q Consensus 164 ~~l~I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~~~~~ 243 (1067)
++|||++|+.+.. + +..||.++++.+|+++|+++| |+|+|+|+........ .-....... ....+
T Consensus 1 r~MkIl~v~~~~~--------p--~~~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~~--~~~~~~~~~-~~~~~ 65 (439)
T 3fro_A 1 RHMKVLLLGFEFL--------P--VKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQGE--EIGKIRVFG-EEVQV 65 (439)
T ss_dssp CCCEEEEECSCCT--------T--SCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTCSCCE--EEEEEEETT-EEEEE
T ss_pred CCEEEEEEECCCC--------C--CCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCHHH--HHCCCCCCC-CCCCE
T ss_conf 9528999950217--------7--666889999999999999779--8599983677882365--524630147-65310
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 8544566880999636788766755346652-067789999999999748988662599999854999869823699999
Q 001492 244 GIEVGESSGAYIIRIPFGPRDKYLRKELLWP-YIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAAL 322 (1067)
Q Consensus 244 ~~~~~~~~gv~i~rip~~~~~~~l~k~~l~~-~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~a~~ 322 (1067)
.......+|+.+++++. + +..+..+++ +...+...+......+.+.+...+.. ..+||+||+|++..+..+.+
T Consensus 66 ~~~~~~~~gv~v~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Dii~~~~~~~~~~~~~ 139 (439)
T 3fro_A 66 KVSYEERGNLRIYRIGG-G---LLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE--EPLPDVVHFHDWHTVFAGAL 139 (439)
T ss_dssp EEEEEEETTEEEEEEES-G---GGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTT--SCCCSEEEEESGGGHHHHHH
T ss_pred EEEECCCCCCEEEEECC-H---HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHHHHH
T ss_conf 24312578840899353-2---205212466776300232578999999999997444--79981999464034345898
Q ss_pred HHHCCCCCEEEEECCCCHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCHH
Q ss_conf 981499969999579922257999-8618897455655767878678754012357799928988999997101797057
Q 001492 323 LSGALNVPMVLTGHSLGRNKLEQL-LKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVK 401 (1067)
Q Consensus 323 l~~~~giP~V~t~H~l~~~~~~~l-~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~~~~~~~~ 401 (1067)
+++..++|+|++.|+......... .....+... .....+..++..++.+|.++++|+...+..++.+.. .
T Consensus 140 ~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~-~-- 210 (439)
T 3fro_A 140 IKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL------APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRN-F-- 210 (439)
T ss_dssp HHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGG------CCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGG-G--
T ss_pred HHHCCCCCEEEEECCCCCCCCCHHHHCCCCCCCC------CCCCEEEHHHHHHHHCCEEEECCHHHHHHHHHHHHH-C--
T ss_conf 8652699789996534445685677474551003------566632076665543458872689899998605650-4--
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 89999997713744578889978993999889996578999754221111247888999998612357665311699985
Q 001492 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKP 481 (1067)
Q Consensus 402 ~~~~l~~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1067)
..++.+||||+|.+.|.+....+ .........+.++..+++ +
T Consensus 211 -------------------~~~i~vi~ngvd~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~-~ 252 (439)
T 3fro_A 211 -------------------EGKITYVFNGIDCSFWNESYLTG------------------SRDERKKSLLSKFGMDEG-V 252 (439)
T ss_dssp -------------------TTSEEECCCCCCTTTSCGGGSCS------------------CHHHHHHHHHHHHTCCSC-E
T ss_pred -------------------CCCEEECCCCCCCHHCCCCCCCC------------------HHHHHHHHHHHHCCCCCC-C
T ss_conf -------------------77345347888804308432211------------------045669999997399998-4
Q ss_pred EEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCC
Q ss_conf 899970899-99999999999975013469995999-9932899245410655899999999976299996893999998
Q 001492 482 MILALSRPD-PKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQ 559 (1067)
Q Consensus 482 ~Il~vgRl~-~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~ 559 (1067)
+|+++||+. +.||++.+++|+..+......+++.+ |+|+++ ..+...+.+++.+++ ..+.|.|+++.
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~---------~~~~~~l~~~~~~~~--~~~~~~g~~~~ 321 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD---------PELEGWARSLEEKHG--NVKVITEMLSR 321 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCC---------HHHHHHHHHHHHHCT--TEEEECSCCCH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC---------HHHHHHHHHHHHHCC--CEEEECCCCCH
T ss_conf 7999733353436699999999999854667871899980797---------267789999875069--89997287998
Q ss_pred CCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHC-C
Q ss_conf 999999997131893999449989887899999984997999288770110014886699499999999999999631-9
Q 001492 560 YDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVS-E 638 (1067)
Q Consensus 560 ~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aL~~ll~-d 638 (1067)
+++..+|+.| |++|+||..|+||++++||||||+|||+++.||..|++.++ +|+++++.|+++++++|.++++ +
T Consensus 322 ~~~~~~~~~a----dv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~~ 396 (439)
T 3fro_A 322 EFVRELYGSV----DFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKALELS 396 (439)
T ss_dssp HHHHHHHTTC----SEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHC----CEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEECC-CEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 8999999977----99995898788618999999779976973788743168758-448968899899999999998319
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999989997099899999999999996831
Q 001492 639 KNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMR 675 (1067)
Q Consensus 639 ~~~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~~~ 675 (1067)
++.+.++++++++.++.|+|+.++++|+++|++++.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999876472999999999999999975
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=1.00 E-value=1 Score=354.10 Aligned_cols=412 Identities=24% Similarity=0.321 Sum_probs=302.7
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87239999941344346876788988877488999999999980999038999824889998787678763114799998
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPED 242 (1067)
Q Consensus 163 ~~~l~I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~~~~ 242 (1067)
.+.|||++|+.+.. |...+..+..||.++++.+|+++|+++| |+|+|+|....... . ..+
T Consensus 18 ~~mmkIl~i~~~~~----p~~~~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~-----~-~~~-------- 77 (438)
T 3c48_A 18 GSHMRVAMISMHTS----PLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATRPSQ-----G-EIV-------- 77 (438)
T ss_dssp -CCCEEEEECTTSC----TTCC-------CHHHHHHHHHHHHHHTT--CEEEEEEECCCGGG-----C-SEE--------
T ss_pred CCHHEEEEEEEECC----CCCCCCCCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCC-----C-CCC--------
T ss_conf 00203345775325----6346787887879999999999999669--97999954788777-----5-400--------
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH
Q ss_conf 98544566880999636788766755346652067789999999-99974898866259999985499986982369999
Q 001492 243 DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAH-CLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAA 321 (1067)
Q Consensus 243 ~~~~~~~~~gv~i~rip~~~~~~~l~k~~l~~~l~~f~~~~l~~-~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~a~ 321 (1067)
...+++.+++++..+. ....+..++.++..|...++.. +.. ..+||+||+|++..+..+.
