Query 001494
Match_columns 1067
No_of_seqs 1095 out of 7479
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 02:14:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001494.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001494hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3E-114 7E-119 1113.3 65.2 910 2-1066 29-949 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.4E-61 5.3E-66 622.0 29.3 496 49-594 94-589 (968)
3 KOG1187 Serine/threonine prote 100.0 6.5E-48 1.4E-52 429.5 25.8 280 783-1066 62-350 (361)
4 KOG0581 Mitogen-activated prot 100.0 8.1E-47 1.8E-51 392.6 19.6 251 797-1063 80-334 (364)
5 KOG0575 Polo-like serine/threo 100.0 6E-46 1.3E-50 408.1 22.4 250 796-1063 18-268 (592)
6 KOG0615 Serine/threonine prote 100.0 1E-46 2.2E-51 393.0 15.3 255 795-1063 171-436 (475)
7 KOG0192 Tyrosine kinase specif 100.0 5.6E-45 1.2E-49 402.0 25.0 254 798-1066 43-301 (362)
8 KOG0595 Serine/threonine-prote 100.0 1.1E-43 2.3E-48 371.7 20.2 203 795-1005 9-218 (429)
9 KOG0598 Ribosomal protein S6 k 100.0 5.6E-44 1.2E-48 371.5 17.0 245 795-1056 24-269 (357)
10 KOG0197 Tyrosine kinases [Sign 100.0 1E-43 2.2E-48 387.6 18.0 249 798-1066 208-459 (468)
11 KOG0591 NIMA (never in mitosis 100.0 1.8E-44 4E-49 357.2 9.5 255 796-1063 19-280 (375)
12 KOG0593 Predicted protein kina 100.0 2.3E-43 5E-48 353.0 13.9 261 796-1063 2-283 (396)
13 KOG1026 Nerve growth factor re 100.0 9.7E-43 2.1E-47 398.0 18.8 255 796-1066 486-760 (774)
14 KOG0472 Leucine-rich repeat pr 100.0 3.8E-47 8.1E-52 393.0 -17.7 491 145-685 45-541 (565)
15 KOG0472 Leucine-rich repeat pr 100.0 1.4E-46 3E-51 388.7 -15.7 495 119-661 43-541 (565)
16 KOG0578 p21-activated serine/t 100.0 4.2E-42 9.1E-47 374.8 17.5 249 796-1063 273-522 (550)
17 KOG0592 3-phosphoinositide-dep 100.0 2.7E-41 5.8E-46 364.4 18.4 255 792-1064 69-338 (604)
18 KOG0659 Cdk activating kinase 100.0 7.7E-41 1.7E-45 329.8 18.0 259 796-1064 2-281 (318)
19 KOG0582 Ste20-like serine/thre 100.0 1.2E-40 2.6E-45 351.0 19.8 261 795-1063 25-292 (516)
20 KOG0597 Serine-threonine prote 100.0 3.2E-41 7E-46 362.7 15.7 248 796-1063 2-250 (808)
21 KOG0600 Cdc2-related protein k 100.0 4.6E-41 9.9E-46 359.7 16.8 262 795-1063 116-399 (560)
22 KOG4721 Serine/threonine prote 100.0 4.4E-41 9.5E-46 361.0 14.8 248 785-1067 120-367 (904)
23 KOG0616 cAMP-dependent protein 100.0 1.5E-40 3.2E-45 332.7 17.5 240 796-1056 44-284 (355)
24 KOG4194 Membrane glycoprotein 100.0 2.8E-42 6.1E-47 371.9 5.4 363 149-513 82-448 (873)
25 KOG0198 MEKK and related serin 100.0 2E-40 4.3E-45 353.6 18.2 252 796-1064 17-276 (313)
26 KOG0196 Tyrosine kinase, EPH ( 100.0 4.7E-41 1E-45 374.5 12.8 251 798-1066 631-889 (996)
27 KOG0583 Serine/threonine prote 100.0 1.3E-39 2.8E-44 363.6 23.5 253 794-1063 15-274 (370)
28 KOG0661 MAPK related serine/th 100.0 1.3E-40 2.7E-45 353.6 13.3 261 795-1064 9-291 (538)
29 KOG4194 Membrane glycoprotein 100.0 1.5E-41 3.3E-46 366.2 6.4 362 292-655 81-446 (873)
30 KOG0580 Serine/threonine prote 100.0 1.6E-40 3.5E-45 323.0 12.9 252 795-1064 21-273 (281)
31 KOG0588 Serine/threonine prote 100.0 5.9E-40 1.3E-44 360.9 18.6 250 796-1064 12-263 (786)
32 KOG0611 Predicted serine/threo 100.0 4.5E-40 9.8E-45 339.9 15.5 248 796-1063 53-302 (668)
33 KOG1095 Protein tyrosine kinas 100.0 2.6E-39 5.6E-44 383.9 24.1 254 797-1066 693-959 (1025)
34 KOG0033 Ca2+/calmodulin-depend 100.0 2.2E-41 4.7E-46 328.4 5.3 253 795-1063 10-266 (355)
35 KOG0194 Protein tyrosine kinas 100.0 7.1E-40 1.5E-44 364.4 16.4 254 796-1066 157-418 (474)
36 KOG0193 Serine/threonine prote 100.0 1.5E-39 3.3E-44 355.0 15.8 257 794-1066 390-651 (678)
37 KOG0201 Serine/threonine prote 100.0 3.7E-40 8.1E-45 347.7 10.5 250 796-1064 13-263 (467)
38 KOG0605 NDR and related serine 100.0 3.1E-39 6.7E-44 349.3 16.5 251 795-1062 140-443 (550)
39 KOG0694 Serine/threonine prote 100.0 5.7E-39 1.2E-43 356.9 18.9 245 795-1058 367-613 (694)
40 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.2E-38 4.7E-43 359.3 23.3 256 795-1066 6-332 (338)
41 KOG0599 Phosphorylase kinase g 100.0 6.5E-39 1.4E-43 315.7 15.1 255 794-1063 15-282 (411)
42 KOG0663 Protein kinase PITSLRE 100.0 7.6E-39 1.6E-43 325.0 15.2 262 795-1063 75-360 (419)
43 cd05571 STKc_PKB Catalytic dom 100.0 2.1E-38 4.5E-43 356.3 19.6 244 802-1063 1-250 (323)
44 PHA02988 hypothetical protein; 100.0 1.1E-37 2.3E-42 343.3 24.5 245 801-1066 25-277 (283)
45 KOG0585 Ca2+/calmodulin-depend 100.0 2.8E-38 6.1E-43 334.9 18.3 253 794-1063 95-371 (576)
46 cd05096 PTKc_DDR1 Catalytic do 100.0 1.2E-37 2.6E-42 347.6 24.6 261 796-1066 5-303 (304)
47 KOG3653 Transforming growth fa 100.0 3.4E-38 7.4E-43 334.9 18.8 258 796-1065 210-500 (534)
48 cd05631 STKc_GRK4 Catalytic do 100.0 1E-37 2.2E-42 344.5 22.8 253 798-1063 2-260 (285)
49 cd05612 STKc_PRKX_like Catalyt 100.0 3.3E-38 7.1E-43 349.4 18.9 247 796-1063 1-253 (291)
50 cd05585 STKc_YPK1_like Catalyt 100.0 5.2E-38 1.1E-42 351.4 19.6 241 804-1062 1-245 (312)
51 KOG0618 Serine/threonine phosp 100.0 9.2E-41 2E-45 379.8 -2.7 507 102-682 3-510 (1081)
52 KOG0618 Serine/threonine phosp 100.0 5.1E-41 1.1E-45 381.9 -5.2 505 78-634 3-510 (1081)
53 cd05595 STKc_PKB_beta Catalyti 100.0 9.8E-38 2.1E-42 350.6 20.6 244 802-1063 1-250 (323)
54 cd05593 STKc_PKB_gamma Catalyt 100.0 1.2E-37 2.5E-42 350.6 21.2 244 802-1063 1-250 (328)
55 KOG0589 Serine/threonine prote 100.0 2.8E-38 6.2E-43 344.5 15.5 252 796-1064 4-258 (426)
56 KOG1094 Discoidin domain recep 100.0 4.6E-38 9.9E-43 339.7 16.1 256 796-1066 538-802 (807)
57 PTZ00263 protein kinase A cata 100.0 8.1E-38 1.8E-42 352.2 18.8 247 796-1063 18-270 (329)
58 KOG2345 Serine/threonine prote 100.0 2.3E-38 4.9E-43 309.2 12.1 260 795-1066 20-298 (302)
59 KOG0032 Ca2+/calmodulin-depend 100.0 3.5E-37 7.6E-42 343.2 22.6 253 795-1063 34-292 (382)
60 PTZ00426 cAMP-dependent protei 100.0 1.5E-37 3.3E-42 350.4 19.2 247 796-1063 30-283 (340)
61 KOG0660 Mitogen-activated prot 100.0 1.7E-37 3.6E-42 321.7 16.4 262 794-1063 20-309 (359)
62 cd05106 PTKc_CSF-1R Catalytic 100.0 5.7E-37 1.2E-41 350.6 22.5 257 795-1066 37-370 (374)
63 cd05594 STKc_PKB_alpha Catalyt 100.0 1.8E-37 3.8E-42 349.3 18.1 244 802-1063 1-251 (325)
64 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.3E-37 5E-42 349.8 19.0 256 796-1064 1-257 (333)
65 cd05584 STKc_p70S6K Catalytic 100.0 3.8E-37 8.2E-42 346.0 20.7 244 802-1063 2-255 (323)
66 KOG0594 Protein kinase PCTAIRE 100.0 4.4E-37 9.5E-42 320.7 19.4 264 796-1064 11-302 (323)
67 KOG2052 Activin A type IB rece 100.0 7.9E-37 1.7E-41 322.0 21.4 259 795-1065 210-500 (513)
68 cd05608 STKc_GRK1 Catalytic do 100.0 8.7E-37 1.9E-41 336.1 22.8 249 804-1063 1-256 (280)
69 cd05104 PTKc_Kit Catalytic dom 100.0 8E-37 1.7E-41 349.8 23.3 256 796-1066 35-372 (375)
70 KOG0574 STE20-like serine/thre 100.0 6.1E-39 1.3E-43 319.4 4.7 248 798-1064 35-283 (502)
71 cd05588 STKc_aPKC Catalytic do 100.0 5.2E-37 1.1E-41 345.7 20.9 252 802-1063 1-261 (329)
72 cd05590 STKc_nPKC_eta Catalyti 100.0 4.1E-37 8.9E-42 345.1 19.9 239 802-1058 1-241 (320)
73 cd05618 STKc_aPKC_iota Catalyt 100.0 6.1E-37 1.3E-41 344.9 21.1 247 802-1058 1-250 (329)
74 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.3E-36 2.9E-41 332.2 23.1 252 796-1066 5-263 (266)
75 cd05591 STKc_nPKC_epsilon Cata 100.0 5.4E-37 1.2E-41 344.6 20.1 244 802-1063 1-253 (321)
76 cd05587 STKc_cPKC Catalytic do 100.0 7.6E-37 1.6E-41 343.9 21.3 244 797-1058 1-246 (324)
77 cd05589 STKc_PKN Catalytic dom 100.0 6.5E-37 1.4E-41 344.5 20.7 247 798-1063 1-256 (324)
78 KOG4257 Focal adhesion tyrosin 100.0 6E-37 1.3E-41 332.6 19.3 248 798-1065 391-646 (974)
79 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.9E-37 1.9E-41 340.3 21.4 261 795-1063 4-287 (303)
80 cd05592 STKc_nPKC_theta_delta 100.0 8.8E-37 1.9E-41 341.8 21.1 243 802-1062 1-246 (316)
81 KOG1989 ARK protein kinase fam 100.0 4.7E-37 1E-41 353.8 19.2 251 796-1065 37-308 (738)
82 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.1E-36 2.4E-41 336.8 21.4 260 796-1063 5-284 (288)
83 cd05616 STKc_cPKC_beta Catalyt 100.0 9E-37 1.9E-41 343.2 21.0 244 797-1058 1-246 (323)
84 KOG0610 Putative serine/threon 100.0 7.8E-37 1.7E-41 320.0 18.7 254 796-1063 77-391 (459)
85 PLN00034 mitogen-activated pro 100.0 1.6E-36 3.4E-41 345.5 22.7 248 796-1064 74-328 (353)
86 cd08228 STKc_Nek6 Catalytic do 100.0 2.4E-36 5.1E-41 330.7 23.2 260 796-1066 2-263 (267)
87 cd06649 PKc_MEK2 Catalytic dom 100.0 2.1E-36 4.7E-41 341.2 23.3 258 796-1064 5-301 (331)
88 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.2E-36 4.8E-41 328.6 22.5 250 796-1066 4-256 (256)
89 cd05570 STKc_PKC Catalytic dom 100.0 1E-36 2.2E-41 341.8 20.3 244 802-1063 1-251 (318)
90 cd07848 STKc_CDKL5 Catalytic d 100.0 1.2E-36 2.6E-41 336.8 20.2 261 796-1063 1-283 (287)
91 KOG1025 Epidermal growth facto 100.0 1.3E-37 2.7E-42 347.9 11.7 250 797-1065 697-954 (1177)
92 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.1E-37 6.8E-42 351.8 15.3 252 796-1064 1-285 (350)
93 cd05048 PTKc_Ror Catalytic Dom 100.0 4E-36 8.7E-41 331.9 23.7 254 796-1066 5-281 (283)
94 cd05628 STKc_NDR1 Catalytic do 100.0 1.1E-36 2.3E-41 348.1 19.5 252 796-1063 1-292 (363)
95 cd05582 STKc_RSK_N N-terminal 100.0 4E-37 8.8E-42 345.4 15.7 240 802-1060 2-245 (318)
96 cd05575 STKc_SGK Catalytic dom 100.0 7.9E-37 1.7E-41 343.6 18.0 240 802-1059 1-242 (323)
97 cd05620 STKc_nPKC_delta Cataly 100.0 1.6E-36 3.4E-41 339.7 20.3 243 802-1062 1-246 (316)
98 KOG4717 Serine/threonine prote 100.0 7.3E-37 1.6E-41 324.8 16.5 249 796-1063 18-269 (864)
99 cd05619 STKc_nPKC_theta Cataly 100.0 1.9E-36 4.2E-41 338.7 20.8 243 802-1062 1-246 (316)
100 cd05626 STKc_LATS2 Catalytic d 100.0 1.3E-36 2.7E-41 349.8 19.8 251 797-1063 2-304 (381)
101 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.2E-36 1.1E-40 343.5 24.5 257 795-1066 36-395 (400)
102 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.5E-36 7.5E-41 328.2 21.8 254 794-1066 4-259 (261)
103 cd05049 PTKc_Trk Catalytic dom 100.0 5.2E-36 1.1E-40 330.5 23.1 255 796-1066 5-279 (280)
104 cd05596 STKc_ROCK Catalytic do 100.0 1.1E-36 2.3E-41 348.1 17.9 252 795-1063 42-303 (370)
105 cd05599 STKc_NDR_like Catalyti 100.0 8.4E-37 1.8E-41 349.9 17.1 251 796-1063 1-295 (364)
106 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.7E-36 1.2E-40 325.2 22.6 251 796-1066 4-256 (256)
107 PF07714 Pkinase_Tyr: Protein 100.0 1.1E-36 2.3E-41 331.2 16.8 248 800-1065 3-259 (259)
108 cd05062 PTKc_IGF-1R Catalytic 100.0 5.9E-36 1.3E-40 329.4 23.0 256 794-1066 4-276 (277)
109 KOG0577 Serine/threonine prote 100.0 9E-38 2E-42 336.9 8.0 247 797-1063 27-277 (948)
110 cd05605 STKc_GRK4_like Catalyt 100.0 4.6E-36 1E-40 331.3 21.6 254 797-1063 1-260 (285)
111 cd08229 STKc_Nek7 Catalytic do 100.0 5.2E-36 1.1E-40 328.0 21.7 260 796-1066 2-263 (267)
112 PRK13184 pknD serine/threonine 100.0 4.8E-36 1E-40 359.8 23.3 258 796-1065 2-287 (932)
113 cd05614 STKc_MSK2_N N-terminal 100.0 2.8E-36 6.1E-41 340.9 20.0 253 797-1063 1-266 (332)
114 cd05072 PTKc_Lyn Catalytic dom 100.0 8.3E-36 1.8E-40 325.2 22.9 252 796-1066 6-259 (261)
115 cd05604 STKc_SGK3 Catalytic do 100.0 1.4E-36 3.1E-41 341.9 17.3 241 802-1060 1-243 (325)
116 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.2E-36 9E-41 338.0 21.1 247 802-1059 1-249 (327)
117 cd05615 STKc_cPKC_alpha Cataly 100.0 3.2E-36 7E-41 338.3 20.1 244 797-1058 1-246 (323)
118 cd05602 STKc_SGK1 Catalytic do 100.0 1.7E-36 3.8E-41 341.2 17.9 241 802-1060 1-243 (325)
119 KOG0658 Glycogen synthase kina 100.0 6E-37 1.3E-41 318.2 12.9 256 796-1063 24-305 (364)
120 cd05621 STKc_ROCK2 Catalytic d 100.0 1.6E-36 3.5E-41 346.0 17.7 253 795-1064 42-304 (370)
121 PHA03212 serine/threonine kina 100.0 5.7E-36 1.2E-40 343.2 22.1 252 796-1063 92-375 (391)
122 PTZ00267 NIMA-related protein 100.0 7.3E-36 1.6E-40 352.1 23.6 249 797-1063 68-322 (478)
123 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.4E-36 7.4E-41 341.7 20.1 258 797-1063 1-289 (338)
124 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.9E-35 4.1E-40 323.6 25.2 259 796-1066 2-263 (267)
125 cd05607 STKc_GRK7 Catalytic do 100.0 8.1E-36 1.8E-40 327.9 22.3 249 804-1064 1-250 (277)
126 cd05629 STKc_NDR_like_fungal C 100.0 1.4E-36 3.1E-41 349.2 17.0 252 796-1064 1-305 (377)
127 cd05603 STKc_SGK2 Catalytic do 100.0 2.3E-36 5E-41 339.7 18.2 240 802-1059 1-242 (321)
128 cd05033 PTKc_EphR Catalytic do 100.0 1.6E-35 3.5E-40 323.8 24.1 252 796-1066 4-263 (266)
129 cd05090 PTKc_Ror1 Catalytic do 100.0 1.5E-35 3.3E-40 327.1 23.9 254 796-1066 5-281 (283)
130 cd06650 PKc_MEK1 Catalytic dom 100.0 1.4E-35 3E-40 334.5 24.0 199 796-1003 5-204 (333)
131 cd07862 STKc_CDK6 Catalytic do 100.0 7.2E-36 1.5E-40 331.2 21.2 261 796-1063 1-286 (290)
132 cd05068 PTKc_Frk_like Catalyti 100.0 1.7E-35 3.8E-40 322.6 23.9 251 796-1066 6-259 (261)
133 cd05625 STKc_LATS1 Catalytic d 100.0 2.6E-36 5.6E-41 347.8 17.9 250 797-1063 2-304 (382)
134 cd05601 STKc_CRIK Catalytic do 100.0 1.1E-36 2.3E-41 344.0 14.5 252 796-1063 1-262 (330)
135 KOG4278 Protein tyrosine kinas 100.0 1.3E-36 2.9E-41 328.8 14.4 250 796-1066 267-521 (1157)
136 cd05598 STKc_LATS Catalytic do 100.0 1.4E-36 3.1E-41 349.3 15.6 253 796-1063 1-300 (376)
137 cd05054 PTKc_VEGFR Catalytic d 100.0 7.3E-36 1.6E-40 336.9 20.9 256 796-1066 7-331 (337)
138 cd05093 PTKc_TrkB Catalytic do 100.0 2.2E-35 4.8E-40 326.6 23.6 253 796-1066 5-277 (288)
139 cd06646 STKc_MAP4K5 Catalytic 100.0 2E-35 4.3E-40 323.4 22.9 254 796-1065 9-266 (267)
140 cd08529 STKc_FA2-like Catalyti 100.0 2.3E-35 4.9E-40 320.8 23.1 252 797-1064 1-253 (256)
141 PTZ00283 serine/threonine prot 100.0 1E-35 2.2E-40 350.6 21.8 255 794-1064 30-297 (496)
142 cd05059 PTKc_Tec_like Catalyti 100.0 2.6E-35 5.6E-40 320.2 23.3 251 796-1066 4-256 (256)
143 cd05051 PTKc_DDR Catalytic dom 100.0 3E-35 6.6E-40 327.2 24.2 258 795-1066 4-295 (296)
144 cd05108 PTKc_EGFR Catalytic do 100.0 2.4E-35 5.1E-40 330.9 23.5 252 796-1066 7-266 (316)
145 cd05095 PTKc_DDR2 Catalytic do 100.0 3.1E-35 6.7E-40 326.9 24.1 262 796-1066 5-295 (296)
146 cd05097 PTKc_DDR_like Catalyti 100.0 3E-35 6.5E-40 326.8 23.5 261 796-1066 5-294 (295)
147 cd05091 PTKc_Ror2 Catalytic do 100.0 2E-35 4.4E-40 326.2 22.0 253 797-1066 6-281 (283)
148 cd05084 PTKc_Fes Catalytic dom 100.0 5E-35 1.1E-39 317.2 24.5 247 802-1066 1-251 (252)
149 cd05052 PTKc_Abl Catalytic dom 100.0 4.1E-35 9E-40 320.0 23.7 252 796-1066 6-260 (263)
150 cd05094 PTKc_TrkC Catalytic do 100.0 3.2E-35 7E-40 325.8 23.1 254 796-1066 5-280 (291)
151 cd05622 STKc_ROCK1 Catalytic d 100.0 6.7E-36 1.4E-40 341.4 18.0 255 793-1064 40-304 (371)
152 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.3E-35 9.2E-40 319.3 23.1 251 796-1066 6-258 (260)
153 KOG4279 Serine/threonine prote 100.0 2E-36 4.3E-41 331.5 12.3 245 802-1063 581-831 (1226)
154 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.9E-35 1.1E-39 335.2 24.3 256 796-1066 37-397 (401)
155 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.4E-35 1.4E-39 317.9 24.1 250 796-1066 6-258 (260)
156 cd08219 STKc_Nek3 Catalytic do 100.0 3.6E-35 7.9E-40 318.9 22.1 250 797-1064 1-252 (255)
157 cd07861 STKc_CDK1_euk Catalyti 100.0 3.3E-35 7.2E-40 325.0 22.0 261 797-1063 1-281 (285)
158 cd05071 PTKc_Src Catalytic dom 100.0 4.5E-35 9.7E-40 319.3 22.6 250 796-1066 6-258 (262)
159 cd06619 PKc_MKK5 Catalytic dom 100.0 9E-35 1.9E-39 320.1 24.7 252 796-1064 1-253 (279)
160 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.2E-35 6.9E-40 328.8 21.4 260 796-1063 6-285 (309)
161 cd05116 PTKc_Syk Catalytic dom 100.0 7.5E-35 1.6E-39 316.7 23.6 245 803-1066 2-253 (257)
162 cd05061 PTKc_InsR Catalytic do 100.0 6.5E-35 1.4E-39 322.9 23.5 255 795-1066 5-276 (288)
163 cd05085 PTKc_Fer Catalytic dom 100.0 1.5E-34 3.2E-39 313.1 25.7 247 802-1066 1-249 (250)
164 cd05630 STKc_GRK6 Catalytic do 100.0 5E-35 1.1E-39 322.9 22.3 253 798-1063 2-260 (285)
165 cd05075 PTKc_Axl Catalytic dom 100.0 8.7E-35 1.9E-39 319.3 24.1 253 798-1066 1-269 (272)
166 cd06654 STKc_PAK1 Catalytic do 100.0 7E-35 1.5E-39 323.7 23.5 249 796-1063 20-269 (296)
167 cd05036 PTKc_ALK_LTK Catalytic 100.0 8.8E-35 1.9E-39 320.0 24.0 256 795-1066 5-276 (277)
168 cd05032 PTKc_InsR_like Catalyt 100.0 6E-35 1.3E-39 321.5 22.7 254 796-1066 6-276 (277)
169 cd05632 STKc_GRK5 Catalytic do 100.0 6.7E-35 1.4E-39 322.0 23.1 253 798-1063 2-260 (285)
170 cd05111 PTK_HER3 Pseudokinase 100.0 9.8E-35 2.1E-39 319.7 24.3 252 796-1066 7-266 (279)
171 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-34 2.6E-39 314.9 24.5 245 803-1066 2-253 (257)
172 cd05627 STKc_NDR2 Catalytic do 100.0 6.2E-36 1.4E-40 341.6 15.1 251 796-1063 1-292 (360)
173 cd05050 PTKc_Musk Catalytic do 100.0 8.1E-35 1.8E-39 322.3 23.5 255 795-1066 4-287 (288)
174 cd05035 PTKc_Axl_like Catalyti 100.0 1.2E-34 2.5E-39 318.5 24.4 253 798-1066 1-270 (273)
175 cd05092 PTKc_TrkA Catalytic do 100.0 8.2E-35 1.8E-39 320.6 23.2 253 796-1066 5-279 (280)
176 cd05089 PTKc_Tie1 Catalytic do 100.0 8.2E-35 1.8E-39 323.5 23.3 253 796-1066 2-273 (297)
177 cd06625 STKc_MEKK3_like Cataly 100.0 1.4E-34 3.1E-39 315.9 24.7 251 796-1064 2-260 (263)
178 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-34 2.9E-39 317.1 24.2 253 802-1066 1-268 (269)
179 KOG0596 Dual specificity; seri 100.0 9.2E-36 2E-40 321.2 14.6 255 793-1063 358-626 (677)
180 cd05053 PTKc_FGFR Catalytic do 100.0 6.6E-35 1.4E-39 323.9 22.1 255 795-1066 11-289 (293)
181 cd05586 STKc_Sck1_like Catalyt 100.0 1E-35 2.2E-40 335.9 15.7 243 804-1063 1-252 (330)
182 cd05045 PTKc_RET Catalytic dom 100.0 1.4E-34 3.1E-39 320.6 24.4 254 797-1066 1-284 (290)
183 KOG0199 ACK and related non-re 100.0 1.2E-35 2.6E-40 326.6 15.3 247 799-1064 113-368 (1039)
184 cd05088 PTKc_Tie2 Catalytic do 100.0 7.8E-35 1.7E-39 324.4 22.3 254 795-1066 6-278 (303)
185 cd05069 PTKc_Yes Catalytic dom 100.0 1.6E-34 3.5E-39 314.7 24.0 250 796-1066 6-258 (260)
186 cd05066 PTKc_EphR_A Catalytic 100.0 1.3E-34 2.9E-39 316.7 23.2 252 796-1066 4-264 (267)
187 PTZ00036 glycogen synthase kin 100.0 4.6E-35 9.9E-40 341.2 20.8 256 795-1063 65-350 (440)
188 cd08221 STKc_Nek9 Catalytic do 100.0 1.5E-34 3.2E-39 314.3 23.5 253 797-1065 1-254 (256)
189 cd07876 STKc_JNK2 Catalytic do 100.0 6.8E-35 1.5E-39 333.1 21.7 259 794-1063 19-314 (359)
190 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.2E-34 2.7E-39 323.4 23.2 255 795-1066 14-294 (304)
191 PF00069 Pkinase: Protein kina 100.0 8.3E-36 1.8E-40 325.0 13.4 254 798-1063 1-256 (260)
192 cd05055 PTKc_PDGFR Catalytic d 100.0 1.6E-34 3.5E-39 321.6 24.0 255 796-1066 35-299 (302)
193 cd06612 STKc_MST1_2 Catalytic 100.0 1.2E-34 2.6E-39 315.0 22.5 249 796-1063 3-252 (256)
194 cd05034 PTKc_Src_like Catalyti 100.0 1.7E-34 3.7E-39 314.9 23.7 252 795-1066 5-259 (261)
195 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.1E-34 2.5E-39 328.6 23.1 256 796-1066 7-337 (343)
196 cd06637 STKc_TNIK Catalytic do 100.0 6.9E-35 1.5E-39 320.1 20.7 252 794-1063 4-268 (272)
197 cd05060 PTKc_Syk_like Catalyti 100.0 2.1E-34 4.6E-39 313.2 24.3 245 802-1066 1-253 (257)
198 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.7E-34 3.7E-39 318.8 23.9 256 798-1066 6-279 (283)
199 cd06644 STKc_STK10_LOK Catalyt 100.0 2.7E-34 5.8E-39 318.7 25.6 251 796-1063 12-268 (292)
200 cd00192 PTKc Catalytic domain 100.0 1.8E-34 4E-39 314.7 23.8 248 802-1066 1-262 (262)
201 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.2E-34 2.7E-39 323.8 22.8 254 796-1066 18-297 (307)
202 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.8E-34 3.8E-39 314.4 23.5 240 802-1066 1-262 (262)
203 cd06624 STKc_ASK Catalytic dom 100.0 2E-34 4.2E-39 315.7 24.0 255 794-1063 6-264 (268)
204 cd06655 STKc_PAK2 Catalytic do 100.0 1.5E-34 3.3E-39 320.8 23.4 249 796-1063 19-268 (296)
205 cd07853 STKc_NLK Catalytic dom 100.0 5.9E-35 1.3E-39 335.2 20.7 259 797-1063 1-287 (372)
206 KOG0667 Dual-specificity tyros 100.0 3.6E-35 7.8E-40 327.5 18.2 196 796-1003 186-390 (586)
207 KOG0690 Serine/threonine prote 100.0 4.7E-36 1E-40 302.2 10.0 244 795-1056 167-411 (516)
208 cd05043 PTK_Ryk Pseudokinase d 100.0 1.5E-34 3.2E-39 318.8 23.0 256 795-1066 5-274 (280)
209 cd07868 STKc_CDK8 Catalytic do 100.0 1.3E-34 2.9E-39 325.3 23.0 194 801-1003 6-218 (317)
210 cd06643 STKc_SLK Catalytic dom 100.0 2.2E-34 4.8E-39 317.7 24.3 249 798-1063 7-261 (282)
211 cd05040 PTKc_Ack_like Catalyti 100.0 2.1E-34 4.5E-39 313.4 23.2 248 802-1066 1-256 (257)
212 KOG0607 MAP kinase-interacting 100.0 3.4E-35 7.4E-40 295.8 15.4 262 788-1063 75-360 (463)
213 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.6E-34 5.7E-39 314.7 24.0 252 796-1066 5-265 (268)
214 cd05597 STKc_DMPK_like Catalyt 100.0 6.3E-35 1.4E-39 329.1 19.5 254 796-1063 1-265 (331)
215 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.3E-34 5.1E-39 322.5 23.9 254 796-1066 12-291 (314)
216 cd06631 STKc_YSK4 Catalytic do 100.0 2.6E-34 5.6E-39 314.2 23.6 252 797-1063 1-261 (265)
217 cd05112 PTKc_Itk Catalytic dom 100.0 2.5E-34 5.3E-39 312.6 23.1 250 796-1066 4-256 (256)
218 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.7E-34 5.8E-39 317.4 23.7 260 796-1066 4-281 (284)
219 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.3E-34 7.1E-39 316.8 24.4 259 796-1066 4-281 (284)
220 cd06645 STKc_MAP4K3 Catalytic 100.0 1.7E-34 3.7E-39 316.0 21.8 252 796-1063 9-264 (267)
221 KOG0579 Ste20-like serine/thre 100.0 5.3E-36 1.2E-40 324.8 9.7 249 798-1063 34-288 (1187)
222 cd06611 STKc_SLK_like Catalyti 100.0 1.9E-34 4.1E-39 318.0 22.3 251 796-1063 5-261 (280)
223 cd06638 STKc_myosinIIIA Cataly 100.0 1.5E-34 3.1E-39 320.0 21.4 264 786-1065 8-284 (286)
224 cd06656 STKc_PAK3 Catalytic do 100.0 2.2E-34 4.8E-39 319.8 23.0 250 795-1063 18-268 (297)
225 cd06609 STKc_MST3_like Catalyt 100.0 2E-34 4.2E-39 316.8 22.3 249 796-1063 1-250 (274)
226 cd05109 PTKc_HER2 Catalytic do 100.0 2.9E-34 6.3E-39 316.2 23.6 253 795-1066 6-266 (279)
227 cd07874 STKc_JNK3 Catalytic do 100.0 9E-35 1.9E-39 331.7 20.1 260 794-1064 15-311 (355)
228 cd05039 PTKc_Csk_like Catalyti 100.0 3.9E-34 8.5E-39 311.0 24.1 248 796-1066 6-254 (256)
229 cd06615 PKc_MEK Catalytic doma 100.0 3.5E-34 7.6E-39 320.0 24.3 257 796-1064 1-287 (308)
230 cd05042 PTKc_Aatyk Catalytic d 100.0 3E-34 6.6E-39 314.3 23.1 253 802-1066 1-268 (269)
231 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.3E-34 1.1E-38 312.1 24.9 250 797-1063 1-263 (267)
232 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.8E-34 3.9E-39 319.2 21.1 253 796-1063 1-261 (286)
233 cd06613 STKc_MAP4K3_like Catal 100.0 2.7E-34 5.8E-39 313.5 22.2 253 796-1063 3-259 (262)
234 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.2E-34 6.9E-39 313.9 22.8 257 796-1063 1-263 (267)
235 PTZ00266 NIMA-related protein 100.0 1.5E-34 3.3E-39 348.0 22.0 256 794-1063 11-294 (1021)
236 cd05624 STKc_MRCK_beta Catalyt 100.0 5.9E-35 1.3E-39 329.3 17.5 254 796-1063 1-265 (331)
237 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.9E-34 6.2E-39 314.9 22.2 239 803-1066 2-274 (274)
238 cd07863 STKc_CDK4 Catalytic do 100.0 1.7E-34 3.7E-39 319.8 20.5 260 797-1063 1-284 (288)
239 cd08223 STKc_Nek4 Catalytic do 100.0 4.3E-34 9.2E-39 311.0 23.2 251 797-1063 1-253 (257)
240 KOG0983 Mitogen-activated prot 100.0 3.2E-35 7E-40 290.1 12.9 250 797-1063 93-348 (391)
241 cd05065 PTKc_EphR_B Catalytic 100.0 3.9E-34 8.6E-39 313.4 23.0 253 796-1066 4-266 (269)
242 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.6E-34 5.7E-39 318.0 21.7 260 796-1063 1-282 (286)
243 cd07875 STKc_JNK1 Catalytic do 100.0 1.9E-34 4.1E-39 330.1 21.2 259 794-1063 22-317 (364)
244 cd05047 PTKc_Tie Catalytic dom 100.0 6.4E-34 1.4E-38 311.8 24.5 247 802-1066 1-266 (270)
245 cd08218 STKc_Nek1 Catalytic do 100.0 3.3E-34 7.3E-39 311.6 22.0 250 797-1063 1-252 (256)
246 cd05623 STKc_MRCK_alpha Cataly 100.0 9.2E-35 2E-39 328.0 18.2 255 796-1064 1-266 (332)
247 cd05082 PTKc_Csk Catalytic dom 100.0 5.1E-34 1.1E-38 310.1 23.4 247 796-1066 6-254 (256)
248 cd08227 PK_STRAD_alpha Pseudok 100.0 2.5E-34 5.3E-39 324.2 21.6 259 800-1063 2-306 (327)
249 cd06640 STKc_MST4 Catalytic do 100.0 7.1E-34 1.5E-38 312.7 24.3 249 796-1064 4-253 (277)
250 cd05086 PTKc_Aatyk2 Catalytic 100.0 4E-34 8.7E-39 313.0 22.1 251 803-1065 2-266 (268)
251 cd05041 PTKc_Fes_like Catalyti 100.0 8.5E-34 1.8E-38 307.4 24.5 247 802-1066 1-250 (251)
252 PHA03207 serine/threonine kina 100.0 2.7E-34 5.9E-39 331.2 21.7 254 795-1063 91-374 (392)
253 PHA03211 serine/threonine kina 100.0 2E-34 4.3E-39 333.7 20.5 191 796-1001 169-362 (461)
254 cd05580 STKc_PKA Catalytic dom 100.0 3.5E-34 7.6E-39 317.4 21.7 247 796-1063 1-253 (290)
255 cd05058 PTKc_Met_Ron Catalytic 100.0 6.6E-34 1.4E-38 310.4 23.5 246 802-1066 1-257 (262)
256 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.8E-34 3.9E-39 313.9 18.9 240 802-1066 1-258 (258)
257 cd05073 PTKc_Hck Catalytic dom 100.0 7.3E-34 1.6E-38 309.6 23.6 251 796-1066 6-258 (260)
258 cd05574 STKc_phototropin_like 100.0 5.1E-34 1.1E-38 320.4 23.0 254 796-1063 1-288 (316)
259 cd05100 PTKc_FGFR3 Catalytic d 100.0 6.2E-34 1.3E-38 321.9 23.7 254 796-1066 12-291 (334)
260 KOG0444 Cytoskeletal regulator 100.0 2.2E-37 4.8E-42 335.3 -4.4 369 72-450 6-379 (1255)
261 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.4E-34 5.2E-39 317.7 19.6 257 796-1064 5-266 (284)
262 cd05046 PTK_CCK4 Pseudokinase 100.0 1.1E-33 2.4E-38 311.0 24.6 254 796-1066 5-274 (275)
263 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.4E-34 5.3E-39 320.5 19.6 260 796-1063 6-285 (301)
264 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.7E-34 8E-39 315.1 20.7 247 797-1063 5-252 (277)
265 cd07867 STKc_CDC2L6 Catalytic 100.0 7.3E-34 1.6E-38 319.4 23.5 194 801-1003 6-218 (317)
266 KOG0586 Serine/threonine prote 100.0 1.4E-34 3.1E-39 318.8 17.0 249 795-1063 55-305 (596)
267 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.9E-34 6.2E-39 317.7 19.8 261 796-1063 1-282 (286)
268 cd06658 STKc_PAK5 Catalytic do 100.0 3.5E-34 7.7E-39 317.2 20.4 248 798-1064 24-272 (292)
269 cd06639 STKc_myosinIIIB Cataly 100.0 6.7E-34 1.5E-38 315.4 22.4 258 790-1063 16-286 (291)
270 cd07841 STKc_CDK7 Catalytic do 100.0 5.3E-34 1.1E-38 317.5 21.5 262 797-1064 1-282 (298)
271 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.5E-34 1.6E-38 314.0 22.4 262 796-1066 4-281 (284)
272 cd06605 PKc_MAPKK Catalytic do 100.0 4.1E-34 8.9E-39 312.6 20.1 252 797-1063 2-256 (265)
273 cd08528 STKc_Nek10 Catalytic d 100.0 8.8E-34 1.9E-38 310.7 22.7 257 797-1066 1-268 (269)
274 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.6E-34 9.9E-39 315.3 20.4 257 789-1063 9-278 (282)
275 cd05057 PTKc_EGFR_like Catalyt 100.0 1.2E-33 2.6E-38 311.4 23.6 251 796-1066 7-266 (279)
276 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3E-34 6.4E-39 326.0 19.4 259 793-1063 12-297 (343)
277 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.2E-33 2.7E-38 312.5 23.7 260 797-1063 2-265 (287)
278 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 7E-34 1.5E-38 309.6 21.4 238 802-1066 1-259 (259)
279 PTZ00284 protein kinase; Provi 100.0 4.6E-34 1E-38 337.1 21.5 259 791-1063 124-437 (467)
280 cd06651 STKc_MEKK3 Catalytic d 100.0 1.6E-33 3.5E-38 308.0 24.2 251 796-1063 2-260 (266)
281 cd05609 STKc_MAST Catalytic do 100.0 5.2E-34 1.1E-38 318.3 20.7 255 796-1065 1-271 (305)
282 KOG0986 G protein-coupled rece 100.0 2.8E-35 6.1E-40 309.9 9.6 250 795-1057 184-434 (591)
283 cd05056 PTKc_FAK Catalytic dom 100.0 1.5E-33 3.3E-38 308.9 23.9 252 796-1066 6-263 (270)
284 cd08217 STKc_Nek2 Catalytic do 100.0 1.2E-33 2.7E-38 308.8 22.7 253 797-1064 1-262 (265)
285 cd06659 STKc_PAK6 Catalytic do 100.0 7.5E-34 1.6E-38 315.4 21.3 247 798-1063 23-270 (297)
286 cd06626 STKc_MEKK4 Catalytic d 100.0 2E-33 4.4E-38 307.0 24.3 252 797-1063 1-260 (264)
287 PHA03209 serine/threonine kina 100.0 9.7E-34 2.1E-38 322.5 22.6 191 794-1000 64-255 (357)
288 cd05083 PTKc_Chk Catalytic dom 100.0 1.2E-33 2.6E-38 306.8 21.9 246 796-1066 6-252 (254)
289 cd07844 STKc_PCTAIRE_like Cata 100.0 9E-34 2E-38 314.5 21.2 260 796-1063 5-287 (291)
290 cd06623 PKc_MAPKK_plant_like C 100.0 2.1E-33 4.6E-38 306.8 23.8 254 796-1064 1-256 (264)
291 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.3E-33 2.9E-38 309.8 22.1 255 797-1063 2-268 (272)
292 cd05044 PTKc_c-ros Catalytic d 100.0 1.3E-33 2.9E-38 309.3 21.7 248 802-1066 1-268 (269)
293 smart00219 TyrKc Tyrosine kina 100.0 2.3E-33 5E-38 305.3 23.3 250 798-1065 1-258 (258)
294 cd05578 STKc_Yank1 Catalytic d 100.0 6.5E-34 1.4E-38 309.7 18.8 251 797-1063 1-254 (258)
295 cd05110 PTKc_HER4 Catalytic do 100.0 1.9E-33 4E-38 313.5 22.9 252 796-1066 7-266 (303)
296 cd06608 STKc_myosinIII_like Ca 100.0 1.2E-33 2.7E-38 310.7 21.1 254 794-1063 4-271 (275)
297 cd06917 STKc_NAK1_like Catalyt 100.0 1.7E-33 3.6E-38 309.9 22.2 248 797-1063 2-254 (277)
298 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.2E-33 2.7E-38 313.3 21.2 262 794-1063 3-287 (291)
299 cd06632 STKc_MEKK1_plant Catal 100.0 2.9E-33 6.2E-38 304.6 23.6 250 797-1063 1-254 (258)
300 cd07839 STKc_CDK5 Catalytic do 100.0 6.8E-34 1.5E-38 314.3 19.0 260 797-1063 1-280 (284)
301 cd06641 STKc_MST3 Catalytic do 100.0 3.4E-33 7.3E-38 307.4 24.3 247 797-1063 5-252 (277)
302 cd06652 STKc_MEKK2 Catalytic d 100.0 3.3E-33 7.1E-38 305.4 24.0 250 796-1063 2-260 (265)
303 KOG0604 MAP kinase-activated p 100.0 2.1E-34 4.5E-39 288.2 13.0 253 794-1063 59-321 (400)
304 KOG1035 eIF-2alpha kinase GCN2 100.0 2.8E-34 6.1E-39 336.0 16.0 253 794-1063 477-870 (1351)
305 KOG4645 MAPKKK (MAP kinase kin 100.0 2.2E-35 4.7E-40 346.7 6.7 252 796-1064 1235-1494(1509)
306 KOG0444 Cytoskeletal regulator 100.0 8.7E-37 1.9E-41 330.7 -4.7 370 94-472 4-378 (1255)
307 cd07860 STKc_CDK2_3 Catalytic 100.0 1.4E-33 3E-38 311.8 20.4 261 797-1063 1-280 (284)
308 cd08220 STKc_Nek8 Catalytic do 100.0 4E-33 8.7E-38 303.1 23.6 249 797-1063 1-252 (256)
309 cd07843 STKc_CDC2L1 Catalytic 100.0 1.5E-33 3.2E-38 313.0 20.7 261 796-1063 5-289 (293)
310 cd06648 STKc_PAK_II Catalytic 100.0 3.8E-33 8.3E-38 308.0 23.6 248 797-1063 20-268 (285)
311 cd06647 STKc_PAK_I Catalytic d 100.0 2.9E-33 6.3E-38 310.2 22.6 250 796-1064 19-269 (293)
312 cd06630 STKc_MEKK1 Catalytic d 100.0 4E-33 8.7E-38 305.4 23.2 254 797-1063 1-263 (268)
313 cd07833 STKc_CDKL Catalytic do 100.0 1.4E-33 2.9E-38 312.7 19.7 260 797-1063 2-284 (288)
314 cd05572 STKc_cGK_PKG Catalytic 100.0 4.4E-33 9.6E-38 303.9 23.1 243 804-1063 1-251 (262)
315 cd05577 STKc_GRK Catalytic dom 100.0 3.9E-33 8.4E-38 306.9 22.3 247 804-1063 1-253 (277)
316 cd07836 STKc_Pho85 Catalytic d 100.0 2.8E-33 6.1E-38 309.4 21.4 261 797-1063 1-280 (284)
317 cd06614 STKc_PAK Catalytic dom 100.0 5.2E-33 1.1E-37 307.5 23.5 252 794-1063 17-269 (286)
318 cd06607 STKc_TAO Catalytic dom 100.0 5.5E-33 1.2E-37 310.5 23.6 248 796-1064 15-267 (307)
319 cd05074 PTKc_Tyro3 Catalytic d 100.0 6E-33 1.3E-37 304.8 23.4 253 798-1066 1-270 (273)
320 cd07835 STKc_CDK1_like Catalyt 100.0 2.5E-33 5.4E-38 309.6 20.3 260 798-1063 1-279 (283)
321 KOG1006 Mitogen-activated prot 100.0 1.5E-35 3.2E-40 291.6 2.2 253 798-1063 66-326 (361)
322 cd05633 STKc_GRK3 Catalytic do 100.0 5.7E-33 1.2E-37 305.4 22.9 245 803-1064 1-255 (279)
323 cd07832 STKc_CCRK Catalytic do 100.0 3.6E-33 7.9E-38 308.9 21.0 260 797-1063 1-281 (286)
324 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.7E-33 1E-37 307.5 21.9 252 796-1063 1-260 (283)
325 cd08225 STKc_Nek5 Catalytic do 100.0 3.3E-33 7.1E-38 304.0 20.2 251 797-1063 1-253 (257)
326 PHA02882 putative serine/threo 100.0 6.3E-33 1.4E-37 307.5 22.6 259 796-1066 12-294 (294)
327 cd05611 STKc_Rim15_like Cataly 100.0 4.3E-33 9.3E-38 303.6 20.3 246 802-1065 2-249 (260)
328 cd05122 PKc_STE Catalytic doma 100.0 1.6E-32 3.4E-37 297.6 24.6 249 797-1063 1-250 (253)
329 cd07837 STKc_CdkB_plant Cataly 100.0 3.7E-33 8.1E-38 310.3 20.0 263 796-1063 1-290 (295)
330 cd07842 STKc_CDK8_like Catalyt 100.0 3.5E-33 7.5E-38 313.9 19.8 263 797-1063 1-312 (316)
331 cd05579 STKc_MAST_like Catalyt 100.0 4.3E-33 9.2E-38 304.5 19.9 246 804-1065 1-255 (265)
332 cd06616 PKc_MKK4 Catalytic dom 100.0 4.2E-33 9.1E-38 308.6 20.0 254 797-1063 5-266 (288)
333 KOG0584 Serine/threonine prote 100.0 4.7E-34 1E-38 314.8 12.1 246 799-1063 43-295 (632)
334 KOG4250 TANK binding protein k 100.0 1.4E-33 2.9E-38 314.9 15.5 253 798-1056 15-296 (732)
335 PHA03210 serine/threonine kina 100.0 4.7E-33 1E-37 329.2 21.1 266 794-1063 146-453 (501)
336 KOG0666 Cyclin C-dependent kin 100.0 6.3E-34 1.4E-38 285.9 11.5 203 795-1002 23-241 (438)
337 cd07845 STKc_CDK10 Catalytic d 100.0 5.8E-33 1.3E-37 310.7 20.4 262 795-1063 6-289 (309)
338 cd06657 STKc_PAK4 Catalytic do 100.0 1.4E-32 2.9E-37 304.3 23.0 244 801-1063 25-269 (292)
339 KOG0200 Fibroblast/platelet-de 100.0 6E-33 1.3E-37 332.6 21.5 254 797-1066 297-577 (609)
340 cd06627 STKc_Cdc7_like Catalyt 100.0 2.7E-32 5.8E-37 296.2 24.6 249 797-1063 1-250 (254)
341 cd06606 STKc_MAPKKK Catalytic 100.0 2.9E-32 6.3E-37 296.8 24.9 249 797-1063 1-256 (260)
342 PLN00009 cyclin-dependent kina 100.0 7.3E-33 1.6E-37 307.6 20.2 262 796-1063 2-283 (294)
343 cd08215 STKc_Nek Catalytic dom 100.0 2.3E-32 4.9E-37 297.4 23.3 251 797-1063 1-254 (258)
344 cd05581 STKc_PDK1 Catalytic do 100.0 6E-33 1.3E-37 306.1 18.9 250 796-1063 1-276 (280)
345 KOG0696 Serine/threonine prote 100.0 5.5E-34 1.2E-38 295.6 9.7 244 795-1056 348-593 (683)
346 cd06635 STKc_TAO1 Catalytic do 100.0 1.9E-32 4.1E-37 307.3 23.1 246 798-1064 27-277 (317)
347 cd07850 STKc_JNK Catalytic dom 100.0 2.3E-32 4.9E-37 311.5 23.5 259 794-1063 14-310 (353)
348 cd05606 STKc_beta_ARK Catalyti 100.0 3E-32 6.5E-37 299.7 23.4 244 803-1063 1-254 (278)
349 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.4E-32 9.5E-37 296.3 24.3 251 796-1064 2-261 (264)
350 cd05118 STKc_CMGC Catalytic do 100.0 1.8E-32 3.8E-37 302.9 20.4 259 798-1063 1-279 (283)
351 cd07840 STKc_CDK9_like Catalyt 100.0 2.7E-32 5.8E-37 302.1 21.5 259 798-1063 1-283 (287)
352 cd08530 STKc_CNK2-like Catalyt 100.0 1.9E-32 4.1E-37 297.7 19.8 251 797-1064 1-253 (256)
353 KOG4236 Serine/threonine prote 100.0 1.4E-33 2.9E-38 300.7 10.1 245 801-1062 569-817 (888)
354 cd07852 STKc_MAPK15 Catalytic 100.0 2E-32 4.3E-37 310.2 20.3 261 795-1064 6-295 (337)
355 cd07838 STKc_CDK4_6_like Catal 100.0 5.1E-32 1.1E-36 299.8 23.2 259 798-1063 1-283 (287)
356 cd07849 STKc_ERK1_2_like Catal 100.0 1.2E-32 2.7E-37 311.5 18.4 260 795-1064 4-292 (336)
357 PHA03390 pk1 serine/threonine- 100.0 7.5E-32 1.6E-36 294.5 23.8 248 790-1063 8-261 (267)
358 cd08226 PK_STRAD_beta Pseudoki 100.0 6.3E-32 1.4E-36 304.7 23.5 255 802-1063 4-307 (328)
359 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.7E-32 3.7E-37 310.4 18.9 262 795-1064 4-291 (337)
360 cd06634 STKc_TAO2 Catalytic do 100.0 3.4E-32 7.3E-37 304.0 20.9 248 797-1064 16-267 (308)
361 cd07864 STKc_CDK12 Catalytic d 100.0 2.9E-32 6.4E-37 304.2 20.3 264 793-1063 4-298 (302)
362 cd06633 STKc_TAO3 Catalytic do 100.0 6.1E-32 1.3E-36 302.5 22.9 246 798-1063 23-272 (313)
363 cd07855 STKc_ERK5 Catalytic do 100.0 1.8E-32 4E-37 309.9 18.7 261 795-1063 4-293 (334)
364 cd07831 STKc_MOK Catalytic dom 100.0 3.9E-32 8.5E-37 299.9 20.8 256 798-1063 1-278 (282)
365 cd08216 PK_STRAD Pseudokinase 100.0 4.8E-32 1.1E-36 304.1 21.9 258 800-1063 6-294 (314)
366 KOG1024 Receptor-like protein 100.0 1.6E-32 3.4E-37 283.7 16.1 255 794-1065 282-552 (563)
367 cd05583 STKc_MSK_N N-terminal 100.0 3.4E-32 7.5E-37 301.3 20.2 256 797-1066 1-265 (288)
368 cd05613 STKc_MSK1_N N-terminal 100.0 6.1E-32 1.3E-36 299.6 22.2 253 797-1063 1-267 (290)
369 cd06618 PKc_MKK7 Catalytic dom 100.0 3.8E-32 8.3E-37 302.0 20.6 252 796-1064 15-273 (296)
370 cd05123 STKc_AGC Catalytic dom 100.0 6.9E-32 1.5E-36 292.2 21.6 242 804-1063 1-246 (250)
371 KOG0695 Serine/threonine prote 100.0 6.1E-33 1.3E-37 280.4 12.3 252 795-1056 249-502 (593)
372 cd07865 STKc_CDK9 Catalytic do 100.0 5E-32 1.1E-36 303.6 21.1 262 795-1063 11-306 (310)
373 cd07834 STKc_MAPK Catalytic do 100.0 4E-32 8.6E-37 307.1 18.9 259 797-1063 1-288 (330)
374 cd05610 STKc_MASTL Catalytic d 100.0 9.2E-32 2E-36 327.9 22.7 148 796-949 4-152 (669)
375 KOG0662 Cyclin-dependent kinas 100.0 1.4E-32 3E-37 254.6 11.5 260 797-1063 3-282 (292)
376 cd08222 STKc_Nek11 Catalytic d 100.0 7.4E-32 1.6E-36 293.8 19.4 252 797-1063 1-256 (260)
377 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.7E-32 1.9E-36 305.3 20.4 264 788-1063 9-299 (345)
378 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.1E-31 2.3E-36 302.2 20.6 260 792-1063 6-287 (328)
379 PTZ00024 cyclin-dependent prot 100.0 1.2E-31 2.7E-36 303.5 20.7 261 796-1063 8-312 (335)
380 cd07829 STKc_CDK_like Catalyti 100.0 9.3E-32 2E-36 297.0 19.2 259 798-1063 1-278 (282)
381 cd07830 STKc_MAK_like Catalyti 100.0 2.4E-31 5.2E-36 293.8 22.0 258 798-1063 1-279 (283)
382 cd07879 STKc_p38delta_MAPK13 C 100.0 1.2E-31 2.7E-36 303.9 20.0 256 795-1063 14-296 (342)
383 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.2E-31 2.5E-36 304.1 19.7 259 793-1063 12-297 (343)
384 cd07866 STKc_BUR1 Catalytic do 100.0 7.8E-32 1.7E-36 302.2 17.5 262 795-1063 7-307 (311)
385 KOG1151 Tousled-like protein k 100.0 1.9E-32 4E-37 286.4 10.8 256 796-1062 463-739 (775)
386 KOG0612 Rho-associated, coiled 100.0 9.3E-33 2E-37 320.6 9.3 252 794-1062 73-336 (1317)
387 KOG0984 Mitogen-activated prot 100.0 4.9E-32 1.1E-36 257.3 11.7 204 795-1004 45-255 (282)
388 KOG0603 Ribosomal protein S6 k 100.0 8.4E-32 1.8E-36 298.7 14.4 239 795-1063 321-562 (612)
389 KOG0587 Traf2- and Nck-interac 100.0 2.2E-31 4.8E-36 302.6 17.8 252 794-1063 17-281 (953)
390 cd07851 STKc_p38 Catalytic dom 100.0 1.3E-31 2.9E-36 303.8 15.3 258 794-1063 13-297 (343)
391 cd07857 STKc_MPK1 Catalytic do 100.0 7.3E-31 1.6E-35 296.6 20.9 258 797-1063 1-291 (332)
392 cd07854 STKc_MAPK4_6 Catalytic 100.0 3E-31 6.5E-36 300.7 17.6 257 796-1063 5-299 (342)
393 KOG0669 Cyclin T-dependent kin 100.0 1.4E-32 3E-37 268.2 3.3 261 796-1063 17-314 (376)
394 KOG0614 cGMP-dependent protein 100.0 3.8E-32 8.2E-37 289.3 5.9 246 795-1057 419-665 (732)
395 cd05576 STKc_RPK118_like Catal 100.0 1.8E-30 3.9E-35 278.2 18.8 219 807-1058 4-223 (237)
396 PLN03225 Serine/threonine-prot 100.0 1.5E-30 3.3E-35 308.7 17.9 259 794-1063 130-449 (566)
397 KOG0671 LAMMER dual specificit 100.0 2.7E-31 5.9E-36 276.0 9.4 269 783-1063 76-405 (415)
398 KOG1027 Serine/threonine prote 100.0 5.2E-30 1.1E-34 290.1 12.7 243 798-1063 511-766 (903)
399 smart00220 S_TKc Serine/Threon 100.0 5.3E-29 1.1E-33 268.1 19.9 239 808-1063 1-240 (244)
400 PLN03224 probable serine/threo 100.0 7.2E-29 1.6E-33 286.0 20.4 264 795-1063 144-499 (507)
401 KOG0664 Nemo-like MAPK-related 100.0 9.6E-31 2.1E-35 257.9 2.8 259 798-1064 55-343 (449)
402 KOG0608 Warts/lats-like serine 100.0 1.8E-29 4E-34 274.8 12.4 201 797-1003 630-873 (1034)
403 KOG1290 Serine/threonine prote 100.0 2.7E-28 5.9E-33 260.0 15.7 131 796-934 78-221 (590)
404 KOG0668 Casein kinase II, alph 100.0 4.6E-29 9.9E-34 240.4 7.9 254 794-1063 36-321 (338)
405 KOG1152 Signal transduction se 100.0 5.2E-29 1.1E-33 269.7 8.7 212 783-1002 548-770 (772)
406 KOG0576 Mitogen-activated prot 99.9 7.8E-29 1.7E-33 273.0 6.0 250 796-1063 15-270 (829)
407 KOG0665 Jun-N-terminal kinase 99.9 5.3E-28 1.2E-32 245.6 10.4 256 796-1063 17-309 (369)
408 cd00180 PKc Catalytic domain o 99.9 1.9E-26 4.2E-31 242.1 22.1 212 804-1065 1-215 (215)
409 KOG0670 U4/U6-associated splic 99.9 9.1E-27 2E-31 249.1 8.8 211 783-1003 419-637 (752)
410 KOG1167 Serine/threonine prote 99.9 2.2E-26 4.7E-31 243.3 10.5 197 791-1001 31-278 (418)
411 smart00221 STYKc Protein kinas 99.9 4.6E-25 9.9E-30 234.4 19.6 199 798-1003 1-202 (225)
412 KOG4237 Extracellular matrix p 99.9 1.1E-27 2.4E-32 249.0 -1.4 429 208-682 60-498 (498)
413 KOG1345 Serine/threonine kinas 99.9 4.5E-26 9.8E-31 225.4 9.1 249 795-1061 23-281 (378)
414 KOG4237 Extracellular matrix p 99.9 8E-28 1.7E-32 250.1 -3.7 405 74-514 68-498 (498)
415 PLN03210 Resistant to P. syrin 99.9 1E-24 2.2E-29 281.1 22.4 349 64-444 549-904 (1153)
416 PLN03210 Resistant to P. syrin 99.9 4E-24 8.7E-29 275.7 22.8 305 147-466 591-903 (1153)
417 PLN00181 protein SPA1-RELATED; 99.9 1.4E-24 3.1E-29 272.1 9.2 194 851-1063 28-264 (793)
418 smart00750 KIND kinase non-cat 99.9 1.2E-23 2.7E-28 214.1 12.8 165 880-1066 1-167 (176)
419 PRK15387 E3 ubiquitin-protein 99.9 3.6E-23 7.7E-28 246.5 14.5 266 99-432 203-468 (788)
420 PRK15387 E3 ubiquitin-protein 99.9 6E-23 1.3E-27 244.5 15.7 260 147-450 203-462 (788)
421 PRK09188 serine/threonine prot 99.9 1.4E-22 2.9E-27 224.2 15.9 166 794-976 16-195 (365)
422 KOG1165 Casein kinase (serine/ 99.9 3.2E-22 6.9E-27 204.0 16.5 254 796-1065 28-296 (449)
423 KOG1164 Casein kinase (serine/ 99.9 5.3E-22 1.2E-26 221.6 19.3 254 797-1065 19-294 (322)
424 KOG1163 Casein kinase (serine/ 99.9 1.8E-22 3.8E-27 196.8 11.2 257 795-1067 14-283 (341)
425 KOG0195 Integrin-linked kinase 99.9 4.4E-23 9.5E-28 203.9 6.6 247 798-1066 192-444 (448)
426 PRK15370 E3 ubiquitin-protein 99.9 2.2E-22 4.7E-27 241.9 13.0 279 97-413 178-461 (754)
427 KOG0590 Checkpoint kinase and 99.9 1.7E-22 3.7E-27 238.6 6.8 255 799-1063 321-584 (601)
428 COG0515 SPS1 Serine/threonine 99.9 2.9E-20 6.3E-25 210.9 23.6 260 798-1063 2-274 (384)
429 PRK15370 E3 ubiquitin-protein 99.8 1.4E-21 3.1E-26 234.8 7.8 264 121-422 178-445 (754)
430 PRK10359 lipopolysaccharide co 99.8 1.4E-20 3E-25 192.9 9.8 174 794-995 29-216 (232)
431 cd05147 RIO1_euk RIO kinase fa 99.8 4.5E-20 9.7E-25 188.1 11.8 143 801-952 2-168 (190)
432 PF14531 Kinase-like: Kinase-l 99.8 1E-19 2.3E-24 192.1 12.6 236 797-1055 13-288 (288)
433 KOG1240 Protein kinase contain 99.8 1.5E-20 3.2E-25 218.8 6.4 245 797-1064 24-291 (1431)
434 PRK12274 serine/threonine prot 99.8 6.1E-19 1.3E-23 176.3 14.5 185 799-1001 5-207 (218)
435 KOG0603 Ribosomal protein S6 k 99.8 1.6E-20 3.4E-25 209.5 3.3 227 803-1058 1-232 (612)
436 cd05145 RIO1_like RIO kinase f 99.8 6.8E-19 1.5E-23 180.5 14.5 143 801-953 2-169 (190)
437 KOG0617 Ras suppressor protein 99.8 2E-21 4.4E-26 179.5 -3.9 164 70-263 30-194 (264)
438 KOG4158 BRPK/PTEN-induced prot 99.8 3E-19 6.5E-24 186.3 10.9 195 853-1065 274-511 (598)
439 KOG0617 Ras suppressor protein 99.8 1.1E-20 2.3E-25 174.8 -2.0 163 120-288 32-195 (264)
440 KOG1166 Mitotic checkpoint ser 99.8 4.4E-18 9.6E-23 203.9 14.5 195 794-1000 696-902 (974)
441 cd00116 LRR_RI Leucine-rich re 99.7 9.1E-20 2E-24 205.1 -1.9 279 389-684 2-319 (319)
442 cd00116 LRR_RI Leucine-rich re 99.7 7.9E-20 1.7E-24 205.6 -5.1 58 149-206 2-64 (319)
443 KOG1023 Natriuretic peptide re 99.7 1.5E-17 3.2E-22 186.8 12.2 209 849-1066 1-222 (484)
444 KOG1033 eIF-2alpha kinase PEK/ 99.7 2.9E-18 6.3E-23 187.8 5.6 175 868-1062 329-510 (516)
445 PRK10345 hypothetical protein; 99.7 7.9E-17 1.7E-21 165.4 14.1 138 798-949 4-157 (210)
446 smart00090 RIO RIO-like kinase 99.7 6.8E-17 1.5E-21 170.5 12.5 147 796-953 28-200 (237)
447 cd05144 RIO2_C RIO kinase fami 99.7 2E-16 4.3E-21 163.9 13.1 149 789-953 8-177 (198)
448 PRK14879 serine/threonine prot 99.7 5.5E-16 1.2E-20 162.8 14.6 137 802-950 2-143 (211)
449 KOG0606 Microtubule-associated 99.7 4.5E-17 9.8E-22 190.4 6.7 206 796-1056 83-304 (1205)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 8.3E-16 1.8E-20 159.7 13.7 134 803-951 1-139 (199)
451 PRK09605 bifunctional UGMP fam 99.6 1.7E-15 3.6E-20 181.1 15.0 140 796-951 333-477 (535)
452 PLN03150 hypothetical protein; 99.6 2E-15 4.3E-20 181.9 10.6 155 2-181 372-527 (623)
453 cd05119 RIO RIO kinase family, 99.6 5.9E-15 1.3E-19 151.7 12.1 139 801-952 2-165 (187)
454 cd05120 APH_ChoK_like Aminogly 99.6 1E-14 2.3E-19 144.3 11.2 135 800-950 2-138 (155)
455 PRK01723 3-deoxy-D-manno-octul 99.5 5.7E-14 1.2E-18 148.7 14.0 140 800-951 35-192 (239)
456 KOG0590 Checkpoint kinase and 99.5 1E-15 2.2E-20 181.4 0.6 255 796-1062 20-284 (601)
457 KOG0532 Leucine-rich repeat (L 99.5 1.2E-15 2.5E-20 167.0 -1.5 177 94-279 72-248 (722)
458 PLN03150 hypothetical protein; 99.5 1.1E-13 2.5E-18 166.8 9.4 117 602-719 420-538 (623)
459 KOG0532 Leucine-rich repeat (L 99.4 5.6E-15 1.2E-19 161.7 -3.5 196 71-276 73-271 (722)
460 COG4886 Leucine-rich repeat (L 99.4 1.3E-13 2.9E-18 159.4 6.6 197 101-306 97-294 (394)
461 COG4886 Leucine-rich repeat (L 99.4 1.7E-13 3.7E-18 158.5 7.0 195 125-328 97-292 (394)
462 TIGR01982 UbiB 2-polyprenylphe 99.4 3.4E-12 7.3E-17 147.1 17.0 144 801-952 122-308 (437)
463 KOG0601 Cyclin-dependent kinas 99.3 1.1E-12 2.5E-17 147.5 7.5 248 797-1063 115-378 (524)
464 KOG1266 Protein kinase [Signal 99.3 2.3E-12 4.9E-17 132.5 6.5 199 848-1063 120-330 (458)
465 KOG1909 Ran GTPase-activating 99.3 3.1E-13 6.8E-18 140.5 -0.5 186 475-660 87-310 (382)
466 PRK04750 ubiB putative ubiquin 99.3 3.3E-11 7.1E-16 140.0 16.0 146 796-952 120-315 (537)
467 KOG1243 Protein kinase [Genera 99.3 5.9E-11 1.3E-15 134.6 14.5 168 816-998 33-200 (690)
468 KOG1909 Ran GTPase-activating 99.2 1.5E-12 3.2E-17 135.6 -1.0 186 499-684 87-310 (382)
469 cd05151 ChoK Choline Kinase (C 99.2 5.6E-11 1.2E-15 120.0 10.2 131 801-950 3-136 (170)
470 KOG1259 Nischarin, modulator o 99.2 5.8E-12 1.3E-16 127.5 1.3 108 237-350 280-387 (490)
471 PF14580 LRR_9: Leucine-rich r 99.2 1.9E-11 4.1E-16 120.5 3.9 126 550-679 17-147 (175)
472 cd05146 RIO3_euk RIO kinase fa 99.1 8.4E-10 1.8E-14 111.2 14.7 139 802-952 3-175 (197)
473 KOG0531 Protein phosphatase 1, 99.1 7.7E-12 1.7E-16 144.7 -0.2 247 94-354 69-322 (414)
474 KOG0601 Cyclin-dependent kinas 99.1 4E-11 8.6E-16 135.2 5.1 246 794-1064 263-514 (524)
475 KOG1259 Nischarin, modulator o 99.1 1E-11 2.2E-16 125.8 0.2 130 191-326 282-412 (490)
476 KOG0531 Protein phosphatase 1, 99.1 7.6E-12 1.7E-16 144.8 -0.7 247 118-378 69-322 (414)
477 COG4248 Uncharacterized protei 99.1 2.9E-09 6.2E-14 113.7 18.3 255 799-1065 14-297 (637)
478 KOG3207 Beta-tubulin folding c 99.1 9.3E-12 2E-16 133.1 -0.4 137 477-613 143-284 (505)
479 KOG3207 Beta-tubulin folding c 99.1 1.4E-11 3E-16 131.7 -1.9 158 479-636 120-283 (505)
480 COG3642 Mn2+-dependent serine/ 99.1 1.9E-09 4.2E-14 103.9 12.5 134 802-950 2-140 (204)
481 PF14580 LRR_9: Leucine-rich r 99.0 1.5E-10 3.3E-15 114.1 4.8 105 361-469 19-126 (175)
482 cd05154 ACAD10_11_like Acyl-Co 99.0 1.3E-09 2.9E-14 115.4 12.2 143 802-950 4-206 (223)
483 KOG3087 Serine/threonine prote 99.0 1.8E-09 3.9E-14 103.2 10.9 146 800-950 11-165 (229)
484 KOG0606 Microtubule-associated 99.0 9.4E-11 2E-15 138.4 2.2 249 796-1059 804-1084(1205)
485 KOG4658 Apoptotic ATPase [Sign 99.0 2.9E-10 6.4E-15 139.8 4.9 85 93-178 567-651 (889)
486 KOG4658 Apoptotic ATPase [Sign 99.0 3.5E-10 7.5E-15 139.2 4.5 205 70-280 520-732 (889)
487 PF08263 LRRNT_2: Leucine rich 98.8 2.5E-09 5.4E-14 79.1 3.4 41 2-45 3-43 (43)
488 PF01163 RIO1: RIO1 family; I 98.8 4.1E-08 8.8E-13 98.8 11.6 129 811-952 1-157 (188)
489 PRK15123 lipopolysaccharide co 98.7 1.3E-07 2.9E-12 101.1 14.1 144 802-950 28-194 (268)
490 PF13855 LRR_8: Leucine rich r 98.7 1.4E-08 2.9E-13 82.4 4.6 59 266-324 2-60 (61)
491 PF13855 LRR_8: Leucine rich r 98.7 2.1E-08 4.7E-13 81.2 4.5 60 242-301 2-61 (61)
492 KOG1859 Leucine-rich repeat pr 98.6 1.3E-09 2.8E-14 123.2 -6.1 203 479-689 83-296 (1096)
493 COG0478 RIO-like serine/threon 98.6 4.1E-07 8.8E-12 93.4 11.3 139 798-951 93-252 (304)
494 KOG1859 Leucine-rich repeat pr 98.6 2.2E-09 4.7E-14 121.4 -5.9 128 529-662 165-293 (1096)
495 KOG3741 Poly(A) ribonuclease s 98.5 2.6E-06 5.6E-11 94.3 17.3 170 808-1000 288-475 (655)
496 PRK09902 hypothetical protein; 98.5 1.9E-06 4E-11 87.0 12.7 141 804-950 26-179 (216)
497 KOG2137 Protein kinase [Signal 98.4 7.5E-08 1.6E-12 110.4 2.2 147 905-1063 106-264 (700)
498 COG5238 RNA1 Ran GTPase-activa 98.4 3.8E-08 8.2E-13 99.2 -0.9 114 574-688 155-288 (388)
499 KOG4579 Leucine-rich repeat (L 98.4 1.1E-08 2.4E-13 92.5 -4.3 132 74-210 28-163 (177)
500 PF06293 Kdo: Lipopolysacchari 98.4 2.2E-06 4.8E-11 88.9 11.6 106 840-951 56-171 (206)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.1e-114 Score=1113.26 Aligned_cols=910 Identities=36% Similarity=0.552 Sum_probs=565.1
Q ss_pred hHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCcCCcceeeEEcCCCCceeeeeeecccccccccCCcCCCCCCcceEecc
Q 001494 2 EEAHALLRWKTSLQNHNNGSPLSSWTFNNVTKIGSCAWVGIHCNHGGRVNSINLTSIGLKGTLHDFSFSSFPHLAYLDLW 81 (1067)
Q Consensus 2 ~~~~all~~k~~~~~~~~~~~l~sW~~~~~~~~~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~l~~L~L~ 81 (1067)
+|++||++||+++.+ +.+.+++|+. ..+||.|.||+|+..++|+.++|.++++.|.++ ..|..+++|++|+|+
T Consensus 29 ~~~~~l~~~~~~~~~--~~~~~~~w~~----~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~-~~~~~l~~L~~L~Ls 101 (968)
T PLN00113 29 EELELLLSFKSSIND--PLKYLSNWNS----SADVCLWQGITCNNSSRVVSIDLSGKNISGKIS-SAIFRLPYIQTINLS 101 (968)
T ss_pred HHHHHHHHHHHhCCC--CcccCCCCCC----CCCCCcCcceecCCCCcEEEEEecCCCccccCC-hHHhCCCCCCEEECC
Confidence 689999999999963 2347899974 357999999999877888887777666666553 245556666666666
Q ss_pred CCccccCCCCccc-ccCccceeecCCCcccCCCCcccccccccceecccccccccCCCCccccccccccccccccccccc
Q 001494 82 SNQLFGNIPPQIG-NISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDI 160 (1067)
Q Consensus 82 ~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 160 (1067)
+|++.|.+|..+. ++++|++|+|++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+.+.
T Consensus 102 ~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 179 (968)
T PLN00113 102 NNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGK 179 (968)
T ss_pred CCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCccccc
Confidence 6666655555443 556666666666666555553 3455555555555555555554444444444444444444444
Q ss_pred cCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccccCCCCCcccccceeecccCcCCCCCCcccCCc
Q 001494 161 IPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNL 240 (1067)
Q Consensus 161 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 240 (1067)
+|..++++++|++|+|++|++++.+| ..++++++|++|+|++|++++.+|..++++
T Consensus 180 ~p~~~~~l~~L~~L~L~~n~l~~~~p------------------------~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l 235 (968)
T PLN00113 180 IPNSLTNLTSLEFLTLASNQLVGQIP------------------------RELGQMKSLKWIYLGYNNLSGEIPYEIGGL 235 (968)
T ss_pred CChhhhhCcCCCeeeccCCCCcCcCC------------------------hHHcCcCCccEEECcCCccCCcCChhHhcC
Confidence 44444444444444444444444444 444444444444444444444444444444
Q ss_pred ccCCceEecCcccccccCccccCccceeeEEEecccccccCCCccccCCcccEEEeccccccCCccccccCCccccEEec
Q 001494 241 KYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIAFLFL 320 (1067)
Q Consensus 241 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 320 (1067)
++|++|++++|.+++.+|..++++++|+.|++++|++++.+|..+.++++|+.|++++|++.+.+|..+.++++|++|++
T Consensus 236 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l 315 (968)
T PLN00113 236 TSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHL 315 (968)
T ss_pred CCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEEC
Confidence 44444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred cCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeEEccCCcCccccCcccCCCCCCCEEEccCCccccc
Q 001494 321 DSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLSGSIPCEIGNLKSLSYLNLAFNKLTSS 400 (1067)
Q Consensus 321 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 400 (1067)
++|.+.+..|..+..+++|+.|++++|++++.+|..++.+++|+.|++++|.+++.+|.++..+++|+.|++++|++.+.
T Consensus 316 ~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~ 395 (968)
T PLN00113 316 FSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGE 395 (968)
T ss_pred CCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEeccc
Confidence 44444444444444444444455544444444444444444444444444444444444444444455555555555444
Q ss_pred CCCccccccCCcEEEcccCcCcccCchhhhCcCCCcEEeCCCCcccCCCCCCCCCCcccEEeccCcccccccccccccCC
Q 001494 401 IPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVKLTKLFLGDNQFQGPIPNLKNLTSLVRVHLDRNYLTSNISESFYIYP 480 (1067)
Q Consensus 401 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 480 (1067)
+|..+..+++|+.|++++|++++..|..|..++.|+.|++++|.+
T Consensus 396 ~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l----------------------------------- 440 (968)
T PLN00113 396 IPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNL----------------------------------- 440 (968)
T ss_pred CCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcc-----------------------------------
Confidence 444444444444444444444444444443333333333333333
Q ss_pred ceeEEEcccccccCCCCCCCCCCCCcceEeccCCccCCCCCCcccCCCCCcEEEcCCCcccCcCcccccCCCccceeecc
Q 001494 481 NLTFIDLSYNNLYGEISSDWGRCPKLGALDFSKNNITGNIPPKIGYSSQLEVLDLSSNHVVGDIPAELGKLSFLIKLILA 560 (1067)
Q Consensus 481 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 560 (1067)
++.++..+..++ +|+.|+|++|++.+..|..+
T Consensus 441 ------------~~~~~~~~~~l~------------------------~L~~L~L~~n~~~~~~p~~~------------ 472 (968)
T PLN00113 441 ------------QGRINSRKWDMP------------------------SLQMLSLARNKFFGGLPDSF------------ 472 (968)
T ss_pred ------------cCccChhhccCC------------------------CCcEEECcCceeeeecCccc------------
Confidence 222222222233 33333333333333222211
Q ss_pred cccccCCccccccccccccEEEccCCCCCCCcccccccccccceecccCcccccccchhhhhccccceeccccccCCCcc
Q 001494 561 QNQLSGQLSPKLGLLVQLEHLDLSSNNLSNAIPESLGNLVKLHYLNLSNNQFSWEIPIKLEELIHLSELDLSYNFLGRAI 640 (1067)
Q Consensus 561 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 640 (1067)
...+|+.||+++|++++..|..|..+++|++|+|++|++++.+|..+..+++|++|+|++|.+++.+
T Consensus 473 -------------~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 539 (968)
T PLN00113 473 -------------GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQI 539 (968)
T ss_pred -------------ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccC
Confidence 1134666777777777777777777778888888888888888888888888888888888888888
Q ss_pred hhhhhcccccccccccccccccccccccccCccccEEEcccCcCCCCCCCCCcccCCCcccccCCCCccCCC--CCCCCc
Q 001494 641 PSQICIMQSLEKLNLSHNSLSGVIPRCFEEMHALQCIDISYNELRGPIPNSTAFRDAPIKALQGNKGLCGDF--KGLPSC 718 (1067)
Q Consensus 641 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~--~~~~~c 718 (1067)
|..+..+++|+.|+|++|++++.+|..+..+++|+.+++++|++.|.+|...+|..+...++.|||++|+.. .+.++|
T Consensus 540 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c 619 (968)
T PLN00113 540 PASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPC 619 (968)
T ss_pred ChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCC
Confidence 888999999999999999999999999999999999999999999999999999999999999999999854 346678
Q ss_pred cccccCccccceEEEeehhHHHHHHHHHHHHhheeeeEEeecccccccCCCCCCCCCCcccc-cccCcccHHHHHHHhcC
Q 001494 719 KALKSNKQASRKIWIVVLFPLLGIVALLISLIGLFFKFQRRKNKSQTKQSSPRNTPGLRSML-TFEGKIVYEEIIRATND 797 (1067)
Q Consensus 719 ~~~~~~~~~~~~~~~iv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 797 (1067)
... .+....+. +++++++++++++++++++++++++++...++.............. ........++ ....
T Consensus 620 ~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 691 (968)
T PLN00113 620 KRV----RKTPSWWF-YITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIND---ILSS 691 (968)
T ss_pred ccc----cccceeee-ehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHH---HHhh
Confidence 532 11223333 3333333333333333333332322221111111000000000000 0001122233 3346
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|...++||+|+||.||+|+. .+++.||||++...... ..+|++.+++++|||||+++|+|.+++..|+||||
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 77888999999999999976 57899999998643211 12468889999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++|+|.++++ .++|.++.+|+.|+++|++|||.++.++|+||||||+||+++.++.+++. ||.+......
T Consensus 765 ~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-- 835 (968)
T PLN00113 765 IEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-- 835 (968)
T ss_pred CCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--
Confidence 99999999994 27899999999999999999997666699999999999999999988875 6665433221
Q ss_pred ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccch------hhhhhhhhccCCCCCCCC
Q 001494 957 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL------NLNIALDEILDPRLPIPS 1030 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 1030 (1067)
....+|+.|||||++.+..++.++|||||||++|||+||+.||+.......... ........+.++......
T Consensus 836 --~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (968)
T PLN00113 836 --TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV 913 (968)
T ss_pred --CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC
Confidence 223678999999999999999999999999999999999999853221110000 001112233444443322
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1031 HNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1031 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....++..++.+++.+||+.||++||||+||++.|+
T Consensus 914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~ 949 (968)
T PLN00113 914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLE 949 (968)
T ss_pred CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHH
Confidence 333456667899999999999999999999999986
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.4e-61 Score=622.01 Aligned_cols=496 Identities=39% Similarity=0.584 Sum_probs=367.6
Q ss_pred ceeeeeeecccccccccCCcCCCCCCcceEeccCCccccCCCCcccccCccceeecCCCcccCCCCcccccccccceecc
Q 001494 49 RVNSINLTSIGLKGTLHDFSFSSFPHLAYLDLWSNQLFGNIPPQIGNISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHL 128 (1067)
Q Consensus 49 ~v~~l~l~~~~l~g~l~~~~~~~~~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 128 (1067)
....++|.++.+.|.++...|..+++|++|+|++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|
T Consensus 94 ~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 171 (968)
T PLN00113 94 YIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDL 171 (968)
T ss_pred CCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEEC
Confidence 5677899999999999988888999999999999999999886 57899999999999999999999999999999999
Q ss_pred cccccccCCCCccccccccccccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccc
Q 001494 129 FKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGS 208 (1067)
Q Consensus 129 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 208 (1067)
++|.+.+.+|..++++++|++|+|++|.+.+.+|..++++++|++|+|++|++++.+|..++++++|++|++++|.+++.
T Consensus 172 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 251 (968)
T PLN00113 172 GGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGP 251 (968)
T ss_pred ccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEecccccccCCCccccC
Q 001494 209 IPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNL 288 (1067)
Q Consensus 209 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 288 (1067)
+|..++++++|+.|+|++|++.+.+|..+.++++|+.|++++|.+++.+|..+.++++|+.|++++|.+++.+|..+.++
T Consensus 252 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l 331 (968)
T PLN00113 252 IPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL 331 (968)
T ss_pred cChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcC
Confidence 99999999999999999999888888888888888888888888888888878888888888888888877777777777
Q ss_pred CcccEEEeccccccCCccccccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeEEc
Q 001494 289 KFLSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFI 368 (1067)
Q Consensus 289 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 368 (1067)
++|+.|++++|.+.+.+|..++.+++|+.|++++|++.+..|..+..+++|+.|++++|++.+.+|..++.+++|+.|++
T Consensus 332 ~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L 411 (968)
T PLN00113 332 PRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRL 411 (968)
T ss_pred CCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEEC
Confidence 77777777777777666666666666666666666666665655555556666666666665555555555555555555
Q ss_pred cCCcCccccCcccCCCCCCCEEEccCCcccccCCCccccccCCcEEEcccCcCcccCchhhhCcCCCcEEeCCCCcccCC
Q 001494 369 YNNSLSGSIPCEIGNLKSLSYLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVKLTKLFLGDNQFQGP 448 (1067)
Q Consensus 369 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 448 (1067)
++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..+
T Consensus 412 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~------------------- 472 (968)
T PLN00113 412 QDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF------------------- 472 (968)
T ss_pred cCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-------------------
Confidence 5555555555555555555555555555555544444444444444444444443333322
Q ss_pred CCCCCCCCcccEEeccCcccccccccccccCCceeEEEcccccccCCCCCCCCCCCCcceEeccCCccCCCCCCcccCCC
Q 001494 449 IPNLKNLTSLVRVHLDRNYLTSNISESFYIYPNLTFIDLSYNNLYGEISSDWGRCPKLGALDFSKNNITGNIPPKIGYSS 528 (1067)
Q Consensus 449 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~ 528 (1067)
. .++|+.|||++|++++..|..+..+++|+.|++++|.+.+.+|..+..++
T Consensus 473 -----~------------------------~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 523 (968)
T PLN00113 473 -----G------------------------SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCK 523 (968)
T ss_pred -----c------------------------cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCcc
Confidence 1 13345555555555555555555555555666666666555555555566
Q ss_pred CCcEEEcCCCcccCcCcccccCCCccceeecccccccCCccccccccccccEEEccCCCCCCCccc
Q 001494 529 QLEVLDLSSNHVVGDIPAELGKLSFLIKLILAQNQLSGQLSPKLGLLVQLEHLDLSSNNLSNAIPE 594 (1067)
Q Consensus 529 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 594 (1067)
+|++|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+..+.+|+.|++++|++++.+|.
T Consensus 524 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~ 589 (968)
T PLN00113 524 KLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPS 589 (968)
T ss_pred CCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCC
Confidence 666666666666666666666666666666666666666666666666666666666666655553
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-48 Score=429.50 Aligned_cols=280 Identities=41% Similarity=0.693 Sum_probs=235.6
Q ss_pred cCcccHHHHHHHhcCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeE
Q 001494 783 EGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 862 (1067)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 862 (1067)
...+.++++..||++|....+||+|+||.||+|...+|+.||||++....... .++|..|++++.+++|||+|+++|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE
Confidence 34688999999999999999999999999999999999999999886543321 466999999999999999999999
Q ss_pred EEeeCC-ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeE
Q 001494 863 FCSHAQ-HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEAR 941 (1067)
Q Consensus 863 ~~~~~~-~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~k 941 (1067)
||.+.+ +.++|||||++|+|+++++..... +++|.+|++||.++|+||+|||+.+.|+||||||||+|||+|+++++|
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999999 599999999999999999765544 799999999999999999999999988999999999999999999999
Q ss_pred EeccccceecCCCCCccccc-cccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccc-------cccchh
Q 001494 942 VSDFGIAKFLKPDSSNWTEL-AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLI-------SSSSLN 1013 (1067)
Q Consensus 942 l~DfG~a~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~-------~~~~~~ 1013 (1067)
|+|||+|+............ .||.+|+|||++..+..+.|+|||||||++.|++||+.|.+..... +.....
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 99999996544312222222 8999999999999999999999999999999999999987743211 111122
Q ss_pred hhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1014 LNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
......+++|+++........+...++..++.+|++.+|.+||+|.||+++|+
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 22267788888876322211256777999999999999999999999999874
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-47 Score=392.57 Aligned_cols=251 Identities=29% Similarity=0.447 Sum_probs=213.7
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-ceeEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ-HSFIVY 874 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 874 (1067)
+.+..+.||+|..|+||+++++ +++.+|+|++... .+...++++.+|+++++..+||+||.++|+|...+ ..+++|
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 4566788999999999999765 7899999999543 34556789999999999999999999999999999 499999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHN-DCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||++|+|++++... +.+++....+|+.++++||.|||+ + +||||||||+|||++..|+|||||||.++.+..
T Consensus 158 EYMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn 231 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN 231 (364)
T ss_pred hhcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence 999999999999654 458999999999999999999996 6 999999999999999999999999999987764
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC-CCCCCCcc
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSHN 1032 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1032 (1067)
. ...+++||..|||||.+.+..|+.++||||||++++|+.+|+.||... ..........+..+.+. ....|..
T Consensus 232 S--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~---~~~~~~~~~Ll~~Iv~~ppP~lP~~- 305 (364)
T KOG0581|consen 232 S--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP---NPPYLDIFELLCAIVDEPPPRLPEG- 305 (364)
T ss_pred h--hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc---CCCCCCHHHHHHHHhcCCCCCCCcc-
Confidence 4 446789999999999999999999999999999999999999998643 12223445556666663 3333333
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..+.+++.|+..|+++||.+|||+.|+++
T Consensus 306 --~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 306 --EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred --cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 23445999999999999999999999976
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-46 Score=408.06 Aligned_cols=250 Identities=27% Similarity=0.467 Sum_probs=224.1
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|..++.||+|||+.||+++. .+|+.||+|++.+.........+.+.+||++.++++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5699999999999999999976 899999999998765555556788999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|+|+.++|.++++ ..+++++.++..+++||+.|+.|||++ +|+|||||..|++++++.++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999995 345699999999999999999999999 9999999999999999999999999999999988
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
..+..+.||||.|.|||++....++..+||||+|||+|-|+.|++||+.. ...+....+...+...|.+...
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk--------~vkety~~Ik~~~Y~~P~~ls~ 243 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK--------TVKETYNKIKLNEYSMPSHLSA 243 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc--------hHHHHHHHHHhcCcccccccCH
Confidence 88888999999999999999999999999999999999999999999732 2334445555556666654444
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+ +.++|.++|+.+|.+|||+++|+.
T Consensus 244 ~----A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 244 E----AKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred H----HHHHHHHHhcCCcccCCCHHHHhc
Confidence 4 889999999999999999999985
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-46 Score=393.04 Aligned_cols=255 Identities=26% Similarity=0.366 Sum_probs=218.6
Q ss_pred hcCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCC----hhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 795 TNDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGE----MTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
.+.|...+.||+|+||.|-+| +.++|+.||||++.+..... ........+|+++|++++|||||+++++|+.++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 356788899999999999998 67799999999997543322 1123345799999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC---CCeEEeccc
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK---NEARVSDFG 946 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~---~~~kl~DfG 946 (1067)
.||||||++||+|.+.+-.. +.+.+..-..+++|++.|+.|||++ ||+||||||+|||+..+ -.+||+|||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n---k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN---KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred eEEEEEEecCccHHHHHHhc---cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccc
Confidence 99999999999999988443 3466777788999999999999999 99999999999999876 569999999
Q ss_pred cceecCCCCCccccccccccccCccccccCCC---CccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccC
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYTMKV---TEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD 1023 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1023 (1067)
+|+..+ ....+.+.||||.|.|||++.+..+ ..++|+||+||++|-+++|.+||..... .....+++..
T Consensus 325 lAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~-------~~sl~eQI~~ 396 (475)
T KOG0615|consen 325 LAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT-------DPSLKEQILK 396 (475)
T ss_pred hhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC-------CccHHHHHhc
Confidence 999877 5677889999999999999987653 3488999999999999999999874322 2225567888
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1024 PRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1024 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+++.+.+..+.+...+..++|.+||..||++|||+.|+++
T Consensus 397 G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 397 GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 8888888888888899999999999999999999999986
No 7
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-45 Score=401.97 Aligned_cols=254 Identities=31% Similarity=0.551 Sum_probs=210.9
Q ss_pred CCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-ceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ-HSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~E~ 876 (1067)
+...+.+|+|+||+||+|.++....||||++.....+... .++|.+|+.++++++|||||+++|+|.+.. ..++||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 3445669999999999999985455999999876544444 679999999999999999999999999887 79999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCC-eeecCCCCCceeeCCCC-CeEEeccccceecCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPP-IVHRDISSKNVLLDFKN-EARVSDFGIAKFLKPD 954 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivHrDlk~~Nill~~~~-~~kl~DfG~a~~~~~~ 954 (1067)
+++|+|.++++.. ....+++..+++++.+||+||.|||++ + ||||||||+|||++.++ ++||+|||+++.....
T Consensus 122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999999999764 456799999999999999999999999 7 99999999999999998 9999999999876654
Q ss_pred CCccccccccccccCccccc--cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 955 SSNWTELAGTYGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
...++...||+.|||||++. ...|+.|+||||||+++|||+||+.||......... ...... ..+..+|..
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~----~~v~~~--~~Rp~~p~~- 270 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVA----SAVVVG--GLRPPIPKE- 270 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhc--CCCCCCCcc-
Confidence 34555578999999999999 668999999999999999999999999865531110 111111 122222332
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....+..++.+||+.||.+||++.+++..|+
T Consensus 271 ---~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 271 ---CPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred ---CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 2334889999999999999999999999886
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-43 Score=371.72 Aligned_cols=203 Identities=30% Similarity=0.500 Sum_probs=181.3
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
..+|...+.||+|+||+||+|+++ ++..||||.+....- .....+-+..|+++++.++|||||++++++..++..|+|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 467888899999999999999754 689999999976532 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC------CCeEEecccc
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK------NEARVSDFGI 947 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~------~~~kl~DfG~ 947 (1067)
||||.||+|.++++..+ .+++..+..++.|+|.|+++||++ +||||||||+|||++.. -.+||+|||+
T Consensus 88 MEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999997654 589999999999999999999999 99999999999999875 3589999999
Q ss_pred ceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 001494 948 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFIS 1005 (1067)
Q Consensus 948 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~ 1005 (1067)
|+.+.+ .....+.+|+|-|||||++...+|+.|+|+||+|+++||+++|+.||+...
T Consensus 162 AR~L~~-~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 162 ARFLQP-GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhhCCc-hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 998874 344567899999999999999999999999999999999999999998544
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-44 Score=371.48 Aligned_cols=245 Identities=28% Similarity=0.415 Sum_probs=212.4
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
.++|+..++||+|+||.||.++. .+++.+|+|++++...-+....+...+|..++.+++||.||+++-.|++.+.+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 36799999999999999999964 57899999999877665555677889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
+||+.||.|...+++.+ .+++..+.-++.+|+.||.|||++ ||||||+||+|||+|++|+++|+|||+++....
T Consensus 104 ld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999996544 488888999999999999999999 999999999999999999999999999997666
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.+....+++||+.|||||++.+..|+.++|.||+|+++|||++|.+||.... .....+.+...+...++...
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~--------~~~~~~~I~~~k~~~~p~~l 249 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED--------VKKMYDKILKGKLPLPPGYL 249 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc--------HHHHHHHHhcCcCCCCCccC
Confidence 6666677899999999999999999999999999999999999999987433 23444555555544444322
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC
Q 001494 1034 QEKLISFVEVAISCLDESPESRP 1056 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rp 1056 (1067)
.. ++++++.+.++.||++|-
T Consensus 250 s~---~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 250 SE---EARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CH---HHHHHHHHHhccCHHHhc
Confidence 22 378999999999999995
No 10
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-43 Score=387.63 Aligned_cols=249 Identities=30% Similarity=0.479 Sum_probs=207.0
Q ss_pred CCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEec
Q 001494 798 FDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYL 877 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 877 (1067)
+...+.||+|-||+||.|++.....||+|.++...- ..+.|.+|+++|++++|++||+++|+|..++..|||||||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m 283 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYM 283 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEec
Confidence 455688999999999999999888999999976422 2467899999999999999999999999999999999999
Q ss_pred cCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCc
Q 001494 878 EMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSN 957 (1067)
Q Consensus 878 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 957 (1067)
+.|+|.++++. .....+...+.+.++.|||+|++||+++ ++|||||.++|||++++..+||+|||+|+...++.+.