T Consensus 78 -----~~~~~v~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~Div~~~~~~~~~~~~ 138 (438)
T 3c48_A 78 -----RVAENLRVINIAAGPY-EGLSKEELPTQLAAFTGGMLSFTRRE-------------KVTYDLIHSHYWLSGQVGW 138 (438)
T ss_dssp -----EEETTEEEEEECCSCS-SSCCGGGGGGGHHHHHHHHHHHHHHH-------------TCCCSEEEEEHHHHHHHHH
T ss_pred -----CCCCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHC-------------CCCCCEEEECCCCHHHHHH
T ss_conf -----2568748999247875-43236677899999999999999841-------------6899989947755789999
Q ss_pred HHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCHH
Q ss_conf 99814999699995799222579998618897455655767878678754012357799928988999997101797057
Q 001492 322 LLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVK 401 (1067)
Q Consensus 322 ~l~~~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~~~~~~~~ 401 (1067)
++++..++|+|++.|+.+......+.. +. . . ... .+...++..++.+|.++++|+...+.+...++ .++
T Consensus 139 ~~~~~~~~p~v~~~h~~~~~~~~~~~~-~~-~---~--~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g-~~~- 207 (438)
T 3c48_A 139 LLRDLWRIPLIHTAHTLAAVKNSYRDD-SD-T---P--ESE--ARRICEQQLVDNADVLAVNTQEEMQDLMHHYD-ADP- 207 (438)
T ss_dssp HHHHHHTCCEEEECSSCHHHHSCC-----C-C---H--HHH--HHHHHHHHHHHHCSEEEESSHHHHHHHHHHHC-CCG-
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCCCC-CC-C---C--CHH--HHHHHHHHHHHCCCEEEECCHHHHHHHHHHHC-CCH-
T ss_conf 999974999899942774011111002-67-7---3--157--89999999984089999847999999999858-982-
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 89999997713744578889978993999889996578999754221111247888999998612357665311699985
Q 001492 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKP 481 (1067)
Q Consensus 402 ~~~~l~~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1067)
.++.+||||+|...|.+... ......+..+...++.+
T Consensus 208 --------------------~k~~vi~ngvd~~~~~~~~~-----------------------~~~~~~r~~~~~~~~~~ 244 (438)
T 3c48_A 208 --------------------DRISVVSPGADVELYSPGND-----------------------RATERSRRELGIPLHTK 244 (438)
T ss_dssp --------------------GGEEECCCCCCTTTSCCC---------------------------CHHHHHHTTCCSSSE
T ss_pred --------------------HHEEEECCCCCCCCCCCCCC-----------------------CHHHHHHHHCCCCCCCC
T ss_conf --------------------02688269766110478662-----------------------02456688608998984
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCC
Q ss_conf 89997089999999999999975013469995999-99328992454106558999999999762999968939999989
Q 001492 482 MILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQY 560 (1067)
Q Consensus 482 ~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~ 560 (1067)
+|+++||+.+.||++.+++|+..+....+..++.| |+|+.... ......+.+++.++++.++|.|.|+++.+
T Consensus 245 ~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~-------g~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 317 (438)
T 3c48_A 245 VVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGP-------NATPDTYRHMAEELGVEKRIRFLDPRPPS 317 (438)
T ss_dssp EEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-------------CHHHHHHHHTTCTTTEEEECCCCHH
T ss_pred EEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC-------CCHHHHHHHHHHHCCCCCCEEECCCCCHH
T ss_conf 89997431566798999999999996397766699998188877-------72789999999971987868985889858
Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCHH
Q ss_conf 99999997131893999449989887899999984997999288770110014886699499999999999999631999
Q 001492 561 DVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKN 640 (1067)
Q Consensus 561 dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aL~~ll~d~~ 640 (1067)
++..+|+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.+++++++
T Consensus 318 ~~~~~~~~a----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~ 393 (438)
T 3c48_A 318 ELVAVYRAA----DIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDE 393 (438)
T ss_dssp HHHHHHHHC----SEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHC----CEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCHH
T ss_conf 899999858----9999874026875599999876998896279872577507972798799999999999999975989
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999989997099899999999999996831999
Q 001492 641 LWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRHPQ 678 (1067)
Q Consensus 641 ~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~~~~~~ 678 (1067)
.+.++++++++.++.|+|+.++++|+++|++++.+...
T Consensus 394 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 394 TRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999988579999999999999998631366
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=342.38 Aligned_cols=452 Identities=18% Similarity=0.161 Sum_probs=277.4
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCC--CCCCCCCC
Q ss_conf 6787239999941344346876788988877488999999999980999038999824889998787678--76311479
Q 001492 161 KKEKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYG--EPAEMLTG 238 (1067)
Q Consensus 161 ~~~~~l~I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~--~~~e~l~~ 238 (1067)
++...|||++|+.... |. ..+||...++..|+++|+++| |+|.|+++.+.. +..... ...+.-..
T Consensus 5 ~~~~~MkIl~vs~E~~----P~-----~K~GGLadvv~~L~~aL~~~G--~~V~Vi~P~Y~~--~~~~~~~~~~~~~~~~ 71 (536)
T 3vue_A 5 HHHHHMNVVFVGAEMA----PW-----SKTGGLGDVLGGLPPAMAANG--HRVMVISPRYDQ--YKDAWDTSVVAEIKVA 71 (536)
T ss_dssp ---CCCEEEEECSCBT----TT-----BCSSHHHHHHHHHHHHHHTTT--CEEEEEEECCSC--CTTCEEEEEEEEEEET
T ss_pred CCCCCCEEEEEEEECC----CH-----HCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCHH--HHHHCCCCEEEEEEEC
T ss_conf 6899738999987243----12-----126769999999999999769--969999048502--2242265168999836
Q ss_pred CCCC-CCCCCCCCCCEEEEECCCCCCCCCCCC------CCCCC--HHHHHHHHHHHHHH--HHHHHHHHHHC-------C
Q ss_conf 9998-985445668809996367887667553------46652--06778999999999--97489886625-------9
Q 001492 239 GPED-DGIEVGESSGAYIIRIPFGPRDKYLRK------ELLWP--YIQEFVDGALAHCL--NMSKVLGEQIG-------G 300 (1067)
Q Consensus 239 ~~~~-~~~~~~~~~gv~i~rip~~~~~~~l~k------~~l~~--~l~~f~~~~l~~~~--~~~~~l~~~~~-------~ 300 (1067)
.... +.......+|+.++.+.... +..+ ..++. ....+.+...++.. +..-.+...++ .