T Consensus 284 ~~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 284 PKGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred ccCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 99999999976 3345688899999999999999999999 9999999999999999999999999999955443332
Q ss_pred cc-cccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCCCcchH
Q 001494 958 WT-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSHNVQ 1034 (1067)
Q Consensus 958 ~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 1034 (1067)
.. ...-+..|.|||.+..+.++.|||||||||+||||+| |+.||..... .+.+..+..+ +++-|..+.+
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn--------~ev~~~le~GyRlp~P~~CP~ 431 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN--------EEVLELLERGYRLPRPEGCPD 431 (468)
T ss_pred ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--------HHHHHHHhccCcCCCCCCCCH
Confidence 22 2223568999999999999999999999999999998 8999875543 2222233222 3333433333
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
+++++|..||+.+|++|||++.+...++
T Consensus 432 ----~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 432 ----EVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred ----HHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 4899999999999999999999887764
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-44 Score=357.15 Aligned_cols=255 Identities=25% Similarity=0.368 Sum_probs=211.2
Q ss_pred cCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeE-EEeeCC-ceeE
Q 001494 796 NDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG-FCSHAQ-HSFI 872 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~-~~~~~~-~~~l 872 (1067)
.+|++.++||+|.||+||++ ...+|+.||.|.+.-..- +....+....|+.++++++|||||++++ .+.++. ..++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m-d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM-DAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc-cHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 35788899999999999998 577999999999974433 3344677899999999999999999998 444444 4899
Q ss_pred EEEeccCCCHHHHhcccCc-cCCCChHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCceeeCCCCCeEEeccccce
Q 001494 873 VYEYLEMGSLAMILSNDAA-AEDLEWTQRMSVIKGIADALSYLHNDCFPP--IVHRDISSKNVLLDFKNEARVSDFGIAK 949 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDlk~~Nill~~~~~~kl~DfG~a~ 949 (1067)
||||+++|+|..++++.+. ...+++..+++++.|++.||.++|++.. . |+||||||.||+++.+|.||++|||+++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~-r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIP-RGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcccc-ccceeeccCcchheEEcCCCceeeccchhHh
Confidence 9999999999999976443 3468999999999999999999999533 5 8999999999999999999999999999
Q ss_pred ecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC-C
Q 001494 950 FLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP-I 1028 (1067)
Q Consensus 950 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 1028 (1067)
.+..........+|||.||+||.+.+.+|+.||||||+||++|||..-+.||.+.. .......+.....+ .
T Consensus 177 ~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--------~~~L~~KI~qgd~~~~ 248 (375)
T KOG0591|consen 177 FLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--------LLSLCKKIEQGDYPPL 248 (375)
T ss_pred HhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--------HHHHHHHHHcCCCCCC
Confidence 99887777788999999999999999999999999999999999999999987542 22222333333332 2
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
| ....+..+.++|..|+.+||+.||+.-.+++
T Consensus 249 p---~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 249 P---DEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred c---HHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 2 2456667999999999999999998544443
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.3e-43 Score=352.96 Aligned_cols=261 Identities=21% Similarity=0.353 Sum_probs=207.8
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
+.|+...++|+|+||+||+++.+ +|+.||||++..+.. +....+-.++|++++++++|||+|.++.+|......++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed-d~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED-DPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCc-cHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 35777889999999999999765 799999999986543 3444566789999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++..-|++.-+. ...++...+.+++.|+++|+.|+|++ ++|||||||+|||++.+|.+|+||||+|+.+..+
T Consensus 81 E~~dhTvL~eLe~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 81 EYCDHTVLHELERY---PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred eecchHHHHHHHhc---cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 99998666655432 23478889999999999999999999 9999999999999999999999999999999878
Q ss_pred CCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh----------------hhh
Q 001494 955 SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL----------------NIA 1017 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~----------------~~~ 1017 (1067)
+..++..+.|.+|+|||.+.+ .+|+.++||||+||++.||++|.+-|.+.+......... ...
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 888999999999999998887 679999999999999999999998776544322110000 000
Q ss_pred hhhccCCCCCCCCcc---hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1018 LDEILDPRLPIPSHN---VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1018 ~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+..+.-|...-+... .+.....+.+++..|++.||++|++.+|++.
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111111111111111 1122235789999999999999999999874
No 13
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.7e-43 Score=398.02 Aligned_cols=255 Identities=26% Similarity=0.436 Sum_probs=211.0
Q ss_pred cCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
.+....+.||+|+||.||+|+.. +...||||.++... +...+++|.+|++.++.++|||||+++|+|.+++.
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 45566788999999999998643 44679999998653 34467899999999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccCc-----------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC
Q 001494 870 SFIVYEYLEMGSLAMILSNDAA-----------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN 938 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~ 938 (1067)
.++|+|||..|||.++|..... ..+++..+.+.||.|||.|++||-++ .+|||||..+|+||+++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 9999999999999999953221 22388999999999999999999999 899999999999999999
Q ss_pred CeEEeccccceecCCCCCcc-c-cccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhh
Q 001494 939 EARVSDFGIAKFLKPDSSNW-T-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLN 1015 (1067)
Q Consensus 939 ~~kl~DfG~a~~~~~~~~~~-~-~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~ 1015 (1067)
.|||+|||+++.....++.. . ...-+.+|||||.+..++|+.+||||||||+|||+++ |+.||.+... .
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn--------~ 712 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN--------Q 712 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch--------H
Confidence 99999999999765433221 1 2234679999999999999999999999999999998 8999765443 3
Q ss_pred hhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1016 IALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
+.+..+..+++..-++ .++.+++++|..||+..|++||+++||-..|+
T Consensus 713 EVIe~i~~g~lL~~Pe---~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 713 EVIECIRAGQLLSCPE---NCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred HHHHHHHcCCcccCCC---CCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 4445555555532222 33446999999999999999999999988875
No 14
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.8e-47 Score=392.99 Aligned_cols=491 Identities=32% Similarity=0.435 Sum_probs=382.4
Q ss_pred cccccccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccccCCCCCcccccceeec
Q 001494 145 SSLNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNL 224 (1067)
Q Consensus 145 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 224 (1067)
.-|+.|.+++|.++.+. +.+.++..|.+|++++|+++ ..|++++.+..++.|+.++|+++ .+|+.++++.+|..|+.
T Consensus 45 v~l~~lils~N~l~~l~-~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 45 VDLQKLILSHNDLEVLR-EDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDC 121 (565)
T ss_pred cchhhhhhccCchhhcc-HhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhc
Confidence 45888999999998754 45788999999999999998 88999999999999999999998 89999999999999999
Q ss_pred ccCcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEecccccccCCCccccCCcccEEEeccccccCC
Q 001494 225 SSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGL 304 (1067)
Q Consensus 225 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 304 (1067)
++|.+. .+|++++.+..|+.|+..+|+++ ..|+.+.++.+|..|++.+|+++...|..+. ++.|++||+..|.+. .
T Consensus 122 s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 122 SSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-T 197 (565)
T ss_pred ccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-c
Confidence 999998 78888999999999999999998 7888999999999999999999987666555 999999999999887 4
Q ss_pred ccccccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccc-cCCCCCCeEEccCCcCccccCcccCC
Q 001494 305 IPHSLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFL-GNLTNLSVLFIYNNSLSGSIPCEIGN 383 (1067)
Q Consensus 305 ~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~ 383 (1067)
+|+.++++.+|..|||.+|+|... | +|.+++.|.+|+++.|.|. .+|... .++.++..||+..|+++ ..|.++.-
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~~l-P-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl 273 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIRFL-P-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL 273 (565)
T ss_pred CChhhcchhhhHHHHhhhcccccC-C-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHH
Confidence 577889999999999999999855 4 8889999999999999998 555544 48889999999999998 78888888
Q ss_pred CCCCCEEEccCCcccccCCCccccccCCcEEEcccCcCcccCchhhhCcC--CCcEEeCCCCcccCCCCCCCCCCcccEE
Q 001494 384 LKSLSYLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLV--KLTKLFLGDNQFQGPIPNLKNLTSLVRV 461 (1067)
Q Consensus 384 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~l~~l~~L~~L 461 (1067)
+.+|.+||+|+|.|+ ..|.+++++ .|+.|-+.+|++..+-.+.+.+-+ -|++|.= .+..
T Consensus 274 LrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs---~~~~-------------- 334 (565)
T KOG0472|consen 274 LRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRS---KIKD-------------- 334 (565)
T ss_pred hhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHH---hhcc--------------
Confidence 899999999999998 577888888 888898998888633222221110 0111110 0000
Q ss_pred eccCcccccccccccccCCceeEEEcccccccCCCCCCCCCCCCcceEeccCCccCCCCCCccc--CCCCCcEEEcCCCc
Q 001494 462 HLDRNYLTSNISESFYIYPNLTFIDLSYNNLYGEISSDWGRCPKLGALDFSKNNITGNIPPKIG--YSSQLEVLDLSSNH 539 (1067)
Q Consensus 462 ~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~--~~~~L~~L~Ls~N~ 539 (1067)
-.++.-....-. .-+ .......+.....+.+.|++++-+++.+..+.|. ...-....+++.|+
T Consensus 335 ----dglS~se~~~e~------~~t-----~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNq 399 (565)
T KOG0472|consen 335 ----DGLSQSEGGTET------AMT-----LPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQ 399 (565)
T ss_pred ----CCCCCCcccccc------cCC-----CCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccch
Confidence 000000000000 000 0001111222334566667776666633333332 12236677888888
Q ss_pred ccCcCcccccCCCccc-eeecccccccCCccccccccccccEEEccCCCCCCCcccccccccccceecccCcccccccch
Q 001494 540 VVGDIPAELGKLSFLI-KLILAQNQLSGQLSPKLGLLVQLEHLDLSSNNLSNAIPESLGNLVKLHYLNLSNNQFSWEIPI 618 (1067)
Q Consensus 540 l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~ 618 (1067)
+. .+|+.+..+..+. .+.+++|.++ -.|..++.+++|..|+|++|.+. .+|..++.+..|++||+|+|++. ..|.
T Consensus 400 L~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~ 475 (565)
T KOG0472|consen 400 LC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPE 475 (565)
T ss_pred Hh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchH
Confidence 87 6677666665544 4566666665 66778899999999999999886 78888999999999999999998 7899
Q ss_pred hhhhccccceeccccccCCCcchhhhhcccccccccccccccccccccccccCccccEEEcccCcCC
Q 001494 619 KLEELIHLSELDLSYNFLGRAIPSQICIMQSLEKLNLSHNSLSGVIPRCFEEMHALQCIDISYNELR 685 (1067)
Q Consensus 619 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~l~l~~N~l~ 685 (1067)
.+..+..++.+-.++|+++...++.+.+|.+|.+|||.+|.|. .+|..+.+|++|++|++++|+++
T Consensus 476 ~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 476 CLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 9999999999999999999999999999999999999999998 78889999999999999999998
No 15
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.4e-46 Score=388.75 Aligned_cols=495 Identities=31% Similarity=0.404 Sum_probs=367.8
Q ss_pred cccccceecccccccccCCCCccccccccccccccccccccccCCCccCCCcccEEEEeccCCcCccCCcccccccccee
Q 001494 119 HLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDL 198 (1067)
Q Consensus 119 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 198 (1067)
.-.-|+.|++++|.++ .+-+.+.+|..|.+|.+.+|.+.. .|.+++.+..++.|+.++|+++ .+|..++.+.+|+.|
T Consensus 43 ~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~~-lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l 119 (565)
T KOG0472|consen 43 EQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLSQ-LPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKL 119 (565)
T ss_pred hhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhhh-CCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhh
Confidence 3456899999999998 566778999999999999999998 6778999999999999999999 899999999999999
Q ss_pred cccccccccccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEeccccc
Q 001494 199 NLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLS 278 (1067)
Q Consensus 199 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 278 (1067)
+.+.|.+. .+|+.++.+..|+.|+..+|+++ ..|+.++.+.+|..|++.+|++....|..+ +++.|++||.-+|-++
T Consensus 120 ~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~ 196 (565)
T KOG0472|consen 120 DCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE 196 (565)
T ss_pred hcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh
Confidence 99999999 78899999999999999999999 789999999999999999999995545444 5999999999999998
Q ss_pred ccCCCccccCCcccEEEeccccccCCccccccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCcccc
Q 001494 279 GLIPSEIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLG 358 (1067)
Q Consensus 279 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 358 (1067)
.+|+.++++.+|+.|||.+|++... | .|+++..|++|+++.|+|.-...+...++.++.+|||.+|+++ ..|+.+.
T Consensus 197 -tlP~~lg~l~~L~~LyL~~Nki~~l-P-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 197 -TLPPELGGLESLELLYLRRNKIRFL-P-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred -cCChhhcchhhhHHHHhhhcccccC-C-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 5688999999999999999999965 4 8999999999999999999665555669999999999999999 7899999
Q ss_pred CCCCCCeEEccCCcCccccCcccCCCCCCCEEEccCCcccccCCCcccccc---CCcEEEcccCcCcccCchhhhCcCCC
Q 001494 359 NLTNLSVLFIYNNSLSGSIPCEIGNLKSLSYLNLAFNKLTSSIPISLSNLT---NLSVLSFYKNSLSGAIPKEYRNLVKL 435 (1067)
Q Consensus 359 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~---~L~~L~L~~N~l~~~~~~~~~~l~~L 435 (1067)
-+++|++||+++|.|+ ..|.+++++ .|+.|.+.+|.+.. +-..+-+.. -|++|. -.++...+..-.+ .+-
T Consensus 273 lLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLr---s~~~~dglS~se~-~~e 345 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLR---SKIKDDGLSQSEG-GTE 345 (565)
T ss_pred HhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHH---HhhccCCCCCCcc-ccc
Confidence 9999999999999999 678899999 99999999999973 222222211 122221 0111111100000 000
Q ss_pred cEEeCCCCcccCCCCCCCCCCcccEEeccCcccccccccccccCCceeEEEcccccccCCCCCCCCCCCCcceEeccCCc
Q 001494 436 TKLFLGDNQFQGPIPNLKNLTSLVRVHLDRNYLTSNISESFYIYPNLTFIDLSYNNLYGEISSDWGRCPKLGALDFSKNN 515 (1067)
Q Consensus 436 ~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~ 515 (1067)
..-+ ...+..+....+.+.+.|++++-+++.++.+.|.... -.-.+.++++.|+
T Consensus 346 ~~~t----~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~----------------------~~~Vt~VnfskNq 399 (565)
T KOG0472|consen 346 TAMT----LPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAK----------------------SEIVTSVNFSKNQ 399 (565)
T ss_pred ccCC----CCCCcccchhhhhhhhhhcccccccccCCHHHHHHhh----------------------hcceEEEecccch
Confidence 0000 0111222233334455555555555555555553321 1124445555555
Q ss_pred cCCCCCCcccCCCCCcE-EEcCCCcccCcCcccccCCCccceeecccccccCCccccccccccccEEEccCCCCCCCccc
Q 001494 516 ITGNIPPKIGYSSQLEV-LDLSSNHVVGDIPAELGKLSFLIKLILAQNQLSGQLSPKLGLLVQLEHLDLSSNNLSNAIPE 594 (1067)
Q Consensus 516 l~~~~~~~~~~~~~L~~-L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 594 (1067)
+. .+|..+..+..+.+ +++++|.+. .+|..++.++.|+.|+|++|-+. .+|..++.+..|+.||+|+|++. ..|.
T Consensus 400 L~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~ 475 (565)
T KOG0472|consen 400 LC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPE 475 (565)
T ss_pred Hh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchH
Confidence 54 44554444444333 333444333 55666666666666666666555 45666666667777777777776 6777
Q ss_pred ccccccccceecccCcccccccchhhhhccccceeccccccCCCcchhhhhcccccccccccccccc
Q 001494 595 SLGNLVKLHYLNLSNNQFSWEIPIKLEELIHLSELDLSYNFLGRAIPSQICIMQSLEKLNLSHNSLS 661 (1067)
Q Consensus 595 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 661 (1067)
.+..+..|+++-.++|++....|+.+.+|.+|..|||.+|.| ..+|..+++|.+|++|+|++|+|.
T Consensus 476 ~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdl-q~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 476 CLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDL-QQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCch-hhCChhhccccceeEEEecCCccC
Confidence 777777777777777888766666678888888888888887 466777888888888888888887
No 16
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-42 Score=374.77 Aligned_cols=249 Identities=25% Similarity=0.444 Sum_probs=212.3
Q ss_pred cCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
..|...++||+|+.|.||.| +..+++.||||++....... .+-+..|+.+|+..+|+|||.+++.|..++..|+||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~---keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK---KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc---hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 45788899999999999998 46678999999997543322 356789999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|||+||+|.+++.+.. +++.++..|+.++++||+|||.+ ||+|||||.+|||++.+|.+||+|||++..+...
T Consensus 350 Eym~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred eecCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence 9999999999996543 89999999999999999999999 9999999999999999999999999999998887
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
.......+|||.|||||++....|++|+||||||+|++||+-|.+||-...+... -..+..--.+.+..+..
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA-----lyLIa~ng~P~lk~~~k--- 494 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----LYLIATNGTPKLKNPEK--- 494 (550)
T ss_pred cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH-----HHHHhhcCCCCcCCccc---
Confidence 7788889999999999999999999999999999999999999999754332211 11111222233333333
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.+..+.+|+.+||+.||++||+|.|+++
T Consensus 495 -lS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 495 -LSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred -cCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 3345999999999999999999999986
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-41 Score=364.37 Aligned_cols=255 Identities=26% Similarity=0.384 Sum_probs=217.0
Q ss_pred HHHhcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCc
Q 001494 792 IRATNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 792 ~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 869 (1067)
.+...+|..++.||+|+|++||+|+ ..+++.||||++.+...-.....+-+..|-.+|.+| .||.|++++-.|.++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3445789999999999999999995 568999999998654333222234466788889999 89999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccce
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAK 949 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~ 949 (1067)
+|+|+||+++|+|.+++++. +.+++.-+..++.+|+.|++|||++ |||||||||+|||+|.+|++||+|||.|+
T Consensus 149 LYFvLe~A~nGdll~~i~K~---Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKY---GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred eEEEEEecCCCcHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccc
Confidence 99999999999999999765 4488899999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC-------------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhh
Q 001494 950 FLKPDSS-------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNI 1016 (1067)
Q Consensus 950 ~~~~~~~-------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~ 1016 (1067)
.+.+... ....++||..|.+||++.....++.+|+|+||||+|+|+.|++||.. .+...
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra--------~Neyl 294 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA--------ANEYL 294 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc--------ccHHH
Confidence 7754211 12458999999999999999999999999999999999999999863 33455
Q ss_pred hhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1017 ALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.++.++.-.+.+|+...+. +.+|+.+.|..||.+|+|++|+.+.
T Consensus 295 iFqkI~~l~y~fp~~fp~~----a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 295 IFQKIQALDYEFPEGFPED----ARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHHHHHhcccCCCCCCHH----HHHHHHHHHccCccccccHHHHhhC
Confidence 6667777677777665544 8899999999999999999998753
No 18
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.7e-41 Score=329.83 Aligned_cols=259 Identities=22% Similarity=0.320 Sum_probs=207.9
Q ss_pred cCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|...+++|+|.||.||+| +..+|+.||||+++.....+ .......+|++.++.++||||+.++++|...+...+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 46778899999999999999 46789999999998653322 22345789999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|||+ .+|+..++. ....++..++..++.++++|++|||++ .|+||||||.|+|++.+|.+||+|||+|+.+.+.
T Consensus 81 Efm~-tdLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 81 EFMP-TDLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred Eecc-ccHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9997 489998853 344689999999999999999999999 9999999999999999999999999999999887
Q ss_pred CCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchh-------------------h
Q 001494 955 SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN-------------------L 1014 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~-------------------~ 1014 (1067)
....+..+-|.+|+|||.+.|. .|+..+||||.|||+.||+-|.+-|.+....+..... .
T Consensus 155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 7776667889999999988775 4999999999999999999998776554332211111 1
Q ss_pred hhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1015 NIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
...+...-.+. .....+.......+++..++..||.+|.|++|++++
T Consensus 235 Y~~~~~~P~~~---~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 235 YVKIQQFPKPP---LNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHhcCCCCc---cccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111110000 011223334457999999999999999999999864
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=351.01 Aligned_cols=261 Identities=25% Similarity=0.404 Sum_probs=210.0
Q ss_pred hcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
.++|+..+.||.|..++||+|+ ...++.||||++.-..... ..+.+.+|+..|+.++||||+.++..|..+...|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 3678999999999999999995 5678999999997654433 367899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|.||.+|++.++++..... .+++..+..|.+++++||.|||.+ |.||||||+.||||+.+|.|||+|||.+..+..
T Consensus 103 mpfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred ehhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 9999999999999764443 389999999999999999999999 999999999999999999999999998876654
Q ss_pred CCCc----cccccccccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 954 DSSN----WTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 954 ~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
.+.+ ...++||+.|||||++.. ..|+.|+||||||++..||.+|+.||....+.................. .
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~--~ 256 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTS--G 256 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccc--c
Confidence 4332 245689999999998543 3589999999999999999999999986665432211111111100000 0
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.+.+.......++.+++..|+++||++||||+++++
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 111122233457999999999999999999999875
No 20
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.2e-41 Score=362.65 Aligned_cols=248 Identities=28% Similarity=0.404 Sum_probs=214.2
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|.+.+.||+|.||.||||+. .+.+.||+|.+.+....++ ..+.+.+|++++++++|||||.++++|+...++|+|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k-~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEK-ELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchH-HHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 4688888999999999999965 4789999999987655443 3567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+.| +|..++..++ .++++++..|+.+++.||.|||+. +|+|||+||+|||++..|.+|+||||+|+.+...
T Consensus 81 e~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 99987 9999996544 499999999999999999999999 9999999999999999999999999999998877
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
....+...|||-|||||.+.+.+|+..+|.||+||++||+++|++||-..+ ..+.+..+.......|.
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--------i~~Lv~~I~~d~v~~p~---- 221 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--------ITQLVKSILKDPVKPPS---- 221 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--------HHHHHHHHhcCCCCCcc----
Confidence 777788899999999999999999999999999999999999999975222 23334444444443333
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.....+..++...+.+||.+|.|..+++.
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 34445899999999999999999988764
No 21
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-41 Score=359.66 Aligned_cols=262 Identities=26% Similarity=0.409 Sum_probs=204.5
Q ss_pred hcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--Ccee
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHSF 871 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 871 (1067)
.+.|+..++||+|.||.||+|+ ..+|+.||+|++...... ........+||.++++++||||+++.+...+. +.+|
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 3557788999999999999994 678999999999866433 23456678999999999999999999998877 6899
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+|+|||++ ||.-++... .-.+++.++..+++|++.||+|+|++ ||+|||||.+|||||.+|.+||+|||+|+.+
T Consensus 195 lVFeYMdh-DL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEEecccc-hhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeec
Confidence 99999987 666666432 33589999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCC-ccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh--------hhhh---
Q 001494 952 KPDSS-NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL--------NIAL--- 1018 (1067)
Q Consensus 952 ~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~--------~~~~--- 1018 (1067)
..... .++..+-|.+|+|||.+.+. .|+.++|+||.|||+.||++|++.|.+-...+...... ..+.
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 76543 47888999999999988875 59999999999999999999999986543322111100 0010
Q ss_pred -h--hccCCCCCCCCc---chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1019 -D--EILDPRLPIPSH---NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1019 -~--~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. ..+.+..+.... .......+..+++..+|..||++|.||.++++
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0 001111000000 00111235789999999999999999999875
No 22
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-41 Score=360.96 Aligned_cols=248 Identities=31% Similarity=0.519 Sum_probs=206.6
Q ss_pred cccHHHHHHHhcCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEE
Q 001494 785 KIVYEEIIRATNDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFC 864 (1067)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 864 (1067)
.++|+++.+ .+-||.|+.|.||.|+++ ++.||||+++.- -..+|+-+++|+||||+.|.|+|
T Consensus 120 eiPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~el----------kETdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 120 EIPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVREL----------KETDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred cCCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHhhh----------hhhhHHHHHhccCcceeeEeeee
Confidence 456766643 466999999999999998 788999998531 13678999999999999999999
Q ss_pred eeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEec
Q 001494 865 SHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSD 944 (1067)
Q Consensus 865 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~D 944 (1067)
.....++||||||+.|-|+.+++.. ..++......+.++||.|+.|||.+ .|||||+|.-||||+.+..|||+|
T Consensus 182 tqsPcyCIiMEfCa~GqL~~VLka~---~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsD 255 (904)
T KOG4721|consen 182 TQSPCYCIIMEFCAQGQLYEVLKAG---RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISD 255 (904)
T ss_pred cCCceeEEeeeccccccHHHHHhcc---CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEecc
Confidence 9999999999999999999999543 3477788899999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC
Q 001494 945 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP 1024 (1067)
Q Consensus 945 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1024 (1067)
||-++..... ..+..++||..|||||++...+.++|+|||||||+||||+||..||..++..... +. ..... -
T Consensus 256 FGTS~e~~~~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII---wG-VGsNs--L 328 (904)
T KOG4721|consen 256 FGTSKELSDK-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII---WG-VGSNS--L 328 (904)
T ss_pred ccchHhhhhh-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE---Ee-ccCCc--c
Confidence 9999876544 5556789999999999999999999999999999999999999998755431100 00 00011 1
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhcC
Q 001494 1025 RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLKI 1067 (1067)
Q Consensus 1025 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~ 1067 (1067)
.++.|..+. ..++-++++||+..|..||++++++..|+|
T Consensus 329 ~LpvPstcP----~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 329 HLPVPSTCP----DGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred cccCcccCc----hHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 334444433 348889999999999999999999999876
No 23
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=332.71 Aligned_cols=240 Identities=26% Similarity=0.349 Sum_probs=211.1
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||.|+||.|..++.+ +|..+|+|++.....-...+.+....|..+++.+.||.++++++.+.+.+..|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 56888999999999999999755 68899999998655445555667889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++||.|..++++. +++++..+.-+|.||+.|++|||+. +|++||+||+|||+|++|.+||+|||+|+.+...
T Consensus 124 eyv~GGElFS~Lrk~---~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS---GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHHhc---CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 999999999999654 3489999999999999999999999 9999999999999999999999999999987633
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
.-+.||||.|+|||.+.+.+|..++|-|||||++|||+.|.+||..... -...+.++...+.+|+....
T Consensus 198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~~~~v~fP~~fs~ 266 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKILEGKVKFPSYFSS 266 (355)
T ss_pred ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHHhCcccCCcccCH
Confidence 4568999999999999999999999999999999999999999863332 34455677777777776665
Q ss_pred HHHHHHHHHHHhccCCCCCCCC
Q 001494 1035 EKLISFVEVAISCLDESPESRP 1056 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rp 1056 (1067)
+ +.+++...+++|-.+|.
T Consensus 267 ~----~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 267 D----AKDLLKKLLQVDLTKRF 284 (355)
T ss_pred H----HHHHHHHHHhhhhHhhh
Confidence 5 88999999999999993
No 24
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=371.86 Aligned_cols=363 Identities=24% Similarity=0.224 Sum_probs=308.0
Q ss_pred cccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccccCCCCCcccccceeecccCc
Q 001494 149 NLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNS 228 (1067)
Q Consensus 149 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 228 (1067)
.|++++|.+..+-+..|.++++|+++++..|.++ .||...+-..+|+.|+|.+|.|+..-.+.+..++.|+.||||.|.
T Consensus 82 ~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~ 160 (873)
T KOG4194|consen 82 TLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNL 160 (873)
T ss_pred eeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhch
Confidence 4555555555555666777777777777777777 677666666667777777777776666777778888888888888
Q ss_pred CCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEecccccccCCCccccCCcccEEEeccccccCCcccc
Q 001494 229 LFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIPHS 308 (1067)
Q Consensus 229 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 308 (1067)
|+.+.-..|..-.++++|+|++|+|+..-.+.|.++.+|..|.|++|+++.+++..|+++++|+.|+|..|+|.-..--.
T Consensus 161 is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~lt 240 (873)
T KOG4194|consen 161 ISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLT 240 (873)
T ss_pred hhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhh
Confidence 87555556766678888899999988777788999999999999999999888889999999999999999998665678
Q ss_pred ccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeEEccCCcCccccCcccCCCCCCC
Q 001494 309 LGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLSGSIPCEIGNLKSLS 388 (1067)
Q Consensus 309 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 388 (1067)
|.++++|+.|.|..|.|.....+.|..|.++++|+|+.|+++..-..++.+++.|+.|++++|.|....++.+...++|+
T Consensus 241 FqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~ 320 (873)
T KOG4194|consen 241 FQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLK 320 (873)
T ss_pred hcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccce
Confidence 99999999999999999999999999999999999999999988888999999999999999999988888888899999
Q ss_pred EEEccCCcccccCCCccccccCCcEEEcccCcCcccCchhhhCcCCCcEEeCCCCcccCCCC----CCCCCCcccEEecc
Q 001494 389 YLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVKLTKLFLGDNQFQGPIP----NLKNLTSLVRVHLD 464 (1067)
Q Consensus 389 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~l~~l~~L~~L~L~ 464 (1067)
+|+|++|+|+...+.+|..+.+|++|+|++|+|+..--..|..+.+|++|||+.|.+...+. .+.++++|+.|.+.
T Consensus 321 ~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~ 400 (873)
T KOG4194|consen 321 ELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLT 400 (873)
T ss_pred eEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeec
Confidence 99999999998888999999999999999999998888899999999999999999877443 36778888888888
Q ss_pred CcccccccccccccCCceeEEEcccccccCCCCCCCCCCCCcceEeccC
Q 001494 465 RNYLTSNISESFYIYPNLTFIDLSYNNLYGEISSDWGRCPKLGALDFSK 513 (1067)
Q Consensus 465 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~ 513 (1067)
+|++.+++..+|.++++|++|||.+|.|..+-+.+|..+ .|++|.+..
T Consensus 401 gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 401 GNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred CceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 888888888888888888888888888888888888877 777776654
No 25
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=353.62 Aligned_cols=252 Identities=29% Similarity=0.458 Sum_probs=199.6
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC--ceeE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ--HSFI 872 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 872 (1067)
.++...+.||+|+||+||++... +|+..|||.+..... . ..+.+.+|+.++++++|||||+++|...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~-~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--P-TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--h-hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 45778899999999999999765 499999999875421 1 1567889999999999999999999855554 6899
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC-CCCeEEeccccceec
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF-KNEARVSDFGIAKFL 951 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~-~~~~kl~DfG~a~~~ 951 (1067)
.|||+++|+|.+++.+.+. .+++..+.++++||++||+|||++ |||||||||+|||++. ++.+||+|||+++..
T Consensus 94 ~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999999999976543 599999999999999999999999 9999999999999999 799999999999876
Q ss_pred CCC---CCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 952 KPD---SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 952 ~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
... ........||+.|||||++..+ ...+++||||+||++.||+||+.||... .............. ..| .
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~-~~P--~ 243 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGRED-SLP--E 243 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccC-CCC--C
Confidence 631 1223457899999999999853 3446999999999999999999997643 00000011111111 111 2
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
+|.... .+..+++.+|++.+|.+||||.++++.
T Consensus 244 ip~~ls----~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 244 IPDSLS----DEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CCcccC----HHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 333322 348899999999999999999999874
No 26
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-41 Score=374.48 Aligned_cols=251 Identities=26% Similarity=0.470 Sum_probs=209.9
Q ss_pred CCccCccccCCceeEEEEEECC----CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 798 FDDEHCIGKGGQGSVYKVELAS----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
..+.++||.|.||.||+|+++. ...||||.++.... ..++.+|+.|+.+|.+++||||+++.|+.......+||
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt--ekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc--HHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 3567899999999999998752 35699999986543 34568899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
.|||++|+|+.+++... +++++.+...|.++||.|+.||.+. ++|||||.++|||++.+-.+||+|||+++.+.+
T Consensus 709 TEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred hhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeeccc
Confidence 99999999999996543 5699999999999999999999999 999999999999999999999999999998866
Q ss_pred CCC-ccccccc--cccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCC
Q 001494 954 DSS-NWTELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIP 1029 (1067)
Q Consensus 954 ~~~-~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1067)
+.. .++...| +.+|.|||.+...+++.+||||||||++||.++ |..||..+.. +..+..+.++. ..|
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--------QdVIkaIe~gy-RLP 854 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------QDVIKAIEQGY-RLP 854 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch--------HHHHHHHHhcc-CCC
Confidence 553 3344444 468999999999999999999999999999886 9999865443 23333333332 222
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
++. +++..+.++|..||++|-.+||++.|++..|+
T Consensus 855 pPm--DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lD 889 (996)
T KOG0196|consen 855 PPM--DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLD 889 (996)
T ss_pred CCC--CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 222 23446999999999999999999999998874
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=363.61 Aligned_cols=253 Identities=23% Similarity=0.365 Sum_probs=212.4
Q ss_pred HhcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCC-Ch-hHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCc
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPG-EM-TFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 869 (1067)
....|..++.||+|+||.|+.|+ ..+++.||+|++...... .. ...+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 34679999999999999999995 557899999977653221 11 23455678999999998 9999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC-CCeEEeccccc
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK-NEARVSDFGIA 948 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~-~~~kl~DfG~a 948 (1067)
.|+||||+.||+|.+++.. .+++.+..+.++++|++.|++|||++ ||+||||||+||+++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 9999999999999999965 34588899999999999999999999 99999999999999999 99999999999
Q ss_pred eecCCCCCccccccccccccCccccccCC-CC-ccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCC
Q 001494 949 KFLKPDSSNWTELAGTYGYVAPELAYTMK-VT-EKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRL 1026 (1067)
Q Consensus 949 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1067)
...........+.+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+... .......+....+
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~--------~~~l~~ki~~~~~ 240 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN--------VPNLYRKIRKGEF 240 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc--------HHHHHHHHhcCCc
Confidence 98754455667889999999999999877 75 78999999999999999999998522 1222233555556
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.+|.... ..++..++.+|+..+|.+|+|+.++++
T Consensus 241 ~~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 241 KIPSYLL---SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred cCCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 6655441 334899999999999999999999974
No 28
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=353.59 Aligned_cols=261 Identities=21% Similarity=0.321 Sum_probs=205.6
Q ss_pred hcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCC-cee
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQ-HSF 871 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~ 871 (1067)
.++|...++||.|.||.||+|+ ..+|+.||||+++..... ..+-.=++|++.++++. |||||++.+++.+.+ .+|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc--HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 4678899999999999999995 568999999999764332 11223478999999998 999999999998888 999
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+|||||+. +|+++++++ ...+++.++..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+||.+
T Consensus 87 fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 99999975 899999654 67799999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCccccccccccccCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccc-------------hhhhhh
Q 001494 952 KPDSSNWTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSS-------------LNLNIA 1017 (1067)
Q Consensus 952 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~-------------~~~~~~ 1017 (1067)
.. ...++..+.|.+|+|||++. .+-|+.+.||||+|||++|+.+-++-|.+........ ......
T Consensus 161 ~S-kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 161 RS-KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred cc-CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 64 34568889999999999765 5668999999999999999999887775543321100 000011
Q ss_pred hhhccCCCCCCCCc-----chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1018 LDEILDPRLPIPSH-----NVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1018 ~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
....+.-+++.-.. .......++.+++.+|+.+||++||||.|+++.
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111111111111 111234568999999999999999999999874
No 29
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=366.25 Aligned_cols=362 Identities=26% Similarity=0.250 Sum_probs=244.1
Q ss_pred cEEEeccccccCCccccccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeEEccCC
Q 001494 292 SKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFIYNN 371 (1067)
Q Consensus 292 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 371 (1067)
+.|++++|+++..-+..|.++++|+++++.+|.++.+ |..-....+|+.|+|.+|.|+.+-.+.+..++.|+.|||+.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~I-P~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRI-PRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhhhc-ccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 3455555555555555555555555555555555532 333333344666666666666555566666666777777777
Q ss_pred cCccccCcccCCCCCCCEEEccCCcccccCCCccccccCCcEEEcccCcCcccCchhhhCcCCCcEEeCCCCcccCC-CC
Q 001494 372 SLSGSIPCEIGNLKSLSYLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVKLTKLFLGDNQFQGP-IP 450 (1067)
Q Consensus 372 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~ 450 (1067)
.|+...-..|..-.++++|+|++|.|+..-...|.++.+|.+|.|++|+|+...+..|+.+++|+.|+|..|+|.-. .-
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~l 239 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGL 239 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhh
Confidence 77644334566667788888888888877777788888888888888888877778888888888888888888754 34
Q ss_pred CCCCCCcccEEeccCcccccccccccccCCceeEEEcccccccCCCCCCCCCCCCcceEeccCCccCCCCCCcccCCCCC
Q 001494 451 NLKNLTSLVRVHLDRNYLTSNISESFYIYPNLTFIDLSYNNLYGEISSDWGRCPKLGALDFSKNNITGNIPPKIGYSSQL 530 (1067)
Q Consensus 451 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L 530 (1067)
.|.++++|+.|.|.+|.|..+..++|+.+.++++|+|+.|+++..-..++.++.+|+.|+||+|.|..+.++.....++|
T Consensus 240 tFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL 319 (873)
T KOG4194|consen 240 TFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKL 319 (873)
T ss_pred hhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccc
Confidence 67888888888889999888888888888888888888888887777777888888888888888888888888888888
Q ss_pred cEEEcCCCcccCcCcccccCCCccceeecccccccCCccccccccccccEEEccCCCCCCCcc---cccccccccceecc
Q 001494 531 EVLDLSSNHVVGDIPAELGKLSFLIKLILAQNQLSGQLSPKLGLLVQLEHLDLSSNNLSNAIP---ESLGNLVKLHYLNL 607 (1067)
Q Consensus 531 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---~~l~~l~~L~~L~L 607 (1067)
+.|+|++|+|+...+..|..++.|++|+|++|.|+.+-..+|..+++|+.|||++|.|+..+. ..|..+++|+.|.|
T Consensus 320 ~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l 399 (873)
T KOG4194|consen 320 KELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRL 399 (873)
T ss_pred eeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheee
Confidence 888888888887666666666666666666666665545555555666666666665553322 23444455555555
Q ss_pred cCcccccccchhhhhccccceeccccccCCCcchhhhhcccccccccc
Q 001494 608 SNNQFSWEIPIKLEELIHLSELDLSYNFLGRAIPSQICIMQSLEKLNL 655 (1067)
Q Consensus 608 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 655 (1067)
.+|+|..+.-.+|.++..|++|||.+|.|..+-+.+|..| .|+.|-+
T Consensus 400 ~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 400 TGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred cCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhh
Confidence 5555544444444555555555555555544444555444 4444444
No 30
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-40 Score=322.95 Aligned_cols=252 Identities=26% Similarity=0.406 Sum_probs=217.3
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
.++|+.++.||+|-||.||.|+. +++-.||+|++.+.........+++.+|+++.+.++||||.+++++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 46799999999999999999964 56788999999876555555677899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
+||.+.|.+...++.. ..+.+++.....++.|+|.|+.|+|.. +|+||||||+|+|++.++..||+|||.+....
T Consensus 101 lEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 9999999999999643 345588888899999999999999999 99999999999999999999999999997543
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.......+||..|.|||+..+..++.++|+|++|++.||++.|.+||+... ......++...+..+|....
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--------~~etYkrI~k~~~~~p~~is 246 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--------HSETYKRIRKVDLKFPSTIS 246 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--------hHHHHHHHHHccccCCcccC
Confidence 556678999999999999999999999999999999999999999987433 23334444444555554444
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
. ++.++|.+|+..+|.+|.+..|+++.
T Consensus 247 ~----~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 247 G----GAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred h----hHHHHHHHHhccCccccccHHHHhhh
Confidence 4 38899999999999999999998763
No 31
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-40 Score=360.91 Aligned_cols=250 Identities=26% Similarity=0.396 Sum_probs=216.0
Q ss_pred cCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.-|+.++-||.|+.|.|..|+ ..+|+.+|||++.....-.......+.+|+.+|+-+.||||+++++++++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 347788999999999999996 4689999999997654333444567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|-|.+++-+ .+++++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|.. ..+
T Consensus 92 Eyv~gGELFdylv~---kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsL-e~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVR---KGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASL-EVP 164 (786)
T ss_pred EecCCchhHHHHHh---hCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeec-ccC
Confidence 99999999999954 34589999999999999999999999 999999999999999999999999999975 444
Q ss_pred CCccccccccccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
+.-..+.||.|.|.|||++.+.+| +.++||||.|||||.|+||+.|||. .+.......+..+.+..|....
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD--------dNir~LLlKV~~G~f~MPs~Is 236 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD--------DNIRVLLLKVQRGVFEMPSNIS 236 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC--------ccHHHHHHHHHcCcccCCCcCC
Confidence 556678899999999999999998 6799999999999999999999983 2334445556666666665444
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.+ +++++++|+.+||.+|.|++||.+.
T Consensus 237 ~e----aQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 237 SE----AQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HH----HHHHHHHHhccCccccccHHHHhhC
Confidence 44 8999999999999999999999863
No 32
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.5e-40 Score=339.85 Aligned_cols=248 Identities=23% Similarity=0.352 Sum_probs=218.6
Q ss_pred cCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|++.+.||+|.||.|-+|. +..|+.||||.+++....+....-.+.+||++|+.++||||+.++.+|+..+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 567888999999999999984 5789999999999877776666667899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||..+|.|++|+.+.+ .+++.++..+++||..|+.|+|.+ +++|||+|.+|||+|+++++||+|||++..+..
T Consensus 133 EYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~- 205 (668)
T KOG0611|consen 133 EYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD- 205 (668)
T ss_pred EecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc-
Confidence 9999999999997644 499999999999999999999999 999999999999999999999999999987764
Q ss_pred CCccccccccccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
....+++||+|-|.+||.+.+.+| ++.+|.||+||++|-+..|..|||+.+. ...+.++..+.+..|....
T Consensus 206 ~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--------k~lvrQIs~GaYrEP~~PS 277 (668)
T KOG0611|consen 206 KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--------KRLVRQISRGAYREPETPS 277 (668)
T ss_pred ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--------HHHHHHhhcccccCCCCCc
Confidence 456688999999999999999998 6789999999999999999999996553 4556666666665543322
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...-+|+.|+.++|++|.|+.+|..
T Consensus 278 -----dA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 278 -----DASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred -----hHHHHHHHHHhcCcccchhHHHHhh
Confidence 2567999999999999999999875
No 33
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=383.90 Aligned_cols=254 Identities=27% Similarity=0.441 Sum_probs=209.1
Q ss_pred CCCccCccccCCceeEEEEEEC--CCc----EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA--SGE----IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
..+..+.||+|+||.||.|... .|. .||||.+... .+.....+|.+|+.+|+.++|||||+++|+|-+.+..
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 4556788999999999999764 343 4899988754 3445578899999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHHhcccCc----cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 871 FIVYEYLEMGSLAMILSNDAA----AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
+|++|||++|+|..++++.+. ...++..+.+.++.|||+|+.||+++ ++|||||.++|+|+++...|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccc
Confidence 999999999999999976422 34688999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCc-cccc-cccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccC
Q 001494 947 IAKFLKPDSSN-WTEL-AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILD 1023 (1067)
Q Consensus 947 ~a~~~~~~~~~-~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1023 (1067)
+|+.+....+. .... .-+.+|||||.+..+.++.|+|||||||++||++| |..||...... .....-...
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~-------~v~~~~~~g 920 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF-------EVLLDVLEG 920 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH-------HHHHHHHhC
Confidence 99955433222 2222 23568999999999999999999999999999998 89998754432 122223334
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1024 PRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1024 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
+++..|+.+.. .++++|..||+.+|++||++..+++.++
T Consensus 921 gRL~~P~~CP~----~ly~lM~~CW~~~pe~RP~F~~i~~q~~ 959 (1025)
T KOG1095|consen 921 GRLDPPSYCPE----KLYQLMLQCWKHDPEDRPSFRTIVEQDP 959 (1025)
T ss_pred CccCCCCCCCh----HHHHHHHHHccCChhhCccHHHHHhhhh
Confidence 56666655544 4889999999999999999999998764
No 34
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=328.38 Aligned_cols=253 Identities=23% Similarity=0.335 Sum_probs=215.8
Q ss_pred hcCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
+++|++.+.||+|+|+.||++ ...+|+.+|+|++....-... ..+++.+|+++-+.++|||||++.+.+.+.+..|+|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 456888899999999999996 667899999998864433322 357889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC---CCeEEecccccee
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK---NEARVSDFGIAKF 950 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~---~~~kl~DfG~a~~ 950 (1067)
+|+|.|++|..-+-.. .-.++..+-..++||++|+.|+|.+ +|||||+||+|+++-.. .-+|++|||+|..
T Consensus 89 Fe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999996544221 3367888889999999999999999 99999999999999644 3499999999999
Q ss_pred cCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCC
Q 001494 951 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPS 1030 (1067)
Q Consensus 951 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1067)
+. +...+..++|||+|||||++...+|+..+|||+.||++|-++.|+.||.+.+ .....++++......++
T Consensus 163 l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--------~~rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 163 VN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYEQIKAGAYDYPS 233 (355)
T ss_pred eC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--------HHHHHHHHhccccCCCC
Confidence 88 6667788999999999999999999999999999999999999999986432 23445566667777777
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1031 HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1031 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..++...++.++++++|+..||.+|.|+.|.++
T Consensus 234 ~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 234 PEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 667777778999999999999999999999875
No 35
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-40 Score=364.43 Aligned_cols=254 Identities=29% Similarity=0.444 Sum_probs=205.1
Q ss_pred cCCCccCccccCCceeEEEEEECC--C--cE-EEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELAS--G--EI-IAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~--~--~~-vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
++....++||+|+||.||+|++.. + .. ||||..+..........++|+.|+++|+.++|||||+++|++..+...
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344556899999999999997543 2 23 899998864434456688999999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
|+|||+|+||+|.++++... +.++..++.+++.++|.||+|||++ +++||||.++|+|++.++.+||+|||+++.
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~--~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNK--KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred EEEEEecCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccC
Confidence 99999999999999996543 2689999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC--CCC
Q 001494 951 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP--RLP 1027 (1067)
Q Consensus 951 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 1027 (1067)
-...........-+.+|+|||.+..+.|++++|||||||++||+++ |..||.+.... +....+... +.+
T Consensus 312 ~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--------~v~~kI~~~~~r~~ 383 (474)
T KOG0194|consen 312 GSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--------EVKAKIVKNGYRMP 383 (474)
T ss_pred CcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--------HHHHHHHhcCccCC
Confidence 4311111111224678999999999999999999999999999998 88898765543 222233111 122
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+. ..+..+..++.+||..+|++||+|.++.+.++
T Consensus 384 ~~~----~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 384 IPS----KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CCC----CCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 222 22234778888999999999999999999875
No 36
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=355.00 Aligned_cols=257 Identities=25% Similarity=0.386 Sum_probs=205.5
Q ss_pred HhcCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
..+++.....||+|.||+||+|++. | .||||++........ ..+.|+.|+..+++-+|.||+=+.|||..+.. .||
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred CHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 3345677899999999999999876 4 389999987765544 67889999999999999999999999999887 999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
+.+|+|.+|+.+++-.+ ..++..+.+.||+|||+|+.|||.+ +|||||+|..||++.+++.|||+|||++..-..
T Consensus 466 TqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR 540 (678)
T ss_pred ehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeee
Confidence 99999999999996433 5688889999999999999999999 999999999999999999999999999975332
Q ss_pred --CCCccccccccccccCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCC
Q 001494 954 --DSSNWTELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPI 1028 (1067)
Q Consensus 954 --~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1067)
.........|...|||||++... +|++.+||||||+++|||+||..||.. ...+ ....+..+....++...
T Consensus 541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~d---qIifmVGrG~l~pd~s~ 616 (678)
T KOG0193|consen 541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRD---QIIFMVGRGYLMPDLSK 616 (678)
T ss_pred eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChh---heEEEecccccCccchh
Confidence 22233445677889999988754 589999999999999999999999872 2110 00111111111222222
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
. ......++.+|+..||..++++||.+.+++..|+
T Consensus 617 ~---~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 617 I---RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred h---hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 2 2334456999999999999999999999999664
No 37
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-40 Score=347.66 Aligned_cols=250 Identities=25% Similarity=0.430 Sum_probs=210.0
Q ss_pred cCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
..|...+.||+|.||.||+|. ..+++.||+|++...... ...+++.+|+.++.+++++||.++++.+..+..+|++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~--deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE--DEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcc--hhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 457777999999999999984 568999999999765433 34578889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+.||++.+.++... .+++..+.-|++++..|+.|+|++ +.+|||||+.||++..+|.+|++|||.+.++...
T Consensus 91 ey~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech
Confidence 9999999999995433 346777778999999999999999 9999999999999999999999999999998877
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
.....+++|||-|||||++....|+.|+||||+|++.+||.+|.+|+....++... ..+ ++-. |+....
T Consensus 165 ~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl---------flI-pk~~-PP~L~~ 233 (467)
T KOG0201|consen 165 VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL---------FLI-PKSA-PPRLDG 233 (467)
T ss_pred hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE---------Eec-cCCC-CCcccc
Confidence 77778899999999999999889999999999999999999999998654432110 111 1111 111112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.....+++|+..|++++|+.||+|.++++.
T Consensus 234 ~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 234 DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 444569999999999999999999999863
No 38
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.1e-39 Score=349.26 Aligned_cols=251 Identities=25% Similarity=0.333 Sum_probs=203.9
Q ss_pred hcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
.++|+..++||+||||+||.|+ ..+|+.+|+|++++..--.....+.++.|-.+|...++|+||+++-.|++.+.+|+|
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 4689999999999999999996 457999999999876544555667788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||++||++.-++.+. +.+++..+..++.+++-|++.+|.. |+|||||||+|+|||..|++|++|||++.-+..
T Consensus 220 MEylPGGD~mTLL~~~---~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRK---DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEecCCccHHHHHHhc---CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhh
Confidence 9999999999998543 4589999999999999999999999 999999999999999999999999999853211
Q ss_pred ----------------------CC-C-----c-------------------cccccccccccCccccccCCCCccchhHH
Q 001494 954 ----------------------DS-S-----N-------------------WTELAGTYGYVAPELAYTMKVTEKCDVYS 986 (1067)
Q Consensus 954 ----------------------~~-~-----~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dvws 986 (1067)
.. . . ....+|||.|||||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 00 0 0 01247999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCC--CCCCCcchHHHHHHHHHHHHhccCCCCCCCCC---HHHH
Q 001494 987 FGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPR--LPIPSHNVQEKLISFVEVAISCLDESPESRPT---MQKV 1061 (1067)
Q Consensus 987 lGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt---~~ev 1061 (1067)
+|||+|||+.|.+||....+.+ ....++..+ +..|.+. +...++.++|.+|+. ||++|-- +.||
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~--------T~rkI~nwr~~l~fP~~~--~~s~eA~DLI~rll~-d~~~RLG~~G~~EI 442 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQE--------TYRKIVNWRETLKFPEEV--DLSDEAKDLITRLLC-DPENRLGSKGAEEI 442 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHH--------HHHHHHHHhhhccCCCcC--cccHHHHHHHHHHhc-CHHHhcCcccHHHH
Confidence 9999999999999997544322 222222222 2222221 222458999999999 9999975 5554
Q ss_pred H
Q 001494 1062 S 1062 (1067)
Q Consensus 1062 l 1062 (1067)
.
T Consensus 443 K 443 (550)
T KOG0605|consen 443 K 443 (550)
T ss_pred h
Confidence 3
No 39
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-39 Score=356.89 Aligned_cols=245 Identities=23% Similarity=0.339 Sum_probs=210.5
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 872 (1067)
.++|...++||+|.||.|++++.+ +++.+|||++++...-.....+..+.|.+++... +||.++.++..|...+++|.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 467999999999999999999765 6889999999887655555677888899988777 59999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
||||+.||++..+.+ ...+++..+.-++..|+.||+|||++ ||||||||.+|||+|.+|++||+|||+++..-
T Consensus 447 vmey~~Ggdm~~~~~----~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIH----TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEecCCCcEEEEEe----cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 999999999544432 34589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
-.+...++++|||.|||||++.+..|+.++|.|||||++|||+.|..||.+.+ ..+.++.++......|...
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd--------Eee~FdsI~~d~~~yP~~l 591 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD--------EEEVFDSIVNDEVRYPRFL 591 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHhcCCCCCCCcc
Confidence 45566778999999999999999999999999999999999999999987433 3445556665555555444
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTM 1058 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~ 1058 (1067)
.. +...++++++.++|++|--+
T Consensus 592 s~----ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 592 SK----EAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred cH----HHHHHHHHHhccCcccccCC
Confidence 43 48899999999999999865
No 40
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.2e-38 Score=359.27 Aligned_cols=256 Identities=23% Similarity=0.422 Sum_probs=200.8
Q ss_pred hcCCCccCccccCCceeEEEEEE------CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeC
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHA 867 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 867 (1067)
.++|++.++||+|+||.||+|.. .+++.||||++.... .....+.+..|+.+++.+ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 35789999999999999999863 245689999987432 223346789999999999 899999999988765
Q ss_pred C-ceeEEEEeccCCCHHHHhcccCc-------------------------------------------------------
Q 001494 868 Q-HSFIVYEYLEMGSLAMILSNDAA------------------------------------------------------- 891 (1067)
Q Consensus 868 ~-~~~lv~E~~~~g~L~~~l~~~~~------------------------------------------------------- 891 (1067)
+ ..++||||+++|+|.+++.....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4 68999999999999999864221
Q ss_pred ----cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC--ccccccccc
Q 001494 892 ----AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS--NWTELAGTY 965 (1067)
Q Consensus 892 ----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~ 965 (1067)
..++++.++..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......+++
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 13478889999999999999999999 999999999999999999999999999986543222 112334567
Q ss_pred cccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCCCcchHHHHHHHHHH
Q 001494 966 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSHNVQEKLISFVEV 1043 (1067)
Q Consensus 966 ~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l 1043 (1067)
.|+|||++.+..++.++|||||||++|||++ |..||....... .....+... ....+.. ...++.++
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-------~~~~~~~~~~~~~~~~~----~~~~l~~l 309 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-------EFCQRLKDGTRMRAPEN----ATPEIYRI 309 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-------HHHHHHhcCCCCCCCCC----CCHHHHHH
Confidence 8999999998889999999999999999997 999987533211 011111111 1111221 22358899
Q ss_pred HHhccCCCCCCCCCHHHHHHHhc
Q 001494 1044 AISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1044 i~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
+.+||+.||++|||+.|+++.|+
T Consensus 310 i~~cl~~dp~~RPs~~el~~~l~ 332 (338)
T cd05102 310 MLACWQGDPKERPTFSALVEILG 332 (338)
T ss_pred HHHHccCChhhCcCHHHHHHHHH
Confidence 99999999999999999999885
No 41
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-39 Score=315.70 Aligned_cols=255 Identities=22% Similarity=0.370 Sum_probs=219.6
Q ss_pred HhcCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCC-----ChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEee
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPG-----EMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH 866 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 866 (1067)
.-..|...+.+|.|..++|.++ ...+|+.+|+|++...... .....++-.+|+.+++++ .||+|+.+.++|+.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3456888899999999999886 5678899999998543211 223345567899999998 69999999999999
Q ss_pred CCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 867 AQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 867 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
+..+++|+|.|+.|.|.|++.... .+++....+|++|+.+|++|||.+ .|||||+||+|||+|++.++||+|||
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccc
Confidence 999999999999999999996543 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccccccCcccccc------CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhh
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDE 1020 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1020 (1067)
+|+.+.+ +......||||+|.|||.+.. ..|+..+|+|+.|||+|-++.|.+||. ....-.....
T Consensus 169 Fa~~l~~-GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw--------HRkQmlMLR~ 239 (411)
T KOG0599|consen 169 FACQLEP-GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW--------HRKQMLMLRM 239 (411)
T ss_pred eeeccCC-chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh--------HHHHHHHHHH
Confidence 9998875 466788999999999998753 347889999999999999999999975 2233445667
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1021 ILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
++.+.+.+..+.+.+......++|.+|++.||++|.|+.|+++
T Consensus 240 ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 240 IMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 7788888888888888889999999999999999999999875
No 42
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.6e-39 Score=325.02 Aligned_cols=262 Identities=24% Similarity=0.318 Sum_probs=204.2
Q ss_pred hcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEe--eCCcee
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCS--HAQHSF 871 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~ 871 (1067)
.++|+...+|++|.||.||+|+ .++++.||+|+++..... ..+.-.-++||.++.+.+|||||.+-.+.. +-+..|
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek-~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK-EGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccccc-CCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 3568888999999999999996 458899999999876532 233345689999999999999999988764 445799
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+|||||++ +|...+.... .++...++..++.|+++|++|||++ .|+|||+|++|+|++..|.+||+|||+|+.+
T Consensus 154 ~VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhh
Confidence 99999986 7877775433 5688899999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhh--hhhccCCC---
Q 001494 952 KPDSSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIA--LDEILDPR--- 1025 (1067)
Q Consensus 952 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~--- 1025 (1067)
+.+...++..+-|.+|+|||.+.+.+ |+++.|+||+|||+.||+++++-|.+.............. -.+.+.+.
T Consensus 228 gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 228 GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 98888889999999999999888765 8999999999999999999998876544322111100000 00000000
Q ss_pred ------CCCCC---cc----hHH--HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1026 ------LPIPS---HN----VQE--KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1026 ------~~~~~---~~----~~~--~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+. .. ... ....-.+++...+..||.+|.||.|.++
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 00000 00 000 1235689999999999999999999875
No 43
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.1e-38 Score=356.28 Aligned_cols=244 Identities=23% Similarity=0.293 Sum_probs=200.5
Q ss_pred CccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCC
Q 001494 802 HCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMG 880 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 880 (1067)
+.||+|+||.||+|+. .+|+.||+|++.............+.+|+.++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999965 578999999987543223333456788999999999999999999999999999999999999
Q ss_pred CHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcccc
Q 001494 881 SLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTE 960 (1067)
Q Consensus 881 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 960 (1067)
+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRE---RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccc
Confidence 999888543 3588999999999999999999999 9999999999999999999999999999765433344455
Q ss_pred ccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHH
Q 001494 961 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISF 1040 (1067)
Q Consensus 961 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1040 (1067)
.+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.... .++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~~~~~~~~~p~~~~----~~~ 222 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEIRFPRTLS----PEA 222 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCCCC----HHH
Confidence 6799999999999998999999999999999999999999864322 1112222223333333332 348
Q ss_pred HHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1041 VEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1041 ~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
.+++.+||+.||++|| ++.++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 223 KSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 8999999999999999 7888875
No 44
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=343.30 Aligned_cols=245 Identities=21% Similarity=0.319 Sum_probs=199.4
Q ss_pred cCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee----CCceeEEEEe
Q 001494 801 EHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH----AQHSFIVYEY 876 (1067)
Q Consensus 801 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~E~ 876 (1067)
...+|+|++|.||+|.. +|+.||||++...........+.+.+|+.++++++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999988 589999999986544444445778899999999999999999999876 3468999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++|+|.+++... ..+++..+.+++.+++.|++|||+.. +++||||||+||+++.++.+||+|||+++......
T Consensus 104 ~~~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 104 CTRGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 9999999999643 35889999999999999999999742 78899999999999999999999999998654322
Q ss_pred ccccccccccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhcc--CCCCCCCCcc
Q 001494 957 NWTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEIL--DPRLPIPSHN 1032 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 1032 (1067)
....|++.|+|||.+.+ ..++.++|||||||++|||++|+.||+..... .....+. ..+...+..
T Consensus 178 --~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--------~~~~~i~~~~~~~~~~~~- 246 (283)
T PHA02988 178 --FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--------EIYDLIINKNNSLKLPLD- 246 (283)
T ss_pred --ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcCCCCCCCCc-
Confidence 23467899999999876 67899999999999999999999998754321 1111111 112222222
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...++.+++.+||+.||++|||+.|+++.|+
T Consensus 247 ---~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 247 ---CPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred ---CcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 2335899999999999999999999999886
No 45
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=334.95 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=204.6
Q ss_pred HhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCC-----------ChhHHHHHHHHHHHHhcCCCCeeeeee
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPG-----------EMTFQQEFLNEVKALTEIRHRNIVKFY 861 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~niv~l~ 861 (1067)
..++|+..+.||+|.||.|-+|+. .+++.||||++.+.... .....+...+||.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 357899999999999999999964 57999999998643110 111235788999999999999999999
Q ss_pred EEEeeC--CceeEEEEeccCCCHHHHhcccCccCC-CChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC
Q 001494 862 GFCSHA--QHSFIVYEYLEMGSLAMILSNDAAAED-LEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN 938 (1067)
Q Consensus 862 ~~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~ 938 (1067)
.+..+. +.+|||+|||..|.+... ...++ +++.++++++.++..||+|||.+ |||||||||+|+|++++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~----p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWC----PPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccC----CCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 998765 488999999998876532 22333 89999999999999999999999 999999999999999999
Q ss_pred CeEEeccccceecCCC-----CCccccccccccccCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCccccccc
Q 001494 939 EARVSDFGIAKFLKPD-----SSNWTELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPGDFISLISS 1009 (1067)
Q Consensus 939 ~~kl~DfG~a~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslGvil~elltg~~p~~~~~~~~~ 1009 (1067)
+|||+|||.+...... .......+|||.|+|||...++. .+.+.||||+||+||.|+.|+.||-.
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~------ 321 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD------ 321 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc------
Confidence 9999999999876322 22234578999999999887743 36789999999999999999999752
Q ss_pred cchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1010 SSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1010 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.......+.++...+.+|... +..+.+.++|.++|.+||++|.+..+|..
T Consensus 322 --~~~~~l~~KIvn~pL~fP~~p--e~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 322 --DFELELFDKIVNDPLEFPENP--EINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred --chHHHHHHHHhcCcccCCCcc--cccHHHHHHHHHHhhcChhheeehhhhee
Confidence 233445566777666666442 34456899999999999999999998864
No 46
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.2e-37 Score=347.60 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=200.4
Q ss_pred cCCCccCccccCCceeEEEEEECC-----------------CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELAS-----------------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 858 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 858 (1067)
.+|+..++||+|+||.||+|..++ +..||+|++.... ......++.+|++++++++||||+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCee
Confidence 568889999999999999986532 3469999987542 233456799999999999999999
Q ss_pred eeeEEEeeCCceeEEEEeccCCCHHHHhcccC----------------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCe
Q 001494 859 KFYGFCSHAQHSFIVYEYLEMGSLAMILSNDA----------------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPI 922 (1067)
Q Consensus 859 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 922 (1067)
++++++.+.+..++||||+++|+|.+++.... ....+++.++.+++.|++.|++|||+. +|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 99999999999999999999999999885421 113468889999999999999999999 99
Q ss_pred eecCCCCCceeeCCCCCeEEeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh--CC
Q 001494 923 VHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GK 998 (1067)
Q Consensus 923 vHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--g~ 998 (1067)
+||||||+||+++.++.+||+|||+++.+...... .....++..|+|||++.+..++.++||||||+++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999865433211 123345788999999988889999999999999999997 55
Q ss_pred CCCCccccccccchhhhhhhhhcc-CCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 999 HPGDFISLISSSSLNLNIALDEIL-DPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 999 ~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.||.......... .......... ......++. ....+.+++.+||+.||.+|||+.||.+.|+
T Consensus 240 ~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 240 QPYGELTDEQVIE-NAGEFFRDQGRQVYLFRPPP----CPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCcCCHHHHHH-HHHHHhhhccccccccCCCC----CCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 6765432211100 0000000000 001111111 2235899999999999999999999999885
No 47
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=334.87 Aligned_cols=258 Identities=27% Similarity=0.439 Sum_probs=199.7
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHh--cCCCCeeeeeeEEEeeCC----c
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALT--EIRHRNIVKFYGFCSHAQ----H 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~l~~~~~~~~----~ 869 (1067)
...+..+++|+|+||.||||++. ++.||||++... ..+.|..|-.+.+ .++|+||++++++-.... .
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 44566788999999999999988 589999998632 3466777777765 458999999999876665 8
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCC------CCCeeecCCCCCceeeCCCCCeEEe
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDC------FPPIVHRDISSKNVLLDFKNEARVS 943 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~ivHrDlk~~Nill~~~~~~kl~ 943 (1067)
+|+|+||.+.|+|.++++.. .++|....+|+..+++||+|||+.. .|+|+|||||++|||+..|+++.|+
T Consensus 283 ywLVt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 99999999999999999654 3899999999999999999999764 3789999999999999999999999
Q ss_pred ccccceecCCCC--CccccccccccccCccccccCC-C-----CccchhHHHHHHHHHHHhCCCCCC--ccc----cc--
Q 001494 944 DFGIAKFLKPDS--SNWTELAGTYGYVAPELAYTMK-V-----TEKCDVYSFGVLALEVIKGKHPGD--FIS----LI-- 1007 (1067)
Q Consensus 944 DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~-~-----~~~~DvwslGvil~elltg~~p~~--~~~----~~-- 1007 (1067)
|||+|..+.+.. ......+||.+|||||++.+.- + -.+.||||+|.++|||+++..-++ ..+ ++
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 999999887542 2334578999999999987653 2 236999999999999998654332 111 11
Q ss_pred -----cccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1008 -----SSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1008 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
..........+.+..+|.++...... ..+..+.+.+..||+.||+.|-|+.-|.+.+
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 11112222233444445544333333 4456689999999999999999999887765
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1e-37 Score=344.53 Aligned_cols=253 Identities=23% Similarity=0.282 Sum_probs=201.9
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|+..+.||+|+||.||+|.. .+|+.||+|++.............+.+|++++++++|++|+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67788999999999999965 57999999998654322223345678999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..... .
T Consensus 82 ~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~ 156 (285)
T cd05631 82 MNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-E 156 (285)
T ss_pred cCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-C
Confidence 99999988775322 23588999999999999999999999 9999999999999999999999999999875432 2
Q ss_pred ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHH
Q 001494 957 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEK 1036 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1067)
......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......+.......+.. .
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~----~ 228 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK----REEVDRRVKEDQEEYSEK----F 228 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh----HHHHHHHhhcccccCCcc----C
Confidence 23445789999999999999999999999999999999999999874332110 111111122222222222 2
Q ss_pred HHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 001494 1037 LISFVEVAISCLDESPESRPT-----MQKVSQ 1063 (1067)
Q Consensus 1037 ~~~l~~li~~cl~~dP~~Rpt-----~~evl~ 1063 (1067)
...+.+++.+||+.||++||+ ++++++
T Consensus 229 s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 229 SEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 234889999999999999997 788765
No 49
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.3e-38 Score=349.42 Aligned_cols=247 Identities=26% Similarity=0.335 Sum_probs=203.4
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||+|... +++.||+|++...........+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999764 78999999986432222234566889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNS---GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 999999999998543 3588899999999999999999999 9999999999999999999999999999865432
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+....
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~~~~~~~~~- 222 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--------FGIYEKILAGKLEFPRHLD- 222 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCcCCCccCC-
Confidence 2345789999999999988899999999999999999999999864332 1122223333333333322
Q ss_pred HHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPT-----MQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt-----~~evl~ 1063 (1067)
..+.+++.+||+.||.+||+ +.|+++
T Consensus 223 ---~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 223 ---LYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ---HHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 24889999999999999995 888765
No 50
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.2e-38 Score=351.41 Aligned_cols=241 Identities=24% Similarity=0.333 Sum_probs=196.8
Q ss_pred cccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCH
Q 001494 804 IGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSL 882 (1067)
Q Consensus 804 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 882 (1067)
||+|+||.||+|+.. +++.||+|++.............+.+|+.++++++||||+++++++.+.+..|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999764 6889999998643222333456788999999999999999999999999999999999999999
Q ss_pred HHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcccccc
Q 001494 883 AMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTELA 962 (1067)
Q Consensus 883 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 962 (1067)
.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.............
T Consensus 81 ~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 81 FHHLQRE---GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 9998543 3588999999999999999999999 999999999999999999999999999986544333444567
Q ss_pred ccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHH
Q 001494 963 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVE 1042 (1067)
Q Consensus 963 gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1042 (1067)
||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.... .++.+
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~----~~~~~ 222 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV--------NEMYRKILQEPLRFPDGFD----RDAKD 222 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH--------HHHHHHHHcCCCCCCCcCC----HHHHH
Confidence 99999999999998999999999999999999999999864322 1222233333333333222 34889
Q ss_pred HHHhccCCCCCCCCC---HHHHH
Q 001494 1043 VAISCLDESPESRPT---MQKVS 1062 (1067)
Q Consensus 1043 li~~cl~~dP~~Rpt---~~evl 1062 (1067)
++.+||+.||.+||+ +.|++
T Consensus 223 li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 223 LLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHcCCCHHHcCCCCCHHHHH
Confidence 999999999999985 45554
No 51
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-41 Score=379.83 Aligned_cols=507 Identities=30% Similarity=0.350 Sum_probs=344.3
Q ss_pred eecCCCcccCCCCcccccccccceecccccccccCCCCccccccccccccccccccccccCCCccCCCcccEEEEeccCC
Q 001494 102 LDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLL 181 (1067)
Q Consensus 102 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l 181 (1067)
+|.|+.++. .||..+-.-..|+.|++++|.+- ..|-+| .....+|+.||+++|++
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~-----------------------~~~~v~L~~l~lsnn~~ 57 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEF-----------------------VEKRVKLKSLDLSNNQI 57 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccc-cCchHH-----------------------hhheeeeEEeecccccc
Confidence 566666666 56665544444666666666654 222221 22233477777777777
Q ss_pred cCccCCccccccccceecccccccccccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccccCccc
Q 001494 182 SGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSL 261 (1067)
Q Consensus 182 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 261 (1067)
. .+|..+..+.+|+.|+++.|.|. ..|.+..++.+|++|.|.+|.+. ..|.++..+++|+.|++++|++. .+|..+
T Consensus 58 ~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i 133 (1081)
T KOG0618|consen 58 S-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVI 133 (1081)
T ss_pred c-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhH
Confidence 6 67777777777777777777776 66677777777777777777776 67777777777777777777776 667777
Q ss_pred cCccceeeEEEecccccccCCCccccCCcccEEEeccccccCCccccccCCccccEEeccCCCCcCCCCcccccCCCCCe
Q 001494 262 CNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSI 341 (1067)
Q Consensus 262 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 341 (1067)
..++.++.+..++|......+ ... .+.++|..|.+.+.++..+..+.. .|+|.+|.+. ...+..+.+|+.
T Consensus 134 ~~lt~~~~~~~s~N~~~~~lg----~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~ 203 (1081)
T KOG0618|consen 134 EVLTAEEELAASNNEKIQRLG----QTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEV 203 (1081)
T ss_pred HhhhHHHHHhhhcchhhhhhc----ccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhh
Confidence 777777777777772222222 222 667777777777766666666655 5777777776 234566677777
Q ss_pred EEecCccccccCCccccCCCCCCeEEccCCcCccccCcccCCCCCCCEEEccCCcccccCCCccccccCCcEEEcccCcC
Q 001494 342 LELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLSGSIPCEIGNLKSLSYLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSL 421 (1067)
Q Consensus 342 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 421 (1067)
|....|++... --.-++|+.|+.++|.++...+.. .-.+|+++++++|+++ .+|.+++.+.+|+.++..+|++
T Consensus 204 l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~~p--~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l 276 (1081)
T KOG0618|consen 204 LHCERNQLSEL----EISGPSLTALYADHNPLTTLDVHP--VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRL 276 (1081)
T ss_pred hhhhhcccceE----EecCcchheeeeccCcceeecccc--ccccceeeecchhhhh-cchHHHHhcccceEecccchhH
Confidence 77777777632 223456788888888877333322 2257888888888888 4568888888888888888888
Q ss_pred cccCchhhhCcCCCcEEeCCCCcccCCCCCCCCCCcccEEeccCcccccccccccccCCc-eeEEEcccccccCCCCCCC
Q 001494 422 SGAIPKEYRNLVKLTKLFLGDNQFQGPIPNLKNLTSLVRVHLDRNYLTSNISESFYIYPN-LTFIDLSYNNLYGEISSDW 500 (1067)
Q Consensus 422 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~-L~~L~Ls~N~l~~~~~~~~ 500 (1067)
+ .+|..+...++|+.|....|.+.-.++.+.+.++|+.|+|..|+|.+.+...|..... |..|..|.|++.......=
T Consensus 277 ~-~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e 355 (1081)
T KOG0618|consen 277 V-ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEE 355 (1081)
T ss_pred H-hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccc
Confidence 5 6777778888888888888888888888888888888888888888877765555544 6666666666654331111
Q ss_pred CCCCCcceEeccCCccCCCCCCcccCCCCCcEEEcCCCcccCcCcccccCCCccceeecccccccCCccccccccccccE
Q 001494 501 GRCPKLGALDFSKNNITGNIPPKIGYSSQLEVLDLSSNHVVGDIPAELGKLSFLIKLILAQNQLSGQLSPKLGLLVQLEH 580 (1067)
Q Consensus 501 ~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 580 (1067)
...+ .|+.|++.+|++++.....+.+..+|+.|+|++|+|.......+..+..|+.
T Consensus 356 ~~~~------------------------~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~Lee 411 (1081)
T KOG0618|consen 356 NNHA------------------------ALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEE 411 (1081)
T ss_pred hhhH------------------------HHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHH
Confidence 1223 4555555555555444444555555555555555555444555666667777
Q ss_pred EEccCCCCCCCcccccccccccceecccCcccccccchhhhhccccceeccccccCCCcchhhhhccccccccccccccc
Q 001494 581 LDLSSNNLSNAIPESLGNLVKLHYLNLSNNQFSWEIPIKLEELIHLSELDLSYNFLGRAIPSQICIMQSLEKLNLSHNSL 660 (1067)
Q Consensus 581 L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 660 (1067)
|+||+|+++ .+|..+..+..|++|....|++. ..| .+..+++|+.+|||.|+|+.........-++|++|||++|.=
T Consensus 412 L~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 412 LNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred Hhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 777777776 66777888888888888888887 455 788888888888888888775444444448899999999975
Q ss_pred ccccccccccCccccEEEcccC
Q 001494 661 SGVIPRCFEEMHALQCIDISYN 682 (1067)
Q Consensus 661 ~~~~~~~l~~l~~L~~l~l~~N 682 (1067)
....-..|..++++..+++.-|
T Consensus 489 l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 489 LVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred cccchhhhHHhhhhhheecccC
Confidence 5566677778888888888777
No 52
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-41 Score=381.89 Aligned_cols=505 Identities=31% Similarity=0.394 Sum_probs=357.6
Q ss_pred EeccCCccccCCCCcccccCccceeecCCCcccCCCCcccccccccceecccccccccCCCCcccccccccccccccccc
Q 001494 78 LDLWSNQLFGNIPPQIGNISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYL 157 (1067)
Q Consensus 78 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 157 (1067)
+|++..++. .||..+-.-..|..|+++.|.+....-+.+.+.-+|+.|||++|+++ ..|..+..+..|+.|.++.|.|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 566666764 67777766666888888888776332234455666899999998887 7888888889999999999988
Q ss_pred ccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccccCCCCCcccccceeecccCcCCCCCCccc
Q 001494 158 EDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSEL 237 (1067)
Q Consensus 158 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 237 (1067)
.. .|.+..++.+|++|.|.+|++. ..|.++..+++|++|+++.|.+. .+|..+..++.++.++.++|..... +
T Consensus 81 ~~-vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----l 153 (1081)
T KOG0618|consen 81 RS-VPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQR----L 153 (1081)
T ss_pred hh-Cchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhh----h
Confidence 87 5688888999999999999988 88999999999999999999987 8888999999999999999932222 3
Q ss_pred CCcccCCceEecCcccccccCccccCccceeeEEEecccccccCCCccccCCcccEEEeccccccCCccccccCCccccE
Q 001494 238 GNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIAF 317 (1067)
Q Consensus 238 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 317 (1067)
+... .+.+++..|.+.+.++..+..++. .|+|.+|.+.. -.+.++.+|+.|....|+++... -.-++|+.
T Consensus 154 g~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~---~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~ 223 (1081)
T KOG0618|consen 154 GQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV---LDLSNLANLEVLHCERNQLSELE----ISGPSLTA 223 (1081)
T ss_pred cccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhhh---hhhhhccchhhhhhhhcccceEE----ecCcchhe
Confidence 3332 788889999998888888877776 79999998882 35677888999999999887542 23467899
Q ss_pred EeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeEEccCCcCccccCcccCCCCCCCEEEccCCcc
Q 001494 318 LFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLSGSIPCEIGNLKSLSYLNLAFNKL 397 (1067)
Q Consensus 318 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 397 (1067)
|+.++|.++...+... -.+|+++++++|++++ +|++++.+.+|+.+...+|+++ .+|..+....+|++|.+.+|.+
T Consensus 224 L~a~~n~l~~~~~~p~--p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel 299 (1081)
T KOG0618|consen 224 LYADHNPLTTLDVHPV--PLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNEL 299 (1081)
T ss_pred eeeccCcceeeccccc--cccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhh
Confidence 9999999885543222 3579999999999984 6699999999999999999997 7888888899999999999999
Q ss_pred cccCCCccccccCCcEEEcccCcCcccCchhhhCcCC-CcEEeCCCCcccCCCC-CCCCCCcccEEeccCcccccccccc
Q 001494 398 TSSIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVK-LTKLFLGDNQFQGPIP-NLKNLTSLVRVHLDRNYLTSNISES 475 (1067)
Q Consensus 398 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~ 475 (1067)
. .+|....++++|++|+|..|+|....+..+..+.. |..|+.+.|++...+. .-...+.|+.|++.+|++++-....
T Consensus 300 ~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~ 378 (1081)
T KOG0618|consen 300 E-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPV 378 (1081)
T ss_pred h-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhh
Confidence 8 67777888999999999999998666655555544 7777777777765432 1123445666666666666655555
Q ss_pred cccCCceeEEEcccccccCCCCCCCCCCCCcceEeccCCccCCCCCCcccCCCCCcEEEcCCCcccCcCcccccCCCccc
Q 001494 476 FYIYPNLTFIDLSYNNLYGEISSDWGRCPKLGALDFSKNNITGNIPPKIGYSSQLEVLDLSSNHVVGDIPAELGKLSFLI 555 (1067)
Q Consensus 476 ~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 555 (1067)
+.++..|+.|+|++|++.......+.++..|++|+||+|+++ .+|..+..+..|++|...+|++. .+|
T Consensus 379 l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP---------- 446 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP---------- 446 (1081)
T ss_pred hccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech----------
Confidence 555666666666666665544445555555555555555555 44455555555555555555554 333
Q ss_pred eeecccccccCCccccccccccccEEEccCCCCCCC-cccccccccccceecccCcccccccchhhhhccccceeccccc
Q 001494 556 KLILAQNQLSGQLSPKLGLLVQLEHLDLSSNNLSNA-IPESLGNLVKLHYLNLSNNQFSWEIPIKLEELIHLSELDLSYN 634 (1067)
Q Consensus 556 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 634 (1067)
.+..+++|+.+|+|.|+|+.. +|..... ++|++|||++|.-....-..|..++++...++.-|
T Consensus 447 ---------------e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 447 ---------------ELAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred ---------------hhhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 444455555555555555432 2222222 56666666666532233344445555555555544
No 53
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=9.8e-38 Score=350.60 Aligned_cols=244 Identities=24% Similarity=0.295 Sum_probs=199.3
Q ss_pred CccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCC
Q 001494 802 HCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMG 880 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 880 (1067)
+.||+|+||.||+++. .+|+.||+|++.............+.+|+++++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999965 578999999987543222333456788999999999999999999999999999999999999
Q ss_pred CHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcccc
Q 001494 881 SLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTE 960 (1067)
Q Consensus 881 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 960 (1067)
+|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 81 ELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence 999888543 3588999999999999999999999 9999999999999999999999999998764433334445
Q ss_pred ccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHH
Q 001494 961 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISF 1040 (1067)
Q Consensus 961 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1040 (1067)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.... .++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--------~~~~~~~~~~~~~~p~~~~----~~~ 222 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEEIRFPRTLS----PEA 222 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCCCCCCCCCC----HHH
Confidence 6799999999999988999999999999999999999999864322 1112222222333333322 347
Q ss_pred HHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1041 VEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1041 ~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
.+++.+||+.||++|| ++.++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 223 KSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 8999999999999998 7888765
No 54
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.2e-37 Score=350.55 Aligned_cols=244 Identities=24% Similarity=0.301 Sum_probs=200.3
Q ss_pred CccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCC
Q 001494 802 HCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMG 880 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 880 (1067)
+.||+|+||.||+++. .+++.||+|++.............+.+|+++++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999965 578999999997543333334567889999999999999999999999999999999999999
Q ss_pred CHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcccc
Q 001494 881 SLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTE 960 (1067)
Q Consensus 881 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 960 (1067)
+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRE---RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence 999888543 3588999999999999999999999 9999999999999999999999999999764433333445
Q ss_pred ccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHH
Q 001494 961 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISF 1040 (1067)
Q Consensus 961 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1040 (1067)
..||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.... .++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~--------~~~~~~~~~~~~~~p~~~~----~~~ 222 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEDIKFPRTLS----ADA 222 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH--------HHHHHHhccCCccCCCCCC----HHH
Confidence 6799999999999988899999999999999999999999864322 1112222222333333332 348
Q ss_pred HHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1041 VEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1041 ~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
.+++.+||+.||.+|| ++.|+++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 223 KSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 8999999999999997 8888875
No 55
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-38 Score=344.51 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=215.3
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc-eeEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH-SFIV 873 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv 873 (1067)
++|...+++|+|+||.++.++++ +++.|++|++......+.. .+....|+.++++++|||||.+.+.|.+++. .+||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 57888999999999999998654 6788999999866554443 3467899999999999999999999999988 9999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|+|++||++.+.+.+.. ...++++++..++.|++.|+.|||++ .|+|||||+.||+++.++.|||+|||+|+.+.+
T Consensus 83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999997655 45689999999999999999999988 999999999999999999999999999999988
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCC-CCCCCcc
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPR-LPIPSHN 1032 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1032 (1067)
+.......+||+.||+||.+.+.+|..|+||||+||++|||++-+++|...+. ...+.++.... .+.|..+
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--------~~Li~ki~~~~~~Plp~~y 230 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--------SELILKINRGLYSPLPSMY 230 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--------HHHHHHHhhccCCCCCccc
Confidence 77667788999999999999999999999999999999999999999875443 22222333222 2233333
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
..++..++..|++.+|..||++.+++..
T Consensus 231 ----s~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 231 ----SSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ----cHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 3348999999999999999999999864
No 56
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=339.66 Aligned_cols=256 Identities=25% Similarity=0.386 Sum_probs=206.7
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
....++++||+|-||.|..++...+..||||+++.... .....+|.+|+++|.+++|||||+++|+|..++.+++|+|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~--~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT--KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccc--hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 34567899999999999999999889999999986533 3446899999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
||++|+|..++.+..... ...+.-.+|+.||+.|++||.+. ++||||+.++|+|+|.++++||+|||+++.+....
T Consensus 616 YmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCC
Confidence 999999999997654322 45566678999999999999999 99999999999999999999999999999665443
Q ss_pred Ccc--ccccccccccCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCccccccccchhhhhhhhhccCC-----CC
Q 001494 956 SNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPGDFISLISSSSLNLNIALDEILDP-----RL 1026 (1067)
Q Consensus 956 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 1026 (1067)
+.. ...+-+.+|||||.+.-++++.|+|||+|||++||+++ ...||........ .+...++.+. -+
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-----ven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-----VENAGEFFRDQGRQVVL 766 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-----HHhhhhhcCCCCcceec
Confidence 322 23455789999999999999999999999999999875 7889864332111 1111111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..|..+ ..++++++.+||..|-.+||+++++...|+
T Consensus 767 ~~P~~c----p~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 767 SRPPAC----PQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred cCCCcC----cHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 122222 235889999999999999999999988764
No 57
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=8.1e-38 Score=352.24 Aligned_cols=247 Identities=26% Similarity=0.313 Sum_probs=203.4
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|+..+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.++++++||||+++++++.+++..|+||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56889999999999999999764 68999999986432222233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKA---GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 999999999998543 3578889999999999999999999 9999999999999999999999999999876432
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+....
T Consensus 172 ~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~~~~p~~~~- 239 (329)
T PTZ00263 172 T---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--------RIYEKILAGRLKFPNWFD- 239 (329)
T ss_pred c---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH--------HHHHHHhcCCcCCCCCCC-
Confidence 2 2457899999999999988999999999999999999999998643321 122223333333333222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPT-----MQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt-----~~evl~ 1063 (1067)
..+.+++.+||+.||.+||+ +.++++
T Consensus 240 ---~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 240 ---GRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ---HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 24789999999999999997 577664
No 58
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=309.24 Aligned_cols=260 Identities=24% Similarity=0.349 Sum_probs=208.3
Q ss_pred hcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC-----C
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA-----Q 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 868 (1067)
.++|++.+.||+|||+-||.++ ..+++.||+|++.... .+..+..++|++..++++||||++++++...+ .
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 4679999999999999999996 6788999999997653 33467889999999999999999999887433 3
Q ss_pred ceeEEEEeccCCCHHHHhcccCc-cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAA-AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGI 947 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~ 947 (1067)
..|++++|+..|+|.+.+.+... +..+++.+.+.|+.++++||++||+.. |+++||||||.||++++++.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccC
Confidence 58999999999999999875443 447999999999999999999999983 3699999999999999999999999999
Q ss_pred ceecCCCCC---------ccccccccccccCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh
Q 001494 948 AKFLKPDSS---------NWTELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN 1015 (1067)
Q Consensus 948 a~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~ 1015 (1067)
++...-.-. .+.....|..|+|||.+.-. ..++++|||||||++|+|+.|..||+.... ....
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~-~GgS---- 250 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ-QGGS---- 250 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-cCCe----
Confidence 986542211 12334568899999987643 468899999999999999999999975432 1111
Q ss_pred hhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1016 IALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..-.+..+.+.+|.... .++.+.+++..|+++||.+||++.+++..++
T Consensus 251 -laLAv~n~q~s~P~~~~--yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 251 -LALAVQNAQISIPNSSR--YSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred -EEEeeeccccccCCCCC--ccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 11123334444443322 5557899999999999999999999998764
No 59
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-37 Score=343.24 Aligned_cols=253 Identities=26% Similarity=0.342 Sum_probs=221.7
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCceeE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 872 (1067)
...|+..+.||+|.||.||+++.+ +|+.+|+|++.+.........+.+.+|+.+|+++. |||||.+.++|++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 356888899999999999999655 59999999998765544334578899999999998 9999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC----CCeEEeccccc
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK----NEARVSDFGIA 948 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~----~~~kl~DfG~a 948 (1067)
|||++.||.|.+.+... .+++.++..++.|++.|++|||+. ||+|||+||+|+|+... +.+|++|||+|
T Consensus 114 vmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 99999999999998654 289999999999999999999999 99999999999999644 47999999999
Q ss_pred eecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCC
Q 001494 949 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPI 1028 (1067)
Q Consensus 949 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1067)
..... .......+||+.|+|||++...+|+.++||||+||++|.|++|..||..... ......+....+.+
T Consensus 187 ~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~--------~~~~~~i~~~~~~f 257 (382)
T KOG0032|consen 187 KFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETE--------FEIFLAILRGDFDF 257 (382)
T ss_pred eEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCCh--------hHHHHHHHcCCCCC
Confidence 98877 6677889999999999999999999999999999999999999999874432 22333666666667
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+.+.+......+.++++.|+..||.+|+|+.++++
T Consensus 258 ~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 258 TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 77777777788999999999999999999999986
No 60
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=350.40 Aligned_cols=247 Identities=23% Similarity=0.310 Sum_probs=202.5
Q ss_pred cCCCccCccccCCceeEEEEEECC--CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELAS--GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
++|+..+.||+|+||.||+|.... +..||+|++...........+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 568899999999999999997543 368999998643222223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN---KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 9999999999998643 3488999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+....
T Consensus 184 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~p~~~~ 252 (340)
T PTZ00426 184 R---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--------LIYQKILEGIIYFPKFLD 252 (340)
T ss_pred C---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--------HHHHHHhcCCCCCCCCCC
Confidence 2 23467999999999999888999999999999999999999998643321 112223333333333322
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
. .+.+++.+|++.||++|+ +++++++
T Consensus 253 ~----~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 253 N----NCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred H----HHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 2 378999999999999995 8888875
No 61
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=321.72 Aligned_cols=262 Identities=23% Similarity=0.357 Sum_probs=203.7
Q ss_pred HhcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee-----C
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH-----A 867 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~ 867 (1067)
....|...+.||+|+||.|+.+. ..+|+.||||++..+.... ...++..+|+++++.++|+||+.+.+++.. -
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~-~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQ-IDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhch-HHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 34456667899999999999984 5689999999998554433 346778899999999999999999998855 3
Q ss_pred CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccc
Q 001494 868 QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGI 947 (1067)
Q Consensus 868 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~ 947 (1067)
...|+|+|+| +.+|..+++.. ..++..++..++.|+++|+.|+|+. +|+|||+||.|++++.+...||+|||+
T Consensus 99 ~DvYiV~elM-etDL~~iik~~---~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELM-ETDLHQIIKSQ---QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHH-hhHHHHHHHcC---ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 4789999999 46999998543 3489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCC--CCCccccccccccccCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc-------chhhhhh
Q 001494 948 AKFLKP--DSSNWTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSS-------SLNLNIA 1017 (1067)
Q Consensus 948 a~~~~~--~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~-------~~~~~~~ 1017 (1067)
|+.... ....++..+.|.+|+|||.+. ...|+.+.||||.|||+.||++|++-|.+.+..... +......
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 998764 345568889999999999765 456999999999999999999999888664432110 0000111
Q ss_pred --------hhhccCCCCCCCCcc----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1018 --------LDEILDPRLPIPSHN----VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1018 --------~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+..-...+... .+.....+.+++.+||..||.+|+|++|+++
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 111111111111111 1122245889999999999999999999986
No 62
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.7e-37 Score=350.59 Aligned_cols=257 Identities=25% Similarity=0.423 Sum_probs=201.1
Q ss_pred hcCCCccCccccCCceeEEEEEE------CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeC
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHA 867 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 867 (1067)
.++|+..+.||+|+||.||+|.. .++..||+|++..... ....+.+.+|+++++.+ +|||||++++++.+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 35789999999999999999853 2345799999975432 22346788999999999 899999999999999
Q ss_pred CceeEEEEeccCCCHHHHhcccCc--------------------------------------------------------
Q 001494 868 QHSFIVYEYLEMGSLAMILSNDAA-------------------------------------------------------- 891 (1067)
Q Consensus 868 ~~~~lv~E~~~~g~L~~~l~~~~~-------------------------------------------------------- 891 (1067)
+..++||||+++|+|.+++.....
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 999999999999999998853211
Q ss_pred -----------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCc--c
Q 001494 892 -----------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSN--W 958 (1067)
Q Consensus 892 -----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~ 958 (1067)
..++++.++.+++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++........ .
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence 12478889999999999999999999 9999999999999999999999999999865433221 1
Q ss_pred ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHH
Q 001494 959 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKL 1037 (1067)
Q Consensus 959 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1067)
....+++.|||||++.+..++.++|||||||++|||++ |+.||....... .......... ....+... .
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~----~~~~~~~~~~--~~~~~~~~----~ 341 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS----KFYKMVKRGY--QMSRPDFA----P 341 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH----HHHHHHHccc--CccCCCCC----C
Confidence 12334668999999988889999999999999999997 999986432211 0011111111 11111111 2
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1038 ISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1038 ~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.++.+++.+||+.||++|||+.++++.|+
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~ 370 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFSQISQLIQ 370 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 35889999999999999999999999885
No 63
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.8e-37 Score=349.25 Aligned_cols=244 Identities=24% Similarity=0.295 Sum_probs=199.3
Q ss_pred CccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCC
Q 001494 802 HCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMG 880 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 880 (1067)
+.||+|+||.||+++. .+|+.||+|++.............+..|+++++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999965 578999999987543223334566788999999999999999999999999999999999999
Q ss_pred CHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 881 SLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHN-DCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 881 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
+|..++... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 81 ELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc
Confidence 999888543 358899999999999999999997 6 999999999999999999999999999986544434444
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.... .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~--------~~~~~~i~~~~~~~p~~~~----~~ 222 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEIRFPRTLS----PE 222 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH--------HHHHHHHhcCCCCCCCCCC----HH
Confidence 56799999999999988999999999999999999999999864322 1112222222333333332 24
Q ss_pred HHHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1040 FVEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
+.+++.+||+.||++|+ ++.++++
T Consensus 223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 88999999999999996 8988875
No 64
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.3e-37 Score=349.77 Aligned_cols=256 Identities=21% Similarity=0.296 Sum_probs=204.2
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.++||+|+||.||+|+.. +++.||+|++...........+.+..|+++++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999765 68999999987543222334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL---GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 999999999999543 3578899999999999999999999 999999999999999999999999999986543
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.......... ...........+....+. .
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~---~ 227 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE-NLKYWKETLQRPVYDDPR---F 227 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH-HHHhccccccCCCCCccc---c
Confidence 2345678999999999998899999999999999999999999987543211100 000000001111111000 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
....++.+++.+||+.+|++||++.++++.
T Consensus 228 ~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 228 NLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 123358899999999999999999999863
No 65
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.8e-37 Score=346.04 Aligned_cols=244 Identities=25% Similarity=0.367 Sum_probs=199.0
Q ss_pred CccccCCceeEEEEEE----CCCcEEEEEEeCCCCC-CChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 802 HCIGKGGQGSVYKVEL----ASGEIIAVKKFHSPLP-GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
++||+|+||.||+++. .+++.||+|++..... ........+..|+.+++.++||||+++++++.+++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999865 3678999999864321 1122235577899999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++++|.+++... ..+.+..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLERE---GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 9999999988543 3478888899999999999999999 999999999999999999999999999976544333
Q ss_pred ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHH
Q 001494 957 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEK 1036 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1067)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+....
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~--- 224 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR--------KKTIDKILKGKLNLPPYLT--- 224 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCCCC---
Confidence 34456799999999999988899999999999999999999999874332 1223333334444443332
Q ss_pred HHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1037 LISFVEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1037 ~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
.++.+++.+||+.+|++|| ++.++++
T Consensus 225 -~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 225 -PEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -HHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 2488999999999999999 7888765
No 66
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.4e-37 Score=320.71 Aligned_cols=264 Identities=21% Similarity=0.310 Sum_probs=203.8
Q ss_pred cCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCe-eeeeeEEEeeCC-----
Q 001494 796 NDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN-IVKFYGFCSHAQ----- 868 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~----- 868 (1067)
..|+..++||+|+||+||+|+ ..+|+.||+|++......+ .......+|+.+++.++|+| ||++++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~E-G~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEE-GVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEecccccc-CCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 456777889999999999995 5688999999998654421 23355689999999999999 999999998877
Q ss_pred -ceeEEEEeccCCCHHHHhcccCcc-CCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 869 -HSFIVYEYLEMGSLAMILSNDAAA-EDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 869 -~~~lv~E~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
..++||||++. +|..++...... ..++...+..++.||++|++|||++ +|+||||||+||+++.+|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 78999999974 888888543321 3466688999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh-------hhhh
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL-------NIAL 1018 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~-------~~~~ 1018 (1067)
+|+...-+...++..++|.+|+|||++.+. .|+...||||+|||++||++++.-|.+........... ....
T Consensus 166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 999877666667888999999999998887 69999999999999999999988776544321110000 0000
Q ss_pred hhc--------cCCCCCCCCcchHHHH---HHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1019 DEI--------LDPRLPIPSHNVQEKL---ISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1019 ~~~--------~~~~~~~~~~~~~~~~---~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
..+ ..+.+..+........ ....+++.+|++.+|.+|.|+..+++.
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 000 0111111111111111 257899999999999999999998864
No 67
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-37 Score=322.02 Aligned_cols=259 Identities=26% Similarity=0.380 Sum_probs=196.6
Q ss_pred hcCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHH--hcCCCCeeeeeeEEEeeCC----
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKAL--TEIRHRNIVKFYGFCSHAQ---- 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l--~~l~h~niv~l~~~~~~~~---- 868 (1067)
.++....+.||+|.||+||+|+++ |+.||||++... ++ +.+.+|.++. ..++|+||..+++.-..+.
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr--dE----~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR--DE----RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEeccc--ch----hhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 457788899999999999999998 999999999743 22 3444555554 4569999999998865443
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhC-----CCCCeeecCCCCCceeeCCCCCeEEe
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHND-----CFPPIVHRDISSKNVLLDFKNEARVS 943 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivHrDlk~~Nill~~~~~~kl~ 943 (1067)
++|+|.||.+.|+|+|++.+ ..++....++++..+|.||+|||.. ..|.|+|||||+.|||+..++.+.|+
T Consensus 283 QLwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 68999999999999999965 3488999999999999999999954 56899999999999999999999999
Q ss_pred ccccceecCCCCC----ccccccccccccCccccccCC----C--CccchhHHHHHHHHHHHhC----------CCCCCc
Q 001494 944 DFGIAKFLKPDSS----NWTELAGTYGYVAPELAYTMK----V--TEKCDVYSFGVLALEVIKG----------KHPGDF 1003 (1067)
Q Consensus 944 DfG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~----~--~~~~DvwslGvil~elltg----------~~p~~~ 1003 (1067)
|+|+|........ .....+||.+|||||++...- + -..+||||||.++||+..+ +.||..
T Consensus 359 DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd 438 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYD 438 (513)
T ss_pred eceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCccc
Confidence 9999987665432 234578999999999986432 1 2359999999999999863 345543
Q ss_pred cccc-cccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1004 ISLI-SSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1004 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
..+. ............+.++|.++..+. ..+.+..+.++|+.||..+|..|-||-.+.+.+
T Consensus 439 ~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~-s~~~l~~m~klMkeCW~~Np~aRltALriKKtl 500 (513)
T KOG2052|consen 439 VVPSDPSFEEMRKVVCVQKLRPNIPNRWK-SDPALRVMAKLMKECWYANPAARLTALRIKKTL 500 (513)
T ss_pred CCCCCCCHHHHhcceeecccCCCCCcccc-cCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHH
Confidence 2221 111111111122233343333332 346778899999999999999999998887655
No 68
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.7e-37 Score=336.13 Aligned_cols=249 Identities=24% Similarity=0.293 Sum_probs=198.7
Q ss_pred cccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCH
Q 001494 804 IGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSL 882 (1067)
Q Consensus 804 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 882 (1067)
||+|+||+||++.. .+++.||+|++...........+.+..|+++++.++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999865 47899999998643322222345678899999999999999999999999999999999999999
Q ss_pred HHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccccc
Q 001494 883 AMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTEL 961 (1067)
Q Consensus 883 ~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 961 (1067)
.+.+... .....+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++.............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 8877432 2344689999999999999999999999 99999999999999999999999999998765544444456
Q ss_pred cccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHH
Q 001494 962 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFV 1041 (1067)
Q Consensus 962 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1041 (1067)
.||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+.......+.. ....+.
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~ 229 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQRILNDSVTYPDK----FSPASK 229 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch----hHHHHHHhhcccCCCCccc----CCHHHH
Confidence 78999999999999999999999999999999999999986432211 1111122222222222222 233588
Q ss_pred HHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1042 EVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1042 ~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
+++.+||+.||++|| ++.++++
T Consensus 230 ~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 230 SFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 999999999999999 6677764
No 69
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8e-37 Score=349.81 Aligned_cols=256 Identities=25% Similarity=0.430 Sum_probs=200.9
Q ss_pred cCCCccCccccCCceeEEEEEE------CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCC
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQ 868 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 868 (1067)
++|+..++||+|+||.||+|+. .++..||||++..... ....+.+.+|+++++.+ +||||+++++++.+.+
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 4688899999999999999853 3466899999864322 23346788999999999 8999999999999999
Q ss_pred ceeEEEEeccCCCHHHHhcccCc---------------------------------------------------------
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAA--------------------------------------------------------- 891 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~--------------------------------------------------------- 891 (1067)
..++||||+++|+|.+++.....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 99999999999999998854221
Q ss_pred ---------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 892 ---------------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 892 ---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
...+++..+.+++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 12478889999999999999999999 999999999999999999999999999987654322
Q ss_pred c--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 957 N--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 957 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
. .....++..|+|||++.+..++.++|||||||++|||++ |..||....... ........-. ....+...
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~----~~~~~~~~~~--~~~~~~~~- 342 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS----KFYKMIKEGY--RMLSPECA- 342 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH----HHHHHHHhCc--cCCCCCCC-
Confidence 1 112334667999999999999999999999999999998 888886432211 0001111110 11111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..++.+++.+||+.||++||++.|+++.|+
T Consensus 343 ---~~~l~~li~~cl~~dP~~RPs~~eil~~l~ 372 (375)
T cd05104 343 ---PSEMYDIMKSCWDADPLKRPTFKQIVQLIE 372 (375)
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 235889999999999999999999999986
No 70
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-39 Score=319.44 Aligned_cols=248 Identities=29% Similarity=0.444 Sum_probs=208.6
Q ss_pred CCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|+++++||+|+||.||+| ...+|+.+|||++... ...+++..|+.+|++.+.|+||+++|.|.....+|+||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 567789999999999998 5668999999998653 2368899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
|..|+..++++ ..++++++.++..|.+..++||+|||.. .-+|||||+.|||++-+|.+|++|||.|.++.+.-.
T Consensus 110 CGAGSiSDI~R--~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 110 CGAGSISDIMR--ARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred cCCCcHHHHHH--HhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHH
Confidence 99999999995 4456899999999999999999999998 789999999999999999999999999988776555
Q ss_pred ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHH
Q 001494 957 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEK 1036 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1067)
......|||-|||||++..-.|+.++||||+|+...||..|++||...-+....- .+..-..|.+.. ..+-
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF-----MIPT~PPPTF~K----PE~W 255 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF-----MIPTKPPPTFKK----PEEW 255 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE-----eccCCCCCCCCC----hHhh
Confidence 5667889999999999999999999999999999999999999987554321110 000011111221 2233
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1037 LISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1037 ~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
+.++-++++.|+-+.|++|.||.++++.
T Consensus 256 S~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 256 SSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 3458999999999999999999998763
No 71
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.2e-37 Score=345.69 Aligned_cols=252 Identities=23% Similarity=0.349 Sum_probs=200.1
Q ss_pred CccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
++||+|+||.||+|+.. +++.||+|++...........+.+..|..+++.+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999654 6889999999754333333445678899999888 799999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 9999888543 3589999999999999999999999 999999999999999999999999999975433333445
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccch-hhhhhhhhccCCCCCCCCcchHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL-NLNIALDEILDPRLPIPSHNVQEKLI 1038 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1067)
...||+.|+|||++.+..++.++||||+||++|||++|+.||+.......... ........+.......|.... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~ 230 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLS----V 230 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCC----H
Confidence 56899999999999998999999999999999999999999974332111111 111112223333333343332 2
Q ss_pred HHHHHHHhccCCCCCCCCC------HHHHHH
Q 001494 1039 SFVEVAISCLDESPESRPT------MQKVSQ 1063 (1067)
Q Consensus 1039 ~l~~li~~cl~~dP~~Rpt------~~evl~ 1063 (1067)
++.+++.+|++.||.+||+ +.++++
T Consensus 231 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 231 KASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 4789999999999999997 566653
No 72
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.1e-37 Score=345.05 Aligned_cols=239 Identities=24% Similarity=0.360 Sum_probs=194.2
Q ss_pred CccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+.||+|+||+||+|+.. +++.||+|++...........+.+..|..+++.+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999764 6889999998643222222345677888888776 699999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~i~~~---~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKS---RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred chHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 9999888543 3488999999999999999999999 999999999999999999999999999986543334445
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.... .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~~----~~ 222 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDEVVYPTWLS----QD 222 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCCCCCCCCCC----HH
Confidence 56799999999999988899999999999999999999999874332 1122223333333332222 24
Q ss_pred HHHHHHhccCCCCCCCCCH
Q 001494 1040 FVEVAISCLDESPESRPTM 1058 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~ 1058 (1067)
+.+++.+|++.||++||++
T Consensus 223 ~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 223 AVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHcccCHHHCCCC
Confidence 7899999999999999998
No 73
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.1e-37 Score=344.89 Aligned_cols=247 Identities=24% Similarity=0.347 Sum_probs=196.6
Q ss_pred CccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+.||+|+||.||+|+. .+++.||+|++...........+.+..|+.++.++ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999975 46889999999764333334456678888888776 899999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|..++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 9999888543 3588999999999999999999999 999999999999999999999999999976443333344
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccch-hhhhhhhhccCCCCCCCCcchHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL-NLNIALDEILDPRLPIPSHNVQEKLI 1038 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1067)
...||+.|+|||++.+..++.++|||||||++|||++|+.||+.......... ........+.......|.... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~----~ 230 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS----V 230 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCC----H
Confidence 56799999999999999999999999999999999999999864322111111 111112223333333443332 3
Q ss_pred HHHHHHHhccCCCCCCCCCH
Q 001494 1039 SFVEVAISCLDESPESRPTM 1058 (1067)
Q Consensus 1039 ~l~~li~~cl~~dP~~Rpt~ 1058 (1067)
++.+++.+||+.||++||++
T Consensus 231 ~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 231 KAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHHHhcCCHHHcCCC
Confidence 47899999999999999984
No 74
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.3e-36 Score=332.18 Aligned_cols=252 Identities=23% Similarity=0.358 Sum_probs=201.5
Q ss_pred cCCCccCccccCCceeEEEEEEC----CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCcee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 871 (1067)
.+|++.+.||+|+||.||+|... .+..||+|++..... ....+.+.+|+..+++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 46888999999999999998653 456899999875422 233567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+||||+++|+|.+++... ...+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++|||.+...
T Consensus 83 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 83 IVTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 999999999999998643 24689999999999999999999999 9999999999999999999999999987654
Q ss_pred CCCCCc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCC
Q 001494 952 KPDSSN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPI 1028 (1067)
Q Consensus 952 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1028 (1067)
...... .....++..|+|||.+.+..++.++|||||||++||+++ |+.||....... ....+.+. ..+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 229 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--------VIKAVEDGFRLPA 229 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------HHHHHHCCCCCCC
Confidence 322111 112334678999999999999999999999999999875 999986443211 11111111 1122
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
+.. ....+.+++.+||+.+|++||++.|+.+.|+
T Consensus 230 ~~~----~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~ 263 (266)
T cd05064 230 PRN----CPNLLHQLMLDCWQKERGERPRFSQIHSILS 263 (266)
T ss_pred CCC----CCHHHHHHHHHHcCCCchhCCCHHHHHHHHH
Confidence 222 2335889999999999999999999999874
No 75
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.4e-37 Score=344.64 Aligned_cols=244 Identities=22% Similarity=0.333 Sum_probs=197.5
Q ss_pred CccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
++||+|+||.||+|+.. +++.||+|++...........+.+..|.++++.+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999764 6789999998753222223345677888888766 799999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|...+... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 81 GDLMFQIQRS---RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 9999888543 3488899999999999999999999 999999999999999999999999999986544444445
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...||+.|+|||++.+..++.++||||+||++|||++|+.||+.... ......+.......+.... .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~--------~~~~~~i~~~~~~~p~~~~----~~ 222 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE--------DDLFESILHDDVLYPVWLS----KE 222 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCCCC----HH
Confidence 56799999999999988899999999999999999999999874432 1222223333333332222 34
Q ss_pred HHHHHHhccCCCCCCCC-------CHHHHHH
Q 001494 1040 FVEVAISCLDESPESRP-------TMQKVSQ 1063 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rp-------t~~evl~ 1063 (1067)
+.+++.+||+.||++|| ++.++++
T Consensus 223 ~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 223 AVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 88999999999999999 7777764
No 76
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=7.6e-37 Score=343.93 Aligned_cols=244 Identities=23% Similarity=0.302 Sum_probs=197.2
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCC-CeeeeeeEEEeeCCceeEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH-RNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 874 (1067)
+|+..+.||+|+||.||+|+.. +++.||+|++...........+.+..|+++++.++| ++|+.+++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999654 678999999875332222334667889999999976 56888999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV---GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 999999999888543 3478899999999999999999999 9999999999999999999999999998754333
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........||+.|+|||++.+..++.++||||+||++|||++|+.||+.... ......+.......+....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~~~~~~~~~~- 225 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--------DELFQSIMEHNVSYPKSLS- 225 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCCCCC-
Confidence 3334456799999999999999999999999999999999999999874432 1112222223333333222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTM 1058 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~ 1058 (1067)
.++.+++.+||+.||.+|+++
T Consensus 226 ---~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 226 ---KEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ---HHHHHHHHHHhhcCHHHcCCC
Confidence 347899999999999999976
No 77
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=6.5e-37 Score=344.48 Aligned_cols=247 Identities=23% Similarity=0.327 Sum_probs=196.8
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHH---hcCCCCeeeeeeEEEeeCCceeEE
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKAL---TEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
|++.+.||+|+||.||+|+. .+++.||||++...........+.+..|++++ +.++||||+++++++.+.+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56788999999999999965 47899999998743222222345566666654 567899999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++++|...++. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 999999999988743 3589999999999999999999999 999999999999999999999999999876443
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.........|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+....
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~~~~p~~~~ 225 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--------EVFDSIVNDEVRYPRFLS 225 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCCCCC
Confidence 334445567999999999999888999999999999999999999998643321 112222222222332222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
..+.+++.+||+.||.+|| ++.++++
T Consensus 226 ----~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 226 ----REAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ----HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 3478999999999999999 4666654
No 78
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=6e-37 Score=332.56 Aligned_cols=248 Identities=27% Similarity=0.451 Sum_probs=202.6
Q ss_pred CCccCccccCCceeEEEEEEC---CCc--EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeE
Q 001494 798 FDDEHCIGKGGQGSVYKVELA---SGE--IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~---~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 872 (1067)
....++||.|-||.||+|.+- .|+ .||||..+... +....+.|+.|+.+|+.++|||||+++|+|.+ ...|+
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 445688999999999998643 333 48888887543 33346889999999999999999999999976 57899
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
|||.++.|.|..+++.. ...++......++.||+.|++|||+. ..|||||..+|||+....-||++|||+++++.
T Consensus 468 vmEL~~~GELr~yLq~n--k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQN--KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred EEecccchhHHHHHHhc--cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 99999999999999643 34588888999999999999999999 99999999999999999999999999999987
Q ss_pred CCCCccc-cccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhcc-CCCCCCC
Q 001494 953 PDSSNWT-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEIL-DPRLPIP 1029 (1067)
Q Consensus 953 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1029 (1067)
.+..... ...-+..|||||.+.-.+++.++|||.|||++||++. |..||.+...-.. +..+. ..+++.|
T Consensus 543 d~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV--------I~~iEnGeRlP~P 614 (974)
T KOG4257|consen 543 DDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV--------IGHIENGERLPCP 614 (974)
T ss_pred ccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce--------EEEecCCCCCCCC
Confidence 6644322 2223568999999999999999999999999999986 9999986553221 11111 2345555
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
+.+.+ .++.++.+||+.||.+||++.|+...|
T Consensus 615 ~nCPp----~LYslmskcWayeP~kRPrftei~~~l 646 (974)
T KOG4257|consen 615 PNCPP----ALYSLMSKCWAYEPSKRPRFTEIKAIL 646 (974)
T ss_pred CCCCh----HHHHHHHHHhccCcccCCcHHHHHHHH
Confidence 44433 489999999999999999999998776
No 79
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8.9e-37 Score=340.34 Aligned_cols=261 Identities=20% Similarity=0.307 Sum_probs=197.9
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
.++|+..++||+|+||.||+|+.. +++.||+|++....... ....+.+|+.+++.++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG--TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc--cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 467999999999999999999765 78999999987543222 234567899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||++ +++.+++... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 82 FEYVH-TDLCQYMDKH--PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred EECCC-cCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 99996 5676666432 24578899999999999999999999 999999999999999999999999999986544
Q ss_pred CCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhh--------h------
Q 001494 954 DSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIA--------L------ 1018 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~--------~------ 1018 (1067)
.........+++.|+|||++.+ ..++.++||||+||++|||++|+.||................ .
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 156 PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhc
Confidence 4344455678999999998765 457889999999999999999999997543211100000000 0
Q ss_pred hhccCCCCCC-CCcchHH------HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1019 DEILDPRLPI-PSHNVQE------KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1019 ~~~~~~~~~~-~~~~~~~------~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.......... .+..... ....+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000000000 0000000 1134789999999999999999999985
No 80
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.8e-37 Score=341.75 Aligned_cols=243 Identities=26% Similarity=0.365 Sum_probs=192.9
Q ss_pred CccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhc-CCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTE-IRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+.||+|+||.||+|+. .+++.||+|++...........+.+..|..++.. .+||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999975 4688999999875432222233455666666654 4899999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 81 GDLMFHIQSS---GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 9999888543 3588899999999999999999999 999999999999999999999999999986544434445
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
..+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.... .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~~----~~ 222 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--------DELFDSILNDRPHFPRWIS----KE 222 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCCCCC----HH
Confidence 56799999999999988899999999999999999999999874332 1111222222222222222 24
Q ss_pred HHHHHHhccCCCCCCCCCHH-HHH
Q 001494 1040 FVEVAISCLDESPESRPTMQ-KVS 1062 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~-evl 1062 (1067)
+.+++.+||+.+|++||++. ++.
T Consensus 223 ~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 223 AKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHH
Confidence 78999999999999999875 443
No 81
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-37 Score=353.80 Aligned_cols=251 Identities=22% Similarity=0.339 Sum_probs=206.9
Q ss_pred cCCCccCccccCCceeEEEEEECCC-cEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeE-EEee------
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASG-EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYG-FCSH------ 866 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~-~~~~------ 866 (1067)
.++++.+.|.+|||+.||.|+...+ ..||+|++... +....+.+.+|+++|+.|+ |||||.++| ....
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 4567889999999999999987766 99999999764 4455788999999999996 999999999 3321
Q ss_pred CCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 867 AQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 867 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
..+++|.||||.||.|-+++....... +++.++++|+.++++|+++||.. .|+|||||||-+||||+.+|+.||||||
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 236789999999999999997544434 99999999999999999999987 5689999999999999999999999999
Q ss_pred cceecCCCCCcc---------ccccccccccCcccc---ccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh
Q 001494 947 IAKFLKPDSSNW---------TELAGTYGYVAPELA---YTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL 1014 (1067)
Q Consensus 947 ~a~~~~~~~~~~---------~~~~gt~~y~aPE~~---~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~ 1014 (1067)
.|+-........ -...-|+-|+|||++ .+.+.++|+|||++||+||-|+.+..||+....
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-------- 263 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-------- 263 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------
Confidence 997443222111 112458999999975 466789999999999999999999999984422
Q ss_pred hhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1015 NIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
-.|+...+.+|+. +.+...+.+||+.||+.||.+||++.+|++++
T Consensus 264 ----laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 264 ----LAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred ----eeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 2456666666653 35566799999999999999999999999875
No 82
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.1e-36 Score=336.78 Aligned_cols=260 Identities=19% Similarity=0.274 Sum_probs=198.9
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..++||+|+||.||+|+.. +++.||+|++...... .....+.+|++++++++||||+++++++.+++..++||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC--CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 56889999999999999999654 7899999998654322 22356778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++ +|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 83 EYLDS-DLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred eCCCc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 99985 888877432 23478899999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchh-------hhhh---------
Q 001494 955 SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN-------LNIA--------- 1017 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~-------~~~~--------- 1017 (1067)
........+++.|+|||.+.+ ..++.++||||+||++|||++|+.||............ ....
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 444445678999999998865 45899999999999999999999998643321110000 0000
Q ss_pred hhhccCCCCCCCC--cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1018 LDEILDPRLPIPS--HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1018 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
......+...... ........++.+++.+|++.||.+|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0001111110000 000011235789999999999999999999985
No 83
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=9e-37 Score=343.19 Aligned_cols=244 Identities=22% Similarity=0.305 Sum_probs=198.3
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
+|+..+.||+|+||.||+|+.. +++.||+|++...........+.+..|..++..+ +||+|+.+++++.+.+..|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999655 6789999998754322223345567788888777 5899999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV---GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 999999999888543 3488899999999999999999999 9999999999999999999999999999865433
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........||+.|+|||++.+..++.++|||||||++|||++|+.||+.... ......+.......+....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--------~~~~~~i~~~~~~~p~~~s- 225 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPKSMS- 225 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCCcCC-
Confidence 3444556799999999999999999999999999999999999999874432 1122223333333333322
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTM 1058 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~ 1058 (1067)
.++.+++.+|++.+|++|+++
T Consensus 226 ---~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 226 ---KEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ---HHHHHHHHHHcccCHHhcCCC
Confidence 347899999999999999985
No 84
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.8e-37 Score=319.99 Aligned_cols=254 Identities=22% Similarity=0.272 Sum_probs=212.3
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
+.|+..+.||+|.-|+||.++.+ ++..+|+|++.+..........+...|.+|++.++||.++.+++.++.++..|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 34677789999999999999876 45899999997654444444566778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC-
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP- 953 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~- 953 (1067)
|||+||+|....+++ ..+.+++..+.-++.+++-||+|||-. |||+||+||+||||.++|++.++||.++.....
T Consensus 157 eyCpGGdL~~LrqkQ-p~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQ-PGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhC-CCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 999999999888654 456689999999999999999999999 999999999999999999999999998753210
Q ss_pred --------------------------------C-C----------------------CccccccccccccCccccccCCC
Q 001494 954 --------------------------------D-S----------------------SNWTELAGTYGYVAPELAYTMKV 978 (1067)
Q Consensus 954 --------------------------------~-~----------------------~~~~~~~gt~~y~aPE~~~~~~~ 978 (1067)
. . .....++||-.|.|||++.+..+
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 01123579999999999999999
Q ss_pred CccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCC-
Q 001494 979 TEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPT- 1057 (1067)
Q Consensus 979 ~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt- 1057 (1067)
+.++|.|+|||++|||+.|..||.+.. ..+.+..++...+.+|... +.+..++++|++.|.+||.+|..
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~--------~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSN--------NKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCC--------chhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhcc
Confidence 999999999999999999999987433 3555666776666666543 44567899999999999999987
Q ss_pred ---HHHHHH
Q 001494 1058 ---MQKVSQ 1063 (1067)
Q Consensus 1058 ---~~evl~ 1063 (1067)
|+||.+
T Consensus 383 ~rGA~eIK~ 391 (459)
T KOG0610|consen 383 KRGAAEIKR 391 (459)
T ss_pred ccchHHhhc
Confidence 777654
No 85
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.6e-36 Score=345.53 Aligned_cols=248 Identities=25% Similarity=0.382 Sum_probs=194.6
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|+..++||+|+||.||+|+.. +++.||||++.... .....+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 45667789999999999999754 78999999986432 2334567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.... ...+..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 152 e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 152 EFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred ecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999986432 245677888999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhcc-CCCCCC
Q 001494 955 SSNWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEIL-DPRLPI 1028 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 1028 (1067)
........||..|+|||++.. ...+.++|||||||++|||++|+.||....... .......+. ......
T Consensus 222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~ 296 (353)
T PLN00034 222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD-----WASLMCAICMSQPPEA 296 (353)
T ss_pred cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-----HHHHHHHHhccCCCCC
Confidence 333345679999999998743 224568999999999999999999986322110 011111111 111111
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
+. ....++.+++.+||+.||++|||+.|+++.
T Consensus 297 ~~----~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 297 PA----TASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CC----ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 223358999999999999999999999863
No 86
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.4e-36 Score=330.73 Aligned_cols=260 Identities=21% Similarity=0.313 Sum_probs=208.4
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.+.||+|+||.||+|+. .+++.||||.+.............+.+|+++++.++||||+++++++.+.+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4788999999999999999965 478999999886543334444567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccC-ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 875 EYLEMGSLAMILSNDA-AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
||+++++|.+++.... ....+++..+..++.|+++|++|||++ +++||||||+||+++.++.++|+|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999998885322 234578899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.........+++.|+|||.+.+..++.++||||+|+++|||++|+.||...... .............+. ...
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~-----~~~ 230 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSLCQKIEQCDYPP-----LPT 230 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHHHHHHhcCCCCC-----CCh
Confidence 433334456888999999998888999999999999999999999997532210 001111111111111 111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
......+.+++.+||+.+|++||++.+|++.++
T Consensus 231 ~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~ 263 (267)
T cd08228 231 EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAK 263 (267)
T ss_pred hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHH
Confidence 223346899999999999999999999999875
No 87
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-36 Score=341.17 Aligned_cols=258 Identities=25% Similarity=0.354 Sum_probs=202.6
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||+++.. ++..||+|++.... .....+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 67899999999999999999754 78899999987532 2334567999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... ..+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 83 EHMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred ecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 999999999998543 34788999999999999999999862 6999999999999999999999999999765432
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh--------------------
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL-------------------- 1014 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~-------------------- 1014 (1067)
......|++.|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 158 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (331)
T cd06649 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRP 235 (331)
T ss_pred --ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccc
Confidence 2234578999999999998889999999999999999999999986432211000000
Q ss_pred ------------------hhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1015 ------------------NIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1015 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
......+..... +.........++.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 236 PGRPVSGHGMDSRPAMAIFELLDYIVNEPP--PKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccccccccccccchhHHHHHHHHHhCCC--cCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000000 000001123458999999999999999999999864
No 88
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.2e-36 Score=328.64 Aligned_cols=250 Identities=27% Similarity=0.451 Sum_probs=202.2
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
++|+..+.||+|+||.||+++.+++..+|+|.+..... ..+++..|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 45788899999999999999988888999998764321 24678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+|++|||.++......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 80 FMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 999999999886432 3588999999999999999999999 99999999999999999999999999998654322
Q ss_pred Cc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCCCcc
Q 001494 956 SN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSHN 1032 (1067)
Q Consensus 956 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1032 (1067)
.. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+... ....+..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--------~~~~~i~~~~~~~~~~~- 225 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--------EVVEMISRGFRLYRPKL- 225 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCCCCCCCCC-
Confidence 21 122345668999999988889999999999999999999 89998643321 111112111 1111211
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...++.+++.+||+.+|++||++.++++.|.
T Consensus 226 ---~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 226 ---ASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ---CCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1235899999999999999999999999873
No 89
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1e-36 Score=341.76 Aligned_cols=244 Identities=24% Similarity=0.316 Sum_probs=197.6
Q ss_pred CccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+.||+|+||.||+|+.. +++.||+|++.............+..|+++++.+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999765 6789999998754222223345677888888877 799999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 81 GDLMFHIQRS---GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 9999888543 3589999999999999999999999 999999999999999999999999999976433333334
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
..+|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+... ...
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--------~~~~~i~~~~~~~~~~~----~~~ 222 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--------ELFQSILEDEVRYPRWL----SKE 222 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--------HHHHHHHcCCCCCCCcC----CHH
Confidence 567899999999999999999999999999999999999998644321 11122222233333222 234
Q ss_pred HHHHHHhccCCCCCCCCCH-----HHHHH
Q 001494 1040 FVEVAISCLDESPESRPTM-----QKVSQ 1063 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~-----~evl~ 1063 (1067)
+.+++.+||+.||.+||++ .++++
T Consensus 223 ~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 223 AKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 8899999999999999999 77764
No 90
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.2e-36 Score=336.81 Aligned_cols=261 Identities=25% Similarity=0.342 Sum_probs=201.3
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.+.||+|+||.||+|+.. +++.||+|++....... ...+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE-EVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccc-cchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 36889999999999999999765 68899999987543222 23466789999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++++.+..+... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 80 EYVEKNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred ecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 99999877765532 24588999999999999999999999 9999999999999999999999999999876433
Q ss_pred CC-ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh-------hhhhh-------
Q 001494 955 SS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL-------NIALD------- 1019 (1067)
Q Consensus 955 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~-------~~~~~------- 1019 (1067)
.. ......|++.|+|||++.+..++.++||||+||++|||++|+.||............. .....
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 22 2334578999999999988889999999999999999999999987543211100000 00000
Q ss_pred --hccCCCCCCCCc----chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1020 --EILDPRLPIPSH----NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1020 --~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+....+.. ........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000000 00112345899999999999999999999886
No 91
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=347.91 Aligned_cols=250 Identities=26% Similarity=0.463 Sum_probs=207.1
Q ss_pred CCCccCccccCCceeEEEEE-ECCCc----EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCcee
Q 001494 797 DFDDEHCIGKGGQGSVYKVE-LASGE----IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~-~~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 871 (1067)
+.+..++||+|+||+||+|. ...|+ +||+|++......+ ...++++|+.+|.+++|||+++++|+|.... +.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~--~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPK--ASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCch--hhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 34567899999999999974 44454 58999987654333 3578999999999999999999999998766 88
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
||++||+.|.|.++++.. ++.+--...+.|..|||+||.|||++ ++|||||.++|||+....++||+|||+|+.+
T Consensus 774 lvtq~mP~G~LlDyvr~h--r~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll 848 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREH--RDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLL 848 (1177)
T ss_pred HHHHhcccchHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhcc
Confidence 999999999999999753 44577788999999999999999999 9999999999999999999999999999998
Q ss_pred CCCCCccccccc--cccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCC
Q 001494 952 KPDSSNWTELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPI 1028 (1067)
Q Consensus 952 ~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1067)
.++...+....| .+.|||-|.+....|+.++|||||||.+||++| |..||+..+..+..... -...++..
T Consensus 849 ~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll-------e~geRLsq 921 (1177)
T KOG1025|consen 849 APDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL-------EKGERLSQ 921 (1177)
T ss_pred CcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH-------hccccCCC
Confidence 877766655444 568999999999999999999999999999998 99999876643211111 01233444
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
|+....+ ++-++.+||..|++.||+++++.+++
T Consensus 922 PpiCtiD----Vy~~mvkCwmid~~~rp~fkel~~~f 954 (1177)
T KOG1025|consen 922 PPICTID----VYMVMVKCWMIDADSRPTFKELAEEF 954 (1177)
T ss_pred CCCccHH----HHHHHHHHhccCcccCccHHHHHHHH
Confidence 5544444 88999999999999999999998876
No 92
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.1e-37 Score=351.84 Aligned_cols=252 Identities=24% Similarity=0.353 Sum_probs=204.8
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.+.||+|+||+||+|+.. +++.||+|++...........+.+..|+++++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36889999999999999999765 78999999987543222234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999998654 4588999999999999999999998 9999999999999999999999999999876543
Q ss_pred C-----------------------------CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 001494 955 S-----------------------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFIS 1005 (1067)
Q Consensus 955 ~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~ 1005 (1067)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 3 12234578999999999999999999999999999999999999986443
Q ss_pred cccccchhhhhhhhhccC--CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 001494 1006 LISSSSLNLNIALDEILD--PRLPIPSHNVQEKLISFVEVAISCLDESPESRPT-MQKVSQL 1064 (1067)
Q Consensus 1006 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-~~evl~~ 1064 (1067)
.. .....+.. .....+... ....++.+++.+|+. ||.+||+ +.|+++.
T Consensus 235 ~~--------~~~~~i~~~~~~~~~p~~~--~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 LQ--------ETYNKIINWKESLRFPPDP--PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HH--------HHHHHHhccCCcccCCCCC--CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 21 11111111 111222111 123358899999997 9999999 9999863
No 93
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4e-36 Score=331.93 Aligned_cols=254 Identities=27% Similarity=0.459 Sum_probs=204.0
Q ss_pred cCCCccCccccCCceeEEEEEECC------CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELAS------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
.+|+..+.||+|+||.||+|.... ...||+|.+.... .....+++.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 468889999999999999997542 2579999987432 33345678999999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccCc-------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC
Q 001494 870 SFIVYEYLEMGSLAMILSNDAA-------------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF 936 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~ 936 (1067)
.+++|||+++++|.+++..... ...+++.++..++.|++.|++|||++ +++||||||+||+++.
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence 9999999999999999864321 14578899999999999999999999 9999999999999999
Q ss_pred CCCeEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchh
Q 001494 937 KNEARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLN 1013 (1067)
Q Consensus 937 ~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~ 1013 (1067)
++.+||+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~------ 233 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ------ 233 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH------
Confidence 99999999999986543321 1233456788999999988889999999999999999998 99998643321
Q ss_pred hhhhhhhccCCCC-CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1014 LNIALDEILDPRL-PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1014 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+..... ..+. ..+.++.+++.+||+.||.+||+++||++.|+
T Consensus 234 --~~~~~i~~~~~~~~~~----~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 234 --EVIEMIRSRQLLPCPE----DCPARVYALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred --HHHHHHHcCCcCCCcc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHh
Confidence 11111111111 1122 23345899999999999999999999999885
No 94
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.1e-36 Score=348.14 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=195.4
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||+||+|+. .+++.||+|++......+......+..|+.++.+++||+|+++++++.+....|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4688999999999999999965 468999999986532222333456888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKK---DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 999999999998643 3589999999999999999999999 9999999999999999999999999999754321
Q ss_pred CC-----------------------------------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCC
Q 001494 955 SS-----------------------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 999 (1067)
Q Consensus 955 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~ 999 (1067)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 10 0123579999999999999899999999999999999999999
Q ss_pred CCCccccccccchhhhhhhhhccC--CCCCCCCcchHHHHHHHHHHHHhccC--CCCCCCCCHHHHHH
Q 001494 1000 PGDFISLISSSSLNLNIALDEILD--PRLPIPSHNVQEKLISFVEVAISCLD--ESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1000 p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~Rpt~~evl~ 1063 (1067)
||....... ....+.. .....+... ....++.+++.+++. .++..||++.|+++
T Consensus 235 Pf~~~~~~~--------~~~~i~~~~~~~~~p~~~--~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 235 PFCSETPQE--------TYKKVMNWKETLIFPPEV--PISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCCCCCHHH--------HHHHHHcCcCcccCCCcC--CCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 986433211 1111111 111122111 011236667766443 34446789999876
No 95
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4e-37 Score=345.35 Aligned_cols=240 Identities=24% Similarity=0.327 Sum_probs=196.1
Q ss_pred CccccCCceeEEEEEE----CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEec
Q 001494 802 HCIGKGGQGSVYKVEL----ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYL 877 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 877 (1067)
+.||+|+||.||+++. .+|+.||+|++...... ......+..|++++++++||||+++++++.+++..|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999864 46889999998753222 122345678999999999999999999999999999999999
Q ss_pred cCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCc
Q 001494 878 EMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSN 957 (1067)
Q Consensus 878 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 957 (1067)
++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 81 RGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 999999988543 3589999999999999999999999 9999999999999999999999999999876544334
Q ss_pred cccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHH
Q 001494 958 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKL 1037 (1067)
Q Consensus 958 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1067)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+.......+....
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--------~~~~~~i~~~~~~~p~~~~---- 222 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--------KETMTMILKAKLGMPQFLS---- 222 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH--------HHHHHHHHcCCCCCCCCCC----
Confidence 4456789999999999888899999999999999999999999864332 1122223233333333222
Q ss_pred HHHHHHHHhccCCCCCCCCCHHH
Q 001494 1038 ISFVEVAISCLDESPESRPTMQK 1060 (1067)
Q Consensus 1038 ~~l~~li~~cl~~dP~~Rpt~~e 1060 (1067)
..+.+++.+||+.||++||++.+
T Consensus 223 ~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 223 PEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHHHhhcCHhHcCCCCC
Confidence 34789999999999999999655
No 96
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=7.9e-37 Score=343.63 Aligned_cols=240 Identities=24% Similarity=0.315 Sum_probs=192.4
Q ss_pred CccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHH-HHhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVK-ALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+.||+|+||+||+|+.. +|+.||+|++...........+++..|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999764 78999999986432222222344555554 56889999999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|..++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 9999888543 3588899999999999999999999 999999999999999999999999999976443334445
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+... ..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~~~~~~----~~~ 222 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT--------AEMYDNILNKPLRLKPNI----SVS 222 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH--------HHHHHHHHcCCCCCCCCC----CHH
Confidence 56799999999999998999999999999999999999999864322 112222333333333222 234
Q ss_pred HHHHHHhccCCCCCCCCCHH
Q 001494 1040 FVEVAISCLDESPESRPTMQ 1059 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~ 1059 (1067)
+.+++.+|++.||++||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCC
Confidence 88999999999999999984
No 97
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.6e-36 Score=339.72 Aligned_cols=243 Identities=24% Similarity=0.316 Sum_probs=193.1
Q ss_pred CccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
++||+|+||.||+|+.. +|+.||+|++...........+.+..|..++... +||+|+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999764 6889999998753221112234566777777654 899999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|..++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 9999888543 3578899999999999999999999 999999999999999999999999999975433333445
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+... ..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~~~~~~~~~~~----~~~ 222 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIRVDTPHYPRWI----TKE 222 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCCCC----CHH
Confidence 577999999999999989999999999999999999999998643321 11112222222222222 234
Q ss_pred HHHHHHhccCCCCCCCCCHH-HHH
Q 001494 1040 FVEVAISCLDESPESRPTMQ-KVS 1062 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~-evl 1062 (1067)
+.+++.+||+.||++||++. ++.
T Consensus 223 ~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 223 SKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHH
Confidence 78999999999999999984 554
No 98
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-37 Score=324.82 Aligned_cols=249 Identities=24% Similarity=0.396 Sum_probs=216.2
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.-|+..+.||+|.|++|-.|++ -+|+.||||++.+..-++.. ...+.+|++.|+.++|||||++|.+.......|+|.
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~s-t~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLS-TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhh-hhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 4577888999999999998864 58999999999876555433 466889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeC-CCCCeEEeccccceecCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLD-FKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~-~~~~~kl~DfG~a~~~~~ 953 (1067)
|.-++|+|++|+-+. .+.+.+..+.+++.||+.|+.|+|.. .+||||+||+||.+- .-|-||++|||++..+.+
T Consensus 97 ELGD~GDl~DyImKH--e~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKH--EEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EecCCchHHHHHHhh--hccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 999999999999433 34588999999999999999999999 999999999998764 558899999999998875
Q ss_pred CCCccccccccccccCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
. ...+..+|+..|-|||.+.+..|+ +++||||+|||+|-+.+|+.||+. .+..+....++|-.+..|.+.
T Consensus 172 G-~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqe--------ANDSETLTmImDCKYtvPshv 242 (864)
T KOG4717|consen 172 G-KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQE--------ANDSETLTMIMDCKYTVPSHV 242 (864)
T ss_pred c-chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccc--------ccchhhhhhhhcccccCchhh
Confidence 4 566788999999999999999885 689999999999999999999873 344566677888888887665
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..+ ++++|..|+..||++|.+.+|++.
T Consensus 243 S~e----CrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 243 SKE----CRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hHH----HHHHHHHHHhcCchhhccHHHHhc
Confidence 544 899999999999999999999874
No 99
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.9e-36 Score=338.73 Aligned_cols=243 Identities=23% Similarity=0.327 Sum_probs=192.5
Q ss_pred CccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhc-CCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTE-IRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+.||+|+||.||+|+.. +++.||+|++...........+.+..|..+++. .+||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999765 578999999875322111223456677777765 4899999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 81 GDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 9999988542 3478899999999999999999999 999999999999999999999999999976433333344
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+... ..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~~~~~~~~----~~~ 222 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--------ELFQSIRMDNPCYPRWL----TRE 222 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCccC----CHH
Confidence 567899999999999888999999999999999999999998643321 11111111112222221 234
Q ss_pred HHHHHHhccCCCCCCCCCHH-HHH
Q 001494 1040 FVEVAISCLDESPESRPTMQ-KVS 1062 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~-evl 1062 (1067)
+.+++.+||+.||++||++. ++.
T Consensus 223 ~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 223 AKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHHHhccCHhhcCCChHHHH
Confidence 78999999999999999997 554
No 100
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.3e-36 Score=349.75 Aligned_cols=251 Identities=22% Similarity=0.296 Sum_probs=196.1
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.|+..+.||+|+||+||+|+. .+++.||+|++...........+.+..|+++++.++||||+++++++.+.+..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999964 5788999999865332233345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRM---EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 99999999998543 3478889999999999999999999 99999999999999999999999999976431100
Q ss_pred -----------------------------------------------CccccccccccccCccccccCCCCccchhHHHH
Q 001494 956 -----------------------------------------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFG 988 (1067)
Q Consensus 956 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG 988 (1067)
......+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 001235799999999999988899999999999
Q ss_pred HHHHHHHhCCCCCCccccccccchhhhhhhhhccC--CCCCCCCcchHHHHHHHHHHHHh--ccCCCCCCCCCHHHHHH
Q 001494 989 VLALEVIKGKHPGDFISLISSSSLNLNIALDEILD--PRLPIPSHNVQEKLISFVEVAIS--CLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 989 vil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~Rpt~~evl~ 1063 (1067)
|++|||++|+.||....... ....+.. .....+.. .....++.+++.+ |+..+|..||++.|+++
T Consensus 236 ~il~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~~~~--~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTE--------TQLKVINWENTLHIPPQ--VKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHH--------HHHHHHccccccCCCCC--CCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 99999999999986433211 1111111 11111111 0112347788877 55666777999999975
No 101
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.2e-36 Score=343.47 Aligned_cols=257 Identities=25% Similarity=0.396 Sum_probs=201.7
Q ss_pred hcCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeC
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHA 867 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~ 867 (1067)
.++|.++++||+|+||.||+|+.. .+..||||++.... .....+.+.+|++++++++ |||||++++++.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 357889999999999999998642 23479999986542 2233567899999999996 99999999999999
Q ss_pred CceeEEEEeccCCCHHHHhcccCc--------------------------------------------------------
Q 001494 868 QHSFIVYEYLEMGSLAMILSNDAA-------------------------------------------------------- 891 (1067)
Q Consensus 868 ~~~~lv~E~~~~g~L~~~l~~~~~-------------------------------------------------------- 891 (1067)
+..|+||||+++|+|.+++.....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 999999999999999988854210
Q ss_pred -------------------------------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceee
Q 001494 892 -------------------------------------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLL 934 (1067)
Q Consensus 892 -------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill 934 (1067)
...+++.++.+++.|+++|++|||+. +|+||||||+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEE
Confidence 12478888899999999999999999 99999999999999
Q ss_pred CCCCCeEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccc
Q 001494 935 DFKNEARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSS 1011 (1067)
Q Consensus 935 ~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~ 1011 (1067)
+.++.+||+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-- 348 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-- 348 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--
Confidence 9999999999999987643322 1123456788999999988889999999999999999997 9999764321100
Q ss_pred hhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1012 LNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1012 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.......- .....+. .....+.+++.+||+.+|++|||+.+|.++|+
T Consensus 349 --~~~~~~~~--~~~~~~~----~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~ 395 (400)
T cd05105 349 --FYNKIKSG--YRMAKPD----HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVE 395 (400)
T ss_pred --HHHHHhcC--CCCCCCc----cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHH
Confidence 00011111 1111122 22345899999999999999999999999875
No 102
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.5e-36 Score=328.21 Aligned_cols=254 Identities=27% Similarity=0.477 Sum_probs=208.5
Q ss_pred HhcCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
...+|+..++||.|+||.||+|...+++.+|+|.+.... .....++..|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD---LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc---hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 346788999999999999999998889999999987532 22346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++++|.+++.... ...+++.++.+++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 81 TELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred EeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 99999999999996533 34589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCCCc
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSH 1031 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1031 (1067)
.........++..|+|||.+.+..++.++||||||+++|+|++ |+.||...... .....+... ....+..
T Consensus 157 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~ 228 (261)
T cd05148 157 DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--------EVYDQITAGYRMPCPAK 228 (261)
T ss_pred ccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHHhCCcCCCCCC
Confidence 4333334456778999999988889999999999999999998 89998643321 111111111 1112222
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...++.+++.+||+.||++|||+.++++.|+
T Consensus 229 ----~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 229 ----CPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred ----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 2235889999999999999999999999986
No 103
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.2e-36 Score=330.52 Aligned_cols=255 Identities=26% Similarity=0.452 Sum_probs=204.9
Q ss_pred cCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
.+|.+.+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+++++.++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 46888899999999999999753 347899999875432 2245789999999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccC-----------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC
Q 001494 870 SFIVYEYLEMGSLAMILSNDA-----------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN 938 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~ 938 (1067)
.++||||+++++|.+++.... ....+++.++..++.|++.|++|||++ +++||||||+||+++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCC
Confidence 999999999999999996432 234578999999999999999999999 999999999999999999
Q ss_pred CeEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhh
Q 001494 939 EARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLN 1015 (1067)
Q Consensus 939 ~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~ 1015 (1067)
.+||+|||+++....... ......+++.|+|||++.+..++.++||||+||++|||++ |+.||......
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-------- 231 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-------- 231 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------
Confidence 999999999976543221 1123345788999999999999999999999999999998 99997543321
Q ss_pred hhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1016 IALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+.......+.. .....+.+++.+||+.||++||++.||++.|+
T Consensus 232 ~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 EVIECITQGRLLQRPR---TCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1112222222221111 12235889999999999999999999999885
No 104
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.1e-36 Score=348.06 Aligned_cols=252 Identities=23% Similarity=0.320 Sum_probs=200.6
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
.++|+..++||+|+||.||+|+. .+++.||+|++...........+.+.+|+.+++.++||||+++++++.++...|+|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 45789999999999999999965 47889999998643222222345577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 122 ~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 122 MEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999998542 377888899999999999999999 999999999999999999999999999987653
Q ss_pred CCC-ccccccccccccCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC--CC
Q 001494 954 DSS-NWTELAGTYGYVAPELAYTM----KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP--RL 1026 (1067)
Q Consensus 954 ~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 1026 (1067)
... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .....+... .+
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~~~~~~ 266 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMDHKNSL 266 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH--------HHHHHHHcCCCcC
Confidence 322 22346799999999988653 3788999999999999999999998643321 111222221 12
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPES--RPTMQKVSQ 1063 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~evl~ 1063 (1067)
..+.. .....++.+++.+|++.+|++ ||++.|+++
T Consensus 267 ~~~~~--~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 267 TFPDD--IEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCCc--CCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 22211 112345889999999999998 999999975
No 105
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=8.4e-37 Score=349.91 Aligned_cols=251 Identities=25% Similarity=0.332 Sum_probs=199.2
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||+||+|+.. +++.||||++...........+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36889999999999999999764 68999999986432222233456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKK---DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 999999999998543 3589999999999999999999999 9999999999999999999999999998764321
Q ss_pred CC--------------------------------------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh
Q 001494 955 SS--------------------------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK 996 (1067)
Q Consensus 955 ~~--------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt 996 (1067)
.. .....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 10 0012468999999999998899999999999999999999
Q ss_pred CCCCCCccccccccchhhhhhhhhccC--CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCC---HHHHHH
Q 001494 997 GKHPGDFISLISSSSLNLNIALDEILD--PRLPIPSHNVQEKLISFVEVAISCLDESPESRPT---MQKVSQ 1063 (1067)
Q Consensus 997 g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt---~~evl~ 1063 (1067)
|+.||....... ....+.. .....+... ....++.+++.+|+. +|.+|++ +.|+++
T Consensus 235 G~~Pf~~~~~~~--------~~~~i~~~~~~~~~~~~~--~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 235 GYPPFCSDNPQE--------TYRKIINWKETLQFPDEV--PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCCHHH--------HHHHHHcCCCccCCCCCC--CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999987443211 1111111 111112111 112347889999996 8999998 888765
No 106
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=5.7e-36 Score=325.16 Aligned_cols=251 Identities=25% Similarity=0.424 Sum_probs=202.2
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
++|+..+.||+|+||+||.|+...+..||+|.+..... ..+++.+|+.++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 45788899999999999999887777899999864321 24678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++|+|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 80 YMSNGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 999999999986432 2589999999999999999999999 99999999999999999999999999998664432
Q ss_pred Cc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 956 SN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 956 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.. .....++..|+|||...+..++.++|||||||++|||++ |+.||...... .....+...........
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~- 225 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--------ETVEKVSQGLRLYRPHL- 225 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHhcCCCCCCCCC-
Confidence 21 112335678999999988889999999999999999998 99997643321 11111111111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....+.+++.+||+.+|.+||++.++++.++
T Consensus 226 --~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 226 --ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 2245899999999999999999999999875
No 107
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.1e-36 Score=331.15 Aligned_cols=248 Identities=35% Similarity=0.566 Sum_probs=192.4
Q ss_pred ccCccccCCceeEEEEEEC-----CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 800 DEHCIGKGGQGSVYKVELA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 800 ~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
..+.||.|+||.||+|++. .+..|+||++... ......+++.+|++.+++++||||++++|++...+..++||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccccccccccccccccccccccccc
Confidence 4578999999999999776 3578999999643 23334688999999999999999999999999888899999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ....+++.++.+|+.||++||+|||++ +++|+||+++||+++.++.+||+|||+++.....
T Consensus 81 e~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp E--TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred ccccccccccccccc-ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 999999999999654 234589999999999999999999999 9999999999999999999999999999876322
Q ss_pred CCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCC-CCCCC
Q 001494 955 SSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPR-LPIPS 1030 (1067)
Q Consensus 955 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1030 (1067)
... .........|+|||.+.+..++.++||||||+++||+++ |+.||...... .....+.+.. ...+.
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~--------~~~~~~~~~~~~~~~~ 228 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE--------EIIEKLKQGQRLPIPD 228 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH--------HHHHHHHTTEETTSBT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------cccccccccccceecc
Confidence 111 123446778999999998889999999999999999999 68887644221 1111111111 11122
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1031 HNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1031 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
.. ...+.+++.+||+.+|++|||+.++++.|
T Consensus 229 ~~----~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 229 NC----PKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TS----BHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ch----hHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 22 23488999999999999999999999876
No 108
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.9e-36 Score=329.37 Aligned_cols=256 Identities=22% Similarity=0.354 Sum_probs=202.0
Q ss_pred HhcCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA 867 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 867 (1067)
..++|+..+.||+|+||.||+|... +++.||+|++... .......++.+|+.+++.++||||+++++++.+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~--~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 3567999999999999999998643 3567999998643 2223356788999999999999999999999999
Q ss_pred CceeEEEEeccCCCHHHHhcccCc-------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCe
Q 001494 868 QHSFIVYEYLEMGSLAMILSNDAA-------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEA 940 (1067)
Q Consensus 868 ~~~~lv~E~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~ 940 (1067)
...++||||+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCE
Confidence 999999999999999999864321 23467888999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCcc--ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhh
Q 001494 941 RVSDFGIAKFLKPDSSNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIA 1017 (1067)
Q Consensus 941 kl~DfG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 1017 (1067)
+++|||+++......... ....+++.|+|||++.+..++.++|||||||++|||++ |..||...... ..
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--------~~ 230 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--------QV 230 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HH
Confidence 999999997654322211 12345678999999988889999999999999999999 68887643221 11
Q ss_pred hhhccCCCC-CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1018 LDEILDPRL-PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1018 ~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...+..... ..+.. ....+.+++.+||+.+|++|||+.|+++.|+
T Consensus 231 ~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 231 LRFVMEGGLLDKPDN----CPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHcCCcCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 111111111 11111 2235889999999999999999999999875
No 109
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-38 Score=336.87 Aligned_cols=247 Identities=28% Similarity=0.464 Sum_probs=201.7
Q ss_pred CCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.|...+.||.|+||.||.|+ ..+.+.||||++.-.........+++..|+.++.+++|||+|.+-|+|-.+...|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 35667889999999999996 45788999999987665666667899999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
||- |+-.|++. ...+++.+..+..|+.+++.||+|||++ +.||||||+.|||+++.|.||++|||.|....+.
T Consensus 107 YCl-GSAsDlle--VhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 107 YCL-GSASDLLE--VHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHh-ccHHHHHH--HHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 996 46666663 2345688889999999999999999999 9999999999999999999999999999766544
Q ss_pred CccccccccccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 956 SNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
..++|||.|||||++. .+.|+-|+||||+|++..|+.-+++|+-.+..+... ..+.+--.| ..+...
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL-----YHIAQNesP--tLqs~e 249 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-----YHIAQNESP--TLQSNE 249 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH-----HHHHhcCCC--CCCCch
Confidence 4689999999999875 467999999999999999999999995433332111 111111112 222333
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+.+ .++.|+..|+++-|++|||..+++.
T Consensus 250 WS~---~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 250 WSD---YFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred hHH---HHHHHHHHHHhhCcccCCcHHHHhh
Confidence 444 4888999999999999999999875
No 110
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.6e-36 Score=331.29 Aligned_cols=254 Identities=23% Similarity=0.284 Sum_probs=201.4
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.|+..++||+|+||.||++.. .+++.||+|++.............+.+|+.++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 377889999999999999865 4789999999864322222233557789999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG- 155 (285)
T ss_pred ccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-
Confidence 999999998875432 34589999999999999999999999 9999999999999999999999999999875432
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||....... ........+.......+. .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~----~ 227 (285)
T cd05605 156 ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV----KREEVERRVKEDQEEYSE----K 227 (285)
T ss_pred CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh----HHHHHHHHhhhcccccCc----c
Confidence 22234578999999999988889999999999999999999999987432211 001111111111111111 2
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1036 KLISFVEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
....+.+++.+||+.||++|| ++.++++
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 228 FSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 334588999999999999999 8888865
No 111
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=5.2e-36 Score=328.04 Aligned_cols=260 Identities=22% Similarity=0.326 Sum_probs=208.7
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|+..+.||+|+||.||+|+. .+++.||||.+......+....+++.+|+.+++.++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4678889999999999999974 589999999886543334444568899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 875 EYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
||+++++|.+++... .....+++.++..++.|+++|++|||++ +++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999988642 2234689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.........++..|+|||++.+..++.++||||||+++|||++|..||...... .......+...... +...
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~--~~~~ 230 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQCDYP--PLPS 230 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch------HHHHhhhhhcCCCC--CCCc
Confidence 433334457889999999998888999999999999999999999997532210 01111111111111 1111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....++.+++.+||+.+|++|||+.+|++.++
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 231 DHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 123346899999999999999999999988774
No 112
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.8e-36 Score=359.77 Aligned_cols=258 Identities=27% Similarity=0.403 Sum_probs=202.2
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.++||+|+||.||+|... +|+.||+|++...........+++.+|++++++++||||+++++++.+.+..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47899999999999999999754 68999999997654444445677999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccC--------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 875 EYLEMGSLAMILSNDA--------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
||++||+|.+++.... .....++..+++++.||++||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999885321 123456778899999999999999999 99999999999999999999999999
Q ss_pred cceecCCCC------------------CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc
Q 001494 947 IAKFLKPDS------------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLIS 1008 (1067)
Q Consensus 947 ~a~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~ 1008 (1067)
+++...... ......+||+.|||||++.+..++.++||||+||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 998662110 01123468999999999999999999999999999999999999986422110
Q ss_pred ccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHh
Q 001494 1009 SSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRP-TMQKVSQLL 1065 (1067)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~evl~~L 1065 (1067)
. ........+....+ ..+.+..+.+++.+|++.||++|| +++++.+.|
T Consensus 239 i------~~~~~i~~P~~~~p---~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~L 287 (932)
T PRK13184 239 I------SYRDVILSPIEVAP---YREIPPFLSQIAMKALAVDPAERYSSVQELKQDL 287 (932)
T ss_pred h------hhhhhccChhhccc---cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0 00011111111111 112234588999999999999997 556666554
No 113
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.8e-36 Score=340.86 Aligned_cols=253 Identities=21% Similarity=0.294 Sum_probs=198.5
Q ss_pred CCCccCccccCCceeEEEEEE----CCCcEEEEEEeCCCCC-CChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCce
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL----ASGEIIAVKKFHSPLP-GEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 870 (1067)
+|++.++||+|+||.||+++. .+++.||+|++..... ......+.+..|+.+++.+ +||+|+++++++.+++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999865 3688999999864321 1222345678899999999 599999999999999999
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR---DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 9999999999999988543 3488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-ccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCC
Q 001494 951 LKPDSS-NWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPI 1028 (1067)
Q Consensus 951 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1067)
+..... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||........ .......+.......
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~ 230 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT----QSEVSRRILKCDPPF 230 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC----HHHHHHHHhcCCCCC
Confidence 543322 233467999999999987654 78899999999999999999999864322111 111111222222222
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
+... ...+.+++.+||+.||++|| +++++++
T Consensus 231 ~~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 231 PSFI----GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCC----CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 2222 23478999999999999999 6667764
No 114
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=8.3e-36 Score=325.17 Aligned_cols=252 Identities=25% Similarity=0.401 Sum_probs=203.8
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
++|+..++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 81 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence 5688999999999999999998888899999976421 124678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||+++......
T Consensus 82 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 82 YMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred cCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 999999999986432 34578899999999999999999999 99999999999999999999999999998765322
Q ss_pred Cc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 956 SN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 956 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.. .....++..|+|||++.+..++.++|||||||++|||+| |+.||....... ......... ..+...
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~~~~~~--~~~~~~--- 227 (261)
T cd05072 158 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-----VMSALQRGY--RMPRME--- 227 (261)
T ss_pred eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-----HHHHHHcCC--CCCCCC---
Confidence 11 122345678999999988889999999999999999998 999986432111 111111111 111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....++.+++.+|++.+|++||++.++.+.|+
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 228 -NCPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred -CCCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 12235889999999999999999999999986
No 115
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.4e-36 Score=341.88 Aligned_cols=241 Identities=24% Similarity=0.320 Sum_probs=192.8
Q ss_pred CccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHH-HHhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVK-ALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+.||+|+||+||+|+. .+|+.||+|++...........+++..|.. +++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999965 578999999986532222233445555654 56789999999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|..++.. ...+++.++..++.||+.|++|||+. ||+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 999988854 33588999999999999999999999 999999999999999999999999999976443334445
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......++.. ..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--------~~~~~~~~~~~~~~~~~~----~~~ 222 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV--------AEMYDNILHKPLVLRPGA----SLT 222 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH--------HHHHHHHHcCCccCCCCC----CHH
Confidence 56799999999999999999999999999999999999999864332 112222222233222222 234
Q ss_pred HHHHHHhccCCCCCCCCCHHH
Q 001494 1040 FVEVAISCLDESPESRPTMQK 1060 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~e 1060 (1067)
+.+++.+|++.+|.+||++.+
T Consensus 223 ~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 223 AWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHHHhccCHHhcCCCCC
Confidence 789999999999999998863
No 116
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.2e-36 Score=338.03 Aligned_cols=247 Identities=24% Similarity=0.335 Sum_probs=196.2
Q ss_pred CccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+.||+|+||.||+|+. .+++.||+|++...........+.+..|+.++.++ +||+|+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999975 46789999999754333333456688899998888 699999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|..++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 9999888543 3589999999999999999999999 999999999999999999999999999976443333445
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
..+||+.|+|||++.+..++.++|||||||++|||++|+.||+......... ........+.......|.... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~----~~ 229 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN-TEDYLFQVILEKPIRIPRFLS----VK 229 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc-cHHHHHHHHHhCCCCCCCCCC----HH
Confidence 5679999999999999999999999999999999999999996432211110 111112222223333333322 24
Q ss_pred HHHHHHhccCCCCCCCCCHH
Q 001494 1040 FVEVAISCLDESPESRPTMQ 1059 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~ 1059 (1067)
+.+++.+||+.||++|+++.
T Consensus 230 ~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 230 ASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred HHHHHHHHhccCHHHcCCCC
Confidence 78999999999999999853
No 117
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.2e-36 Score=338.29 Aligned_cols=244 Identities=22% Similarity=0.310 Sum_probs=196.7
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCceeEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 874 (1067)
+|+..+.||+|+||+||+|+. .+|+.||+|++...........+.+..|+.+++.+. |++|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 467789999999999999965 478999999987532222223456778888888885 678888999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV---GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 999999999988543 3589999999999999999999999 9999999999999999999999999999765433
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~~~~~p~~~~- 225 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--------DELFQSIMEHNVSYPKSLS- 225 (323)
T ss_pred CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCccCC-
Confidence 3333456789999999999988899999999999999999999999874332 1122223333333333222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTM 1058 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~ 1058 (1067)
.++.+++.+|++.+|.+|+++
T Consensus 226 ---~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 226 ---KEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---HHHHHHHHHHcccCHhhCCCC
Confidence 347899999999999999985
No 118
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.7e-36 Score=341.15 Aligned_cols=241 Identities=23% Similarity=0.285 Sum_probs=190.8
Q ss_pred CccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHH-HHhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVK-ALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+.||+|+||+||+|+.. +++.||+|++.............+..|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999765 67889999986432211222334444444 56888999999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|.+++... ..+++..+..++.|+++||+|||++ ||+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 81 GELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 9999988543 3477888889999999999999999 999999999999999999999999999986544334445
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......++.. ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~~~----~~~ 222 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILNKPLQLKPNI----TNS 222 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--------HHHHHHHhCCcCCCCCC----CHH
Confidence 567999999999999989999999999999999999999998643321 11122222222222222 234
Q ss_pred HHHHHHhccCCCCCCCCCHHH
Q 001494 1040 FVEVAISCLDESPESRPTMQK 1060 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~e 1060 (1067)
+.+++.+|++.||.+||++.+
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCC
Confidence 889999999999999998874
No 119
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-37 Score=318.17 Aligned_cols=256 Identities=24% Similarity=0.315 Sum_probs=193.3
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-----c
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ-----H 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~ 869 (1067)
-.|...+++|.|+||.||+|... +++.||||++....... -+|+++|+.++|||||++.-+|.... .
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 35777899999999999999654 57999999997543321 26999999999999999998885432 3
Q ss_pred eeEEEEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC-CCeEEecccc
Q 001494 870 SFIVYEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK-NEARVSDFGI 947 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~-~~~kl~DfG~ 947 (1067)
..+|||||+. +|.+++++. ..+..++.-.+.-++.||.+|++|||+. +|+||||||+|+|+|.+ |.+||||||.
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCc
Confidence 4699999986 888888642 2234577778888999999999999998 99999999999999977 8999999999
Q ss_pred ceecCCCCCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccc-------chhhhhhhh
Q 001494 948 AKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSS-------SLNLNIALD 1019 (1067)
Q Consensus 948 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~-------~~~~~~~~~ 1019 (1067)
|+.+.+.... .....|.-|+|||.+.+. .|+.+.||||.||++.||+-|++-|.+.+..... +....+.+.
T Consensus 173 AK~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 173 AKVLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred ceeeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence 9988766554 445678889999988775 5999999999999999999999988764432111 001111111
Q ss_pred -------hccCCCCCCCC--c-chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1020 -------EILDPRLPIPS--H-NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1020 -------~~~~~~~~~~~--~-~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+...+.+.... . .......+..+++.++++.+|.+|.++.|++.
T Consensus 252 ~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred hcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11111111110 0 11122345899999999999999999999875
No 120
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.6e-36 Score=346.04 Aligned_cols=253 Identities=23% Similarity=0.319 Sum_probs=199.4
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
.++|+..+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 467999999999999999999765 6889999998642222222345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+....
T Consensus 122 ~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 122 MEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 9999999999998532 378889999999999999999999 999999999999999999999999999987653
Q ss_pred CCC-ccccccccccccCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC--CC
Q 001494 954 DSS-NWTELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP--RL 1026 (1067)
Q Consensus 954 ~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 1026 (1067)
... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .....+... .+
T Consensus 195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--------~~~~~i~~~~~~~ 266 (370)
T cd05621 195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--------GTYSKIMDHKNSL 266 (370)
T ss_pred CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCccc
Confidence 322 223567999999999987543 788999999999999999999998643321 112222221 12
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPES--RPTMQKVSQL 1064 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~evl~~ 1064 (1067)
..+.. ......+.+++..|++.+|.+ ||++.|+++.
T Consensus 267 ~~p~~--~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 267 NFPED--VEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCCCc--ccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 22211 122334788999999865544 8899998763
No 121
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.7e-36 Score=343.23 Aligned_cols=252 Identities=20% Similarity=0.278 Sum_probs=194.6
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
..|++.+.||+|+||.||+|.. .+++.||+|+.. .+.+.+|++++++++|||||++++++......++||
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 5799999999999999999864 578999999743 234678999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|++. +++..++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+.....
T Consensus 163 e~~~-~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 163 PRYK-TDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred ecCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 9996 6787777433 3478999999999999999999999 9999999999999999999999999999754322
Q ss_pred -CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc---chh-----------------
Q 001494 955 -SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSS---SLN----------------- 1013 (1067)
Q Consensus 955 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~---~~~----------------- 1013 (1067)
........||+.|+|||++.+..++.++||||+||++|||++|+.|+-........ ...
T Consensus 236 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 236 NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 22334567999999999999889999999999999999999999885322110000 000
Q ss_pred -hhhhhhhc---------cCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1014 -LNIALDEI---------LDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1014 -~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
........ ..+..........+...++.+++.+||+.||.+|||+.|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000 000000000111123456889999999999999999999985
No 122
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.3e-36 Score=352.13 Aligned_cols=249 Identities=20% Similarity=0.251 Sum_probs=201.2
Q ss_pred CCCccCccccCCceeEEEEEEC-C-CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-S-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.|...+.||+|+||.||+|... + ++.||+|.+... .......+.+|+.+++.++|||||++++++..++..|+||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 4888999999999999998543 4 678888876432 2333456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 875 EYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
||+++|+|.+++... ....++++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 999999999887532 2334688999999999999999999999 999999999999999999999999999987653
Q ss_pred CCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC-CCC
Q 001494 954 DSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP-IPS 1030 (1067)
Q Consensus 954 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1030 (1067)
... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... .+.
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--------~~~~~~~~~~~~~~~~~ 293 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--------REIMQQVLYGKYDPFPC 293 (478)
T ss_pred ccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCCc
Confidence 322 23345799999999999998999999999999999999999999864322 1112222222211 121
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1031 HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1031 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. ...++.+++.+||+.||++||++.++++
T Consensus 294 ~----~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 294 P----VSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred c----CCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 2 2234889999999999999999999875
No 123
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.4e-36 Score=341.65 Aligned_cols=258 Identities=26% Similarity=0.400 Sum_probs=194.2
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-----ce
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ-----HS 870 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 870 (1067)
+|++.++||+|+||.||+|.. .+++.||||++...... ......+.+|+++++.++||||+++++++.... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 478889999999999999965 47899999998743222 223456889999999999999999999885432 47
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
|+||||++ ++|.+++... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 80 YVVFELME-SDLHQVIKAN---DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEEecCC-CCHHHHHHhc---ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 99999996 6888887533 3589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC---ccccccccccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCccccccccc-------hhh----
Q 001494 951 LKPDSS---NWTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSS-------LNL---- 1014 (1067)
Q Consensus 951 ~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~-------~~~---- 1014 (1067)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... ...
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 532211 2244678999999998865 568999999999999999999999986533211000 000
Q ss_pred --------hhhhhhccCCCCCCC-CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1015 --------NIALDEILDPRLPIP-SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1015 --------~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
......+. ...+.+ ..........+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 233 SRVRNEKARRYLSSMR-KKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHhhhhhHHHHHHhhc-ccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000111 000000 0000111235789999999999999999999985
No 124
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.9e-35 Score=323.61 Aligned_cols=259 Identities=25% Similarity=0.367 Sum_probs=208.9
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||+|... +|+.||+|.++..........+.+.+|++++++++|++++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999765 89999999886433333334577899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 875 EYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
||+++++|..++... .....+++.++..++.++++|++|||+. +|+||||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999988543 2234588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCC-CCCCcc
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRL-PIPSHN 1032 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 1032 (1067)
.........+++.|+|||.+.+..++.++|||||||++|||++|+.||..... ........+..... +.+.
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~-- 230 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEKCDYPPLPA-- 230 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc------cHHHHHhhhhcCCCCCCCh--
Confidence 43333445688899999999888899999999999999999999999753221 00111111111111 1111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
......+.+++.+||+.+|++|||+.++++.++
T Consensus 231 -~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~ 263 (267)
T cd08224 231 -DHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263 (267)
T ss_pred -hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHH
Confidence 122345889999999999999999999999875
No 125
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.1e-36 Score=327.87 Aligned_cols=249 Identities=24% Similarity=0.294 Sum_probs=195.4
Q ss_pred cccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCH
Q 001494 804 IGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSL 882 (1067)
Q Consensus 804 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 882 (1067)
||+|+||.||+++. .+|+.||+|++...........+.+..|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999865 46899999998643222222334566799999999999999999999999999999999999999
Q ss_pred HHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcccccc
Q 001494 883 AMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTELA 962 (1067)
Q Consensus 883 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 962 (1067)
.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++...... .......
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05607 81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG-KTITQRA 155 (277)
T ss_pred HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-ceeeccC
Confidence 88875432 33478999999999999999999999 9999999999999999999999999999876532 2233457
Q ss_pred ccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHH
Q 001494 963 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVE 1042 (1067)
Q Consensus 963 gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1042 (1067)
|++.|+|||++.+..++.++||||+||++|||++|+.||....... ................+.. ....++.+
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 228 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV----AKEELKRRTLEDEVKFEHQ---NFTEESKD 228 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh----hHHHHHHHhhccccccccc---cCCHHHHH
Confidence 8999999999998889999999999999999999999986432110 1111112222222221111 12335889
Q ss_pred HHHhccCCCCCCCCCHHHHHHH
Q 001494 1043 VAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1043 li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
++.+||+.||++||++.|+++.
T Consensus 229 li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 229 ICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HHHHHhccCHhhCCCCccchhh
Confidence 9999999999999999776543
No 126
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.4e-36 Score=349.24 Aligned_cols=252 Identities=22% Similarity=0.302 Sum_probs=196.7
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.++||+|+||.||+|+. .+++.||||++...........+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688899999999999999864 578999999986432222233567888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999998543 3578899999999999999999999 9999999999999999999999999999643211
Q ss_pred CC-----------------------------------------------ccccccccccccCccccccCCCCccchhHHH
Q 001494 955 SS-----------------------------------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSF 987 (1067)
Q Consensus 955 ~~-----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvwsl 987 (1067)
.. .....+||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 00 0012468999999999998889999999999
Q ss_pred HHHHHHHHhCCCCCCccccccccchhhhhhhhhccC--CCCCCCCcchHHHHHHHHHHHHhccCCCCCCC---CCHHHHH
Q 001494 988 GVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD--PRLPIPSHNVQEKLISFVEVAISCLDESPESR---PTMQKVS 1062 (1067)
Q Consensus 988 Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---pt~~evl 1062 (1067)
||++|||++|+.||....... ....+.. ..+..+.. .....++.+++.+|+. +|.+| +++.|++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~p~~--~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l 303 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHE--------TYRKIINWRETLYFPDD--IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIK 303 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHH--------HHHHHHccCCccCCCCC--CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence 999999999999986433211 1111111 11111211 0122347899999997 66665 5999987
Q ss_pred HH
Q 001494 1063 QL 1064 (1067)
Q Consensus 1063 ~~ 1064 (1067)
+.
T Consensus 304 ~h 305 (377)
T cd05629 304 SH 305 (377)
T ss_pred cC
Confidence 63
No 127
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.3e-36 Score=339.73 Aligned_cols=240 Identities=23% Similarity=0.330 Sum_probs=191.4
Q ss_pred CccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHH-HHhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVK-ALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
++||+|+||.||+|+.. +++.||+|++............++..|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999764 68899999986432222222344555554 67889999999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
++|...+... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 81 GELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 9998888542 3478888999999999999999999 999999999999999999999999999976433333344
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.... .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~~~~~~----~~ 222 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--------SQMYDNILHKPLQLPGGKT----VA 222 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--------HHHHHHHhcCCCCCCCCCC----HH
Confidence 56789999999999988899999999999999999999999864321 1122233333333333322 34
Q ss_pred HHHHHHhccCCCCCCCCCHH
Q 001494 1040 FVEVAISCLDESPESRPTMQ 1059 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~ 1059 (1067)
+.+++.+|++.||.+||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 223 ACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHccCCHhhcCCCC
Confidence 88999999999999999764
No 128
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.6e-35 Score=323.83 Aligned_cols=252 Identities=27% Similarity=0.444 Sum_probs=202.8
Q ss_pred cCCCccCccccCCceeEEEEEEC----CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCcee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 871 (1067)
++|+..+.||+|+||+||+|... +...||||++.... .....+++.+|+.++++++||||+++++++.+.+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 56889999999999999999764 24579999986543 2334567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+||||+++++|.+++.... +.+++.++.+++.|++.|++|||++ +|+||||||+||+++.++.++++|||+++..
T Consensus 82 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 82 IITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 9999999999999985432 3689999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCccc--cccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCC
Q 001494 952 KPDSSNWT--ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLP 1027 (1067)
Q Consensus 952 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1027 (1067)
........ ...+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .....+... ..+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~ 228 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--------DVIKAVEDGYRLP 228 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--------HHHHHHHcCCCCC
Confidence 52222211 2334678999999988889999999999999999998 99997533211 111111111 111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+. .....+.+++.+||+.+|++||++.|+++.|+
T Consensus 229 ~~~----~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~ 263 (266)
T cd05033 229 PPM----DCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263 (266)
T ss_pred CCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111 12335889999999999999999999999885
No 129
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.5e-35 Score=327.14 Aligned_cols=254 Identities=22% Similarity=0.371 Sum_probs=201.4
Q ss_pred cCCCccCccccCCceeEEEEEE-----CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-----ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
.+|+..++||+|+||.||+|.. .+++.||+|.+.... .....+++.+|++++++++||||+++++++..++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 4578889999999999999864 356789999987432 233446788999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHHhcccCc--------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC
Q 001494 871 FIVYEYLEMGSLAMILSNDAA--------------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF 936 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~ 936 (1067)
|+||||+++++|.+++..... ...+++.++..++.|++.|++|||++ +|+||||||+||+++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC
Confidence 999999999999999853211 23478899999999999999999999 9999999999999999
Q ss_pred CCCeEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchh
Q 001494 937 KNEARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLN 1013 (1067)
Q Consensus 937 ~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~ 1013 (1067)
++.+|++|||+++....... ......++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~------ 233 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ------ 233 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH------
Confidence 99999999999986543321 1223345678999999988889999999999999999998 88897543211
Q ss_pred hhhhhhhccC-CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1014 LNIALDEILD-PRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1014 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+.. .....+.. ...++.+++.+||+.||++||++.++.+.|+
T Consensus 234 --~~~~~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 234 --EVIEMVRKRQLLPCSED----CPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred --HHHHHHHcCCcCCCCCC----CCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 11111111 11111221 1235889999999999999999999999885
No 130
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-35 Score=334.45 Aligned_cols=199 Identities=27% Similarity=0.433 Sum_probs=173.4
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..++||+|+||.||+++.. +++.+|+|++.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 67999999999999999999765 68889999886542 2233567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... ..+++..+..++.+++.|++|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 83 EHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred ecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999999998543 34788899999999999999999752 7999999999999999999999999999765332
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDF 1003 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~ 1003 (1067)
......|++.|+|||++.+..++.++|||||||++|||++|+.||+.
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred --ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 12345689999999999988899999999999999999999999864
No 131
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=7.2e-36 Score=331.16 Aligned_cols=261 Identities=20% Similarity=0.320 Sum_probs=193.9
Q ss_pred cCCCccCccccCCceeEEEEEE-C-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC---CCCeeeeeeEEEe-----
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-A-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI---RHRNIVKFYGFCS----- 865 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~----- 865 (1067)
++|+..+.||+|+||.||+|+. . +++.||+|++......+ .....+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 3688899999999999999975 3 46889999987543322 1234556677776655 6999999999885
Q ss_pred eCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecc
Q 001494 866 HAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDF 945 (1067)
Q Consensus 866 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~Df 945 (1067)
.....++||||++ +++.+++.... ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 2456899999997 58888885432 34588999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh--------hh
Q 001494 946 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN--------IA 1017 (1067)
Q Consensus 946 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~--------~~ 1017 (1067)
|+++..... .......||+.|+|||.+.+..++.++||||+||++|||++|+.||.............. ..
T Consensus 155 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 155 GLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred cceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 999876533 233456789999999999888899999999999999999999999875432111000000 00
Q ss_pred h------hhccCCCCCCCC-cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1018 L------DEILDPRLPIPS-HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1018 ~------~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. .....+....+. .........+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0 000000000000 000112235789999999999999999999986
No 132
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.7e-35 Score=322.58 Aligned_cols=251 Identities=26% Similarity=0.470 Sum_probs=203.5
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
++|++.+.||+|++|.||+|...+++.||+|.+..... ..+++.+|+.++++++||||+++++++...+..++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 56888999999999999999887788999999864321 24678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 82 LMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred cccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 999999999986433 34589999999999999999999999 99999999999999999999999999998765332
Q ss_pred Cc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCCCcc
Q 001494 956 SN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSHN 1032 (1067)
Q Consensus 956 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1032 (1067)
.. ......+..|+|||+..+..++.++||||||+++|||++ |+.||...... .....+... ....+.
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~-- 227 (261)
T cd05068 158 YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--------EVLQQVDQGYRMPCPP-- 227 (261)
T ss_pred ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCCCC--
Confidence 11 111223457999999988889999999999999999999 99998643211 111111111 111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+.+++.+|++.+|++||++.++.+.|+
T Consensus 228 --~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 228 --GCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred --cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 12345899999999999999999999999886
No 133
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.6e-36 Score=347.75 Aligned_cols=250 Identities=21% Similarity=0.288 Sum_probs=194.7
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.|+..++||+|+||+||+|+. .+++.||+|++...........+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 578899999999999999965 5788999999865322223345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++|+|.+++.+. ..+++..+..++.||+.|++|||++ +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRM---GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 99999999988543 3478888999999999999999999 99999999999999999999999999975331100
Q ss_pred -----------------------------------------------CccccccccccccCccccccCCCCccchhHHHH
Q 001494 956 -----------------------------------------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFG 988 (1067)
Q Consensus 956 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG 988 (1067)
......+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 001124689999999999998999999999999
Q ss_pred HHHHHHHhCCCCCCccccccccchhhhhhhhhcc--CCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCC---HHHHHH
Q 001494 989 VLALEVIKGKHPGDFISLISSSSLNLNIALDEIL--DPRLPIPSHNVQEKLISFVEVAISCLDESPESRPT---MQKVSQ 1063 (1067)
Q Consensus 989 vil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt---~~evl~ 1063 (1067)
|++|||++|+.||....... ....+. ......+.. .....++.+++.+++ .+|.+|++ +.|+++
T Consensus 236 vil~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLE--------TQMKVINWQTSLHIPPQ--AKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHH--------HHHHHHccCCCcCCCCc--ccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 99999999999987443211 111111 111111211 112234677777765 59999997 777764
No 134
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.1e-36 Score=343.97 Aligned_cols=252 Identities=25% Similarity=0.315 Sum_probs=200.9
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3688899999999999999865 478999999987543323334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 999999999999643 24589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc-cccccccccccCccccc------cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC--C
Q 001494 955 SSN-WTELAGTYGYVAPELAY------TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP--R 1025 (1067)
Q Consensus 955 ~~~-~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 1025 (1067)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....+... .
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--------~~~~i~~~~~~ 227 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK--------TYNNIMNFQRF 227 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH--------HHHHHHcCCCc
Confidence 322 23357899999999886 4557889999999999999999999986433211 11111110 1
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1026 LPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1026 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+.. .....++.+++..|++ +|++|||+.++++
T Consensus 228 ~~~~~~--~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 228 LKFPED--PKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred cCCCCC--CCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 111111 1122348899999998 9999999999875
No 135
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=328.79 Aligned_cols=250 Identities=28% Similarity=0.465 Sum_probs=205.6
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.++...++||-|-||.||.|.++ ..-.||||.++.. ....++|+.|+.+|+.++|||+|+++|+|..+..+|||+
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEE
Confidence 45677899999999999998654 5678999998753 334689999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|||..|+|.+|+++.. ...++.-..+.++.||+.|++||..+ .+||||+.++|.|+.++..|||+|||+++.+..+
T Consensus 343 EfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred ecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 9999999999997643 33466667789999999999999999 8999999999999999999999999999988755
Q ss_pred CCccccccc---cccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCC
Q 001494 955 SSNWTELAG---TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPS 1030 (1067)
Q Consensus 955 ~~~~~~~~g---t~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1067)
.+ +..+| +..|.|||.+....++.|+|||+|||+|||+.| |..||.+++.-..... ... +-++..|.
T Consensus 419 TY--TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~L-----LEk--gyRM~~Pe 489 (1157)
T KOG4278|consen 419 TY--TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGL-----LEK--GYRMDGPE 489 (1157)
T ss_pred ce--ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHH-----Hhc--cccccCCC
Confidence 44 34444 468999999988889999999999999999998 7888876553211111 111 11222222
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1031 HNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1031 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
. ++.+++++|+.||++.|.+||+++|+.+.||
T Consensus 490 G----CPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 490 G----CPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred C----CCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 2 3335899999999999999999999998875
No 136
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.4e-36 Score=349.32 Aligned_cols=253 Identities=22% Similarity=0.283 Sum_probs=195.9
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|++.+.||+|+||.||+|+. .+++.||+|++...........+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688999999999999999965 468999999986432212223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|..+...
T Consensus 81 E~~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 81 DYIPGGDMMSLLIRL---GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 999999999998543 3478888899999999999999999 9999999999999999999999999998533100
Q ss_pred -------------------------------------------CCccccccccccccCccccccCCCCccchhHHHHHHH
Q 001494 955 -------------------------------------------SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLA 991 (1067)
Q Consensus 955 -------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 991 (1067)
.......+||+.|+|||++.+..++.++||||+||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 0001234799999999999998999999999999999
Q ss_pred HHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCC---CHHHHHH
Q 001494 992 LEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRP---TMQKVSQ 1063 (1067)
Q Consensus 992 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp---t~~evl~ 1063 (1067)
|||++|+.||......... ...... ......+.. .....++.+++.+|+ .+|.+|+ ++.|+++
T Consensus 235 yell~G~~Pf~~~~~~~~~-----~~i~~~-~~~~~~~~~--~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 235 YEMLVGQPPFLADTPAETQ-----LKVINW-ETTLHIPSQ--AKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred eehhhCCCCCCCCCHHHHH-----HHHhcc-CccccCCCC--CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999999998754321110 000000 011111110 112234677888876 5999999 8888875
No 137
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=7.3e-36 Score=336.87 Aligned_cols=256 Identities=25% Similarity=0.434 Sum_probs=199.5
Q ss_pred cCCCccCccccCCceeEEEEEE------CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeC-
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHA- 867 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~- 867 (1067)
++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+..|+.+++++ +||||++++++|...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 4688999999999999999853 235789999987532 223346678899999999 899999999988654
Q ss_pred CceeEEEEeccCCCHHHHhcccCc--------------------------------------------------------
Q 001494 868 QHSFIVYEYLEMGSLAMILSNDAA-------------------------------------------------------- 891 (1067)
Q Consensus 868 ~~~~lv~E~~~~g~L~~~l~~~~~-------------------------------------------------------- 891 (1067)
...+++|||+++++|.+++.....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 578899999999999998853211
Q ss_pred --cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCc--cccccccccc
Q 001494 892 --AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSN--WTELAGTYGY 967 (1067)
Q Consensus 892 --~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y 967 (1067)
..++++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++.+...... .....++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 13689999999999999999999999 9999999999999999999999999999876433221 2234456789
Q ss_pred cCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHh
Q 001494 968 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAIS 1046 (1067)
Q Consensus 968 ~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 1046 (1067)
+|||++.+..++.++|||||||++|||++ |..||........ ......... ....+. ....++.+++.+
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~----~~~~~~~~~--~~~~~~----~~~~~~~~l~~~ 311 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE----FCRRLKEGT--RMRAPE----YATPEIYSIMLD 311 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH----HHHHHhccC--CCCCCc----cCCHHHHHHHHH
Confidence 99999999999999999999999999998 9999864322110 001111111 111111 122358899999
Q ss_pred ccCCCCCCCCCHHHHHHHhc
Q 001494 1047 CLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1047 cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
||+.+|++||++.|+++.|+
T Consensus 312 cl~~~p~~RPs~~ell~~l~ 331 (337)
T cd05054 312 CWHNNPEDRPTFSELVEILG 331 (337)
T ss_pred HccCChhhCcCHHHHHHHHH
Confidence 99999999999999999875
No 138
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.2e-35 Score=326.64 Aligned_cols=253 Identities=25% Similarity=0.443 Sum_probs=201.9
Q ss_pred cCCCccCccccCCceeEEEEEE------CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
.+|.+.+.||+|+||.||++.. .++..+|+|.+... .....+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 5788899999999999999864 23456899988643 22345678999999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccC----------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCC
Q 001494 870 SFIVYEYLEMGSLAMILSNDA----------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNE 939 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~ 939 (1067)
.++||||+++++|.+++.... ....+++.+++.++.|++.|++|||++ +++||||||+||+++.++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999999986432 123589999999999999999999999 9999999999999999999
Q ss_pred eEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhh
Q 001494 940 ARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNI 1016 (1067)
Q Consensus 940 ~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 1016 (1067)
+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--------~ 230 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------E 230 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------H
Confidence 99999999986543221 1122345678999999988889999999999999999998 89997643321 1
Q ss_pred hhhhccCCCC-CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1017 ALDEILDPRL-PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1017 ~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....+..... ..+.. ...++.+++.+||+.+|.+|||+.|+.+.|+
T Consensus 231 ~~~~i~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 231 VIECITQGRVLQRPRT----CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred HHHHHHcCCcCCCCCC----CCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 1111111111 11111 1234899999999999999999999998875
No 139
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2e-35 Score=323.42 Aligned_cols=254 Identities=26% Similarity=0.367 Sum_probs=201.1
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|++.+.||+|+||.||+|+. .+++.||+|++..... .....+.+|+.++++++||||+++++++..++..|+||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 5789999999999999999975 5788999999864322 22356788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... ..+++.++..++.|++.|++|||++ +|+|||+||+||+++.++.++|+|||++......
T Consensus 86 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 86 EYCGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 999999999988542 3578999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCc
Q 001494 955 SSNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSH 1031 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1067)
........|++.|+|||.+. ...++.++||||+||++|||++|+.||.......... .........+....
T Consensus 160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~--- 233 (267)
T cd06646 160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMSKSNFQPPKLKD--- 233 (267)
T ss_pred ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe---eeecCCCCCCCCcc---
Confidence 33334457889999999874 3447889999999999999999999975332211100 00000111111111
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
......++.+++.+||+.+|++|||++++++.+
T Consensus 234 -~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 234 -KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 112234588999999999999999999998754
No 140
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.3e-35 Score=320.80 Aligned_cols=252 Identities=29% Similarity=0.397 Sum_probs=205.9
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|...+.||+|++|.||+|.. .+++.||+|.+...... ....+++..|++++++++|||++++++++.+.+..++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 477788999999999999975 47899999998643222 3345678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++... ....+++.++..++.+++.|++|||+. +++||||||+||+++.++.++++|||+++......
T Consensus 80 ~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 80 YAENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred eCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 99999999998643 234688999999999999999999999 99999999999999999999999999998776544
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
.......|++.|+|||+..+..++.++|||||||++|||++|+.||..... ......+......... ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~---~~ 224 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--------GALILKIIRGVFPPVS---QM 224 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCc---cc
Confidence 444456788999999999988899999999999999999999999864432 1111112211111111 12
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
...++.+++.+||+.+|++||++.++++.
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 225 YSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 23458999999999999999999999863
No 141
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1e-35 Score=350.61 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=203.4
Q ss_pred HhcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC----
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ---- 868 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 868 (1067)
..++|++.+.||+|+||+||+|+ ..+|+.||||++...... ......+.+|+..+..++|+|++++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34689999999999999999996 457999999998654322 233566889999999999999999988765432
Q ss_pred ----ceeEEEEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEe
Q 001494 869 ----HSFIVYEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVS 943 (1067)
Q Consensus 869 ----~~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~ 943 (1067)
..++||||+++|+|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 368999999999999988643 2335688999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCC--CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhc
Q 001494 944 DFGIAKFLKPDS--SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEI 1021 (1067)
Q Consensus 944 DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1021 (1067)
|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~--------~~~~~~ 257 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME--------EVMHKT 257 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHH
Confidence 999998765321 2233467999999999999999999999999999999999999998643321 111122
Q ss_pred cCCCC-CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1022 LDPRL-PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1022 ~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
..... ..+... ..++.+++.+||+.||++||++.++++.
T Consensus 258 ~~~~~~~~~~~~----~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 LAGRYDPLPPSI----SPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred hcCCCCCCCCCC----CHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 21111 122222 2348899999999999999999998763
No 142
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.6e-35 Score=320.18 Aligned_cols=251 Identities=27% Similarity=0.430 Sum_probs=200.9
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.+|+..+.||+|+||.||+|+.+++..+|+|++..... ...++.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 35788899999999999999888788899999864321 13568889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 80 YMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred cCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 999999999985432 3588999999999999999999999 99999999999999999999999999998654322
Q ss_pred Cc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 956 SN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 956 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.. .....++..|+|||.+.+..++.++||||||+++||+++ |+.||+....... ........ ....+..
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~~~~~~--~~~~~~~-- 225 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV-----VESVSAGY--RLYRPKL-- 225 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH-----HHHHHcCC--cCCCCCC--
Confidence 11 111223457999999998889999999999999999999 8999864332111 11111111 1111211
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+.++.+++.+||+.+|++|||+.|+++.|.
T Consensus 226 --~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 226 --APTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred --CCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 2335899999999999999999999999873
No 143
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3e-35 Score=327.22 Aligned_cols=258 Identities=24% Similarity=0.391 Sum_probs=202.2
Q ss_pred hcCCCccCccccCCceeEEEEEECC-----------------CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCee
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELAS-----------------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 857 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 857 (1067)
..+|++.+.||+|+||.||+|+... +..||+|++..... ....+++.+|++++++++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCE
Confidence 3578999999999999999986542 34689999875422 2445788999999999999999
Q ss_pred eeeeEEEeeCCceeEEEEeccCCCHHHHhcccC--------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCC
Q 001494 858 VKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDA--------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISS 929 (1067)
Q Consensus 858 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~ 929 (1067)
+++++++..++..++||||+++++|.+++.... ....+++..++.++.|++.|++|||++ +|+||||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp 158 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLAT 158 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccch
Confidence 999999999999999999999999999986433 123589999999999999999999999 999999999
Q ss_pred CceeeCCCCCeEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCccc
Q 001494 930 KNVLLDFKNEARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPGDFIS 1005 (1067)
Q Consensus 930 ~Nill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--g~~p~~~~~ 1005 (1067)
+||+++.++.++++|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred hceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 999999999999999999986543321 1223456778999999988889999999999999999998 677775432
Q ss_pred cccccchhhhhhhhhc-----cCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1006 LISSSSLNLNIALDEI-----LDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1006 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.... ....... .......+. ..+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 239 ~~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 239 DQQV-----IENAGHFFRDDGRQIYLPRPP----NCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred hHHH-----HHHHHhccccccccccCCCcc----CCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 2110 0000111 000011111 12235899999999999999999999999885
No 144
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.4e-35 Score=330.86 Aligned_cols=252 Identities=23% Similarity=0.437 Sum_probs=198.9
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCc----EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGE----IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
.+|+..+.||+|+||.||+|.+. +++ .||+|++.... .....+++.+|+.+++.++||||++++|++... ..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 46899999999999999999753 343 48999986432 233456789999999999999999999998764 57
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++|+||+++|++.+++... ...+++..+++++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 84 QLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 8999999999999998643 23578899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcc--ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 951 LKPDSSNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 951 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
........ ....++..|+|||++.+..++.++|||||||++|||++ |+.||+...... ....... ....+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-----~~~~~~~--~~~~~ 231 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEK--GERLP 231 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhC--CCCCC
Confidence 65433222 12234678999999999899999999999999999998 999987543211 0111111 11112
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+... ..++.+++.+||+.+|++||++.++++.+.