T Consensus 72 ~~~~~~~~~~~~~~gv~~y~id~~~---~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~ 148 (536)
T 3vue_A 72 DRYERVRFFHCYKRGVDRVFIDHPS---FLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFK 148 (536)
T ss_dssp TEEEEEEEEECEETTEEEEEEECTT---TTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCC
T ss_pred CCEEEEEEEEEEECCCEEEEECCHH---HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 8337899999997895599964755---4123346677866688756766417999999999999999973026530110
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHC-------CCCCEEEEECCCCHHHH---HHHHHHCCCCHHHHHH-----H---HH
Q ss_conf 99998549998698236999999814-------99969999579922257---9998618897455655-----7---67
Q 001492 301 GQPVWPYVIHGHYADAGDSAALLSGA-------LNVPMVLTGHSLGRNKL---EQLLKQGRQSKEDINS-----T---YK 362 (1067)
Q Consensus 301 ~~~~~pDvIh~h~~~~~~~a~~l~~~-------~giP~V~t~H~l~~~~~---~~l~~~g~~~~~~i~~-----~---y~ 362 (1067)
.....+||+|+|+|.++.++.++... .++|+|+|.|++..... ..+...+. ....... . ..
T Consensus 149 ~~~~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 227 (536)
T 3vue_A 149 GTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNL-SERFRSSFDFIDGYDTPV 227 (536)
T ss_dssp SCCCSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCC-CGGGHHHHEEEETTTSTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCC-CHHHCCHHHHHHCCCCCC
T ss_conf 1479987999776048999999998640233202563454215742245555333644189-656401033331146410
Q ss_pred HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 87867875401235779992898899999710179705789999997713744578889978993999889996578999
Q 001492 363 IMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDT 442 (1067)
Q Consensus 363 i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~ 442 (1067)
....+..++..+..||.|+|+|+...+++...+.. . .+.. ......++.+||||||.+.|.|....
T Consensus 228 ~~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~-g------------~~l~-~~~~~~~i~~I~NGiD~~~~~p~~d~ 293 (536)
T 3vue_A 228 EGRKINWMKAGILEADRVLTVSPYYAEELISGIAR-G------------CELD-NIMRLTGITGIVNGMDVSEWDPSKDK 293 (536)
T ss_dssp CEEEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCC-C------------SSSC-CCSCCCSCEECCCCCCTTTSCTTTCS
T ss_pred CCCCHHHHHHHHHHCCEEEECCHHHHHHHHCCCCC-C------------CCCC-CCCCCCCEEEEECCCCHHHCCCCCCC
T ss_conf 03304399999985367787687885343126344-5------------2200-12545781899799664214887762
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-CC---HH-HHHHHHH--CCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 754221111247888999998-61---23-5766531--16999858999708999999999999997501346999599
Q 001492 443 PEVDGELTSLIGGTDGSSPKA-IP---AI-WSDVMRF--LTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT 515 (1067)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~-~~---~~-~~~~~~~--~~~~~~~~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~ 515 (1067)
.+.... .... .. .. .....++ ...++.|+|+++||+.+.||++.+++|+..+. ...+++
T Consensus 294 -----~~~~~~------~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~--~~~~~l- 359 (536)
T 3vue_A 294 -----YITAKY------DATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELM--QEDVQI- 359 (536)
T ss_dssp -----SSSCCC------CTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHT--TSSCEE-
T ss_pred -----CCCCCC------CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH--HHCCEE-
T ss_conf -----100144------434555656777999998619987999758999965302378478999999768--549859-
Q ss_pred EEEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHC
Q ss_conf 99932899245410655899999999976299996893999998999999997131893999449989887899999984
Q 001492 516 LIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAH 595 (1067)
Q Consensus 516 lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~ 595 (1067)
+++|.++.. ....+......+ ..+|.+.+..+.+++..+|+.| |+||+||.+||||++++|||+|
T Consensus 360 ~l~G~G~~~---------~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~a----D~~v~PS~~E~fgl~~lEAma~ 424 (536)
T 3vue_A 360 VLLGTGKKK---------FEKLLKSMEEKY--PGKVRAVVKFNAPLAHLIMAGA----DVLAVPSRFEPCGLIQLQGMRY 424 (536)
T ss_dssp EEECCBCHH---------HHHHHHHHHHHS--TTTEEEECSCCHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHT
T ss_pred EEEECCCCH---------HHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHH----HEEECCCCCCCCCHHHHHHHHC
T ss_conf 999546726---------899999987616--8854999714688899999862----3425346568988899999986
Q ss_pred CCCEEECCCCCCHHHHCCCCCEE----------EECCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 99799928877011001488669----------9499999999999999631--99999999999989997099899999
Q 001492 596 GLPMVATKNGGPVDIHRALNNGL----------LVDPHDQQAIADALLKLVS--EKNLWVECRKNGWKNIHLFSWPEHCR 663 (1067)
Q Consensus 596 G~PVIat~~Gg~~eii~~~~~Gl----------lv~p~d~~~la~aL~~ll~--d~~~~~~~~~~a~~~v~~fsw~~~a~ 663 (1067)
|+|||+|+.||..|+|.++.+|+ +|+|.|+++++++|.+++. +.+.|.++.+++++ +.|||+..++
T Consensus 425 G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am~--~~fSW~~~A~ 502 (536)
T 3vue_A 425 GTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMN--QDLSWKGPAK 502 (536)
T ss_dssp TCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHH--SCCSSHHHHH
T ss_pred CCCEEECCCCCCHHEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH--HCCCHHHHHH
T ss_conf 99899907998222022798763246677751587999999999999999985295999999999877--3599999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999683
Q 001492 664 TYLTRVAACRM 674 (1067)
Q Consensus 664 ~~l~~l~~~~~ 674 (1067)
+|+++|+++..