T Consensus 232 ~~~~~----~~~~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 232 QPPIC----TIDVYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred CCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22222 234889999999999999999999998764
No 145
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.1e-35 Score=326.87 Aligned_cols=262 Identities=22% Similarity=0.353 Sum_probs=200.3
Q ss_pred cCCCccCccccCCceeEEEEEEC-----------------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-----------------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 858 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 858 (1067)
++|++.++||+|+||.||+++.. ++..||+|++.... .....+++.+|+.+++.++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 46889999999999999997532 24468999987542 223356789999999999999999
Q ss_pred eeeEEEeeCCceeEEEEeccCCCHHHHhcccCc--------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCC
Q 001494 859 KFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAA--------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSK 930 (1067)
Q Consensus 859 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~ 930 (1067)
++++++...+..++||||+++++|.+++..... ...+++.++..++.|++.|++|||+. +++||||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~ 159 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR 159 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence 999999999999999999999999999864321 12477889999999999999999999 9999999999
Q ss_pred ceeeCCCCCeEEeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCcccc
Q 001494 931 NVLLDFKNEARVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPGDFISL 1006 (1067)
Q Consensus 931 Nill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--g~~p~~~~~~ 1006 (1067)
||+++.++.++++|||+++.+...... .....+++.|+|||...++.++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 999999999999999999865433211 122334678999999888889999999999999999998 6778754332
Q ss_pred ccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1007 ISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1007 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....................+.+.. ....+.+++.+||+.||++||++.||.+.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 240 EQVIENTGEFFRDQGRQVYLPKPAL----CPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHHHHhhccccccCCCCCC----CCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1111000000000001111111211 2235889999999999999999999999886
No 146
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3e-35 Score=326.80 Aligned_cols=261 Identities=22% Similarity=0.349 Sum_probs=199.3
Q ss_pred cCCCccCccccCCceeEEEEEECC---------------CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELAS---------------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 860 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 860 (1067)
++|++.++||+|+||.||+++... ...||+|++.... .......+.+|++++++++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 578899999999999999986532 2358999987532 23345678999999999999999999
Q ss_pred eEEEeeCCceeEEEEeccCCCHHHHhcccCc---------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCc
Q 001494 861 YGFCSHAQHSFIVYEYLEMGSLAMILSNDAA---------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKN 931 (1067)
Q Consensus 861 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~N 931 (1067)
++++...+..++||||+++++|.+++..... ...+++..+++++.|++.|++|||++ +++||||||+|
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N 159 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN 159 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence 9999999999999999999999998854221 12468889999999999999999999 99999999999
Q ss_pred eeeCCCCCeEEeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCccccc
Q 001494 932 VLLDFKNEARVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPGDFISLI 1007 (1067)
Q Consensus 932 ill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--g~~p~~~~~~~ 1007 (1067)
|+++.++.+||+|||+++........ .....+++.|+|||++.++.++.++|||||||++|||++ |..||+.....
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 99999999999999999765432211 122345678999999988889999999999999999998 56676543321
Q ss_pred cccchhhhhhhhhc-cCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1008 SSSSLNLNIALDEI-LDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1008 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
........ ..... .......+.. .+..+.+++.+||+.+|++||++.+|++.|+
T Consensus 240 ~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 QVIENTGE-FFRNQGRQIYLSQTPL----CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHH-hhhhccccccCCCCCC----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11000000 00000 0000111111 1235899999999999999999999999885
No 147
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2e-35 Score=326.24 Aligned_cols=253 Identities=22% Similarity=0.342 Sum_probs=201.3
Q ss_pred CCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
+|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+..|+.+++.++||||+++++++.+.+..
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 4677889999999999999753 35789999987542 223356788999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHHhcccC-------------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC
Q 001494 871 FIVYEYLEMGSLAMILSNDA-------------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK 937 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~ 937 (1067)
++++||+++++|.+++.... ....+++..+.+++.|++.|++|+|++ +|+||||||+||+++.+
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCC
Confidence 99999999999999984321 123578888999999999999999999 99999999999999999
Q ss_pred CCeEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhh
Q 001494 938 NEARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNL 1014 (1067)
Q Consensus 938 ~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~ 1014 (1067)
+.+||+|||+++....... ......+++.|+|||.+.+..++.++||||+||++|||++ |..||.....
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------- 232 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------- 232 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--------
Confidence 9999999999886543321 1123445778999999988889999999999999999998 7888754322
Q ss_pred hhhhhhccCCCCC-CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1015 NIALDEILDPRLP-IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1015 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
......+...... .+.. ....+.+++.+||+.+|++||+++++++.|+
T Consensus 233 ~~~~~~i~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 233 QDVIEMIRNRQVLPCPDD----CPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHHHcCCcCCCCCC----CCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 1122222222221 1222 2334889999999999999999999999885
No 148
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5e-35 Score=317.20 Aligned_cols=247 Identities=27% Similarity=0.438 Sum_probs=196.1
Q ss_pred CccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCC
Q 001494 802 HCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMG 880 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 880 (1067)
++||+|+||.||+|+. .+++.||+|.+.... .......+.+|++++++++||||+++++++...+..++||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 4699999999999975 478999999876432 2334567899999999999999999999999999999999999999
Q ss_pred CHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcc--
Q 001494 881 SLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNW-- 958 (1067)
Q Consensus 881 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~-- 958 (1067)
+|.+++... ...+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+|++|||++..........
T Consensus 79 ~L~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 79 DFLTFLRTE--GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred cHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 999998543 23578999999999999999999999 99999999999999999999999999997644221111
Q ss_pred ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHH
Q 001494 959 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKL 1037 (1067)
Q Consensus 959 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1067)
.....+..|+|||.+.++.++.++||||+||++|||++ |..||+...... ........ .....+. ...
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-----~~~~~~~~--~~~~~~~----~~~ 222 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-----TREAIEQG--VRLPCPE----LCP 222 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-----HHHHHHcC--CCCCCcc----cCC
Confidence 11123457999999988889999999999999999998 888876432211 11111111 1111111 123
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1038 ISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1038 ~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.++.+++.+|++.+|++|||+.|+.+.|+
T Consensus 223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 223 DAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 35889999999999999999999999986
No 149
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.1e-35 Score=319.97 Aligned_cols=252 Identities=26% Similarity=0.427 Sum_probs=201.5
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|...++||+|+||.||+|.. ++++.||+|++... ....+++.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 4578889999999999999864 46889999998642 222467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++.... ...+++..++.++.|+++|++|||++ +++||||||+||+++.++.+||+|||.+......
T Consensus 82 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 82 EFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 9999999999985432 34588999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCcc-ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 955 SSNW-TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 955 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
.... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||........ ........ ....+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~--~~~~~~~- 229 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YELLEKGY--RMERPEG- 229 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCCC--CCCCCCC-
Confidence 2211 12234568999999988889999999999999999998 8999764332110 11111111 1111222
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...++.+++.+||+.+|++||++.++++.|+
T Consensus 230 ---~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 230 ---CPPKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred ---CCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 2235889999999999999999999999886
No 150
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.2e-35 Score=325.82 Aligned_cols=254 Identities=26% Similarity=0.464 Sum_probs=202.4
Q ss_pred cCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
.+|...+.||+|+||.||+|+.. ++..+|+|.+... .....+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 45788899999999999998642 4566899988643 23334678899999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccC-------------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC
Q 001494 870 SFIVYEYLEMGSLAMILSNDA-------------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF 936 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~ 936 (1067)
.++||||+++++|.+++.... ....+++..++.++.|++.|++|||++ +|+||||||+||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 999999999999999986432 123588999999999999999999999 9999999999999999
Q ss_pred CCCeEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchh
Q 001494 937 KNEARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLN 1013 (1067)
Q Consensus 937 ~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~ 1013 (1067)
++.++|+|||+++....... ......++..|+|||.+.+..++.++|||||||++|||+| |+.||.......
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----- 233 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE----- 233 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 99999999999976543321 1123446788999999998889999999999999999999 999976433211
Q ss_pred hhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1014 LNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....+.......... ..+..+.+++.+||+.+|++|||+.+|+++|+
T Consensus 234 ---~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 234 ---VIECITQGRVLERPR---VCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred ---HHHHHhCCCCCCCCc---cCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 111122222111111 12235889999999999999999999999885
No 151
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.7e-36 Score=341.40 Aligned_cols=255 Identities=21% Similarity=0.300 Sum_probs=199.3
Q ss_pred HHhcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCcee
Q 001494 793 RATNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 793 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 871 (1067)
...++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+++..|
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 34578999999999999999999765 68899999986432222233456788999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+||||+++|+|.+++... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 120 lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~ 192 (371)
T cd05622 120 MVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (371)
T ss_pred EEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence 999999999999998542 378888899999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC-ccccccccccccCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC--
Q 001494 952 KPDSS-NWTELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP-- 1024 (1067)
Q Consensus 952 ~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 1024 (1067)
..... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .....+...
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~~~~~ 264 (371)
T cd05622 193 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMNHKN 264 (371)
T ss_pred CcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCC
Confidence 54322 223567999999999987543 788999999999999999999998743321 111222211
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 001494 1025 RLPIPSHNVQEKLISFVEVAISCLDESPES--RPTMQKVSQL 1064 (1067)
Q Consensus 1025 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~evl~~ 1064 (1067)
....+. .......+.+++.+|+..++.+ ||++.|+++.
T Consensus 265 ~~~~~~--~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 265 SLTFPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred cccCCC--cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 111121 1122334788999999844443 7899988764
No 152
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.3e-35 Score=319.33 Aligned_cols=251 Identities=24% Similarity=0.405 Sum_probs=202.0
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
++|++.++||+|+||.||+|...+++.||+|.+..... ..+++.+|+.++++++|||++++++++. .+..++|||
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE 80 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence 56888999999999999999988899999999874322 2467889999999999999999999874 467899999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 81 YMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred cCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 999999999885433 34689999999999999999999999 99999999999999999999999999998765322
Q ss_pred C-ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 956 S-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 956 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
. ......++..|+|||++.+..++.++||||||+++||+++ |+.||....... ........ .....+..
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~--~~~~~~~~-- 227 (260)
T cd05067 157 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-----VIQNLERG--YRMPRPDN-- 227 (260)
T ss_pred cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-----HHHHHHcC--CCCCCCCC--
Confidence 2 1123345678999999988889999999999999999999 999986433211 01111111 11111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...++.+++.+|++.+|++|||++++.+.|+
T Consensus 228 --~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 228 --CPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred --CCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 2235899999999999999999999999886
No 153
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=331.53 Aligned_cols=245 Identities=27% Similarity=0.370 Sum_probs=199.8
Q ss_pred CccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCC
Q 001494 802 HCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMG 880 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 880 (1067)
-+||+|.||+||.|+.. +...+|||.+.... .+..+-+.+||...++++|.|||+++|.+.+++.+-|.||-++||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 46999999999999765 45668999987542 233567889999999999999999999999999999999999999
Q ss_pred CHHHHhcccCccCCC--ChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeC-CCCCeEEeccccceecCCCCCc
Q 001494 881 SLAMILSNDAAAEDL--EWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLD-FKNEARVSDFGIAKFLKPDSSN 957 (1067)
Q Consensus 881 ~L~~~l~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~-~~~~~kl~DfG~a~~~~~~~~~ 957 (1067)
+|...++.. -+++ .+.++-.+.+||++||.|||++ .|||||||-+|||++ ..|.+||+|||-++.+..-...
T Consensus 658 SLSsLLrsk--WGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~ 732 (1226)
T KOG4279|consen 658 SLSSLLRSK--WGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC 732 (1226)
T ss_pred cHHHHHHhc--cCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence 999999532 3345 6677778899999999999999 999999999999996 5689999999999988766666
Q ss_pred cccccccccccCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 958 WTELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 958 ~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
..++.||..|||||++..++ |+.++|||||||++.||.||++||-........ ...-.+..... +...+
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA-----MFkVGmyKvHP----~iPee 803 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA-----MFKVGMYKVHP----PIPEE 803 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-----hhhhcceecCC----CCcHH
Confidence 67789999999999998765 889999999999999999999998644321111 11111112222 23345
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+...+|.+|+.+||.+||+|.++++
T Consensus 804 lsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 804 LSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 5566899999999999999999999875
No 154
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.9e-35 Score=335.18 Aligned_cols=256 Identities=25% Similarity=0.415 Sum_probs=201.2
Q ss_pred cCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCC
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQ 868 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 868 (1067)
++|...++||+|+||.||+|++. .++.||+|++...... ...+.+..|++++.++. |||||++++++...+
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS--SEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh--hHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 46788899999999999999753 3468999999754322 23457889999999997 999999999999999
Q ss_pred ceeEEEEeccCCCHHHHhcccCc---------------------------------------------------------
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAA--------------------------------------------------------- 891 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~--------------------------------------------------------- 891 (1067)
..++||||+++|+|.+++++...
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999999864321
Q ss_pred --------------------------------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCcee
Q 001494 892 --------------------------------------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVL 933 (1067)
Q Consensus 892 --------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nil 933 (1067)
...+++.++..++.|++.|++|||+. +|+||||||+||+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEE
Confidence 12367788899999999999999998 9999999999999
Q ss_pred eCCCCCeEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccc
Q 001494 934 LDFKNEARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSS 1010 (1067)
Q Consensus 934 l~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~ 1010 (1067)
++.++.+|++|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~- 350 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ- 350 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-
Confidence 99999999999999986543221 1123456788999999988889999999999999999998 8899864332110
Q ss_pred chhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1011 SLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....... ..+...+... ..++.+++.+||+.+|.+||+++|+++.|+
T Consensus 351 ---~~~~~~~--~~~~~~p~~~----~~~l~~li~~cl~~~P~~RPs~~ell~~L~ 397 (401)
T cd05107 351 ---FYNAIKR--GYRMAKPAHA----SDEIYEIMQKCWEEKFEIRPDFSQLVHLVG 397 (401)
T ss_pred ---HHHHHHc--CCCCCCCCCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 0000000 0111222222 235899999999999999999999999886
No 155
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.4e-35 Score=317.93 Aligned_cols=250 Identities=26% Similarity=0.460 Sum_probs=201.3
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
++|++.++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++||+++++++++. ....++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 46888999999999999999888888999999875322 2357889999999999999999999885 456899999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ...+++.++..++.+++.|++|||+. +|+||||||+||+++.++.++|+|||.+..+....
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 81 YMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred ecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 999999999986432 34578999999999999999999999 99999999999999999999999999998765432
Q ss_pred Cc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCCCcc
Q 001494 956 SN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSHN 1032 (1067)
Q Consensus 956 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1032 (1067)
.. .....++..|+|||...+..++.++||||||+++|||++ |+.||...... .....+... ..+.+.
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~-- 226 (260)
T cd05070 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--------EVLEQVERGYRMPCPQ-- 226 (260)
T ss_pred cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCCCC--
Confidence 21 122335668999999988889999999999999999999 88898643221 111111111 111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....++.+++.+|++.+|++|||++++.++|+
T Consensus 227 --~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 227 --DCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred --cCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 22345899999999999999999999999886
No 156
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.6e-35 Score=318.92 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=203.7
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..++||+|+||.||+++.. +++.||+|.+.... .....+.+..|+.+++.++||||+++++++.+++..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4778899999999999999654 78899999986432 22335678889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|++++++.+++... ....+++..+..++.|++.|++|||++ +|+|+||||+||+++.++.++++|||.++......
T Consensus 79 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 79 YCDGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 99999999888532 234578899999999999999999999 99999999999999999999999999998765444
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCC-CCCCcchH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRL-PIPSHNVQ 1034 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1034 (1067)
.......|++.|+|||++.+..++.++||||||+++|+|++|+.||+..... .....+..... ..+..
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~--- 223 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK--------NLILKVCQGSYKPLPSH--- 223 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH--------HHHHHHhcCCCCCCCcc---
Confidence 4344567889999999998888999999999999999999999998643321 11111111111 11211
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
....+.+++.+||+.||++|||+.+++..
T Consensus 224 -~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 224 -YSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -cCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 22348899999999999999999999875
No 157
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.3e-35 Score=324.99 Aligned_cols=261 Identities=22% Similarity=0.295 Sum_probs=199.4
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|++|.||+|+.. +++.||+|++......+ ...+.+.+|+.++++++||||+++++++.+++..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-GVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccC-CchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 4778899999999999999764 78999999986543222 234677889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|++ +++.+++........+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 997 58888876544446689999999999999999999999 99999999999999999999999999998765443
Q ss_pred CccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh----------------hhh
Q 001494 956 SNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN----------------IAL 1018 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~----------------~~~ 1018 (1067)
.......+++.|+|||.+.+. .++.++||||+||++|||+||+.||.............. ...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 333445678899999987654 478899999999999999999999864322110000000 000
Q ss_pred hhccCCCCCCC--CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1019 DEILDPRLPIP--SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1019 ~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.... +..... .........++.+++.+||+.||++|||+.++++
T Consensus 236 ~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 236 KNTF-PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred Hhhc-cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 000000 0000012235789999999999999999999975
No 158
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.5e-35 Score=319.34 Aligned_cols=250 Identities=27% Similarity=0.428 Sum_probs=200.7
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.+|++.++||+|+||+||+|+..++..||+|++..... ..+++.+|++++++++||||+++++++. .+..++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE 80 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEE
Confidence 46889999999999999999887777899999874322 2357889999999999999999999875 456899999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++|+|.+++.... ...+++..+..++.|+++|++|+|+. +++||||||+||+++.++.+||+|||.++......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 81 YMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred cCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 999999999996432 34578999999999999999999999 99999999999999999999999999998765433
Q ss_pred Ccc-ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCCCcc
Q 001494 956 SNW-TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSHN 1032 (1067)
Q Consensus 956 ~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1032 (1067)
... ....++..|+|||+..+..++.++||||||+++|||++ |+.||...... .....+... ....
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~~~~~~~---- 224 (262)
T cd05071 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYRMPC---- 224 (262)
T ss_pred cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhcCCCCCC----
Confidence 221 23345678999999988889999999999999999999 88887643221 111111111 1111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..+...++.+++.+|++.+|++||++.++++.|+
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 225 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 1233446889999999999999999999999886
No 159
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=9e-35 Score=320.15 Aligned_cols=252 Identities=25% Similarity=0.385 Sum_probs=198.7
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..++||+|+||.||+|.. .+++.||+|++.... .....+++.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 3678889999999999999964 678999999986432 2234567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++++++..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 79 EFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred ecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 999999997553 367888899999999999999999 9999999999999999999999999999865432
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
......|++.|+|||++.+..++.++||||||+++|||++|+.||.......... ........+......... ..
T Consensus 149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~ 223 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-MPLQLLQCIVDEDPPVLP--VG 223 (279)
T ss_pred --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-chHHHHHHHhccCCCCCC--CC
Confidence 2234578999999999998889999999999999999999999986432211110 001111111111111000 01
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
....++.+++.+|++.+|++||++.|+++.
T Consensus 224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 224 QFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 122348899999999999999999999764
No 160
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.2e-35 Score=328.81 Aligned_cols=260 Identities=17% Similarity=0.281 Sum_probs=197.6
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|...++||+|+||.||+|+.. +++.||+|++....... ....+.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC--cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 56888999999999999999754 68889999987543222 2345778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++ ++.+++... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 84 EYLDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred eCCCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 99985 777776432 23478899999999999999999999 9999999999999999999999999999865544
Q ss_pred CCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh-------hhhhhh------
Q 001494 955 SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL-------NIALDE------ 1020 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~-------~~~~~~------ 1020 (1067)
........+++.|+|||.+.+ ..++.++||||+||++|||+||+.||............. ......
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 444445578899999998765 457899999999999999999999986433211100000 000000
Q ss_pred ---ccCCCCCC-C-CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1021 ---ILDPRLPI-P-SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1021 ---~~~~~~~~-~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+.... + .........++.+++.+|++.||.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000000 0 0000112235789999999999999999999986
No 161
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=7.5e-35 Score=316.74 Aligned_cols=245 Identities=26% Similarity=0.423 Sum_probs=194.5
Q ss_pred ccccCCceeEEEEEE---CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 803 CIGKGGQGSVYKVEL---ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 803 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
.||+|+||.||+|.+ .+++.||+|++.... ......+++..|+.+++.++||||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 589999999999854 367889999986443 23345678899999999999999999999885 4567899999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcc-
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNW- 958 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~- 958 (1067)
++|.+++... ..+++..+.+++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 80 GPLNKFLQKN---KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 9999998543 3588999999999999999999999 99999999999999999999999999998765433211
Q ss_pred --ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 959 --TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 959 --~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
....+++.|+|||.+....++.++|||||||++|||++ |+.||....... ........ .....+...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~i~~~--~~~~~~~~~--- 223 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE-----VTQMIESG--ERMECPQRC--- 223 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHCC--CCCCCCCCC---
Confidence 12234578999999988889999999999999999998 999986433211 11111111 111222222
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..++.+++.+||+.||++||++++|++.|+
T Consensus 224 -~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 224 -PPEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred -CHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 234889999999999999999999999885
No 162
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=6.5e-35 Score=322.87 Aligned_cols=255 Identities=23% Similarity=0.353 Sum_probs=200.4
Q ss_pred hcCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 868 (1067)
.++|++.++||+|+||.||+|..+ .+..||+|.+.... .......+.+|+.++++++||||+++++++.+.+
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 467899999999999999998543 24579999876432 2333456889999999999999999999999999
Q ss_pred ceeEEEEeccCCCHHHHhcccCc-------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeE
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAA-------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEAR 941 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~k 941 (1067)
..++||||+++|+|.+++..... ....++..+..++.|++.|++|||++ +|+||||||+||+++.++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEE
Confidence 99999999999999999964221 23456778889999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhh
Q 001494 942 VSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIAL 1018 (1067)
Q Consensus 942 l~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1018 (1067)
++|||+++........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||...... ...
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--------~~~ 231 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------QVL 231 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHH
Confidence 9999999865432221 122345678999999988889999999999999999998 78887543221 111
Q ss_pred hhccCCCC-CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1019 DEILDPRL-PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1019 ~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..+..... ..+.. ....+.+++.+|++.+|++|||+.++++.|+
T Consensus 232 ~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 276 (288)
T cd05061 232 KFVMDGGYLDQPDN----CPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276 (288)
T ss_pred HHHHcCCCCCCCCC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11221111 11111 1235899999999999999999999999875
No 163
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.5e-34 Score=313.11 Aligned_cols=247 Identities=26% Similarity=0.423 Sum_probs=198.0
Q ss_pred CccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCC
Q 001494 802 HCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGS 881 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 881 (1067)
++||+|+||.||+|...+++.||+|++..... ......+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP--QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 46999999999999988899999999875432 2334568899999999999999999999999999999999999999
Q ss_pred HHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcc-cc
Q 001494 882 LAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNW-TE 960 (1067)
Q Consensus 882 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~ 960 (1067)
|.+++... ...+++..+..++.+++.|+.|+|++ +++||||||+||+++.++.+|++|||++.......... ..
T Consensus 79 L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 79 FLSFLRKK--KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 99988543 23578999999999999999999999 99999999999999999999999999997644322111 12
Q ss_pred ccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 961 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 961 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
..+++.|+|||++.+..++.++||||||+++||+++ |..||........ ........ ....+.. ....
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~-----~~~~~~~~--~~~~~~~----~~~~ 222 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA-----REQVEKGY--RMSCPQK----CPDD 222 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH-----HHHHHcCC--CCCCCCC----CCHH
Confidence 234567999999988889999999999999999998 9999864332111 01111111 1111221 2235
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1040 FVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
+.+++.+|++.+|++||++.|++++|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 899999999999999999999999986
No 164
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5e-35 Score=322.90 Aligned_cols=253 Identities=23% Similarity=0.296 Sum_probs=199.7
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|+..+.||+|+||.||++.. .+++.||+|.+...........+.+..|+.++++++|++++.+++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 67778999999999999865 57899999998654333333345677899999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++++|.+++.... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~ 156 (285)
T cd05630 82 MNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-Q 156 (285)
T ss_pred cCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-c
Confidence 99999998885432 23588999999999999999999999 9999999999999999999999999999765432 2
Q ss_pred ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHH
Q 001494 957 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEK 1036 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1067)
......|++.|+|||++.+..++.++||||+||++|||++|+.||......... ........... ...+.. .
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~~~~---~~~~~~----~ 228 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKEVQ---EEYSEK----F 228 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhhhhh---hhcCcc----C
Confidence 223457899999999999889999999999999999999999998743211000 00000001110 011111 2
Q ss_pred HHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 001494 1037 LISFVEVAISCLDESPESRPT-----MQKVSQ 1063 (1067)
Q Consensus 1037 ~~~l~~li~~cl~~dP~~Rpt-----~~evl~ 1063 (1067)
..++.+++.+||+.||.+||| +.|+++
T Consensus 229 ~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 229 SPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 234789999999999999999 788875
No 165
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8.7e-35 Score=319.29 Aligned_cols=253 Identities=23% Similarity=0.366 Sum_probs=195.9
Q ss_pred CCccCccccCCceeEEEEEECCC-c--EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC------C
Q 001494 798 FDDEHCIGKGGQGSVYKVELASG-E--IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA------Q 868 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~~-~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 868 (1067)
|.++++||+|+||.||+|+.... . .||+|.+..... .....+.+..|+++++.++||||+++++++... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 35678899999999999976543 2 589998875432 233457788999999999999999999987432 2
Q ss_pred ceeEEEEeccCCCHHHHhcccC---ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDA---AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDF 945 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~Df 945 (1067)
..++||||+++|+|.+++.... ....+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 5689999999999998874321 223588999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhcc
Q 001494 946 GIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEIL 1022 (1067)
Q Consensus 946 G~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1022 (1067)
|+++.+...... .....+++.|+|||...+..++.++||||||+++|||++ |+.||...... .....+.
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~ 228 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--------EIYDYLR 228 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHH
Confidence 999876533221 122345678999999998889999999999999999999 78888643221 1111111
Q ss_pred CC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1023 DP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1023 ~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.. ....+.. ....+.+++.+||+.+|++|||+.++++.|+
T Consensus 229 ~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 269 (272)
T cd05075 229 QGNRLKQPPD----CLDGLYSLMSSCWLLNPKDRPSFETLRCELE 269 (272)
T ss_pred cCCCCCCCCC----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11 1111222 2234889999999999999999999999875
No 166
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7e-35 Score=323.65 Aligned_cols=249 Identities=27% Similarity=0.460 Sum_probs=202.1
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|+..+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++..+...|+||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 5788899999999999999964 57899999998753322 2466889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++.. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 97 e~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 97 EYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred cccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 99999999999853 2478899999999999999999999 9999999999999999999999999998865544
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........+++.|+|||.+.+..++.++|||||||++|||++|+.||........ ... ......+....+ .
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~----~~~-~~~~~~~~~~~~----~ 240 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----LYL-IATNGTPELQNP----E 240 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh----HHH-HhcCCCCCCCCc----c
Confidence 3333445788999999999888899999999999999999999999864332110 000 000011111111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.....+.+++.+||..+|++|||+.|+++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 23345889999999999999999999986
No 167
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=8.8e-35 Score=319.96 Aligned_cols=256 Identities=24% Similarity=0.362 Sum_probs=200.8
Q ss_pred hcCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 868 (1067)
.++|...+.||+|+||.||+|... .+..||+|.+.... .......+..|+.++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 456888999999999999999764 35779999876432 2233467899999999999999999999999999
Q ss_pred ceeEEEEeccCCCHHHHhcccCc----cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC---CeE
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAA----AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN---EAR 941 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~---~~k 941 (1067)
..++||||+++++|.+++..... ...+++.++.+++.||+.|++|||++ +++||||||+||+++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceE
Confidence 99999999999999999865432 23589999999999999999999999 999999999999998765 599
Q ss_pred EeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhh
Q 001494 942 VSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIAL 1018 (1067)
Q Consensus 942 l~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1018 (1067)
++|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||+...... .....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-----~~~~~ 234 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-----VMEFV 234 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHH
Confidence 9999999876322211 112233567999999988889999999999999999997 999986433211 01111
Q ss_pred hhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1019 DEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.. ......+... ..++.+++.+|++.+|++||++.+|++.|+
T Consensus 235 ~~--~~~~~~~~~~----~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 TG--GGRLDPPKGC----PGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred Hc--CCcCCCCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 11 1111122222 235889999999999999999999999875
No 168
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6e-35 Score=321.51 Aligned_cols=254 Identities=24% Similarity=0.371 Sum_probs=203.3
Q ss_pred cCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
++|++.+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.+++.++||||+++++++.....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 56888999999999999998654 34689999986432 22335678899999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccCc-------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEE
Q 001494 870 SFIVYEYLEMGSLAMILSNDAA-------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARV 942 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl 942 (1067)
.++||||+++|+|.+++..... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEE
Confidence 9999999999999999864322 23478899999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhh
Q 001494 943 SDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALD 1019 (1067)
Q Consensus 943 ~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 1019 (1067)
+|||+++....... ......++..|+|||.+.+..++.++|||||||++||+++ |..||....... ...
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--------~~~ 232 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--------VLK 232 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--------HHH
Confidence 99999976543321 1223456788999999988889999999999999999998 899986433211 111
Q ss_pred hccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1020 EILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1020 ~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+... ....+... ..++.+++.+||+.+|++|||+.++++.|+
T Consensus 233 ~~~~~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 233 FVIDGGHLDLPENC----PDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHhcCCCCCCCCCC----CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11111 12222222 335889999999999999999999999886
No 169
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.7e-35 Score=322.03 Aligned_cols=253 Identities=23% Similarity=0.282 Sum_probs=199.7
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|+..+.||+|+||+||+|.. .+++.||+|.+...........+.+.+|++++++++|++++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 66778899999999999865 57899999998654322223345578899999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG-E 156 (285)
T ss_pred ccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCC-C
Confidence 99999998875432 33589999999999999999999999 9999999999999999999999999999765432 2
Q ss_pred ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHH
Q 001494 957 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEK 1036 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1067)
......|+..|+|||++.+..++.++|+||+||++|||++|+.||........ .......+.......+.. .
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~ 228 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK----REEVDRRVLETEEVYSAK----F 228 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHhhhccccccCcc----C
Confidence 22345789999999999888899999999999999999999999864322111 111111122222122222 2
Q ss_pred HHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 001494 1037 LISFVEVAISCLDESPESRPT-----MQKVSQ 1063 (1067)
Q Consensus 1037 ~~~l~~li~~cl~~dP~~Rpt-----~~evl~ 1063 (1067)
...+.+++..|++.||++||+ +.++++
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 234789999999999999999 666654
No 170
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=9.8e-35 Score=319.73 Aligned_cols=252 Identities=24% Similarity=0.377 Sum_probs=196.5
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCc----EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGE----IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
.+|+..+.||+|+||+||+|... +++ .||+|.+... .......++..|+..+++++||||+++++++. ....
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCcc
Confidence 46888899999999999999753 454 4777777532 12233467888888999999999999999875 4567
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++++||+++|+|.+++... ...+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 8999999999999999542 23589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 951 LKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 951 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
...... ......++..|+|||.+.+..++.++|||||||++||+++ |+.||........ ....... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~--~~~~ 231 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-----PDLLEKG--ERLA 231 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCC--CcCC
Confidence 643322 2234456778999999988889999999999999999998 9999864332110 0011100 1111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+... ...+.+++.+||+.+|.+|||+.|+++.|+
T Consensus 232 ~~~~~----~~~~~~li~~c~~~~p~~Rps~~el~~~l~ 266 (279)
T cd05111 232 QPQIC----TIDVYMVMVKCWMIDENVRPTFKELANEFT 266 (279)
T ss_pred CCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111 224788999999999999999999999874
No 171
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.2e-34 Score=314.87 Aligned_cols=245 Identities=24% Similarity=0.393 Sum_probs=192.8
Q ss_pred ccccCCceeEEEEEEC---CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 803 CIGKGGQGSVYKVELA---SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 803 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
.||+|+||.||+|... ++..||+|+..... .....+++.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 3899999999998653 45579999986542 2334567999999999999999999999885 4578999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcc-
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNW- 958 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~- 958 (1067)
++|.+++... ...+++.++.+++.|++.|++|||++ +++||||||+||+++.++.+|++|||+++.........
T Consensus 79 ~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 79 GPLNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 9999998532 34589999999999999999999999 99999999999999999999999999998654332211
Q ss_pred --ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 959 --TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 959 --~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
....+++.|+|||.+.+..++.++|||||||++||+++ |+.||........ ....... .....+...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~--~~~~~~~~~--- 223 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV-----MSFIEQG--KRLDCPAEC--- 223 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH-----HHHHHCC--CCCCCCCCC---
Confidence 11223578999999888889999999999999999996 9999864432110 0111111 111122222
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..++.+++.+||+.+|++||++.+|.+.|+
T Consensus 224 -~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~ 253 (257)
T cd05115 224 -PPEMYALMKDCWIYKWEDRPNFAKVEERMR 253 (257)
T ss_pred -CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 235889999999999999999999999886
No 172
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=6.2e-36 Score=341.61 Aligned_cols=251 Identities=24% Similarity=0.330 Sum_probs=196.0
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||+|+. .+++.||+|++...........+.+..|+.++..++||+|+++++++.+++..|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688899999999999999965 468999999986432222334567888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKK---DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 999999999998543 3488999999999999999999999 9999999999999999999999999998754321
Q ss_pred CC-----------------------------------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCC
Q 001494 955 SS-----------------------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 999 (1067)
Q Consensus 955 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~ 999 (1067)
.. .....+||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 00 0113479999999999999999999999999999999999999
Q ss_pred CCCccccccccchhhhhhhhhccC--CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCC---HHHHHH
Q 001494 1000 PGDFISLISSSSLNLNIALDEILD--PRLPIPSHNVQEKLISFVEVAISCLDESPESRPT---MQKVSQ 1063 (1067)
Q Consensus 1000 p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt---~~evl~ 1063 (1067)
||....... ....+.. .....+... ....++.+++.+++ .+|.+|++ +.|+++
T Consensus 235 Pf~~~~~~~--------~~~~i~~~~~~~~~p~~~--~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 235 PFCSETPQE--------TYRKVMNWKETLVFPPEV--PISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCCHHH--------HHHHHHcCCCceecCCCC--CCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 986443211 1111111 111122111 11224778888876 49999985 566553
No 173
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=8.1e-35 Score=322.28 Aligned_cols=255 Identities=23% Similarity=0.437 Sum_probs=202.9
Q ss_pred hcCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 868 (1067)
.++|+..+.||+|+||.||+|... ++..||+|++.... .....+++.+|+.++++++||||+++++++.+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 357889999999999999999753 46789999987532 2334567899999999999999999999999999
Q ss_pred ceeEEEEeccCCCHHHHhcccC-------------------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCC
Q 001494 869 HSFIVYEYLEMGSLAMILSNDA-------------------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISS 929 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~ 929 (1067)
..++||||+++|+|.+++.... ....+++.+++.++.|++.|++|||++ +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 9999999999999999986321 123478889999999999999999999 999999999
Q ss_pred CceeeCCCCCeEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccc
Q 001494 930 KNVLLDFKNEARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISL 1006 (1067)
Q Consensus 930 ~Nill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~ 1006 (1067)
+||+++.++.++|+|||.++.+..... .......++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999976543321 1122334677999999988889999999999999999998 8888753322
Q ss_pred ccccchhhhhhhhhccCCCCC-CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1007 ISSSSLNLNIALDEILDPRLP-IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1007 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
. .....+...... .+.. ...++.+++.+||+.+|++|||+.|+++.|+
T Consensus 239 ~--------~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 239 E--------EVIYYVRDGNVLSCPDN----CPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred H--------HHHHHHhcCCCCCCCCC----CCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 1 111222222211 1111 2245899999999999999999999999886
No 174
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.2e-34 Score=318.49 Aligned_cols=253 Identities=26% Similarity=0.399 Sum_probs=199.3
Q ss_pred CCccCccccCCceeEEEEEEC----CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc----
Q 001494 798 FDDEHCIGKGGQGSVYKVELA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH---- 869 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 869 (1067)
|+..+.||+|+||.||+|... .+..||+|++...... ......+.+|++.++.++||||+++++++.+...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 567889999999999999754 2467999998754322 3345678999999999999999999998866554
Q ss_pred --eeEEEEeccCCCHHHHhcccC---ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEec
Q 001494 870 --SFIVYEYLEMGSLAMILSNDA---AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSD 944 (1067)
Q Consensus 870 --~~lv~E~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~D 944 (1067)
.++||||+++|+|..++.... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 799999999999998884322 234689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcc--ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhc
Q 001494 945 FGIAKFLKPDSSNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEI 1021 (1067)
Q Consensus 945 fG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1021 (1067)
||+++......... ....++..|+|||.+.+..++.++|||||||++|||++ |..||...... .....+
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--------~~~~~~ 228 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--------EIYDYL 228 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHH
Confidence 99998765432211 12234678999999988889999999999999999999 88887643321 111111
Q ss_pred cCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1022 LDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1022 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
... ....+.. ...++.+++.+||+.||++|||+.|+++.|+
T Consensus 229 ~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~ 270 (273)
T cd05035 229 RHGNRLKQPED----CLDELYDLMYSCWRADPKDRPTFTKLREVLE 270 (273)
T ss_pred HcCCCCCCCcC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 1122222 2335899999999999999999999999875
No 175
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=8.2e-35 Score=320.63 Aligned_cols=253 Identities=25% Similarity=0.440 Sum_probs=201.1
Q ss_pred cCCCccCccccCCceeEEEEEE------CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
.+|...++||+|+||.||+|+. .++..+|+|.+... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 4678889999999999999853 24567999987643 23345679999999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccCc------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC
Q 001494 870 SFIVYEYLEMGSLAMILSNDAA------------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK 937 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~ 937 (1067)
.++||||+++++|.+++..... ...+++..++.++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 9999999999999999864321 13578999999999999999999999 99999999999999999
Q ss_pred CCeEEeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhh
Q 001494 938 NEARVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNL 1014 (1067)
Q Consensus 938 ~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~ 1014 (1067)
+.+||+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------- 231 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT------- 231 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH-------
Confidence 99999999999765432211 122335678999999998889999999999999999998 89997532221
Q ss_pred hhhhhhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1015 NIALDEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1015 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+... ....+... ...+.+++.+||+.||++||++.||.+.|+
T Consensus 232 -~~~~~~~~~~~~~~~~~~----~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 232 -EAIECITQGRELERPRTC----PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -HHHHHHHcCccCCCCCCC----CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111111111 11112222 234889999999999999999999999886
No 176
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=8.2e-35 Score=323.50 Aligned_cols=253 Identities=25% Similarity=0.382 Sum_probs=197.4
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCc--EEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCcee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGE--IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 871 (1067)
++|++.+.||+|+||.||+|... ++. .+|+|.++... .....+.+.+|+++++++ +||||+++++++.+.+..|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 57889999999999999999764 333 47888876422 223346788999999999 7999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccC-------------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC
Q 001494 872 IVYEYLEMGSLAMILSNDA-------------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN 938 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~ 938 (1067)
+||||+++++|.+++.... ....+++..+..++.|++.|++|||++ +|+||||||+||+++.++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence 9999999999999986432 113588899999999999999999999 999999999999999999
Q ss_pred CeEEeccccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhh
Q 001494 939 EARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIA 1017 (1067)
Q Consensus 939 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 1017 (1067)
.+||+|||++....... .......+..|+|||++.+..++.++|||||||++|||++ |+.||....... .
T Consensus 157 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--------~ 227 (297)
T cd05089 157 ASKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--------L 227 (297)
T ss_pred eEEECCcCCCcccccee-ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------H
Confidence 99999999986432111 1111223557999999988889999999999999999997 999986433211 1
Q ss_pred hhhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1018 LDEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1018 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...+... ....+.. ...++.+++.+||+.+|.+|||+.++++.|+
T Consensus 228 ~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 228 YEKLPQGYRMEKPRN----CDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHhcCCCCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 1111211 2235889999999999999999999988864
No 177
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.4e-34 Score=315.88 Aligned_cols=251 Identities=25% Similarity=0.359 Sum_probs=201.9
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCC--ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPG--EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 872 (1067)
++|+..+.||+|++|.||+|.. .+++.||+|.+...... .....+.+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688899999999999999965 57899999998644322 12234568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
||||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY---GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 99999999999988543 3478899999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCc---cccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccC--CCCC
Q 001494 953 PDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD--PRLP 1027 (1067)
Q Consensus 953 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 1027 (1067)
..... .....++..|+|||.+.+..++.++||||+|+++|||++|+.||....... ....... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 227 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA--------AIFKIATQPTNPQ 227 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH--------HHHHHhccCCCCC
Confidence 32211 123467889999999999889999999999999999999999986432211 0011111 1111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.+.. ....+.+++.+||+.+|++|||+.|+++.
T Consensus 228 ~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 228 LPSH----VSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCcc----CCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 2222 22348899999999999999999999874
No 178
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-34 Score=317.13 Aligned_cols=253 Identities=24% Similarity=0.345 Sum_probs=190.2
Q ss_pred CccccCCceeEEEEEEC---CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEecc
Q 001494 802 HCIGKGGQGSVYKVELA---SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLE 878 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 878 (1067)
+.||+|+||.||+|... ++..+|+|++..... ......+.+|+.++++++||||+++++++.+....++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 46999999999999754 345799998865432 2334578899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCc--cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 879 MGSLAMILSNDAA--AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 879 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+|+|.+++..... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence 9999999864322 23456778889999999999999999 999999999999999999999999999975433221
Q ss_pred c--cccccccccccCccccccC-------CCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCC
Q 001494 957 N--WTELAGTYGYVAPELAYTM-------KVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRL 1026 (1067)
Q Consensus 957 ~--~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1067)
. .....+++.|+|||++.+. .++.++||||||+++|||++ |+.||......................+..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRL 235 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCcc
Confidence 1 1234567889999987642 35789999999999999996 999986443211110000000001111111
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
. . .....+.+++.+|| .+|++|||+.||++.|+
T Consensus 236 ~--~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 236 K--L----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred C--C----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1 0 11234788999999 58999999999999875
No 179
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.2e-36 Score=321.16 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=205.3
Q ss_pred HHhcCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCcee
Q 001494 793 RATNDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 793 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 871 (1067)
.....|++.++||+||.+.||++...+.+.||+|++.....+ .....-|..|+..+.++ .|.+||++++|-..++..|
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D-~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEAD-NQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcC-HHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 345679999999999999999999988899999988654433 34467899999999999 5999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+||||-+ -+|..+++.... ....| .++.+..|++.|+.+.|.+ ||||.|+||.|+|+- .|.+||+|||+|..+
T Consensus 437 mvmE~Gd-~DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 437 MVMECGD-IDLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAI 509 (677)
T ss_pred EEeeccc-ccHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence 9999875 599999965432 23334 6778899999999999999 999999999999985 689999999999988
Q ss_pred CCCCCc--cccccccccccCccccccCC-----------CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhh
Q 001494 952 KPDSSN--WTELAGTYGYVAPELAYTMK-----------VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIAL 1018 (1067)
Q Consensus 952 ~~~~~~--~~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 1018 (1067)
..+... ....+||+.||+||.+.... .++++||||+|||+|+|+.|+.||.... .....+
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-------n~~aKl 582 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-------NQIAKL 582 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-------HHHHHH
Confidence 766543 34578999999999876432 4578999999999999999999986433 234455
Q ss_pred hhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1019 DEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..+.+|.-.++.....+. .++.+++..||++||++||+..|+++
T Consensus 583 ~aI~~P~~~Iefp~~~~~-~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 583 HAITDPNHEIEFPDIPEN-DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HhhcCCCccccccCCCCc-hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 666666442222211111 12889999999999999999999986
No 180
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.6e-35 Score=323.92 Aligned_cols=255 Identities=24% Similarity=0.408 Sum_probs=202.1
Q ss_pred hcCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeC
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHA 867 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 867 (1067)
.++|+..+.||+|+||.||++... ....+|+|++.... ......++.+|+.+++++ +||||+++++++..+
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 356888899999999999998653 23679999987532 223346688999999999 899999999999999
Q ss_pred CceeEEEEeccCCCHHHHhccc-------------CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceee
Q 001494 868 QHSFIVYEYLEMGSLAMILSND-------------AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLL 934 (1067)
Q Consensus 868 ~~~~lv~E~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill 934 (1067)
+..++||||+++|+|..+++.. .....+++..++.++.|++.|++|||+. +|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEE
Confidence 9999999999999999998642 2234689999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccc
Q 001494 935 DFKNEARVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSS 1011 (1067)
Q Consensus 935 ~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~ 1011 (1067)
+.++.+|++|||.++.+...... .....++..|+|||++.+..++.++|||||||++||+++ |..||.......
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--- 242 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--- 242 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH---
Confidence 99999999999999876543211 122334678999999988889999999999999999998 889976432211
Q ss_pred hhhhhhhhhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1012 LNLNIALDEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1012 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....+... ....+.. ....+.+++.+||+.+|++|||+.|+++.|+
T Consensus 243 -----~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~eil~~l~ 289 (293)
T cd05053 243 -----LFKLLKEGYRMEKPQN----CTQELYHLMRDCWHEVPSQRPTFKQLVEDLD 289 (293)
T ss_pred -----HHHHHHcCCcCCCCCC----CCHHHHHHHHHHcccCcccCcCHHHHHHHHH
Confidence 11111111 1112222 2234889999999999999999999999875
No 181
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1e-35 Score=335.87 Aligned_cols=243 Identities=24% Similarity=0.277 Sum_probs=188.7
Q ss_pred cccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC---CCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 804 IGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI---RHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 804 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
||+|+||+||+|+. .+++.||+|++.............+..|..++... +||+|+++++++.+....|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999965 46899999998643211122233455566666554 699999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|.+++... ..+++..+..++.||++|++|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 81 GELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred ChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 9999888543 3588999999999999999999999 999999999999999999999999999976443333344
Q ss_pred cccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHH
Q 001494 960 ELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLI 1038 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1067)
..+||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+.......+... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~---~~~ 223 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--------QQMYRNIAFGKVRFPKNV---LSD 223 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--------HHHHHHHHcCCCCCCCcc---CCH
Confidence 56799999999988764 478999999999999999999999864322 111222222223333221 123
Q ss_pred HHHHHHHhccCCCCCCCC----CHHHHHH
Q 001494 1039 SFVEVAISCLDESPESRP----TMQKVSQ 1063 (1067)
Q Consensus 1039 ~l~~li~~cl~~dP~~Rp----t~~evl~ 1063 (1067)
++.+++.+||+.||++|| ++.++++
T Consensus 224 ~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 224 EGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 478999999999999998 4566554
No 182
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.4e-34 Score=320.62 Aligned_cols=254 Identities=26% Similarity=0.413 Sum_probs=199.5
Q ss_pred CCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
+|++.+.||+|+||.||+|... ....+|+|.+.... .....+++..|+.+++.++||||+++++++...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 4778899999999999998643 23568888886432 223346788999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHHhcccC---------------------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCC
Q 001494 871 FIVYEYLEMGSLAMILSNDA---------------------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISS 929 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~ 929 (1067)
++||||+++++|.+++.... ....+++.++..++.|++.|++|||++ +|+||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhh
Confidence 99999999999999885321 123578999999999999999999999 999999999
Q ss_pred CceeeCCCCCeEEeccccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccc
Q 001494 930 KNVLLDFKNEARVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISL 1006 (1067)
Q Consensus 930 ~Nill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~ 1006 (1067)
+||++++++.+||+|||+++....... ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 999999999999999999986543322 1122345678999999888889999999999999999998 9999864332
Q ss_pred ccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1007 ISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1007 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.. ......... ....+.. ...++.+++.+||+.+|++||++.|+++.|+
T Consensus 236 ~~-----~~~~~~~~~--~~~~~~~----~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~ 284 (290)
T cd05045 236 ER-----LFNLLKTGY--RMERPEN----CSEEMYNLMLTCWKQEPDKRPTFADISKELE 284 (290)
T ss_pred HH-----HHHHHhCCC--CCCCCCC----CCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 11 011111111 1111211 2235889999999999999999999999885
No 183
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=326.63 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=201.8
Q ss_pred CccCccccCCceeEEEEEEC--CCc--EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 799 DDEHCIGKGGQGSVYKVELA--SGE--IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 799 ~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
...++||+|.||+|++|.+. +|+ .||||.++...... ...+|++|+.+|.+++|||++++||+..+ ....+||
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 44578999999999999654 454 58999998654433 46789999999999999999999999987 7788999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|+++.|+|.+.++. .....+-......++.|||.|++||.++ +.||||+..+|+++-....|||+|||+.+.++..
T Consensus 190 ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 99999999999976 5667788888999999999999999999 9999999999999999999999999999988765
Q ss_pred CCcccc---ccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhcc-CCCCCCC
Q 001494 955 SSNWTE---LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEIL-DPRLPIP 1029 (1067)
Q Consensus 955 ~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1029 (1067)
...+.. ..-...|+|||.+....++.++|||+|||++|||+| |..||-+.... .....+- ..+++-|
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--------qIL~~iD~~erLpRP 337 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--------QILKNIDAGERLPRP 337 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--------HHHHhccccccCCCC
Confidence 544321 122467999999999999999999999999999998 67886544321 1122221 1233333
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
..+ .+.+++++..||..+|++|||+..+.+.
T Consensus 338 k~c----sedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 338 KYC----SEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred CCC----hHHHHHHHHHhccCCccccccHHHHHHh
Confidence 333 3459999999999999999999999754
No 184
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=7.8e-35 Score=324.40 Aligned_cols=254 Identities=24% Similarity=0.381 Sum_probs=197.7
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCc--EEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCce
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGE--IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 870 (1067)
.++|++.+.||+|+||.||+|+.+ ++. .+|+|.+.... .....+.+.+|++++.++ +||||+++++++.+++..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 357888999999999999999764 454 45777765322 223456788999999999 899999999999999999
Q ss_pred eEEEEeccCCCHHHHhcccCc-------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC
Q 001494 871 FIVYEYLEMGSLAMILSNDAA-------------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK 937 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~ 937 (1067)
|+||||+++++|.+++..... ...+++.+++.++.|++.|++|||++ +|+||||||+||+++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 999999999999999864321 23578999999999999999999999 99999999999999999
Q ss_pred CCeEEeccccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhh
Q 001494 938 NEARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNI 1016 (1067)
Q Consensus 938 ~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 1016 (1067)
+.+||+|||+++...... ......++..|+|||.+.+..++.++|||||||++|||+| |..||.......
T Consensus 161 ~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------- 231 (303)
T cd05088 161 YVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------- 231 (303)
T ss_pred CcEEeCccccCcccchhh-hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--------
Confidence 999999999986432111 1112234667999999988889999999999999999998 999986433211
Q ss_pred hhhhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1017 ALDEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1017 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....+... ....+.. ....+.+++.+||+.+|++||++.++++.++
T Consensus 232 ~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 232 LYEKLPQGYRLEKPLN----CDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred HHHHHhcCCcCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 1111111 2235889999999999999999999998764
No 185
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.6e-34 Score=314.74 Aligned_cols=250 Identities=25% Similarity=0.441 Sum_probs=200.1
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
++|...++||+|+||.||+|....+..||+|++.... ...+.+.+|++++++++|||++++++++. .+..++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTE 80 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEE
Confidence 4588889999999999999988777789999876432 12467889999999999999999999875 456899999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.++......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 81 FMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred cCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 999999999996432 34578999999999999999999999 99999999999999999999999999998764332
Q ss_pred Cc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCCCcc
Q 001494 956 SN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSHN 1032 (1067)
Q Consensus 956 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1032 (1067)
.. .....++..|+|||...+..++.++|||||||++|||++ |+.||...... .....+... ....+.
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~-- 226 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--------EVLEQVERGYRMPCPQ-- 226 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCCc--
Confidence 21 122345678999999988889999999999999999999 89998643221 111111111 111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+.+++.+||+.+|++||++++++++|+
T Consensus 227 --~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 227 --GCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred --ccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 23345899999999999999999999999986
No 186
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.3e-34 Score=316.74 Aligned_cols=252 Identities=27% Similarity=0.454 Sum_probs=201.0
Q ss_pred cCCCccCccccCCceeEEEEEEC----CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCcee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 871 (1067)
.+|+..+.||+|+||.||+|+.. .+..+|+|.+..... ....+.+..|+.++++++||||+++++++.+++..|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 46888899999999999999653 234799999865432 233567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+||||+++++|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++...
T Consensus 82 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 82 IVTEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 999999999999999643 24579999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcc---ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CC
Q 001494 952 KPDSSNW---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RL 1026 (1067)
Q Consensus 952 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1026 (1067)
....... ....++..|+|||.+.+..++.++||||||+++||+++ |+.||....... ....+... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--------~~~~~~~~~~~ 228 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--------VIKAIEEGYRL 228 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--------HHHHHhCCCcC
Confidence 5432211 11223568999999998889999999999999999886 999986433211 11111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
+.+. ..+..+.+++.+|++.+|.+||++.++++.|+
T Consensus 229 ~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 264 (267)
T cd05066 229 PAPM----DCPAALHQLMLDCWQKDRNERPKFEQIVSILD 264 (267)
T ss_pred CCCC----CCCHHHHHHHHHHcccCchhCCCHHHHHHHHH
Confidence 1111 12335889999999999999999999999875
No 187
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.6e-35 Score=341.22 Aligned_cols=256 Identities=21% Similarity=0.276 Sum_probs=189.5
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC------
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA------ 867 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 867 (1067)
..+|+..++||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++|||||++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 35799999999999999999965 478999999885321 2234799999999999999999887432
Q ss_pred --CceeEEEEeccCCCHHHHhcc-cCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC-CeEEe
Q 001494 868 --QHSFIVYEYLEMGSLAMILSN-DAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN-EARVS 943 (1067)
Q Consensus 868 --~~~~lv~E~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~-~~kl~ 943 (1067)
...++||||+++ ++.+++.. ......+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 246799999986 56555532 23345689999999999999999999999 999999999999999765 69999
Q ss_pred ccccceecCCCCCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh-------h
Q 001494 944 DFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL-------N 1015 (1067)
Q Consensus 944 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~-------~ 1015 (1067)
|||+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||............. .
T Consensus 214 DFGla~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 214 DFGSAKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred ccccchhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 999998765332 22345789999999987664 68999999999999999999999987543211100000 0
Q ss_pred hhhhhccCC---CCCCCC---cch-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1016 IALDEILDP---RLPIPS---HNV-----QEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1016 ~~~~~~~~~---~~~~~~---~~~-----~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..... ..+ ....+. ... .....++.+++.+||+.||.+|||+.|+++
T Consensus 293 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 293 DQLKE-MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHH-hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00000 000 000000 000 011235889999999999999999999875
No 188
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.5e-34 Score=314.32 Aligned_cols=253 Identities=24% Similarity=0.331 Sum_probs=206.9
Q ss_pred CCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|+||.||.++ ..+++.+|+|++....... ...+++.+|++++++++|+||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 47888999999999999985 4568899999986543222 335678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 80 YANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred ecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 999999999986533 34588999999999999999999999 99999999999999999999999999998765544
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
.......+++.|+|||...+..++.++||||+|+++|||++|+.||+.... ......+......... ..
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~---~~ 224 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--------LNLVVKIVQGNYTPVV---SV 224 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCCc---cc
Confidence 334456789999999999888889999999999999999999999864322 1122222222222111 12
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
...++.+++.+||+.+|++||++.++++..
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 225 YSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 234588999999999999999999999864
No 189
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.8e-35 Score=333.12 Aligned_cols=259 Identities=21% Similarity=0.307 Sum_probs=195.8
Q ss_pred HhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC----
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ---- 868 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 868 (1067)
..++|+..+.||+|+||.||++.. .+|+.||+|++...... ....+++.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 347899999999999999999965 56899999998754322 233567789999999999999999999986543
Q ss_pred --ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 869 --HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 869 --~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
..|+||||+++ ++...+. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 47999999976 4555542 2378888999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchh-------------
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN------------- 1013 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~------------- 1013 (1067)
+++..... .......||+.|+|||.+.+..++.++||||+||++|||++|+.||............
T Consensus 169 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 169 LARTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred CccccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 99765432 2234457899999999999989999999999999999999999998654321100000
Q ss_pred -hhhhhhhccCC--C------------CCCCC--cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1014 -LNIALDEILDP--R------------LPIPS--HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1014 -~~~~~~~~~~~--~------------~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
........... . +..+. .........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000000 0 00000 000111235789999999999999999999986
No 190
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-34 Score=323.39 Aligned_cols=255 Identities=24% Similarity=0.394 Sum_probs=201.5
Q ss_pred hcCCCccCccccCCceeEEEEEE--------CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEe
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL--------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCS 865 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 865 (1067)
..+|.+.+.||+|+||.||+|+. .++..||+|.+.... .....+++.+|+.+++.+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 35688899999999999999863 134579999986432 223356788999999999 8999999999999
Q ss_pred eCCceeEEEEeccCCCHHHHhcccCc-------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCce
Q 001494 866 HAQHSFIVYEYLEMGSLAMILSNDAA-------------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNV 932 (1067)
Q Consensus 866 ~~~~~~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Ni 932 (1067)
..+..|+||||+++|+|.+++..... ...+++.++..++.|++.|++|||++ +|+||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 99999999999999999999864321 23578889999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccc
Q 001494 933 LLDFKNEARVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISS 1009 (1067)
Q Consensus 933 ll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~ 1009 (1067)
+++.++.+||+|||.++........ .....+++.|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-- 246 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 246 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--
Confidence 9999999999999999876543221 122345678999999988889999999999999999998 78887543321
Q ss_pred cchhhhhhhhhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1010 SSLNLNIALDEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1010 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+... ....+. .....+.+++.+||+.+|++|||+.|+++.|+
T Consensus 247 ------~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~ 294 (304)
T cd05101 247 ------ELFKLLKEGHRMDKPA----NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLD 294 (304)
T ss_pred ------HHHHHHHcCCcCCCCC----CCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 111111111 111111 12335889999999999999999999999874
No 191
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=8.3e-36 Score=325.00 Aligned_cols=254 Identities=30% Similarity=0.452 Sum_probs=200.6
Q ss_pred CCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|+.++.||+|+||+||+++.. +++.||+|++....... .......+|+.++++++||||+++++++.+....++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-EEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-cccchhhhhhhccccccccccccccccccccccccccccc
Confidence 567899999999999999765 56789999998653222 1222345699999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++++|.+++. ....+++..+..++.|+++||+|||++ +|+||||||+||+++.++.++|+|||.+........
T Consensus 80 ~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 80 CPGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp ETTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred ccccccccccc---ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 99999999996 334579999999999999999999999 999999999999999999999999999987543444
Q ss_pred ccccccccccccCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 957 NWTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
......++..|+|||++. +..++.++||||+|+++|+|++|..||........................ . ....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~ 228 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS-Q----QSRE 228 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT-T----SHTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc-c----ccch
Confidence 555677899999999988 788999999999999999999999998754111111111111100110000 0 0000
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...++.+++.+||+.||++||++.++++
T Consensus 229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 229 KSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp SHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1146899999999999999999999986
No 192
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.6e-34 Score=321.59 Aligned_cols=255 Identities=25% Similarity=0.426 Sum_probs=201.5
Q ss_pred cCCCccCccccCCceeEEEEEE------CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCC
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQ 868 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 868 (1067)
++|...+.||+|+||.||++.. .++..||+|++.... .....+.+.+|+.+++++ +||||+++++++...+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 5688999999999999999863 235579999987542 223346789999999999 7999999999999999
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIA 948 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a 948 (1067)
..|+||||+++|+|.++++... ...+++.++..++.|++.|++|||++ +|+|+||||+||+++.++.++++|||++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence 9999999999999999986432 23489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCC
Q 001494 949 KFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPR 1025 (1067)
Q Consensus 949 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1067)
+........ .....+++.|+|||.+.+..++.++||||+||++|||++ |+.||........ ......... .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~----~~~~~~~~~--~ 262 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK----FYKLIKEGY--R 262 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH----HHHHHHcCC--c
Confidence 865433211 122345678999999988889999999999999999998 9999764332110 011111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1026 LPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1026 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...+.. ...++.+++.+|++.+|++|||+.|+++.|+
T Consensus 263 ~~~~~~----~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~ 299 (302)
T cd05055 263 MAQPEH----APAEIYDIMKTCWDADPLKRPTFKQIVQLIG 299 (302)
T ss_pred CCCCCC----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 111111 1235899999999999999999999999885
No 193
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.2e-34 Score=315.03 Aligned_cols=249 Identities=29% Similarity=0.454 Sum_probs=203.7
Q ss_pred cCCCccCccccCCceeEEEEEECC-CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..++||+|+||.||+|.... ++.||+|.+.... ..+++.+|++++++++||||+++++++.+....|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 578899999999999999997664 7899999986431 1578999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++......
T Consensus 78 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 78 EYCGAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred ecCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 999999999998532 34689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........++..|+|||++.+..++.++||||||+++|||++|+.||........ .........+....+ .
T Consensus 153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~----~ 223 (256)
T cd06612 153 MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-----IFMIPNKPPPTLSDP----E 223 (256)
T ss_pred ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-----hhhhccCCCCCCCch----h
Confidence 3333445678899999999888899999999999999999999999874332111 000011111111111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.....+.+++.+||+.+|++|||+.|+++
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 22345889999999999999999999986
No 194
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.7e-34 Score=314.88 Aligned_cols=252 Identities=27% Similarity=0.495 Sum_probs=204.4
Q ss_pred hcCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.++|.+.++||+|+||.||+|..++++.||||.+..... ..+++.+|+.++++++|||++++++++......++||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 367889999999999999999888888999999874322 2467889999999999999999999999989999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++.... ...+++.++..++.+++.|++|||++ +++||||||+||+++.++.+|++|||.++.....
T Consensus 81 e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 81 EYMSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred eccCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 9999999999996532 34589999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCCCc
Q 001494 955 SSN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSH 1031 (1067)
Q Consensus 955 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1031 (1067)
... .....++..|+|||.+.+..++.++||||+||++||+++ |+.||..... ......+... ....+..
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 228 (261)
T cd05034 157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--------REVLEQVERGYRMPRPPN 228 (261)
T ss_pred hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCCC
Confidence 111 112234568999999998889999999999999999998 9999854321 1111111111 1111211
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
. ..++.+++.+|++.+|++||++.++.+.|+
T Consensus 229 ~----~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 229 C----PEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred C----CHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 1 335899999999999999999999999886
No 195
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.1e-34 Score=328.65 Aligned_cols=256 Identities=23% Similarity=0.423 Sum_probs=198.1
Q ss_pred cCCCccCccccCCceeEEEEEE------CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeC-
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHA- 867 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~- 867 (1067)
++|++.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++.++ +||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 5789999999999999999853 4578899999975432 22346788999999999 689999999988654
Q ss_pred CceeEEEEeccCCCHHHHhcccCc--------------------------------------------------------
Q 001494 868 QHSFIVYEYLEMGSLAMILSNDAA-------------------------------------------------------- 891 (1067)
Q Consensus 868 ~~~~lv~E~~~~g~L~~~l~~~~~-------------------------------------------------------- 891 (1067)
...++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 467899999999999998854210
Q ss_pred --------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC--ccccc
Q 001494 892 --------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS--NWTEL 961 (1067)
Q Consensus 892 --------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~--~~~~~ 961 (1067)
...+++.++.+++.|+++|++|||++ +|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 12368888999999999999999999 999999999999999999999999999986543222 11223
Q ss_pred cccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHH
Q 001494 962 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISF 1040 (1067)
Q Consensus 962 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1040 (1067)
.+++.|+|||.+.+..++.++||||||+++|||++ |..||........ ....... ......+... ..++
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~----~~~~~~~--~~~~~~~~~~----~~~~ 311 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKE--GTRMRAPDYT----TPEM 311 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH----HHHHHhc--cCCCCCCCCC----CHHH
Confidence 45678999999988889999999999999999997 8999864322110 0011111 1111112111 2248
Q ss_pred HHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1041 VEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1041 ~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+++..||+.+|++|||+.|+++.|+
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~l~ 337 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEHLG 337 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHH
Confidence 89999999999999999999999875
No 196
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.9e-35 Score=320.08 Aligned_cols=252 Identities=27% Similarity=0.409 Sum_probs=198.1
Q ss_pred HhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeC----
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHA---- 867 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~---- 867 (1067)
+...|+..+.||+|+||.||+|.. .+++.||+|++..... ...++..|+.+++++ +||||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc----cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 456788889999999999999965 4688999999864321 235678899999998 799999999998653
Q ss_pred --CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecc
Q 001494 868 --QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDF 945 (1067)
Q Consensus 868 --~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~Df 945 (1067)
...|+||||+++++|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||++++++.++|+||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 45899999999999999986432 34588999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhh
Q 001494 946 GIAKFLKPDSSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDE 1020 (1067)
Q Consensus 946 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1020 (1067)
|+++.............|++.|+|||++. +..++.++||||+||++|||++|+.||+......... ....
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~-----~~~~ 230 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-----LIPR 230 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-----HHhc
Confidence 99987654433445567899999999876 3357889999999999999999999986433211110 0001
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1021 ILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...... ... ....++.+++.+||+.+|.+|||+.|+++
T Consensus 231 ~~~~~~--~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 NPAPRL--KSK---KWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCCCC--CCC---CcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 101111 111 12235889999999999999999999975
No 197
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.1e-34 Score=313.24 Aligned_cols=245 Identities=27% Similarity=0.433 Sum_probs=194.0
Q ss_pred CccccCCceeEEEEEEC-C---CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEec
Q 001494 802 HCIGKGGQGSVYKVELA-S---GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYL 877 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 877 (1067)
++||+|+||.||+|... . +..||+|.+...... ...+++..|+++++.++||||+++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999998543 2 368999998754322 34577899999999999999999999876 45689999999
Q ss_pred cCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCc
Q 001494 878 EMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSN 957 (1067)
Q Consensus 878 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 957 (1067)
++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++........
T Consensus 78 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 78 PLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999996433 588999999999999999999999 9999999999999999999999999999876543322
Q ss_pred ccc---ccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 958 WTE---LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 958 ~~~---~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
... ..++..|+|||.+.+..++.++||||||+++|||++ |+.||+...... ........ .....+..
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~-----~~~~~~~~--~~~~~~~~-- 222 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE-----VIAMLESG--ERLPRPEE-- 222 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH-----HHHHHHcC--CcCCCCCC--
Confidence 211 123467999999988889999999999999999998 999986443211 01111111 11112222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...++.+++.+||+.+|++||++.++++.|+
T Consensus 223 --~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~ 253 (257)
T cd05060 223 --CPQEIYSIMLSCWKYRPEDRPTFSELESTFR 253 (257)
T ss_pred --CCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 2235889999999999999999999999885
No 198
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.7e-34 Score=318.85 Aligned_cols=256 Identities=26% Similarity=0.393 Sum_probs=197.0
Q ss_pred CCccCccccCCceeEEEEEE-----CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--Cce
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-----ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHS 870 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 870 (1067)
|+..+.||+|+||+||++.. .+++.||+|.+..... ....+.+.+|++++++++||||+++++++... ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 37889999999999988542 4678899999875422 22356788999999999999999999988654 357
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++||||+++++|.+++.. ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 899999999999999854 2489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---cccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccc------hhhhhhhhhc
Q 001494 951 LKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSS------LNLNIALDEI 1021 (1067)
Q Consensus 951 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~------~~~~~~~~~~ 1021 (1067)
....... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+.......... ........+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 6533221 112335667999999988889999999999999999999999975432110000 0000011111
Q ss_pred cCCC--CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1022 LDPR--LPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1022 ~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+.. .+.+.. ...++.+++.+||+.+|++|||++++++.|+
T Consensus 237 ~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~ 279 (283)
T cd05080 237 LERGMRLPCPKN----CPQEVYILMKNCWETEAKFRPTFRSLIPILK 279 (283)
T ss_pred hhcCCCCCCCCC----CCHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 1111 111111 2245899999999999999999999999885
No 199
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.7e-34 Score=318.74 Aligned_cols=251 Identities=24% Similarity=0.401 Sum_probs=200.1
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
+.|++.++||+|+||.||+|+.. +++.||+|.+... .....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 56888999999999999999765 5889999998643 3334577889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++++++..++... ...+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 89 EFCPGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred ecCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 999999998877432 23588999999999999999999999 9999999999999999999999999998765443
Q ss_pred CCccccccccccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCC
Q 001494 955 SSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIP 1029 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1067)
........+++.|+|||++. ...++.++|||||||++|||++|+.||....... ..........+....+
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~ 238 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-----VLLKIAKSEPPTLSQP 238 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-----HHHHHhcCCCccCCCC
Confidence 33344566888999999875 3446889999999999999999999975432211 0011111111111112
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. ....++.+++.+||+.+|++||++.|+++
T Consensus 239 ~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 239 S----KWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred c----ccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1 22235889999999999999999999976
No 200
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.8e-34 Score=314.69 Aligned_cols=248 Identities=30% Similarity=0.470 Sum_probs=202.4
Q ss_pred CccccCCceeEEEEEECC----CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEec
Q 001494 802 HCIGKGGQGSVYKVELAS----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYL 877 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 877 (1067)
+.||+|+||.||+|.... +..||+|++....... ..+.+.+|++.++.++|+|++++++++......++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 469999999999997653 7889999987653322 3578899999999999999999999999999999999999
Q ss_pred cCCCHHHHhcccCc------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 878 EMGSLAMILSNDAA------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 878 ~~g~L~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
++++|.+++..... ...+++.++..++.|++.|++|||++ +++||||||+||+++.++.+|++|||.+...
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccc
Confidence 99999999965421 35689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC--CccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccC-CCCC
Q 001494 952 KPDS--SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILD-PRLP 1027 (1067)
Q Consensus 952 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1027 (1067)
.... .......+++.|+|||.+....++.++||||+|+++|||++ |..||+..... .....+.. ....
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~ 227 (262)
T cd00192 156 YDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--------EVLEYLRKGYRLP 227 (262)
T ss_pred ccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCC
Confidence 5432 22234557889999999988889999999999999999999 69998754321 11111111 1112
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+.. ...++.+++.+||+.+|++|||+.|+++.|+
T Consensus 228 ~~~~----~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 KPEY----CPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCcc----CChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 2222 2345889999999999999999999999875
No 201
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-34 Score=323.75 Aligned_cols=254 Identities=24% Similarity=0.392 Sum_probs=199.8
Q ss_pred cCCCccCccccCCceeEEEEEEC--------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA--------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH 866 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 866 (1067)
++|.+.+.||+|+||.||+|+.. ++..||+|.+..... .....++..|+.+++.+ +||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC--hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 56899999999999999998642 235699999875422 22346788899999999 79999999999999
Q ss_pred CCceeEEEEeccCCCHHHHhcccCc-------------cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCcee
Q 001494 867 AQHSFIVYEYLEMGSLAMILSNDAA-------------AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVL 933 (1067)
Q Consensus 867 ~~~~~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nil 933 (1067)
.+..|+||||+++|+|.+++..... ...+++.++++++.|++.|++|||+. +++||||||+||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 172 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 172 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheE
Confidence 9999999999999999999965321 23588999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccc
Q 001494 934 LDFKNEARVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSS 1010 (1067)
Q Consensus 934 l~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~ 1010 (1067)
++.++.+||+|||.++........ .....+++.|+|||.+.+..++.++||||+||++|||++ |+.||......
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~--- 249 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--- 249 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH---
Confidence 999999999999999765432211 112234568999999988889999999999999999998 88887543221
Q ss_pred chhhhhhhhhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1011 SLNLNIALDEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1011 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+... ....+.. ...++.+++.+||+.+|++|||+.++++.|+
T Consensus 250 -----~~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~evl~~l~ 297 (307)
T cd05098 250 -----ELFKLLKEGHRMDKPSN----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 297 (307)
T ss_pred -----HHHHHHHcCCCCCCCCc----CCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 111111111 1112222 2235889999999999999999999999874
No 202
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.8e-34 Score=314.43 Aligned_cols=240 Identities=22% Similarity=0.417 Sum_probs=188.1
Q ss_pred CccccCCceeEEEEEECC-------------CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC
Q 001494 802 HCIGKGGQGSVYKVELAS-------------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ 868 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 868 (1067)
+.||+|+||.||+|...+ ...||+|.+... .....+.+.+|+.+++.++||||+++++++..+.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 468999999999997532 235888887543 2233467888999999999999999999999999
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCC-------eE
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNE-------AR 941 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~-------~k 941 (1067)
..++||||+++|++..++... ...+++..+.+++.||++|++|||++ +|+||||||+||+++.++. ++
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCEEEEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeE
Confidence 999999999999999888532 24588999999999999999999999 9999999999999987664 89
Q ss_pred EeccccceecCCCCCccccccccccccCccccc-cCCCCccchhHHHHHHHHHHH-hCCCCCCccccccccchhhhhhhh
Q 001494 942 VSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVI-KGKHPGDFISLISSSSLNLNIALD 1019 (1067)
Q Consensus 942 l~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~ell-tg~~p~~~~~~~~~~~~~~~~~~~ 1019 (1067)
++|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|+.|+........ .
T Consensus 153 l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~---------~ 219 (262)
T cd05077 153 LSDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK---------E 219 (262)
T ss_pred eCCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH---------H
Confidence 9999998755322 2345788899999886 456899999999999999998 58888753321110 0
Q ss_pred hccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1020 EILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
............. ..++.+++.+||+.||++||++.++++.+.
T Consensus 220 ~~~~~~~~~~~~~----~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 220 RFYEGQCMLVTPS----CKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHhcCccCCCCC----hHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 1111111111111 234889999999999999999999998863
No 203
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2e-34 Score=315.65 Aligned_cols=255 Identities=25% Similarity=0.359 Sum_probs=198.0
Q ss_pred HhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeE
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 872 (1067)
+++.+.....||+|+||.||+|+. .+++.||+|.+... .....+.+.+|++++++++||||+++++++..++..++
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 345566667899999999999974 46788999988643 22345678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC-CCCeEEeccccceec
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF-KNEARVSDFGIAKFL 951 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~-~~~~kl~DfG~a~~~ 951 (1067)
||||+++++|.+++.........++..+..++.|++.|++|||++ +|+||||||+||+++. ++.++|+|||.+...
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 999999999999986432211127788889999999999999999 9999999999999986 678999999999876
Q ss_pred CCCCCccccccccccccCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCC
Q 001494 952 KPDSSNWTELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIP 1029 (1067)
Q Consensus 952 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1067)
...........+++.|+|||++.+.. ++.++||||+|+++|||++|+.||........ ..............+
T Consensus 160 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~ 234 (268)
T cd06624 160 AGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-----AMFKVGMFKIHPEIP 234 (268)
T ss_pred ccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-----hHhhhhhhccCCCCC
Confidence 54333334456889999999886643 78899999999999999999999864321100 000000111111122
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.. ...++.+++.+||+.+|++|||+.|+++
T Consensus 235 ~~----~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 235 ES----LSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cc----cCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 22 2234889999999999999999999986
No 204
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-34 Score=320.77 Aligned_cols=249 Identities=27% Similarity=0.461 Sum_probs=202.8
Q ss_pred cCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|+..+.||.|+||.||+|. ..+++.||+|.+..... ...+.+.+|+.+++.++|||++++++++...+..|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 468899999999999999985 46789999999865322 22467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++.. ..+++.++..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 96 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 96 EYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EecCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 99999999998853 2478999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........+++.|+|||.+.+..++.++|||||||++|+|++|+.||......... ........+....+..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~--- 240 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-----YLIATNGTPELQNPEK--- 240 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHHHhcCCcccCCccc---
Confidence 43334457889999999998888999999999999999999999998654321110 0111111111111221
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+.+++.+||..||++||++.++++
T Consensus 241 -~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 241 -LSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -CCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 2234889999999999999999999975
No 205
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=5.9e-35 Score=335.17 Aligned_cols=259 Identities=24% Similarity=0.318 Sum_probs=196.5
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-----ce
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ-----HS 870 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 870 (1067)
+|+..++||+|+||.||+|.. .+|+.||+|++..... .....+++.+|+++++.++||||+++++++...+ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc-chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478889999999999999975 5789999999864322 2223467889999999999999999999998776 78
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
|+||||+. +++...+.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEEeeccc-cCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 99999997 567776643 23589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC-CccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh--------------
Q 001494 951 LKPDS-SNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL-------------- 1014 (1067)
Q Consensus 951 ~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~-------------- 1014 (1067)
..... .......+++.|+|||.+.+. .++.++||||+||++|||++|+.||+............
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 54332 223345678999999998774 47899999999999999999999987543221100000
Q ss_pred -hhhhhhccCCCCCCCC-----cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1015 -NIALDEILDPRLPIPS-----HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1015 -~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
......+.......+. ....+...++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 0000001000000000 000112345889999999999999999999986
No 206
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.6e-35 Score=327.49 Aligned_cols=196 Identities=27% Similarity=0.389 Sum_probs=171.4
Q ss_pred cCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-C-----CeeeeeeEEEeeCC
Q 001494 796 NDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-H-----RNIVKFYGFCSHAQ 868 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~ 868 (1067)
.+|.+.+.||+|+||.|.+| +..+++.||||+++. ...+..+-..|+.++..++ | -|+|+++++|...+
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN----~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN----KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeecc----ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 38999999999999999999 466899999999974 4455677788999999996 4 48999999999999
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC--CeEEeccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN--EARVSDFG 946 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~--~~kl~DfG 946 (1067)
+.|||+|.+. -+|+++++.... ..++...+..|+.||+.||.+||+. +|||+||||+|||+...+ .+||+|||
T Consensus 262 HlciVfELL~-~NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFG 336 (586)
T KOG0667|consen 262 HLCIVFELLS-TNLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFG 336 (586)
T ss_pred ceeeeehhhh-hhHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecc
Confidence 9999999986 599999976554 3489999999999999999999999 999999999999997654 59999999
Q ss_pred cceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDF 1003 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~ 1003 (1067)
.|+....... ....+.-|+|||++.+.+|+.+.||||||||++||++|.+-|.+
T Consensus 337 SSc~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 337 SSCFESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred cccccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 9987654332 55678889999999999999999999999999999999766643
No 207
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-36 Score=302.19 Aligned_cols=244 Identities=25% Similarity=0.299 Sum_probs=210.4
Q ss_pred hcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
.++|+..++||+|.||.|-.++ ..+++.+|+|++++...-.......-+.|-++++..+||.+..+--.|+..++.|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 4679999999999999999985 568999999999877666655566678899999999999999999899999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+.||.|...+++.+ .+++....-+-..|..||.|||++ +||+||+|.+|.|+|.+|++||+|||+++.--.
T Consensus 247 MeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccc
Confidence 99999999998886543 377788888899999999999999 999999999999999999999999999987666
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.+.....++|||.|.|||++....|+.++|.|.+||++|||++|+.||...+. ...+.-++-..+.+|....
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--------~kLFeLIl~ed~kFPr~ls 392 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--------EKLFELILMEDLKFPRTLS 392 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch--------hHHHHHHHhhhccCCccCC
Confidence 66777889999999999999999999999999999999999999999853332 2333444445566666555
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC
Q 001494 1034 QEKLISFVEVAISCLDESPESRP 1056 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rp 1056 (1067)
++ ...++...+.+||.+|.
T Consensus 393 ~e----AktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 393 PE----AKTLLSGLLKKDPKKRL 411 (516)
T ss_pred HH----HHHHHHHHhhcChHhhc
Confidence 55 78899999999999995
No 208
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.5e-34 Score=318.82 Aligned_cols=256 Identities=23% Similarity=0.356 Sum_probs=203.2
Q ss_pred hcCCCccCccccCCceeEEEEEECC-----CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee-CC
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELAS-----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH-AQ 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 868 (1067)
.++|+..+.||+|+||.||+|.... +..||+|++... ......+.+.+|+.++++++||||+++++++.+ ..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 4678889999999999999997665 688999988643 233445778899999999999999999998766 46
Q ss_pred ceeEEEEeccCCCHHHHhcccCcc-----CCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEe
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAA-----EDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVS 943 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~ 943 (1067)
..++++||+++++|.+++...... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEEC
Confidence 789999999999999998643322 4689999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhh
Q 001494 944 DFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDE 1020 (1067)
Q Consensus 944 DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1020 (1067)
|||+++.+.+.... .....++..|+|||++.+..++.++|||||||++||+++ |+.||....... .......
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~ 234 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-----MAAYLKD 234 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-----HHHHHHc
Confidence 99999866433221 122345678999999988889999999999999999999 999986543211 1111111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1021 ILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
. .....+. ....++.+++.+||+.+|++|||+.++++.|+
T Consensus 235 ~--~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 235 G--YRLAQPI----NCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred C--CCCCCCC----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1 1111111 12235889999999999999999999999875
No 209
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.3e-34 Score=325.27 Aligned_cols=194 Identities=22% Similarity=0.377 Sum_probs=159.2
Q ss_pred cCccccCCceeEEEEEEC---CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee--CCceeEEEE
Q 001494 801 EHCIGKGGQGSVYKVELA---SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH--AQHSFIVYE 875 (1067)
Q Consensus 801 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E 875 (1067)
+++||+|+||+||+|+.. +++.||+|++..... ...+.+|++++++++||||+++++++.. ....|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 468999999999999754 567899999864321 2456789999999999999999998854 456899999
Q ss_pred eccCCCHHHHhcccC------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceee----CCCCCeEEecc
Q 001494 876 YLEMGSLAMILSNDA------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLL----DFKNEARVSDF 945 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill----~~~~~~kl~Df 945 (1067)
|+++ ++.+++.... ....+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9865 7777764221 123588899999999999999999999 99999999999999 45678999999
Q ss_pred ccceecCCCCC---ccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCc
Q 001494 946 GIAKFLKPDSS---NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDF 1003 (1067)
Q Consensus 946 G~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~ 1003 (1067)
|+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 99987653321 23346789999999988764 589999999999999999999999863
No 210
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.2e-34 Score=317.74 Aligned_cols=249 Identities=24% Similarity=0.382 Sum_probs=197.9
Q ss_pred CCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|++.+.||+|+||.||+|... ++..+|+|.+... .....+.+..|+++++.++|||++++++++..++..|+||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 566788999999999999765 5788899988543 223456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
++++++..++.. ...++++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++........
T Consensus 84 ~~~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 84 CAGGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred cCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence 999999888753 234589999999999999999999999 999999999999999999999999999976544333
Q ss_pred ccccccccccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCc
Q 001494 957 NWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSH 1031 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1067)
......+++.|+|||++. +..++.++||||+||++|||++|+.||........ .........+....+..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 233 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-----LLKIAKSEPPTLAQPSR 233 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-----HHHHhhcCCCCCCCccc
Confidence 334567899999999874 34577899999999999999999999864332110 00111111111111211
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...++.+++.+||+.+|.+||++.++++
T Consensus 234 ----~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 234 ----WSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ----cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2235889999999999999999999875
No 211
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.1e-34 Score=313.41 Aligned_cols=248 Identities=26% Similarity=0.440 Sum_probs=198.3
Q ss_pred CccccCCceeEEEEEECC--C--cEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEec
Q 001494 802 HCIGKGGQGSVYKVELAS--G--EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYL 877 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 877 (1067)
++||+|++|.||+|...+ + ..||+|.+...... ...+.+..|+.++++++||||+++++++.+ ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999997643 3 36899998765332 456789999999999999999999999988 8899999999
Q ss_pred cCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCc
Q 001494 878 EMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSN 957 (1067)
Q Consensus 878 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 957 (1067)
++++|.+++..... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++.+......
T Consensus 78 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 78 PLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999999865432 5689999999999999999999999 9999999999999999999999999999876543221
Q ss_pred c---ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 958 W---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 958 ~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
+ ....++..|+|||++.+..++.++|||||||++|||++ |+.||+....... ...... .......+.
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~-~~~~~~~~~--- 224 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI-----LKKIDK-EGERLERPE--- 224 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHh-cCCcCCCCc---
Confidence 1 12456788999999988889999999999999999999 9999864332110 000110 111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..+..+.+++.+|++.+|++||++.++++.|.
T Consensus 225 -~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 -ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 12345889999999999999999999999874
No 212
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-35 Score=295.76 Aligned_cols=262 Identities=22% Similarity=0.375 Sum_probs=215.9
Q ss_pred HHHHHHHhcCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEe
Q 001494 788 YEEIIRATNDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCS 865 (1067)
Q Consensus 788 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 865 (1067)
++++.+.+. +.||+|+|+.|-.+ ...+|..||||++.+. .+ .....+.+|++++.+. .|+||+.++++|+
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~g--HsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PG--HSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC-Cc--hHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 555555443 67999999999986 6789999999999765 22 3357788999999999 5999999999999
Q ss_pred eCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCC---eEE
Q 001494 866 HAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNE---ARV 942 (1067)
Q Consensus 866 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~---~kl 942 (1067)
+++.+|+|||-|.||.+...+++.. .+++.++.+++++|+.||.|||.+ ||.|||+||+|||-..... +||
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceee
Confidence 9999999999999999998886544 488899999999999999999999 9999999999999976654 899
Q ss_pred eccccceecCCC-------CCccccccccccccCccccc---c--CCCCccchhHHHHHHHHHHHhCCCCCCcccc----
Q 001494 943 SDFGIAKFLKPD-------SSNWTELAGTYGYVAPELAY---T--MKVTEKCDVYSFGVLALEVIKGKHPGDFISL---- 1006 (1067)
Q Consensus 943 ~DfG~a~~~~~~-------~~~~~~~~gt~~y~aPE~~~---~--~~~~~~~DvwslGvil~elltg~~p~~~~~~---- 1006 (1067)
|||.+.....-. .....+.+|+..|||||+.. + ..|+.+.|.||+|||+|-|++|..||.+.=.
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 999987543211 12234578889999999754 2 2478999999999999999999999854211
Q ss_pred ---ccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1007 ---ISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1007 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
-+.-.......+..+.++.+.+|...+...+.+..+++...+..|+.+|-++.++++
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 111123445567788899999999999999999999999999999999999998875
No 213
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.6e-34 Score=314.67 Aligned_cols=252 Identities=28% Similarity=0.491 Sum_probs=200.4
Q ss_pred cCCCccCccccCCceeEEEEEEC-CC---cEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCcee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SG---EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 871 (1067)
++|+..+.||+|+||.||+|... ++ ..+|+|.+.... .....+++..|++++++++|||++++.+++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 46788899999999999999764 33 379999986532 2233567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+||||+++++|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++...
T Consensus 83 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 83 IITEYMENGALDKYLRDH--DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 999999999999998542 24589999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCcc-c--cccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CC
Q 001494 952 KPDSSNW-T--ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RL 1026 (1067)
Q Consensus 952 ~~~~~~~-~--~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1026 (1067)
....... . ....++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--------~~~~~~i~~~~~~ 229 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--------HEVMKAINDGFRL 229 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--------HHHHHHHhcCCCC
Confidence 4322211 1 1223457999999988889999999999999999998 9999854322 1111111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
+.+. +...++.+++.+||+.+|++||++.+|++.|+
T Consensus 230 ~~~~----~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~ 265 (268)
T cd05063 230 PAPM----DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLD 265 (268)
T ss_pred CCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1111 22345889999999999999999999999884
No 214
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=6.3e-35 Score=329.06 Aligned_cols=254 Identities=24% Similarity=0.326 Sum_probs=195.6
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.+.||+|+||+||+++. .+++.||+|++...........+.+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688999999999999999975 468999999986422222233456888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++.+. ...+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 999999999998542 33588999999999999999999999 9999999999999999999999999999766543
Q ss_pred CC-ccccccccccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccC--CCC
Q 001494 955 SS-NWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD--PRL 1026 (1067)
Q Consensus 955 ~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 1026 (1067)
.. ......||+.|+|||++.. ..++.++||||+||++|||++|+.||........ ...+.. ...
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~--------~~~i~~~~~~~ 227 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET--------YGKIMNHKEHF 227 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH--------HHHHHcCCCcc
Confidence 22 2223568999999998863 4578899999999999999999999864332111 111111 111
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCC--CCCCHHHHHH
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPE--SRPTMQKVSQ 1063 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~--~Rpt~~evl~ 1063 (1067)
..+.. ......++.+++.+|+..+++ .||++.++++
T Consensus 228 ~~~~~-~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 228 QFPPD-VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred cCCCc-cCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 11111 011233478888887765443 4789988875
No 215
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-34 Score=322.49 Aligned_cols=254 Identities=24% Similarity=0.406 Sum_probs=199.6
Q ss_pred cCCCccCccccCCceeEEEEEEC--------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA--------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH 866 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 866 (1067)
.+|.+.++||+|+||.||+|+.. ....||+|.+.... ......++..|+.+++++ +||||+++++++.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 56888999999999999998642 34568999987432 223356788999999999 69999999999999
Q ss_pred CCceeEEEEeccCCCHHHHhcccC-------------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCcee
Q 001494 867 AQHSFIVYEYLEMGSLAMILSNDA-------------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVL 933 (1067)
Q Consensus 867 ~~~~~lv~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nil 933 (1067)
.+..|+||||+++|+|.+++.... ....+++.++.+++.|++.|++|||++ ||+||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEE
Confidence 999999999999999999986432 123588999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccc
Q 001494 934 LDFKNEARVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSS 1010 (1067)
Q Consensus 934 l~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~ 1010 (1067)
++.++.+||+|||.++........ .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-- 244 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE-- 244 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH--
Confidence 999999999999999865432211 112234467999999988889999999999999999999 888876433211
Q ss_pred chhhhhhhhhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1011 SLNLNIALDEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1011 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....+... ....+... ..++.+++.+||+.+|++|||+.|+++.|+
T Consensus 245 ------~~~~~~~~~~~~~~~~~----~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 291 (314)
T cd05099 245 ------LFKLLREGHRMDKPSNC----THELYMLMRECWHAVPTQRPTFKQLVEALD 291 (314)
T ss_pred ------HHHHHHcCCCCCCCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111111 11112221 234889999999999999999999999874
No 216
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.6e-34 Score=314.17 Aligned_cols=252 Identities=27% Similarity=0.392 Sum_probs=201.2
Q ss_pred CCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCC---ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPG---EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
+|+..+.||+|+||+||+|...+++.+|+|.+...... .....+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47888999999999999998888999999998654322 122345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++++|.+++.+. ..+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 9999999999998543 3478899999999999999999999 999999999999999999999999999876532
Q ss_pred C------CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 954 D------SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 954 ~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
. ........|+..|+|||++.+..++.++||||+||++|||++|+.||......... ............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~ 229 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM-----FYIGAHRGLMPR 229 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH-----HHhhhccCCCCC
Confidence 1 11123356888999999999888999999999999999999999998643321100 000011011111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.+.. ...++.+++.+||+.+|++||++.|+++
T Consensus 230 ~~~~----~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 230 LPDS----FSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCC----CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1222 2234889999999999999999999875
No 217
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.5e-34 Score=312.62 Aligned_cols=250 Identities=26% Similarity=0.442 Sum_probs=200.7
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.+|+..+.||+|+||.||+|...+++.+|+|++...... ..++.+|++++++++||+++++++++......++|||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 467888999999999999998877889999998643221 3568899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++... ...++++.+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 80 FMEHGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred cCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 99999999988542 23578999999999999999999999 99999999999999999999999999998654322
Q ss_pred Cc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCCCcc
Q 001494 956 SN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIPSHN 1032 (1067)
Q Consensus 956 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1032 (1067)
.. .....++.+|+|||.+.+..++.++||||+|+++|||++ |+.||...... .....+... ....+..
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~- 225 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--------EVVETINAGFRLYKPRL- 225 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHhCCCCCCCCCC-
Confidence 11 122334678999999988889999999999999999998 99998643211 111111111 1111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....+.+++.+||+.+|++|||+.|+++.|.
T Consensus 226 ---~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 ---ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1235899999999999999999999999874
No 218
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.7e-34 Score=317.37 Aligned_cols=260 Identities=23% Similarity=0.386 Sum_probs=199.9
Q ss_pred cCCCccCccccCCceeEEEEEE-----CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--C
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-----ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--Q 868 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 868 (1067)
..|+..+.||+|+||.||.++. .+++.||+|.+.... .....+.+.+|++++++++|||++++++++.+. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 3467889999999999999863 367889999986442 233356789999999999999999999998775 5
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIA 948 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a 948 (1067)
..++||||+++++|.+++... ...+++.++..++.|++.|++|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 689999999999999998543 23589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCc---cccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc-------ccchhhhhhh
Q 001494 949 KFLKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLIS-------SSSLNLNIAL 1018 (1067)
Q Consensus 949 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~-------~~~~~~~~~~ 1018 (1067)
+........ .....++..|+|||++.+..++.++|||||||++|||++++.|+....... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 876543221 123456778999999988889999999999999999999887642211000 0000000011
Q ss_pred hhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1019 DEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1019 ~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...... ..+.+.. ...++.+++.+||+.+|++|||+.++++.++
T Consensus 237 ~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 281 (284)
T cd05079 237 RVLEEGKRLPRPPN----CPEEVYQLMRKCWEFQPSKRTTFQNLIEGFE 281 (284)
T ss_pred HHHHcCccCCCCCC----CCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 111111 1111211 2345899999999999999999999999875
No 219
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.3e-34 Score=316.78 Aligned_cols=259 Identities=27% Similarity=0.448 Sum_probs=197.2
Q ss_pred cCCCccCccccCCceeEEEEEE-----CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--C
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-----ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--Q 868 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 868 (1067)
..|+..+.||+|+||+||++.. .+++.||+|++... .....+.+.+|++++++++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 4678889999999999999864 36889999998643 233456789999999999999999999987543 4
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIA 948 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a 948 (1067)
..++||||+++++|.+++... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 689999999999999998543 23589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCcc---ccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc----chh---hhhhh
Q 001494 949 KFLKPDSSNW---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSS----SLN---LNIAL 1018 (1067)
Q Consensus 949 ~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~----~~~---~~~~~ 1018 (1067)
+......... ....++..|+|||++.+..++.++|||||||++|||++|..|+......... ... .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 8765332211 1122345699999998888999999999999999999987764322111000 000 00000
Q ss_pred hhccCC--CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1019 DEILDP--RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1019 ~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+.... ..+.+.. ...++.+++.+||+.+|++||||.|+++.|+
T Consensus 236 ~~~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05081 236 IELLKNNGRLPAPPG----CPAEIYAIMKECWNNDPSQRPSFSELALQVE 281 (284)
T ss_pred HHHHhcCCcCCCCCC----CCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 111111 1111111 2235889999999999999999999999986
No 220
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-34 Score=316.02 Aligned_cols=252 Identities=26% Similarity=0.375 Sum_probs=198.7
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|...+.||+|+||.||+|+. .+++.||+|.+..... .....+.+|+.+++.++||||+++++++...+..|+||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG---EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 4677888999999999999965 5689999999865321 22356788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... +.+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 86 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 86 EFCGGGSLQDIYHVT---GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred eccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 999999999988543 3588999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCc
Q 001494 955 SSNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSH 1031 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1067)
........|++.|+|||++. ...++.++||||+||++|||++|+.||........ ...........+.....