T Consensus 503 ~y~~ly~~L~~ 513 (536)
T 3vue_A 503 NWENVLLGLGV 513 (536)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHHHHH
T ss_conf 99999998604
No 6
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=337.49 Aligned_cols=443 Identities=17% Similarity=0.164 Sum_probs=277.8
Q ss_pred EEEEEEECCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCC--CCCCC--CC
Q ss_conf 39999941344346876788988--87748899999999998099903899982488999878767876--31147--99
Q 001492 166 LYIVLISLHGLVRGENMELGRDS--DTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEP--AEMLT--GG 239 (1067)
Q Consensus 166 l~I~lis~~~~~~~~~~~~g~~~--d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~--~e~l~--~~ 239 (1067)
|||++|+.+.. | ..||.++++.+|+++|+++| |+|+|+|..... ....+... ...+. .+
T Consensus 1 MkIl~v~~~~~-----------P~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~~~--~~~~~~~~~~~~~~~~~~~ 65 (485)
T 1rzu_A 1 MNVLSVSSEIY-----------PLIKTGGLADVVGALPIALEAHG--VRTRTLIPGYPA--VKAAVTDPVKCFEFTDLLG 65 (485)
T ss_dssp CEEEEECSCBT-----------TTBCSSHHHHHHHHHHHHHHTTT--CEEEEEEECCHH--HHHHCCSCEEEEEESCSSS
T ss_pred CEEEEEEEEEC-----------CCCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCC--CCCCCCCCCEEEEEEEECC
T ss_conf 96999944651-----------56566549999999999999769--869999156443--3444356513689998308
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCC--C--CCCC--CCCCCHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 9989854456688099963678876--6--7553--4665206-778999999999974898866259999985499986
Q 001492 240 PEDDGIEVGESSGAYIIRIPFGPRD--K--YLRK--ELLWPYI-QEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGH 312 (1067)
Q Consensus 240 ~~~~~~~~~~~~gv~i~rip~~~~~--~--~l~k--~~l~~~l-~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h 312 (1067)
..........+|+.+++++....- . .... ..-|+.. ..|. .+...+.+.+ +.+ ....+|||||+|
T Consensus 66 -~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~--~~~~~~DiIh~~ 137 (485)
T 1rzu_A 66 -EKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFA----ALSLAAARIG-AGV--LPGWRPDMVHAH 137 (485)
T ss_dssp -CCEEEEEEEETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHH----HHHHHHHHHH-TTC--SSSCCCSEEEEE
T ss_pred -CEEEEEEEEECCCEEEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHH-HHH--CCCCCCCEEEEC
T ss_conf -74789999966956999848677277766558865666530679999----9999999999-986--157999889964
Q ss_pred CCCHHHHHHHHHHC--CCCCEEEEECCCCHHHH--HHHHHHCCCCHHHHH-HHHHHHHHHHHHHCCCCCCCEEEECCHHH
Q ss_conf 98236999999814--99969999579922257--999861889745565-57678786787540123577999289889
Q 001492 313 YADAGDSAALLSGA--LNVPMVLTGHSLGRNKL--EQLLKQGRQSKEDIN-STYKIMRRIEGEELSLDAAELVITSTKQE 387 (1067)
Q Consensus 313 ~~~~~~~a~~l~~~--~giP~V~t~H~l~~~~~--~~l~~~g~~~~~~i~-~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~ 387 (1067)
.+.++..+.++++. .++|+|+|.|+.+.... ...+........... ....+......++..++.+|.++++|+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~ 217 (485)
T 1rzu_A 138 DWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSY 217 (485)
T ss_dssp HHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHH
T ss_pred CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHH
T ss_conf 63055789997310358997899966754468788778734399803202000132562359998886467799608758
Q ss_pred HHHHHHH-CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999710-179-70578999999771374457888997899399988999657899975422111124788899999861
Q 001492 388 IDEQWGL-YDG-FDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIP 465 (1067)
Q Consensus 388 ~~~~~~~-~~~-~~~~~~~~l~~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (1067)
.+.+... |.. .+.- ++....++.+||||+|.+.|.+..... .... + .........
T Consensus 218 ~~~~~~~~~g~~~~~~---------------~~~~~~~~~vi~ngvd~~~~~~~~~~~-~~~~----~---~~~~~~~~~ 274 (485)
T 1rzu_A 218 AEEILTAEFGMGLEGV---------------IGSRAHVLHGIVNGIDADVWNPATDHL-IHDN----Y---SAANLKNRA 274 (485)
T ss_dssp HHHTTSHHHHTTCHHH---------------HHTTGGGEEECCCCBCTTTSCTTTCTT-SSSC----C---BTTBCTTHH
T ss_pred HHHHHCCCCCCCHHHH---------------HHHHCCCCEEECCCCCCCCCCCCCCCC-CCCC----C---CCCCHHHHH
T ss_conf 9998354357665899---------------986068816970898602058866511-0001----2---432445678
Q ss_pred -HHHHHHHHHCCCCC-CCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCHHHHHCCCHHHHHHHHHHH
Q ss_conf -23576653116999-8589997089999999999999975013469995999-99328992454106558999999999
Q 001492 466 -AIWSDVMRFLTNPH-KPMILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLI 542 (1067)
Q Consensus 466 -~~~~~~~~~~~~~~-~~~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~ 542 (1067)
.....+.++...++ .++|+++||+.+.||++.+++|+..+.. + ++.| |+|+++ ..+...+.+++
T Consensus 275 ~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~--~~~l~ivG~g~---------~~~~~~l~~~~ 341 (485)
T 1rzu_A 275 LNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--L--GGRLVVLGAGD---------VALEGALLAAA 341 (485)
T ss_dssp HHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--T--TCEEEEEECBC---------HHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--C--CCEEEEEECCC---------HHHHHHHHHHH
T ss_conf 86999999629888998399997257531287999999999872--6--95699996894---------68999999999
Q ss_pred HHCCCCCCEE-ECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCC-------
Q ss_conf 7629999689-39999989999999971318939994499898878999999849979992887701100148-------
Q 001492 543 DKYDLYGQVA-YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL------- 614 (1067)
Q Consensus 543 ~~~~l~~~V~-~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~------- 614 (1067)
.+++ ++|. |.|+ +.+++..+|+.| |++|+||..|+||++++||||||+|||+++.||..|++.++
T Consensus 342 ~~~~--~~v~~~~g~-~~~~~~~~~~~a----dv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~ 414 (485)
T 1rzu_A 342 SRHH--GRVGVAIGY-NEPLSHLMQAGC----DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALAS 414 (485)
T ss_dssp HHTT--TTEEEEESC-CHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHT
T ss_pred HHCC--CCEEEECCC-CHHHHHHHHHCC----CEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHEECCCCCCCCCC
T ss_conf 8678--868994389-979999998529----999978446887779999997799779808998311321565332345
Q ss_pred --CCEEEECCCCHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf --8669949999999999999963---1999999999999899970998999999999999968319
Q 001492 615 --NNGLLVDPHDQQAIADALLKLV---SEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 615 --~~Gllv~p~d~~~la~aL~~ll---~d~~~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~~~~ 676 (1067)
.+|+++++.|+++++++|.+++ .+++++.++++++++ +.|||+.++++|+++|+.+....
T Consensus 415 ~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~~~ 479 (485)
T 1rzu_A 415 KAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLISKG 479 (485)
T ss_dssp TCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC--
T ss_pred CCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHCCC
T ss_conf 677634867899999999999999872799999999999998--86896999999999999863799
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=333.71 Aligned_cols=447 Identities=16% Similarity=0.147 Sum_probs=277.3
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCC--CCCCCCCCCCC
Q ss_conf 3999994134434687678898887748899999999998099903899982488999878767876--31147999989
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEP--AEMLTGGPEDD 243 (1067)
Q Consensus 166 l~I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~--~e~l~~~~~~~ 243 (1067)
|||++|+.... | .+..||.++++.+|+++|+++| |+|+|+|..... ....+... ...........