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~-- 234 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA---LFLMTKSNFQPPKLKDK-- 234 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh---HHhhhccCCCCCccccc--
Confidence 33344567899999999874 44588899999999999999999999743221100 00000001111111100
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
......+.+++.+|++.+|++|||+.++++
T Consensus 235 --~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 235 --MKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred --CCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 012234889999999999999999999875
No 221
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-36 Score=324.75 Aligned_cols=249 Identities=25% Similarity=0.396 Sum_probs=200.8
Q ss_pred CCccCccccCCceeEEEEEECC-CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVELAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|.+...||.|+||.||+|..+. +-..|.|++... .....++|+-||++++..+||+||++++.|..++.+||+.||
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 3455679999999999986553 444566766432 233467899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
|.||-.+.++-+ -...+++.++..+++|++.||.|||++ .|||||+|+.|||++-+|.++++|||.+......-.
T Consensus 111 C~GGAVDaimlE--L~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~q 185 (1187)
T KOG0579|consen 111 CGGGAVDAIMLE--LGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQ 185 (1187)
T ss_pred cCCchHhHHHHH--hccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHh
Confidence 999999888743 344689999999999999999999999 999999999999999999999999999876555555
Q ss_pred ccccccccccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCc
Q 001494 957 NWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSH 1031 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1067)
....+.|||.|||||++. ..+|++++||||||+.+.||..+.+|.....++ +.-..+..--.|.+..|.+
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM-----RVllKiaKSePPTLlqPS~ 260 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVLLKIAKSEPPTLLQPSH 260 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH-----HHHHHHhhcCCCcccCcch
Confidence 567789999999999764 467999999999999999999999996544332 1111222222233333333
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. ...+.+++.+|+.++|..||+++++++
T Consensus 261 W----s~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 261 W----SRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred h----hhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 2 235899999999999999999999976
No 222
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.9e-34 Score=317.97 Aligned_cols=251 Identities=25% Similarity=0.409 Sum_probs=201.7
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.++||+|+||.||+|.. .+++.||+|.+... .....+.+..|++++++++||||+++++++.++...|+||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 4588889999999999999976 46899999998643 3334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+......
T Consensus 82 e~~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 82 EFCDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 999999999998542 23589999999999999999999999 9999999999999999999999999998766544
Q ss_pred CCccccccccccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCC
Q 001494 955 SSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIP 1029 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1067)
........+++.|+|||.+. +..++.++||||||+++|||++|+.||........ .........+....+
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~ 231 (280)
T cd06611 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV-----LLKILKSEPPTLDQP 231 (280)
T ss_pred ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH-----HHHHhcCCCCCcCCc
Confidence 44444567899999999874 34467899999999999999999999864432110 001111111111112
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.. ...++.+++.+||+.+|++||++.++++
T Consensus 232 ~~----~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 232 SK----WSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred cc----CCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 11 2234889999999999999999999976
No 223
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.5e-34 Score=320.02 Aligned_cols=264 Identities=25% Similarity=0.399 Sum_probs=203.9
Q ss_pred ccHHHHHHHhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEE
Q 001494 786 IVYEEIIRATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGF 863 (1067)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 863 (1067)
+.++.+.++.++|++.+.||+|+||.||+|.. .+++.+|+|+..... ....++..|+.+++++ +||||++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 83 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGM 83 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeee
Confidence 33455556778999999999999999999865 468899999875321 1235677899999999 69999999998
Q ss_pred Ee-----eCCceeEEEEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC
Q 001494 864 CS-----HAQHSFIVYEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK 937 (1067)
Q Consensus 864 ~~-----~~~~~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~ 937 (1067)
+. .++..++||||+++++|.+++... .....+++..+..++.|+++|+.|||+. +|+||||||+||+++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~ 160 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTE 160 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCC
Confidence 74 345689999999999999887532 2334688899999999999999999999 99999999999999999
Q ss_pred CCeEEeccccceecCCCCCccccccccccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCccccccccch
Q 001494 938 NEARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL 1012 (1067)
Q Consensus 938 ~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~ 1012 (1067)
+.+|++|||+++.............|++.|+|||++.. ..++.++||||+||++|||++|+.||.........
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~-- 238 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL-- 238 (286)
T ss_pred CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH--
Confidence 99999999999876544333344578999999998753 44788999999999999999999998643321110
Q ss_pred hhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1013 NLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
........+....+.. ...++.+++.+||+.+|++|||+.|+++..
T Consensus 239 ---~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 239 ---FKIPRNPPPTLHQPEL----WSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred ---hhccccCCCcccCCCC----cCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0011111111111111 123488999999999999999999998753
No 224
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.2e-34 Score=319.76 Aligned_cols=250 Identities=25% Similarity=0.442 Sum_probs=202.8
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
..+|+..+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++...+..|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 36789999999999999999975 5799999999865322 2246688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++++|.+++.+ ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.....
T Consensus 95 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 95 MEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred ecccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 999999999999853 2478899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.........+++.|+|||.+.+..++.++|||||||++|++++|+.||.......... .......+....+
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-----~~~~~~~~~~~~~---- 238 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-----LIATNGTPELQNP---- 238 (297)
T ss_pred CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-----eeccCCCCCCCCc----
Confidence 4433345578899999999988889999999999999999999999986433211000 0000001111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
......+.+++.+||+.+|++||++.++++
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 239 ERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 122334789999999999999999999986
No 225
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2e-34 Score=316.77 Aligned_cols=249 Identities=27% Similarity=0.437 Sum_probs=203.4
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||.|+||.||+|... +++.||+|++.... .......+.+|+++++.++|||++++++++.++...|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 36788899999999999999654 68999999986542 2233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||+++.....
T Consensus 79 e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 79 EYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred EeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 999999999998543 689999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........+++.|+|||.+.+..++.++|||||||++|||+||+.||........ .........+.. +..
T Consensus 152 ~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-----~~~~~~~~~~~~--~~~--- 221 (274)
T cd06609 152 MSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-----LFLIPKNNPPSL--EGN--- 221 (274)
T ss_pred ccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-----HHHhhhcCCCCC--ccc---
Confidence 4444456788899999999988899999999999999999999999864332110 000111111111 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....++.+++.+||..+|++|||++++++
T Consensus 222 ~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 222 KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 02335889999999999999999999975
No 226
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.9e-34 Score=316.23 Aligned_cols=253 Identities=24% Similarity=0.405 Sum_probs=198.7
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCc----EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGE----IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
..+|+..++||+|+||+||+|+. .+++ .||+|++.... .....+++.+|+.+++.++||||+++++++.. ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~ 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-ST 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CC
Confidence 35788899999999999999964 4454 48999986532 23345678899999999999999999999875 45
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccce
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAK 949 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~ 949 (1067)
.+++|||+++|++.+++... ...+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCcee
Confidence 78999999999999998542 23588999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCC
Q 001494 950 FLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRL 1026 (1067)
Q Consensus 950 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1067)
........ .....+++.|+|||...+..++.++|||||||++|||++ |..||+...... ........ ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~--~~~ 230 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE-----IPDLLEKG--ERL 230 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHCC--CcC
Confidence 76533221 112234678999999988889999999999999999998 899986433211 01111111 111
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..+.. ...++.+++.+||+.||++||++.++++.|+
T Consensus 231 ~~~~~----~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 231 PQPPI----CTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred CCCcc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 2335889999999999999999999998764
No 227
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9e-35 Score=331.75 Aligned_cols=260 Identities=20% Similarity=0.300 Sum_probs=196.7
Q ss_pred HhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC-----
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA----- 867 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 867 (1067)
..++|+..+.||+|+||.||++.. .+++.||||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC-hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 457899999999999999999965 46889999998754332 23346778899999999999999999988643
Q ss_pred -CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 868 -QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 868 -~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
...|+||||+++ ++.+.+. ..+++..+..++.|+++||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 357999999976 5555553 2378889999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh------------
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL------------ 1014 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~------------ 1014 (1067)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 165 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 165 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred ccccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99865432 22344578999999999998889999999999999999999999986533211100000
Q ss_pred --hhhhhhccCCC----------------CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1015 --NIALDEILDPR----------------LPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1015 --~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
........... .............++.+++.+|++.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000000 000000111123457899999999999999999999863
No 228
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.9e-34 Score=310.98 Aligned_cols=248 Identities=29% Similarity=0.438 Sum_probs=201.8
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
++|+..+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++.+.+..++|||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 56888999999999999999776 88899999875422 35778999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ...+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.++......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 81 YMAKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred ecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 999999999986433 23589999999999999999999999 99999999999999999999999999998763221
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
.....+..|+|||++.+..++.++||||||+++||+++ |+.||....... ........ .....+..
T Consensus 157 ---~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~--~~~~~~~~--- 223 (256)
T cd05039 157 ---DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPHVEKG--YRMEAPEG--- 223 (256)
T ss_pred ---ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHhcC--CCCCCccC---
Confidence 12334567999999988889999999999999999997 999986432211 00111110 11111111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+.++.+++.+||..+|++|||+.|++++|+
T Consensus 224 -~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 224 -CPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred -CCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 2235889999999999999999999999885
No 229
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.5e-34 Score=319.98 Aligned_cols=257 Identities=25% Similarity=0.375 Sum_probs=200.2
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..++||+|+||.||++.. .+++.||+|.+.... ......++.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 3688999999999999999865 468889999886432 2334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... ..+++..+..++.|+++|++|||+.+ +++||||||+||+++.++.+||+|||++......
T Consensus 79 ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 79 EHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred eccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 999999999999643 45788999999999999999999732 8999999999999999999999999998765432
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh--------------------
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL-------------------- 1014 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~-------------------- 1014 (1067)
......+++.|+|||.+.+..++.++|||||||++|||++|+.||.............
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence 1234578899999999888889999999999999999999999985332110000000
Q ss_pred --------hhhhhhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1015 --------NIALDEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1015 --------~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.......... ....+.. ....++.+++.+||+.+|++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSG---AFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCc---ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000 0000100 123358899999999999999999999864
No 230
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3e-34 Score=314.34 Aligned_cols=253 Identities=26% Similarity=0.361 Sum_probs=188.3
Q ss_pred CccccCCceeEEEEEECC---CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEecc
Q 001494 802 HCIGKGGQGSVYKVELAS---GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLE 878 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 878 (1067)
+.||+|+||+||+|+..+ ...+|+|.+.... .......+.+|++.++.++||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 359999999999986543 3468888775432 23335678899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCc--cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 879 MGSLAMILSNDAA--AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 879 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+|+|.+++..... ....++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchh
Confidence 9999999865332 22356778889999999999999999 999999999999999999999999999875433221
Q ss_pred --ccccccccccccCcccccc-------CCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCC
Q 001494 957 --NWTELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRL 1026 (1067)
Q Consensus 957 --~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1067)
......+++.|+|||++.. ..++.++|||||||++|||++ |..||........ ....... ....+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~----~~~~~~~-~~~~~ 230 (269)
T cd05042 156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV----LKQVVRE-QDIKL 230 (269)
T ss_pred eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH----HHHHhhc-cCccC
Confidence 1123345678999998643 346789999999999999999 7888764322110 0000010 01111
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
+.+ .........+.+++..|| .||++|||+.||++.|.
T Consensus 231 ~~~-~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKP-QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCC-cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111 111122344778889999 59999999999999873
No 231
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.3e-34 Score=312.12 Aligned_cols=250 Identities=32% Similarity=0.492 Sum_probs=200.0
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCCh------hHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEM------TFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
+|...+.||+|+||.||+|.. .+++.||+|.+........ ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367788999999999999965 4688999998865433221 223568899999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccce
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAK 949 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~ 949 (1067)
.++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 99999999999999999543 3578899999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccC
Q 001494 950 FLKPDSS------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD 1023 (1067)
Q Consensus 950 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1023 (1067)
....... ......|+..|+|||.+.+..++.++||||+||++|||++|+.||........ .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~ 229 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA-----IFKIGENAS 229 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH-----HHHHhccCC
Confidence 7653211 11234578899999999888899999999999999999999999874332110 011111111
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1024 PRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1024 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+. .+.. ....+.+++.+||+.||++||++.|+++
T Consensus 230 ~~--~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 230 PE--IPSN----ISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred Cc--CCcc----cCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11 1111 2235889999999999999999999986
No 232
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-34 Score=319.22 Aligned_cols=253 Identities=26% Similarity=0.407 Sum_probs=201.2
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||+|... +++.||+|.+.... .....+++.+|+.++++++||||+++++++...+..|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 36888899999999999999765 78999999886432 2223467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|..++........+++..+..++.+++.|++|||+.+ +|+||||||+||+++.++.+||+|||.+..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 99999999998865433456899999999999999999999632 8999999999999999999999999999765432
Q ss_pred CCccccccccccccCccccccCC------CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCC-CC
Q 001494 955 SSNWTELAGTYGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPR-LP 1027 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1027 (1067)
......+++.|+|||.+.+.. ++.++||||+||++|||++|+.||...... ........+.... ..
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~ 229 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----NIFAQLSAIVDGDPPT 229 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----hHHHHHHHHhhcCCCC
Confidence 223346788999999885543 478999999999999999999998643211 1111112222211 11
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.+. ....++.+++.+||+.+|++||++.++++
T Consensus 230 ~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 230 LPS----GYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred CCc----ccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 122 23345889999999999999999999986
No 233
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.7e-34 Score=313.54 Aligned_cols=253 Identities=29% Similarity=0.436 Sum_probs=204.0
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||+|.. .+++.+|+|.+...... ..+.+.+|++++++++||||+++++++.+.+..|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD---DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh---hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 5788899999999999999975 46788999998754322 3577889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++++++.+++... ...+++.++..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+......
T Consensus 80 e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 80 EYCGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred eCCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 999999999988543 24588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCccccccccccccCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCc
Q 001494 955 SSNWTELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSH 1031 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1067)
........++..|+|||.+.+. .++.++||||||+++|||++|+.||......... ............. .
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~----~ 227 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL---FLISKSNFPPPKL----K 227 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHhccCCCccc----c
Confidence 3333455788899999998776 7889999999999999999999998643321110 0000010111111 1
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.......++.+++.+||+.+|.+|||+.+++.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 12233456899999999999999999999975
No 234
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.2e-34 Score=313.88 Aligned_cols=257 Identities=26% Similarity=0.431 Sum_probs=204.5
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.+.||.|+||+||+|.. .++..+|+|++....... ..+.+.+|++.++.++|+|++++++.+..++..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 4688999999999999999975 468899999986543222 4578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++++++.+++........+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 9999999999996544445689999999999999999999999 9999999999999999999999999999766543
Q ss_pred CCc----cccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCC
Q 001494 955 SSN----WTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIP 1029 (1067)
Q Consensus 955 ~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1067)
... .....|+..|+|||++... .++.++|||||||++|||++|+.||......... ...... ..+.....
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~----~~~~~~-~~~~~~~~ 230 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL----MLTLQN-DPPSLETG 230 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhH----HHHhcC-CCCCcCCc
Confidence 322 1334688999999988776 7899999999999999999999998644321100 000000 01111110
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
........++.+++.+||+.||++||++.++++
T Consensus 231 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 231 -ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 001123345889999999999999999999986
No 235
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-34 Score=347.96 Aligned_cols=256 Identities=24% Similarity=0.357 Sum_probs=198.3
Q ss_pred HhcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--Cce
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHS 870 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 870 (1067)
...+|.+.++||+|+||+||+|+.. +++.||+|++...... ......+..|+.++++++|||||+++++|.+. ..+
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3468999999999999999999654 6778999998754322 23456789999999999999999999988543 568
Q ss_pred eEEEEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCC----CCeeecCCCCCceeeCCC--------
Q 001494 871 FIVYEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCF----PPIVHRDISSKNVLLDFK-------- 937 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----~~ivHrDlk~~Nill~~~-------- 937 (1067)
|+||||+++|+|.+++... .....+++..++.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999999988642 223468999999999999999999998521 259999999999999642
Q ss_pred ---------CCeEEeccccceecCCCCCccccccccccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCcccc
Q 001494 938 ---------NEARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPGDFISL 1006 (1067)
Q Consensus 938 ---------~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~ 1006 (1067)
+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 348999999998764332 2234578999999998864 4588999999999999999999999864332
Q ss_pred ccccchhhhhhhhhccC-CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1007 ISSSSLNLNIALDEILD-PRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1007 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.. .....+.. +.++.+ ....++.++|..||+.+|.+||++.|+++
T Consensus 249 ~~-------qli~~lk~~p~lpi~-----~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 249 FS-------QLISELKRGPDLPIK-----GKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HH-------HHHHHHhcCCCCCcC-----CCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 11 11111111 111111 12235889999999999999999999984
No 236
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.9e-35 Score=329.28 Aligned_cols=254 Identities=24% Similarity=0.320 Sum_probs=197.3
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.++||+|+||+||+++.. +++.||+|++...........+.+.+|+.++..++|++|+++++++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999754 68889999986422122223455788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999999642 23578899999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-ccccccccccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccC--CCC
Q 001494 955 SS-NWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD--PRL 1026 (1067)
Q Consensus 955 ~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 1026 (1067)
.. ......||+.|+|||++.+ +.++.++||||+||++|||++|+.||...... .....+.. .+.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~ 227 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV--------ETYGKIMNHEERF 227 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH--------HHHHHHHcCCCcc
Confidence 22 2233579999999998875 45788999999999999999999998643321 11111111 111
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPES--RPTMQKVSQ 1063 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~evl~ 1063 (1067)
..+.. ......++.+++.+|+..++++ |++++++++
T Consensus 228 ~~p~~-~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 228 QFPSH-ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cCCCc-cccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 11211 1122345888999999876554 467887764
No 237
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.9e-34 Score=314.89 Aligned_cols=239 Identities=21% Similarity=0.385 Sum_probs=186.4
Q ss_pred ccccCCceeEEEEEECC-------------------------CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCee
Q 001494 803 CIGKGGQGSVYKVELAS-------------------------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 857 (1067)
Q Consensus 803 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 857 (1067)
.||+|+||.||+|.... ...||+|++... ......++.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 69999999999986421 135888887532 22334678889999999999999
Q ss_pred eeeeEEEeeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC
Q 001494 858 VKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK 937 (1067)
Q Consensus 858 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~ 937 (1067)
+++++++.+....++||||+++|+|..++... ...+++..+..++.|+++|++|||++ +|+||||||+||+++..
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 99999999999999999999999999988542 34578999999999999999999999 99999999999999865
Q ss_pred C-------CeEEeccccceecCCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHH-hCCCCCCcccccc
Q 001494 938 N-------EARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVI-KGKHPGDFISLIS 1008 (1067)
Q Consensus 938 ~-------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ell-tg~~p~~~~~~~~ 1008 (1067)
+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||.......
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred CcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 4 3799999988654322 22356788999998865 45899999999999999995 6899986433211
Q ss_pred ccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1009 SSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
. ..........+.... ..+.+++.+||+.+|++|||+.++++.|.
T Consensus 230 ~---------~~~~~~~~~~~~~~~----~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 K---------ERFYEKKHRLPEPSC----KELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H---------HHHHHhccCCCCCCC----hHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1 011111112222221 24889999999999999999999999874
No 238
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.7e-34 Score=319.84 Aligned_cols=260 Identities=23% Similarity=0.336 Sum_probs=191.6
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC---CCCeeeeeeEEEee-----C
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI---RHRNIVKFYGFCSH-----A 867 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~ 867 (1067)
+|+..+.||+|+||+||+|+.. +++.||+|.+....... .....+.+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 4788899999999999999654 78999999987543222 1123455677766655 79999999998864 2
Q ss_pred CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccc
Q 001494 868 QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGI 947 (1067)
Q Consensus 868 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~ 947 (1067)
...++||||+++ ++..++.... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 457999999985 7887775432 24589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh--------hhhh
Q 001494 948 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN--------IALD 1019 (1067)
Q Consensus 948 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~--------~~~~ 1019 (1067)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.............. .+..
T Consensus 155 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 155 ARIYSCQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred cccccCc-ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 9866432 222345678999999999888899999999999999999999999864322110000000 0000
Q ss_pred hc------cCCCCCCC-CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1020 EI------LDPRLPIP-SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1020 ~~------~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.. ..+....+ .....+...++.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 00000000 0001122345789999999999999999999975
No 239
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.3e-34 Score=310.96 Aligned_cols=251 Identities=27% Similarity=0.361 Sum_probs=201.0
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee-CCceeEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH-AQHSFIVY 874 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 874 (1067)
.|+..+.||+|++|.||++.. .+++.||+|++...... ....+.+..|++++++++|||++++++.+.. +...++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 478889999999999999865 46789999998643322 2234568899999999999999999998764 44679999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++++++.+++... ....+++.++..++.+++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 80 GFCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred cccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 999999999998643 234589999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........+++.|+|||++.+..++.++||||+|+++|||++|+.||+..... .....+.....+... .
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~---~ 224 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN--------SLVYRIIEGKLPPMP---K 224 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhcCCCCCc---c
Confidence 44444567889999999999988999999999999999999999998643321 111111111111111 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....++.+++.+|++.+|++|||+.++++
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 225 DYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 23345889999999999999999999986
No 240
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=290.06 Aligned_cols=250 Identities=26% Similarity=0.412 Sum_probs=195.3
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
+.+....||.|..|+||+++.+ +|..+|||.+... +.....++++..+.++..- ++|+||+.+|||..+...++.|
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence 4455677999999999999765 6899999999865 3344457788888876655 5899999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|.|.. -.+..+.+ ..+++++.-+-++...+.+||.||.++. +|+|||+||+|||+|+.|++|+||||++..+.+.
T Consensus 171 elMs~-C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 171 ELMST-CAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHH-HHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc
Confidence 99853 34444432 2345788888889999999999999884 9999999999999999999999999999877643
Q ss_pred CCccccccccccccCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC-CCC
Q 001494 955 SSNWTELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP-IPS 1030 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1030 (1067)
...+..+|-+.|||||.+.-. .|+.++||||||+.++|+.||+.||..-.. ..+.+..+.+...+ .+.
T Consensus 246 -kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t-------dFe~ltkvln~ePP~L~~ 317 (391)
T KOG0983|consen 246 -KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT-------DFEVLTKVLNEEPPLLPG 317 (391)
T ss_pred -cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc-------cHHHHHHHHhcCCCCCCc
Confidence 334567899999999988643 588999999999999999999999875332 12222233332111 111
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1031 HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1031 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+ ...+..+.+++..||++|+.+||.+.++++
T Consensus 318 ~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 318 H--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred c--cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 1 113445899999999999999999999886
No 241
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.9e-34 Score=313.43 Aligned_cols=253 Identities=28% Similarity=0.497 Sum_probs=200.2
Q ss_pred cCCCccCccccCCceeEEEEEEC-CC---cEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCcee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SG---EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 871 (1067)
.+|+..+.||+|+||.||+|+.. ++ ..||+|++.... .....++|..|+.+++.++||||+++++++.+++..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 35788899999999999999754 33 369999986542 2334578999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+||||+++++|.+++... .+.+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++|||++...
T Consensus 82 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 82 IITEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 999999999999998543 34589999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCc--ccc-cc--ccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCC
Q 001494 952 KPDSSN--WTE-LA--GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPR 1025 (1067)
Q Consensus 952 ~~~~~~--~~~-~~--gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1067)
...... ... .. .+..|+|||.+.+..++.++||||+||++||+++ |..||....... ....... ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-----~~~~i~~--~~~ 229 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-----VINAIEQ--DYR 229 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-----HHHHHHc--CCc
Confidence 432221 111 11 2457999999998889999999999999999986 999986433211 1111111 111
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1026 LPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1026 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+.+.. .+..+.+++.+||+.+|++||++.++++.|+
T Consensus 230 ~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 230 LPPPMD----CPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred CCCccc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 122222 2335889999999999999999999999875
No 242
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.6e-34 Score=318.01 Aligned_cols=260 Identities=21% Similarity=0.355 Sum_probs=200.8
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||+|... +|+.||+|++....... ...+.+.+|+.++++++|||++++++++......++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP-VIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCc-cccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 36888899999999999999765 68999999986443221 23456789999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++++++..+.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 80 EYCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred eccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999999888876432 3489999999999999999999999 9999999999999999999999999999877654
Q ss_pred CCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhh---------------
Q 001494 955 SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIAL--------------- 1018 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~--------------- 1018 (1067)
........++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......... ......
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLY-LIRKTLGDLIPRHQQIFSTNQ 232 (286)
T ss_pred cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCChHHhhhccccc
Confidence 433445567889999998876 457899999999999999999999986443211100 000000
Q ss_pred --hhccCCCCCCCCc---chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1019 --DEILDPRLPIPSH---NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1019 --~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.....+....... ........+.+++.+||+.+|++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000000000 00112345889999999999999999999875
No 243
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.9e-34 Score=330.12 Aligned_cols=259 Identities=21% Similarity=0.306 Sum_probs=196.2
Q ss_pred HhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC-----
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA----- 867 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 867 (1067)
..++|+..+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc-hhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 346899999999999999999864 468899999987543322 3346778999999999999999999987543
Q ss_pred -CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 868 -QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 868 -~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
...|+||||+++ ++.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999976 5666653 2378889999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-----------
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN----------- 1015 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~----------- 1015 (1067)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..............
T Consensus 172 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 172 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred CccccCCC-CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99865432 223445789999999999999999999999999999999999999865432111000000
Q ss_pred ---hhhhhccC--------------CCCCCC--CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1016 ---IALDEILD--------------PRLPIP--SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1016 ---~~~~~~~~--------------~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
........ +....+ .........++.+++.+|++.||.+|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 000000 0000112235789999999999999999999986
No 244
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6.4e-34 Score=311.81 Aligned_cols=247 Identities=24% Similarity=0.383 Sum_probs=192.0
Q ss_pred CccccCCceeEEEEEEC-CCc--EEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEEEec
Q 001494 802 HCIGKGGQGSVYKVELA-SGE--IIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVYEYL 877 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 877 (1067)
+.||+|+||.||+|+.. ++. .+|+|.+.... .....+.+..|+++++++ +||||+++++++...+..|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 36899999999999765 343 46888876432 223356788999999999 7999999999999999999999999
Q ss_pred cCCCHHHHhcccC-------------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEec
Q 001494 878 EMGSLAMILSNDA-------------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSD 944 (1067)
Q Consensus 878 ~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~D 944 (1067)
++|+|.+++.... ....+++.++..++.|++.|++|||++ +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECC
Confidence 9999999986432 123478999999999999999999998 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccC
Q 001494 945 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILD 1023 (1067)
Q Consensus 945 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1023 (1067)
||++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||...... .....+..
T Consensus 156 fgl~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~~~~ 226 (270)
T cd05047 156 FGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEKLPQ 226 (270)
T ss_pred CCCccccchhh-hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--------HHHHHHhC
Confidence 99986322111 1111233567999999988889999999999999999997 99998643221 11111111
Q ss_pred C-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1024 P-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1024 ~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
. ....+.. ...++.+++.+||+.+|.+|||+.++++.|+
T Consensus 227 ~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 266 (270)
T cd05047 227 GYRLEKPLN----CDDEVYDLMRQCWREKPYERPSFAQILVSLN 266 (270)
T ss_pred CCCCCCCCc----CCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 1 1111111 2235889999999999999999999999874
No 245
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.3e-34 Score=311.57 Aligned_cols=250 Identities=23% Similarity=0.343 Sum_probs=203.4
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|+||.||+++. .+|+.||+|++...... ....+++.+|+.++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 478889999999999999864 57899999998653222 2234678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ...+++.++..++.|++.|++|||++ +++|+||+|+||+++.++.++++|||.+.......
T Consensus 80 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 80 YCEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred cCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 999999999885422 23478899999999999999999999 99999999999999999999999999998765443
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC-CCCcchH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP-IPSHNVQ 1034 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1034 (1067)
.......|++.|+|||+..+..++.++|||||||++|||++|+.||..... .....++...... .+.
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~---- 223 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM--------KNLVLKIIRGSYPPVSS---- 223 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH--------HHHHHHHhcCCCCCCcc----
Confidence 333345688899999999888899999999999999999999999863221 1112222222221 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....++.+++.+||+.+|++||++.+|++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 22335899999999999999999999986
No 246
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=9.2e-35 Score=328.03 Aligned_cols=255 Identities=23% Similarity=0.318 Sum_probs=196.4
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|++.++||+|+||+||+++.. +++.||+|++...........+.+..|+.++..++|++|+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888999999999999999765 57889999985422112223445788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++|+|.+++.+. ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 999999999999642 23588899999999999999999999 9999999999999999999999999999765433
Q ss_pred CC-ccccccccccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC--CC
Q 001494 955 SS-NWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP--RL 1026 (1067)
Q Consensus 955 ~~-~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 1026 (1067)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....+... +.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~--------~~~~i~~~~~~~ 227 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE--------TYGKIMNHKERF 227 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH--------HHHHHhCCCccc
Confidence 22 223457999999999886 3457889999999999999999999986443211 11111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPES--RPTMQKVSQL 1064 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~evl~~ 1064 (1067)
..+.. ......++.+++.+|+..++++ |+++.|+++.
T Consensus 228 ~~p~~-~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 QFPAQ-VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cCCCc-cccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 11111 1122345788999988665444 6889888753
No 247
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.1e-34 Score=310.09 Aligned_cols=247 Identities=28% Similarity=0.407 Sum_probs=197.1
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEe-eCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCS-HAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~ 874 (1067)
.+|+..+.||+|+||.||++... |+.||+|.+... ...+.+..|+.++++++|++++++++++. +++..++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 46888899999999999999765 788999998642 12467889999999999999999999764 456789999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.++++... ...+++..+..++.|++.|++|||++ +++||||||+||+++.++.+|++|||+++.....
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 80 EYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred ECCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 9999999999986433 23478999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
. ....++..|+|||++.+..++.++|||||||++|||++ |+.||........ .........+ ..+.
T Consensus 156 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~--~~~~--- 222 (256)
T cd05082 156 Q---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPRVEKGYKM--DAPD--- 222 (256)
T ss_pred C---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHhcCCCC--CCCC---
Confidence 2 22344568999999988889999999999999999998 9999764322110 0001110011 1111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+.+++.+||+.+|++|||+.++++.|+
T Consensus 223 -~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 223 -GCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred -CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 12335889999999999999999999999875
No 248
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.5e-34 Score=324.16 Aligned_cols=259 Identities=18% Similarity=0.267 Sum_probs=192.8
Q ss_pred ccCccccC--CceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 800 DEHCIGKG--GQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 800 ~~~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
..++||+| +|++||+++. .+|+.||+|++...... ....+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 45789999 7899999854 57899999998754322 23345677899999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++|++.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++++|||.+........
T Consensus 81 ~~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 81 MAYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred cCCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 99999999985432 23488999999999999999999999 999999999999999999999999987644321111
Q ss_pred c-------cccccccccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccC----
Q 001494 957 N-------WTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD---- 1023 (1067)
Q Consensus 957 ~-------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 1023 (1067)
. .....++..|+|||++.+ ..++.++|||||||++|||++|+.||+....................+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 0 112346778999999876 458899999999999999999999986433211000000000000000
Q ss_pred ---------------C-----------CCCC----CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1024 ---------------P-----------RLPI----PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1024 ---------------~-----------~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. .... ..........++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0 0000 00011122346889999999999999999999986
No 249
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=7.1e-34 Score=312.74 Aligned_cols=249 Identities=27% Similarity=0.416 Sum_probs=203.0
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
..|+..++||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 3577788999999999999975 468899999986432 2234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++.. .++++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 82 e~~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 82 EYLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred ecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 99999999998853 3478899999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........++..|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... ++....
T Consensus 155 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--------~~~~~~~~---~~~~~~ 223 (277)
T cd06640 155 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--------LFLIPKNN---PPTLTG 223 (277)
T ss_pred ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--------hhhhhcCC---CCCCch
Confidence 3333445678899999999888899999999999999999999999864332110 01110010 111223
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.....+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 224 EFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 344568999999999999999999999763
No 250
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4e-34 Score=312.96 Aligned_cols=251 Identities=24% Similarity=0.356 Sum_probs=186.2
Q ss_pred ccccCCceeEEEEEECCC---cEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 803 CIGKGGQGSVYKVELASG---EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 803 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
.||+|+||.||+++..++ ..+++|.+.... .....+.+.+|+..++.++||||+++++++.+....++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 599999999999865443 345666665432 223457899999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCc-cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC--C
Q 001494 880 GSLAMILSNDAA-AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS--S 956 (1067)
Q Consensus 880 g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~--~ 956 (1067)
|+|.++++.... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++....... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 999999865332 23466777889999999999999999 99999999999999999999999999986432211 1
Q ss_pred ccccccccccccCcccccc-------CCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCC
Q 001494 957 NWTELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPI 1028 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1067)
......++..|+|||++.. ..++.++|||||||++|||++ |..||+....................++....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLEL 236 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCC
Confidence 1234567889999998753 235789999999999999997 56677543321111100011111112222211
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
. ....+.+++..|| .+|++||++++|++.|
T Consensus 237 --~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 237 --P----YSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred --C----CcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 1 2234788999999 6799999999999887
No 251
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=8.5e-34 Score=307.38 Aligned_cols=247 Identities=28% Similarity=0.432 Sum_probs=197.5
Q ss_pred CccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCC
Q 001494 802 HCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGS 881 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 881 (1067)
++||+|+||.||++...+++.||+|++...... ...+.+..|++++++++||||+++++++.+....++||||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 469999999999998777999999998754332 345678999999999999999999999999999999999999999
Q ss_pred HHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcc--c
Q 001494 882 LAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNW--T 959 (1067)
Q Consensus 882 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~--~ 959 (1067)
+.+++... ...+++..+..++.+++.|++|||++ +++||||||+||+++.++.+||+|||.+.......... .
T Consensus 79 l~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 79 LLTFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 99998543 23578899999999999999999999 99999999999999999999999999997654221111 1
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLI 1038 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1067)
...++..|+|||.+.+..++.++|||||||++|||+| |..||....... ........ .....+. ....
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-----~~~~~~~~--~~~~~~~----~~~~ 222 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-----TRERIESG--YRMPAPQ----LCPE 222 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-----HHHHHhcC--CCCCCCc----cCCH
Confidence 1233567999999988889999999999999999999 888875433211 01111110 1111111 2233
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1039 SFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1039 ~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
++.+++.+|++.+|++|||+.|+++.|+
T Consensus 223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 223 EIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 5899999999999999999999999886
No 252
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-34 Score=331.21 Aligned_cols=254 Identities=23% Similarity=0.281 Sum_probs=195.0
Q ss_pred hcCCCccCccccCCceeEEEEEEC---CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCcee
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA---SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 871 (1067)
..+|.+.+.||+|+||.||++... +++.||+|.+... +...+|++++++++|||||++++++......+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 357999999999999999998643 4678999987532 23457999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+|||++. +++.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 163 lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDR---SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EEehhcC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 9999996 577777732 34589999999999999999999999 9999999999999999999999999999766
Q ss_pred CCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccch-----------------
Q 001494 952 KPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL----------------- 1012 (1067)
Q Consensus 952 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~----------------- 1012 (1067)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...........
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 54322 12346799999999999988999999999999999999999999854322100000
Q ss_pred ----hhhhhhhhc---cCCCCCCCCcc-hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1013 ----NLNIALDEI---LDPRLPIPSHN-VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1013 ----~~~~~~~~~---~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.......+. ..+....+... ......++.+++.+|++.||++|||+.|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 11111111100 0011235788999999999999999999986
No 253
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-34 Score=333.70 Aligned_cols=191 Identities=23% Similarity=0.308 Sum_probs=164.6
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
..|.+.+.||+|+||.||+|... +++.||||.... ..+.+|++++++++|||||++++++..++..++||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 46888999999999999999654 578899996431 34568999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|++. +++..++... ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 240 e~~~-~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 240 PKYR-SDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred EccC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 9995 6787777432 23589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCC
Q 001494 955 SS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPG 1001 (1067)
Q Consensus 955 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~ 1001 (1067)
.. ......||+.|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 22 122457999999999999999999999999999999999987663
No 254
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.5e-34 Score=317.35 Aligned_cols=247 Identities=26% Similarity=0.349 Sum_probs=203.2
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||++... +++.||+|++...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888899999999999999654 68999999986543223334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 999999999998543 4588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||..... ......+.......+...
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~-- 221 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--------IQIYEKILEGKVRFPSFF-- 221 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCCccCCccC--
Confidence 2345688999999999888889999999999999999999999864331 112222223333333332
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
...+.+++.+||+.+|++|| +++|+++
T Consensus 222 --~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 222 --SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred --CHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 23488999999999999999 7777653
No 255
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=6.6e-34 Score=310.44 Aligned_cols=246 Identities=27% Similarity=0.408 Sum_probs=189.5
Q ss_pred CccccCCceeEEEEEEC----CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEe-eCCceeEEEEe
Q 001494 802 HCIGKGGQGSVYKVELA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCS-HAQHSFIVYEY 876 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~E~ 876 (1067)
+.||+|+||.||+|... ++..||+|++... ......+.+..|+.+++.++||||+++++++. .++..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 46899999999998653 2457999987532 22334567889999999999999999999775 45568999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+.+++|.+++.... ...++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 79 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 79 MKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999999985432 3467788899999999999999999 999999999999999999999999999976543211
Q ss_pred ----ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhC-CCCCCccccccccchhhhhhhhhccCCC-CCCCC
Q 001494 957 ----NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-KHPGDFISLISSSSLNLNIALDEILDPR-LPIPS 1030 (1067)
Q Consensus 957 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1030 (1067)
......++..|+|||.+.+..++.++|||||||++|||++| ..||...... .....+.... ...+.
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 225 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--------DITVYLLQGRRLLQPE 225 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhcCCCCCCCC
Confidence 11223456789999999888899999999999999999995 5555533221 1111111111 11111
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1031 HNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1031 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
. .+..+.+++.+||+.+|++||++.|+++.|+
T Consensus 226 ~----~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 226 Y----CPDPLYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred c----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1 1235889999999999999999999999875
No 256
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.8e-34 Score=313.88 Aligned_cols=240 Identities=23% Similarity=0.415 Sum_probs=188.8
Q ss_pred CccccCCceeEEEEEEC-C-------CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 802 HCIGKGGQGSVYKVELA-S-------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
+.||+|+||.||+|... . ...||+|.+... .....+++.+|+.+++.++||||+++++++..++..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 46999999999998653 2 334888887532 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCC--------eEEecc
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNE--------ARVSDF 945 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~--------~kl~Df 945 (1067)
|||+++|+|..++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++. ++++||
T Consensus 78 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccc
Confidence 99999999999996432 3578999999999999999999999 9999999999999988765 599999
Q ss_pred ccceecCCCCCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCC-CCCCccccccccchhhhhhhhhccC
Q 001494 946 GIAKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGK-HPGDFISLISSSSLNLNIALDEILD 1023 (1067)
Q Consensus 946 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 1023 (1067)
|.+...... ....+++.|+|||++.+. .++.++|||||||++|||++|. .|+....... ......
T Consensus 153 g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~---------~~~~~~ 219 (258)
T cd05078 153 GISITVLPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK---------KLQFYE 219 (258)
T ss_pred ccccccCCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH---------HHHHHH
Confidence 998755432 234678899999998764 4789999999999999999985 5554322211 011111
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1024 PRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1024 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+.... .++.+++.+||+.+|++|||++++++.|+
T Consensus 220 ~~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 DRHQLPAPKW----TELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccccCCCCCc----HHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1222222222 34889999999999999999999999874
No 257
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.3e-34 Score=309.56 Aligned_cols=251 Identities=24% Similarity=0.418 Sum_probs=201.1
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
++|+..++||+|+||.||+|+...+..+|+|.+... ....+.+.+|++++++++|+||+++++++.+ ...+++||
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 578899999999999999998888888999987642 1234678899999999999999999999887 78899999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 81 FMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred eCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 999999999986532 34578899999999999999999998 99999999999999999999999999997654322
Q ss_pred Cc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 956 SN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 956 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.. .....++..|+|||++....++.++|+|||||++||+++ |+.||....... ........ .....+.
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~~~~~--~~~~~~~--- 226 (260)
T cd05073 157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----VIRALERG--YRMPRPE--- 226 (260)
T ss_pred cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHhCC--CCCCCcc---
Confidence 11 122345677999999988889999999999999999999 899986432210 00111111 1111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
....++.+++.+|++.+|++||++.++.+.|+
T Consensus 227 -~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 227 -NCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred -cCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 22345889999999999999999999999885
No 258
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.1e-34 Score=320.41 Aligned_cols=254 Identities=23% Similarity=0.295 Sum_probs=204.4
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||+|... +++.||+|.+...........+.+..|+++++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999765 58999999997654333334567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+.+++|.+++... ....+++..+..++.|+++|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 999999999998643 235689999999999999999999999 9999999999999999999999999998754322
Q ss_pred CC-----------------------------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 001494 955 SS-----------------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFIS 1005 (1067)
Q Consensus 955 ~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~ 1005 (1067)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11 1113467889999999998889999999999999999999999986443
Q ss_pred cccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCC----HHHHHH
Q 001494 1006 LISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPT----MQKVSQ 1063 (1067)
Q Consensus 1006 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt----~~evl~ 1063 (1067)
.. .....+.......+... .....+.+++.+||+.+|++||+ +.|+++
T Consensus 237 ~~--------~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RD--------ETFSNILKKEVTFPGSP--PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hH--------HHHHHHhcCCccCCCcc--ccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 21 11222222222222211 13345899999999999999999 777765
No 259
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.2e-34 Score=321.91 Aligned_cols=254 Identities=24% Similarity=0.391 Sum_probs=200.3
Q ss_pred cCCCccCccccCCceeEEEEEEC--------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA--------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH 866 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 866 (1067)
.+|++.+.||+|+||.||+|+.. .+..||+|.+.... .....+++.+|+++++++ +||||+++++++.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 46888999999999999998642 12368999887432 223356789999999999 79999999999999
Q ss_pred CCceeEEEEeccCCCHHHHhcccC-------------ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCcee
Q 001494 867 AQHSFIVYEYLEMGSLAMILSNDA-------------AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVL 933 (1067)
Q Consensus 867 ~~~~~lv~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nil 933 (1067)
.+..++||||+++|+|.+++.... ....+++.+++.++.|++.|++|||++ +|+||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 166 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVL 166 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEE
Confidence 999999999999999999986432 223578899999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeccccceecCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccc
Q 001494 934 LDFKNEARVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSS 1010 (1067)
Q Consensus 934 l~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~ 1010 (1067)
++.++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--- 243 (334)
T cd05100 167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--- 243 (334)
T ss_pred EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH---
Confidence 999999999999999866432211 122234567999999998889999999999999999998 88887643321
Q ss_pred chhhhhhhhhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1011 SLNLNIALDEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1011 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+... ....+.. ...++.+++.+||+.+|++|||+.|+++.|+
T Consensus 244 -----~~~~~~~~~~~~~~~~~----~~~~l~~li~~cl~~~p~~Rps~~ell~~l~ 291 (334)
T cd05100 244 -----ELFKLLKEGHRMDKPAN----CTHELYMIMRECWHAVPSQRPTFKQLVEDLD 291 (334)
T ss_pred -----HHHHHHHcCCCCCCCCC----CCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 111111111 1111221 2235889999999999999999999999875
No 260
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2.2e-37 Score=335.32 Aligned_cols=369 Identities=29% Similarity=0.426 Sum_probs=290.6
Q ss_pred CCCcceEeccCCccc-cCCCCcccccCccceeecCCCcccCCCCcccccccccceecccccccccCCCCccccccccccc
Q 001494 72 FPHLAYLDLWSNQLF-GNIPPQIGNISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNL 150 (1067)
Q Consensus 72 ~~~l~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 150 (1067)
+|.++-.|+++|.++ +..|..+..++++++|.|...++. .+|..++.|.+|++|.+++|++. .+-.++..|+.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 455666777888887 468888888888888888888887 78888888888888888888887 666777888888888
Q ss_pred cccccccc-cccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccccC-CCCCcccccceeecccCc
Q 001494 151 ALYSNYLE-DIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIP-QSLGNLSNLAMLNLSSNS 228 (1067)
Q Consensus 151 ~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~ 228 (1067)
.+..|++. .-+|..+..+..|+.||||+|+++ ..|..+...+++.+|+|++|+|. .|| .-|-+|+.|-+||||+|+
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccch
Confidence 88888773 236777778888888888888888 78888888888888888888888 455 456688888888888888
Q ss_pred CCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEeccccc-ccCCCccccCCcccEEEeccccccCCccc
Q 001494 229 LFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLS-GLIPSEIGNLKFLSKIALSYNKFSGLIPH 307 (1067)
Q Consensus 229 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 307 (1067)
+. .+|+.+..|..|+.|+|++|.+...--..+..+++|++|.+++.+-+ .-+|..+.++.+|..+|+|.|.+. ..|+
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPe 239 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPE 239 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchH
Confidence 87 67777888888888888888776443344556677888888877644 346778888888888888888887 5678
Q ss_pred cccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeEEccCCcCc-cccCcccCCCCC
Q 001494 308 SLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLS-GSIPCEIGNLKS 386 (1067)
Q Consensus 308 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~ 386 (1067)
.+.++.+|+.|+|++|+|+... .......+|++|+||.|+++ .+|+++..++.|+.|++.+|+++ .-+|+.++.+..
T Consensus 240 cly~l~~LrrLNLS~N~iteL~-~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~ 317 (1255)
T KOG0444|consen 240 CLYKLRNLRRLNLSGNKITELN-MTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQ 317 (1255)
T ss_pred HHhhhhhhheeccCcCceeeee-ccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhh
Confidence 8888888888888888887653 34455667888888888888 78888888888888888888876 236888888888
Q ss_pred CCEEEccCCcccccCCCccccccCCcEEEcccCcCcccCchhhhCcCCCcEEeCCCCcccCCCC
Q 001494 387 LSYLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVKLTKLFLGDNQFQGPIP 450 (1067)
Q Consensus 387 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 450 (1067)
|+.+..++|++. ..|..++.|..|+.|.|+.|++- ..|+++.-++.|+.||+..|.-...+|
T Consensus 318 Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 318 LEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred hHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 888888888887 78888888888888888888876 678888888888888888886544333
No 261
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.4e-34 Score=317.73 Aligned_cols=257 Identities=27% Similarity=0.436 Sum_probs=202.8
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||+||+++. .+|+.||+|++.... .....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 5688889999999999999865 468899999886432 2234577899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... +.+++..+..++.+++.|+.|||+.. +++||||||+||+++.++.++|+|||++......
T Consensus 83 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 83 EFMDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred ecCCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999988543 35889999999999999999999732 8999999999999999999999999998754322
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc---chhhhhhhhhccCCC-CCCCC
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSS---SLNLNIALDEILDPR-LPIPS 1030 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~ 1030 (1067)
. .....|+..|+|||++.+..++.++|||||||++||+++|+.||+........ ..........+.... ...+.
T Consensus 158 ~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd06620 158 I--ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPS 235 (284)
T ss_pred c--cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCc
Confidence 1 22457899999999998888999999999999999999999998743321100 000111122222111 11111
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1031 HNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1031 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.+....+.+++.+|++.||++|||+.|+++.
T Consensus 236 ---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 236 ---SDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred ---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1233458899999999999999999999875
No 262
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.1e-33 Score=311.00 Aligned_cols=254 Identities=24% Similarity=0.440 Sum_probs=202.2
Q ss_pred cCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 869 (1067)
++|+..+.||+|+||.||+|+.+ +.+.||+|.+.... .....+++.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 46888899999999999999754 34679999876432 22245778999999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHhcccCcc------CCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEe
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAA------EDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVS 943 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~ 943 (1067)
.++||||+++|+|.+++...... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEc
Confidence 99999999999999999654322 2589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCC-CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhc
Q 001494 944 DFGIAKFLKPD-SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEI 1021 (1067)
Q Consensus 944 DfG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1021 (1067)
|||++...... ........++..|+|||.+.+..++.++||||||+++||+++ |..||...... ......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--------~~~~~~ 231 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--------EVLNRL 231 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--------HHHHHH
Confidence 99998754322 122334456788999999988888999999999999999998 78887533211 111111
Q ss_pred cCCC--CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1022 LDPR--LPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1022 ~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.... +..+.. ....+.+++.+||+.+|++|||+.|+++.|+
T Consensus 232 ~~~~~~~~~~~~----~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 QAGKLELPVPEG----CPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HcCCcCCCCCCC----CCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111 111111 2235889999999999999999999999875
No 263
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.4e-34 Score=320.49 Aligned_cols=260 Identities=18% Similarity=0.272 Sum_probs=197.5
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|...++||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.+++.++||||+++++++..++..++||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc--CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 57889999999999999999654 6889999998644322 22346778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++ +++..++... ...+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 e~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 84 EYLD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred eccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 9997 5888877532 33578899999999999999999999 9999999999999999999999999999765443
Q ss_pred CCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchh-------hhhhhhhccC---
Q 001494 955 SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN-------LNIALDEILD--- 1023 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~-------~~~~~~~~~~--- 1023 (1067)
........+++.|+|||.+.+. .++.++||||+||++|||++|+.||............ .......+..
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 3333445678999999987654 4788999999999999999999998654321100000 0000000000
Q ss_pred -CCCCCCC---cc----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1024 -PRLPIPS---HN----VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1024 -~~~~~~~---~~----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.....+. .. .......+.+++.+|++.||.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 00 0112235789999999999999999999986
No 264
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.7e-34 Score=315.08 Aligned_cols=247 Identities=28% Similarity=0.424 Sum_probs=199.6
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|++++++++||||+++++++......|+|||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 356678899999999999964 4688999999864322 2335678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|++++++.+++.. ..+++..+..++.|+++|++|||++ +++|+||+|+||+++.++.++++|||++.......
T Consensus 83 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 83 YLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred ccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 9999999998843 3578899999999999999999999 99999999999999999999999999998765433
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
.......++..|+|||++.+..++.++|||||||++|||++|+.|+....... ....+...... .....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~~~~~~~---~~~~~ 224 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--------VLFLIPKNSPP---TLEGQ 224 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--------HHhhhhcCCCC---CCCcc
Confidence 33334567889999999998889999999999999999999999975332211 00011111110 01112
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+.+++.+||+.+|++||++.++++
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 225 YSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 2345889999999999999999999987
No 265
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.3e-34 Score=319.44 Aligned_cols=194 Identities=22% Similarity=0.389 Sum_probs=158.5
Q ss_pred cCccccCCceeEEEEEEC---CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee--CCceeEEEE
Q 001494 801 EHCIGKGGQGSVYKVELA---SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH--AQHSFIVYE 875 (1067)
Q Consensus 801 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E 875 (1067)
+.+||+|+||.||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 467999999999999765 45789999986432 12457789999999999999999998854 457899999
Q ss_pred eccCCCHHHHhccc------CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceee----CCCCCeEEecc
Q 001494 876 YLEMGSLAMILSND------AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLL----DFKNEARVSDF 945 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill----~~~~~~kl~Df 945 (1067)
|+++ ++.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9875 666665321 1223578899999999999999999999 99999999999999 56678999999
Q ss_pred ccceecCCCCC---ccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCc
Q 001494 946 GIAKFLKPDSS---NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDF 1003 (1067)
Q Consensus 946 G~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~ 1003 (1067)
|+++....... ......||+.|+|||++.+. .++.++||||+||++|||+||+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 99987654322 22345789999999988764 578999999999999999999999864
No 266
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-34 Score=318.83 Aligned_cols=249 Identities=24% Similarity=0.359 Sum_probs=214.7
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
...|.+.+.||+|.|+.|..|++ .++..||+|.+.+....... .+.+.+|+++|+.++|||||+++.+......+|+|
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~-~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK-RQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH-HHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 35688899999999999999854 57999999999877655443 44589999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+.+|.+++++.+... +.+..+..++.|+.+|++|||++ .|||||||++||+++.+.++||+|||++..+.
T Consensus 134 ~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~- 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD- 206 (596)
T ss_pred EEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec-
Confidence 999999999999966554 44577888999999999999999 99999999999999999999999999999887
Q ss_pred CCCccccccccccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
......+++|++.|.|||++.+..| ++++|+||+|+++|-|+.|..|||+... .....+++...+.++...
T Consensus 207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l--------k~Lr~rvl~gk~rIp~~m 278 (596)
T KOG0586|consen 207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL--------KELRPRVLRGKYRIPFYM 278 (596)
T ss_pred ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc--------ccccchheeeeeccccee
Confidence 3455577899999999999998886 6799999999999999999999985432 333445566666666655
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..+ ..+++++++-.+|.+|++.+++.+
T Consensus 279 s~d----ce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 279 SCD----CEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ech----hHHHHHHhhccCccccCCHHHhhh
Confidence 555 778999999999999999999875
No 267
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.9e-34 Score=317.68 Aligned_cols=261 Identities=22% Similarity=0.358 Sum_probs=201.0
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..++||+|+||.||+|... +++.||+|++....... ...+.+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 36888899999999999999765 68999999986543322 33567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||++++++..+.... ..+++.++..++.|+++|++|||+. +++|||++|+||++++++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 80 EFVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred ecCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 999999998876432 3489999999999999999999999 9999999999999999999999999999876554
Q ss_pred CCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh------hhhh---------
Q 001494 955 SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL------NIAL--------- 1018 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~------~~~~--------- 1018 (1067)
........++..|+|||++.+. .++.++|||||||++|||++|+.||............. ....
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 154 GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 4444456688999999988653 47889999999999999999999986433211000000 0000
Q ss_pred -hhccCCCCCCCCc---chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1019 -DEILDPRLPIPSH---NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1019 -~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.....+....... ..+.....+.+++.+||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000011000000 00112345889999999999999999999875
No 268
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.5e-34 Score=317.15 Aligned_cols=248 Identities=27% Similarity=0.397 Sum_probs=199.3
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|.....||+|+||.||++.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++.+...+..|+||||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 44456799999999999965 468899999986432 22346688999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
++++++.+++.. ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.++|+|||++........
T Consensus 101 ~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 101 LEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 999999998843 2478899999999999999999999 999999999999999999999999999976544433
Q ss_pred ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHH
Q 001494 957 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEK 1036 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1067)
......|++.|+|||.+.+..++.++|||||||++|||++|+.||........ .........+...... ..
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~ 244 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-----MRRIRDNLPPRVKDSH----KV 244 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhcCCCcccccc----cc
Confidence 33456788999999999888899999999999999999999999864332111 1111112222221111 12
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1037 LISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1037 ~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
...+.+++.+||+.||.+|||+.|+++.
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 2347899999999999999999999864
No 269
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=6.7e-34 Score=315.44 Aligned_cols=258 Identities=27% Similarity=0.413 Sum_probs=200.9
Q ss_pred HHHHHhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeC
Q 001494 790 EIIRATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHA 867 (1067)
Q Consensus 790 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 867 (1067)
++..+.++|+..+.||+|+||.||+|.. .+++.+|+|++.... ....++.+|+.+++++ +|||++++++++...
T Consensus 16 ~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 16 SLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred cCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 3444568899999999999999999865 578899999986421 1245677899999988 799999999998654
Q ss_pred -----CceeEEEEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeE
Q 001494 868 -----QHSFIVYEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEAR 941 (1067)
Q Consensus 868 -----~~~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~k 941 (1067)
+..|+||||+++++|.++++.. .....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence 3589999999999999988532 2234689999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCccccccccccccCccccccCC-----CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhh
Q 001494 942 VSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK-----VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNI 1016 (1067)
Q Consensus 942 l~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~ 1016 (1067)
|+|||.+..............|+..|+|||.+.... ++.++|||||||++|||++|+.||........ ..
T Consensus 169 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-----~~ 243 (291)
T cd06639 169 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT-----LF 243 (291)
T ss_pred EeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-----HH
Confidence 999999987654433334456889999999876433 67899999999999999999999864332110 00
Q ss_pred hhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1017 ALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.......+....+. +....+.+++.+||+.+|++||++.|+++
T Consensus 244 ~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 244 KIPRNPPPTLLHPE----KWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHhcCCCCCCCccc----ccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 01111111111111 22335899999999999999999999986
No 270
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.3e-34 Score=317.52 Aligned_cols=262 Identities=22% Similarity=0.293 Sum_probs=200.1
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCC--ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPG--EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
+|+..+.||+|+||.||+|.. .+++.||+|++...... .......+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477788999999999999975 47899999999754332 122345677899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+ +++|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.++|+|||+++....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899999986433 3589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------hhhh------
Q 001494 954 DSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------IALD------ 1019 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~~~~------ 1019 (1067)
.........+++.|+|||.+.+ ..++.++|||||||++|||++|..||.............. ....
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 4444444566888999998765 4578899999999999999999877754332110000000 0000
Q ss_pred hccCCCC--CCC-CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1020 EILDPRL--PIP-SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1020 ~~~~~~~--~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
....... ..+ .........++.+++.+||+.+|++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000 000 00011223568899999999999999999999863
No 271
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.5e-34 Score=314.03 Aligned_cols=262 Identities=24% Similarity=0.395 Sum_probs=202.2
Q ss_pred cCCCccCccccCCceeEEEEEEC-----CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee--CC
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH--AQ 868 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 868 (1067)
+.|+..+.||+|+||.||+|+.. +++.||||++...... ...+++..|+++++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 45777899999999999999753 4788999998754332 346789999999999999999999999877 55
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIA 948 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a 948 (1067)
..++||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 7899999999999999996432 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccc---cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc------chhhhhhhh
Q 001494 949 KFLKPDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSS------SLNLNIALD 1019 (1067)
Q Consensus 949 ~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~------~~~~~~~~~ 1019 (1067)
........... ...++..|+|||...+..++.++||||||+++|||++|+.|+......... .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 87653322111 223456799999998888999999999999999999999997543211100 000011111
Q ss_pred hccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1020 EILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
+.+......+.. .....++.+++.+||+.+|++||||.||+++|+
T Consensus 237 ~~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05038 237 ELLKEGERLPRP--PSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281 (284)
T ss_pred HHHHcCCcCCCC--ccCCHHHHHHHHHHhccChhhCCCHHHHHHHHh
Confidence 111111111111 112245889999999999999999999999986
No 272
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.1e-34 Score=312.62 Aligned_cols=252 Identities=26% Similarity=0.411 Sum_probs=202.7
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|+||.||+|... +++.||+|++..... ....+++.+|++++++++||||+++++++......++|+|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 5778899999999999999765 689999999875432 2345778999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHN-DCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|+++++|.+++.... ..+++..+.+++.|++.|++|||+ . +++||||||+||+++.++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 80 YMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred ecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 999999999986432 568889999999999999999999 7 9999999999999999999999999998765432
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCC-CCCCCcch
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPR-LPIPSHNV 1033 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1033 (1067)
.. ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||......... .......+.... ...+..
T Consensus 155 ~~--~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-- 227 (265)
T cd06605 155 LA--KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG---IFELLQYIVNEPPPRLPSG-- 227 (265)
T ss_pred Hh--hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc---HHHHHHHHhcCCCCCCChh--
Confidence 21 1266888999999998889999999999999999999999998644211111 111112222211 111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....++.+++.+||..+|++|||+.++++
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 228 -KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 13345889999999999999999999975
No 273
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8.8e-34 Score=310.73 Aligned_cols=257 Identities=25% Similarity=0.423 Sum_probs=201.5
Q ss_pred CCCccCccccCCceeEEEEEECC--CcEEEEEEeCCCCC-------CChhHHHHHHHHHHHHhc-CCCCeeeeeeEEEee
Q 001494 797 DFDDEHCIGKGGQGSVYKVELAS--GEIIAVKKFHSPLP-------GEMTFQQEFLNEVKALTE-IRHRNIVKFYGFCSH 866 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~-------~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 866 (1067)
.|+..+.||+|+||.||+|.... ++.+|+|.+..... .......++..|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37788999999999999997654 78899998753221 122234557788888764 799999999999999
Q ss_pred CCceeEEEEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecc
Q 001494 867 AQHSFIVYEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDF 945 (1067)
Q Consensus 867 ~~~~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~Df 945 (1067)
++..++||||+++++|.+++... .....+++..++.++.|++.|+.|||+.. +++||||+|+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999887432 23346889999999999999999999631 8999999999999999999999999
Q ss_pred ccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCC
Q 001494 946 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPR 1025 (1067)
Q Consensus 946 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1067)
|.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... .....+....
T Consensus 159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~--------~~~~~~~~~~ 229 (269)
T cd08528 159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--------SLATKIVEAV 229 (269)
T ss_pred cceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--------HHHHHHhhcc
Confidence 9998765443 334567889999999999888999999999999999999999997533221 1111111111
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1026 LPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1026 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
...... .....++.+++.+||+.||++||++.|+.++++
T Consensus 230 ~~~~~~--~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 YEPLPE--GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCcCCc--ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111111 012235889999999999999999999999875
No 274
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.6e-34 Score=315.29 Aligned_cols=257 Identities=25% Similarity=0.390 Sum_probs=199.7
Q ss_pred HHHHHHhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEee
Q 001494 789 EEIIRATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH 866 (1067)
Q Consensus 789 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 866 (1067)
.+.......|+..+.||+|+||.||+|+. .+++.||+|++.... ....++..|+.+++++ +||||+++++++..
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 9 SALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 34444567889999999999999999975 568899999985431 2245678899999988 69999999999853
Q ss_pred ------CCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCe
Q 001494 867 ------AQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEA 940 (1067)
Q Consensus 867 ------~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~ 940 (1067)
....|+||||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~ 160 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEV 160 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCE
Confidence 457899999999999999886432 34578888999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCccccccccccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh
Q 001494 941 RVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN 1015 (1067)
Q Consensus 941 kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~ 1015 (1067)
+|+|||++..............|++.|+|||.+. ...++.++|||||||++|||++|+.||........
T Consensus 161 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~------ 234 (282)
T cd06636 161 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA------ 234 (282)
T ss_pred EEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh------
Confidence 9999999876543333344567899999999875 34578899999999999999999999854322111
Q ss_pred hhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1016 IALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+..... +..........+.+++.+||+.||.+|||+.|+++
T Consensus 235 --~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 235 --LFLIPRNPP--PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred --hhhHhhCCC--CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 011111110 00001122345899999999999999999999975
No 275
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.2e-33 Score=311.35 Aligned_cols=251 Identities=26% Similarity=0.450 Sum_probs=199.6
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCc----EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGE----IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
.+|+..+.||+|+||.||+|... +|+ .||+|....... .....++.+|+..+++++|||++++++++.. ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 56888899999999999998754 333 589998765432 3345678899999999999999999999987 788
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++||||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 84 ~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 9999999999999998543 23489999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCccc--cccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CC
Q 001494 951 LKPDSSNWT--ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RL 1026 (1067)
Q Consensus 951 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1026 (1067)
......... ...++..|+|||.+....++.++|+||||+++||+++ |+.||+...... ....+... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~ 230 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--------IPDLLEKGERL 230 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--------HHHHHhCCCCC
Confidence 654322211 1223568999999988889999999999999999998 999987543211 11111111 12
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..+.... ..+.+++.+||..+|.+||++.++++.|+
T Consensus 231 ~~~~~~~----~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~ 266 (279)
T cd05057 231 PQPPICT----IDVYMVLVKCWMIDAESRPTFKELINEFS 266 (279)
T ss_pred CCCCCCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 2222222 24789999999999999999999998875
No 276
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3e-34 Score=325.95 Aligned_cols=259 Identities=21% Similarity=0.317 Sum_probs=195.1
Q ss_pred HHhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC----
Q 001494 793 RATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA---- 867 (1067)
Q Consensus 793 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 867 (1067)
+..++|+..+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS-LIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh-hHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 3457899999999999999999964 57889999998754322 22345677899999999999999999987543
Q ss_pred --CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecc
Q 001494 868 --QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDF 945 (1067)
Q Consensus 868 --~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~Df 945 (1067)
...|++||++ ++++.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3568999988 6788887743 3489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchh-------hhhh
Q 001494 946 GIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN-------LNIA 1017 (1067)
Q Consensus 946 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~-------~~~~ 1017 (1067)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||............ ....
T Consensus 163 g~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 163 GLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred ccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999875432 344578999999999876 46889999999999999999999998643321100000 0000
Q ss_pred h--------hhccCCCCCCCCcchH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1018 L--------DEILDPRLPIPSHNVQ----EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1018 ~--------~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. ..........+..... .....+.+++.+|++.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 0000000000000000 11124789999999999999999999985
No 277
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-33 Score=312.47 Aligned_cols=260 Identities=27% Similarity=0.362 Sum_probs=200.0
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--CceeEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHSFIV 873 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 873 (1067)
+|+..++||.|++|.||+|.. .+++.||+|.+..... .....++.+|++++++++||||+++++++.+. +..++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 577889999999999999976 4688999999875422 23457789999999999999999999988653 478999
Q ss_pred EEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 874 YEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
|||+++++|.+++... .....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 9999999999887532 2234578899999999999999999999 99999999999999999999999999987554
Q ss_pred CCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
.... ....++..|+|||.+.+..++.++||||+||++|||++|+.||+.....................+.+......
T Consensus 157 ~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd06621 157 NSLA--GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN 234 (287)
T ss_pred cccc--ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCC
Confidence 3221 23457888999999988889999999999999999999999987543210011111111111111111111110
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.......+.+++.+||+.+|.+|||+.|+++
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1112345889999999999999999999986
No 278
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=7e-34 Score=309.63 Aligned_cols=238 Identities=25% Similarity=0.445 Sum_probs=187.9
Q ss_pred CccccCCceeEEEEEECCCc-----------EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 802 HCIGKGGQGSVYKVELASGE-----------IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
+.||+|+||.||+|...+.. .|++|.+.... .. ...+.+|+.++++++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46999999999999765332 47777765332 11 5778899999999999999999999988 788
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC-------CeEEe
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN-------EARVS 943 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~-------~~kl~ 943 (1067)
++||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++ .+|++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 99999999999999996433 2588999999999999999999999 999999999999999888 79999
Q ss_pred ccccceecCCCCCccccccccccccCccccccC--CCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhh
Q 001494 944 DFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDE 1020 (1067)
Q Consensus 944 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1020 (1067)
|||+++.... .....++..|+|||++.+. .++.++|||||||++|||++ |..|+........ .....
T Consensus 151 Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-----~~~~~- 220 (259)
T cd05037 151 DPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-----ERFYQ- 220 (259)
T ss_pred CCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-----HHHHh-
Confidence 9999986543 1234567789999998876 78999999999999999999 5777654321100 00000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1021 ILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+.+. . ..+.+++.+||+.+|++|||+.++++.|+
T Consensus 221 -~~~~~~~~~--~----~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 -DQHRLPMPD--C----AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -cCCCCCCCC--c----hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111111111 1 45889999999999999999999999874
No 279
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.6e-34 Score=337.06 Aligned_cols=259 Identities=18% Similarity=0.207 Sum_probs=189.0
Q ss_pred HHHHhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC------CCeeeeeeEE
Q 001494 791 IIRATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR------HRNIVKFYGF 863 (1067)
Q Consensus 791 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~ 863 (1067)
+.....+|++.++||+|+||+||+|.. .+++.||||++.... ....++..|+++++.++ |++++.++++
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 334567899999999999999999965 468899999986421 12334556666666654 4568999998
Q ss_pred EeeC-CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCceeeCCCC---
Q 001494 864 CSHA-QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHN-DCFPPIVHRDISSKNVLLDFKN--- 938 (1067)
Q Consensus 864 ~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDlk~~Nill~~~~--- 938 (1067)
+..+ ++.|+|||++ ++++.+++... ..+++..+..|+.||+.||+|||+ . +||||||||+|||++.++
T Consensus 200 ~~~~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 200 FQNETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred EEcCCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccc
Confidence 8765 5789999988 66787777433 358999999999999999999997 5 999999999999998766
Q ss_pred -------------CeEEeccccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 001494 939 -------------EARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFIS 1005 (1067)
Q Consensus 939 -------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~ 1005 (1067)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||+...
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 49999999886432 22345689999999999999999999999999999999999999997543
Q ss_pred cccccchhh-------hhh--------hhhccCC--CC--CCCCc-----------chHHHHHHHHHHHHhccCCCCCCC
Q 001494 1006 LISSSSLNL-------NIA--------LDEILDP--RL--PIPSH-----------NVQEKLISFVEVAISCLDESPESR 1055 (1067)
Q Consensus 1006 ~~~~~~~~~-------~~~--------~~~~~~~--~~--~~~~~-----------~~~~~~~~l~~li~~cl~~dP~~R 1055 (1067)
......... ..+ ...+... .+ ...+. ........+.+|+.+||+.||++|
T Consensus 350 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R 429 (467)
T PTZ00284 350 NLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKR 429 (467)
T ss_pred hHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhC
Confidence 211100000 000 0000000 00 00000 000112357899999999999999
Q ss_pred CCHHHHHH
Q 001494 1056 PTMQKVSQ 1063 (1067)
Q Consensus 1056 pt~~evl~ 1063 (1067)
||+.|+++
T Consensus 430 ~ta~e~L~ 437 (467)
T PTZ00284 430 LNARQMTT 437 (467)
T ss_pred CCHHHHhc
Confidence 99999986
No 280
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.6e-33 Score=307.96 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=194.8
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCC--ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--Cce
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPG--EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHS 870 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 870 (1067)
.+|+..+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688899999999999999965 56899999988643221 223345688899999999999999999988653 577
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
+++|||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY---GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 8999999999999998543 3478899999999999999999999 999999999999999999999999999976
Q ss_pred cCCCC---CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 951 LKPDS---SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 951 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
..... .......++..|+|||.+.+..++.++||||+||++|||++|+.||........ ..........+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~-- 229 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA----IFKIATQPTNPQ-- 229 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH----HHHHhcCCCCCC--
Confidence 54321 122335578899999999888899999999999999999999999864322110 000000111111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.+. .....+.+++ +||..+|++||++.|+++
T Consensus 230 ~~~----~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 230 LPS----HISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred Cch----hcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 111 1223366676 688899999999999975
No 281
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5.2e-34 Score=318.34 Aligned_cols=255 Identities=23% Similarity=0.279 Sum_probs=198.4
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|+||.||++... +++.||+|.+...........+.+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999654 67899999986543222334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNI---GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 999999999999543 3588999999999999999999999 9999999999999999999999999998642110
Q ss_pred CC---------------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhh
Q 001494 955 SS---------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALD 1019 (1067)
Q Consensus 955 ~~---------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 1019 (1067)
.. ......++..|+|||.+.+..++.++|+|||||++|||++|+.||..... .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--------~~~~~ 226 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELFG 226 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHH
Confidence 00 01123578889999999888899999999999999999999999863321 11111
Q ss_pred hccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1020 EILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
.........+... ......+.+++.+||+.+|++||++.++.+.+
T Consensus 227 ~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 227 QVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred HHHhcccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 2211111111110 11233488999999999999999965555544
No 282
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=309.86 Aligned_cols=250 Identities=24% Similarity=0.267 Sum_probs=202.4
Q ss_pred hcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
.+.|..-++||+||||.||.++ ..+|+.||.|++.+........+...+.|-.++.+++.+.||.+--+|+.++.+++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 4568888999999999999986 457999999887654333333345577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
+..|.||+|..++.+.+. ..+++..+.-++.+|+.||++||+. +||+||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 264 LtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999988876554 4589999999999999999999999 999999999999999999999999999998764
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
. ......+||.+|||||++.++.|+...|.||+||++|||+.|+.||.....- ....+..+.+.... .+..
T Consensus 340 g-~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK----vk~eEvdrr~~~~~----~ey~ 410 (591)
T KOG0986|consen 340 G-KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK----VKREEVDRRTLEDP----EEYS 410 (591)
T ss_pred C-CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh----hhHHHHHHHHhcch----hhcc
Confidence 4 3445569999999999999999999999999999999999999998632211 11111112222222 2222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCC
Q 001494 1034 QEKLISFVEVAISCLDESPESRPT 1057 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt 1057 (1067)
...+.+..++.+..|++||.+|--
T Consensus 411 ~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 411 DKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred cccCHHHHHHHHHHHccCHHHhcc
Confidence 334445788888999999999963
No 283
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.5e-33 Score=308.92 Aligned_cols=252 Identities=26% Similarity=0.421 Sum_probs=198.1
Q ss_pred cCCCccCccccCCceeEEEEEECC----CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCcee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELAS----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSF 871 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 871 (1067)
.+|...++||+|+||.||+|...+ ...||+|....... ....+.+.+|+.++++++||||+++++++.+ +..|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 457888999999999999997543 24689998865432 3345678999999999999999999998875 5678
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+||||+++++|.+++... ...+++.++..++.+++.|++|||+. +++||||||+||+++.++.+|++|||+++..
T Consensus 83 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 83 IVMELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 999999999999999543 23589999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCc-cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCC
Q 001494 952 KPDSSN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIP 1029 (1067)
Q Consensus 952 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1067)
...... .....++..|+|||.+....++.++||||||+++||+++ |+.||........ ...... ......+
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~-----~~~~~~--~~~~~~~ 230 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV-----IGRIEN--GERLPMP 230 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH-----HHHHHc--CCcCCCC
Confidence 543211 122234568999999988889999999999999999996 9999864432110 011111 1122222
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
... ..++.+++.+|+..+|++|||+.++++.|+
T Consensus 231 ~~~----~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 231 PNC----PPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263 (270)
T ss_pred CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 222 235889999999999999999999998875
No 284
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.2e-33 Score=308.80 Aligned_cols=253 Identities=30% Similarity=0.415 Sum_probs=202.6
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee--CCceeEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH--AQHSFIV 873 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv 873 (1067)
+|+..+.||.|+||.||+|.. .+++.||+|++..... .....+++..|++++++++||||+++++++.. +...+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 477889999999999999864 5788999999865432 23335678899999999999999999998754 4567999
Q ss_pred EEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHH-----hCCCCCeeecCCCCCceeeCCCCCeEEecccc
Q 001494 874 YEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLH-----NDCFPPIVHRDISSKNVLLDFKNEARVSDFGI 947 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~ 947 (1067)
|||+++++|.+++... .....+++..++.++.|++.|++||| +. +++||||||+||+++.++.+|++|||+
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~ 156 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGL 156 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccc
Confidence 9999999999998643 22456899999999999999999999 66 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 948 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 948 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
+..............+++.|+|||.+.+..++.++||||||+++|+|++|+.||+..... .....+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~ 228 (265)
T cd08217 157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--------QLASKIKEGKFR 228 (265)
T ss_pred cccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--------HHHHHHhcCCCC
Confidence 987765443344567899999999998888999999999999999999999998743311 111112222111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
..+ ......+.+++.+|++.+|++||++.+|++.
T Consensus 229 ~~~---~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 RIP---YRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCc---cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 111 1223458899999999999999999999863
No 285
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.5e-34 Score=315.38 Aligned_cols=247 Identities=26% Similarity=0.413 Sum_probs=198.2
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|+....||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.++|||++++++++..++..|+||||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 34456799999999999965 4789999999864322 2246688999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++++|..++.. ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 100 ~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 100 LQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred CCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence 999999988743 3478999999999999999999999 999999999999999999999999999976554433
Q ss_pred ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHH
Q 001494 957 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEK 1036 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1067)
......|++.|+|||++.+..++.++|||||||++|||++|+.||......... ........+...... ..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~ 243 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-----KRLRDSPPPKLKNAH----KI 243 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHHhccCCCCccccC----CC
Confidence 344567899999999998888999999999999999999999998643321110 011111111111111 12
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1037 LISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1037 ~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+.+++.+||+.+|++||++.++++
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 234789999999999999999999987
No 286
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2e-33 Score=306.97 Aligned_cols=252 Identities=30% Similarity=0.463 Sum_probs=201.9
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|+||.||+|.. .+++.||+|.+...... ....+++.+|++++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 478889999999999999965 47899999998755332 3456789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++... ..+++..+..++.++++|++|||+. +|+|+||+|+||+++.++.+||+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 80 YCSGGTLEELLEHG---RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred cCCCCcHHHHHhhc---CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 99999999998643 3478889999999999999999999 99999999999999999999999999998765433
Q ss_pred Ccc----ccccccccccCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCC
Q 001494 956 SNW----TELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPI 1028 (1067)
Q Consensus 956 ~~~----~~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1067)
... ....+++.|+|||++.+.. ++.++||||||+++||+++|+.||....... ........ ......
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~----~~~~~~~~--~~~~~~ 227 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF----QIMFHVGA--GHKPPI 227 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH----HHHHHHhc--CCCCCC
Confidence 322 2356788999999988766 8899999999999999999999986432111 00001111 111112
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+.. ......+.+++.+||+.+|++|||+.|++.
T Consensus 228 ~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 PDS--LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred Ccc--cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 211 112335789999999999999999999875
No 287
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.7e-34 Score=322.53 Aligned_cols=191 Identities=22% Similarity=0.343 Sum_probs=163.5
Q ss_pred HhcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeE
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 872 (1067)
....|++.+.||+|+||.||+|+.. +++.||+|+.... ....|+.++++++||||+++++++.+.+..++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 3467999999999999999999764 5788999975421 23468999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
||||+. +++.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.++...
T Consensus 135 v~e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 208 (357)
T PHA03209 135 VLPHYS-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPV 208 (357)
T ss_pred EEEccC-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccc
Confidence 999996 577777743 234589999999999999999999999 99999999999999999999999999997533
Q ss_pred CCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1000 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p 1000 (1067)
.. .......||+.|+|||++.+..++.++|||||||++|||+++..|
T Consensus 209 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 209 VA-PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred cC-cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 22 223346789999999999999999999999999999999986555
No 288
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.2e-33 Score=306.80 Aligned_cols=246 Identities=28% Similarity=0.461 Sum_probs=196.7
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
++|++.+.||+|+||.||++.. +++.||+|++.... ..+.+.+|+.++++++|||++++++++... ..++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e 78 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVME 78 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEE
Confidence 4588899999999999999864 57889999986431 235788999999999999999999998764 4799999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 79 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~- 153 (254)
T cd05083 79 LMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG- 153 (254)
T ss_pred CCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc-
Confidence 999999999986433 33578999999999999999999999 9999999999999999999999999999764322
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
......+..|+|||.+.+..++.++|||||||++|||++ |+.||........ ........ ....+.
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~~--~~~~~~---- 220 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV-----KECVEKGY--RMEPPE---- 220 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH-----HHHHhCCC--CCCCCC----
Confidence 122334568999999988889999999999999999998 9999864432110 11111111 111111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
..+.++.+++.+||+.+|++||+++++++.|+
T Consensus 221 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 221 GCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 22345889999999999999999999999875
No 289
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9e-34 Score=314.49 Aligned_cols=260 Identities=18% Similarity=0.308 Sum_probs=195.5
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|++|.||+|... +++.||+|.+....... ....+.+|++++++++||||+++++++.+++..++||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG--APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC--CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 67889999999999999999765 68999999987543222 1245678999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++ +|.+++.... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 83 EYLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred ecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 99985 8888875432 3578999999999999999999999 9999999999999999999999999998765433
Q ss_pred CCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccc-chh-------hhhhhhhc----
Q 001494 955 SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSS-SLN-------LNIALDEI---- 1021 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~-~~~-------~~~~~~~~---- 1021 (1067)
........++..|+|||++.+ ..++.++||||+||++|||++|+.||......... ... .......+
T Consensus 157 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 222333456888999998865 45789999999999999999999998643311000 000 00000000
Q ss_pred --cCCCCCC--CCcc-----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1022 --LDPRLPI--PSHN-----VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1022 --~~~~~~~--~~~~-----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....... +... .......+.+++.+|++.+|++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000 0000 0001135789999999999999999999875
No 290
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.1e-33 Score=306.83 Aligned_cols=254 Identities=30% Similarity=0.459 Sum_probs=207.1
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|++|.||+|+.. +++.||+|++...... ...+.+..|+..+++++|||++++++++...+..++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 36888899999999999999765 5999999998754322 34678999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHN-DCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
||+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 79 EYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred EecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 999999999999643 458999999999999999999999 8 999999999999999999999999999987765
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.........++..|+|||.+.+..++.++||||||+++|||++|+.||...... ........+...........
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~- 226 (264)
T cd06623 153 TLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP-----SFFELMQAICDGPPPSLPAE- 226 (264)
T ss_pred CCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc-----CHHHHHHHHhcCCCCCCCcc-
Confidence 444434567889999999998888999999999999999999999998654320 11111222222111111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.....+.+++.+||+.+|++||++.|+++.
T Consensus 227 -~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 227 -EFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 023458999999999999999999999863
No 291
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.3e-33 Score=309.80 Aligned_cols=255 Identities=26% Similarity=0.418 Sum_probs=198.5
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCC-------ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPG-------EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ 868 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 868 (1067)
+|...+.||+|+||.||+|.. .+|+.||+|.+...... .....+.+.+|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999964 47899999988542111 1112346788999999999999999999999999
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIA 948 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a 948 (1067)
..++||||+++++|.+++... ..+++..+..++.|++.|+.|||++ +++||||+|+||+++.++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999998654 4588899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC--ccccccccccccCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC
Q 001494 949 KFLKPDSS--NWTELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP 1024 (1067)
Q Consensus 949 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1024 (1067)
+....... ......|+..|+|||.+.... ++.++||||+|+++||+++|..||......... ...... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~--~~ 229 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAM----FKLGNK--RS 229 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHH----HHhhcc--cc
Confidence 76543211 123346788999999887654 789999999999999999999998533221100 000000 11
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1025 RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1025 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+.....+...++.+++.+||+.+|++|||+.+|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 230 APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 111122222223456899999999999999999999986
No 292
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.3e-33 Score=309.29 Aligned_cols=248 Identities=26% Similarity=0.444 Sum_probs=195.0
Q ss_pred CccccCCceeEEEEEECC-------CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 802 HCIGKGGQGSVYKVELAS-------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
+.||+|+||.||+|+..+ ++.||+|.+..... .....++.+|+.+++.++||||+++++++...+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 469999999999987542 25799998764321 233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccC----ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC-----CeEEecc
Q 001494 875 EYLEMGSLAMILSNDA----AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN-----EARVSDF 945 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~-----~~kl~Df 945 (1067)
||+++++|.+++.... ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .++++||
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999999999986422 223478899999999999999999999 999999999999999887 8999999
Q ss_pred ccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhcc
Q 001494 946 GIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEIL 1022 (1067)
Q Consensus 946 G~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1022 (1067)
|+++....... ......++..|+|||++.++.++.++|||||||++|||++ |+.||....... ....+.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--------~~~~~~ 227 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--------VLQHVT 227 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--------HHHHHh
Confidence 99976543221 1122345678999999998899999999999999999998 999986432211 111111
Q ss_pred C-CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1023 D-PRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1023 ~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
. .....+. ..+..+.+++.+||..+|++||++.++++.|+
T Consensus 228 ~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 228 AGGRLQKPE----NCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cCCccCCcc----cchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1 1111121 12345889999999999999999999999885
No 293
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.3e-33 Score=305.32 Aligned_cols=250 Identities=30% Similarity=0.479 Sum_probs=199.1
Q ss_pred CCccCccccCCceeEEEEEECC-----CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeE
Q 001494 798 FDDEHCIGKGGQGSVYKVELAS-----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 872 (1067)
+++.+.||+|+||.||+++... +..||+|++...... ...+.+..|++.++.++||||+++++++.+.+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE--QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 3567889999999999997653 488999998654222 245788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
+|||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.++...
T Consensus 79 i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecc
Confidence 9999999999999854322 1289999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccc-cccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCC-CCCCC
Q 001494 953 PDSSNWT-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDP-RLPIP 1029 (1067)
Q Consensus 953 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1029 (1067)
....... ...+++.|+|||.+.+..++.++||||+|+++|||++ |+.||+.... ......+... ....+
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~ 226 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--------EEVLEYLKKGYRLPKP 226 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCCCCCC
Confidence 4422211 2336789999999988889999999999999999998 7888764221 1111111111 11112
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
.. ...++.+++.+|+..+|++|||+.|+++.|
T Consensus 227 ~~----~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 227 EN----CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred Cc----CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 22 233588999999999999999999999875
No 294
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.5e-34 Score=309.66 Aligned_cols=251 Identities=27% Similarity=0.351 Sum_probs=204.3
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..++||+|+||.||+|+.. +++.||+|++...........+.+.+|++++++++||||+++++++.++...++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999765 689999999975443333456789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999998543 4588999999999999999999999 99999999999999999999999999998765432
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||+...... ...............+..
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~---- 224 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI-----RDQIRAKQETADVLYPAT---- 224 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH-----HHHHHHHhccccccCccc----
Confidence 2334567889999999988889999999999999999999999987544210 111111111122222222
Q ss_pred HHHHHHHHHHhccCCCCCCCCCH--HHHHH
Q 001494 1036 KLISFVEVAISCLDESPESRPTM--QKVSQ 1063 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~--~evl~ 1063 (1067)
....+.+++.+||+.||++||++ +|+++
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 225 WSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred CcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 22458899999999999999999 77653
No 295
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.9e-33 Score=313.47 Aligned_cols=252 Identities=25% Similarity=0.415 Sum_probs=196.3
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCc----EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGE----IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
.+|+..+.||+|+||.||+|.. .+|+ .||+|.+.... ......++.+|+.+++.++||||+++++++... ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 5678889999999999999965 3454 47888876432 223345788999999999999999999998754 56
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++++||+++|++.+++... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeeehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 7999999999999998542 23578899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc--cccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 951 LKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 951 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
....... .....++..|+|||.+.+..++.++|||||||++|||++ |+.||........ ...... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~--~~~~~ 231 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-----PDLLEK--GERLP 231 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHC--CCCCC
Confidence 6533221 122345678999999988889999999999999999997 8999864322110 001110 11111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+.. ....+.+++.+||..+|++||++.++++.|+
T Consensus 232 ~~~~----~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 232 QPPI----CTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred CCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 1235889999999999999999999998875
No 296
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.2e-33 Score=310.68 Aligned_cols=254 Identities=26% Similarity=0.406 Sum_probs=200.6
Q ss_pred HhcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCC---
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQ--- 868 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~--- 868 (1067)
.+++|+..+.||+|+||.||+|... +++.||+|++.... ...+++.+|+.+++++ +||||+++++++.+..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 4578999999999999999999764 67899999986432 1346788999999999 7999999999997654
Q ss_pred ---ceeEEEEeccCCCHHHHhcccC-ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEec
Q 001494 869 ---HSFIVYEYLEMGSLAMILSNDA-AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSD 944 (1067)
Q Consensus 869 ---~~~lv~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~D 944 (1067)
..|+||||+++++|.+++.... ....+++..+..++.|++.|++|||++ +++||||+|+||+++.++.+|++|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 4899999999999999886432 235689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccccccccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhh
Q 001494 945 FGIAKFLKPDSSNWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALD 1019 (1067)
Q Consensus 945 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 1019 (1067)
||.+..............|++.|+|||++.. ..++.++||||+||++|||++|+.||....... ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~~ 228 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--------ALF 228 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--------HHH
Confidence 9999876544444445678899999998753 346789999999999999999999986332111 111
Q ss_pred hccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1020 EILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
++...... ..........++.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 229 KIPRNPPP-TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HhhccCCC-CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111100 00111123346889999999999999999999986
No 297
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.7e-33 Score=309.94 Aligned_cols=248 Identities=26% Similarity=0.457 Sum_probs=199.9
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC---CCeeeeeeEEEeeCCceeE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR---HRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~l 872 (1067)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+++.+|+.++++++ |||++++++++.++...++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP--DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC--chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 467788999999999999975 5789999999865422 223467888999999886 9999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
||||+++++|.+++... .+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++++|||.+....
T Consensus 80 v~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999999988542 588999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCc
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSH 1031 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1067)
..........|+..|+|||.+.++ .++.++|||||||++|+|++|+.||+........ ........+.+ +..
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-----~~~~~~~~~~~--~~~ 225 (277)
T cd06917 153 QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM-----MLIPKSKPPRL--EDN 225 (277)
T ss_pred CCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh-----hccccCCCCCC--Ccc
Confidence 554444556788999999987654 4688999999999999999999998643321110 00011111111 111
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....++.+++.+||+.||++||++.|+++
T Consensus 226 ---~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 226 ---GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ---cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 12345889999999999999999999975
No 298
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.2e-33 Score=313.30 Aligned_cols=262 Identities=20% Similarity=0.276 Sum_probs=195.5
Q ss_pred HhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeE
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 872 (1067)
++.+|...+.||+|+||.||+|.. .+++.||+|++....... ....+.+|+.+++.++|+||+++++++.+++..|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG--VPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC--CcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 356799999999999999999965 578999999986543222 23456789999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
||||++ +++..++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 v~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 81 VFEYMH-TDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred EEeccc-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 999996 5666555322 23477888899999999999999999 99999999999999999999999999997654
Q ss_pred CCCCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchh--------hhh-------
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN--------LNI------- 1016 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~--------~~~------- 1016 (1067)
..........+++.|+|||.+.+. .++.++||||+||++|||++|+.||+........... ...
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 433333445678999999988754 4788999999999999999999998754321000000 000
Q ss_pred ---hhhhccCCCCCCCCc---chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1017 ---ALDEILDPRLPIPSH---NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1017 ---~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
............... .......++.+++.+|++.||.+|||+.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000000 00001235789999999999999999999875
No 299
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.9e-33 Score=304.64 Aligned_cols=250 Identities=26% Similarity=0.397 Sum_probs=200.3
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCC--ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPG--EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
+|+..+.||+|+||.||+|... +++.||+|.+...... .....+.+.+|+++++.++||||+++++++.++...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677899999999999999765 7899999998653321 223456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999998543 3478999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
.. ......+++.|+|||.+.... ++.++|+|||||++|+|++|+.||......... ...... ......+..
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~-----~~~~~~-~~~~~~~~~- 226 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV-----FKIGRS-KELPPIPDH- 226 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH-----HHHHhc-ccCCCcCCC-
Confidence 32 234456888999999887766 899999999999999999999998643311100 000000 011111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+.+++.+||+.+|++||++.++++
T Consensus 227 ---~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 227 ---LSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ---cCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 2234789999999999999999999975
No 300
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6.8e-34 Score=314.30 Aligned_cols=260 Identities=20% Similarity=0.319 Sum_probs=195.2
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|+||.||+|+.. +|+.||+|++...... ......+.+|++++++++||||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc-ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 4778899999999999999764 7899999998654222 1223567789999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++ ++.+++... ...+++..+..++.||++|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 80 ~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 80 YCDQ-DLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred cCCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 9975 677666432 24589999999999999999999999 99999999999999999999999999998765443
Q ss_pred CccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCccccccccchhh--------hh---hhhhccC
Q 001494 956 SNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL--------NI---ALDEILD 1023 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~--------~~---~~~~~~~ 1023 (1067)
.......+++.|+|||.+.+.. ++.++||||+||++|||+||+.|+............. .. ...+..+
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 3344456788999999887654 6899999999999999999998853211110000000 00 0000000
Q ss_pred -CCCCCCCc------chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1024 -PRLPIPSH------NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1024 -~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
........ .......++.+++.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000 00112345789999999999999999999976
No 301
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.4e-33 Score=307.37 Aligned_cols=247 Identities=28% Similarity=0.416 Sum_probs=200.5
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
-|+..++||+|+||.||+|.. .+++.||+|...... .....+.+.+|+.++++++||||+++++++.+++..|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 467788999999999999965 578899999876432 22345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|++++++.+++.. ..+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 83 ~~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 83 YLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred eCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 9999999998853 3478999999999999999999999 99999999999999999999999999998765443
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
.......++..|+|||.+.+..++.++|||||||++|||++|..||....... ....+.....+ .....
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~---~~~~~ 224 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--------VLFLIPKNNPP---TLEGN 224 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--------HHHHHhcCCCC---CCCcc
Confidence 33344567889999999988888999999999999999999999986432211 11111111111 01112
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...++.+++.+||+.+|.+||++.++++
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 225 YSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 2345889999999999999999999987
No 302
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.3e-33 Score=305.41 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=196.2
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCC--CChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--Cce
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLP--GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHS 870 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 870 (1067)
.+|+..+.||+|+||.||+|.. .+++.||+|.+..... ......+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999999965 4689999998854321 1223346788899999999999999999988764 467
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++||||+++++|.+++... ..+++..+.+++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||.++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 8999999999999998543 3478888999999999999999999 999999999999999999999999999976
Q ss_pred cCCCC---CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC-CC
Q 001494 951 LKPDS---SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP-RL 1026 (1067)
Q Consensus 951 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1026 (1067)
..... .......++..|+|||.+.+..++.++|||||||++|||++|+.||....... ........+ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~ 228 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-------AIFKIATQPTNP 228 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-------HHHHHhcCCCCC
Confidence 54221 12234568889999999988889999999999999999999999986432211 001111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..+ ......+.+++.+|+. +|++||+++|+++
T Consensus 229 ~~~----~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 229 VLP----PHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CCc----hhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 111 2233457889999994 9999999999986
No 303
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=288.22 Aligned_cols=253 Identities=23% Similarity=0.269 Sum_probs=210.3
Q ss_pred HhcCCCc-cCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEee----
Q 001494 794 ATNDFDD-EHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH---- 866 (1067)
Q Consensus 794 ~~~~~~~-~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~---- 866 (1067)
.+++|.+ .++||-|-.|.|..+ ..++++.+|+|++... ....+|++..-.. .|||||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 4566765 367999999999987 5668999999998642 3445788875555 69999999999854
Q ss_pred CCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC---CeEEe
Q 001494 867 AQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN---EARVS 943 (1067)
Q Consensus 867 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~---~~kl~ 943 (1067)
...+.+|||.|+||.|...++..+ ...+++.++..|++||+.|+.|||+. +|.||||||+|+|...++ .+|++
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g-~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRG-DQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEec
Confidence 457789999999999999997544 45689999999999999999999999 999999999999997553 59999
Q ss_pred ccccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccC
Q 001494 944 DFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD 1023 (1067)
Q Consensus 944 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1023 (1067)
|||+|+.... .....+.+-||.|.|||++...+|+...|+||+||++|-|++|.+||-..... ........++..
T Consensus 207 DfGFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~----aispgMk~rI~~ 281 (400)
T KOG0604|consen 207 DFGFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKRRIRT 281 (400)
T ss_pred ccccccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc----cCChhHHhHhhc
Confidence 9999987553 34556788899999999999999999999999999999999999997532221 112234456677
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1024 PRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1024 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+.+.+|.+.+.+.++...++|+.+|..+|.+|.|+.|+++
T Consensus 282 gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 282 GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 8888899999999999999999999999999999999875
No 304
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.8e-34 Score=336.01 Aligned_cols=253 Identities=29% Similarity=0.454 Sum_probs=198.1
Q ss_pred HhcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee------
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH------ 866 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 866 (1067)
-..+|++.+.||+||||.||+++.+ ||+.||||++.... .......+.+|++.+++++|||||+++..+.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 3467888899999999999999865 89999999997654 33345678899999999999999998743210
Q ss_pred --------------------------------------------------------------------------------
Q 001494 867 -------------------------------------------------------------------------------- 866 (1067)
Q Consensus 867 -------------------------------------------------------------------------------- 866 (1067)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -------------------------C--------CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHH
Q 001494 867 -------------------------A--------QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSY 913 (1067)
Q Consensus 867 -------------------------~--------~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~ 913 (1067)
+ ..+||-||||+..++.+++++..... ....+++++++|+.|++|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence 0 12488999999988888886544322 346778999999999999
Q ss_pred HHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC------------------CCCCccccccccccccCcccccc
Q 001494 914 LHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK------------------PDSSNWTELAGTYGYVAPELAYT 975 (1067)
Q Consensus 914 LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~------------------~~~~~~~~~~gt~~y~aPE~~~~ 975 (1067)
+|+. |||||||||.||++|+++.|||+|||+|+... ......+..+||.-|+|||.+.+
T Consensus 713 IH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 9999 99999999999999999999999999998621 11224567889999999999876
Q ss_pred CC---CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCC
Q 001494 976 MK---VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESP 1052 (1067)
Q Consensus 976 ~~---~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 1052 (1067)
.. |+.|+|+||+|||++||+.. |.. .......+....++.++.+.....+....-.++|+.+++.||
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~yP---F~T-------sMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP 859 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLYP---FGT-------SMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDP 859 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhcc---CCc-------hHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCC
Confidence 54 99999999999999999874 321 122233344455666665533344444456789999999999
Q ss_pred CCCCCHHHHHH
Q 001494 1053 ESRPTMQKVSQ 1063 (1067)
Q Consensus 1053 ~~Rpt~~evl~ 1063 (1067)
.+||||.|++.
T Consensus 860 ~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 860 SKRPTATELLN 870 (1351)
T ss_pred ccCCCHHHHhh
Confidence 99999999985
No 305
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=346.70 Aligned_cols=252 Identities=29% Similarity=0.437 Sum_probs=204.6
Q ss_pred cCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
-+++.+..||.|.||.||.| ...+|+..|+|-+...... ....+...+|..++..++|||+|+++|+-.+.+..+|.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 35677889999999999997 5778999999988754333 344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|||++|+|.+.+.+.+. .++.....+..|++.|++|||++ |||||||||.||+++.+|.+|.+|||.|..+...
T Consensus 1314 EyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 99999999999966543 45555567889999999999999 9999999999999999999999999999988765
Q ss_pred CCc----cccccccccccCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 955 SSN----WTELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 955 ~~~----~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
... .....||+.|||||++.+.. ...++||||+||++.||+||+.||...+..+...+... ......
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~------~gh~Pq 1461 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVA------AGHKPQ 1461 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHh------ccCCCC
Confidence 432 34578999999999998654 56789999999999999999999876554332222111 111222
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
+|.. ...+-.+++.+|+..||++|.++.|+++.
T Consensus 1462 ~P~~----ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1462 IPER----LSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred Cchh----hhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 2322 33457899999999999999999988763
No 306
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=8.7e-37 Score=330.71 Aligned_cols=370 Identities=29% Similarity=0.390 Sum_probs=324.4
Q ss_pred cccCccceeecCCCccc-CCCCcccccccccceecccccccccCCCCccccccccccccccccccccccCCCccCCCccc
Q 001494 94 GNISKLKYLDLSSNLFS-GAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLV 172 (1067)
Q Consensus 94 ~~l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 172 (1067)
+-|+..+-.|+|+|.|+ +.+|..+..+++++.|.|...++. .+|.+++.|.+|+.|.+++|++.. +-..+..|+.|+
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLR 81 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhH
Confidence 44566788999999999 679999999999999999999998 899999999999999999999987 456789999999
Q ss_pred EEEEeccCCcC-ccCCccccccccceecccccccccccCCCCCcccccceeecccCcCCCCCCcc-cCCcccCCceEecC
Q 001494 173 TLCLYNNLLSG-SIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSE-LGNLKYLSDLKLAD 250 (1067)
Q Consensus 173 ~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~ 250 (1067)
.+++..|++.. -+|..+..|+.|..|+|++|+++ ..|..+..-+++-+|+||+|+|. .||.. |-+|+.|-.||||+
T Consensus 82 sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~ 159 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSN 159 (1255)
T ss_pred HHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhcccc
Confidence 99999999863 58999999999999999999999 89999999999999999999998 56655 67899999999999
Q ss_pred cccccccCccccCccceeeEEEecccccccCCCccccCCcccEEEecccccc-CCccccccCCccccEEeccCCCCcCCC
Q 001494 251 NKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFS-GLIPHSLGNLSNIAFLFLDSNSLFGLI 329 (1067)
Q Consensus 251 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~ 329 (1067)
|++. .+|+.+..|.+|++|+|++|.+....-..+-.+++|+.|.+++.+-+ .-+|.++.++.+|..++++.|.+. ..
T Consensus 160 NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~v 237 (1255)
T KOG0444|consen 160 NRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IV 237 (1255)
T ss_pred chhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cc
Confidence 9998 78889999999999999999987554455667888999999987643 347889999999999999999998 56
Q ss_pred CcccccCCCCCeEEecCccccccCCccccCCCCCCeEEccCCcCccccCcccCCCCCCCEEEccCCcccc-cCCCccccc
Q 001494 330 PSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLSGSIPCEIGNLKSLSYLNLAFNKLTS-SIPISLSNL 408 (1067)
Q Consensus 330 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l 408 (1067)
|+.+..+.+|+.|+||+|+|+ .+.-..+...+|++|+++.|+++ ..|..+..+++|+.|++.+|+++- -+|..++.+
T Consensus 238 Pecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL 315 (1255)
T KOG0444|consen 238 PECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKL 315 (1255)
T ss_pred hHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhh
Confidence 889999999999999999998 45556677788999999999999 789999999999999999999873 368889999
Q ss_pred cCCcEEEcccCcCcccCchhhhCcCCCcEEeCCCCcccCCCCCCCCCCcccEEeccCccccccc
Q 001494 409 TNLSVLSFYKNSLSGAIPKEYRNLVKLTKLFLGDNQFQGPIPNLKNLTSLVRVHLDRNYLTSNI 472 (1067)
Q Consensus 409 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~ 472 (1067)
.+|+++..++|.+. ..|..++.+.+|+.|.|+.|++-+.+..+.-++.|+.|++..|.--..+
T Consensus 316 ~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLVMP 378 (1255)
T KOG0444|consen 316 IQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLVMP 378 (1255)
T ss_pred hhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCcCccCC
Confidence 99999999999987 7899999999999999999999888887777888888888887644433
No 307
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.4e-33 Score=311.82 Aligned_cols=261 Identities=22% Similarity=0.329 Sum_probs=197.1
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||.|++|.||+|+.. +++.||||++....... ...+.+..|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccccc-ccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 4788899999999999999754 78999999986543222 223578899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+. +++..++.... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||+++......
T Consensus 80 ~~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 80 FLH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred ccc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 996 57888775432 34589999999999999999999999 99999999999999999999999999998665443
Q ss_pred CccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhh-------------hhhhc
Q 001494 956 SNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNI-------------ALDEI 1021 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~-------------~~~~~ 1021 (1067)
.......+++.|+|||.+.+.. ++.++|||||||++|||+||+.||............... ...+.
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 3334456788999999877654 588999999999999999999998643321100000000 00000
Q ss_pred c--CCCCCCC--CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1022 L--DPRLPIP--SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1022 ~--~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. .+..... .........++.+++.+||+.||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0 0000000 0000011234789999999999999999999975
No 308
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=4e-33 Score=303.10 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=200.6
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|+||.||+|.. .+++.+|+|++....... ...+.+..|++++++++|||++++++++..++..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 478889999999999999865 578899999987543222 335778999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC-CeEEeccccceecCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN-EARVSDFGIAKFLKPD 954 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~-~~kl~DfG~a~~~~~~ 954 (1067)
|+++++|.+++.... ...+++..+.+++.++++|++|||++ +++||||||+||+++.++ .+|++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 80 YAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred cCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 999999999996432 34578999999999999999999999 999999999999998655 5799999999876543
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCC-CCCCCcch
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPR-LPIPSHNV 1033 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1033 (1067)
. ......++..|+|||.+.+..++.++||||||+++|+|++|+.||+..... .....+.... ...+..
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-- 224 (256)
T cd08220 156 S-KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--------ALVLKIMSGTFAPISDR-- 224 (256)
T ss_pred c-cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--------HHHHHHHhcCCCCCCCC--
Confidence 2 223356788999999998888899999999999999999999998643321 1111111111 111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+.+++.+||+.+|++|||+.|+++
T Consensus 225 --~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 225 --YSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred --cCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 2234889999999999999999999986
No 309
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.5e-33 Score=313.00 Aligned_cols=261 Identities=22% Similarity=0.293 Sum_probs=197.9
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--CceeE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHSFI 872 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 872 (1067)
++|+..+.||+|+||.||+|... +++.||+|.+...... ......+.+|+.++++++||||+++++++... ...|+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 46888999999999999999765 6889999998754322 22334567899999999999999999998877 89999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
||||+++ +|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 84 v~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 84 VMEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 9999974 8888875422 3589999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------h------hh
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------I------AL 1018 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~------~~ 1018 (1067)
..........+++.|+|||.+.+.. ++.++|+||+|+++|||++|+.||.............. . ..
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 5433344456788999999887644 68899999999999999999999864332111000000 0 00
Q ss_pred hhcc-----CCCCCCCCcchHH--HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1019 DEIL-----DPRLPIPSHNVQE--KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1019 ~~~~-----~~~~~~~~~~~~~--~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.... ...........+. ....+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000 0000000000001 1345789999999999999999999985
No 310
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.8e-33 Score=307.99 Aligned_cols=248 Identities=25% Similarity=0.391 Sum_probs=199.2
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.|...+.||+|++|.||++.. .+++.||+|++... .....+.+.+|+.+++.++||||+++++++...+..++|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 355567899999999999965 57889999988542 22234568899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.. ..+++..+..++.|++.|++|||++ +++||||+|+||+++.++.++++|||.+.......
T Consensus 97 ~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 97 FLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred ccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 9999999999854 3478899999999999999999999 99999999999999999999999999887655433
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
.......|++.|+|||...+..++.++|||||||++|||++|+.||........ .........+....+. .
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~----~ 240 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA-----MKRIRDNLPPKLKNLH----K 240 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH-----HHHHHhcCCCCCcccc----c
Confidence 333445688999999999888899999999999999999999999864322111 0111111111111111 1
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+.+++.+||+.+|++|||+.++++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 2235899999999999999999999985
No 311
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.9e-33 Score=310.18 Aligned_cols=250 Identities=25% Similarity=0.423 Sum_probs=202.2
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|+..+.||+|+||.||++.. .+++.||+|.+.... ....+.+..|+.++++++||||+++++++...+..|+|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 5788899999999999999864 578899999985432 222467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++++|.+++... .+++.++..++.|++.|++|||++ +++||||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 96 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred ecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 999999999998532 378889999999999999999999 9999999999999999999999999998876654
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........+++.|+|||.+.+..++.++|||||||++||+++|+.||.......... .....+....+ ...
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~-------~~~~~~~~~~~--~~~ 239 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------LIATNGTPELQ--NPE 239 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-------ehhcCCCCCCC--Ccc
Confidence 444445678899999999988889999999999999999999999986433211100 00001111111 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.....+.+++.+||+.+|++||++.++++.
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 223458899999999999999999999863
No 312
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4e-33 Score=305.37 Aligned_cols=254 Identities=23% Similarity=0.400 Sum_probs=200.5
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCC---hhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGE---MTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 872 (1067)
+|+..+.||+|++|.||+|.. .+++.||+|++....... ....+.+..|++++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999864 678999999987543221 1235678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC-CeEEeccccceec
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN-EARVSDFGIAKFL 951 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~-~~kl~DfG~a~~~ 951 (1067)
||||+++++|.+++... .++++..+..++.|++.|++|||++ +++||||||+||+++.++ .+||+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY---GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 99999999999998643 3578999999999999999999999 999999999999998876 5999999999876
Q ss_pred CCCCCc----cccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 952 KPDSSN----WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 952 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
...... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||........ .....+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~- 228 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-----LALIFKIASATT- 228 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-----HHHHHHHhccCC-
Confidence 543211 1234678899999999888899999999999999999999999863322110 011111110000
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..........++.+++.+|++.+|++||++.|+++
T Consensus 229 -~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 -APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 01111223345889999999999999999999975
No 313
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.4e-33 Score=312.67 Aligned_cols=260 Identities=27% Similarity=0.401 Sum_probs=200.3
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc-ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 6888999999999999999765 6889999998654322 2335678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|++++.+..+... ...+++.++..++.|++.|++|||+. +++|||++|+||+++.++.+||+|||.+.......
T Consensus 81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEAS---PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 9998877766533 23488999999999999999999999 99999999999999999999999999998765443
Q ss_pred C-ccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh------hhhhhc--cCC-
Q 001494 956 S-NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN------IALDEI--LDP- 1024 (1067)
Q Consensus 956 ~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~------~~~~~~--~~~- 1024 (1067)
. ......++..|+|||++.+. .++.++||||||+++|||++|+.||.............. ...... .++
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 2 33446678899999999888 789999999999999999999999864322110000000 000000 000
Q ss_pred ----CCCCCCc-------chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1025 ----RLPIPSH-------NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1025 ----~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....... .......++.+++.+||+.+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000000 00012456899999999999999999999875
No 314
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.4e-33 Score=303.86 Aligned_cols=243 Identities=27% Similarity=0.357 Sum_probs=197.9
Q ss_pred cccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCH
Q 001494 804 IGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSL 882 (1067)
Q Consensus 804 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 882 (1067)
||.|+||.||+|+.. +++.||+|++...........+.+..|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999765 5899999998754433334567799999999999999999999999999999999999999999
Q ss_pred HHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcccccc
Q 001494 883 AMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTELA 962 (1067)
Q Consensus 883 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 962 (1067)
.+++... ..+++..+..++.|++.|++|+|++ +++|+||+|+||+++.++.++++|||.++...... ......
T Consensus 81 ~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~ 153 (262)
T cd05572 81 WTILRDR---GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC 153 (262)
T ss_pred HHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-cccccc
Confidence 9999643 3478899999999999999999998 99999999999999999999999999998765432 223356
Q ss_pred ccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhcc--CCCCCCCCcchHHHHHHH
Q 001494 963 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEIL--DPRLPIPSHNVQEKLISF 1040 (1067)
Q Consensus 963 gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l 1040 (1067)
+++.|+|||.+.+..++.++|+||+|+++|||++|+.||..... ........+. ......+... ..++
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----~~~~ 223 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE------DPMEIYNDILKGNGKLEFPNYI----DKAA 223 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC------CHHHHHHHHhccCCCCCCCccc----CHHH
Confidence 78899999998888899999999999999999999999864331 0111122222 1222222222 3458
Q ss_pred HHHHHhccCCCCCCCCC-----HHHHHH
Q 001494 1041 VEVAISCLDESPESRPT-----MQKVSQ 1063 (1067)
Q Consensus 1041 ~~li~~cl~~dP~~Rpt-----~~evl~ 1063 (1067)
.+++.+||+.+|++||+ +.|+++
T Consensus 224 ~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 224 KDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 99999999999999999 777765
No 315
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.9e-33 Score=306.89 Aligned_cols=247 Identities=26% Similarity=0.309 Sum_probs=194.0
Q ss_pred cccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCH
Q 001494 804 IGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSL 882 (1067)
Q Consensus 804 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 882 (1067)
||+|+||+||+|.. .+|+.||+|.+...........+.+..|++++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999864 47899999998653322222345667899999999999999999999999999999999999999
Q ss_pred HHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcccccc
Q 001494 883 AMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTELA 962 (1067)
Q Consensus 883 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 962 (1067)
.+++..... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+|++|||.+...... .......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRA 155 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC-Ccccccc
Confidence 998864332 3589999999999999999999999 9999999999999999999999999999765432 2223456
Q ss_pred ccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHH
Q 001494 963 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVE 1042 (1067)
Q Consensus 963 gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1042 (1067)
++..|+|||++.+..++.++||||+||++|+|++|+.||........ ...............+.. ....+.+
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~ 227 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE----KEELKRRTLEMAVEYPDK----FSPEAKD 227 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc----HHHHHhccccccccCCcc----CCHHHHH
Confidence 78899999999888899999999999999999999999864332110 111111111111122222 2335889
Q ss_pred HHHhccCCCCCCCC-----CHHHHHH
Q 001494 1043 VAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1043 li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
++.+||+.+|.+|| ++.++++
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHh
Confidence 99999999999999 6666764
No 316
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.8e-33 Score=309.41 Aligned_cols=261 Identities=20% Similarity=0.324 Sum_probs=199.2
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..++||+|++|.||+|+.. +|+.||+|++...... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 4788899999999999999765 6899999998754322 223567789999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++ ++.+++........+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 9985 7888776544445689999999999999999999999 99999999999999999999999999997655433
Q ss_pred CccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh-------hhhhhhcc-----
Q 001494 956 SNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL-------NIALDEIL----- 1022 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~----- 1022 (1067)
.......+++.|+|||.+.+. .++.++||||+||++|||++|+.||............. ......+.
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 333445678899999987654 46889999999999999999999986543211100000 00000000
Q ss_pred CCCCCCCCc-----chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1023 DPRLPIPSH-----NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1023 ~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+.... ........+.+++.+|++.||.+||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000 00112345789999999999999999999975
No 317
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5.2e-33 Score=307.48 Aligned_cols=252 Identities=28% Similarity=0.470 Sum_probs=204.0
Q ss_pred HhcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeE
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 872 (1067)
..+.|+..+.||+|+||.||+|... +++.||+|++..... ..+.+..|++.+++++|+|++++++++...+..|+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 3456888899999999999999765 788999999875322 35678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
|+||+++++|.+++.... ..+++..+..++.+++.|++|||+. |++|+||+|+||+++.++.++|+|||.+....
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 999999999999996533 3689999999999999999999998 99999999999999999999999999987655
Q ss_pred CCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
..........+++.|+|||.+.+..++.++|||||||++|||++|+.||........ ...+...... +...
T Consensus 168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~-~~~~ 238 (286)
T cd06614 168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA--------LFLITTKGIP-PLKN 238 (286)
T ss_pred cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHHhcCCC-CCcc
Confidence 443333445678899999999888899999999999999999999999864332211 0111111110 0001
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.......+.+++.+||+.+|.+|||+.++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1112345889999999999999999999986
No 318
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.5e-33 Score=310.45 Aligned_cols=248 Identities=27% Similarity=0.425 Sum_probs=196.1
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
..|+..+.||+|+||.||+|... +++.||+|++...........+++.+|+++++.++||||+++++++.+.+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999754 68999999986543333344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++ ++.+++... ...+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~g-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCLG-SASDILEVH--KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhCC-CHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 99974 666655322 23589999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCccccccccccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccC-CCCCCCC
Q 001494 955 SSNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD-PRLPIPS 1030 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1030 (1067)
....+++.|+|||++. ...++.++||||||+++|||++|+.||........ ...+.. .....+
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~--------~~~~~~~~~~~~~- 235 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--------LYHIAQNDSPTLS- 235 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH--------HHHHhcCCCCCCC-
Confidence 2346788999999874 35588899999999999999999999764332110 001110 111111
Q ss_pred cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1031 HNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1031 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
......++.+++.+||+.+|++||++.++++.
T Consensus 236 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 236 --SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred --chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 11233468999999999999999999999863
No 319
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6e-33 Score=304.85 Aligned_cols=253 Identities=24% Similarity=0.389 Sum_probs=195.7
Q ss_pred CCccCccccCCceeEEEEEEC----CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-----
Q 001494 798 FDDEHCIGKGGQGSVYKVELA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ----- 868 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 868 (1067)
|.+.+.||+|+||.||+|... +++.||||++....... ...+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS-SDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 566788999999999999643 46889999987543332 33567889999999999999999999886532
Q ss_pred -ceeEEEEeccCCCHHHHhcccC---ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEec
Q 001494 869 -HSFIVYEYLEMGSLAMILSNDA---AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSD 944 (1067)
Q Consensus 869 -~~~lv~E~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~D 944 (1067)
..++++||+++|++.+++.... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 2478999999999988874321 223578899999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhhc
Q 001494 945 FGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDEI 1021 (1067)
Q Consensus 945 fG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1021 (1067)
||.++....... ......+++.|++||.+.+..++.++|||||||++|||++ |+.||....... ....+
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~--------~~~~~ 228 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE--------IYNYL 228 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH--------HHHHH
Confidence 999986543221 1123345678999999988889999999999999999999 888876432210 11111
Q ss_pred cC-CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1022 LD-PRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1022 ~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.. .....+.. ....+.+++.+||+.+|++||++.|+++.|+
T Consensus 229 ~~~~~~~~~~~----~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~ 270 (273)
T cd05074 229 IKGNRLKQPPD----CLEDVYELMCQCWSPEPKCRPSFQHLRDQLE 270 (273)
T ss_pred HcCCcCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 11111111 2235899999999999999999999999885
No 320
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.5e-33 Score=309.65 Aligned_cols=260 Identities=23% Similarity=0.324 Sum_probs=196.7
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|+..+.||.|++|.||+|.. .+|+.||+|++....... ...+.+.+|+++++.++|||++++++++.+++..|+||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE-GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc-cchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 56778999999999999965 479999999987543222 2235678899999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
++ +++.+++.... ...+++..+..++.|+++||+|||++ +++||||+|+||+++.++.++|+|||.++.......
T Consensus 80 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 80 LD-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred cC-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 95 68888885433 24589999999999999999999999 999999999999999999999999999976654333
Q ss_pred ccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------h------hhhhcc
Q 001494 957 NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------I------ALDEIL 1022 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~------~~~~~~ 1022 (1067)
......+++.|+|||++.+. .++.++||||||+++|||++|+.||.............. . ...+..
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 33344568899999987664 468899999999999999999999864332110000000 0 000000
Q ss_pred --CCCCCC--CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1023 --DPRLPI--PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1023 --~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.+.... ..........++.+++.+|++.+|++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000 00001112245889999999999999999999985
No 321
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=291.63 Aligned_cols=253 Identities=27% Similarity=0.370 Sum_probs=198.0
Q ss_pred CCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHH-HhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 798 FDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKA-LTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.+....||.|+||+|+|.. .++|+..|||+++.... ...+++++.|.+. ++.-+.||||+++|++-.++..|+.||
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME 143 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence 3445679999999999974 56899999999986543 3346788888886 555589999999999999999999999
Q ss_pred eccCCCHHHHhcc--cCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 876 YLEMGSLAMILSN--DAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 876 ~~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
.|+- +++.+.+. ......+++.-.-.|.....+||.||.+.. .|||||+||+|||++..|.+|+||||++.++..
T Consensus 144 LMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 144 LMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred HHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 9964 66544432 223445788888888888999999999874 899999999999999999999999999987653
Q ss_pred CCCccccccccccccCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC--CC
Q 001494 954 DSSNWTELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP--IP 1029 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 1029 (1067)
. ...+.-+|-..|||||.+... .|+.+|||||+|+++||+.||+.||+.+... .+.+.+++.+..+ ..
T Consensus 221 S-iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv-------feql~~Vv~gdpp~l~~ 292 (361)
T KOG1006|consen 221 S-IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV-------FEQLCQVVIGDPPILLF 292 (361)
T ss_pred H-HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH-------HHHHHHHHcCCCCeecC
Confidence 3 233455788889999988643 4889999999999999999999998765432 2223333333322 22
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.....+...++..++..|+.+|-..||.+.++.+
T Consensus 293 ~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 293 DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 3333345667999999999999999999999875
No 322
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=5.7e-33 Score=305.45 Aligned_cols=245 Identities=22% Similarity=0.239 Sum_probs=186.7
Q ss_pred ccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHH---HhcCCCCeeeeeeEEEeeCCceeEEEEecc
Q 001494 803 CIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKA---LTEIRHRNIVKFYGFCSHAQHSFIVYEYLE 878 (1067)
Q Consensus 803 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~---l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 878 (1067)
.||+|+||.||++.. .+++.||+|.+.............+.+|..+ +...+||+++.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999975 4689999999865432222222334444433 334479999999999999999999999999
Q ss_pred CCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcc
Q 001494 879 MGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNW 958 (1067)
Q Consensus 879 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 958 (1067)
+++|.+++... +.+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||++....... .
T Consensus 81 ~~~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~ 152 (279)
T cd05633 81 GGDLHYHLSQH---GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--P 152 (279)
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--c
Confidence 99999888543 3589999999999999999999999 99999999999999999999999999997654322 2
Q ss_pred ccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHH
Q 001494 959 TELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKL 1037 (1067)
Q Consensus 959 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1067)
....|++.|+|||.+.+ ..++.++||||+||++|||++|+.||........ ..............+.. ..
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~ 223 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----HEIDRMTLTVNVELPDS----FS 223 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-----HHHHHHhhcCCcCCccc----cC
Confidence 33468999999998764 5588999999999999999999999864322110 00000111111111222 23
Q ss_pred HHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 001494 1038 ISFVEVAISCLDESPESRP-----TMQKVSQL 1064 (1067)
Q Consensus 1038 ~~l~~li~~cl~~dP~~Rp-----t~~evl~~ 1064 (1067)
.++.+++.+||+.||++|| +++|+++.
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 3588999999999999999 59998763
No 323
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.6e-33 Score=308.89 Aligned_cols=260 Identities=23% Similarity=0.358 Sum_probs=199.6
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|++.+.||+|+||.||+|+. .+|+.||+|++...... ....+.+.+|+.++++++|||++++++++..+...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 478889999999999999975 47899999998754322 2335678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+ +++|.+++.... ..+++.++..++.|+++|++|||++ +++|+||||+||+++.++.++++|||.+.......
T Consensus 80 ~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 80 YM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred cc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 99 999999885432 4589999999999999999999999 99999999999999999999999999998765433
Q ss_pred C-ccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------hh---------
Q 001494 956 S-NWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------IA--------- 1017 (1067)
Q Consensus 956 ~-~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~~--------- 1017 (1067)
. ......++..|+|||.+.+.. ++.++||||+|+++|||++|+.||.............. ..
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence 2 233456889999999886544 68999999999999999999888754322110000000 00
Q ss_pred hhhccCCCCC-CC-CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1018 LDEILDPRLP-IP-SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1018 ~~~~~~~~~~-~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+..+... .+ .....+...++.+++.+|++.+|.+|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000000 00 0000122356899999999999999999999986
No 324
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.7e-33 Score=307.46 Aligned_cols=252 Identities=25% Similarity=0.412 Sum_probs=193.3
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHH-HhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKA-LTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
++|++.+.||+|+||.||+|... +|+.||+|++....... ...++..|+.. ++..+||||+++++++..++..|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ--EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH--HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 36888999999999999998654 79999999987543222 23455566665 6667899999999999999999999
Q ss_pred EEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 874 YEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
|||++ |++.+++... .....+++..+..++.|++.|++|||+++ +++||||||+||+++.++.+||+|||+++...
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 99997 5787776432 23356899999999999999999999853 89999999999999999999999999998654
Q ss_pred CCCCccccccccccccCcccccc----CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccC-CCCC
Q 001494 953 PDSSNWTELAGTYGYVAPELAYT----MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD-PRLP 1027 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1027 (1067)
... ......++..|+|||.+.+ ..++.++|+||+||++|||++|+.||+..... ......... ....
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~ 227 (283)
T cd06617 156 DSV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-------FQQLKQVVEEPSPQ 227 (283)
T ss_pred ccc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-------HHHHHHHHhcCCCC
Confidence 321 2233467889999998765 44688999999999999999999998632211 011111111 1111
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.+.. ....++.+++.+||+.+|++||++.++++
T Consensus 228 ~~~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 228 LPAE---KFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCcc---ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111 12345889999999999999999999986
No 325
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.3e-33 Score=303.96 Aligned_cols=251 Identities=25% Similarity=0.326 Sum_probs=200.5
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|+||.||+|... +|..||+|.+....... ...+.+.+|+++++.++||||+++++++.+....++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 4778899999999999998654 68899999986532221 234567899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCC-eEEeccccceecCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNE-ARVSDFGIAKFLKPD 954 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~-~kl~DfG~a~~~~~~ 954 (1067)
|+++++|.+++.... ...+++..+..++.|+++|++|||+. +++|+||||+||+++.++. +|++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 80 YCDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred cCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 999999999986432 23578999999999999999999999 9999999999999998865 699999999876544
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
........|++.|+|||+..+..++.++||||||+++|||++|+.||...... ....+.......... .
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~---~ 224 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH--------QLVLKICQGYFAPIS---P 224 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHhcccCCCCC---C
Confidence 33333456889999999998888999999999999999999999998643221 111111111111100 1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....++.+++.+||+.+|++|||+.|+++
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 225 NFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 12235889999999999999999999986
No 326
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=6.3e-33 Score=307.47 Aligned_cols=259 Identities=20% Similarity=0.226 Sum_probs=185.6
Q ss_pred cCCCccCccccCCceeEEEEEECC----CcEEEEEEeCCCCCCChhH--------HHHHHHHHHHHhcCCCCeeeeeeEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELAS----GEIIAVKKFHSPLPGEMTF--------QQEFLNEVKALTEIRHRNIVKFYGF 863 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~l~~~ 863 (1067)
++|++.++||+|+||.||+|...+ +..+|+|+........... ......+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 579999999999999999997654 3456666543221111000 0112233445667789999999997
Q ss_pred EeeCC----ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCC
Q 001494 864 CSHAQ----HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNE 939 (1067)
Q Consensus 864 ~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~ 939 (1067)
+.... ..++++|++.. ++.+.+... ...++..+..++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRI---KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhh---ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCc
Confidence 76544 34678887643 555555332 2246788899999999999999999 9999999999999999999
Q ss_pred eEEeccccceecCCCCC-------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc-c
Q 001494 940 ARVSDFGIAKFLKPDSS-------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSS-S 1011 (1067)
Q Consensus 940 ~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~-~ 1011 (1067)
++|+|||+|+.+..... ......||+.|+|||+..+..++.++|||||||++|||++|+.||......... .
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999987643221 112346899999999999999999999999999999999999999755321110 0
Q ss_pred hhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1012 LNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1012 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
........++..+....+. ....+.+++..|++.+|++||++.++.+.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AAKCDFIKRLHEGKIKIKN-----ANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhHHHHHHHhhhhhhccCC-----CCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 0111112233222222221 1235889999999999999999999999874
No 327
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.3e-33 Score=303.60 Aligned_cols=246 Identities=22% Similarity=0.272 Sum_probs=188.7
Q ss_pred CccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHH-HhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 802 HCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKA-LTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+.||+|+||.||+|.. .+|+.||+|++.............+..|..+ ....+|||++++++++.+++..|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5699999999999965 4689999999864322222222334455544 4455899999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||+++.... ..
T Consensus 82 ~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~ 151 (260)
T cd05611 82 GDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NK 151 (260)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----cc
Confidence 9999998543 3578999999999999999999999 999999999999999999999999999876432 23
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...+++.|+|||.+.+..++.++||||+|+++|||++|..||...... .....+.......+..........
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 223 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--------AVFDNILSRRINWPEEVKEFCSPE 223 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcccCCCCcccccCCHH
Confidence 346788999999998888899999999999999999999998643321 111111111111111111122345
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1040 FVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
+.+++.+||+.+|++||++.++.+.+
T Consensus 224 ~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 224 AVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHHHccCCHHHccCCCcHHHHH
Confidence 89999999999999999876555543
No 328
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.6e-32 Score=297.60 Aligned_cols=249 Identities=31% Similarity=0.483 Sum_probs=202.8
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|++|.||++... +++.|++|++..... ...+.+.+|++.++.++||+++++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4778899999999999999765 788999999875432 345788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred cCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 999999999986432 4689999999999999999999998 99999999999999999999999999998766543
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||+......... .......+....+. .
T Consensus 153 ~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~----~ 222 (253)
T cd05122 153 A-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF-----KIATNGPPGLRNPE----K 222 (253)
T ss_pred c-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH-----HHHhcCCCCcCccc----c
Confidence 2 345578899999999988889999999999999999999999987443211100 01111111111111 1
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1235889999999999999999999875
No 329
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=3.7e-33 Score=310.27 Aligned_cols=263 Identities=19% Similarity=0.274 Sum_probs=196.0
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCc----
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQH---- 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~---- 869 (1067)
++|+..+.||+|+||.||+|... +++.||+|++....... .....+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-GIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-CCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 36888999999999999999754 78999999986543222 22456788999999995 6999999999987665
Q ss_pred -eeEEEEeccCCCHHHHhcccCc--cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC-CCCeEEecc
Q 001494 870 -SFIVYEYLEMGSLAMILSNDAA--AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF-KNEARVSDF 945 (1067)
Q Consensus 870 -~~lv~E~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~-~~~~kl~Df 945 (1067)
.|+||||+++ ++.+++..... ...+++..+..++.||++||+|||++ +|+||||||+||+++. ++.+||+||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 8999999986 78777753322 34689999999999999999999999 9999999999999998 889999999
Q ss_pred ccceecCCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------hh
Q 001494 946 GIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------IA 1017 (1067)
Q Consensus 946 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~~ 1017 (1067)
|+++.+...........+++.|+|||.+.+ ..++.++||||||+++|||++|..||.............. ..
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 156 GLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred ccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 999876544333344467889999998765 4578999999999999999999999864332211000000 00
Q ss_pred hhhc-------cCCCCCC--CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1018 LDEI-------LDPRLPI--PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1018 ~~~~-------~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.... ..+.... ..........++.+++.+||+.+|++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000 0000000 00000122345889999999999999999999875
No 330
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.5e-33 Score=313.86 Aligned_cols=263 Identities=22% Similarity=0.316 Sum_probs=194.7
Q ss_pred CCCccCccccCCceeEEEEEEC---CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--Ccee
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA---SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHSF 871 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 871 (1067)
.|+..++||+|+||.||+|... +++.||+|.+...........+.+.+|+.+++.++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3778889999999999999764 4789999999764322222345678899999999999999999999888 7899
Q ss_pred EEEEeccCCCHHHHhccc-C-ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC----CCCeEEecc
Q 001494 872 IVYEYLEMGSLAMILSND-A-AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF----KNEARVSDF 945 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~-~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~----~~~~kl~Df 945 (1067)
+||||+++ ++.+.+... . ....+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999986 555555322 2 123688999999999999999999999 9999999999999999 899999999
Q ss_pred ccceecCCCCC---ccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccc-hhhhhhhh-
Q 001494 946 GIAKFLKPDSS---NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSS-LNLNIALD- 1019 (1067)
Q Consensus 946 G~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~-~~~~~~~~- 1019 (1067)
|+++....... ......+++.|+|||++.+. .++.++|||||||++|||++|+.||.......... ........
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986643322 22345678899999987664 57899999999999999999999986433211000 00000000
Q ss_pred --hc-----------------------cCCCCCCCCcchH-------HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1020 --EI-----------------------LDPRLPIPSHNVQ-------EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1020 --~~-----------------------~~~~~~~~~~~~~-------~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+. .......+..... ....++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 0000011100000 12235889999999999999999999985
No 331
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=4.3e-33 Score=304.52 Aligned_cols=246 Identities=26% Similarity=0.371 Sum_probs=196.8
Q ss_pred cccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCH
Q 001494 804 IGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSL 882 (1067)
Q Consensus 804 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 882 (1067)
||+|+||.||+++.. +|+.||+|++...........+.+.+|++++++++|||++++++.+..+...|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999776 5999999998754333334567788999999999999999999999999999999999999999
Q ss_pred HHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC------
Q 001494 883 AMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS------ 956 (1067)
Q Consensus 883 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~------ 956 (1067)
.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99986433 589999999999999999999999 999999999999999999999999999875443311
Q ss_pred --ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 957 --NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 957 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
......++..|+|||...+..++.++||||||+++||+++|+.||...... .....+.......+...
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~-- 224 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--------EIFQNILNGKIEWPEDV-- 224 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCcCCCccc--
Confidence 223456788999999998888999999999999999999999998643321 11112222222222111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
.....+.+++.+||+.+|++|||+.++.+.+
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 225 EVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred cCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 1134588999999999999999995555544
No 332
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.2e-33 Score=308.63 Aligned_cols=254 Identities=27% Similarity=0.378 Sum_probs=193.7
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCceeEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 874 (1067)
+|...+.||+|+||.||++.. .+++.||+|++...... .....+..|+.++.++. ||||+++++++..++..+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 456678899999999999865 46899999998754322 34567889999999996 999999999999999999999
Q ss_pred EeccCCCHHHHhcc--cCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 875 EYLEMGSLAMILSN--DAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 875 E~~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
||++. ++.++... ......+++..+..++.+++.|++|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 99874 44433211 112346899999999999999999999742 89999999999999999999999999997654
Q ss_pred CCCCccccccccccccCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCC-CC
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRL-PI 1028 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1028 (1067)
.... .....|++.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+...... ..
T Consensus 160 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~ 231 (288)
T cd06616 160 DSIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-------VFDQLTQVVKGDPPIL 231 (288)
T ss_pred cCCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-------HHHHHhhhcCCCCCcC
Confidence 3322 2334678899999998776 588999999999999999999999864321 1111122211111 11
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+.........++.+++.+||+.+|++|||+.+|++
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 232 SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111223446899999999999999999999976
No 333
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.7e-34 Score=314.80 Aligned_cols=246 Identities=24% Similarity=0.368 Sum_probs=191.8
Q ss_pred CccCccccCCceeEEEEE-ECCCcEEE---EEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc--eeE
Q 001494 799 DDEHCIGKGGQGSVYKVE-LASGEIIA---VKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH--SFI 872 (1067)
Q Consensus 799 ~~~~~lG~G~~g~Vy~~~-~~~~~~va---vK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~l 872 (1067)
+...+||+|+|-+||+|- ..+|..|| ||.-... ......+.|..|+.+++.|+|||||++++++.+... .-+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~--q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~ 120 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVT--QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINF 120 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhh--cChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeee
Confidence 445789999999999994 44677776 3322111 223345789999999999999999999999987664 779
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC-CCeEEeccccceec
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK-NEARVSDFGIAKFL 951 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~-~~~kl~DfG~a~~~ 951 (1067)
|+|.+..|+|..|.++.+. +....+..|++||++||.|||++ .|+|+|||||.+||+|+.+ |.|||+|.|+|+..
T Consensus 121 iTEL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL 196 (632)
T ss_pred eeecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence 9999999999999966543 77789999999999999999998 5699999999999999755 89999999999876
Q ss_pred CCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCc
Q 001494 952 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSH 1031 (1067)
Q Consensus 952 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1067)
... ......|||.|||||++. ..|++.+||||||++++||.|+..||..-. ...+....+..+.-+..
T Consensus 197 r~s--~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~-------n~AQIYKKV~SGiKP~s-- 264 (632)
T KOG0584|consen 197 RKS--HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT-------NPAQIYKKVTSGIKPAA-- 264 (632)
T ss_pred hcc--ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC-------CHHHHHHHHHcCCCHHH--
Confidence 643 334478999999999887 779999999999999999999999986322 22222233332221100
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...-.-.++++||.+|+.. ..+|||+.|+++
T Consensus 265 l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 265 LSKVKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 0000012488999999999 999999999985
No 334
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=314.86 Aligned_cols=253 Identities=28% Similarity=0.421 Sum_probs=199.0
Q ss_pred CCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC------ce
Q 001494 798 FDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ------HS 870 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~ 870 (1067)
+...+.||+||||.||+++ ..+|+.||||.+..... ....+...+|++++++++|||||+++++-++.. ..
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~--~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS--LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcc--cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 4556889999999999998 66899999999976432 233567789999999999999999998865544 56
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeC--CCCC--eEEeccc
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLD--FKNE--ARVSDFG 946 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~--~~~~--~kl~DfG 946 (1067)
.+|||||.+|+|...+........+++.+.+.+..+++.||.|||++ +||||||||.||++- .+|. .||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 89999999999999998887777899999999999999999999999 999999999999983 4444 7999999
Q ss_pred cceecCCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccc------c---chhhhh
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISS------S---SLNLNI 1016 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~------~---~~~~~~ 1016 (1067)
.|+.+..+ ......+||..|.+||.+.. +.|+..+|.|||||++||..||..||.-...... . ......
T Consensus 170 ~Arel~d~-s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v 248 (732)
T KOG4250|consen 170 AARELDDN-SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGV 248 (732)
T ss_pred ccccCCCC-CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCce
Confidence 99987755 46788999999999999884 7899999999999999999999999853221100 0 000000
Q ss_pred hh--------hhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCC
Q 001494 1017 AL--------DEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRP 1056 (1067)
Q Consensus 1017 ~~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 1056 (1067)
.. .-.....++.|.+........+-..+..++..+|.+|-
T Consensus 249 ~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 249 AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 00 00111233444444455556677788888888888887
No 335
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.7e-33 Score=329.17 Aligned_cols=266 Identities=18% Similarity=0.225 Sum_probs=185.8
Q ss_pred HhcCCCccCccccCCceeEEEEEEC--CCcEEEEEEe--------------CCCCCCChhHHHHHHHHHHHHhcCCCCee
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA--SGEIIAVKKF--------------HSPLPGEMTFQQEFLNEVKALTEIRHRNI 857 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~--------------~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 857 (1067)
...+|++.++||+|+||+||++..+ ++..+++|.+ .............+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3468999999999999999997643 2222222211 11111122234568899999999999999
Q ss_pred eeeeEEEeeCCceeEEEEeccCCCHHHHhcccCc--cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeC
Q 001494 858 VKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAA--AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLD 935 (1067)
Q Consensus 858 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~ 935 (1067)
|++++++.+.+..|+|+|++.+ ++..++..... .......++..++.|++.||+|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 9999999999999999999965 56655533211 22234567788999999999999999 999999999999999
Q ss_pred CCCCeEEeccccceecCCCCC-ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCC-CCccccccccchh
Q 001494 936 FKNEARVSDFGIAKFLKPDSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP-GDFISLISSSSLN 1013 (1067)
Q Consensus 936 ~~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p-~~~~~~~~~~~~~ 1013 (1067)
.++.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.+ +............
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 999999999999987654322 22346799999999999999999999999999999999998754 3221110000000
Q ss_pred hh----------------hhhhhccCCCCCCCCcchHH------HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1014 LN----------------IALDEILDPRLPIPSHNVQE------KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1014 ~~----------------~~~~~~~~~~~~~~~~~~~~------~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.. .....+....+......... ....+.+++.+|++.||++|||+.|+++
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00 00000000000000000000 1124677899999999999999999986
No 336
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.3e-34 Score=285.86 Aligned_cols=203 Identities=24% Similarity=0.386 Sum_probs=168.6
Q ss_pred hcCCCccCccccCCceeEEEEE-ECC----CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee-CC
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVE-LAS----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH-AQ 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~-~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 868 (1067)
...|+....||+|.||.||+|. .++ .+.+|+|+++....... .-....+|+..++.++||||+.+..++-+ +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG-iS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG-ISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC-cCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 4568899999999999999983 332 23699999986544322 23556799999999999999999998877 78
Q ss_pred ceeEEEEeccCCCHHHHhcc--cCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC----CCeEE
Q 001494 869 HSFIVYEYLEMGSLAMILSN--DAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK----NEARV 942 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~----~~~kl 942 (1067)
..|+++||.+. +|.++++. ....+.++...+..|..||+.|+.|||++ -|+|||+||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 99999999987 77777753 23345788999999999999999999999 89999999999999888 88999
Q ss_pred eccccceecCCCCCc---cccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCC
Q 001494 943 SDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGD 1002 (1067)
Q Consensus 943 ~DfG~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~ 1002 (1067)
+|||+++.+..+-.. ....+.|.+|+|||.+.+.+ ||++.|||+.|||+.||+|-.+-|.
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 999999988755332 23467799999999888765 8999999999999999999776654
No 337
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.8e-33 Score=310.67 Aligned_cols=262 Identities=26% Similarity=0.330 Sum_probs=196.6
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--Ccee
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHSF 871 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 871 (1067)
.++|+..+.||+|+||.||+|.. .+|+.||+|++....... .....+.+|+.++++++|+|++++++++.+. +..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 46799999999999999999975 468999999986433222 1223466899999999999999999998755 4689
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+||||+++ ++.+++... ...+++.++..++.|+++|++|||+. +++||||||+||+++.++.+||+|||.+...
T Consensus 85 lv~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 99999975 787777532 24689999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------hhhhhcc-
Q 001494 952 KPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------IALDEIL- 1022 (1067)
Q Consensus 952 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~- 1022 (1067)
...........+++.|+|||.+.+ ..++.++||||+||++|||++|+.||.............. .......
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence 654333344456788999998865 4578999999999999999999999864432211000000 0000000
Q ss_pred ---CCCCCC---CCcc----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1023 ---DPRLPI---PSHN----VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1023 ---~~~~~~---~~~~----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...... +... ......++.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000 0000 0112345789999999999999999999985
No 338
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.4e-32 Score=304.34 Aligned_cols=244 Identities=26% Similarity=0.407 Sum_probs=196.6
Q ss_pred cCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 801 EHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 801 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
..+||+|+||.||++.. .+++.||+|++... .....+.+.+|+.+++.++|||++++++++...+..++||||+++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 46799999999999966 57899999997542 222356788999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
+++.+++.. ..+++..+..++.|++.|++|||+. |++||||+|+||+++.++.++|+|||.+...........
T Consensus 102 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 102 GALTDIVTH----TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred CcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 999988743 2478899999999999999999999 999999999999999999999999999876654433334
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHH
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLIS 1039 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1067)
...|++.|+|||.+.+..++.++||||+||++|||++|+.||........ .........+..... ......
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~~~ 245 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-----MKMIRDNLPPKLKNL----HKVSPS 245 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhhCCcccCCc----ccCCHH
Confidence 45688999999998888889999999999999999999999864322111 011111111111111 112234
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1040 FVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1040 l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+.+++.+||+.+|.+||++.++++
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHHHhc
Confidence 789999999999999999999986
No 339
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6e-33 Score=332.58 Aligned_cols=254 Identities=28% Similarity=0.473 Sum_probs=204.6
Q ss_pred CCCccCccccCCceeEEEEEEC--------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeC
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA--------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHA 867 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 867 (1067)
+....+.+|+|+||.||+|... ....||||..+..... ...+.+..|+++|+.+ +||||+.++|+|.++
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 3455669999999999998532 1457999999866543 4568899999999999 599999999999999
Q ss_pred CceeEEEEeccCCCHHHHhcccC-----------cc--CCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceee
Q 001494 868 QHSFIVYEYLEMGSLAMILSNDA-----------AA--EDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLL 934 (1067)
Q Consensus 868 ~~~~lv~E~~~~g~L~~~l~~~~-----------~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill 934 (1067)
+..++|+||+..|+|..++++.+ .. ..++..+.+.++.|||.|++||++. ++||||+.++|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEe
Confidence 99999999999999999997654 01 2388899999999999999999999 99999999999999
Q ss_pred CCCCCeEEeccccceecCCCCCcc-ccccc--cccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccc
Q 001494 935 DFKNEARVSDFGIAKFLKPDSSNW-TELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSS 1010 (1067)
Q Consensus 935 ~~~~~~kl~DfG~a~~~~~~~~~~-~~~~g--t~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~ 1010 (1067)
+++..+||+|||+|+......... ....| +..|||||.+....|+.|+|||||||++||++| |..||.......
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~-- 529 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE-- 529 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH--
Confidence 999999999999999755443322 22232 456999999999999999999999999999998 889987533111
Q ss_pred chhhhhhhhhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1011 SLNLNIALDEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1011 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.....+.++ ++..|..+.. +++++|+.||+.+|++||++.++++.|+
T Consensus 530 -----~l~~~l~~G~r~~~P~~c~~----eiY~iM~~CW~~~p~~RP~F~~~~~~~~ 577 (609)
T KOG0200|consen 530 -----ELLEFLKEGNRMEQPEHCSD----EIYDLMKSCWNADPEDRPTFSECVEFFE 577 (609)
T ss_pred -----HHHHHHhcCCCCCCCCCCCH----HHHHHHHHHhCCCcccCCCHHHHHHHHH
Confidence 111222222 3344444444 4899999999999999999999999875
No 340
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.7e-32 Score=296.20 Aligned_cols=249 Identities=24% Similarity=0.430 Sum_probs=204.1
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||+|++|.||++... +++.||+|.+...... ....+.+.+|++++++++|||++++++++.+.+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 4778899999999999999654 6889999999765432 2345779999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+++++|.+++... ..+++..+..++.|++.|++|||+. ||+||||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 80 YAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred cCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 99999999998543 4589999999999999999999999 99999999999999999999999999998776554
Q ss_pred CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHH
Q 001494 956 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQE 1035 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1067)
.......++..|+|||...+..++.++||||+|+++|+|++|+.||....... .............+...
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~--- 223 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA-------ALFRIVQDDHPPLPEGI--- 223 (254)
T ss_pred ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH-------HHHHHhccCCCCCCCCC---
Confidence 43445678899999999888888999999999999999999999986433211 00011111111222222
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1036 KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1036 ~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+.+++.+||+.+|++|||+.+++.
T Consensus 224 -~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 224 -SPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -CHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 234889999999999999999999875
No 341
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.9e-32 Score=296.77 Aligned_cols=249 Identities=29% Similarity=0.416 Sum_probs=204.2
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--CceeEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHSFIV 873 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 873 (1067)
+|+..+.||+|++|.||+|... +++.|++|++...... ....+.+.+|++.+++++||||+++++++.+. ...++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 4777899999999999999765 7899999998754332 33467889999999999999999999999988 899999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++++|.+++.... .+++.++..++.++++|++|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 99999999999986433 689999999999999999999998 999999999999999999999999999987765
Q ss_pred CCC--ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccC--CCCCCC
Q 001494 954 DSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILD--PRLPIP 1029 (1067)
Q Consensus 954 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 1029 (1067)
... ......++..|+|||...+...+.++||||||+++|+|++|+.||...... ......... .....+
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~ 226 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP-------MAALYKIGSSGEPPEIP 226 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------HHHHHhccccCCCcCCC
Confidence 432 134456888999999998888999999999999999999999998754411 111111111 111112
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.. ....+.+++.+|++.+|++||++.|+++
T Consensus 227 ~~----~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 227 EH----LSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cc----cCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11 2345899999999999999999999986
No 342
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.3e-33 Score=307.63 Aligned_cols=262 Identities=23% Similarity=0.326 Sum_probs=194.9
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+..+.||+|++|+||+|... +|+.||+|++......+ ...+.+.+|++++++++||||+++++++.+....|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-cchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 46888999999999999999764 78999999986543222 23456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC-CCCeEEeccccceecCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF-KNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~-~~~~kl~DfG~a~~~~~ 953 (1067)
||+++ ++.+++.... ....++..+..++.||+.|++|||++ +++||||+|+||+++. ++.+||+|||++.....
T Consensus 81 e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 81 EYLDL-DLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ecccc-cHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 99964 7777664322 23357888889999999999999999 9999999999999985 45699999999986654
Q ss_pred CCCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh---hhhhhc--------
Q 001494 954 DSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN---IALDEI-------- 1021 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~---~~~~~~-------- 1021 (1067)
.........+++.|+|||++.+. .++.++||||+||++|+|+||+.||.............. ......
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccch
Confidence 43333445678899999988664 578899999999999999999999864332111000000 000000
Q ss_pred ----cCCCCCCCC--cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1022 ----LDPRLPIPS--HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1022 ----~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..+...... ........++.+++.+|++.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000000 000112235789999999999999999999985
No 343
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.3e-32 Score=297.42 Aligned_cols=251 Identities=29% Similarity=0.443 Sum_probs=205.2
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..+.||.|+||.||++... +++.||+|++...... ....+++.+|+++++.++|||++++++.+...+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 4778899999999999999654 6899999998754332 2345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccC-ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 876 YLEMGSLAMILSNDA-AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|+++++|.+++.... ....+++.++..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999986532 235689999999999999999999999 9999999999999999999999999999876654
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCC-CCCCcch
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRL-PIPSHNV 1033 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1033 (1067)
........|++.|+|||...+..++.++||||+|+++|+|++|+.||+..... ........... ..+..
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~-- 226 (258)
T cd08215 157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL--------ELALKILKGQYPPIPSQ-- 226 (258)
T ss_pred cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH--------HHHHHHhcCCCCCCCCC--
Confidence 43334457889999999988888999999999999999999999998644321 11111111111 11211
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+.+++.+||+.+|++|||+.|+++
T Consensus 227 --~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 227 --YSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --CCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 2234889999999999999999999986
No 344
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6e-33 Score=306.10 Aligned_cols=250 Identities=25% Similarity=0.363 Sum_probs=203.8
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCceeEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 873 (1067)
++|...+.||+|+||.||+|... +++.||+|++...........+.+..|++++++++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888999999999999999654 79999999987543333334567889999999998 99999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKY---GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 9999999999999643 3589999999999999999999999 999999999999999999999999999986653
Q ss_pred CCC--------------------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchh
Q 001494 954 DSS--------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN 1013 (1067)
Q Consensus 954 ~~~--------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~ 1013 (1067)
... ......++..|+|||...+..++.++||||+|+++|++++|+.||......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------ 228 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY------ 228 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH------
Confidence 321 122345788999999988888999999999999999999999998744321
Q ss_pred hhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCH----HHHHH
Q 001494 1014 LNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTM----QKVSQ 1063 (1067)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~----~evl~ 1063 (1067)
.....+.......+... ...+.+++.+||+.+|++||++ .++++
T Consensus 229 --~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 229 --LTFQKILKLEYSFPPNF----PPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred --HHHHHHHhcCCCCCCcc----CHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11122222233333222 2348899999999999999999 88765
No 345
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-34 Score=295.57 Aligned_cols=244 Identities=24% Similarity=0.323 Sum_probs=203.2
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 872 (1067)
..+|....+||+|+||.|..|+.+ +.+.+|||++++...-.....+--+.|-++++.. +-|.+++++.+|+..+++|.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 357889999999999999999654 6778999999876543322233445677777766 57899999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
||||+.||+|-..++..+. +.+..+.-+|.+||-||-+||++ ||++||+|.+|||+|.+|++||+|||+++.--
T Consensus 428 VMEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc
Confidence 9999999999888865443 66778888999999999999999 99999999999999999999999999998655
Q ss_pred CCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
-+.....+++|||.|+|||.+...+|+..+|.|||||++|||+.|+.||++.+. .+.+..+.+.....|...
T Consensus 502 ~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE--------~elF~aI~ehnvsyPKsl 573 (683)
T KOG0696|consen 502 FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--------DELFQAIMEHNVSYPKSL 573 (683)
T ss_pred cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHHccCcCcccc
Confidence 555666789999999999999999999999999999999999999999986543 445556666666666554
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCC
Q 001494 1033 VQEKLISFVEVAISCLDESPESRP 1056 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rp 1056 (1067)
..| ..++....+.+.|.+|.
T Consensus 574 SkE----Av~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 574 SKE----AVAICKGLLTKHPGKRL 593 (683)
T ss_pred cHH----HHHHHHHHhhcCCcccc
Confidence 444 67788889999999995
No 346
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.9e-32 Score=307.33 Aligned_cols=246 Identities=28% Similarity=0.433 Sum_probs=195.2
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|...+.||+|+||.||+|+. .+++.||+|++...........+.+..|++++++++|||++++++++.++...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 67788999999999999975 46889999998754333334456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++ ++.+.+... ...+++.++..++.+++.|+.|||+. +|+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~g-~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (317)
T cd06635 107 CLG-SASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-- 178 (317)
T ss_pred CCC-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc--
Confidence 975 676666432 34589999999999999999999999 9999999999999999999999999998754432
Q ss_pred ccccccccccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCC-CCCCCcc
Q 001494 957 NWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPR-LPIPSHN 1032 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1032 (1067)
....|++.|+|||++. .+.++.++|||||||++|||++|+.||...... .....+.... ...+.
T Consensus 179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~-- 246 (317)
T cd06635 179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNESPTLQS-- 246 (317)
T ss_pred --ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHhccCCCCCC--
Confidence 2346788999999874 456889999999999999999999997543211 1111111111 11111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
......+.+++.+||+.+|.+||++.++++.
T Consensus 247 -~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 247 -NEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred -ccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 1223358899999999999999999999874
No 347
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.3e-32 Score=311.53 Aligned_cols=259 Identities=22% Similarity=0.332 Sum_probs=196.2
Q ss_pred HhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC-----
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA----- 867 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 867 (1067)
..++|+..+.||+|+||.||+|.. .+++.||+|++...... ....+++.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN-VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC-hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 347899999999999999999965 47899999998654322 22345677899999999999999999988643
Q ss_pred -CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 868 -QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 868 -~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
...|+||||+++ ++.+.+.. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 357999999965 77777642 278889999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchh-------------
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN------------- 1013 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~------------- 1013 (1067)
+++...... ......+++.|+|||.+.+..++.++||||+||++|+|++|+.||...+........
T Consensus 164 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 164 LARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred cceeCCCCC-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 998765432 223456788999999999989999999999999999999999998643321100000
Q ss_pred -hhhhhhhccCCC--------------CCCCCcc---hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1014 -LNIALDEILDPR--------------LPIPSHN---VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1014 -~~~~~~~~~~~~--------------~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...........+ ...+... ......++.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000000000000 0000000 1122345789999999999999999999985
No 348
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3e-32 Score=299.69 Aligned_cols=244 Identities=22% Similarity=0.235 Sum_probs=187.4
Q ss_pred ccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHH---HHhcCCCCeeeeeeEEEeeCCceeEEEEecc
Q 001494 803 CIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVK---ALTEIRHRNIVKFYGFCSHAQHSFIVYEYLE 878 (1067)
Q Consensus 803 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 878 (1067)
.||+|+||.||+|.. .+++.||+|.+.............+..|.. .++...||+|+.+++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999865 568999999986543222221222334433 4455689999999999999999999999999
Q ss_pred CCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcc
Q 001494 879 MGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNW 958 (1067)
Q Consensus 879 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 958 (1067)
+++|.+++... ..+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~ 152 (278)
T cd05606 81 GGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (278)
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CC
Confidence 99999888543 4589999999999999999999999 9999999999999999999999999999765432 22
Q ss_pred ccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHH
Q 001494 959 TELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKL 1037 (1067)
Q Consensus 959 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1067)
....|+..|+|||.+.++ .++.++||||+||++|||++|+.||........ ..............+... .
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~----s 223 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----HEIDRMTLTMAVELPDSF----S 223 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch-----HHHHHHhhccCCCCCCcC----C
Confidence 345789999999998754 588999999999999999999999864422111 001111111122222222 3
Q ss_pred HHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1038 ISFVEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1038 ~~l~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
.++.+++.+|+..+|.+|| ++.++++
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 3588999999999999999 9999875
No 349
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.4e-32 Score=296.27 Aligned_cols=251 Identities=23% Similarity=0.318 Sum_probs=197.2
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCC--CChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--Cce
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLP--GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHS 870 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 870 (1067)
.+|+..+.||+|+||.||+|+. .+++.||+|++..... ......+.+.+|++++++++||||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999965 5689999998753221 1223346788999999999999999999998664 468
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++||||+++++|.+++... ..+++..+.+++.|++.|++|||+. +++||||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY---GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 8999999999999988543 3478899999999999999999999 999999999999999999999999999986
Q ss_pred cCCC---CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC-CC
Q 001494 951 LKPD---SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP-RL 1026 (1067)
Q Consensus 951 ~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1026 (1067)
.... ........++..|+|||.+.+..++.++|||||||++|||++|+.||...... .........+ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~ 228 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM-------AAIFKIATQPTKP 228 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH-------HHHHHHHcCCCCC
Confidence 5421 11223456889999999998888899999999999999999999998643221 1111111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1027 PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1027 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
..+. ....++.+++.+|++ +|.+||++.+++..
T Consensus 229 ~~p~----~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 229 MLPD----GVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCc----ccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 1222 223458999999999 57999999988753
No 350
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.8e-32 Score=302.92 Aligned_cols=259 Identities=23% Similarity=0.330 Sum_probs=200.1
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|+..+.||+|++|.||+|.. .+++.+|+|++....... .....+..|++++++++||||+++++++..++..++||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE-GIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccc-hhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 56678899999999999965 478999999987543322 3356788899999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+++ ++.+++... ...+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||.+........
T Consensus 80 ~~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 80 MDT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred cCC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 975 777777542 24689999999999999999999999 999999999999999999999999999987765543
Q ss_pred ccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------hhhhhcc------
Q 001494 957 NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------IALDEIL------ 1022 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~------ 1022 (1067)
......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||.............. .......
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 33445678899999998776 689999999999999999999999864332111000000 0000000
Q ss_pred ---CCC--CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1023 ---DPR--LPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1023 ---~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.+. .............++.+++.+||++||.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000 00001111234457899999999999999999999986
No 351
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.7e-32 Score=302.10 Aligned_cols=259 Identities=25% Similarity=0.386 Sum_probs=196.6
Q ss_pred CCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC--CceeEEE
Q 001494 798 FDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA--QHSFIVY 874 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 874 (1067)
|+..+.||+|+||.||+|... +++.||+|++.... ......+.+.+|++++++++|||++++++++.+. +..++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 567789999999999999765 58899999998654 2223346788999999999999999999999888 8999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++ ++..++.... ..+++.++..++.|+++|++|||+. +++|+||||+||++++++.+||+|||.+......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 80 EYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred ccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 99985 7887775432 4689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CC-ccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------hhhh------
Q 001494 955 SS-NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------IALD------ 1019 (1067)
Q Consensus 955 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~~~~------ 1019 (1067)
.. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||+............. ....
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence 21 2233456788999997765 4578999999999999999999999864332111000000 0000
Q ss_pred --hccCCCCCCCCc---chHH-HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1020 --EILDPRLPIPSH---NVQE-KLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1020 --~~~~~~~~~~~~---~~~~-~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+...+....+.. .... ...++.+++.+||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000000000 0001 1446889999999999999999999986
No 352
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.9e-32 Score=297.75 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=203.0
Q ss_pred CCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..++||+|+||.||+++. .+++.+|+|++....... ....++.+|++++++++||||+++++++.+....++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 477889999999999999854 478899999987543222 335677889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccC-ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 876 YLEMGSLAMILSNDA-AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|+++++|.+++.+.. ....+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 999999999885422 235689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchH
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQ 1034 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1067)
......+++.|+|||.+.+..++.++|+||+|+++|||++|+.||+...... ....+........ ..
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~---~~ 223 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--------LRYKVQRGKYPPI---PP 223 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhcCCCCCC---ch
Confidence 2223457889999999998889999999999999999999999986443211 1111111111111 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1035 EKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1035 ~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
....++.+++.+|++.+|++||++.|+++.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 334458999999999999999999999863
No 353
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=300.72 Aligned_cols=245 Identities=26% Similarity=0.336 Sum_probs=207.1
Q ss_pred cCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 801 EHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 801 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
.++||.|-||+||-|. .++|+.||||++.+..-... ....+.+|+.+++.++||.||.+...|+..+..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 5789999999999985 56899999999976544333 247789999999999999999999999999999999999976
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC---CCeEEeccccceecCCCCC
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK---NEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~---~~~kl~DfG~a~~~~~~~~ 956 (1067)
.-|+.++.. ..+.+++.....++.||+.||.|||.+ +|+|+|+||+|||+... ..+||||||+|+.++.. .
T Consensus 648 DMLEMILSs--EkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-s 721 (888)
T KOG4236|consen 648 DMLEMILSS--EKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-S 721 (888)
T ss_pred hHHHHHHHh--hcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh-h
Confidence 656666642 345688888888999999999999999 99999999999999755 36999999999988754 4
Q ss_pred ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHH
Q 001494 957 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEK 1036 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1067)
.....+|||.|.|||++..+.|...-|+||.|||+|--++|..||.... ..-+++....+..|+..+.+.
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE----------dIndQIQNAaFMyPp~PW~ei 791 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE----------DINDQIQNAAFMYPPNPWSEI 791 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc----------chhHHhhccccccCCCchhhc
Confidence 4466899999999999999999999999999999999999999986322 223455556666677777888
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHH
Q 001494 1037 LISFVEVAISCLDESPESRPTMQKVS 1062 (1067)
Q Consensus 1037 ~~~l~~li~~cl~~dP~~Rpt~~evl 1062 (1067)
.....++|...++..-.+|.+..+.+
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 88899999999999999999987754
No 354
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2e-32 Score=310.19 Aligned_cols=261 Identities=24% Similarity=0.336 Sum_probs=195.4
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeC--Cce
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHA--QHS 870 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~ 870 (1067)
.++|+..+.||+|+||.||+|... +++.||+|++...... ......+.+|+.+++++ +||||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN-ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc-chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 467888999999999999999764 6889999998643222 22345677899999999 999999999998654 368
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
|+||||++ ++|..++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999997 5888887542 578889999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-----ccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchh-------h---
Q 001494 951 LKPDSS-----NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN-------L--- 1014 (1067)
Q Consensus 951 ~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~-------~--- 1014 (1067)
...... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||............ .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 643321 2234568899999998765 45788999999999999999999998643321100000 0
Q ss_pred ---------hhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1015 ---------NIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1015 ---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
......+.................++.+++.+||+.+|++|||+.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000011000001111123458999999999999999999999863
No 355
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=5.1e-32 Score=299.85 Aligned_cols=259 Identities=23% Similarity=0.349 Sum_probs=194.7
Q ss_pred CCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC---CCCeeeeeeEEEeeCCc----
Q 001494 798 FDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI---RHRNIVKFYGFCSHAQH---- 869 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~---- 869 (1067)
|++.+.||+|+||.||+|+.+ +++.||+|++......+ .....+..|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 567889999999999999876 48999999997544322 2234566777776655 69999999999988776
Q ss_pred -eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccc
Q 001494 870 -SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIA 948 (1067)
Q Consensus 870 -~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a 948 (1067)
.+++|||+++ ++.+++.... ...+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+||+|||.+
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eeEEEehhccc-CHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 9999999975 7888775432 23589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhh-------h-h--
Q 001494 949 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNI-------A-L-- 1018 (1067)
Q Consensus 949 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~-------~-~-- 1018 (1067)
..+.... ......++..|+|||.+.+..++.++|||||||++|||++|+.||+.............. . .
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 155 RIYSFEM-ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred eeccCCc-ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence 8764332 223345788999999999888999999999999999999999998653321110000000 0 0
Q ss_pred ----hhccCCCCCC-CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1019 ----DEILDPRLPI-PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1019 ----~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.......... ......+....+.+++.+||+.||++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000000 01111233456789999999999999999999975
No 356
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.2e-32 Score=311.54 Aligned_cols=260 Identities=24% Similarity=0.361 Sum_probs=194.2
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-----
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ----- 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 868 (1067)
.++|++.++||+|+||.||+|.. .+|+.||+|++.... .......+..|+.++++++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 46799999999999999999964 578999999986421 2223466788999999999999999999876543
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIA 948 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a 948 (1067)
..|+||||+++ ++..++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 82 ~~~lv~e~~~~-~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 82 DVYIVQELMET-DLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred eEEEEehhccc-CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 57999999975 77776643 3489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC---ccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccch-------hhhhh
Q 001494 949 KFLKPDSS---NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL-------NLNIA 1017 (1067)
Q Consensus 949 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~-------~~~~~ 1017 (1067)
+....... ......|++.|+|||.+.+ ..++.++||||+||++|||++|+.||........... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 86543222 1233567899999998654 4588999999999999999999999864332110000 00000
Q ss_pred hhhccCCC-------CCCCCc-----chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1018 LDEILDPR-------LPIPSH-----NVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1018 ~~~~~~~~-------~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
...+.... ...... .......++.+++.+||+.+|++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 000000 001123458899999999999999999999863
No 357
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.5e-32 Score=294.50 Aligned_cols=248 Identities=21% Similarity=0.304 Sum_probs=190.5
Q ss_pred HHHHHhcCCCccCcc--ccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEe
Q 001494 790 EIIRATNDFDDEHCI--GKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCS 865 (1067)
Q Consensus 790 ~~~~~~~~~~~~~~l--G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 865 (1067)
+.....++|++.+.+ |+|+||.||+++. .+++.+|+|.+....... .|+.....+ +|||++++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~ 79 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVT 79 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEe
Confidence 334445667776666 9999999999864 578889999986432111 122222222 7999999999999
Q ss_pred eCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC-CeEEec
Q 001494 866 HAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN-EARVSD 944 (1067)
Q Consensus 866 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~-~~kl~D 944 (1067)
..+..|+||||+++++|.+++.... .+++.++..++.|+++|++|||+. +++||||||+||+++.++ .++|+|
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 80 TLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred cCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEec
Confidence 9999999999999999999996432 689999999999999999999999 999999999999999998 999999
Q ss_pred cccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC
Q 001494 945 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP 1024 (1067)
Q Consensus 945 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1024 (1067)
||.++..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||....... .......... ..
T Consensus 154 fg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~-~~ 225 (267)
T PHA03390 154 YGLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE---LDLESLLKRQ-QK 225 (267)
T ss_pred CccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch---hhHHHHHHhh-cc
Confidence 9999866432 23467899999999998889999999999999999999999986332211 1111111111 22
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 001494 1025 RLPIPSHNVQEKLISFVEVAISCLDESPESRPT-MQKVSQ 1063 (1067)
Q Consensus 1025 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-~~evl~ 1063 (1067)
....+. .....+.+++.+||+.+|.+||+ ++|+++
T Consensus 226 ~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 KLPFIK----NVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cCCccc----ccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 222221 23345899999999999999996 588874
No 358
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=6.3e-32 Score=304.67 Aligned_cols=255 Identities=20% Similarity=0.282 Sum_probs=190.6
Q ss_pred CccccC--CceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEecc
Q 001494 802 HCIGKG--GQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLE 878 (1067)
Q Consensus 802 ~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 878 (1067)
..||+| +||+||+++. .+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++..++..++||||++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 346666 9999999976 47999999998754322 2334678899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcc
Q 001494 879 MGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNW 958 (1067)
Q Consensus 879 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 958 (1067)
++++.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+..........
T Consensus 83 ~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 83 YGSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 999999886543 23488999999999999999999999 99999999999999999999999998654332211110
Q ss_pred -------ccccccccccCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------------h
Q 001494 959 -------TELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------------I 1016 (1067)
Q Consensus 959 -------~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------------~ 1016 (1067)
....++..|+|||++.+. .++.++||||+||++|||++|+.||.............. .
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 112345679999998764 478999999999999999999999864332110000000 0
Q ss_pred hhh------------------------hccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1017 ALD------------------------EILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1017 ~~~------------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
... .+..... ..........++.+++++||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERL--RTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccc--cchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000 0000000 01112234557899999999999999999999975
No 359
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.7e-32 Score=310.44 Aligned_cols=262 Identities=21% Similarity=0.286 Sum_probs=196.6
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC-----C
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA-----Q 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 868 (1067)
.++|...+.||+|+||+||+|+. .+++.||||++....... .....+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR-IDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 35788999999999999999864 578999999987543222 2245677899999999999999999987654 3
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIA 948 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a 948 (1067)
..|+||||+. ++|.+++... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 5799999996 6788887532 4589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccch---------------
Q 001494 949 KFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL--------------- 1012 (1067)
Q Consensus 949 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~--------------- 1012 (1067)
+.............++..|+|||.+.. ..++.++|||||||++|+|++|+.||...........
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 876544333344567889999998765 4588999999999999999999999864322100000
Q ss_pred ----hhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1013 ----NLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1013 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
..........................++.+++.+||+.+|++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000000000000000000011233458899999999999999999999864
No 360
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.4e-32 Score=303.96 Aligned_cols=248 Identities=28% Similarity=0.440 Sum_probs=194.0
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
.|+..+.||+|+||.||+|+.. +++.||+|.+...........+++.+|+++++.++|||++++++++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 4667788999999999999754 678899999864333333345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+. |++.+.+... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++......
T Consensus 96 ~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 96 YCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred ccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 997 5777666422 23578999999999999999999999 9999999999999999999999999999765432
Q ss_pred CccccccccccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 956 SNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
....+++.|+|||.+. ...++.++|||||||++|||++|+.||....... ....+.....+ ...
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~~~~--~~~ 235 (308)
T cd06634 169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--------ALYHIAQNESP--ALQ 235 (308)
T ss_pred ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH--------HHHHHhhcCCC--CcC
Confidence 2346788999999874 3457889999999999999999999975432211 00111111111 000
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.......+.+++.+||+.+|++||++.++++.
T Consensus 236 ~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred cccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 11223458899999999999999999999864
No 361
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.9e-32 Score=304.15 Aligned_cols=264 Identities=25% Similarity=0.379 Sum_probs=196.1
Q ss_pred HHhcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC---
Q 001494 793 RATNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ--- 868 (1067)
Q Consensus 793 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--- 868 (1067)
...++|+..+.||+|+||.||+|... +|+.||+|++...... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 34578999999999999999999765 6889999998754322 223456778999999999999999999987654
Q ss_pred -------ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeE
Q 001494 869 -------HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEAR 941 (1067)
Q Consensus 869 -------~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~k 941 (1067)
..++||||+++ ++...+... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999986 666666432 34589999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCC-ccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhh---
Q 001494 942 VSDFGIAKFLKPDSS-NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNI--- 1016 (1067)
Q Consensus 942 l~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~--- 1016 (1067)
|+|||.+........ ......++..|+|||.+.+. .++.++||||+||++|||++|+.||...............
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGS 236 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 999999987654332 22334567889999987653 4788999999999999999999998643321111000000
Q ss_pred ----hhhhcc--------CCCCCCCC---cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1017 ----ALDEIL--------DPRLPIPS---HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1017 ----~~~~~~--------~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+. ++...... .........+.+++.+||+.+|++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000 00000000 000012345899999999999999999999985
No 362
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6.1e-32 Score=302.51 Aligned_cols=246 Identities=28% Similarity=0.429 Sum_probs=193.1
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|...++||+|+||+||+|+. .+++.||+|++...........+.+.+|+++++.++|||++++++++.+....|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55667899999999999965 47889999998754433444456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
+. |++.+++... ...+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 96 4666666432 34588999999999999999999999 999999999999999999999999999864332
Q ss_pred ccccccccccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 957 NWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||.......... .......+... .
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~-----~ 242 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-----HIAQNDSPTLQ-----S 242 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH-----HHHhcCCCCCC-----c
Confidence 23456888999999874 3568889999999999999999999976433211110 00000011111 1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1034 QEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
......+.+++.+||+.+|.+||++.++++
T Consensus 243 ~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 243 NEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112234889999999999999999999985
No 363
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.8e-32 Score=309.91 Aligned_cols=261 Identities=24% Similarity=0.345 Sum_probs=196.7
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee----CCc
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH----AQH 869 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~ 869 (1067)
..+|+..+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|+.++++++||||+++++++.. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV-PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc-ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 36788999999999999999964 57999999998754322 2234667789999999999999999998753 346
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccce
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAK 949 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~ 949 (1067)
.++||||+. +++.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSD---QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEEehhh-hhHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 899999996 5888888533 3489999999999999999999999 99999999999999999999999999997
Q ss_pred ecCCCCC----ccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccch-------hhh--
Q 001494 950 FLKPDSS----NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL-------NLN-- 1015 (1067)
Q Consensus 950 ~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~-------~~~-- 1015 (1067)
....... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 6543221 1234578899999998765 4588999999999999999999999865432110000 000
Q ss_pred ------hhhhhc---cCCCCCCCC-cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1016 ------IALDEI---LDPRLPIPS-HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1016 ------~~~~~~---~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+. .......+. ........++.+++.+||+.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000000 011111110 001122456899999999999999999999886
No 364
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.9e-32 Score=299.94 Aligned_cols=256 Identities=21% Similarity=0.263 Sum_probs=191.0
Q ss_pred CCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeC--CceeEE
Q 001494 798 FDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHA--QHSFIV 873 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 873 (1067)
|+..++||+|+||.||+|.. .+++.||+|++........ ......|+..++++. |||++++++++.+. +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE--QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch--hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 56778999999999999965 4789999999875432221 234457888888885 99999999999887 899999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++ ++.+.+... ...+++.++..++.|++.|++|||+. +++||||||+||+++. +.+||+|||+++....
T Consensus 79 ~e~~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 79 FELMDM-NLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred EecCCc-cHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 999975 777666432 24589999999999999999999999 9999999999999999 9999999999987643
Q ss_pred CCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchh-------hhhhhhhc---c
Q 001494 954 DSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN-------LNIALDEI---L 1022 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~-------~~~~~~~~---~ 1022 (1067)
.. ......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||............ ........ .
T Consensus 152 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 152 KP-PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred CC-CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 32 2233567889999997644 45788999999999999999999998654321100000 00000000 0
Q ss_pred CCCCCCCCcc-------hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1023 DPRLPIPSHN-------VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1023 ~~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
......+... ......++.+++.+||+.+|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0001111100 1123456899999999999999999999986
No 365
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.8e-32 Score=304.12 Aligned_cols=258 Identities=18% Similarity=0.230 Sum_probs=190.4
Q ss_pred ccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccC
Q 001494 800 DEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 800 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
+++.+|.|+++.||++.. +++.||||++..... .....+.+..|++++++++||||+++++++.+.+..+++|||+++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 344455555655555544 699999999875422 223456799999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC---
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS--- 956 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~--- 956 (1067)
+++.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+|++|||.+........
T Consensus 84 ~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 84 GSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 99999986432 23478899999999999999999999 999999999999999999999999999875542211
Q ss_pred ----ccccccccccccCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhh----------
Q 001494 957 ----NWTELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDE---------- 1020 (1067)
Q Consensus 957 ----~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~---------- 1020 (1067)
......++..|+|||++.+. .++.++|||||||++|||++|+.||...................
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 11234567789999988763 57889999999999999999999986543211100000000000
Q ss_pred ----------ccCCCC--CCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1021 ----------ILDPRL--PIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1021 ----------~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+.. ..+.........++.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000000 0011111223346889999999999999999999986
No 366
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=283.69 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=203.9
Q ss_pred HhcCCCccCccccCCceeEEEEEEC------CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA 867 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 867 (1067)
...+++....+-+|.||.||.|.++ +.+.|-||.++... ..-+...++.|...+..+.|||+.++.+++.++
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~ 359 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGASHPNLLSVLGVSIED 359 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCcCCCccceeEEEeec
Confidence 3456777788999999999999443 34456677775432 223356788999999999999999999998655
Q ss_pred -CceeEEEEeccCCCHHHHhc-----ccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeE
Q 001494 868 -QHSFIVYEYLEMGSLAMILS-----NDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEAR 941 (1067)
Q Consensus 868 -~~~~lv~E~~~~g~L~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~k 941 (1067)
+.++++|.++.-|+|..++. +......++..+...++.|++.|++|||++ +|||.||.++|.+||+.-++|
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVk 436 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVK 436 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEE
Confidence 57899999999999999997 333344577788899999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcc--ccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhh
Q 001494 942 VSDFGIAKFLKPDSSNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIAL 1018 (1067)
Q Consensus 942 l~DfG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1018 (1067)
++|-.+++.+-+.++.. .....+..||+||.+....|+.++|||||||++|||+| |+.||..+++++...+
T Consensus 437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y------ 510 (563)
T KOG1024|consen 437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY------ 510 (563)
T ss_pred eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH------
Confidence 99999999887665432 22345678999999999999999999999999999998 9999987776543221
Q ss_pred hhccCC-CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1019 DEILDP-RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1019 ~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
+.++ ++..|..+.+ +++.+|..||..+|++||+++|++.-|
T Consensus 511 --lkdGyRlaQP~NCPD----eLf~vMacCWallpeeRPsf~Qlv~cL 552 (563)
T KOG1024|consen 511 --LKDGYRLAQPFNCPD----ELFTVMACCWALLPEERPSFSQLVICL 552 (563)
T ss_pred --HhccceecCCCCCcH----HHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 2222 2223333333 489999999999999999999998765
No 367
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3.4e-32 Score=301.25 Aligned_cols=256 Identities=23% Similarity=0.316 Sum_probs=198.7
Q ss_pred CCCccCccccCCceeEEEEEE----CCCcEEEEEEeCCCCC-CChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCce
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL----ASGEIIAVKKFHSPLP-GEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 870 (1067)
+|+..+.||+|+||.||+++. .+++.||||++..... ......+.+..|+++++++ +||+|+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477789999999999999864 3578899999864321 1222345678999999999 599999999999999999
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++||||+++++|.+++... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.++++|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 9999999999999988532 3578899999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCc-cccccccccccCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 951 LKPDSSN-WTELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 951 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
....... .....|+..|+|||.+.+.. .+.++||||||+++|||++|+.||........ .......+......
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~----~~~~~~~~~~~~~~ 230 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS----QSEISRRILKSKPP 230 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch----HHHHHHHHHccCCC
Confidence 5443222 22346789999999887655 68899999999999999999999853221110 11111122222222
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.+... ...+.+++.+||+.+|++|||+.++.+.++
T Consensus 231 ~~~~~----~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 231 FPKTM----SAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred CCccc----CHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 22222 234789999999999999999988877664
No 368
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.1e-32 Score=299.58 Aligned_cols=253 Identities=23% Similarity=0.303 Sum_probs=196.0
Q ss_pred CCCccCccccCCceeEEEEEE----CCCcEEEEEEeCCCCC-CChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCce
Q 001494 797 DFDDEHCIGKGGQGSVYKVEL----ASGEIIAVKKFHSPLP-GEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 870 (1067)
+|++.+.||+|+||.||+|+. .+|+.||+|++..... ......+.+..|+++++++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999875 3789999999864322 1223346678899999999 599999999999999999
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++||||+++++|.+++... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 9999999999999998543 3578889999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC-CccccccccccccCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 951 LKPDS-SNWTELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 951 ~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
..... .......|+..|+|||.+.+. .++.++||||||+++|+|++|+.||...... .........+......
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~----~~~~~~~~~~~~~~~~ 230 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSEPP 230 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc----ccHHHHHHHhhccCCC
Confidence 54332 122345688999999988753 3678999999999999999999998632211 0111111222222222
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRP-----TMQKVSQ 1063 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~ 1063 (1067)
.+.. ....+.+++.+||+.+|++|| ++.++++
T Consensus 231 ~~~~----~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 231 YPQE----MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CCcc----CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 2222 223488999999999999997 6666654
No 369
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=3.8e-32 Score=302.02 Aligned_cols=252 Identities=26% Similarity=0.401 Sum_probs=192.7
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 873 (1067)
++|+..+.||+|+||.||+|... +++.||||++...... ....++..|+.++.+. +||||+++++++.++...|+|
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 56888999999999999999876 4899999998754222 2345667787766666 599999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
|||+++ ++....... ...+++..+..++.|++.|++|||+.. +|+||||+|+||+++.++.+||+|||++..+..
T Consensus 93 ~e~~~~-~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 93 MELMST-CLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred eeccCc-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 999864 676666432 236899999999999999999999732 899999999999999999999999999976543
Q ss_pred CCCccccccccccccCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC-C
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP-I 1028 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 1028 (1067)
.. ......+++.|+|||.+.+.. ++.++||||||+++|||++|+.||...... ......+...... .
T Consensus 168 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~ 239 (296)
T cd06618 168 SK-AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEEPPSL 239 (296)
T ss_pred CC-cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCCCCCC
Confidence 22 223345788999999987554 788999999999999999999998642211 1111111111111 1
Q ss_pred CCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1029 PSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1029 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
+.. .....++.+++.+||+.||++||++.++++.
T Consensus 240 ~~~--~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 240 PPN--EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCC--CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 1123358999999999999999999999763
No 370
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=6.9e-32 Score=292.25 Aligned_cols=242 Identities=27% Similarity=0.354 Sum_probs=198.6
Q ss_pred cccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCH
Q 001494 804 IGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSL 882 (1067)
Q Consensus 804 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 882 (1067)
||+|+||.||++... +++.||+|++.............+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999765 5899999998765444434566789999999999999999999999999999999999999999
Q ss_pred HHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcccccc
Q 001494 883 AMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTELA 962 (1067)
Q Consensus 883 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 962 (1067)
.+++.... .+++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++++|||.+..............
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 99985432 488999999999999999999998 999999999999999999999999999987654433334566
Q ss_pred ccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHH
Q 001494 963 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVE 1042 (1067)
Q Consensus 963 gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1042 (1067)
++..|+|||...+...+.++|+||||+++||+++|+.||+..+. ......+.......+... ...+.+
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~l~~ 222 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILKDPLRFPEFL----SPEARD 222 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhcCCCCCCCCC----CHHHHH
Confidence 78899999999888889999999999999999999999864332 112222222333333332 234889
Q ss_pred HHHhccCCCCCCCCCH---HHHHH
Q 001494 1043 VAISCLDESPESRPTM---QKVSQ 1063 (1067)
Q Consensus 1043 li~~cl~~dP~~Rpt~---~evl~ 1063 (1067)
++.+||..||++||++ .++.+
T Consensus 223 ~i~~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 223 LISGLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred HHHHHhcCCHhhCCCcccHHHHHh
Confidence 9999999999999999 55543
No 371
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-33 Score=280.42 Aligned_cols=252 Identities=24% Similarity=0.338 Sum_probs=208.0
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 872 (1067)
.++|+..++||+|+|+.|..+++ ++.+.||+|++++....+.+...-...|-.+..+. +||.+|.+..+|..+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 46799999999999999999975 46788999999876554443344455666666555 79999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
|.||++||+|-..+++.+ .++++.+..+...|+-||.|||++ ||++||+|.+|||+|..|++|++|||+++.--
T Consensus 329 vieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999977775433 489999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
.+....++++|||.|+|||.+.+..|+..+|.|++||+++||+.|+.|||...............++-++...+.+|...
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl 482 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL 482 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee
Confidence 66677788999999999999999999999999999999999999999998765322222222334445556666666554
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCC
Q 001494 1033 VQEKLISFVEVAISCLDESPESRP 1056 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rp 1056 (1067)
... ...++..-+++||++|.
T Consensus 483 svk----as~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 483 SVK----ASHVLKGFLNKDPKERL 502 (593)
T ss_pred ehh----hHHHHHHhhcCCcHHhc
Confidence 433 56777888999999985
No 372
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5e-32 Score=303.59 Aligned_cols=262 Identities=23% Similarity=0.337 Sum_probs=192.1
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-----
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ----- 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 868 (1067)
.++|+..++||+|+||.||+|... +++.||||++....... .....+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 357899999999999999999654 78999999986543222 22345678999999999999999999987654
Q ss_pred ---ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecc
Q 001494 869 ---HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDF 945 (1067)
Q Consensus 869 ---~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~Df 945 (1067)
..++||||+.+ ++.+.+... ...+++.++..++.|++.|++|||++ +++||||||+||+++.++.+||+||
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSNK--NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 34999999975 777776432 23589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCC----ccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhh----
Q 001494 946 GIAKFLKPDSS----NWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNI---- 1016 (1067)
Q Consensus 946 G~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~---- 1016 (1067)
|++........ ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||...............
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99986643221 122345778899999876654 688999999999999999999998654321110000000
Q ss_pred ---hhhhcc----CCCCCCCCcc---hH------HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1017 ---ALDEIL----DPRLPIPSHN---VQ------EKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1017 ---~~~~~~----~~~~~~~~~~---~~------~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...... ......+... .. .....+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 000000 0000000000 00 01134679999999999999999999985
No 373
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.98 E-value=4e-32 Score=307.07 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=198.8
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-----ce
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ-----HS 870 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 870 (1067)
+|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+ ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 4788899999999999999765 589999999875432 2234567889999999999999999999987775 78
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
|+||||++ +++.+++... ..+++..+..++.+++.|++|||+. ||+||||||+||+++.++.++|+|||.+..
T Consensus 80 ~lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 80 YIVTELME-TDLHKVIKSP---QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEEecchh-hhHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 99999998 4788887543 2689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC---CccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------h---
Q 001494 951 LKPDS---SNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------I--- 1016 (1067)
Q Consensus 951 ~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~--- 1016 (1067)
..... .......+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||.............. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 65543 123445678899999999887 789999999999999999999999864432110000000 0
Q ss_pred -----hhhhccC---CCCCCC-CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1017 -----ALDEILD---PRLPIP-SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1017 -----~~~~~~~---~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....... .....+ ..........+.+++.+||+.+|.+||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0000000 000000 0000112345889999999999999999999986
No 374
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=9.2e-32 Score=327.88 Aligned_cols=148 Identities=26% Similarity=0.366 Sum_probs=132.5
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|.+.++||+|+||.||+|... +++.||||++.............+..|+.+++.++||||+++++++...+..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999765 78999999997543334444577889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccce
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAK 949 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~ 949 (1067)
||+++++|.+++... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~---~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY---GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999998543 3478889999999999999999999 99999999999999999999999999885
No 375
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-32 Score=254.56 Aligned_cols=260 Identities=22% Similarity=0.340 Sum_probs=199.4
Q ss_pred CCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|+..++||+|.||+||+|+ ..+++.||+|+++....++ .......+|+-+++.++|.|||+++++...+....+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddde-gvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC-CCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 46677899999999999996 4578999999998654433 335667899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
||+. +|..+. +...+.++.+.+..++.|+++|+.++|++ .+.|||+||+|.+|+.+|+.|++|||+|+.++-+.
T Consensus 82 ~cdq-dlkkyf--dslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 82 FCDQ-DLKKYF--DSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred HhhH-HHHHHH--HhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 9975 676666 23456688899999999999999999999 99999999999999999999999999999988776
Q ss_pred CccccccccccccCccccccCC-CCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhh-------hhhhhccC-CC
Q 001494 956 SNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLN-------IALDEILD-PR 1025 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~-------~~~~~~~~-~~ 1025 (1067)
..++..+.|.+|++|.++.+.+ |+...|+||.|||+.|+.. |++-|.+.+.......... .....+.. +.
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 6677778899999999998876 8999999999999999997 5544544332211110000 00000000 00
Q ss_pred C---CC-C-CcchHHHH----HHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1026 L---PI-P-SHNVQEKL----ISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1026 ~---~~-~-~~~~~~~~----~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. ++ | ...+.... ..-+++++..+.-+|.+|.++++.++
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 0 00 0 01111111 23478888899999999999999876
No 376
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=7.4e-32 Score=293.82 Aligned_cols=252 Identities=23% Similarity=0.292 Sum_probs=196.0
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCC--ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPG--EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
+|.+.++||+|+||.||++... .+..+++|+++..... ......++..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778899999999999998654 3455666665532211 112234566789999999999999999999999999999
Q ss_pred EEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 874 YEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
|||++++++.+++... .....+++.+++.++.|++.|++|||+. +++|+||||+||+++. +.++++|||.++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999888542 2345689999999999999999999999 9999999999999975 679999999998765
Q ss_pred CCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcc
Q 001494 953 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHN 1032 (1067)
Q Consensus 953 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1067)
..........|++.|+|||...+..++.++||||||+++|+|++|..||+..... ...........+..
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~--- 225 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL--------SVVLRIVEGPTPSL--- 225 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHcCCCCCC---
Confidence 4443334456788999999988888899999999999999999999998632211 11111111111111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1033 VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1033 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
......++.+++.+||+.+|++||++.|+++
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 226 PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 1123345889999999999999999999986
No 377
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.98 E-value=8.7e-32 Score=305.35 Aligned_cols=264 Identities=22% Similarity=0.315 Sum_probs=197.3
Q ss_pred HHHHHHHhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee
Q 001494 788 YEEIIRATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH 866 (1067)
Q Consensus 788 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 866 (1067)
.+++....++|+..+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+.++++++||||+++++++..
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-hHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 455666778999999999999999999964 57899999998754322 2234567889999999999999999998864
Q ss_pred C------CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCe
Q 001494 867 A------QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEA 940 (1067)
Q Consensus 867 ~------~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~ 940 (1067)
. ...++++|++ ++++.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCE
Confidence 3 3467888876 7789887743 2488999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchh------
Q 001494 941 RVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN------ 1013 (1067)
Q Consensus 941 kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~------ 1013 (1067)
||+|||+++.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||............
T Consensus 160 kl~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (345)
T cd07877 160 KILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236 (345)
T ss_pred EEecccccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9999999976432 2234567889999998766 46788999999999999999999998543221100000
Q ss_pred -hhhhhhhccCC-------C-CCCCCcch----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1014 -LNIALDEILDP-------R-LPIPSHNV----QEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1014 -~~~~~~~~~~~-------~-~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.......+.+. . ...+.... .....++.+++.+|++.||++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 00000000000 0 00000000 011235789999999999999999999875
No 378
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.98 E-value=1.1e-31 Score=302.17 Aligned_cols=260 Identities=25% Similarity=0.365 Sum_probs=196.2
Q ss_pred HHHhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee-CCc
Q 001494 792 IRATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH-AQH 869 (1067)
Q Consensus 792 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 869 (1067)
...+++|+..+.||+|+||.||+|.. .+++.||+|++....... ...+.+..|++++++++||||+++.+++.. ...