T Consensus 1 MkIl~v~~~~~--------P-~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 67 (485)
T 2qzs_A 1 MQVLHVCSEMF--------P-LLKTGGLADVIGALPAAQIADG--VDARVLLPAFPD--IRRGVTDAQVVSRRDTFAGHI 67 (485)
T ss_dssp CEEEEECSCBT--------T-TBCSSHHHHHHHHHHHHHHHTT--CEEEEEEECCHH--HHHHCTTCEEEEEECCTTCCE
T ss_pred CEEEEEEEECC--------C-CCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCC--CCCCCCCCEEEEEECCCCCCE
T ss_conf 96999964104--------6-6567739999999999999749--878999447643--454345640578741568717
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCC-CC------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCH
Q ss_conf 8544566880999636788766755346-65------2067789999999999748988662599999854999869823
Q 001492 244 GIEVGESSGAYIIRIPFGPRDKYLRKEL-LW------PYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA 316 (1067)
Q Consensus 244 ~~~~~~~~gv~i~rip~~~~~~~l~k~~-l~------~~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~ 316 (1067)
.......+|+.+++++.... ..+.. .+ .+..... .+......+.+.+. .+. ...+|||||+|.+.+
T Consensus 68 ~~~~~~~~gv~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~--~~~~~Divh~~~~~~ 140 (485)
T 2qzs_A 68 TLLFGHYNGVGIYLIDAPHL---YDRPGSPYHDTNLFAYTDNVL-RFALLGWVGAEMAS-GLD--PFWRPDVVHAHDWHA 140 (485)
T ss_dssp EEEEEEETTEEEEEEECHHH---HCCSSCSSBCTTSCBCTTHHH-HHHHHHHHHHHHTT-TSS--TTCCCSEEEEETGGG
T ss_pred EEEEEEECCCEEEEEECHHH---CCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHHHH-HHC--CCCCCCEEEEECCCH
T ss_conf 99999878947999708265---068987667754577873589-99999999999999-845--678997899606213
Q ss_pred HHHHHHHH-HCCCCCEEEEECCCCHHHH--HHHHHHCCCCHHHHHH-HHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH
Q ss_conf 69999998-1499969999579922257--9998618897455655-767878678754012357799928988999997
Q 001492 317 GDSAALLS-GALNVPMVLTGHSLGRNKL--EQLLKQGRQSKEDINS-TYKIMRRIEGEELSLDAAELVITSTKQEIDEQW 392 (1067)
Q Consensus 317 ~~~a~~l~-~~~giP~V~t~H~l~~~~~--~~l~~~g~~~~~~i~~-~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~ 392 (1067)
+..+.+++ +..++|+|+|.|+...... ...+............ ...+......++..++.+|.++++|+...+.+.
T Consensus 141 ~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~ 220 (485)
T 2qzs_A 141 GLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREIT 220 (485)
T ss_dssp TTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTT
T ss_pred HHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHHHHHH
T ss_conf 37899975436899789994684135788988887649991321311123246546999998753868856889999985
Q ss_pred HH-CCCCCHHHHHHHHHHHHCCCCCCCCCC--CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHH
Q ss_conf 10-179705789999997713744578889--97899399988999657899975422111124788899999861-235
Q 001492 393 GL-YDGFDVKLEKVLRARARRGVNCHGRYM--PRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIP-AIW 468 (1067)
Q Consensus 393 ~~-~~~~~~~~~~~l~~~~~~gv~~~g~~~--~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 468 (1067)
.. +. +.. ...++. .. .++.+||||+|.+.|.+.... ... ..+ +.......+ ...
T Consensus 221 ~~~~~-~~~--~~~~~~-----------~~~~~~~~vi~ngvd~~~~~~~~~~-~~~----~~~---~~~~~~~~~~~~~ 278 (485)
T 2qzs_A 221 EPQFA-YGM--EGLLQQ-----------RHREGRLSGVLNGVDEKIWSPETDL-LLA----SRY---TRDTLEDKAENKR 278 (485)
T ss_dssp SHHHH-TTC--HHHHHH-----------HHHTTCEEECCCCCCTTTSCTTTCT-TSS----SCC---CTTCGGGGHHHHH
T ss_pred CCCCC-CCH--HHHHHH-----------HCCCCCEEEEECCCCCCCCCCCCCC-CCC----CCC---CCCCHHHHHHHHH
T ss_conf 40147-246--899985-----------0667866997469876645864442-221----236---6300657788499
Q ss_pred HHHHHHCCCC--CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEE-EEEECCCCHHHHHCCCHHHHHHHHHHHHHC
Q ss_conf 7665311699--9858999708999999999999997501346999599-999328992454106558999999999762
Q 001492 469 SDVMRFLTNP--HKPMILALSRPDPKKNITTLLKAFGECRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKY 545 (1067)
Q Consensus 469 ~~~~~~~~~~--~~~~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~ 545 (1067)
..+.++...+ +.++|+++||+.+.||++.+++|+..+.. . ++. +|+|+++ ..+...+.+++.++
T Consensus 279 ~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~--~~~l~ivG~g~---------~~~~~~l~~~~~~~ 345 (485)
T 2qzs_A 279 QLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--Q--GGQLALLGAGD---------PVLQEGFLAAAAEY 345 (485)
T ss_dssp HHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--T--TCEEEEEEEEC---------HHHHHHHHHHHHHS
T ss_pred HHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--C--CCEEEEEECCC---------HHHHHHHHHHHHHC
T ss_conf 99987198889997399996667543587999999999862--7--94899992895---------67899999999757
Q ss_pred CCCCCEE-ECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCC---------C
Q ss_conf 9999689-39999989999999971318939994499898878999999849979992887701100148---------8
Q 001492 546 DLYGQVA-YPKHHKQYDVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRAL---------N 615 (1067)
Q Consensus 546 ~l~~~V~-~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~---------~ 615 (1067)
+ ++|. |.|+ +.+++..+|+.| |++|+||..|+||++++||||||+|||+++.||..|++.++ .
T Consensus 346 ~--~~v~~~~g~-~~~~~~~~~~~a----dv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~ 418 (485)
T 2qzs_A 346 P--GQVGVQIGY-HEAFSHRIMGGA----DVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVA 418 (485)
T ss_dssp T--TTEEEEESC-CHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCC
T ss_pred C--CCEEEECCC-CHHHHHHHHHHC----CEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCC
T ss_conf 9--938994789-979999999758----899978856787679999997799779878998325521576443444666
Q ss_pred CEEEECCCCHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 669949999999999999963---1999999999999899970998999999999999968319
Q 001492 616 NGLLVDPHDQQAIADALLKLV---SEKNLWVECRKNGWKNIHLFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 616 ~Gllv~p~d~~~la~aL~~ll---~d~~~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~~~~ 676 (1067)
+|+++++.|+++++++|.+++ .+++.+.++++++++ +.|||+.++++|+++|+.+...+
T Consensus 419 ~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 419 SGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp CBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC---
T ss_pred CEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 459977899999999999999870899999999999876--32898999999999999865421
No 8
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=1.00 E-value=1 Score=324.27 Aligned_cols=372 Identities=16% Similarity=0.173 Sum_probs=278.1
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87239999941344346876788988877488999999999980999038999824889998787678763114799998
Q 001492 163 EKKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPED 242 (1067)
Q Consensus 163 ~~~l~I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~~~~ 242 (1067)
.++|||++|+.... |..||.++++..|+++| .| |+|+|++........ .
T Consensus 2 ~~~mkIl~v~~~~~-----------p~~gG~~~~~~~l~~~L--~g--~~v~v~~~~~~~~~~-------~--------- 50 (394)
T 3okp_A 2 SASRKTLVVTNDFP-----------PRIGGIQSYLRDFIATQ--DP--ESIVVFASTQNAEEA-------H--------- 50 (394)
T ss_dssp --CCCEEEEESCCT-----------TSCSHHHHHHHHHHTTS--CG--GGEEEEEECSSHHHH-------H---------
T ss_pred CCCCEEEEEECCCC-----------CCCCHHHHHHHHHHHHH--CC--CEEEEEECCCCCCCH-------H---------
T ss_conf 98866999927668-----------86551999999999985--69--768999778886424-------4---------
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHH
Q ss_conf 98544566880999636788766755346652067789999999999748988662599999854999869823699999
Q 001492 243 DGIEVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAAL 322 (1067)
Q Consensus 243 ~~~~~~~~~gv~i~rip~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~a~~ 322 (1067)
......++.+++++.... ++.. .+...+...+.+ .+||+||+|..........
T Consensus 51 ---~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~l~~~~~~--------------~~~Dvv~~~~~~~~~~~~~ 103 (394)
T 3okp_A 51 ---AYDKTLDYEVIRWPRSVM---------LPTP-TTAHAMAEIIRE--------------REIDNVWFGAAAPLALMAG 103 (394)
T ss_dssp ---HHHTTCSSEEEEESSSSC---------CSCH-HHHHHHHHHHHH--------------TTCSEEEESSCTTGGGGHH
T ss_pred ---HHCCCCCEEEEECCCCCC---------CCCH-HHHHHHHHHHHH--------------CCCCEEEECCCCHHHHHHH
T ss_conf ---433456628998456545---------5551-469999999876--------------3898899888544889999
Q ss_pred HHHCCCCC-EEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCHH
Q ss_conf 98149996-99995799222579998618897455655767878678754012357799928988999997101797057
Q 001492 323 LSGALNVP-MVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVK 401 (1067)
Q Consensus 323 l~~~~giP-~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~~~~~~~~ 401 (1067)
+.+..++| +|++.|+...... .+...++ .++..++.+|.++++|+...+.+...+.. .
T Consensus 104 ~~~~~~~~~~i~~~h~~~~~~~----------------~~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~-- 162 (394)
T 3okp_A 104 TAKQAGASKVIASTHGHEVGWS----------------MLPGSRQ--SLRKIGTEVDVLTYISQYTLRRFKSAFGS-H-- 162 (394)
T ss_dssp HHHHTTCSEEEEECCSTHHHHT----------------TSHHHHH--HHHHHHHHCSEEEESCHHHHHHHHHHHCS-S--
T ss_pred HHHHCCCCCEEEEECCCHHHHH----------------HCCHHHH--HHHHHHHHCCEEEECCHHHHHHHHHHCCC-C--
T ss_conf 9975189819999346423332----------------1220348--99999986797997688999999984189-9--
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 89999997713744578889978993999889996578999754221111247888999998612357665311699985
Q 001492 402 LEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKP 481 (1067)
Q Consensus 402 ~~~~l~~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1067)
.++.+||||+|...|.+... ......+..+...++.+
T Consensus 163 --------------------~~~~vi~ngv~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~ 199 (394)
T 3okp_A 163 --------------------PTFEHLPSGVDVKRFTPATP-----------------------EDKSATRKKLGFTDTTP 199 (394)
T ss_dssp --------------------SEEEECCCCBCTTTSCCCCH-----------------------HHHHHHHHHTTCCTTCC
T ss_pred --------------------CCEEEECCCCCHHHCCCCCC-----------------------HHHHHHHHHCCCCCCCE
T ss_conf --------------------98588369858887588772-----------------------14689998649985766
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCC
Q ss_conf 89997089999999999999975013469995999-99328992454106558999999999762999968939999989
Q 001492 482 MILALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQY 560 (1067)
Q Consensus 482 ~Il~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~ 560 (1067)
.|+++||+.+.||++.+++|+..+.. ..+++.+ |+|+++.. ..+.+++ .++.++|.|+|+++.+
T Consensus 200 ~i~~~G~~~~~Kg~~~li~a~~~l~~--~~~~~~l~i~G~g~~~-----------~~l~~~~--~~~~~~v~~~g~~~~~ 264 (394)
T 3okp_A 200 VIACNSRLVPRKGQDSLIKAMPQVIA--ARPDAQLLIVGSGRYE-----------STLRRLA--TDVSQNVKFLGRLEYQ 264 (394)
T ss_dssp EEEEESCSCGGGCHHHHHHHHHHHHH--HSTTCEEEEECCCTTH-----------HHHHHHT--GGGGGGEEEEESCCHH
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHH--HCCCEEEEEECCCHHH-----------HHHHHHH--HCCCCEEEECCCCCHH
T ss_conf 99997644134588799999999886--1898699998686479-----------9999987--5545729990789978
Q ss_pred CHHHHHHHHHCCCCEEEECCCC-------CCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHH
Q ss_conf 9999999713189399944998-------988789999998499799928877011001488669949999999999999
Q 001492 561 DVPEIYRLAAKTKGVFINPALV-------EPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALL 633 (1067)
Q Consensus 561 dv~~ly~~A~~~~dV~i~ps~~-------EgfgltllEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aL~ 633 (1067)
++..+|+.| |++|+||.. |+||++++|||++|+|||+++.|+..|++.++ +|+++++.|+++++++|.
T Consensus 265 ~~~~~~~~a----d~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~ 339 (394)
T 3okp_A 265 DMINTLAAA----DIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLI 339 (394)
T ss_dssp HHHHHHHHC----SEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHC----CEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHCC-CCEEECCCCHHHHHHHHH
T ss_conf 999999868----999945755566656555673999999759979993899737787468-856728999999999999
Q ss_pred HHHCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 963199999999999989997-0998999999999999968319
Q 001492 634 KLVSEKNLWVECRKNGWKNIH-LFSWPEHCRTYLTRVAACRMRH 676 (1067)
Q Consensus 634 ~ll~d~~~~~~~~~~a~~~v~-~fsw~~~a~~~l~~l~~~~~~~ 676 (1067)
+++++++.+.++++++++.++ +|+|+.++++|+++|+++.+..
T Consensus 340 ~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~ 383 (394)
T 3okp_A 340 ELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKL 383 (394)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC--
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
T ss_conf 99819999999999999999874799999999999999720376
No 9
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=1.00 E-value=1 Score=319.60 Aligned_cols=368 Identities=15% Similarity=0.186 Sum_probs=263.5
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 39999941344346876788988877488999999999980999038999824889998787678763114799998985
Q 001492 166 LYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGI 245 (1067)
Q Consensus 166 l~I~lis~~~~~~~~~~~~g~~~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~~~~~~~ 245 (1067)
|||++++.+.. ..||.++++.+|+++|+++| |+|++++......