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP-VLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 44678899999999999999999964 489999999986543222 234667889999999999999999998865 557
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccce
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAK 949 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~ 949 (1067)
.++||||+ ++++..+++. ..+++..+..++.|+++|++|||+. +|+||||+|+||+++.++.++|+|||.++
T Consensus 85 ~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 89999998 4688888743 2467888889999999999999999 99999999999999999999999999997
Q ss_pred ecCCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccch-------hhhhhhhhc
Q 001494 950 FLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL-------NLNIALDEI 1021 (1067)
Q Consensus 950 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~-------~~~~~~~~~ 1021 (1067)
.... ......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||........... .........
T Consensus 157 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 157 IQDP---QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred ccCC---CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 5432 2233467889999998766 5689999999999999999999999864332110000 000000000
Q ss_pred cC-----------CCCCCCC-cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1022 LD-----------PRLPIPS-HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1022 ~~-----------~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.+ .....+. ........++.+++.+|++.+|++|||+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0000010 000112346899999999999999999999875
No 379
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=1.2e-31 Score=303.53 Aligned_cols=261 Identities=21% Similarity=0.252 Sum_probs=192.6
Q ss_pred cCCC-ccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCCh-----------hHHHHHHHHHHHHhcCCCCeeeeeeE
Q 001494 796 NDFD-DEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEM-----------TFQQEFLNEVKALTEIRHRNIVKFYG 862 (1067)
Q Consensus 796 ~~~~-~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~l~~ 862 (1067)
++|. ..+.||+|+||+||+|.. .+++.||||++........ .....+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4554 457799999999999965 4789999999864322110 01125778999999999999999999
Q ss_pred EEeeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEE
Q 001494 863 FCSHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARV 942 (1067)
Q Consensus 863 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl 942 (1067)
++..++..++||||++ |++.+++.. ...+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.+|+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 9999999999999997 588888853 23488999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCC--------------CCCccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCccccc
Q 001494 943 SDFGIAKFLKP--------------DSSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLI 1007 (1067)
Q Consensus 943 ~DfG~a~~~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~ 1007 (1067)
+|||.++.... .........+++.|+|||.+.+.. ++.++||||+||++|||++|+.||......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999986651 111222345678899999887643 688999999999999999999998644321
Q ss_pred cccchhhh-------hhhhhcc-----CCCCCCCCcc----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1008 SSSSLNLN-------IALDEIL-----DPRLPIPSHN----VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1008 ~~~~~~~~-------~~~~~~~-----~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
........ ....+.. .+.....+.. ......++.+++.+|++.+|++|||+.|++.
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 11000000 0000000 0000000000 0112345889999999999999999999985
No 380
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=9.3e-32 Score=296.95 Aligned_cols=259 Identities=24% Similarity=0.347 Sum_probs=198.7
Q ss_pred CCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|+..+.||+|++|.||+|... +++.||+|++..... .....+.+..|+.++++++|||++++++++.+.+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-EEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 556788999999999999765 589999999876532 223346778899999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS 956 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 956 (1067)
++ ++|.+++.... ..+++..+.+++.+++.|++|||++ +|+||||+|+||+++.++.+||+|||.++.......
T Consensus 80 ~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 80 CD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred cC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 98 58999886432 3589999999999999999999999 999999999999999999999999999987655443
Q ss_pred ccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh-------hhhh---hhc----
Q 001494 957 NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL-------NIAL---DEI---- 1021 (1067)
Q Consensus 957 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~-------~~~~---~~~---- 1021 (1067)
......++..|+|||.+.+. .++.++|||||||++||+++|+.||............. .... ...
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 34445567889999988766 78999999999999999999999986433211100000 0000 000
Q ss_pred -cCCCCCCCC--cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1022 -LDPRLPIPS--HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1022 -~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..+...... .........+.+++.+||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000000 000111346899999999999999999999975
No 381
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=2.4e-31 Score=293.79 Aligned_cols=258 Identities=24% Similarity=0.351 Sum_probs=194.3
Q ss_pred CCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCceeEEEE
Q 001494 798 FDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E 875 (1067)
|++.+.||+|++|+||+|... +++.||+|++....... ......+|+..+++++ |||++++++++.+++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW--EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch--hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 567789999999999999875 57899999986543221 1234557899999998 9999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
|+ +|++.+++.... ...+++.++..++.|++.|++|||++ +++|+||+|+||+++.++.++|+|||.++......
T Consensus 79 ~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 79 YM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred cC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 99 778988885433 24589999999999999999999999 99999999999999999999999999998765322
Q ss_pred CccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccch-------------hhhhhhhhc
Q 001494 956 SNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL-------------NLNIALDEI 1021 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~-------------~~~~~~~~~ 1021 (1067)
......++..|+|||++.+ ..++.++|+||||+++|||++|+.||........... .........
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 154 -PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred -CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 2234567889999998754 4578999999999999999999999854332110000 000000000
Q ss_pred cCCCCCCCC-cc----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1022 LDPRLPIPS-HN----VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1022 ~~~~~~~~~-~~----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
......... .. .......+.+++.+||+.+|++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000 00 0011245889999999999999999999976
No 382
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1.2e-31 Score=303.85 Aligned_cols=256 Identities=21% Similarity=0.351 Sum_probs=191.8
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-----
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ----- 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 868 (1067)
..+|...+.||+|+||.||+|.. .+|+.||+|++......+ .....+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE-IFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-cchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 36899999999999999999975 578999999987543222 23456789999999999999999999986543
Q ss_pred -ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccc
Q 001494 869 -HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGI 947 (1067)
Q Consensus 869 -~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~ 947 (1067)
..++|+||+.. ++..+.. ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+|++|||+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred ceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 46999999964 6666542 2478899999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------hhh-
Q 001494 948 AKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------IAL- 1018 (1067)
Q Consensus 948 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~~~- 1018 (1067)
++.... ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.............. ...
T Consensus 164 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 164 ARHADA---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CcCCCC---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 976432 2234567889999998876 4588999999999999999999999875332110000000 000
Q ss_pred -------hhccCCCCCCCCcc----hHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1019 -------DEILDPRLPIPSHN----VQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1019 -------~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..........+... .......+.+++.+||+.||++||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000000000000 0112235789999999999999999999985
No 383
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.2e-31 Score=304.10 Aligned_cols=259 Identities=21% Similarity=0.324 Sum_probs=195.2
Q ss_pred HHhcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC---
Q 001494 793 RATNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ--- 868 (1067)
Q Consensus 793 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--- 868 (1067)
...++|+..+.||+|+||.||+|. ..+++.||||++..... .....+.+.+|++++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 346789999999999999999985 55799999999865322 2233456889999999999999999999987654
Q ss_pred ---ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecc
Q 001494 869 ---HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDF 945 (1067)
Q Consensus 869 ---~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~Df 945 (1067)
..++||||+ ++++.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 458999999 6788888743 3588999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchh-------hhhh
Q 001494 946 GIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN-------LNIA 1017 (1067)
Q Consensus 946 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~-------~~~~ 1017 (1067)
|++...... .....+++.|+|||.+.+ ..++.++|+||+||++|++++|+.||............ ....
T Consensus 163 g~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 163 GLARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEF 239 (343)
T ss_pred ccccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 999865432 234467889999998876 45788999999999999999999998643321100000 0000
Q ss_pred hhhc--------cC--CCCCCC--CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1018 LDEI--------LD--PRLPIP--SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1018 ~~~~--------~~--~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+ .. +..... .........++.+++.+|++.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 240 VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 00 000000 0000112235889999999999999999999874
No 384
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=7.8e-32 Score=302.18 Aligned_cols=262 Identities=24% Similarity=0.345 Sum_probs=191.5
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-----
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ----- 868 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 868 (1067)
.++|+..++||+|+||.||+|... +++.||+|++......+. ....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-FPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-cchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 468999999999999999999754 689999999864432221 2345678999999999999999999875433
Q ss_pred ---ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecc
Q 001494 869 ---HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDF 945 (1067)
Q Consensus 869 ---~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~Df 945 (1067)
..++||||+++ ++...+.. ....+++.++..++.|+++|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 46999999975 56655533 234589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCc-----------cccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchh
Q 001494 946 GIAKFLKPDSSN-----------WTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLN 1013 (1067)
Q Consensus 946 G~a~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~ 1013 (1067)
|+++........ .+...+++.|+|||.+.+. .++.++|||||||++|||++|+.||............
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999765432211 1234567889999987654 5789999999999999999999998643321100000
Q ss_pred hhh-------------hhhh----ccCCCCCCC-CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1014 LNI-------------ALDE----ILDPRLPIP-SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1014 ~~~-------------~~~~----~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
... .... ......+.. ..........+.+++.+|++.+|++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 000 0000 000000000 0000111245889999999999999999999875
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-32 Score=286.37 Aligned_cols=256 Identities=28% Similarity=0.403 Sum_probs=194.9
Q ss_pred cCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCC----ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee-CCc
Q 001494 796 NDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPG----EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH-AQH 869 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 869 (1067)
++|-..+.||+|||+.||+| ++...+.||||+-...... ...+.+...+|.++.+.++||.||++++|+.- .+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 45677889999999999998 5666889999986533211 11233457789999999999999999999964 467
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeC---CCCCeEEeccc
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLD---FKNEARVSDFG 946 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~---~~~~~kl~DfG 946 (1067)
+|-|+|||+|.+|+.+++..+ -+++.++..|+.||+.||.||.+. .|+|||=|+||.|||+- .-|.+||+|||
T Consensus 543 FCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 899999999999999996544 489999999999999999999998 45899999999999994 34789999999
Q ss_pred cceecCCCCCc-------cccccccccccCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCcccccccc-chhh
Q 001494 947 IAKFLKPDSSN-------WTELAGTYGYVAPELAYTM----KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSS-SLNL 1014 (1067)
Q Consensus 947 ~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~-~~~~ 1014 (1067)
+++.+..+++. ....+||.+|.+||.+.-+ ..+.|+||||.|||+|+.+.|+.||......... ..+.
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT 698 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT 698 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc
Confidence 99988766543 2357899999999976543 3678999999999999999999998643221110 0111
Q ss_pred hhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 001494 1015 NIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVS 1062 (1067)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl 1062 (1067)
-....++. ++..+.. ..+...+|++|++.--++|.+..++.
T Consensus 699 IlkAtEVq---FP~KPvV----sseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 699 ILKATEVQ---FPPKPVV----SSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hhcceecc---CCCCCcc----CHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 11111221 1111222 22478899999999999998887764
No 386
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.3e-33 Score=320.61 Aligned_cols=252 Identities=24% Similarity=0.295 Sum_probs=201.8
Q ss_pred HhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeE
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 872 (1067)
..++|.+.++||+|+||.|..++. .+++.||.|++.+-.--......-|..|-.+|..-+.+-|+.++-+|.++.++|+
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence 357899999999999999999975 5789999999864211111224568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
|||||+||+|-..+.... .+++..+..++..|+-||.-+|+- |+|||||||+|||+|..|++|++|||.+-.+.
T Consensus 153 VMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred EEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhcC
Confidence 999999999999996544 588999999999999999999999 99999999999999999999999999998877
Q ss_pred CCCC-ccccccccccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC--
Q 001494 953 PDSS-NWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP-- 1024 (1067)
Q Consensus 953 ~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 1024 (1067)
.++. .....+|||.|++||++.. +.|++.+|.||+||++|||+.|..||-..... .....+++-
T Consensus 227 ~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv--------eTY~KIm~hk~ 298 (1317)
T KOG0612|consen 227 ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV--------ETYGKIMNHKE 298 (1317)
T ss_pred CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH--------HHHHHHhchhh
Confidence 5543 4556899999999998752 56899999999999999999999998533321 112222222
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCC---HHHHH
Q 001494 1025 RLPIPSHNVQEKLISFVEVAISCLDESPESRPT---MQKVS 1062 (1067)
Q Consensus 1025 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt---~~evl 1062 (1067)
.+.+|. ..+.+.+..++|.+.+. +|+.|.. +.++.
T Consensus 299 ~l~FP~--~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 299 SLSFPD--ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred hcCCCc--ccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 334441 12244568888888775 6788876 66654
No 387
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-32 Score=257.26 Aligned_cols=204 Identities=25% Similarity=0.406 Sum_probs=169.0
Q ss_pred hcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhc-CCCCeeeeeeEEEeeCCceeE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTE-IRHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~l 872 (1067)
.++......||+|++|.|-+.++ .+|+..|+|++...... ..+++.+.|+.+..+ ..+|.+|.++|.+.+++..|+
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~--q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS--QEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcCh--HHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 34555667899999999998865 58999999999876543 346778889887544 479999999999999999999
Q ss_pred EEEeccCCCHHHHhccc-CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 873 VYEYLEMGSLAMILSND-AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
.||.|+. +++.+.++- .....+++.-.-+||..+.+|+.|||++- .|+|||+||+|||++.+|++|+||||++..+
T Consensus 123 cME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 123 CMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYL 199 (282)
T ss_pred eHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceee
Confidence 9999974 776665432 33456888889999999999999999985 8999999999999999999999999999887
Q ss_pred CCCCCccccccccccccCcccccc----CCCCccchhHHHHHHHHHHHhCCCCCCcc
Q 001494 952 KPDSSNWTELAGTYGYVAPELAYT----MKVTEKCDVYSFGVLALEVIKGKHPGDFI 1004 (1067)
Q Consensus 952 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslGvil~elltg~~p~~~~ 1004 (1067)
.+. -..+-.+|...|||||.+.. ..|+.|+||||+|+.++||.+++.||+.+
T Consensus 200 ~dS-iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 200 VDS-IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred hhh-hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 643 22233567788999998753 36899999999999999999999998743
No 388
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.4e-32 Score=298.68 Aligned_cols=239 Identities=23% Similarity=0.290 Sum_probs=191.7
Q ss_pred hcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 872 (1067)
++.|.....+|.|+|++|-.+. ..+++..|||++.....+ -.+|+.++... +|||++++.+.+.+..+.|+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~-------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD-------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccccc-------cccccchhhhhcCCCcceeecceecCCceeee
Confidence 4567777789999999998874 567889999999765222 23566565555 79999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceee-CCCCCeEEeccccceec
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLL-DFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill-~~~~~~kl~DfG~a~~~ 951 (1067)
|||++.|+-+.+.+..... .. ..+..|+.+|+.|+.|||++ ||||||+||+|||+ +..++++|+|||.++..
T Consensus 394 v~e~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSEL 466 (612)
T ss_pred eehhccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhC
Confidence 9999999988776643222 22 66778999999999999999 99999999999999 68999999999999887
Q ss_pred CCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCc
Q 001494 952 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSH 1031 (1067)
Q Consensus 952 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1067)
.+. ....+-|..|.|||+.....|++++|+||+|++||+|++|+.||...+.. .+....+..+...
T Consensus 467 ~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s---- 532 (612)
T KOG0603|consen 467 ERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFS---- 532 (612)
T ss_pred chh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccc----
Confidence 654 33456688899999999889999999999999999999999998744431 2223333333222
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...+..+++++.+||+.||.+||+|.++..
T Consensus 533 --~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 --ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred --cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 234446899999999999999999999864
No 389
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-31 Score=302.57 Aligned_cols=252 Identities=27% Similarity=0.431 Sum_probs=206.5
Q ss_pred HhcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEee-----
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH----- 866 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----- 866 (1067)
-+..|++.+.||.|.+|.||+++ .++|+.+|+|+....... .+++..|+.+++.. .|||++.++|+|..
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~----deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE----EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc----cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCC
Confidence 34568888999999999999995 567888999998754332 36677899998887 69999999999853
Q ss_pred CCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 867 AQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 867 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
++.+|+|||||.+|+..|+++... ...+.|+.+..|++.++.|+.+||.+ .++|||||-.|||++.++.||++|||
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFG 168 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFG 168 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeee
Confidence 468999999999999999998766 67799999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccccccCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhc
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEI 1021 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1021 (1067)
++.++..........+|||.|||||++... .|+.++|+||+|++..||--|.+|+..+-+. .++-.+
T Consensus 169 vSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm--------raLF~I 240 (953)
T KOG0587|consen 169 VSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM--------RALFLI 240 (953)
T ss_pred eeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh--------hhhccC
Confidence 999988777777889999999999998643 3677999999999999999999996533221 111111
Q ss_pred cCCCCCCCC-cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1022 LDPRLPIPS-HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1022 ~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
++-+.|. .....-..++.++|..|+.+|-.+||++.++++
T Consensus 241 --pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 241 --PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred --CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1111111 112334457999999999999999999998875
No 390
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.3e-31 Score=303.77 Aligned_cols=258 Identities=21% Similarity=0.333 Sum_probs=195.3
Q ss_pred HhcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCc---
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQH--- 869 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 869 (1067)
..++|+..+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|+.++++++|||++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS-AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch-hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3567999999999999999999764 6889999998654322 2234567789999999999999999998766554
Q ss_pred ---eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 870 ---SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 870 ---~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
.++|+||+ +++|.+++.. ..+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 5689888853 3589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhh-------hhh
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLN-------IAL 1018 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~-------~~~ 1018 (1067)
++...... .....++..|+|||.+.+ ..++.++||||+||++||+++|+.||.............. ...
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 164 LARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred cccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 99865432 234467889999998765 3578899999999999999999999864332111000000 000
Q ss_pred hh--------ccCCCCCCCCcch----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1019 DE--------ILDPRLPIPSHNV----QEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1019 ~~--------~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.. .+........... .....++.+++.+|++.+|++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00 0000000000000 012346889999999999999999999875
No 391
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=7.3e-31 Score=296.57 Aligned_cols=258 Identities=23% Similarity=0.317 Sum_probs=189.9
Q ss_pred CCCccCccccCCceeEEEEEEC-C--CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeC----C
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-S--GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHA----Q 868 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~ 868 (1067)
+|+..+.||+|+||.||+++.. + ++.||+|++...... ....+.+.+|+++++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 4778889999999999999754 4 778999998643222 22346678899999999 599999999875432 4
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIA 948 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a 948 (1067)
..|+++||+. ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred cEEEEEeccc-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 5789999986 588888743 34588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC----ccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccc-------hhhhh
Q 001494 949 KFLKPDSS----NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSS-------LNLNI 1016 (1067)
Q Consensus 949 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~-------~~~~~ 1016 (1067)
+....... ......|++.|+|||.+.+ ..++.++||||+||++|+|++|+.||.......... .....
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 86643221 1233568899999998765 458899999999999999999999986433110000 00000
Q ss_pred hhhhccC-------------CCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1017 ALDEILD-------------PRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1017 ~~~~~~~-------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
....+.. +..... .........+.+++.+|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000 000000 000011235889999999999999999999874
No 392
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=3e-31 Score=300.73 Aligned_cols=257 Identities=23% Similarity=0.318 Sum_probs=189.3
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC-------
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA------- 867 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 867 (1067)
.+|...+.||.|+||.||+|.. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 5788999999999999999965 5789999999865432 2346788999999999999999999776543
Q ss_pred -------CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC-CCC
Q 001494 868 -------QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF-KNE 939 (1067)
Q Consensus 868 -------~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~-~~~ 939 (1067)
...|+||||++ +++.+++.. ..+++..+..++.||+.|++|||+. +|+||||||+||+++. ++.
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 35789999997 588877742 3478999999999999999999999 9999999999999985 457
Q ss_pred eEEeccccceecCCCCC---ccccccccccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh-
Q 001494 940 ARVSDFGIAKFLKPDSS---NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL- 1014 (1067)
Q Consensus 940 ~kl~DfG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~- 1014 (1067)
+|++|||.++....... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.............
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 89999999986543211 1123457889999997654 457889999999999999999999986433211100000
Q ss_pred ------h---h----hhhhccC---CCCCCC-CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1015 ------N---I----ALDEILD---PRLPIP-SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1015 ------~---~----~~~~~~~---~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. . ....... .....+ .........++.+++.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0 0 0000000 000000 0000112245889999999999999999999974
No 393
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.4e-32 Score=268.18 Aligned_cols=261 Identities=23% Similarity=0.360 Sum_probs=191.6
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee--------
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH-------- 866 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 866 (1067)
..|....++|+|.||.||+|+. ++|+.||+|++...... ..+.....+|++++..++|+|++.++..|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK-eGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 4566678899999999999964 46788999887543222 2234556899999999999999999988743
Q ss_pred CCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 867 AQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 867 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
...+|+||++|++ +|.-++... ...++..++.++++++..||.|+|.. .|+|||+||.||||+.+|.+||+|||
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~--~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNR--KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCc--cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 2358999999986 777777543 23478899999999999999999999 99999999999999999999999999
Q ss_pred cceecCCC----CCccccccccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccc-----------
Q 001494 947 IAKFLKPD----SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSS----------- 1010 (1067)
Q Consensus 947 ~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~----------- 1010 (1067)
+++.+... ...++..+.|.+|++||.+.+. .|+++.|||+.|||+.||+||.+-+.........
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 99766432 2345677889999999988765 5899999999999999999998876542211000
Q ss_pred ----chhhhhhhhhcc-CCCCCCC-CcchHHHHH------HHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1011 ----SLNLNIALDEIL-DPRLPIP-SHNVQEKLI------SFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1011 ----~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~------~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.........+-+ -+.++.. .....+... ...+++..++..||++|+++++++.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 000000000000 0000000 000111111 4789999999999999999999875
No 394
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-32 Score=289.32 Aligned_cols=246 Identities=24% Similarity=0.375 Sum_probs=202.8
Q ss_pred hcCCCccCccccCCceeEEEEEECCCc-EEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELASGE-IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 873 (1067)
..+++....||-||||.|-.++.++.+ .+|+|.+++...-+...++.+..|-.+|...+.|.||++|-.|.+....|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 345666778999999999998776444 4899988765555555667788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCC
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
||-|-||.+..+++..+ .++...+..++..+++|++|||++ +||+||+||+|.++|.+|-+|+.|||+|+.+..
T Consensus 499 mEaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred HHhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999996543 477788888999999999999999 999999999999999999999999999999887
Q ss_pred CCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcch
Q 001494 954 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNV 1033 (1067)
Q Consensus 954 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1067)
....+ +++|||.|.|||.+....++.++|.||+|+++||+++|.+||...+++......... ++.+ .+|..
T Consensus 573 g~KTw-TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG-id~i-----~~Pr~-- 643 (732)
T KOG0614|consen 573 GRKTW-TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG-IDKI-----EFPRR-- 643 (732)
T ss_pred CCcee-eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh-hhhh-----hcccc--
Confidence 65555 479999999999999999999999999999999999999999987765332221111 1111 12221
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCC
Q 001494 1034 QEKLISFVEVAISCLDESPESRPT 1057 (1067)
Q Consensus 1034 ~~~~~~l~~li~~cl~~dP~~Rpt 1057 (1067)
......+++++....+|.+|--
T Consensus 644 --I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 644 --ITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred --cchhHHHHHHHHHhcCcHhhhc
Confidence 2234678888999999999975
No 395
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.8e-30 Score=278.23 Aligned_cols=219 Identities=21% Similarity=0.207 Sum_probs=174.8
Q ss_pred CCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCHHHH
Q 001494 807 GGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSLAMI 885 (1067)
Q Consensus 807 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~ 885 (1067)
|.+|.||+++. .+++.||+|++.... .+..|...+....|||++++++++.+.+..++||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 89999999865 578999999986431 223445555566799999999999999999999999999999998
Q ss_pred hcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccccccccc
Q 001494 886 LSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTELAGTY 965 (1067)
Q Consensus 886 l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~ 965 (1067)
+... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||.+...... .....++.
T Consensus 76 l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~ 146 (237)
T cd05576 76 ISKF---LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVEN 146 (237)
T ss_pred HHHh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCc
Confidence 8543 3489999999999999999999999 9999999999999999999999999988665432 12334567
Q ss_pred cccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHH
Q 001494 966 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAI 1045 (1067)
Q Consensus 966 ~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 1045 (1067)
.|+|||...+..++.++||||+|+++|||++|+.|++...... ... .....+.. ....+.+++.
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------~~~--~~~~~~~~----~~~~~~~li~ 210 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------NTH--TTLNIPEW----VSEEARSLLQ 210 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------ccc--cccCCccc----CCHHHHHHHH
Confidence 8999999988889999999999999999999998865322100 000 11112222 1234889999
Q ss_pred hccCCCCCCCCCH
Q 001494 1046 SCLDESPESRPTM 1058 (1067)
Q Consensus 1046 ~cl~~dP~~Rpt~ 1058 (1067)
+|++.||++||++
T Consensus 211 ~~l~~dp~~R~~~ 223 (237)
T cd05576 211 QLLQFNPTERLGA 223 (237)
T ss_pred HHccCCHHHhcCC
Confidence 9999999999997
No 396
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.5e-30 Score=308.69 Aligned_cols=259 Identities=20% Similarity=0.226 Sum_probs=168.4
Q ss_pred HhcCCCccCccccCCceeEEEEEEC-C----CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEE-----
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA-S----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF----- 863 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~----- 863 (1067)
..++|...++||+|+||.||+|+.. + +..||+|++...... +....| .+....+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 4578999999999999999999765 4 689999997643211 111111 1111122222222211
Q ss_pred -EeeCCceeEEEEeccCCCHHHHhcccCcc-----------------CCCChHHHHHHHHHHHHHHHHHHhCCCCCeeec
Q 001494 864 -CSHAQHSFIVYEYLEMGSLAMILSNDAAA-----------------EDLEWTQRMSVIKGIADALSYLHNDCFPPIVHR 925 (1067)
Q Consensus 864 -~~~~~~~~lv~E~~~~g~L~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHr 925 (1067)
...+...++||||+++++|.+++...... .......+..++.|++.||+|||++ +|+||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHR 279 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHR 279 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 24566899999999999999988643210 0112334567999999999999999 99999
Q ss_pred CCCCCceeeCC-CCCeEEeccccceecCCCC-CccccccccccccCccccccCC----------------------CCcc
Q 001494 926 DISSKNVLLDF-KNEARVSDFGIAKFLKPDS-SNWTELAGTYGYVAPELAYTMK----------------------VTEK 981 (1067)
Q Consensus 926 Dlk~~Nill~~-~~~~kl~DfG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~----------------------~~~~ 981 (1067)
||||+|||++. ++.+||+|||+|+.+.... .......+++.|||||.+.... ++.+
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999999986 5789999999998654322 2234567899999999653221 3346
Q ss_pred chhHHHHHHHHHHHhCCCCCCccccc-----cccchhhhhhhhhccCCCCCCC----CcchHHHHHHHHHHHHhccCCCC
Q 001494 982 CDVYSFGVLALEVIKGKHPGDFISLI-----SSSSLNLNIALDEILDPRLPIP----SHNVQEKLISFVEVAISCLDESP 1052 (1067)
Q Consensus 982 ~DvwslGvil~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP 1052 (1067)
+||||+||++|||+++..|++..... ....... ........+..... .+..........+++.+|++.||
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDL-VAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcH-HHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 79999999999999988775432110 0000000 01111111110000 00000011235589999999999
Q ss_pred CCCCCHHHHHH
Q 001494 1053 ESRPTMQKVSQ 1063 (1067)
Q Consensus 1053 ~~Rpt~~evl~ 1063 (1067)
.+|||+.|+++
T Consensus 439 ~kR~ta~e~L~ 449 (566)
T PLN03225 439 RQRISAKAALA 449 (566)
T ss_pred ccCCCHHHHhC
Confidence 99999999986
No 397
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=276.00 Aligned_cols=269 Identities=20% Similarity=0.281 Sum_probs=200.9
Q ss_pred cCcccHHHHHHHhcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-C-C----
Q 001494 783 EGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-H-R---- 855 (1067)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-~---- 855 (1067)
+|-+++..-...+.+|.+.+.+|+|.||.|-++. ..++..||||+++.. ....+..+-|+++++++. + |
T Consensus 76 dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~ 151 (415)
T KOG0671|consen 76 DGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKF 151 (415)
T ss_pred CceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCce
Confidence 3434444434447889999999999999999974 445899999998742 233456678999999993 2 2
Q ss_pred eeeeeeEEEeeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeC
Q 001494 856 NIVKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLD 935 (1067)
Q Consensus 856 niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~ 935 (1067)
-+|.+.+||.-.++.++|+|.+ |.++.+++.... -.+++..++..|+.|++++++|||+. +++|.|+||+||++.
T Consensus 152 rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfv 226 (415)
T KOG0671|consen 152 RCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFV 226 (415)
T ss_pred EEEeeehhhhccCceEEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEe
Confidence 4788889999999999999988 458999996543 34588899999999999999999999 999999999999983
Q ss_pred C--------------------CCCeEEeccccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHH
Q 001494 936 F--------------------KNEARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 995 (1067)
Q Consensus 936 ~--------------------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell 995 (1067)
. +..+||+|||.|+.-... .+..+.|..|+|||++.+-..+.++||||+||||+|+.
T Consensus 227 ss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely 303 (415)
T KOG0671|consen 227 SSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY 303 (415)
T ss_pred ccceEEEeccCCccceeccCCCcceEEEecCCcceeccC---cceeeeccccCCchheeccCcCCccCceeeeeEEEEee
Confidence 1 234899999999875433 25678899999999999999999999999999999999
Q ss_pred hCCCCCCcccccccc-------chhhhhhhhhc------cCCCCCC-----------------C----CcchHHHHHHHH
Q 001494 996 KGKHPGDFISLISSS-------SLNLNIALDEI------LDPRLPI-----------------P----SHNVQEKLISFV 1041 (1067)
Q Consensus 996 tg~~p~~~~~~~~~~-------~~~~~~~~~~~------~~~~~~~-----------------~----~~~~~~~~~~l~ 1041 (1067)
||..-|...+..+.. +......+... ..+++.. | .....++..++.
T Consensus 304 tG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~Lf 383 (415)
T KOG0671|consen 304 TGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLF 383 (415)
T ss_pred ccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHH
Confidence 999887654422100 00000000000 0000000 0 001123445799
Q ss_pred HHHHhccCCCCCCCCCHHHHHH
Q 001494 1042 EVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1042 ~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+++++|+..||.+|+|+.|+++
T Consensus 384 DLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 384 DLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHccCccccccHHHHhc
Confidence 9999999999999999999975
No 398
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=5.2e-30 Score=290.09 Aligned_cols=243 Identities=27% Similarity=0.412 Sum_probs=185.9
Q ss_pred CCccCccccCCcee-EEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEEEE
Q 001494 798 FDDEHCIGKGGQGS-VYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
|...+.+|.|+.|+ ||+|... |+.||||++-.. ...-..+|+..++.- +|||||++++.-.+....||..|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 44557789998876 5788887 889999998532 234456899999888 59999999999999999999999
Q ss_pred eccCCCHHHHhcccCc-cCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC---CC--CeEEeccccce
Q 001494 876 YLEMGSLAMILSNDAA-AEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF---KN--EARVSDFGIAK 949 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~---~~--~~kl~DfG~a~ 949 (1067)
.|.. +|.+++..... .........+.+..|+++|+++||+. +|||||+||+||||+. ++ .++|+|||+++
T Consensus 584 LC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 9964 99999965311 11112244577889999999999998 9999999999999976 34 58999999999
Q ss_pred ecCCCCCc---cccccccccccCccccccCCCCccchhHHHHHHHHHHHhC-CCCCCccccccccchhhhhhhhhccCCC
Q 001494 950 FLKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-KHPGDFISLISSSSLNLNIALDEILDPR 1025 (1067)
Q Consensus 950 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1067)
.+..+... .....||.+|+|||++.....+.++||||+||++|+.++| .+||......+. .++...
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~----------NIl~~~ 729 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA----------NILTGN 729 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh----------hhhcCc
Confidence 98766443 3456789999999999999889999999999999999986 899863322111 111111
Q ss_pred CCCCC-cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1026 LPIPS-HNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1026 ~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...-. ....+. +..++|.+|++++|..||+|.+|+.
T Consensus 730 ~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 730 YTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred cceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 11100 000111 4789999999999999999999974
No 399
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=5.3e-29 Score=268.06 Aligned_cols=239 Identities=28% Similarity=0.446 Sum_probs=192.1
Q ss_pred CceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCHHHHh
Q 001494 808 GQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSLAMIL 886 (1067)
Q Consensus 808 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l 886 (1067)
+||.||+|... +|+.+|+|++........ .+.+.+|++.+++++|+|++++++++......+++|||+++++|..++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 58999999776 589999999875433221 578899999999999999999999999999999999999999999998
Q ss_pred cccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCcccccccccc
Q 001494 887 SNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTELAGTYG 966 (1067)
Q Consensus 887 ~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~ 966 (1067)
.... .+++..+..++.+++.+++|||+. +++|+||+|+||+++.++.++++|||.+....... ......++..
T Consensus 79 ~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~ 151 (244)
T smart00220 79 KKRG---RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPE 151 (244)
T ss_pred Hhcc---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcC
Confidence 5433 278899999999999999999999 99999999999999999999999999998765432 3344567889
Q ss_pred ccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHh
Q 001494 967 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAIS 1046 (1067)
Q Consensus 967 y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 1046 (1067)
|+|||...+..++.++||||+|+++|++++|..||+.... .................. ......++.+++.+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~ 223 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-------LLELFKKIGKPKPPFPPP-EWKISPEAKDLIRK 223 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------HHHHHHHHhccCCCCccc-cccCCHHHHHHHHH
Confidence 9999999888889999999999999999999999864211 111111111111111111 00022358899999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 001494 1047 CLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1047 cl~~dP~~Rpt~~evl~ 1063 (1067)
|+..+|++||++.++++
T Consensus 224 ~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 224 LLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HccCCchhccCHHHHhh
Confidence 99999999999999986
No 400
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=7.2e-29 Score=286.01 Aligned_cols=264 Identities=16% Similarity=0.203 Sum_probs=180.7
Q ss_pred hcCCCccCccccCCceeEEEEEE-----------------CCCcEEEEEEeCCCCCCChh-----------HHHHHHHHH
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVEL-----------------ASGEIIAVKKFHSPLPGEMT-----------FQQEFLNEV 846 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~-----------~~~~~~~e~ 846 (1067)
.++|++.++||+|+||+||+|.. ..++.||||++......... ..+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 46899999999999999999853 24567999998643221100 012234567
Q ss_pred HHHhcCCCCee-----eeeeEEEee--------CCceeEEEEeccCCCHHHHhcccCc---------------------c
Q 001494 847 KALTEIRHRNI-----VKFYGFCSH--------AQHSFIVYEYLEMGSLAMILSNDAA---------------------A 892 (1067)
Q Consensus 847 ~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~E~~~~g~L~~~l~~~~~---------------------~ 892 (1067)
.++.+++|.++ ++++++|.. ++..|+||||+++++|.++++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777766554 677777753 3578999999999999998863210 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCc-cccccccccccCcc
Q 001494 893 EDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSN-WTELAGTYGYVAPE 971 (1067)
Q Consensus 893 ~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~gt~~y~aPE 971 (1067)
..+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||+++........ .....+|+.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 2356778899999999999999999 9999999999999999999999999999765432211 11223478999999
Q ss_pred ccccCCC----------------------CccchhHHHHHHHHHHHhCCC-CCCccccccccchh---hhhhhhhccCCC
Q 001494 972 LAYTMKV----------------------TEKCDVYSFGVLALEVIKGKH-PGDFISLISSSSLN---LNIALDEILDPR 1025 (1067)
Q Consensus 972 ~~~~~~~----------------------~~~~DvwslGvil~elltg~~-p~~~~~~~~~~~~~---~~~~~~~~~~~~ 1025 (1067)
.+..... ..+.||||+||++|||++|.. |+............ .......+....
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 8754321 124799999999999999986 66532221111000 000111111112
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCC---CCCCCHHHHHH
Q 001494 1026 LPIPSHNVQEKLISFVEVAISCLDESP---ESRPTMQKVSQ 1063 (1067)
Q Consensus 1026 ~~~~~~~~~~~~~~l~~li~~cl~~dP---~~Rpt~~evl~ 1063 (1067)
...+ ..........+++.+++..+| .+|+|++|+++
T Consensus 461 ~~~~--~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 461 YDFS--LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred CCcc--cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 1111 112233457899999999765 68999999986
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.6e-31 Score=257.85 Aligned_cols=259 Identities=24% Similarity=0.353 Sum_probs=194.3
Q ss_pred CCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCC-----cee
Q 001494 798 FDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQ-----HSF 871 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 871 (1067)
.+..+.||.|+||.||.++ -++|+.||.|++..... .....+.+.+|++++..++|.||...++...-.. +.|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq-~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQ-NLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHH-HHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 4556889999999999985 56899999999864322 2334577889999999999999999988765443 568
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+|+|.|. .+|..++- ....++...+.-+..||++|+.|||+. +|.||||||.|.|++.+-..||||||+|+..
T Consensus 134 V~TELmQ-SDLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 134 VLTELMQ-SDLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHH-hhhhheec---cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccccc
Confidence 8999885 57777763 344588888899999999999999999 9999999999999999999999999999976
Q ss_pred CCC-CCccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCccccccccch---------------hh
Q 001494 952 KPD-SSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL---------------NL 1014 (1067)
Q Consensus 952 ~~~-~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~---------------~~ 1014 (1067)
..+ ...++..+-|..|+|||.+.+.+ |+.+.||||.|||+.|++.++.-|....+.+.... .-
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 544 34566777899999999988765 89999999999999999998887754433221100 00
Q ss_pred hhhhhhccCCCCCCCCc-------chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1015 NIALDEILDPRLPIPSH-------NVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
+.+...+++.....|.. .....-.+...+...++..||++|.+..+.+..
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 11112222222221110 001122346778889999999999998887653
No 402
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.8e-29 Score=274.84 Aligned_cols=201 Identities=24% Similarity=0.340 Sum_probs=168.9
Q ss_pred CCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
-|...+.||-|+||+|.+++ ..+...||.|.+.+...-.......+..|-.|++..+.+-||+++-.|.+++.+|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 36677889999999999985 45567799998875433333445567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec----
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL---- 951 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~---- 951 (1067)
|++||++-.++-+ .+.+.+..+..++.++..|+++.|.. |+|||||||+|||||.+|++|++|||+++-+
T Consensus 710 YIPGGDmMSLLIr---mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIR---MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred ccCCccHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecc
Confidence 9999999887743 34477788888899999999999999 9999999999999999999999999998532
Q ss_pred -----CCCCCc---------------------------------cccccccccccCccccccCCCCccchhHHHHHHHHH
Q 001494 952 -----KPDSSN---------------------------------WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALE 993 (1067)
Q Consensus 952 -----~~~~~~---------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~e 993 (1067)
...+.. ....+||+.|+|||++....|+.-.|.||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 111000 013479999999999999999999999999999999
Q ss_pred HHhCCCCCCc
Q 001494 994 VIKGKHPGDF 1003 (1067)
Q Consensus 994 lltg~~p~~~ 1003 (1067)
|+.|+.||-.
T Consensus 864 m~~g~~pf~~ 873 (1034)
T KOG0608|consen 864 MLVGQPPFLA 873 (1034)
T ss_pred HhhCCCCccC
Confidence 9999999853
No 403
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.7e-28 Score=260.02 Aligned_cols=131 Identities=24% Similarity=0.448 Sum_probs=109.9
Q ss_pred cCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-----C---CeeeeeeEEEee
Q 001494 796 NDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-----H---RNIVKFYGFCSH 866 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~ 866 (1067)
.+|.+.++||.|-|++||++. ....+.||+|+.+.. ..+.+..+.||+++++++ | .+||+++++|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 678899999999999999995 567889999999753 345567789999999884 2 489999999975
Q ss_pred C----CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceee
Q 001494 867 A----QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLL 934 (1067)
Q Consensus 867 ~----~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill 934 (1067)
. .+++||+|++ |.+|..++.....+ .++...+.+|++||+.||.|||++| ||||.||||+|||+
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~Yr-Glpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYR-GLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 4 4899999998 45666666544333 3888999999999999999999998 99999999999998
No 404
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=4.6e-29 Score=240.41 Aligned_cols=254 Identities=21% Similarity=0.317 Sum_probs=191.6
Q ss_pred HhcCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCC--c
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQ--H 869 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 869 (1067)
..++|++.+++|+|-+++||.|. ..+.+.++||+++.. ..+.+.+|++++..++ ||||++++++..+.. .
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 34678999999999999999985 567888999998743 2467899999999996 999999999987764 6
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC-CeEEeccccc
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN-EARVSDFGIA 948 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~-~~kl~DfG~a 948 (1067)
+.+|+||+.+.+..... ..++..++...+.++++||.|+|+. ||+|||+||.||+||... ..+++|+|+|
T Consensus 110 paLiFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred chhHhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchH
Confidence 78999999998877665 2377788889999999999999999 999999999999999765 5999999999
Q ss_pred eecCCCCCccccccccccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCcccccccc-----------chh---
Q 001494 949 KFLKPDSSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPGDFISLISSS-----------SLN--- 1013 (1067)
Q Consensus 949 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~-----------~~~--- 1013 (1067)
.++.+. ..+...+.+..|.-||.+...+ |+..-|+|||||++.+|+..+.||-......+. ...
T Consensus 181 EFYHp~-~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 181 EFYHPG-KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred hhcCCC-ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 988765 3344456667789999877654 899999999999999999999996321110000 000
Q ss_pred ------hhhhhhhccCCCCCCC------CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1014 ------LNIALDEILDPRLPIP------SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1014 ------~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
.......++......+ ++...-...++.+++.+.+..|-++|+||+|.++
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 0000111111111111 1111111245889999999999999999999875
No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=5.2e-29 Score=269.73 Aligned_cols=212 Identities=23% Similarity=0.338 Sum_probs=175.1
Q ss_pred cCcccHHHHHHHhcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHH-----HHHHHHHHHhcCC---
Q 001494 783 EGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQ-----EFLNEVKALTEIR--- 853 (1067)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~-----~~~~e~~~l~~l~--- 853 (1067)
++....+.......+|...+.+|.|+||.|+.|.++ +...|+||.+.+...-...+.+ .+-.||++|+.++
T Consensus 548 e~~~~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~s 627 (772)
T KOG1152|consen 548 EGNIGCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHS 627 (772)
T ss_pred cccccceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcC
Confidence 333333433445567999999999999999998655 4667889988754322212221 2457999999997
Q ss_pred CCeeeeeeEEEeeCCceeEEEEecc-CCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCce
Q 001494 854 HRNIVKFYGFCSHAQHSFIVYEYLE-MGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNV 932 (1067)
Q Consensus 854 h~niv~l~~~~~~~~~~~lv~E~~~-~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Ni 932 (1067)
|+||++++++|++++.+|++||-.. +-+|.+++.. ...+++..+..|++|++.|+++||+. ||||||||-+||
T Consensus 628 H~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~---kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenv 701 (772)
T KOG1152|consen 628 HENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEF---KPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENV 701 (772)
T ss_pred ccchhhhhheeecCCeeEEEecCCCCCcchhhhhhc---cCccchHHHHHHHHHHHhcccccccc---CceecccccccE
Confidence 9999999999999999999999874 5588899843 34589999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeccccceecCCCCCccccccccccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCC
Q 001494 933 LLDFKNEARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPGD 1002 (1067)
Q Consensus 933 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~ 1002 (1067)
.++.+|-+|++|||.|.+... .....++||..|.|||++.+.+| +..-|||++|+++|-++....||-
T Consensus 702 ivd~~g~~klidfgsaa~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 702 IVDSNGFVKLIDFGSAAYTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEecCCeEEEeeccchhhhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999999999999977653 34467899999999999999887 667999999999999999888863
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=7.8e-29 Score=272.99 Aligned_cols=250 Identities=28% Similarity=0.417 Sum_probs=201.4
Q ss_pred cCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
++|+...++|.|.+|.|||++ ..+++..|||+++.....+ .+-..+|+.+++..+|||||.++|.+-..+..|+.|
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd---~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD---FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc---ccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 578888999999999999996 4689999999998654333 345668999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+.+|+|.+..+- .+++++.++..+++...+|++|||+. |-+|||||-.||++++.|.+|++|||.+..+...
T Consensus 92 EycgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred EecCCCcccceeee---cccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhh
Confidence 99999999998854 34589999999999999999999999 8899999999999999999999999999888776
Q ss_pred CCccccccccccccCcccc---ccCCCCccchhHHHHHHHHHHHhCCCC-CCccccccccchhhhhhhhh-ccCCCCCCC
Q 001494 955 SSNWTELAGTYGYVAPELA---YTMKVTEKCDVYSFGVLALEVIKGKHP-GDFISLISSSSLNLNIALDE-ILDPRLPIP 1029 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslGvil~elltg~~p-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 1029 (1067)
-.....+.||+.|||||+. ..+.|...+|||+.|+...|+---+.| |+.... ......... ...+.+..+
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm-----r~l~LmTkS~~qpp~lkDk 240 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM-----RALFLMTKSGFQPPTLKDK 240 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH-----HHHHHhhccCCCCCcccCC
Confidence 6677789999999999964 355689999999999999999887777 332111 000111111 111222211
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
..+. ..+-+|++.|+.++|++||++..+++
T Consensus 241 -~kws---~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 241 -TKWS---EFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred -ccch---HHHHHHHHHHhcCCCccCCChhhhee
Confidence 1222 24778999999999999999988764
No 407
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=5.3e-28 Score=245.58 Aligned_cols=256 Identities=22% Similarity=0.331 Sum_probs=192.9
Q ss_pred cCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeC------C
Q 001494 796 NDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHA------Q 868 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 868 (1067)
.+|...+.+|.|+- .|..| ..-.+++||+|++..+... ....+...+|...+..+.|+|+++++.++.-. .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 46777888999988 44444 4456889999998877444 33346677899999999999999999998543 3
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIA 948 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a 948 (1067)
..|+|||||.. ++...+. -.++-..+..|..|++.|+.|||+. ||+|||+||+||++..+..+||.|||+|
T Consensus 95 e~y~v~e~m~~-nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL-----MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 67999999964 7777764 2367788899999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccch----------------
Q 001494 949 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSL---------------- 1012 (1067)
Q Consensus 949 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~---------------- 1012 (1067)
+..... ..++..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|.+.........
T Consensus 166 r~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 166 RTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred cccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 876544 456778889999999999998899999999999999999999987654332111000
Q ss_pred -----hhh--------hhhhhcc-CCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1013 -----NLN--------IALDEIL-DPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1013 -----~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
... ..+.+.+ |..++...+...-....+.+++.+||..+|++|.+++++++
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000 0001111 11111111111112234789999999999999999999985
No 408
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.9e-26 Score=242.14 Aligned_cols=212 Identities=33% Similarity=0.603 Sum_probs=184.4
Q ss_pred cccCCceeEEEEEECC-CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCH
Q 001494 804 IGKGGQGSVYKVELAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSL 882 (1067)
Q Consensus 804 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 882 (1067)
||+|++|.||++.... ++.+++|++....... ..+.+.+|++.++.++|++++++++++......+++|||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 6899999999997754 8999999987543221 346789999999999999999999999999999999999999999
Q ss_pred HHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC-CCCeEEeccccceecCCCCCccccc
Q 001494 883 AMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF-KNEARVSDFGIAKFLKPDSSNWTEL 961 (1067)
Q Consensus 883 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~-~~~~kl~DfG~a~~~~~~~~~~~~~ 961 (1067)
.+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+.............
T Consensus 79 ~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (215)
T cd00180 79 KDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI 153 (215)
T ss_pred HHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence 99985432 3578999999999999999999999 9999999999999999 8999999999998765443223445
Q ss_pred cccccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHH
Q 001494 962 AGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISF 1040 (1067)
Q Consensus 962 ~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1040 (1067)
.+...|++||..... .++.++|+|++|++++++ .++
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~~ 190 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PEL 190 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HHH
Confidence 678889999998877 788999999999999999 248
Q ss_pred HHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1041 VEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1041 ~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
.+++..|++.+|++||++.++++.+
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhCC
Confidence 8999999999999999999998753
No 409
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=9.1e-27 Score=249.11 Aligned_cols=211 Identities=22% Similarity=0.259 Sum_probs=173.7
Q ss_pred cCcccHHHHHHHhcCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC------CC
Q 001494 783 EGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR------HR 855 (1067)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~ 855 (1067)
+|.+.+.--.....+|.+..-.|+|-|++|..|.. .-|..||||++... ....+.=+.|++++++|. --
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN----E~M~KtGl~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN----EVMHKTGLKELEILKKLNDADPEDKF 494 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc----hHHhhhhhHHHHHHHHhhccCchhhh
Confidence 44444333334457899999999999999999954 45789999999742 223455578999999995 35
Q ss_pred eeeeeeEEEeeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeC
Q 001494 856 NIVKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLD 935 (1067)
Q Consensus 856 niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~ 935 (1067)
|+++++..|....++|+|||-+. -+|.++++..+..-.+....+..++.|+.-||..|... +|+|.||||.|||++
T Consensus 495 Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVN 570 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVN 570 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEec
Confidence 89999999999999999999885 58999998877777788999999999999999999988 999999999999999
Q ss_pred CCC-CeEEeccccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001494 936 FKN-EARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDF 1003 (1067)
Q Consensus 936 ~~~-~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~ 1003 (1067)
+.. .+||||||.|....... .+....+.-|.|||.+.|.+|++..|+||.||+|||+.||+.-|.+
T Consensus 571 E~k~iLKLCDfGSA~~~~ene--itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 571 ESKNILKLCDFGSASFASENE--ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred cCcceeeeccCcccccccccc--ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 875 48999999997765432 2233344569999999999999999999999999999999977643
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=2.2e-26 Score=243.32 Aligned_cols=197 Identities=27% Similarity=0.412 Sum_probs=164.4
Q ss_pred HHHHhcCCCccCccccCCceeEEEEEEC----CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEe
Q 001494 791 IIRATNDFDDEHCIGKGGQGSVYKVELA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCS 865 (1067)
Q Consensus 791 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 865 (1067)
+....+.|..+++||+|.|++||++... ..+.||+|.+..... ...+..|++++..+ .+.||+++.+++.
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-----p~ri~~El~~L~~~gG~~ni~~~~~~~r 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-----PSRILNELEMLYRLGGSDNIIKLNGCFR 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-----chHHHHHHHHHHHhccchhhhcchhhhc
Confidence 3345567899999999999999998543 467899999875432 35688999999999 5999999999999
Q ss_pred eCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC-CCCeEEec
Q 001494 866 HAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF-KNEARVSD 944 (1067)
Q Consensus 866 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~-~~~~kl~D 944 (1067)
..+...+|+||+++....++... ++..++..+++.+.+||+++|.. |||||||||.|++.+. .+.-.|+|
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvD 176 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVD 176 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEe
Confidence 99999999999999999988843 66788899999999999999999 9999999999999974 47789999
Q ss_pred cccceecCC----------------C--CC--------------c------------cccccccccccCccccccC-CCC
Q 001494 945 FGIAKFLKP----------------D--SS--------------N------------WTELAGTYGYVAPELAYTM-KVT 979 (1067)
Q Consensus 945 fG~a~~~~~----------------~--~~--------------~------------~~~~~gt~~y~aPE~~~~~-~~~ 979 (1067)
||+|..... . +. . ....+||++|+|||++... ..+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 999972110 0 00 0 0124699999999988765 478
Q ss_pred ccchhHHHHHHHHHHHhCCCCC
Q 001494 980 EKCDVYSFGVLALEVIKGKHPG 1001 (1067)
Q Consensus 980 ~~~DvwslGvil~elltg~~p~ 1001 (1067)
+++||||.|||+..+++++.||
T Consensus 257 taiDiws~GVI~Lslls~~~PF 278 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPF 278 (418)
T ss_pred Cccceeeccceeehhhcccccc
Confidence 9999999999999999999997
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=4.6e-25 Score=234.44 Aligned_cols=199 Identities=32% Similarity=0.533 Sum_probs=171.2
Q ss_pred CCccCccccCCceeEEEEEECC-CcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVELAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|+..+.||+|++|.||++.... ++.+|+|.+...... ...+.+..|++.+++++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 5667889999999999997764 899999999754332 2457888999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCC-
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS- 955 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~- 955 (1067)
+++++|.+++..... .+++..+..++.+++.++++||+. +++|+|++|.||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 79 CEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred cCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 999999999864322 178899999999999999999999 99999999999999999999999999998776442
Q ss_pred CccccccccccccCcccc-ccCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001494 956 SNWTELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGKHPGDF 1003 (1067)
Q Consensus 956 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslGvil~elltg~~p~~~ 1003 (1067)
.......++..|++||.. ....++.++|||+||++++||++|+.||+.
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122345677889999988 666778899999999999999999999863
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-27 Score=249.04 Aligned_cols=429 Identities=22% Similarity=0.270 Sum_probs=242.6
Q ss_pred ccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEec-ccccccCCCccc
Q 001494 208 SIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYN-NSLSGLIPSEIG 286 (1067)
Q Consensus 208 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~ 286 (1067)
.+|..+. ..-.+++|..|+|+.+.|.+|+.+++|+.|||++|.|+.+-|++|.++.+|..|-+.+ |+|+.+.-..|+
T Consensus 60 eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~ 137 (498)
T KOG4237|consen 60 EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFG 137 (498)
T ss_pred cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhh
Confidence 4554443 2455667777777766666677777777777777777766666777666666655544 666666555666
Q ss_pred cCCcccEEEeccccccCCccccccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeE
Q 001494 287 NLKFLSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVL 366 (1067)
Q Consensus 287 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 366 (1067)
++..|+.|.+.-|++.-...+.|..++++..|.+.+|.+..+....|..+..++.+.+..|.+. ...+++.+..
T Consensus 138 gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~- 211 (498)
T KOG4237|consen 138 GLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLAD- 211 (498)
T ss_pred hHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc-----cccccchhhh-
Confidence 6666666666666666666666666666666666666666555556666666666666665531 0111211111
Q ss_pred EccCCcCccccCcccCCCCCCCEEEccCCcccccCCCccccc-cCCcE-EEcccCcCcccCchhhhCcCCCcEEeCCCCc
Q 001494 367 FIYNNSLSGSIPCEIGNLKSLSYLNLAFNKLTSSIPISLSNL-TNLSV-LSFYKNSLSGAIPKEYRNLVKLTKLFLGDNQ 444 (1067)
Q Consensus 367 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 444 (1067)
+....|..++......-..+.++++..+.+..|... .++.. +....+....-....|+.+++|++|+|++|+
T Consensus 212 ------~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~ 285 (498)
T KOG4237|consen 212 ------DLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNK 285 (498)
T ss_pred ------HHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCc
Confidence 011223334444444555555555554444433222 12211 1112222222233467777788888888887
Q ss_pred ccCCCC-CCCCCCcccEEeccCcccccccccccccCCceeEEEcccccccCCCCCCCCCCCCcceEeccCCccCCCCCCc
Q 001494 445 FQGPIP-NLKNLTSLVRVHLDRNYLTSNISESFYIYPNLTFIDLSYNNLYGEISSDWGRCPKLGALDFSKNNITGNIPPK 523 (1067)
Q Consensus 445 l~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 523 (1067)
++.+.+ .|.+..++++|+|.+|+|..+....|.++..|+.|+|.+|+|+...|.+|.....|..|+|-.|.+. ..
T Consensus 286 i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~-Cn--- 361 (498)
T KOG4237|consen 286 ITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN-CN--- 361 (498)
T ss_pred cchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc-Cc---
Confidence 777544 4777777888888888888888888888888888888888888877888888888888887777653 00
Q ss_pred ccCCCCCcEE--EcCCCcccCcCcccccCCCccceeecccccccC---CccccccccccccEEEccCCCCCCCccccccc
Q 001494 524 IGYSSQLEVL--DLSSNHVVGDIPAELGKLSFLIKLILAQNQLSG---QLSPKLGLLVQLEHLDLSSNNLSNAIPESLGN 598 (1067)
Q Consensus 524 ~~~~~~L~~L--~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 598 (1067)
.+|..| .|..+.-.|.. ..++...++.+.++++.+.. ..++..+. .-++..|. .
T Consensus 362 ----C~l~wl~~Wlr~~~~~~~~--~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~------------~~s~~cP~---~ 420 (498)
T KOG4237|consen 362 ----CRLAWLGEWLRKKSVVGNP--RCQSPGFVRQIPISDVAFGDFRCGGPEELGC------------LTSSPCPP---P 420 (498)
T ss_pred ----cchHHHHHHHhhCCCCCCC--CCCCCchhccccchhccccccccCCccccCC------------CCCCCCCC---C
Confidence 111111 11222211111 12233345555555444331 11111100 00111111 1
Q ss_pred ccccc-eecccCcccccccchhhhhccccceeccccccCCCcchhhhhcccccccccccccccccccccccccCccccEE
Q 001494 599 LVKLH-YLNLSNNQFSWEIPIKLEELIHLSELDLSYNFLGRAIPSQICIMQSLEKLNLSHNSLSGVIPRCFEEMHALQCI 677 (1067)
Q Consensus 599 l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~l 677 (1067)
++-+. ..-.|++.++ ..|..+. ..-.+|++.+|.++....+ .+.+| .+|+|+|+|+......|.++++|.+|
T Consensus 421 c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~~vp~~---~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tl 493 (498)
T KOG4237|consen 421 CTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAITSVPDE---LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTL 493 (498)
T ss_pred cchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhcccCHH---HHhhh-hcccccCceehhhcccccchhhhhee
Confidence 12222 2334444443 3333332 2345677777777544444 45666 78888888888888888899999999
Q ss_pred EcccC
Q 001494 678 DISYN 682 (1067)
Q Consensus 678 ~l~~N 682 (1067)
-+|||
T Consensus 494 ilsyn 498 (498)
T KOG4237|consen 494 ILSYN 498 (498)
T ss_pred EEecC
Confidence 99887
No 413
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.5e-26 Score=225.44 Aligned_cols=249 Identities=20% Similarity=0.297 Sum_probs=179.5
Q ss_pred hcCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeE-EEeeCCcee
Q 001494 795 TNDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYG-FCSHAQHSF 871 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~-~~~~~~~~~ 871 (1067)
.+.|.+.+.+|+|.||.+-.++++ +.+.+++|.+..+.. ..++|.+|..---.+ .|.||+..++ .|+..+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 456888999999999999999765 567899999876543 357888887765555 5999999886 467778888
Q ss_pred EEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeC-CC-CCeEEeccccce
Q 001494 872 IVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLD-FK-NEARVSDFGIAK 949 (1067)
Q Consensus 872 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~-~~-~~~kl~DfG~a~ 949 (1067)
+++||++.|+|..-+.. ..+-+....+++.|++.|+.|||++ ++||||||.+||||- .+ .++|+||||..+
T Consensus 99 F~qE~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred EeeccCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccc
Confidence 99999999999887743 3366778889999999999999999 999999999999993 33 469999999998
Q ss_pred ecCCCCCccccccccccccCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC
Q 001494 950 FLKPDSSNWTELAGTYGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP 1024 (1067)
Q Consensus 950 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1024 (1067)
..+.... ..--+..|.|||..... ...+.+|||.||+++|.++||+.||+... ..+..+...........+
T Consensus 172 k~g~tV~---~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~-~~d~~Y~~~~~w~~rk~~ 247 (378)
T KOG1345|consen 172 KVGTTVK---YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS-IMDKPYWEWEQWLKRKNP 247 (378)
T ss_pred ccCceeh---hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh-ccCchHHHHHHHhcccCc
Confidence 7553322 22235569999965432 24678999999999999999999987322 222222222222222222
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 001494 1025 RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKV 1061 (1067)
Q Consensus 1025 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ev 1061 (1067)
+.+ .........+.++.++-+..+|++|=...++
T Consensus 248 ~~P---~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 248 ALP---KKFNPFSEKALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred cCc---hhhcccCHHHHHHHHHhcCCcccccchhHHH
Confidence 221 1112222346677778889999998444443
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=8e-28 Score=250.06 Aligned_cols=405 Identities=24% Similarity=0.277 Sum_probs=245.5
Q ss_pred CcceEeccCCccccCCCCcccccCccceeecCCCcccCCCCcccccccccceecccc-cccccCCCCccccccccccccc
Q 001494 74 HLAYLDLWSNQLFGNIPPQIGNISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFK-NQLSGSIPLEVGGLSSLNNLAL 152 (1067)
Q Consensus 74 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L 152 (1067)
....++|..|+|+...|.+|+.+.+|+.||||+|+|+.+-|..|.+|.+|..|-+-+ |+|+......|++|.+|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 467788888888877778888888888888888888888888888888887775555 8888655567888888888888
Q ss_pred cccccccccCCCccCCCcccEEEEeccCCcCccCC-ccccccccceecccccccccccCCCCCcccccceeecccCcCCC
Q 001494 153 YSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPS-EIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFG 231 (1067)
Q Consensus 153 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 231 (1067)
.-|++.-+..+.|..+++|..|.+.+|.+. .++. .|..+..++.+.+..|.+. ...+++.|.. ++.
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~-~~a------ 214 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLAD-DLA------ 214 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccc-----cccccchhhh-HHh------
Confidence 888888888888888888888888888887 5555 7888888888888888743 1222222221 111
Q ss_pred CCCcccCCcccCCceEecCcccccccCcccc-CccceeeEEEecccccccCC-CccccCCcccEEEeccccccCCccccc
Q 001494 232 SIPSELGNLKYLSDLKLADNKLNGSIPHSLC-NLTNLVILYIYNNSLSGLIP-SEIGNLKFLSKIALSYNKFSGLIPHSL 309 (1067)
Q Consensus 232 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~l 309 (1067)
..|.+++......-..+.++++...-+.-|. .+..+..=..+.+...+.-| ..|..+++|++|+|++|+++++-+.+|
T Consensus 215 ~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aF 294 (498)
T KOG4237|consen 215 MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAF 294 (498)
T ss_pred hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhh
Confidence 2233344444445555555555543333332 12222222222232332323 346667777777777777777666777
Q ss_pred cCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeEEccCCcCc---------------
Q 001494 310 GNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLS--------------- 374 (1067)
Q Consensus 310 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--------------- 374 (1067)
.++..+++|+|..|+|..+....|.++..|+.|+|.+|+|+...|.+|..+..|.+|++-.|.+.
T Consensus 295 e~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~ 374 (498)
T KOG4237|consen 295 EGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKK 374 (498)
T ss_pred cchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhC
Confidence 77777777777777776666666777777777777777777666777777777777776666543
Q ss_pred ---cccCcccCCCCCCCEEEccCCcccc---cCCCccccccCCcEEEcccCcCcccCchhhhCcCCCcE-EeCCCCcccC
Q 001494 375 ---GSIPCEIGNLKSLSYLNLAFNKLTS---SIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVKLTK-LFLGDNQFQG 447 (1067)
Q Consensus 375 ---~~~p~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~L~~N~l~~ 447 (1067)
|..|.. .-..++.+.++++.+.. ..|+..+-.+ ++.-| ...+.+.+ ..-|+..+..
T Consensus 375 ~~~~~~~Cq--~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~------------s~~cP---~~c~c~~tVvRcSnk~lk~ 437 (498)
T KOG4237|consen 375 SVVGNPRCQ--SPGFVRQIPISDVAFGDFRCGGPEELGCLT------------SSPCP---PPCTCLDTVVRCSNKLLKL 437 (498)
T ss_pred CCCCCCCCC--CCchhccccchhccccccccCCccccCCCC------------CCCCC---CCcchhhhhHhhcccchhh
Confidence 111110 11233444444443321 1111110000 00001 11122221 2233333333
Q ss_pred CCCCCCCCCcccEEeccCcccccccccccccCCceeEEEcccccccCCCCCCCCCCCCcceEeccCC
Q 001494 448 PIPNLKNLTSLVRVHLDRNYLTSNISESFYIYPNLTFIDLSYNNLYGEISSDWGRCPKLGALDFSKN 514 (1067)
Q Consensus 448 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N 514 (1067)
.++.+. ....++++.+|.++.++.+ .+..| .+|+|+|+|.......|.++..|.+|-+|+|
T Consensus 438 lp~~iP--~d~telyl~gn~~~~vp~~---~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 438 LPRGIP--VDVTELYLDGNAITSVPDE---LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred cCCCCC--chhHHHhcccchhcccCHH---HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 322221 2345677777777777776 33445 7788888877666667777777777777765
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=1e-24 Score=281.14 Aligned_cols=349 Identities=25% Similarity=0.298 Sum_probs=222.9
Q ss_pred ccCCcCCCCCCcceEeccCCc------cccCCCCcccccC-ccceeecCCCcccCCCCcccccccccceecccccccccC
Q 001494 64 LHDFSFSSFPHLAYLDLWSNQ------LFGNIPPQIGNIS-KLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGS 136 (1067)
Q Consensus 64 l~~~~~~~~~~l~~L~L~~n~------l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 136 (1067)
++...|..+.+|+.|.+..+. +...+|..|..++ +|+.|++.++.+. .+|..| .+.+|++|+|++|++. .
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-K 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-c
Confidence 445567888888888886553 3345677776663 5888888888776 667766 4677888888888876 5
Q ss_pred CCCccccccccccccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccccCCCCCcc
Q 001494 137 IPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNL 216 (1067)
Q Consensus 137 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 216 (1067)
+|..+..+++|+.|+|+++.....+| .++.+++|+.|+|++|.....+|..++++++|+.|++++|..-+.+|..+ ++
T Consensus 626 L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l 703 (1153)
T PLN03210 626 LWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NL 703 (1153)
T ss_pred cccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CC
Confidence 77777778888888887765444455 36777788888887776555777777777778888877765444666655 67
Q ss_pred cccceeecccCcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEecccccccCCCccccCCcccEEEe
Q 001494 217 SNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIAL 296 (1067)
Q Consensus 217 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 296 (1067)
++|+.|++++|...+.+|.. ..+|+.|++++|.+. .+|..+ .+++|+.|++.++..... +.
T Consensus 704 ~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l-~~------------- 764 (1153)
T PLN03210 704 KSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKL-WE------------- 764 (1153)
T ss_pred CCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhc-cc-------------
Confidence 77777777777655455543 245667777777765 455544 456666666655432211 00
Q ss_pred ccccccCCccccccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeEEccCCcCccc
Q 001494 297 SYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLSGS 376 (1067)
Q Consensus 297 s~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 376 (1067)
.+....+..+...++|+.|++++|...+.+|..++++++|+.|++++|...+.+|..+ ++++|+.|++++|.....
T Consensus 765 ---~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~ 840 (1153)
T PLN03210 765 ---RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRT 840 (1153)
T ss_pred ---cccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccc
Confidence 0111111122233556666666666666666666666667777776654333555544 566777777776654434
Q ss_pred cCcccCCCCCCCEEEccCCcccccCCCccccccCCcEEEcccCcCcccCchhhhCcCCCcEEeCCCCc
Q 001494 377 IPCEIGNLKSLSYLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVKLTKLFLGDNQ 444 (1067)
Q Consensus 377 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 444 (1067)
+|.. ..+|++|+|++|.|+ .+|.++..+++|++|++++|+--..+|..+..++.|+.+++++|.
T Consensus 841 ~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 841 FPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 4432 256777777777776 566777777777777777743222455566777777777777764
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=4e-24 Score=275.68 Aligned_cols=305 Identities=25% Similarity=0.253 Sum_probs=190.0
Q ss_pred cccccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccccCCCCCcccccceeeccc
Q 001494 147 LNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSS 226 (1067)
Q Consensus 147 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 226 (1067)
|+.|++.++.+.. +|..| ...+|+.|++++|++. .+|..+..+++|+.|+|+++...+.+|. ++.+++|+.|+|++
T Consensus 591 Lr~L~~~~~~l~~-lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~ 666 (1153)
T PLN03210 591 LRLLRWDKYPLRC-MPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSD 666 (1153)
T ss_pred cEEEEecCCCCCC-CCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecC
Confidence 4444444444433 23333 2345555555555554 3444455555555555554433234442 44455555555555
Q ss_pred CcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEecccccccCCCccccCCcccEEEeccccccCCcc
Q 001494 227 NSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIP 306 (1067)
Q Consensus 227 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 306 (1067)
|.....+|..++++++|+.|++++|...+.+|..+ ++++|+.|++++|...+.+|.. .++|+.|++++|.+... |
T Consensus 667 c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~l-P 741 (1153)
T PLN03210 667 CSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEF-P 741 (1153)
T ss_pred CCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccc-c
Confidence 54444455555555555555555543333444433 4555555555555443333332 23455555555555432 3
Q ss_pred ccccCCccccEEeccCCCC-------cCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeEEccCCcCccccCc
Q 001494 307 HSLGNLSNIAFLFLDSNSL-------FGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLSGSIPC 379 (1067)
Q Consensus 307 ~~l~~l~~L~~L~L~~N~l-------~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 379 (1067)
..+ .+++|++|.+.++.. ....+..+...++|+.|++++|...+.+|..++++++|+.|++++|...+.+|.
T Consensus 742 ~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~ 820 (1153)
T PLN03210 742 SNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPT 820 (1153)
T ss_pred ccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCC
Confidence 322 345555555554321 122222334457899999999988888999999999999999999865557887
Q ss_pred ccCCCCCCCEEEccCCcccccCCCccccccCCcEEEcccCcCcccCchhhhCcCCCcEEeCCC-CcccCCCCCCCCCCcc
Q 001494 380 EIGNLKSLSYLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVKLTKLFLGD-NQFQGPIPNLKNLTSL 458 (1067)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~l~~l~~L 458 (1067)
.+ .+++|++|++++|.....+|.. .++|+.|+|++|.|+ .+|..+..+++|++|+|++ |.+...+.....+++|
T Consensus 821 ~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L 895 (1153)
T PLN03210 821 GI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHL 895 (1153)
T ss_pred CC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCC
Confidence 66 7899999999998665555543 468999999999998 5788999999999999998 5666666667788889
Q ss_pred cEEeccCc
Q 001494 459 VRVHLDRN 466 (1067)
Q Consensus 459 ~~L~L~~N 466 (1067)
+.++++++
T Consensus 896 ~~L~l~~C 903 (1153)
T PLN03210 896 ETVDFSDC 903 (1153)
T ss_pred CeeecCCC
Confidence 98888765
No 417
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=1.4e-24 Score=272.12 Aligned_cols=194 Identities=17% Similarity=0.188 Sum_probs=139.7
Q ss_pred cCCC-CeeeeeeEEE-------eeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCe
Q 001494 851 EIRH-RNIVKFYGFC-------SHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPI 922 (1067)
Q Consensus 851 ~l~h-~niv~l~~~~-------~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 922 (1067)
.++| +||+++++++ .+.+.++.+|||+ +++|.+++... ...+++.+++.++.||++||+|||++ ||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 4456 6888888877 2334677889987 56999999532 34589999999999999999999999 99
Q ss_pred eecCCCCCceeeCC-------------------CCCeEEeccccceecCCCC----------------Cccccccccccc
Q 001494 923 VHRDISSKNVLLDF-------------------KNEARVSDFGIAKFLKPDS----------------SNWTELAGTYGY 967 (1067)
Q Consensus 923 vHrDlk~~Nill~~-------------------~~~~kl~DfG~a~~~~~~~----------------~~~~~~~gt~~y 967 (1067)
+||||||+|||++. ++.+|++|||+++...... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 4456667777665422100 001123578899
Q ss_pred cCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhc
Q 001494 968 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISC 1047 (1067)
Q Consensus 968 ~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 1047 (1067)
||||++.+..++.++|||||||++|||++|..|+...... ..........+.. .....+...++.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 248 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT------MSSLRHRVLPPQI-------LLNWPKEASFCLWL 248 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH------HHHHHHhhcChhh-------hhcCHHHHHHHHHh
Confidence 9999999999999999999999999999998886422110 0000111111110 11122356788899
Q ss_pred cCCCCCCCCCHHHHHH
Q 001494 1048 LDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1048 l~~dP~~Rpt~~evl~ 1063 (1067)
|+++|.+||+|.|+++
T Consensus 249 L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 249 LHPEPSCRPSMSELLQ 264 (793)
T ss_pred CCCChhhCcChHHHhh
Confidence 9999999999999976
No 418
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=1.2e-23 Score=214.11 Aligned_cols=165 Identities=25% Similarity=0.287 Sum_probs=124.2
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccc
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWT 959 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 959 (1067)
|+|.++++.. ...+++.++..++.|++.||+|||++ + ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 6888888542 34589999999999999999999999 6 999999999999999 99998765432
Q ss_pred cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHH-
Q 001494 960 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLI- 1038 (1067)
Q Consensus 960 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1038 (1067)
..||+.|||||++.+..++.++|||||||++|||+||+.||........ ........... ..............
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~ 138 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA---ILEILLNGMPA-DDPRDRSNLESVSAA 138 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH---HHHHHHHHhcc-CCccccccHHHHHhh
Confidence 2678999999999999999999999999999999999999864332111 11111111111 10100011112222
Q ss_pred -HHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1039 -SFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1039 -~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
++.+++.+||+.+|++||++.|+++.+.
T Consensus 139 ~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 139 RSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred hhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 5899999999999999999999998753
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=3.6e-23 Score=246.46 Aligned_cols=266 Identities=29% Similarity=0.397 Sum_probs=152.6
Q ss_pred cceeecCCCcccCCCCcccccccccceecccccccccCCCCccccccccccccccccccccccCCCccCCCcccEEEEec
Q 001494 99 LKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVTLCLYN 178 (1067)
Q Consensus 99 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 178 (1067)
-..|||++|+++ .+|+.+. ++|+.|++++|+++ .+|.. +++|++|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---------------------------p~~Lk~LdLs~ 251 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---------------------------PPELRTLEVSG 251 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---------------------------CCCCcEEEecC
Confidence 345556665555 4555443 24555555555555 23321 23455555555
Q ss_pred cCCcCccCCccccccccceecccccccccccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccccC
Q 001494 179 NLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIP 258 (1067)
Q Consensus 179 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 258 (1067)
|+|+ .+|.. .++|+.|+|++|.++ .+|..+ ++|+.|++++|+++ .+|.. .++|+.|+|++|++++ +|
T Consensus 252 N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp 318 (788)
T PRK15387 252 NQLT-SLPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LP 318 (788)
T ss_pred CccC-cccCc---ccccceeeccCCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CC
Confidence 5554 33332 234445555555554 333322 23445555555555 23332 2345555555555553 33
Q ss_pred ccccCccceeeEEEecccccccCCCccccCCcccEEEeccccccCCccccccCCccccEEeccCCCCcCCCCcccccCCC
Q 001494 259 HSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGLIPSELRNLKS 338 (1067)
Q Consensus 259 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 338 (1067)
... .+|+.|++++|+++++ |.. ..+|+.|+|++|+|+++ |.. ..+|+.|++++|+|..+ |.. ..+
T Consensus 319 ~lp---~~L~~L~Ls~N~L~~L-P~l---p~~Lq~LdLS~N~Ls~L-P~l---p~~L~~L~Ls~N~L~~L-P~l---~~~ 383 (788)
T PRK15387 319 ALP---SELCKLWAYNNQLTSL-PTL---PSGLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLTSL-PAL---PSG 383 (788)
T ss_pred CCc---ccccccccccCccccc-ccc---ccccceEecCCCccCCC-CCC---CcccceehhhccccccC-ccc---ccc
Confidence 221 2355555666666542 321 13566666666666643 222 23456666777776643 332 246
Q ss_pred CCeEEecCccccccCCccccCCCCCCeEEccCCcCccccCcccCCCCCCCEEEccCCcccccCCCccccccCCcEEEccc
Q 001494 339 LSILELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLSGSIPCEIGNLKSLSYLNLAFNKLTSSIPISLSNLTNLSVLSFYK 418 (1067)
Q Consensus 339 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 418 (1067)
|+.|++++|+|++ +|.. .++|+.|++++|.+++ +|... .+|+.|++++|+|+ .+|..+.++++|+.|+|++
T Consensus 384 L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 384 LKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 454 (788)
T ss_pred cceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCC
Confidence 7788888888874 4443 2568888888888884 56432 46788899999988 6788888899999999999
Q ss_pred CcCcccCchhhhCc
Q 001494 419 NSLSGAIPKEYRNL 432 (1067)
Q Consensus 419 N~l~~~~~~~~~~l 432 (1067)
|++++..+..+..+
T Consensus 455 N~Ls~~~~~~L~~l 468 (788)
T PRK15387 455 NPLSERTLQALREI 468 (788)
T ss_pred CCCCchHHHHHHHH
Confidence 99988877776544
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=6e-23 Score=244.55 Aligned_cols=260 Identities=28% Similarity=0.344 Sum_probs=207.0
Q ss_pred cccccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccccCCCCCcccccceeeccc
Q 001494 147 LNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSS 226 (1067)
Q Consensus 147 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 226 (1067)
-..|+|+.|.++. +|..+. ++|+.|++++|+++ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lts-LP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCCc-CCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 4556777777765 555554 47899999999998 57753 578999999999999 56754 35889999999
Q ss_pred CcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEecccccccCCCccccCCcccEEEeccccccCCcc
Q 001494 227 NSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIP 306 (1067)
Q Consensus 227 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 306 (1067)
|.++ .+|..+ +.|+.|++++|+++ .+|.. +++|+.|+|++|+++++ |... .+|+.|++++|+++++ |
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~L-p~lp---~~L~~L~Ls~N~L~~L-P 338 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASL-PALP---SELCKLWAYNNQLTSL-P 338 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCccccC-CCCc---ccccccccccCccccc-c
Confidence 9998 456543 56889999999999 56653 47899999999999975 5432 4688899999999864 4
Q ss_pred ccccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCCCCCCeEEccCCcCccccCcccCCCCC
Q 001494 307 HSLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNLTNLSVLFIYNNSLSGSIPCEIGNLKS 386 (1067)
Q Consensus 307 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 386 (1067)
.. ..+|++|+|++|+|+++ |.. ..+|+.|++++|+|+. +|.. ..+|+.|++++|.|++ +|.. .++
T Consensus 339 ~l---p~~Lq~LdLS~N~Ls~L-P~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~ 403 (788)
T PRK15387 339 TL---PSGLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSE 403 (788)
T ss_pred cc---ccccceEecCCCccCCC-CCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccC
Confidence 32 25799999999999975 433 3578899999999995 6653 3579999999999994 5643 368
Q ss_pred CCEEEccCCcccccCCCccccccCCcEEEcccCcCcccCchhhhCcCCCcEEeCCCCcccCCCC
Q 001494 387 LSYLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVKLTKLFLGDNQFQGPIP 450 (1067)
Q Consensus 387 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 450 (1067)
|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+.++.+|+.|+|++|++++..+
T Consensus 404 L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 404 LKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred CCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHH
Confidence 9999999999985 6654 357889999999998 678999999999999999999987543
No 421
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.4e-22 Score=224.22 Aligned_cols=166 Identities=20% Similarity=0.226 Sum_probs=129.8
Q ss_pred HhcCCCccCccccCCceeEEEEEEC--CCcEEEEEEeCCCCC--CChhHHHHHHHHHHHHhcCCCCeeee-eeEEEeeCC
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELA--SGEIIAVKKFHSPLP--GEMTFQQEFLNEVKALTEIRHRNIVK-FYGFCSHAQ 868 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~ 868 (1067)
....|...+.||+|+||+||+|+.. +++.||||+...... ......+.+.+|++++++++|+|+++ +++ .+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TG 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cC
Confidence 4567999999999999999999764 578889998753211 12223567899999999999999985 443 25
Q ss_pred ceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCC-CCCceeeCCCCCeEEecccc
Q 001494 869 HSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDI-SSKNVLLDFKNEARVSDFGI 947 (1067)
Q Consensus 869 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDl-k~~Nill~~~~~~kl~DfG~ 947 (1067)
..|+||||++|++|.... ... ...++.++++|++|||++ ||+|||| ||+||+++.++.+||+|||+
T Consensus 92 ~~~LVmE~~~G~~L~~~~----~~~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLAR----PHG------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CcEEEEEccCCCCHHHhC----ccc------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 689999999999997321 101 146788999999999999 9999999 99999999999999999999
Q ss_pred ceecCCCCCc--------cccccccccccCccccccC
Q 001494 948 AKFLKPDSSN--------WTELAGTYGYVAPELAYTM 976 (1067)
Q Consensus 948 a~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~ 976 (1067)
|+.+...... .+...+++.|+|||++...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9977543311 1345678889999987644
No 422
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=3.2e-22 Score=204.00 Aligned_cols=254 Identities=17% Similarity=0.225 Sum_probs=196.1
Q ss_pred cCCCccCccccCCceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCceeEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHSFIV 873 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 873 (1067)
-.|+++++||+|.||+++.|+ +-++++||||.-.... ...++..|.+..+.| ..++|...+-+..++.+-.+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 468999999999999999985 5689999999865321 235678899999888 479999999888888899999
Q ss_pred EEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCC-----eEEeccccc
Q 001494 874 YEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNE-----ARVSDFGIA 948 (1067)
Q Consensus 874 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~-----~kl~DfG~a 948 (1067)
+|.+ |.+|+|... -....++..++..||.|+..-++|+|++ ..|.|||||+|+||...+. +.|+|||+|
T Consensus 103 idLL-GPSLEDLFD--~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFD--LCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhh-CcCHHHHHH--HhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 9988 678988883 3445689999999999999999999999 9999999999999986653 889999999
Q ss_pred eecCCCCC-------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhc
Q 001494 949 KFLKPDSS-------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEI 1021 (1067)
Q Consensus 949 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1021 (1067)
+.+.++.. ......||.+||+-....+.+.+.+.|.-|+|-++++++.|..||.+..... ..+..+.+
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t-----nK~kYeKI 251 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT-----NKEKYEKI 251 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc-----hHHHHHHh
Confidence 98865432 2346789999999999999999999999999999999999999998765421 11122222
Q ss_pred cCCCCCCCC-cchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1022 LDPRLPIPS-HNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1022 ~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
-+....-+. ......+.++...+.-.-..+-.+-|+++-+...+
T Consensus 252 Ge~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf 296 (449)
T KOG1165|consen 252 GETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLF 296 (449)
T ss_pred ccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 222222121 22223344566666666667777778876655443
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=5.3e-22 Score=221.64 Aligned_cols=254 Identities=22% Similarity=0.261 Sum_probs=188.3
Q ss_pred CCCccCccccCCceeEEEEEECCC--cEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC----CCeeeeeeEEE-eeCCc
Q 001494 797 DFDDEHCIGKGGQGSVYKVELASG--EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR----HRNIVKFYGFC-SHAQH 869 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~----h~niv~l~~~~-~~~~~ 869 (1067)
+|.+.++||+|+||.||.|..... +.+|+|.......... ..+..|+.++..+. -+++..+++.+ ..+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 799999999999999999976543 5789888765422211 15667888888776 26899999998 57778
Q ss_pred eeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC-----CeEEec
Q 001494 870 SFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN-----EARVSD 944 (1067)
Q Consensus 870 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~-----~~kl~D 944 (1067)
.|+||+.+ |.+|.++..... ...++..++.+|+.|++.+|+++|+. |++||||||.|+.+.... .+.+.|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 99999987 679999875444 56799999999999999999999999 999999999999998663 589999
Q ss_pred cccce--ecCCCCC--------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhh
Q 001494 945 FGIAK--FLKPDSS--------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNL 1014 (1067)
Q Consensus 945 fG~a~--~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~ 1014 (1067)
||+|+ .+..... ......||..|++++...+...+.+.|+||++.++.|+..|..||.............
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 99998 3322211 1234569999999999999999999999999999999999999975444221111111
Q ss_pred hhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001494 1015 NIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1065 (1067)
.......... .....+. ++.++...+-..+..++|.+..+.+.+
T Consensus 251 ~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l 294 (322)
T KOG1164|consen 251 KDPRKLLTDR----FGDLKPE---EFAKILEYIDSLDYEDKPDYEKLAELL 294 (322)
T ss_pred HHhhhhcccc----ccCCChH---HHHHHHHHhhccCCcCCCCHHHHHHHH
Confidence 1111111111 0111112 355555566668999999999888765
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.8e-22 Score=196.81 Aligned_cols=257 Identities=20% Similarity=0.294 Sum_probs=198.6
Q ss_pred hcCCCccCccccCCceeEEEE-EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCceeE
Q 001494 795 TNDFDDEHCIGKGGQGSVYKV-ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 795 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 872 (1067)
...|..+++||.|+||.+|.| ...+|+.||||+-..... ..++..|.++.+.++ -..|+.+..|..++..-.+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 367999999999999999998 467899999999764322 245778999999886 4788888888899999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC---CCeEEeccccce
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK---NEARVSDFGIAK 949 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~---~~~kl~DfG~a~ 949 (1067)
|||.. |.+|++...- ....++..+++-.+-|++.-++|+|.+ +++||||||+|+|+.-+ ..+.++|||+|+
T Consensus 89 VMdLL-GPsLEdLfnf--C~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNF--CSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eeecc-CccHHHHHHH--HhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchh
Confidence 99988 6799988842 334578889999999999999999999 89999999999999754 358899999998
Q ss_pred ecCCCCC-------ccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhcc
Q 001494 950 FLKPDSS-------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEIL 1022 (1067)
Q Consensus 950 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1022 (1067)
.+.+... .-....||.+|.+-....+...+.+.|+-|+|.++.++-.|..||++...... .+..+.+.
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-----~QKyEkI~ 237 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-----KQKYEKIS 237 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-----HHHHHHHH
Confidence 7754322 22457899999998888888889999999999999999999999987654321 12222222
Q ss_pred CCCCCCCCcc-hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhcC
Q 001494 1023 DPRLPIPSHN-VQEKLISFVEVAISCLDESPESRPTMQKVSQLLKI 1067 (1067)
Q Consensus 1023 ~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~ 1067 (1067)
...+..+.+. ....+.++.-.+.-|-..--++-|+..-+.+.+++
T Consensus 238 EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFri 283 (341)
T KOG1163|consen 238 EKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRI 283 (341)
T ss_pred HhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHH
Confidence 2333322221 12233457777788888888888888888777653
No 425
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=4.4e-23 Score=203.89 Aligned_cols=247 Identities=21% Similarity=0.315 Sum_probs=186.7
Q ss_pred CCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEec
Q 001494 798 FDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYL 877 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 877 (1067)
.....+|.+...|+.|+|+++.+ .+++|++..... ..+..++|.+|.-.++-+.||||..++|.|.......++..||
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~-t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGN-DIVAKILNVREV-TARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhccCCCcccccccccCc-chhhhhhhhhhc-chhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 34456788999999999999844 455676654322 2223467888999999999999999999999999999999999
Q ss_pred cCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCee-ecCCCCCceeeCCCCCeEEe--ccccceecCCC
Q 001494 878 EMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIV-HRDISSKNVLLDFKNEARVS--DFGIAKFLKPD 954 (1067)
Q Consensus 878 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv-HrDlk~~Nill~~~~~~kl~--DfG~a~~~~~~ 954 (1067)
+-|+|+..+++... --.+..++.+++.++|+|++|||+.. +++ ---+.+..|++|++.+++|+ |--++.+.
T Consensus 270 p~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarismad~kfsfqe--- 343 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE--- 343 (448)
T ss_pred cchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheecccceeeeec---
Confidence 99999999976443 33677899999999999999999983 444 34688999999999988874 33333211
Q ss_pred CCccccccccccccCccccccCCCC---ccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCc
Q 001494 955 SSNWTELAGTYGYVAPELAYTMKVT---EKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSH 1031 (1067)
Q Consensus 955 ~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1067)
....-.|.||+||.+...+.+ .++|+|||++++||+-|+..||...++.+...... ...-+..+|+.
T Consensus 344 ----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia------leglrv~ippg 413 (448)
T KOG0195|consen 344 ----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA------LEGLRVHIPPG 413 (448)
T ss_pred ----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh------hccccccCCCC
Confidence 112336789999999877643 47999999999999999999998777654322111 11123334443
Q ss_pred chHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 1032 NVQEKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 1032 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
... .+.+++.-|+..||.+||.+..++-.||
T Consensus 414 is~----hm~klm~icmnedpgkrpkfdmivpile 444 (448)
T KOG0195|consen 414 ISR----HMNKLMNICMNEDPGKRPKFDMIVPILE 444 (448)
T ss_pred ccH----HHHHHHHHHhcCCCCcCCCcceehhhHH
Confidence 333 4888999999999999999999987775
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=2.2e-22 Score=241.88 Aligned_cols=279 Identities=24% Similarity=0.383 Sum_probs=193.3
Q ss_pred CccceeecCCCcccCCCCcccccccccceecccccccccCCCCccccccccccccccccccccccCCCccCCCcccEEEE
Q 001494 97 SKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVTLCL 176 (1067)
Q Consensus 97 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 176 (1067)
.+...|++++++++ .+|..+. +.|+.|+|++|+++ .+|..+. .+|+.|++++|.+++ +|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTS-IPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCcccc-CChhhh--ccccEEEC
Confidence 34677888888777 5676553 46788888888887 5666554 478888888888876 454443 46888888
Q ss_pred eccCCcCccCCccccccccceecccccccccccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccc
Q 001494 177 YNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGS 256 (1067)
Q Consensus 177 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 256 (1067)
++|+++ .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|+|++|+|++ +|..+. ++|+.|++++|+++ .
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~ 318 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT-A 318 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-c
Confidence 888887 6777664 47888888888888 5676664 478888888888884 555443 46888888888888 4
Q ss_pred cCccccCccceeeEEEecccccccCCCccccCCcccEEEeccccccCCccccccCCccccEEeccCCCCcCCCCcccccC
Q 001494 257 IPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGLIPSELRNL 336 (1067)
Q Consensus 257 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 336 (1067)
+|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+|+. +|..+. ++|+.|++++|+++.+ |..+.
T Consensus 319 LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP~~lp--~~L~~LdLs~N~Lt~L-P~~l~-- 387 (754)
T PRK15370 319 LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV-LPETLP--PTITTLDVSRNALTNL-PENLP-- 387 (754)
T ss_pred CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCc-CChhhc--CCcCEEECCCCcCCCC-CHhHH--
Confidence 565443 578888888888886 455443 688888999888874 455543 5788899999988865 44443
Q ss_pred CCCCeEEecCccccccCCcc----ccCCCCCCeEEccCCcCccccCcccCCCCCCCEEEccCCcccc-cCCCccccccCC
Q 001494 337 KSLSILELGNNKLCGSIPHF----LGNLTNLSVLFIYNNSLSGSIPCEIGNLKSLSYLNLAFNKLTS-SIPISLSNLTNL 411 (1067)
Q Consensus 337 ~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L 411 (1067)
.+|+.|++++|+++ .+|.. ++.++++..|++.+|.++. ..+.+|+.| ++.+.+.| .++...+.+.++
T Consensus 388 ~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l 459 (754)
T PRK15370 388 AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGPRVLFAMGDFSIV 459 (754)
T ss_pred HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCCcccccccccccc
Confidence 36888899999988 44543 3445788899999998872 234445555 34454443 233344444544
Q ss_pred cE
Q 001494 412 SV 413 (1067)
Q Consensus 412 ~~ 413 (1067)
+.
T Consensus 460 ~~ 461 (754)
T PRK15370 460 RV 461 (754)
T ss_pred cc
Confidence 44
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1.7e-22 Score=238.59 Aligned_cols=255 Identities=19% Similarity=0.253 Sum_probs=188.6
Q ss_pred CccCccccCCceeEEEEE-ECCCcEEEEEEeCC---CCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 799 DDEHCIGKGGQGSVYKVE-LASGEIIAVKKFHS---PLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 799 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
...+++|.|++|.|+.+. ....+..+.|.+.. +...+......+..|..+-..++|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 356789999999888764 33444455554431 22223333334777888889999999998888777777666669
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
||+++ +|..++... ..+...++..+++|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.+..+..+
T Consensus 401 E~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 999888543 3477888899999999999999999 9999999999999999999999999999876544
Q ss_pred CC----ccccccccccccCccccccCCCCc-cchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCC
Q 001494 955 SS----NWTELAGTYGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIP 1029 (1067)
Q Consensus 955 ~~----~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1067)
.. .....+|+..|+|||++.+..|++ ..||||.|+++..|.+|+.||.......... ..............+
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~~~~~~~~~~~~~ 550 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTNNYSDQRNIFEGP 550 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch---hhhccccccccccCh
Confidence 32 345678999999999999999876 6899999999999999999975333211110 000000000011112
Q ss_pred CcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1030 SHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1030 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...........+.++.+++++||.+|.|+.+|++
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 2223344456789999999999999999999986
No 428
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=2.9e-20 Score=210.89 Aligned_cols=260 Identities=27% Similarity=0.410 Sum_probs=197.6
Q ss_pred CCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCC-eeeeeeEEEeeCCceeEEEEe
Q 001494 798 FDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR-NIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~E~ 876 (1067)
|...+.||.|+||.||++... ..+|+|.+.............+.+|+.+++.+.|+ +++++.+++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 567788999999999999777 78899999766544433567899999999999988 799999999777778999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCC-CeEEeccccceecCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKN-EARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~-~~kl~DfG~a~~~~~~~ 955 (1067)
+.++++.+++........+.......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997775432113578889999999999999999999 999999999999999998 69999999998665443
Q ss_pred C------ccccccccccccCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCC--
Q 001494 956 S------NWTELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDP-- 1024 (1067)
Q Consensus 956 ~------~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 1024 (1067)
. ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||........ .............+
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA-TSQTLKIILELPTPSL 235 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcccc-HHHHHHHHHhcCCccc
Confidence 2 2456789999999999887 5788999999999999999999999654432100 00001111111111
Q ss_pred CCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1025 RLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1025 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
...............+.+++..|+..+|..|.++.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 000000000112235788999999999999999887654
No 429
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=1.4e-21 Score=234.81 Aligned_cols=264 Identities=24% Similarity=0.391 Sum_probs=201.7
Q ss_pred cccceecccccccccCCCCccccccccccccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecc
Q 001494 121 SYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNL 200 (1067)
Q Consensus 121 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 200 (1067)
.+...|+++++.++ .+|..+. ++|+.|+|++|.++. +|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 35678999999988 5777664 579999999999997 455443 58999999999998 6777664 47999999
Q ss_pred cccccccccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEeccccccc
Q 001494 201 YNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGL 280 (1067)
Q Consensus 201 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 280 (1067)
++|+++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|+++.+
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTAL 319 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCccccC
Confidence 999998 6787665 57999999999998 5777664 47999999999998 4666553 4789999999999864
Q ss_pred CCCccccCCcccEEEeccccccCCccccccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCccccccCCccccCC
Q 001494 281 IPSEIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGSIPHFLGNL 360 (1067)
Q Consensus 281 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 360 (1067)
|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|+++. +|..+.