T Consensus 1 MkIl~i~~~~~------------~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~---------------------- 44 (374)
T 2iw1_A 1 MIVAFCLYKYF------------PFGGLQRDFMRIASTVAARG--HHVRVYTQSWEGD---------------------- 44 (374)
T ss_dssp -CEEEECSEEC------------TTCHHHHHHHHHHHHHHHTT--CCEEEEESEECSC----------------------
T ss_pred CEEEEEEEECC------------CCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCC----------------------
T ss_conf 96999972158------------87616359999999999679--8489996489887----------------------
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 44566880999636788766755346652067789999999999748988662599999854999869823699999981
Q 001492 246 EVGESSGAYIIRIPFGPRDKYLRKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSG 325 (1067)
Q Consensus 246 ~~~~~~gv~i~rip~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 325 (1067)
..+++.+++++...... ......+ ...+.+.+.+ .+||+||+|....+..+.....
T Consensus 45 ---~~~~~~v~~~~~~~~~~-------~~~~~~~-------~~~l~~~i~~-------~~~Dvv~~~~~~~~~~~~~~~~ 100 (374)
T 2iw1_A 45 ---CPKAFELIQVPVKSHTN-------HGRNAEY-------YAWVQNHLKE-------HPADRVVGFNKMPGLDVYFAAD 100 (374)
T ss_dssp ---CCTTCEEEECCCCCSSH-------HHHHHHH-------HHHHHHHHHH-------SCCSEEEESSCCTTCSEEECCS
T ss_pred ---CCCCCEEEEECCCCCCC-------HHHHHHH-------HHHHHHHHHC-------CCCCEEEEECCCCCCEEEECCC
T ss_conf ---88774799971686443-------0167789-------9999999850-------6998899966778852130015
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC--CCCCEEEECCHHHHHHHHHHCCCCCHHHH
Q ss_conf 4999699995799222579998618897455655767878678754012--35779992898899999710179705789
Q 001492 326 ALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSL--DAAELVITSTKQEIDEQWGLYDGFDVKLE 403 (1067)
Q Consensus 326 ~~giP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~y~i~~ri~~E~~~l--~~ad~Vi~~S~~~~~~~~~~~~~~~~~~~ 403 (1067)
..+++.+.+.|+.... ....+++...+ ++..+ ..+|.++++|+...+.+...+.. +.
T Consensus 101 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~--~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~--- 159 (374)
T 2iw1_A 101 VCYAEKVAQEKGFLYR---------------LTSRYRHYAAF--ERATFEQGKSTKLMMLTDKQIADFQKHYQT-EP--- 159 (374)
T ss_dssp CCHHHHHHHHCCHHHH---------------TSHHHHHHHHH--HHHHHSTTCCCEEEESCHHHHHHHHHHHCC-CG---
T ss_pred CCCCEEEEECCCCHHH---------------HCHHHHHHHHH--HHHHHHCCCCCEEEECCHHHHHHHHHHHCC-CH---
T ss_conf 6542133303562121---------------04778999999--999864267757998698999999997189-71---
Q ss_pred HHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEE
Q ss_conf 99999771374457888997899399988999657899975422111124788899999861235766531169998589
Q 001492 404 KVLRARARRGVNCHGRYMPRMVVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMI 483 (1067)
Q Consensus 404 ~~l~~~~~~gv~~~g~~~~rv~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 483 (1067)
.++.+||||+|.+.|.+... .+.....+..+...++.++|
T Consensus 160 ------------------~~~~vi~ngv~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~i 199 (374)
T 2iw1_A 160 ------------------ERFQILPPGIYPDRKYSEQI----------------------PNSREIYRQKNGIKEQQNLL 199 (374)
T ss_dssp ------------------GGEEECCCCCCGGGSGGGSC----------------------TTHHHHHHHHTTCCTTCEEE
T ss_pred ------------------HHEEEECCCCCHHHCCCCCC----------------------HHHHHHHHHHHCCCCCCEEE
T ss_conf ------------------10688569858776176442----------------------35799999972899787299
Q ss_pred EEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCH
Q ss_conf 997089999999999999975013469995999-9932899245410655899999999976299996893999998999
Q 001492 484 LALSRPDPKKNITTLLKAFGECRPLRELANLTL-IMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDV 562 (1067)
Q Consensus 484 l~vgRl~~~Kgi~~ll~A~~~l~~l~~~~~l~l-IvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dv 562 (1067)
+++||+.+.||++.+++|+..+... ..+++.+ |+|+++. ..+..++.++++.++|.|+|+ .+++
T Consensus 200 ~~~G~~~~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~v~~~g~--~~~~ 264 (374)
T 2iw1_A 200 LQVGSDFGRKGVDRSIEALASLPES-LRHNTLLFVVGQDKP------------RKFEALAEKLGVRSNVHFFSG--RNDV 264 (374)
T ss_dssp EEECSCTTTTTHHHHHHHHHTSCHH-HHHTEEEEEESSSCC------------HHHHHHHHHHTCGGGEEEESC--CSCH
T ss_pred EEECCCHHHCCHHHHHHHHHHHHHC-CCCCEEEEEECCCCH------------HHHHHHHHHCCCCCCEEECCC--CCCH
T ss_conf 9964641013889999999986760-488669999708987------------999999997398773797788--4038
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEEC-CCCHHHHHHHHHHHHCCHHH
Q ss_conf 99999713189399944998988789999998499799928877011001488669949-99999999999996319999
Q 001492 563 PEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVD-PHDQQAIADALLKLVSEKNL 641 (1067)
Q Consensus 563 ~~ly~~A~~~~dV~i~ps~~EgfgltllEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~-p~d~~~la~aL~~ll~d~~~ 641 (1067)
..+|+.| |++|+||..|+||++++|||+||+|||+++.||..|++.++.+|++++ |.|+++++++|.+++++++.
T Consensus 265 ~~~~~~a----d~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~ 340 (374)
T 2iw1_A 265 SELMAAA----DLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPL 340 (374)
T ss_dssp HHHHHHC----SEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHC----CEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCHHH
T ss_conf 9999846----889835424775569999997799889826998044430698319967999989999999999719499
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999899970998999999999999968
Q 001492 642 WVECRKNGWKNIHLFSWPEHCRTYLTRVAACR 673 (1067)
Q Consensus 642 ~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~ 673 (1067)
++++++++++.++.|+|..+++.+.++++.++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 341 RMAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999987538999999999999863
No 10
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=1.00 E-value=1 Score=317.87 Aligned_cols=361 Identities=17% Similarity=0.257 Sum_probs=267.5
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 88774889999999999809990389998248899987876787631147999989854456688099963678876675
Q 001492 188 SDTGGQIKYVVELARALARMPGVYRVDLFSRQVSSPEVDWSYGEPAEMLTGGPEDDGIEVGESSGAYIIRIPFGPRDKYL 267 (1067)
Q Consensus 188 ~d~GG~~~~v~~LA~aLa~~G~v~~V~viT~~~~~~~v~~~y~~~~e~l~~~~~~~~~~~~~~~gv~i~rip~~~~~~~l 267 (1067)
|..||.++++.+|+++|+++| |+|++++..... .. . ...+++.++.++..... ..
T Consensus 24 p~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~-~~----~-----------------~~~~~i~~~~~~~~~~~-~~ 78 (394)
T 2jjm_A 24 PSVGGSGVVGTELGKQLAERG--HEIHFITSGLPF-RL----N-----------------KVYPNIYFHEVTVNQYS-VF 78 (394)
T ss_dssp C--CHHHHHHHHHHHHHHHTT--CEEEEECSSCC--------------------------CCCTTEEEECCCCC-----C
T ss_pred CCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCC-CC----C-----------------CCCCCEEEEECCCCCCC-CC
T ss_conf 898987899999999999689--879999688877-62----0-----------------03786289852566654-00
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCH-HHHHHHHHHCC--CCCEEEEECCCCHHHHH
Q ss_conf 5346652067789999999999748988662599999854999869823-69999998149--99699995799222579
Q 001492 268 RKELLWPYIQEFVDGALAHCLNMSKVLGEQIGGGQPVWPYVIHGHYADA-GDSAALLSGAL--NVPMVLTGHSLGRNKLE 344 (1067)
Q Consensus 268 ~k~~l~~~l~~f~~~~l~~~~~~~~~l~~~~~~~~~~~pDvIh~h~~~~-~~~a~~l~~~~--giP~V~t~H~l~~~~~~ 344 (1067)
. ...+...+...+. +.+.+ .+||+||+|+... ...+.+..+.. ++|+|++.|+.....
T Consensus 79 ~---~~~~~~~~~~~l~-------~~l~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-- 139 (394)
T 2jjm_A 79 Q---YPPYDLALASKMA-------EVAQR-------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV-- 139 (394)
T ss_dssp C---SCCHHHHHHHHHH-------HHHHH-------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT--
T ss_pred C---CCCCCHHHHHHHH-------HHHHH-------CCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--
T ss_conf 1---5652079999999-------99977-------699999972433777889998886267877799971575212--
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCE
Q ss_conf 99861889745565576787867875401235779992898899999710179705789999997713744578889978
Q 001492 345 QLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTKQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRM 424 (1067)
Q Consensus 345 ~l~~~g~~~~~~i~~~y~i~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~~~~~~~~~~~~l~~~~~~gv~~~g~~~~rv 424 (1067)
. +. . .. .++ .++..++.+|.++++|+...+.+...+.. + .++
T Consensus 140 --~--~~-~-----~~---~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--~---------------------~~~ 181 (394)
T 2jjm_A 140 --L--GS-D-----PS---LNN--LIRFGIEQSDVVTAVSHSLINETHELVKP--N---------------------KDI 181 (394)
T ss_dssp --T--TT-C-----TT---THH--HHHHHHHHSSEEEESCHHHHHHHHHHTCC--S---------------------SCE
T ss_pred --C--CC-C-----HH---HHH--HHHHHHHHCCEEEECCHHHHHHHHHHHCC--C---------------------CCE
T ss_conf --5--88-8-----77---889--99999861998999799999999985287--6---------------------567
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 99399988999657899975422111124788899999861235766531169998589997089999999999999975
Q 001492 425 VVIPPGMDFSNVVAQEDTPEVDGELTSLIGGTDGSSPKAIPAIWSDVMRFLTNPHKPMILALSRPDPKKNITTLLKAFGE 504 (1067)
Q Consensus 425 ~vIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vgRl~~~Kgi~~ll~A~~~ 504 (1067)
.+||||+|...|.+... ...+..+..+++.+.|+++||+.+.||++.+++|+..
T Consensus 182 ~vi~ngv~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~ 235 (394)
T 2jjm_A 182 QTVYNFIDERVYFKRDM--------------------------TQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAK 235 (394)
T ss_dssp EECCCCCCTTTCCCCCC--------------------------HHHHHHTTCC---CEEEEECCCCGGGTHHHHHHHHHH
T ss_pred EEECCCCCHHHCCCCCH--------------------------HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
T ss_conf 99558756876088634--------------------------8899871999888089995046653588999999999
Q ss_pred CCCCCCCCCEE-EEEECCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 01346999599-99932899245410655899999999976299996893999998999999997131893999449989
Q 001492 505 CRPLRELANLT-LIMGNRDDIEEMSSGNASVLITVLKLIDKYDLYGQVAYPKHHKQYDVPEIYRLAAKTKGVFINPALVE 583 (1067)
Q Consensus 505 l~~l~~~~~l~-lIvG~~~~~~~l~~~~~~~~~~i~~l~~~~~l~~~V~~~g~~~~~dv~~ly~~A~~~~dV~i~ps~~E 583 (1067)
+.. . +++. +|+|+++. ...+.+++.++++.++|.|.|+ .+++..+|+.| |++|+||..|
T Consensus 236 l~~--~-~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~a----dv~v~ps~~e 295 (394)
T 2jjm_A 236 IVT--E-VDAKLLLVGDGPE-----------FCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMS----DLMLLLSEKE 295 (394)
T ss_dssp HHH--S-SCCEEEEECCCTT-----------HHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTC----SEEEECCSCC
T ss_pred HHH--H-CCCEEEEECCCHH-----------HHHHHHHHHHCCCCCEEEEECC--HHHHHHHHHHC----CEEEECCCCC
T ss_conf 985--3-7978999889657-----------9999999997399875999276--66599999867----8999656667
Q ss_pred CCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HCCCHHHHH
Q ss_conf 8878999999849979992887701100148866994999999999999996319999999999998999-709989999
Q 001492 584 PFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWVECRKNGWKNI-HLFSWPEHC 662 (1067)
Q Consensus 584 gfgltllEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aL~~ll~d~~~~~~~~~~a~~~v-~~fsw~~~a 662 (1067)
+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++++++.+.++++++++.+ +.|+|+.++
T Consensus 296 ~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 375 (394)
T 2jjm_A 296 SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIV 375 (394)
T ss_dssp SCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCCHHHHHHHHCCCCEEEECCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 87268999996499889815898077763488539968999999999999997497999999999999998737999999
Q ss_pred HHHHHHHHHHHHCC
Q ss_conf 99999999968319
Q 001492 663 RTYLTRVAACRMRH 676 (1067)
Q Consensus 663 ~~~l~~l~~~~~~~ 676 (1067)
++|+++|++++...
T Consensus 376 ~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 376 SQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999666
Done!