T Consensus 320 -P~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~-- 387 (754)
T PRK15370 320 -PETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV-LPETLP--PTITTLDVSRNALTN-LPENLP-- 387 (754)
T ss_pred -Cccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCCc-CChhhc--CCcCEEECCCCcCCC-CCHhHH--
Confidence 5443 2689999999999987 455553 689999999999985 455553 689999999999984 555554
Q ss_pred CCCCeEEccCCcCccccCccc----CCCCCCCEEEccCCcccccCCCccccccCCcEEEcccCcCc
Q 001494 361 TNLSVLFIYNNSLSGSIPCEI----GNLKSLSYLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSLS 422 (1067)
Q Consensus 361 ~~L~~L~l~~N~l~~~~p~~~----~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 422 (1067)
..|+.|++++|+++ .+|..+ ..++++..|++.+|+++. ..+.+|+.| ++.+.+.
T Consensus 388 ~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~ 445 (754)
T PRK15370 388 AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQ 445 (754)
T ss_pred HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhccccc
Confidence 36889999999998 455543 445788999999999873 344455555 3444443
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=1.4e-20 Score=192.92 Aligned_cols=174 Identities=14% Similarity=0.165 Sum_probs=135.8
Q ss_pred HhcCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHH------HHHHHHHHhcCCCCeeeeeeEEEeeC
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQE------FLNEVKALTEIRHRNIVKFYGFCSHA 867 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~e~~~l~~l~h~niv~l~~~~~~~ 867 (1067)
...+|+..+++|.|+||.||.++. ++..+|+|.+...........+. +.+|+..+.++.||+|+.+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357899999999999999999866 57789999998665544433333 57899999999999999999886543
Q ss_pred --------CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCC
Q 001494 868 --------QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNE 939 (1067)
Q Consensus 868 --------~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~ 939 (1067)
+..++||||++|.+|.++.. ++. ....+++.+++.+|+. |++|||+||+||+++.+|
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-
Confidence 35789999999999987731 222 2456999999999999 999999999999999988
Q ss_pred eEEeccccceecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHH
Q 001494 940 ARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 995 (1067)
Q Consensus 940 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell 995 (1067)
++++|||..+....+... ..+.....+..++|+|+||+.+..+.
T Consensus 173 i~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999988754321110 01333445667999999999877654
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=4.5e-20 Score=188.14 Aligned_cols=143 Identities=17% Similarity=0.203 Sum_probs=109.5
Q ss_pred cCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChh-----------------------HHHHHHHHHHHHhcCCCCee
Q 001494 801 EHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMT-----------------------FQQEFLNEVKALTEIRHRNI 857 (1067)
Q Consensus 801 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~e~~~l~~l~h~ni 857 (1067)
...||+|+||.||+|...+|+.||||+++........ .......|++.++++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999998889999999999754221110 01123459999999988776
Q ss_pred eeeeEEEeeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHH-HhCCCCCeeecCCCCCceeeCC
Q 001494 858 VKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYL-HNDCFPPIVHRDISSKNVLLDF 936 (1067)
Q Consensus 858 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivHrDlk~~Nill~~ 936 (1067)
.....+.. ...++||||++++++...... ...+++.++..++.|++.+++|+ |+. ||+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK---DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh---cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 44333322 234899999998877644322 23578899999999999999999 688 999999999999998
Q ss_pred CCCeEEeccccceecC
Q 001494 937 KNEARVSDFGIAKFLK 952 (1067)
Q Consensus 937 ~~~~kl~DfG~a~~~~ 952 (1067)
++.++++|||+|....
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 5889999999997543
No 432
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.81 E-value=1e-19 Score=192.11 Aligned_cols=236 Identities=21% Similarity=0.256 Sum_probs=152.6
Q ss_pred CCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCC----------CeeeeeeEEEe
Q 001494 797 DFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH----------RNIVKFYGFCS 865 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~ 865 (1067)
.+..++.||.|+++.||.++.. +|+.+|+|++..+........+++.+|.-....+.+ -.++--++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4566789999999999999765 699999999876654444556777777766655432 12222222221
Q ss_pred ---------eC---C-----ceeEEEEeccCCCHHHHhcc---cC-ccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeee
Q 001494 866 ---------HA---Q-----HSFIVYEYLEMGSLAMILSN---DA-AAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVH 924 (1067)
Q Consensus 866 ---------~~---~-----~~~lv~E~~~~g~L~~~l~~---~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 924 (1067)
.. . ..+++|+-+ .++|.+++.- .. ....+....++.+..|+.+.+++||++ |++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 11 1 235677777 4688777632 11 112234455667779999999999999 9999
Q ss_pred cCCCCCceeeCCCCCeEEeccccceecCCCCCccccccccccccCccccccC--------CCCccchhHHHHHHHHHHHh
Q 001494 925 RDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM--------KVTEKCDVYSFGVLALEVIK 996 (1067)
Q Consensus 925 rDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~DvwslGvil~ellt 996 (1067)
+||||+|++++.+|.++++||+.....+.. ......+..|.|||..... .++++.|.|++|+++|.|++
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~---~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTR---YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEE---EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCce---eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 999999999999999999999988765432 2213445779999976442 47889999999999999999
Q ss_pred CCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCC
Q 001494 997 GKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESR 1055 (1067)
Q Consensus 997 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1055 (1067)
|+.||+.......... . + ..+. +.++.+..+|..+|+.+|.+|
T Consensus 246 ~~lPf~~~~~~~~~~~----~---f--------~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW----D---F--------SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG----G---G--------TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc----c---c--------hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999875443211111 0 0 1112 344568999999999999988
No 433
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=1.5e-20 Score=218.84 Aligned_cols=245 Identities=22% Similarity=0.256 Sum_probs=182.1
Q ss_pred CCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCC-ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEE
Q 001494 797 DFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPG-EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYE 875 (1067)
Q Consensus 797 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 875 (1067)
+|...+.||.+.|=.|.+|+.+.|. |+||++.+..+. ..+..++-..|++ .+.++|||++++.-+-......|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 6788899999999999999999888 889998655422 2222333344555 556689999999988888888899999
Q ss_pred eccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec--CC
Q 001494 876 YLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL--KP 953 (1067)
Q Consensus 876 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~--~~ 953 (1067)
|+.+ +|+|.+.-+ .-+...+.+-|+.|++.|+.-+|.. ||+|||||.+|||++.-+-+.++||..-+.. ..
T Consensus 102 yvkh-nLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9865 888888532 2356667778999999999999999 9999999999999999999999999876532 11
Q ss_pred -CCCcccccccc----ccccCccccccC----------C-CCccchhHHHHHHHHHHHh-CCCCCCccccccccch---h
Q 001494 954 -DSSNWTELAGT----YGYVAPELAYTM----------K-VTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSL---N 1013 (1067)
Q Consensus 954 -~~~~~~~~~gt----~~y~aPE~~~~~----------~-~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~---~ 1013 (1067)
+...++.+..| ..|.|||.+... . .+++-||||+||+++|+++ |++||+.-..+..... .
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 12223333333 469999976542 1 4678999999999999998 7888875443322211 1
Q ss_pred hhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1014 LNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
.+..+.++.+. .+++++..|++.||.+|-+|.+.++.
T Consensus 255 ~e~~Le~Ied~--------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 255 PEQLLEKIEDV--------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhCcCc--------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 22222233222 37899999999999999999999875
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=6.1e-19 Score=176.30 Aligned_cols=185 Identities=11% Similarity=0.059 Sum_probs=136.6
Q ss_pred CccCccccCCceeEEEEEECCCcEEEEEEeCCCCCC-ChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCceeEEEEe
Q 001494 799 DDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPG-EMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 799 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
.+...|++|+||+||.+.. .+.+++.+.+.....- .......+.+|+++++++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999998766 5777777766532111 1111225789999999995 5889999886 446999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCC-CCCceeeCCCCCeEEeccccceecCCCC
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDI-SSKNVLLDFKNEARVSDFGIAKFLKPDS 955 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDl-k~~Nill~~~~~~kl~DfG~a~~~~~~~ 955 (1067)
++|.+|...... ....++.|++++++++|++ ||+|||| ||+||+++.++.++|+|||+|....+..
T Consensus 80 I~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999998754311 1134778999999999999 9999999 7999999999999999999998655433
Q ss_pred Cc-----c--------ccccccccccCccccccC-CCC-ccchhHHHHHHHHHHHhCCCCC
Q 001494 956 SN-----W--------TELAGTYGYVAPELAYTM-KVT-EKCDVYSFGVLALEVIKGKHPG 1001 (1067)
Q Consensus 956 ~~-----~--------~~~~gt~~y~aPE~~~~~-~~~-~~~DvwslGvil~elltg~~p~ 1001 (1067)
.. . .....++.|++|+...-- ..+ .+.+-++-|..+|.++||+.|.
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 21 0 012246777778743221 223 4677889999999999999984
No 435
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.6e-20 Score=209.47 Aligned_cols=227 Identities=25% Similarity=0.328 Sum_probs=181.2
Q ss_pred ccccCCceeEEEEE----ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCceeEEEEec
Q 001494 803 CIGKGGQGSVYKVE----LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQHSFIVYEYL 877 (1067)
Q Consensus 803 ~lG~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~ 877 (1067)
.+|+|+||.|+.++ ...|.-+|.|+.++......... ....|..++...+ ||.+|++.-.+..+...+++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 37999999999853 34577789988876544332222 4566788888886 999999999999999999999999
Q ss_pred cCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCc
Q 001494 878 EMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSN 957 (1067)
Q Consensus 878 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 957 (1067)
.+|++...+... ...++.........++-|++++|+. +|+|||+|++||+++.+|++++.|||.++........
T Consensus 80 rgg~lft~l~~~---~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 80 RGGDLFTRLSKE---VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred ccchhhhccccC---CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 999998777433 2356666777788999999999999 9999999999999999999999999999876543222
Q ss_pred cccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHH
Q 001494 958 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKL 1037 (1067)
Q Consensus 958 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1067)
+||..|||||++. .+..++|.||||++++||+||..||.. .....+....+..|.. ..
T Consensus 154 ----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il~~~~~~p~~----l~ 211 (612)
T KOG0603|consen 154 ----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRILKAELEMPRE----LS 211 (612)
T ss_pred ----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHhhhccCCchh----hh
Confidence 8999999999987 567899999999999999999999863 3334444444444443 33
Q ss_pred HHHHHHHHhccCCCCCCCCCH
Q 001494 1038 ISFVEVAISCLDESPESRPTM 1058 (1067)
Q Consensus 1038 ~~l~~li~~cl~~dP~~Rpt~ 1058 (1067)
..+.+++.++...+|..|--.
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhcc
Confidence 347888899999999999754
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=6.8e-19 Score=180.53 Aligned_cols=143 Identities=19% Similarity=0.243 Sum_probs=111.8
Q ss_pred cCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChh-----------------------HHHHHHHHHHHHhcCCCCee
Q 001494 801 EHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMT-----------------------FQQEFLNEVKALTEIRHRNI 857 (1067)
Q Consensus 801 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~e~~~l~~l~h~ni 857 (1067)
.+.||+|+||.||+|+..+|+.||||++......... ....+..|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999998779999999998765321000 01224578999999999987
Q ss_pred eeeeEEEeeCCceeEEEEeccCCCHHHH-hcccCccCCCChHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCceeeC
Q 001494 858 VKFYGFCSHAQHSFIVYEYLEMGSLAMI-LSNDAAAEDLEWTQRMSVIKGIADALSYLHN-DCFPPIVHRDISSKNVLLD 935 (1067)
Q Consensus 858 v~l~~~~~~~~~~~lv~E~~~~g~L~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDlk~~Nill~ 935 (1067)
.....+... ..++||||++++++... +.. ..++..++.+++.+++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 554444333 24899999998855433 321 346778899999999999999999 8 999999999999999
Q ss_pred CCCCeEEeccccceecCC
Q 001494 936 FKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 936 ~~~~~kl~DfG~a~~~~~ 953 (1067)
++.++|+|||+|+....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 89999999999987653
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=2e-21 Score=179.53 Aligned_cols=164 Identities=32% Similarity=0.561 Sum_probs=93.3
Q ss_pred CCCCCcceEeccCCccccCCCCcccccCccceeecCCCcccCCCCcccccccccceecccccccccCCCCcccccccccc
Q 001494 70 SSFPHLAYLDLWSNQLFGNIPPQIGNISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNN 149 (1067)
Q Consensus 70 ~~~~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 149 (1067)
..+.+.+.|.||+|.++ .+|+.++.|.+|+.|++++|+++ .+|.+++.+++|+.|+++-|++. .+|
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lp----------- 95 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILP----------- 95 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCc-----------
Confidence 34455555566666654 45555555555555555555555 55555555555555555555554 444
Q ss_pred ccccccccccccCCCccCCCcccEEEEeccCCc-CccCCccccccccceecccccccccccCCCCCcccccceeecccCc
Q 001494 150 LALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLS-GSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNS 228 (1067)
Q Consensus 150 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 228 (1067)
..|+.++.|+.|||..|++. ..+|+.|..++.|+.|+|++|.+. .+|..++++++|+.|.+..|.
T Consensus 96 -------------rgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 96 -------------RGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred -------------cccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCc
Confidence 44555555555555555543 245555555666666666666665 555556666666666666666
Q ss_pred CCCCCCcccCCcccCCceEecCcccccccCccccC
Q 001494 229 LFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCN 263 (1067)
Q Consensus 229 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 263 (1067)
+- .+|.+++.++.|++|.+.+|+++ .+|+.+++
T Consensus 162 ll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 162 LL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred hh-hCcHHHHHHHHHHHHhcccceee-ecChhhhh
Confidence 55 45666666666666666666665 45544443
No 438
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=3e-19 Score=186.26 Aligned_cols=195 Identities=22% Similarity=0.297 Sum_probs=134.9
Q ss_pred CCCeeeeeeEEEee---------------------------CCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHH
Q 001494 853 RHRNIVKFYGFCSH---------------------------AQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIK 905 (1067)
Q Consensus 853 ~h~niv~l~~~~~~---------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~ 905 (1067)
+|||||++.++|.+ ...+|+||..++. +|..++-. ...+...+.-|..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~----~~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT----RHRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc----CCCchHHHHHHHH
Confidence 59999999887643 3467999998875 78877732 2345566677889
Q ss_pred HHHHHHHHHHhCCCCCeeecCCCCCceeeC--CCC--CeEEeccccceecCC------CCCccccccccccccCcccccc
Q 001494 906 GIADALSYLHNDCFPPIVHRDISSKNVLLD--FKN--EARVSDFGIAKFLKP------DSSNWTELAGTYGYVAPELAYT 975 (1067)
Q Consensus 906 ~i~~~l~~LH~~~~~~ivHrDlk~~Nill~--~~~--~~kl~DfG~a~~~~~------~~~~~~~~~gt~~y~aPE~~~~ 975 (1067)
|+++|+.|||.+ ||.|||+|++|||+. +|+ ...|+|||.+-.-.. ..+......|.-.-||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 999999999999984 333 368899998743211 1122334567788999998765
Q ss_pred CCC------CccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccC
Q 001494 976 MKV------TEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLD 1049 (1067)
Q Consensus 976 ~~~------~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 1049 (1067)
.+- -.|+|.|+.|.+.||+++...||-......-.... .....++.-++ .....+++++...++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-------Yqe~qLPalp~---~vpp~~rqlV~~lL~ 495 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-------YQESQLPALPS---RVPPVARQLVFDLLK 495 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh-------hhhhhCCCCcc---cCChHHHHHHHHHhc
Confidence 431 24899999999999999999997532111110111 11111211111 122247889999999
Q ss_pred CCCCCCCCHHHHHHHh
Q 001494 1050 ESPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1050 ~dP~~Rpt~~evl~~L 1065 (1067)
.||.+|++..-....|
T Consensus 496 r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 496 RDPSKRVSPNIAANVL 511 (598)
T ss_pred CCccccCCccHHHhHH
Confidence 9999999876655554
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=1.1e-20 Score=174.82 Aligned_cols=163 Identities=34% Similarity=0.504 Sum_probs=133.2
Q ss_pred ccccceecccccccccCCCCccccccccccccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceec
Q 001494 120 LSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLN 199 (1067)
Q Consensus 120 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 199 (1067)
+++...|-||+|+++ .+|+.+..|.+|+.|++++|+|++ +|.+++.+++|+.|+++-|++. ..|..|+.++.|+.|+
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~-lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEE-LPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhh-cChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 334444445555544 444445555555555555555554 6677888999999999999998 8999999999999999
Q ss_pred ccccccc-cccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEeccccc
Q 001494 200 LYNNELN-GSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLS 278 (1067)
Q Consensus 200 L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 278 (1067)
|+.|++. ..+|..|..|+.|+-|+|+.|.+. .+|..++++++|+.|.+.+|.+- .+|..++.++.|++|++.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 9999986 468999999999999999999998 89999999999999999999998 89999999999999999999999
Q ss_pred ccCCCccccC
Q 001494 279 GLIPSEIGNL 288 (1067)
Q Consensus 279 ~~~p~~~~~l 288 (1067)
-+ |..++++
T Consensus 187 vl-ppel~~l 195 (264)
T KOG0617|consen 187 VL-PPELANL 195 (264)
T ss_pred ec-Chhhhhh
Confidence 65 5556554
No 440
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=4.4e-18 Score=203.90 Aligned_cols=195 Identities=22% Similarity=0.273 Sum_probs=160.5
Q ss_pred HhcCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC---CCeeeeeeEEEeeCCce
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR---HRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~ 870 (1067)
....|.+.+.+|+|+||+||+|...+|+.||+|+-+.+..-+. ---.+++.+|+ -+.|+.+..++.-.+.-
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEf------YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEF------YICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceee------eehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 3467888999999999999999888899999999876644332 22233444444 35566666666667778
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC-------CCCeEEe
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF-------KNEARVS 943 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~-------~~~~kl~ 943 (1067)
++|+||.+.|+|.+++. ..+.++|.-++.++.|+++.+++||.. +|||+||||+|++|.. ...++|+
T Consensus 770 ~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred eeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEE
Confidence 89999999999999996 345589999999999999999999999 9999999999999952 2348999
Q ss_pred ccccceecC--CCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 001494 944 DFGIAKFLK--PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1000 (1067)
Q Consensus 944 DfG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p 1000 (1067)
|||.+..+. ++.......++|-.+-.+|+..+.+.++..|.|.++.+++-|+.|+.-
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 999997653 445566778889999999999999999999999999999999999864
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=9.1e-20 Score=205.07 Aligned_cols=279 Identities=24% Similarity=0.222 Sum_probs=169.8
Q ss_pred EEEccCCccc-ccCCCccccccCCcEEEcccCcCccc----CchhhhCcCCCcEEeCCCCcccCCCCCCCCCCcccEEec
Q 001494 389 YLNLAFNKLT-SSIPISLSNLTNLSVLSFYKNSLSGA----IPKEYRNLVKLTKLFLGDNQFQGPIPNLKNLTSLVRVHL 463 (1067)
Q Consensus 389 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L 463 (1067)
.|+|..+.++ ...+..+..+.+|+.|+++++.++.. ++..+...+.|++++++++.+.+....+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~----------- 70 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGL----------- 70 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHH-----------
Confidence 4677888887 33445567777888888888887533 3445556667788888777665311000
Q ss_pred cCcccccccccccccCCceeEEEcccccccCCCCCCCCCCC---CcceEeccCCccCC----CCCCcccCC-CCCcEEEc
Q 001494 464 DRNYLTSNISESFYIYPNLTFIDLSYNNLYGEISSDWGRCP---KLGALDFSKNNITG----NIPPKIGYS-SQLEVLDL 535 (1067)
Q Consensus 464 ~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~---~L~~L~Ls~N~l~~----~~~~~~~~~-~~L~~L~L 535 (1067)
......+..+++|+.|++++|.+.+..+..+..+. +|++|++++|++++ .+...+..+ ++|+.|++
T Consensus 71 ------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L 144 (319)
T cd00116 71 ------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVL 144 (319)
T ss_pred ------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEc
Confidence 00112333455666666666666543333333333 36666666666652 112223344 66777777
Q ss_pred CCCcccCc----CcccccCCCccceeecccccccCCc----cccccccccccEEEccCCCCCCCcc----cccccccccc
Q 001494 536 SSNHVVGD----IPAELGKLSFLIKLILAQNQLSGQL----SPKLGLLVQLEHLDLSSNNLSNAIP----ESLGNLVKLH 603 (1067)
Q Consensus 536 s~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~----~~l~~l~~L~ 603 (1067)
++|.+++. ++..+..+..|++|++++|.+++.. +..+..+++|+.|+|++|.+++... ..+..+++|+
T Consensus 145 ~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~ 224 (319)
T cd00116 145 GRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLE 224 (319)
T ss_pred CCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCC
Confidence 77777632 2234455567777777777776422 2234445678888888887765433 3345567788
Q ss_pred eecccCcccccccchhhhh-----ccccceeccccccCCC----cchhhhhcccccccccccccccccc----ccccccc
Q 001494 604 YLNLSNNQFSWEIPIKLEE-----LIHLSELDLSYNFLGR----AIPSQICIMQSLEKLNLSHNSLSGV----IPRCFEE 670 (1067)
Q Consensus 604 ~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~l~~ 670 (1067)
+|++++|.+++.....+.. .+.|+.|++++|.+++ .....+..+++|+.+++++|+++.. ....+..
T Consensus 225 ~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~ 304 (319)
T cd00116 225 VLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLE 304 (319)
T ss_pred EEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhh
Confidence 8888888887654444432 2678888888888863 2334555667888888888888855 3444445
Q ss_pred C-ccccEEEcccCcC
Q 001494 671 M-HALQCIDISYNEL 684 (1067)
Q Consensus 671 l-~~L~~l~l~~N~l 684 (1067)
. +.|+.+++.+|++
T Consensus 305 ~~~~~~~~~~~~~~~ 319 (319)
T cd00116 305 PGNELESLWVKDDSF 319 (319)
T ss_pred cCCchhhcccCCCCC
Confidence 5 6788888877764
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=7.9e-20 Score=205.57 Aligned_cols=58 Identities=28% Similarity=0.249 Sum_probs=29.8
Q ss_pred cccccccccc-cccCCCccCCCcccEEEEeccCCcCc----cCCccccccccceecccccccc
Q 001494 149 NLALYSNYLE-DIIPHSLGNLTNLVTLCLYNNLLSGS----IPSEIGNLKYLLDLNLYNNELN 206 (1067)
Q Consensus 149 ~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 206 (1067)
.|+|..+.++ +..+..+..+.+|+.|+++++.++.. ++..+...++|++|+++++.+.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~ 64 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETG 64 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccC
Confidence 3555555554 22333444555666666666666421 3334444455555555555544
No 443
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.73 E-value=1.5e-17 Score=186.84 Aligned_cols=209 Identities=28% Similarity=0.478 Sum_probs=157.1
Q ss_pred HhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCe-eecCC
Q 001494 849 LTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPI-VHRDI 927 (1067)
Q Consensus 849 l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i-vHrDl 927 (1067)
|+.+.|.|+.+++|.+.++...++|.+|+..|+|.+.+.. ..-.+++.-...++++|++|++|+|+- +| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 4578899999999999999999999999999999999965 234588999999999999999999988 55 99999
Q ss_pred CCCceeeCCCCCeEEeccccceecCCC--CCccccccccccccCccccccCC-------CCccchhHHHHHHHHHHHhCC
Q 001494 928 SSKNVLLDFKNEARVSDFGIAKFLKPD--SSNWTELAGTYGYVAPELAYTMK-------VTEKCDVYSFGVLALEVIKGK 998 (1067)
Q Consensus 928 k~~Nill~~~~~~kl~DfG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwslGvil~elltg~ 998 (1067)
++.|.++|....+|++|||+....... ........-..-|.|||.+.... .+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998765421 11111222345699999887641 467899999999999999999
Q ss_pred CCCCccccccccchhhhhhhhhccC-CCCCCCCcch-H-HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhc
Q 001494 999 HPGDFISLISSSSLNLNIALDEILD-PRLPIPSHNV-Q-EKLISFVEVAISCLDESPESRPTMQKVSQLLK 1066 (1067)
Q Consensus 999 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1066 (1067)
.||+........ .+.+..+.. +.-...+... . +....+..++..||..+|.+||++++|-..++
T Consensus 156 ~~~~~~~~~~~~----~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~ 222 (484)
T KOG1023|consen 156 GPFDLRNLVEDP----DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLL 222 (484)
T ss_pred CccccccccCCh----HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence 998764432222 111111111 1111111111 1 22335889999999999999999999977654
No 444
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=2.9e-18 Score=187.82 Aligned_cols=175 Identities=24% Similarity=0.374 Sum_probs=138.6
Q ss_pred CceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccc
Q 001494 868 QHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGI 947 (1067)
Q Consensus 868 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~ 947 (1067)
.++|+.|+++...+|.+++.+.......++.....++.|++.|++| + +.+|||+||.||....+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 4689999999999999999877777788999999999999999999 6 899999999999999999999999999
Q ss_pred ceecCCCC------CccccccccccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccccccchhhhhhhhh
Q 001494 948 AKFLKPDS------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPGDFISLISSSSLNLNIALDE 1020 (1067)
Q Consensus 948 a~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1020 (1067)
........ ...+...||..||+||.+.+..|+.|+||||+|++++|+++ -..+++ .......
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-----------r~~t~~d 471 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-----------RIATLTD 471 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH-----------HHHhhhh
Confidence 98765433 24567789999999999999999999999999999999998 333322 1122233
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 001494 1021 ILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVS 1062 (1067)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl 1062 (1067)
+.+..++ +....+.+. -+.++.+++...|.+||++.++.
T Consensus 472 ~r~g~ip--~~~~~d~p~-e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 472 IRDGIIP--PEFLQDYPE-EYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hhcCCCC--hHHhhcCcH-HHHHHHHhcCCCcccCchHHHHh
Confidence 3333332 122222222 36889999999999999665543
No 445
>PRK10345 hypothetical protein; Provisional
Probab=99.71 E-value=7.9e-17 Score=165.42 Aligned_cols=138 Identities=15% Similarity=0.186 Sum_probs=105.6
Q ss_pred CCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-----CCCeeeeeeEEEeeCC---c
Q 001494 798 FDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-----RHRNIVKFYGFCSHAQ---H 869 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~ 869 (1067)
+...+.||+|+||.||. ...++.. +||++..... ...+++.+|+.+++.+ +||||++++|++.++. .
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 34567899999999996 3334444 7998865322 2346789999999999 5799999999998873 4
Q ss_pred -eeEEEEe--ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHH-HHHHhCCCCCeeecCCCCCceeeCCC----CCeE
Q 001494 870 -SFIVYEY--LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADAL-SYLHNDCFPPIVHRDISSKNVLLDFK----NEAR 941 (1067)
Q Consensus 870 -~~lv~E~--~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivHrDlk~~Nill~~~----~~~k 941 (1067)
..+|+|| +++++|.+++.+. .+++. ..++.+++.++ +|||++ +|+||||||+||+++.. +.++
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~ 149 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPV 149 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEE
Confidence 3378999 5579999999542 24444 35677888777 999999 99999999999999743 3799
Q ss_pred Eeccccce
Q 001494 942 VSDFGIAK 949 (1067)
Q Consensus 942 l~DfG~a~ 949 (1067)
|+||+-+.
T Consensus 150 LiDg~G~~ 157 (210)
T PRK10345 150 VCDNIGES 157 (210)
T ss_pred EEECCCCc
Confidence 99954443
No 446
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=6.8e-17 Score=170.50 Aligned_cols=147 Identities=18% Similarity=0.209 Sum_probs=112.3
Q ss_pred cCCCccCccccCCceeEEEEE--ECCCcEEEEEEeCCCCCCCh-----------------h----HHHHHHHHHHHHhcC
Q 001494 796 NDFDDEHCIGKGGQGSVYKVE--LASGEIIAVKKFHSPLPGEM-----------------T----FQQEFLNEVKALTEI 852 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~~~-----------------~----~~~~~~~e~~~l~~l 852 (1067)
.-|.+.+.||+|+||.||+|. ..+|+.||+|++........ . ....+..|+..++++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357888999999999999997 57899999999875421100 0 112356899999999
Q ss_pred CCC--eeeeeeEEEeeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCC-eeecCCCC
Q 001494 853 RHR--NIVKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPP-IVHRDISS 929 (1067)
Q Consensus 853 ~h~--niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivHrDlk~ 929 (1067)
.+. .+++++++ ...++||||++++++...... .......++..++.|++.++++||++ + |+||||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 753 33444432 235899999999888665422 12345566788999999999999999 8 99999999
Q ss_pred CceeeCCCCCeEEeccccceecCC
Q 001494 930 KNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 930 ~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
+||+++ ++.++++|||.|.....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccCC
Confidence 999999 88999999999976443
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=2e-16 Score=163.88 Aligned_cols=149 Identities=17% Similarity=0.143 Sum_probs=114.0
Q ss_pred HHHHHHhcCCCccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCCh-------------------hHHHHHHHHHHHH
Q 001494 789 EEIIRATNDFDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEM-------------------TFQQEFLNEVKAL 849 (1067)
Q Consensus 789 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~e~~~l 849 (1067)
.++......|...+.||+|+||.||++...+|+.||||++........ .....+..|+.++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 344444445888899999999999999888899999998764321100 0112356788888
Q ss_pred hcCCCC--eeeeeeEEEeeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCC
Q 001494 850 TEIRHR--NIVKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDI 927 (1067)
Q Consensus 850 ~~l~h~--niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDl 927 (1067)
..+.|+ .++..++ ....++||||++++++...... ....+++.+++.++.++|+. +|+||||
T Consensus 88 ~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl 151 (198)
T cd05144 88 KALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDL 151 (198)
T ss_pred HHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence 888777 4444443 2455899999999998765421 33467889999999999998 9999999
Q ss_pred CCCceeeCCCCCeEEeccccceecCC
Q 001494 928 SSKNVLLDFKNEARVSDFGIAKFLKP 953 (1067)
Q Consensus 928 k~~Nill~~~~~~kl~DfG~a~~~~~ 953 (1067)
||+||++++++.++|+|||++.....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCCC
Confidence 99999999999999999999975543
No 448
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.67 E-value=5.5e-16 Score=162.76 Aligned_cols=137 Identities=19% Similarity=0.324 Sum_probs=114.5
Q ss_pred CccccCCceeEEEEEECCCcEEEEEEeCCCCCCCh-----hHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 802 HCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEM-----TFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
+.||+|++|.||+|.. .|..|++|+......... .....+..|++++..++|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 577899998664322211 1224577899999999999998888887778889999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++|++|.+.+.... + .+..++.+++.+++++|+. +++|||++|.||+++ ++.++++|||.++.
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999885321 2 7788999999999999999 999999999999999 78999999999875
No 449
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.67 E-value=4.5e-17 Score=190.39 Aligned_cols=206 Identities=24% Similarity=0.308 Sum_probs=142.1
Q ss_pred cCCCccCccccCCceeEEEEEEC-CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
.+|+..+.+--|++|.||.++++ +.+.+|.|+-+. .-+.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq---------~lilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ---------NLILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhccccc---------chhhhc--cccccCCccee----------------
Confidence 57888999999999999999766 466788844221 111111 22222334433
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
|+-...++. .++++... +.+++|+|+. ||+|||+||+|.+|+.=|++|++|||+++.....
T Consensus 136 -----gDc~tllk~---~g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 -----GDCATLLKN---IGPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred -----chhhhhccc---CCCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 333333322 22344322 7899999999 9999999999999999999999999998743211
Q ss_pred C---------------CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhh
Q 001494 955 S---------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALD 1019 (1067)
Q Consensus 955 ~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 1019 (1067)
. ......+|||.|+|||++....|+..+|.|++|+|+||++.|+.||++.-. ++.+.
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp--------eelfg 268 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELFG 268 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH--------HHHHh
Confidence 0 001245899999999999999999999999999999999999999874322 22233
Q ss_pred hccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCC
Q 001494 1020 EILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRP 1056 (1067)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 1056 (1067)
+++......++. ......++++++.+.++.+|..|-
T Consensus 269 ~visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 269 QVISDDIEWPEE-DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhhhcccccc-CcCCCHHHHHHHHHHHHhChHhhc
Confidence 333322222222 222334588999999999999995
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.65 E-value=8.3e-16 Score=159.71 Aligned_cols=134 Identities=21% Similarity=0.339 Sum_probs=108.1
Q ss_pred ccccCCceeEEEEEECCCcEEEEEEeCCCCCCC-----hhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEec
Q 001494 803 CIGKGGQGSVYKVELASGEIIAVKKFHSPLPGE-----MTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYL 877 (1067)
Q Consensus 803 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 877 (1067)
.||+|+||.||+|.. +|..|++|+........ .....++.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 57889999865432111 112356778999999999887666666666777789999999
Q ss_pred cCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceec
Q 001494 878 EMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFL 951 (1067)
Q Consensus 878 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~ 951 (1067)
+|+++.+.+..... .++.+++.+++++|+. +++|||++|.||+++ ++.++++|||.++..
T Consensus 80 ~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGND----------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcHH----------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999988743210 7889999999999999 999999999999999 899999999998753
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=1.7e-15 Score=181.08 Aligned_cols=140 Identities=21% Similarity=0.319 Sum_probs=113.2
Q ss_pred cCCCccCccccCCceeEEEEEECCCcEEEEEEe-CCCCCC----ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCce
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELASGEIIAVKKF-HSPLPG----EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 870 (1067)
..|...++||+|+||+||++...... +++|+. ...... .....+.+.+|+++++.++|++++....++.+....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 44567899999999999999876444 444432 221111 112235688999999999999999888888887888
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++||||+++++|.+++. ....++.+++++++|||+. +++|||+||+||++ .++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999998883 3467899999999999999 99999999999999 678999999999976
Q ss_pred c
Q 001494 951 L 951 (1067)
Q Consensus 951 ~ 951 (1067)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 3
No 452
>PLN03150 hypothetical protein; Provisional
Probab=99.60 E-value=2e-15 Score=181.93 Aligned_cols=155 Identities=30% Similarity=0.432 Sum_probs=103.0
Q ss_pred hHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCcCCcceeeEEcCCCCceeeeeeecccccccccCCcCCCCCCcceEecc
Q 001494 2 EEAHALLRWKTSLQNHNNGSPLSSWTFNNVTKIGSCAWVGIHCNHGGRVNSINLTSIGLKGTLHDFSFSSFPHLAYLDLW 81 (1067)
Q Consensus 2 ~~~~all~~k~~~~~~~~~~~l~sW~~~~~~~~~~c~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~l~~L~L~ 81 (1067)
+|.+||++||+++... ...+|+++. |...+|.|.||+|+.... + ....++.|+|+
T Consensus 372 ~~~~aL~~~k~~~~~~----~~~~W~g~~-C~p~~~~w~Gv~C~~~~~-~-------------------~~~~v~~L~L~ 426 (623)
T PLN03150 372 EEVSALQTLKSSLGLP----LRFGWNGDP-CVPQQHPWSGADCQFDST-K-------------------GKWFIDGLGLD 426 (623)
T ss_pred hHHHHHHHHHHhcCCc----ccCCCCCCC-CCCcccccccceeeccCC-C-------------------CceEEEEEECC
Confidence 5889999999998532 125897532 111224799999963110 0 00124556777
Q ss_pred CCccccCCCCcccccCccceeecCCCcccCCCCcccccccccceecccccccccCCCCcccccccccccccccccccccc
Q 001494 82 SNQLFGNIPPQIGNISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDII 161 (1067)
Q Consensus 82 ~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 161 (1067)
+|.+.|.+|+.|+.|++|+.|+|++|.++|.+|..++.+++|++|+|++|+++|.+|..++++++|+.|+|++|.+++.+
T Consensus 427 ~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~i 506 (623)
T PLN03150 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506 (623)
T ss_pred CCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccC
Confidence 77777777777888888888888888887777777777888888888887777777766666666666666666666666
Q ss_pred CCCccCC-CcccEEEEeccCC
Q 001494 162 PHSLGNL-TNLVTLCLYNNLL 181 (1067)
Q Consensus 162 p~~l~~l-~~L~~L~L~~N~l 181 (1067)
|..++.+ .++..+++.+|..
T Consensus 507 P~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 507 PAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred ChHHhhccccCceEEecCCcc
Confidence 6555442 3445556665543
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.59 E-value=5.9e-15 Score=151.68 Aligned_cols=139 Identities=20% Similarity=0.247 Sum_probs=98.7
Q ss_pred cCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHH---------------------HHHHHHHHhcCCCCe--e
Q 001494 801 EHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQE---------------------FLNEVKALTEIRHRN--I 857 (1067)
Q Consensus 801 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~---------------------~~~e~~~l~~l~h~n--i 857 (1067)
.+.||+|+||+||+|...+|+.||||++............. ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999988889999999986543221111111 134555565554332 4
Q ss_pred eeeeEEEeeCCceeEEEEeccCCCHHH-HhcccCccCCCChHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCceeeC
Q 001494 858 VKFYGFCSHAQHSFIVYEYLEMGSLAM-ILSNDAAAEDLEWTQRMSVIKGIADALSYLHN-DCFPPIVHRDISSKNVLLD 935 (1067)
Q Consensus 858 v~l~~~~~~~~~~~lv~E~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDlk~~Nill~ 935 (1067)
++.+++ ...++||||++++.+.. .+.... .. .++..++.+++.++.++|. . +|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 444433 34689999999854321 111100 11 5677899999999999999 7 999999999999999
Q ss_pred CCCCeEEeccccceecC
Q 001494 936 FKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 936 ~~~~~kl~DfG~a~~~~ 952 (1067)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8999999999997654
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=1e-14 Score=144.27 Aligned_cols=135 Identities=19% Similarity=0.205 Sum_probs=113.2
Q ss_pred ccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCC--CeeeeeeEEEeeCCceeEEEEec
Q 001494 800 DEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH--RNIVKFYGFCSHAQHSFIVYEYL 877 (1067)
Q Consensus 800 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~E~~ 877 (1067)
+.+.+|+|.++.||+++..+ ..+++|....... ...+..|+..++.++| +.++++++++...+..+++|||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 35779999999999998764 7899999864322 3568899999999976 58999999888888999999999
Q ss_pred cCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 878 EMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 878 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
+++.+..+ +......++.+++++++++|....++++|+|++|+||+++..+.++++|||.++.
T Consensus 76 ~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 98766543 4466677899999999999986444799999999999999989999999999864
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.54 E-value=5.7e-14 Score=148.69 Aligned_cols=140 Identities=16% Similarity=0.253 Sum_probs=107.1
Q ss_pred ccCccc-cCCceeEEEEEECCCcEEEEEEeCCCC------CC----ChhHHHHHHHHHHHHhcCCCCee--eeeeEEEee
Q 001494 800 DEHCIG-KGGQGSVYKVELASGEIIAVKKFHSPL------PG----EMTFQQEFLNEVKALTEIRHRNI--VKFYGFCSH 866 (1067)
Q Consensus 800 ~~~~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~----~~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~ 866 (1067)
....|| .||.|+||+++.. +..++||++.... .. .......+.+|++++.+++|+++ +..+++...
T Consensus 35 ~~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 35 QARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred cCceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 346788 8999999999876 7778999885321 00 11234567889999999998774 677776543
Q ss_pred CC----ceeEEEEeccC-CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeE
Q 001494 867 AQ----HSFIVYEYLEM-GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEAR 941 (1067)
Q Consensus 867 ~~----~~~lv~E~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~k 941 (1067)
+. ..++||||+++ .+|.+++... +++.. .+.+++.++++||++ ||+||||||+|||++.++.++
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 32 23599999997 6898887432 24433 357899999999999 999999999999999999999
Q ss_pred Eeccccceec
Q 001494 942 VSDFGIAKFL 951 (1067)
Q Consensus 942 l~DfG~a~~~ 951 (1067)
|+|||.++..
T Consensus 183 LIDfg~~~~~ 192 (239)
T PRK01723 183 LIDFDRGELR 192 (239)
T ss_pred EEECCCcccC
Confidence 9999998753
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=1e-15 Score=181.35 Aligned_cols=255 Identities=21% Similarity=0.266 Sum_probs=187.9
Q ss_pred cCCCccCccccCCceeEEEEEEC--CCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCC-CCeeeeeeEEEeeCCceeE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELA--SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHAQHSFI 872 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 872 (1067)
..|...+.||+|+|+.|-.+... ....+|+|.+..+. ......+....|..+-+.+. |+|++++++...+.+..++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 45777788999999999887543 34456777665543 23334555667888888886 9999999999999999999
Q ss_pred EEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHH-hCCCCCeeecCCCCCceeeCCCC-CeEEecccccee
Q 001494 873 VYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLH-NDCFPPIVHRDISSKNVLLDFKN-EARVSDFGIAKF 950 (1067)
Q Consensus 873 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivHrDlk~~Nill~~~~-~~kl~DfG~a~~ 950 (1067)
++||..++++.+...... ....+...+.....|+..++.|+| .. ++.|||+||+|.+++..+ ..+++|||+|..
T Consensus 99 ~~~~s~g~~~f~~i~~~~-~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPD-STGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred ccCcccccccccccccCC-ccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 999999999988773211 113455667788999999999999 77 999999999999999999 999999999988
Q ss_pred cCC-CCC--ccccccc-cccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCC
Q 001494 951 LKP-DSS--NWTELAG-TYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPR 1025 (1067)
Q Consensus 951 ~~~-~~~--~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1067)
+.. .+. .....+| ++.|+|||...+. -..+..|+||.|+++.-+++|..|++.......... .+...-....
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~---~~~~~~~~~~ 251 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS---SWKSNKGRFT 251 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce---eecccccccc
Confidence 765 322 2334677 9999999998874 456789999999999999999999775443221110 0111100000
Q ss_pred CCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 001494 1026 LPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVS 1062 (1067)
Q Consensus 1026 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl 1062 (1067)
.. + +........++..+++..+|..|.+..++.
T Consensus 252 ~~-~---~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 252 QL-P---WNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred cC-c---cccCChhhhhcccccccCCchhcccccccc
Confidence 11 1 112222367788889999999999988764
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.51 E-value=1.2e-15 Score=167.02 Aligned_cols=177 Identities=35% Similarity=0.532 Sum_probs=146.2
Q ss_pred cccCccceeecCCCcccCCCCcccccccccceecccccccccCCCCccccccccccccccccccccccCCCccCCCcccE
Q 001494 94 GNISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVT 173 (1067)
Q Consensus 94 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 173 (1067)
-.|+.-...||+.|++. ++|..+..+..|+.|.|.+|.+. .+|..+++|..|.+|+|+.|+++. +|..+..|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS~-lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLSH-LPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhhc-CChhhhcCc-cee
Confidence 34666677888899888 88888888888999999998887 788888888888888888888877 566677666 888
Q ss_pred EEEeccCCcCccCCccccccccceecccccccccccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCccc
Q 001494 174 LCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKL 253 (1067)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 253 (1067)
|-+++|+++ .+|..++.+..|..|+.+.|++. .+|..++.+.+|+.|.+..|++. .+|.++..|+ |..||++.|++
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNki 223 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKI 223 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCce
Confidence 889999988 78888888888888888888888 67888888888888888888887 6777777664 77888888888
Q ss_pred ccccCccccCccceeeEEEecccccc
Q 001494 254 NGSIPHSLCNLTNLVILYIYNNSLSG 279 (1067)
Q Consensus 254 ~~~~p~~~~~l~~L~~L~L~~N~l~~ 279 (1067)
+ .+|-.|.+|+.|++|-|.+|.+..
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCCC
Confidence 7 778888888888888888888874
No 458
>PLN03150 hypothetical protein; Provisional
Probab=99.45 E-value=1.1e-13 Score=166.80 Aligned_cols=117 Identities=32% Similarity=0.512 Sum_probs=58.6
Q ss_pred cceecccCcccccccchhhhhccccceeccccccCCCcchhhhhcccccccccccccccccccccccccCccccEEEccc
Q 001494 602 LHYLNLSNNQFSWEIPIKLEELIHLSELDLSYNFLGRAIPSQICIMQSLEKLNLSHNSLSGVIPRCFEEMHALQCIDISY 681 (1067)
Q Consensus 602 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~l~l~~ 681 (1067)
++.|+|++|.++|.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|+|++.+|..+..+++|+.|++++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 34444444444444444444444444444444444444444444444444455555544444444444555555555555
Q ss_pred CcCCCCCCCCC--cccCCCcccccCCCCccCCCCCCCCcc
Q 001494 682 NELRGPIPNST--AFRDAPIKALQGNKGLCGDFKGLPSCK 719 (1067)
Q Consensus 682 N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~~~~~~~c~ 719 (1067)
|+++|.+|..- .+.......+.+|+++|+.+ +.+.|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p-~l~~C~ 538 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP-GLRACG 538 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCC-CCCCCc
Confidence 55555444321 11122234577888889864 466785
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.43 E-value=5.6e-15 Score=161.72 Aligned_cols=196 Identities=30% Similarity=0.447 Sum_probs=174.9
Q ss_pred CCCCcceEeccCCccccCCCCcccccCccceeecCCCcccCCCCcccccccccceecccccccccCCCCccccccccccc
Q 001494 71 SFPHLAYLDLWSNQLFGNIPPQIGNISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNL 150 (1067)
Q Consensus 71 ~~~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 150 (1067)
.+..-...||+.|.+. ++|..+..+..|+.|.|..|.+. .+|..+++|..|.+|||+.|+++ .+|..+..|+ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 4667788999999996 89999999999999999999999 89999999999999999999999 7888888776 9999
Q ss_pred cccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccccCCCCCcccccceeecccCcCC
Q 001494 151 ALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLF 230 (1067)
Q Consensus 151 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 230 (1067)
-+++|+++. +|..++.+..|..||.+.|++. .+|..++++.+|+.|.++.|++. .+|+.+..| .|..||+|.|++.
T Consensus 149 i~sNNkl~~-lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis 224 (722)
T KOG0532|consen 149 IVSNNKLTS-LPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS 224 (722)
T ss_pred EEecCcccc-CCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee
Confidence 999999987 7888999999999999999998 89999999999999999999998 788888865 6999999999999
Q ss_pred CCCCcccCCcccCCceEecCcccccccCccccCccc---eeeEEEeccc
Q 001494 231 GSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTN---LVILYIYNNS 276 (1067)
Q Consensus 231 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~ 276 (1067)
.+|-.|.+|+.|++|-|.+|.+. ..|..++..-. .++|+...++
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 89999999999999999999998 77777764333 3455555553
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.42 E-value=1.3e-13 Score=159.44 Aligned_cols=197 Identities=38% Similarity=0.539 Sum_probs=113.6
Q ss_pred eeecCCCcccCCCCcccccccccceecccccccccCCCCcccccc-ccccccccccccccccCCCccCCCcccEEEEecc
Q 001494 101 YLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLS-SLNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNN 179 (1067)
Q Consensus 101 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N 179 (1067)
.|+++.|.+... +..+..++.++.|++.+|.++ .+|...+.+. +|+.|++++|.+.. +|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~-l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIES-LPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchhh-hhhhhhccccccccccCCc
Confidence 466666665422 233445566666666666666 5555555553 66666666666665 3344566666666666666
Q ss_pred CCcCccCCccccccccceecccccccccccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccccCc
Q 001494 180 LLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPH 259 (1067)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 259 (1067)
+++ .+|...+.++.|+.|++++|+++ .+|..+..+..|++|.+++|++. ..+..+.++..+..|.+.+|++. .++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 666 55555556666666666666666 55555555555666666666433 34455555666666666666655 2345
Q ss_pred cccCccceeeEEEecccccccCCCccccCCcccEEEeccccccCCcc
Q 001494 260 SLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIP 306 (1067)
Q Consensus 260 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 306 (1067)
.+..+++++.|++++|.++...+ ++.+.+++.|++++|.+...+|
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 55555556666666666654322 5555555555555555554443
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.41 E-value=1.7e-13 Score=158.54 Aligned_cols=195 Identities=41% Similarity=0.529 Sum_probs=92.5
Q ss_pred eecccccccccCCCCccccccccccccccccccccccCCCccCCC-cccEEEEeccCCcCccCCccccccccceeccccc
Q 001494 125 TLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLT-NLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNN 203 (1067)
Q Consensus 125 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 203 (1067)
.|+++.|.+. .-+..+..++.++.|++.+|.++. +|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4666666653 222333444555555555555555 233334442 5555555555555 44445555555555555555
Q ss_pred ccccccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeEEEecccccccCCC
Q 001494 204 ELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPS 283 (1067)
Q Consensus 204 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 283 (1067)
+++ .+|...+.+++|+.|++++|++. .+|........|++|++++|.+. .++..+.++.++..|.+.+|++... +.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-cc
Confidence 555 34444444555555555555554 34444333444555555555322 2334444444455555555544432 33
Q ss_pred ccccCCcccEEEeccccccCCccccccCCccccEEeccCCCCcCC
Q 001494 284 EIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGL 328 (1067)
Q Consensus 284 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 328 (1067)
.++.++.++.|++++|+++...+ ++.+.++++|++++|.+...
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCcccccc
Confidence 44444444444444444443322 44444444444444444433
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.41 E-value=3.4e-12 Score=147.14 Aligned_cols=144 Identities=19% Similarity=0.261 Sum_probs=101.7
Q ss_pred cCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChh-------------------------------------HHHHHH
Q 001494 801 EHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMT-------------------------------------FQQEFL 843 (1067)
Q Consensus 801 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~~~~~~ 843 (1067)
.+.||.|++|.||+|++++|+.||||+.+........ .+-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 3689999999999999999999999998653211100 001255
Q ss_pred HHHHHHhcCC----CCeeeeeeEEE-eeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHH-HHHHHHhC
Q 001494 844 NEVKALTEIR----HRNIVKFYGFC-SHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIAD-ALSYLHND 917 (1067)
Q Consensus 844 ~e~~~l~~l~----h~niv~l~~~~-~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~~LH~~ 917 (1067)
.|++.+.+++ |..-+.+-.++ ...+..++||||++|+++.++...... .. .+.+++..++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhC
Confidence 5666655552 32223333333 234567999999999999887643211 11 23456666666 47888988
Q ss_pred CCCCeeecCCCCCceeeCCCCCeEEeccccceecC
Q 001494 918 CFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 918 ~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
|++|+|++|.||+++.++.++++|||++..+.
T Consensus 277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999997765
No 463
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=1.1e-12 Score=147.55 Aligned_cols=248 Identities=25% Similarity=0.275 Sum_probs=180.7
Q ss_pred CCCccCcccc--CCceeEEEEEE---CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCce
Q 001494 797 DFDDEHCIGK--GGQGSVYKVEL---ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 797 ~~~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 870 (1067)
.|...+.+|. |.+|.||.++. .++..+|+|+-+.+...... ...-.+|+...+.+ .|++.++....+.+.+..
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~-~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLD-SKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccc-cccccchhhcccccCccccccccCcccccCCcc
Confidence 4566788999 99999999754 57889999986655433221 12334677776677 499999999999999999
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHH----HHHHHHhCCCCCeeecCCCCCceeeCCC-CCeEEecc
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIAD----ALSYLHNDCFPPIVHRDISSKNVLLDFK-NEARVSDF 945 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivHrDlk~~Nill~~~-~~~kl~Df 945 (1067)
++-+|++. .++..+.+.. ...++....+.+..+..+ |+.++|+. +++|-|+||.||+...+ ...+++||
T Consensus 194 fiqtE~~~-~sl~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeecccc-chhHHhhhcc--cccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 99999986 5776666432 233566677777788888 99999999 99999999999999999 88999999
Q ss_pred ccceecCCCCCccc-----cccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhh
Q 001494 946 GIAKFLKPDSSNWT-----ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDE 1020 (1067)
Q Consensus 946 G~a~~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1020 (1067)
|+...+.+...... ...|...|++||...+ -++.++|+|++|.+..+..++..+...... ....+
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~---------~~W~~ 337 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN---------SSWSQ 337 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC---------CCccc
Confidence 99998876542222 2357778999998654 478899999999999999988665321100 00001
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 1021 ILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
. ....++.+.......++...+.++++.+|..|++++.++.
T Consensus 338 ~--r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 L--RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred c--ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1 1111222322233334666888999999999999988765
No 464
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=2.3e-12 Score=132.50 Aligned_cols=199 Identities=23% Similarity=0.353 Sum_probs=138.8
Q ss_pred HHhcCCCCeeeeeeEEEeeCC-----ceeEEEEeccCCCHHHHhcccCc-cCCCChHHHHHHHHHHHHHHHHHHhCCCCC
Q 001494 848 ALTEIRHRNIVKFYGFCSHAQ-----HSFIVYEYLEMGSLAMILSNDAA-AEDLEWTQRMSVIKGIADALSYLHNDCFPP 921 (1067)
Q Consensus 848 ~l~~l~h~niv~l~~~~~~~~-----~~~lv~E~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ 921 (1067)
-+-++.|.|+|+++.|+.+.. +..++.|||..|++..++++.+. ...+......+++.||..||.|||+- .|+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 344567999999999886543 56889999999999999976443 34577778889999999999999985 779
Q ss_pred eeecCCCCCceeeCCCCCeEEeccccceecCCCC-----CccccccccccccCccccccCCCCccchhHHHHHHHHHHHh
Q 001494 922 IVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDS-----SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK 996 (1067)
Q Consensus 922 ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt 996 (1067)
|+|+.+..+-|++..+|-+|+.--. -....+.. .....-.+-++|.|||+=.....+.++|||+||....||..
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~a-p~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVA-PDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred cccCCcchhheeecCCceEEecccC-ccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 9999999999999999989874211 11111100 00112235688999998666667789999999999999988
Q ss_pred CCCC-CCccccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001494 997 GKHP-GDFISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQ 1063 (1067)
Q Consensus 997 g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1063 (1067)
+..- ....+ ...........+.. .+... =++++..|++..|..||+|++++.
T Consensus 278 lEiq~tnseS-----~~~~ee~ia~~i~~-----len~l-----qr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 278 LEIQSTNSES-----KVEVEENIANVIIG-----LENGL-----QRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred heeccCCCcc-----eeehhhhhhhheee-----ccCcc-----ccCcCcccccCCCCCCcchhhhhc
Confidence 7643 21111 11112222222211 11111 146778999999999999998763
No 465
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.30 E-value=3.1e-13 Score=140.54 Aligned_cols=186 Identities=24% Similarity=0.245 Sum_probs=101.9
Q ss_pred ccccCCceeEEEcccccccCCCCCC----CCCCCCcceEeccCCccCCCCC-------------CcccCCCCCcEEEcCC
Q 001494 475 SFYIYPNLTFIDLSYNNLYGEISSD----WGRCPKLGALDFSKNNITGNIP-------------PKIGYSSQLEVLDLSS 537 (1067)
Q Consensus 475 ~~~~~~~L~~L~Ls~N~l~~~~~~~----~~~~~~L~~L~Ls~N~l~~~~~-------------~~~~~~~~L~~L~Ls~ 537 (1067)
++...|.|++||||+|-|....+.. +..+..|++|.|.+|.+.-..- ...+.-+.|+++..++
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~r 166 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGR 166 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeec
Confidence 4455677888888888776444433 2446778888888877652211 1223345677777777
Q ss_pred CcccCcCc----ccccCCCccceeecccccccCC----ccccccccccccEEEccCCCCCCCcc----ccccccccccee
Q 001494 538 NHVVGDIP----AELGKLSFLIKLILAQNQLSGQ----LSPKLGLLVQLEHLDLSSNNLSNAIP----ESLGNLVKLHYL 605 (1067)
Q Consensus 538 N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~----~~l~~l~~L~~L 605 (1067)
|++..... ..|...+.|+.+.+++|.|... ....|..++.|+.|||..|-++.... ..++.++.|+.|
T Consensus 167 Nrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El 246 (382)
T KOG1909|consen 167 NRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLREL 246 (382)
T ss_pred cccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheee
Confidence 77764322 2344456666677777666522 22345556666666666666653322 233445556666
Q ss_pred cccCcccccccchhhh-----hccccceeccccccCCCc----chhhhhccccccccccccccc
Q 001494 606 NLSNNQFSWEIPIKLE-----ELIHLSELDLSYNFLGRA----IPSQICIMQSLEKLNLSHNSL 660 (1067)
Q Consensus 606 ~Ls~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l 660 (1067)
++++|.+...+..+|. ..+.|++|.|.+|.|+.. +...+...+.|+.|+|++|++
T Consensus 247 ~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 247 NLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 6666666555444442 234555555555555431 222223344555555555555
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.29 E-value=3.3e-11 Score=140.02 Aligned_cols=146 Identities=17% Similarity=0.245 Sum_probs=96.3
Q ss_pred cCCCccCccccCCceeEEEEEECC-CcEEEEEEeCCCCCCC---------------------------h----hHHH---
Q 001494 796 NDFDDEHCIGKGGQGSVYKVELAS-GEIIAVKKFHSPLPGE---------------------------M----TFQQ--- 840 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~---------------------------~----~~~~--- 840 (1067)
.+|+. +.||.|++|+||+|++++ |+.||||+.++..... . +..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 789999999999999887 9999999997542110 0 0111
Q ss_pred ---HHHHHHHHHhcCC----CCeeeeeeEEEee-CCceeEEEEeccCCCHHHHhcccCcc---CCCChHHHHHHHHHHHH
Q 001494 841 ---EFLNEVKALTEIR----HRNIVKFYGFCSH-AQHSFIVYEYLEMGSLAMILSNDAAA---EDLEWTQRMSVIKGIAD 909 (1067)
Q Consensus 841 ---~~~~e~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~---~~l~~~~~~~i~~~i~~ 909 (1067)
++.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.++-.-.... ..+....+..++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 2445555555442 3444444444433 45678999999999997753211111 122222233333333
Q ss_pred HHHHHHhCCCCCeeecCCCCCceeeCCCC----CeEEeccccceecC
Q 001494 910 ALSYLHNDCFPPIVHRDISSKNVLLDFKN----EARVSDFGIAKFLK 952 (1067)
Q Consensus 910 ~l~~LH~~~~~~ivHrDlk~~Nill~~~~----~~kl~DfG~a~~~~ 952 (1067)
... |++|+|++|.||+++.++ .++++|||++..+.
T Consensus 277 -----f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 -----FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -----HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 345 999999999999999988 89999999998764
No 467
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.25 E-value=5.9e-11 Score=134.64 Aligned_cols=168 Identities=20% Similarity=0.276 Sum_probs=127.9
Q ss_pred EECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEeccCCCHHHHhcccCccCCC
Q 001494 816 ELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAAAEDL 895 (1067)
Q Consensus 816 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l 895 (1067)
+..++.+|.|+....... ...+...+.++.++.+|||||+++++.++.++..|+|+|.+. -|..++++ +
T Consensus 33 ~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l 101 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------L 101 (690)
T ss_pred eeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------h
Confidence 556788888888865432 234556788899999999999999999999999999999984 56666643 2
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCCccccccccccccCcccccc
Q 001494 896 EWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 975 (1067)
Q Consensus 896 ~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 975 (1067)
....+...+.||+.||.|||+.| +++|++|....|++++.|+.||++|-++..............--..|..|+.+..
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 34556667899999999999876 8999999999999999999999999988654432221111222234667765432
Q ss_pred CCCCccchhHHHHHHHHHHHhCC
Q 001494 976 MKVTEKCDVYSFGVLALEVIKGK 998 (1067)
Q Consensus 976 ~~~~~~~DvwslGvil~elltg~ 998 (1067)
.. -..|.|.||+++||++.|.
T Consensus 180 s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCcc
Confidence 22 3469999999999999993
No 468
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.21 E-value=1.5e-12 Score=135.56 Aligned_cols=186 Identities=25% Similarity=0.279 Sum_probs=142.9
Q ss_pred CCCCCCCcceEeccCCccCCCCCCcc----cCCCCCcEEEcCCCcccCcCccc-------------ccCCCccceeeccc
Q 001494 499 DWGRCPKLGALDFSKNNITGNIPPKI----GYSSQLEVLDLSSNHVVGDIPAE-------------LGKLSFLIKLILAQ 561 (1067)
Q Consensus 499 ~~~~~~~L~~L~Ls~N~l~~~~~~~~----~~~~~L~~L~Ls~N~l~~~~~~~-------------~~~l~~L~~L~L~~ 561 (1067)
++..+++|++||||.|-+....+..| ..+..|+.|.|.+|.+....... .+.-+.|+.+..++
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~r 166 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGR 166 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeec
Confidence 35667899999999999976555544 46789999999999987432222 23357899999999
Q ss_pred ccccCCc----cccccccccccEEEccCCCCCCCcc----cccccccccceecccCcccccccc----hhhhhcccccee
Q 001494 562 NQLSGQL----SPKLGLLVQLEHLDLSSNNLSNAIP----ESLGNLVKLHYLNLSNNQFSWEIP----IKLEELIHLSEL 629 (1067)
Q Consensus 562 N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~----~~l~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L 629 (1067)
|++.... ...|...+.|+.+.++.|.|....- ..|..+++|+.|||..|-++.... ..+..+++|++|
T Consensus 167 Nrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El 246 (382)
T KOG1909|consen 167 NRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLREL 246 (382)
T ss_pred cccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheee
Confidence 9987433 3456677899999999998874332 456778999999999999875544 445678899999
Q ss_pred ccccccCCCcchhhhh-----cccccccccccccccccc----cccccccCccccEEEcccCcC
Q 001494 630 DLSYNFLGRAIPSQIC-----IMQSLEKLNLSHNSLSGV----IPRCFEEMHALQCIDISYNEL 684 (1067)
Q Consensus 630 ~Ls~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~l~l~~N~l 684 (1067)
+++++.+......++. ..++|+.|.+.+|.|+-. +..+....+.|..|+|++|.+
T Consensus 247 ~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 247 NLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 9999999887666653 468999999999999833 334555689999999999988
No 469
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.20 E-value=5.6e-11 Score=119.96 Aligned_cols=131 Identities=21% Similarity=0.186 Sum_probs=95.6
Q ss_pred cCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCee-eeeeEEEeeCCceeEEEEeccC
Q 001494 801 EHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI-VKFYGFCSHAQHSFIVYEYLEM 879 (1067)
Q Consensus 801 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~~~ 879 (1067)
.+.++.|.++.||+++.. ++.|++|+....... ...+..|+++++.+.+.++ ++++.+. ....++||||++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL----LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCccc----ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCC
Confidence 356899999999999876 778999997643211 2345678888888865444 3455443 3345899999999
Q ss_pred CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCC--CCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 880 GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDC--FPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 880 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
.++.... . ....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 76 ~~l~~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred Ccccccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 8775420 1 11245678999999999982 12359999999999999 67899999998864
No 470
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.17 E-value=5.8e-12 Score=127.51 Aligned_cols=108 Identities=28% Similarity=0.277 Sum_probs=56.8
Q ss_pred cCCcccCCceEecCcccccccCccccCccceeeEEEecccccccCCCccccCCcccEEEeccccccCCccccccCCcccc
Q 001494 237 LGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIA 316 (1067)
Q Consensus 237 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 316 (1067)
+..++.|++|||++|.|+ .+..++.-++.++.|++|+|.+... +.+..+++|+.||||+|.++.. .++-..+-+++
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~-~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAEC-VGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhh-hhhHhhhcCEe
Confidence 334455666666666666 4555555566666666666666543 2355566666666666665532 33333444455
Q ss_pred EEeccCCCCcCCCCcccccCCCCCeEEecCcccc
Q 001494 317 FLFLDSNSLFGLIPSELRNLKSLSILELGNNKLC 350 (1067)
Q Consensus 317 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 350 (1067)
.|.|+.|.|... ..++.+-+|..||+++|+|.
T Consensus 356 tL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 356 TLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred eeehhhhhHhhh--hhhHhhhhheeccccccchh
Confidence 555555544432 23344444444444444443
No 471
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.15 E-value=1.9e-11 Score=120.51 Aligned_cols=126 Identities=31% Similarity=0.291 Sum_probs=43.5
Q ss_pred CCCccceeecccccccCCcccccc-ccccccEEEccCCCCCCCcccccccccccceecccCcccccccchhhhhccccce
Q 001494 550 KLSFLIKLILAQNQLSGQLSPKLG-LLVQLEHLDLSSNNLSNAIPESLGNLVKLHYLNLSNNQFSWEIPIKLEELIHLSE 628 (1067)
Q Consensus 550 ~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 628 (1067)
+...+++|+|.+|+|+.+ +.+. .+.+|+.||||+|.|+.. +.+..++.|++|++++|+|+...+.....+++|++
T Consensus 17 n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred cccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 344556666666666532 2333 456777777777777643 34666777778888888777433322245777777
Q ss_pred eccccccCCCc-chhhhhcccccccccccccccccccc---cccccCccccEEEc
Q 001494 629 LDLSYNFLGRA-IPSQICIMQSLEKLNLSHNSLSGVIP---RCFEEMHALQCIDI 679 (1067)
Q Consensus 629 L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~---~~l~~l~~L~~l~l 679 (1067)
|+|++|+|.+. ....+..+++|+.|+|.+|+++...- ..+..+|+|+.||-
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 88888777652 23556677778888888887774321 23346677776664
No 472
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.13 E-value=8.4e-10 Score=111.19 Aligned_cols=139 Identities=16% Similarity=0.218 Sum_probs=99.7
Q ss_pred CccccCCceeEEEEEECC-------CcEEEEEEeCCCCC----------CC---------hhHHHHHH----HHHHHHhc
Q 001494 802 HCIGKGGQGSVYKVELAS-------GEIIAVKKFHSPLP----------GE---------MTFQQEFL----NEVKALTE 851 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~----------~~---------~~~~~~~~----~e~~~l~~ 851 (1067)
..||.|--+.||.|...+ +..+|||+.+.... ++ ....+.+. +|++.+++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999986543 57899998753211 01 11123333 79999988
Q ss_pred CCC--CeeeeeeEEEeeCCceeEEEEeccCCCHHH-HhcccCccCCCChHHHHHHHHHHHHHHHHH-HhCCCCCeeecCC
Q 001494 852 IRH--RNIVKFYGFCSHAQHSFIVYEYLEMGSLAM-ILSNDAAAEDLEWTQRMSVIKGIADALSYL-HNDCFPPIVHRDI 927 (1067)
Q Consensus 852 l~h--~niv~l~~~~~~~~~~~lv~E~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivHrDl 927 (1067)
+.. -+++..+++ ..-++||||+.++.+.. .++. ..++..+...+..+++.++..+ |.. ++||||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 853 456666654 46689999998654321 2211 1244556677889999999999 788 9999999
Q ss_pred CCCceeeCCCCCeEEeccccceecC
Q 001494 928 SSKNVLLDFKNEARVSDFGIAKFLK 952 (1067)
Q Consensus 928 k~~Nill~~~~~~kl~DfG~a~~~~ 952 (1067)
++.||+++ ++.++++|||.|....
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 5789999999997654
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.13 E-value=7.7e-12 Score=144.73 Aligned_cols=247 Identities=32% Similarity=0.350 Sum_probs=143.4
Q ss_pred cccCccceeecCCCcccCCCCcccccccccceecccccccccCCCCccccccccccccccccccccccCCCccCCCcccE
Q 001494 94 GNISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVT 173 (1067)
Q Consensus 94 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 173 (1067)
..+..++.+++..|.+.. +-..++.+++|+.|++.+|+|. .+...+..+++|++|+|++|.|+.+. .+..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhh
Confidence 344555555566666552 2233555666666666666665 33333555666666666666666653 2555666777
Q ss_pred EEEeccCCcCccCCccccccccceecccccccccccCCC-CCcccccceeecccCcCCCCCCcccCCcccCCceEecCcc
Q 001494 174 LCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIPQS-LGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNK 252 (1067)
Q Consensus 174 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 252 (1067)
|++++|.++ .+ ..+..++.|+.+++++|+++..-+ . ...+.+|+.+++..|.+.. ...+..+..+..+++..|+
T Consensus 145 L~l~~N~i~-~~-~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLIS-DI-SGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcch-hc-cCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchhc--ccchHHHHHHHHhhccccc
Confidence 777777766 22 334456677777777777663322 1 4566667777777776652 2334444555555667776
Q ss_pred cccccCccccCcc--ceeeEEEecccccccCCCccccCCcccEEEeccccccCCccccccCCccccEEeccCCCCcCC--
Q 001494 253 LNGSIPHSLCNLT--NLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGL-- 328 (1067)
Q Consensus 253 l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-- 328 (1067)
++..-+ +..+. .|+.+++++|++... +..+..+..+..|+++.|++... ..+.....+..+....|.+...
T Consensus 220 i~~~~~--l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 294 (414)
T KOG0531|consen 220 ISKLEG--LNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEA 294 (414)
T ss_pred ceeccC--cccchhHHHHHHhcccCccccc-cccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhh
Confidence 663222 12222 267777777777632 35566667777777777777654 3344555666667777766522
Q ss_pred -CCcc-cccCCCCCeEEecCccccccCC
Q 001494 329 -IPSE-LRNLKSLSILELGNNKLCGSIP 354 (1067)
Q Consensus 329 -~p~~-~~~l~~L~~L~L~~N~l~~~~~ 354 (1067)
.... .+....++.+.+..|.+....+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 295 ISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hhccccccccccccccccccCccccccc
Confidence 1111 4456677788888888775544
No 474
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.12 E-value=4e-11 Score=135.25 Aligned_cols=246 Identities=21% Similarity=0.186 Sum_probs=176.0
Q ss_pred HhcCCCccCccccCCceeEEEEEE--CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcC-CCCeeeeeeEEEeeCCce
Q 001494 794 ATNDFDDEHCIGKGGQGSVYKVEL--ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHAQHS 870 (1067)
Q Consensus 794 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 870 (1067)
...+|..+..||.|.|+.||++.. .++..|++|............ ..-..|+.+...+ .|.++++....+......
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-IFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-hcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 346788999999999999999743 468889999987665443322 2224566666666 599999988888888888
Q ss_pred eEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCC-CCeEEeccccce
Q 001494 871 FIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFK-NEARVSDFGIAK 949 (1067)
Q Consensus 871 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~-~~~kl~DfG~a~ 949 (1067)
|+--||+++++..... .....+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||.++
T Consensus 342 ~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred cCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccc
Confidence 8999999999887665 2233467778889999999999999998 99999999999999886 788999999987
Q ss_pred ecCCCCCcccccccccccc--CccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCC
Q 001494 950 FLKPDSSNWTELAGTYGYV--APELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDFISLISSSSLNLNIALDEILDPRLP 1027 (1067)
Q Consensus 950 ~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1067)
.+.- .......+-+++ +|+......+..+.|++|||.-+.|.++|..--... .....+.....+
T Consensus 416 ~~~~---~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-----------~~~~~i~~~~~p 481 (524)
T KOG0601|consen 416 RLAF---SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-----------VQSLTIRSGDTP 481 (524)
T ss_pred ccce---ecccccccccccccchhhccccccccccccccccccccccccCcccCccc-----------ccceeeeccccc
Confidence 4221 111122333344 566666677889999999999999999986531100 001111222222
Q ss_pred CCCcchHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001494 1028 IPSHNVQEKLISFVEVAISCLDESPESRPTMQKVSQL 1064 (1067)
Q Consensus 1028 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1064 (1067)
...... .++..+...+...++..||.+.++...
T Consensus 482 ~~~~~~----~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 482 NLPGLK----LQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred CCCchH----HhhhhhhhhhcCCccccchhhhhhccc
Confidence 221111 346777788999999999998877543
No 475
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.12 E-value=1e-11 Score=125.83 Aligned_cols=130 Identities=28% Similarity=0.300 Sum_probs=58.6
Q ss_pred cccccceecccccccccccCCCCCcccccceeecccCcCCCCCCcccCCcccCCceEecCcccccccCccccCccceeeE
Q 001494 191 NLKYLLDLNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSELGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVIL 270 (1067)
Q Consensus 191 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 270 (1067)
.-+.|++|+|++|.|+ .+.++..-++.++.|++|+|.+.. + +.+..+++|+.|||++|.++ .+.++-..|.+.+.|
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 3344555555555554 444444444555555555555541 1 12444455555555555554 333333344455555
Q ss_pred EEecccccccCCCccccCCcccEEEeccccccCCc-cccccCCccccEEeccCCCCc
Q 001494 271 YIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLI-PHSLGNLSNIAFLFLDSNSLF 326 (1067)
Q Consensus 271 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~ 326 (1067)
.|+.|.+..+ ..++.+.+|..||+++|+|.... -..+++++.|+++.|.+|.+.
T Consensus 358 ~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 358 KLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred ehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 5555554432 23444444455555555444321 123334444444444444433
No 476
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.12 E-value=7.6e-12 Score=144.78 Aligned_cols=247 Identities=32% Similarity=0.391 Sum_probs=167.6
Q ss_pred ccccccceecccccccccCCCCccccccccccccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccce
Q 001494 118 GHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLD 197 (1067)
Q Consensus 118 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 197 (1067)
..+..++.+++..|.+. .+-..+..+.+|+.|++..|.|+.+. ..+..+++|++|++++|.|+.. ..+..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhcc-cchhhhhcchheeccccccccc--cchhhccchhh
Confidence 45677777778888776 34445777888888888888887742 2267788888888888888743 23566677888
Q ss_pred ecccccccccccCCCCCcccccceeecccCcCCCCCCcc-cCCcccCCceEecCcccccccCccccCccceeeEEEeccc
Q 001494 198 LNLYNNELNGSIPQSLGNLSNLAMLNLSSNSLFGSIPSE-LGNLKYLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNS 276 (1067)
Q Consensus 198 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 276 (1067)
|++++|.|+. + ..+..+.+|+.+++++|++...-+ . ...+.+|+.+++.+|.+.. ...+..+..+..+++..|.
T Consensus 145 L~l~~N~i~~-~-~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISD-I-SGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchh-c-cCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchhc--ccchHHHHHHHHhhccccc
Confidence 8888888873 2 346667888888888888874433 2 4667778888888888862 3345555666666888888
Q ss_pred ccccCCCccccCCc--ccEEEeccccccCCccccccCCccccEEeccCCCCcCCCCcccccCCCCCeEEecCcccccc--
Q 001494 277 LSGLIPSEIGNLKF--LSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNSLFGLIPSELRNLKSLSILELGNNKLCGS-- 352 (1067)
Q Consensus 277 l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-- 352 (1067)
++..- .+..+.. |+.+++++|.+... +..+..+.++..|++.+|++... ..+.....+..+.+..|++...
T Consensus 220 i~~~~--~l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 294 (414)
T KOG0531|consen 220 ISKLE--GLNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEA 294 (414)
T ss_pred ceecc--CcccchhHHHHHHhcccCccccc-cccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhh
Confidence 87542 2223333 78888888888743 35667777888888888887765 3344556667777777776522
Q ss_pred -CCcc-ccCCCCCCeEEccCCcCccccC
Q 001494 353 -IPHF-LGNLTNLSVLFIYNNSLSGSIP 378 (1067)
Q Consensus 353 -~~~~-~~~l~~L~~L~l~~N~l~~~~p 378 (1067)
.... ......++...+..|.+....+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 295 ISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hhccccccccccccccccccCccccccc
Confidence 1111 4556677777887777765433
No 477
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.11 E-value=2.9e-09 Score=113.71 Aligned_cols=255 Identities=18% Similarity=0.254 Sum_probs=161.9
Q ss_pred CccCccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhc-CCCCeeeeeeEE------EeeC-Cce
Q 001494 799 DDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTE-IRHRNIVKFYGF------CSHA-QHS 870 (1067)
Q Consensus 799 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~------~~~~-~~~ 870 (1067)
..++.||+|+.+.+|...-- +. .+.|++..+.... .. +.+..|.. -.||-+-.-+.| ..++ ...
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa~---~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPAA---QA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCCccccCCccceeeecchh-hc-hhheeecCCCchH---HH---HHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 45688999999999974222 12 2457777654322 11 12223333 357654442222 1122 236
Q ss_pred eEEEEeccCC-CHHHHhc---ccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccc
Q 001494 871 FIVYEYLEMG-SLAMILS---NDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFG 946 (1067)
Q Consensus 871 ~lv~E~~~~g-~L~~~l~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG 946 (1067)
.++|..+++. -..++++ +........|...+++++.++.+.+.||++ |.+-+|+.++|+|+++++.+.+.|-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccc
Confidence 7888888754 2333332 222334578999999999999999999999 99999999999999999999998866
Q ss_pred cceecCCCCCccccccccccccCccccc-----cCCCCccchhHHHHHHHHHHHhC-CCCCCccccccccchhhhhhh--
Q 001494 947 IAKFLKPDSSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKG-KHPGDFISLISSSSLNLNIAL-- 1018 (1067)
Q Consensus 947 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg-~~p~~~~~~~~~~~~~~~~~~-- 1018 (1067)
.-.. ...+......+|.+.|.+||.-. +...+...|-|.+||++++++.| ++||.++..........+..+
T Consensus 163 sfqi-~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 163 SFQI-NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred ceee-ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 4432 23444556678899999999644 33457789999999999999986 999987665433222222111
Q ss_pred ------hhccCCCCCCCCcc-hHHHHHHHHHHHHhccCC--CCCCCCCHHHHHHHh
Q 001494 1019 ------DEILDPRLPIPSHN-VQEKLISFVEVAISCLDE--SPESRPTMQKVSQLL 1065 (1067)
Q Consensus 1019 ------~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~--dP~~Rpt~~evl~~L 1065 (1067)
.+...+..+.|... .......+..+..+|+.. .|+-|||++..+..|
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl 297 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAAL 297 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Confidence 11111111111111 111223466677788865 377999999887655
No 478
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=9.3e-12 Score=133.07 Aligned_cols=137 Identities=28% Similarity=0.237 Sum_probs=58.7
Q ss_pred ccCCceeEEEcccccccCC--CCCCCCCCCCcceEeccCCccCCCCCCcc-cCCCCCcEEEcCCCcccCcCc-ccccCCC
Q 001494 477 YIYPNLTFIDLSYNNLYGE--ISSDWGRCPKLGALDFSKNNITGNIPPKI-GYSSQLEVLDLSSNHVVGDIP-AELGKLS 552 (1067)
Q Consensus 477 ~~~~~L~~L~Ls~N~l~~~--~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~-~~~~~l~ 552 (1067)
..+++++.||||.|-|+.- +..-...+|+|+.|+++.|++.....+.. ..+++|+.|.|+.+.++.... ..+..++
T Consensus 143 k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fP 222 (505)
T KOG3207|consen 143 KILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFP 222 (505)
T ss_pred hhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCC
Confidence 3455555555555544421 11122345555555555555542211111 133455555555555542111 1122345
Q ss_pred ccceeecccccccCCccccccccccccEEEccCCCCCCCc-ccccccccccceecccCcccc
Q 001494 553 FLIKLILAQNQLSGQLSPKLGLLVQLEHLDLSSNNLSNAI-PESLGNLVKLHYLNLSNNQFS 613 (1067)
Q Consensus 553 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~l~~l~~L~~L~Ls~N~l~ 613 (1067)
+|..|+|..|..-.+-......+..|+.|||++|++-+.. -...+.++.|+.|+++.+.++
T Consensus 223 sl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 223 SLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred cHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcc
Confidence 5555555555322222223334445555555555443211 122334455555555555443
No 479
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=1.4e-11 Score=131.72 Aligned_cols=158 Identities=27% Similarity=0.169 Sum_probs=71.4
Q ss_pred CCceeEEEcccccccCCCC-CCCCCCCCcceEeccCCccCCC--CCCcccCCCCCcEEEcCCCcccCcCccc-ccCCCcc
Q 001494 479 YPNLTFIDLSYNNLYGEIS-SDWGRCPKLGALDFSKNNITGN--IPPKIGYSSQLEVLDLSSNHVVGDIPAE-LGKLSFL 554 (1067)
Q Consensus 479 ~~~L~~L~Ls~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~--~~~~~~~~~~L~~L~Ls~N~l~~~~~~~-~~~l~~L 554 (1067)
+..|+.+.|.+..+..... +....|+.++.||||+|-+... +......+++|+.|+|+.|++....... -..+++|
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~l 199 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHL 199 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhh
Confidence 4455666666655543222 3445677777777777766521 1222345667777777777765211111 1124455
Q ss_pred ceeecccccccC-CccccccccccccEEEccCCCCCCCcccccccccccceecccCcccccccc-hhhhhccccceeccc
Q 001494 555 IKLILAQNQLSG-QLSPKLGLLVQLEHLDLSSNNLSNAIPESLGNLVKLHYLNLSNNQFSWEIP-IKLEELIHLSELDLS 632 (1067)
Q Consensus 555 ~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls 632 (1067)
+.|.++.|.++. .+...+..+++|+.|+|..|..-..-.....-+..|+.|||++|++..... ...+.++.|+.|+++
T Consensus 200 K~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls 279 (505)
T KOG3207|consen 200 KQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLS 279 (505)
T ss_pred heEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhcc
Confidence 555555555441 111222334455555555543111111122223444444444444432110 122334444444444
Q ss_pred cccC
Q 001494 633 YNFL 636 (1067)
Q Consensus 633 ~N~l 636 (1067)
.+.|
T Consensus 280 ~tgi 283 (505)
T KOG3207|consen 280 STGI 283 (505)
T ss_pred ccCc
Confidence 4444
No 480
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.9e-09 Score=103.88 Aligned_cols=134 Identities=22% Similarity=0.337 Sum_probs=101.6
Q ss_pred CccccCCceeEEEEEECCCcEEEEEEe-CCCCCC----ChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEEEe
Q 001494 802 HCIGKGGQGSVYKVELASGEIIAVKKF-HSPLPG----EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVYEY 876 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 876 (1067)
..+++|+-+.+|.+.+. |.++.+|.- .+.... ..-......+|++++.+++--.|..-+-+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45789999999999775 444555543 222211 112234567899999988766776666677788888999999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEecccccee
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKF 950 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~ 950 (1067)
++|..+.+.+... ...++..+-.-+.-||.. ||+|+|+.++||++..++ +.++|||++..
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888433 245677888888999999 999999999999998654 99999999964
No 481
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=1.5e-10 Score=114.14 Aligned_cols=105 Identities=28% Similarity=0.380 Sum_probs=24.0
Q ss_pred CCCCeEEccCCcCccccCcccC-CCCCCCEEEccCCcccccCCCccccccCCcEEEcccCcCcccCchhhhCcCCCcEEe
Q 001494 361 TNLSVLFIYNNSLSGSIPCEIG-NLKSLSYLNLAFNKLTSSIPISLSNLTNLSVLSFYKNSLSGAIPKEYRNLVKLTKLF 439 (1067)
Q Consensus 361 ~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 439 (1067)
..+++|+|++|.|+. + +.++ .+.+|+.|+|++|.|+.. ..+..++.|++|++++|+|+...+.....+++|+.|+
T Consensus 19 ~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 19 VKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 344555555555542 2 1233 345555555555555532 1344555555555555555533222223455566666
Q ss_pred CCCCcccCC--CCCCCCCCcccEEeccCcccc
Q 001494 440 LGDNQFQGP--IPNLKNLTSLVRVHLDRNYLT 469 (1067)
Q Consensus 440 L~~N~l~~~--~~~l~~l~~L~~L~L~~N~l~ 469 (1067)
|++|+|... ...+..+++|+.|+|.+|.++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 666655432 112333444444444444443
No 482
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.04 E-value=1.3e-09 Score=115.36 Aligned_cols=143 Identities=20% Similarity=0.272 Sum_probs=110.2
Q ss_pred CccccCCceeEEEEEECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCC--CeeeeeeEEEeeC---CceeEEEEe
Q 001494 802 HCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH--RNIVKFYGFCSHA---QHSFIVYEY 876 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~---~~~~lv~E~ 876 (1067)
+.+|.|.++.||+++..+|+.+++|+....... .....+..|+++++.+++ ..+++++.+.... +..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 568999999999998877789999997654321 123567889999999865 4467777777654 367899999
Q ss_pred ccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 001494 877 LEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDC-------------------------------------- 918 (1067)
Q Consensus 877 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 918 (1067)
++|.++.+.+.. ..++..++..++.++++++++||+..
T Consensus 82 i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 82 VDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred eCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 999888765421 24677778888889999999998531
Q ss_pred ---------------CCCeeecCCCCCceeeCC--CCCeEEecccccee
Q 001494 919 ---------------FPPIVHRDISSKNVLLDF--KNEARVSDFGIAKF 950 (1067)
Q Consensus 919 ---------------~~~ivHrDlk~~Nill~~--~~~~kl~DfG~a~~ 950 (1067)
...++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 56689999998864
No 483
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.02 E-value=1.8e-09 Score=103.18 Aligned_cols=146 Identities=18% Similarity=0.270 Sum_probs=106.3
Q ss_pred ccCccccCCceeEEEEEECCCcEEEEEEeC-----CCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 800 DEHCIGKGGQGSVYKVELASGEIIAVKKFH-----SPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 800 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~-----~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
....+-||+-+.|+++.+. |+...||.-. .+..+..-..+...+|++.+.+++--.|..-.-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4567889999999998877 7766666432 222222223456788999998887555555555566666778999
Q ss_pred EeccC-CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCC---eEEecccccee
Q 001494 875 EYLEM-GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNE---ARVSDFGIAKF 950 (1067)
Q Consensus 875 E~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~---~kl~DfG~a~~ 950 (1067)
||++| .++.+++......+. ..+....++..|-+.+.-||.. +|+|+|+..+||++..++. +.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 477777754433332 2233367889999999999999 9999999999999987764 58999999854
No 484
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.01 E-value=9.4e-11 Score=138.35 Aligned_cols=249 Identities=21% Similarity=0.251 Sum_probs=167.9
Q ss_pred cCCCccCccccCCceeEEEEEE-CCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEeeCCceeEEE
Q 001494 796 NDFDDEHCIGKGGQGSVYKVEL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHAQHSFIVY 874 (1067)
Q Consensus 796 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 874 (1067)
+.+...+-+-.|+++.++.++- ..|...++|.......-.....+....+-.+.-..++|-++...--+......++|+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~ 883 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG 883 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence 4566667888999999998743 345444555443211111111122222222322334577776555455567889999
Q ss_pred EeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCC
Q 001494 875 EYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPD 954 (1067)
Q Consensus 875 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~ 954 (1067)
+|..++++...++.... .+.+.+......+..+.+|||.. .+.|||++|.|.+..++++.+++|||.....+-.
T Consensus 884 ~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 884 HYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred HHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccc
Confidence 99999999988865442 34444555677888999999998 7999999999999999999999999843321100
Q ss_pred ----------C---------------------CccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001494 955 ----------S---------------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPGDF 1003 (1067)
Q Consensus 955 ----------~---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~ 1003 (1067)
. .......||+.|.|||...+.....++|.|+.|++++|.++|..||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 0 001235689999999999999999999999999999999999999864
Q ss_pred cccccccchhhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhccCCCCCCCCCHH
Q 001494 1004 ISLISSSSLNLNIALDEILDPRLPIPSHNVQEKLISFVEVAISCLDESPESRPTMQ 1059 (1067)
Q Consensus 1004 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ 1059 (1067)
... ...++.+.....+.+. ...+....+.+++...+..+|.+|-.|.
T Consensus 1038 ~tp--------q~~f~ni~~~~~~~p~-g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETP--------QQIFENILNRDIPWPE-GPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cch--------hhhhhccccCCCCCCC-CccccChhhhhhhhhhhccCchhccCcc
Confidence 332 2333444433333221 1223334577888889999999997765
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.98 E-value=2.9e-10 Score=139.84 Aligned_cols=85 Identities=32% Similarity=0.367 Sum_probs=40.7
Q ss_pred ccccCccceeecCCCcccCCCCcccccccccceecccccccccCCCCccccccccccccccccccccccCCCccCCCccc
Q 001494 93 IGNISKLKYLDLSSNLFSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSLNNLALYSNYLEDIIPHSLGNLTNLV 172 (1067)
Q Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 172 (1067)
|..++.|++||||+|.=-+.+|.+|++|-+||+|+|++..++ .+|..+++|..|.+|++..+.-...+|..+..|++|+
T Consensus 567 f~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr 645 (889)
T KOG4658|consen 567 FRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLR 645 (889)
T ss_pred HhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhccccc
Confidence 344555555555544433344555555555555555555444 4455555555555555544443333344444455555
Q ss_pred EEEEec
Q 001494 173 TLCLYN 178 (1067)
Q Consensus 173 ~L~L~~ 178 (1067)
+|.+..
T Consensus 646 ~L~l~~ 651 (889)
T KOG4658|consen 646 VLRLPR 651 (889)
T ss_pred EEEeec
Confidence 555443
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.96 E-value=3.5e-10 Score=139.23 Aligned_cols=205 Identities=26% Similarity=0.295 Sum_probs=141.1
Q ss_pred CCCCCcceEeccCCccccCCCCcccccCccceeecCCCc--ccCCCCcccccccccceecccccccccCCCCcccccccc
Q 001494 70 SSFPHLAYLDLWSNQLFGNIPPQIGNISKLKYLDLSSNL--FSGAIPPQIGHLSYLKTLHLFKNQLSGSIPLEVGGLSSL 147 (1067)
Q Consensus 70 ~~~~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~--l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 147 (1067)
.+....+...+-+|.+. .++....+ ++|++|-+.+|. +....+..|..++.|++|||++|.=-+.+|..+++|-+|
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~L 597 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHL 597 (889)
T ss_pred cchhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhh
Confidence 34456677777777775 44444433 379999999986 553444457889999999999988777999999999999
Q ss_pred ccccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccc--cccccCCCCCcccccceeecc
Q 001494 148 NNLALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNE--LNGSIPQSLGNLSNLAMLNLS 225 (1067)
Q Consensus 148 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~--l~~~~p~~l~~l~~L~~L~Ls 225 (1067)
++|+|+...+.. +|..+++|..|.+|++..+.-...+|..+..|++|++|.+..-. .....-..+.++.+|+.+...
T Consensus 598 ryL~L~~t~I~~-LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 598 RYLDLSDTGISH-LPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred hcccccCCCccc-cchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheee
Confidence 999999999986 88899999999999999987666777777789999999986543 222333445566666666554
Q ss_pred cCcCCCCCCcccCCcccCC----ceEecCcccccccCccccCccceeeEEEeccccccc
Q 001494 226 SNSLFGSIPSELGNLKYLS----DLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGL 280 (1067)
Q Consensus 226 ~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 280 (1067)
.... .+-..+..+..|. .+.+..+... ..+.++..+.+|+.|.+.++.++..
T Consensus 677 ~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~ 732 (889)
T KOG4658|consen 677 ISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEI 732 (889)
T ss_pred cchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchh
Confidence 4332 1111222333332 3333232322 4556677778888888888877643
No 487
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.83 E-value=2.5e-09 Score=79.11 Aligned_cols=41 Identities=37% Similarity=0.814 Sum_probs=29.3
Q ss_pred hHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCcCCcceeeEEcC
Q 001494 2 EEAHALLRWKTSLQNHNNGSPLSSWTFNNVTKIGSCAWVGIHCN 45 (1067)
Q Consensus 2 ~~~~all~~k~~~~~~~~~~~l~sW~~~~~~~~~~c~w~gv~C~ 45 (1067)
+|++|||+||+++..++ ...+++|+.+. ..+||.|.||+|+
T Consensus 3 ~d~~aLl~~k~~l~~~~-~~~l~~W~~~~--~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 3 QDRQALLAFKKSLNNDP-SGVLSSWNPSS--DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHCTT-SC--CCCTT--TT----S-CCCSTTEEE-
T ss_pred HHHHHHHHHHHhccccc-CcccccCCCcC--CCCCeeeccEEeC
Confidence 69999999999998654 45899998642 2689999999996
No 488
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.79 E-value=4.1e-08 Score=98.79 Aligned_cols=129 Identities=26% Similarity=0.332 Sum_probs=84.4
Q ss_pred eEEEEEECCCcEEEEEEeCCCCCC-----------------------ChhHHHHHHHHHHHHhcCCCC--eeeeeeEEEe
Q 001494 811 SVYKVELASGEIIAVKKFHSPLPG-----------------------EMTFQQEFLNEVKALTEIRHR--NIVKFYGFCS 865 (1067)
Q Consensus 811 ~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 865 (1067)
.||.|...+|..+|||+.+..... .........+|++.|.++..- ++++.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 489999889999999988542110 011123467899999999755 466666542
Q ss_pred eCCceeEEEEecc--CCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHH-HHhCCCCCeeecCCCCCceeeCCCCCeEE
Q 001494 866 HAQHSFIVYEYLE--MGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSY-LHNDCFPPIVHRDISSKNVLLDFKNEARV 942 (1067)
Q Consensus 866 ~~~~~~lv~E~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivHrDlk~~Nill~~~~~~kl 942 (1067)
.-.+||||++ |..+..+.... ++......++.+++..+.. +|.. ||+|+|+.+.||+++++ .+.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 3479999998 55554433211 1134456678888886666 4677 99999999999999877 9999
Q ss_pred eccccceecC
Q 001494 943 SDFGIAKFLK 952 (1067)
Q Consensus 943 ~DfG~a~~~~ 952 (1067)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999997654
No 489
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.73 E-value=1.3e-07 Score=101.13 Aligned_cols=144 Identities=22% Similarity=0.171 Sum_probs=99.2
Q ss_pred CccccCCceeEEEEEECCCcEEEEEEeCCCCCCCh--------hHHHHHHHHHHHHhcCCCCe--eeeeeEEEee-----
Q 001494 802 HCIGKGGQGSVYKVELASGEIIAVKKFHSPLPGEM--------TFQQEFLNEVKALTEIRHRN--IVKFYGFCSH----- 866 (1067)
Q Consensus 802 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--------~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~----- 866 (1067)
+.+-......|++++.. |+.|.||+.....-.+. .....+.+|...+.++...+ ++..+++++.
T Consensus 28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 44444444556677664 78899997743221000 00113678888888774333 3344555543
Q ss_pred CCceeEEEEeccCC-CHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC-------CC
Q 001494 867 AQHSFIVYEYLEMG-SLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF-------KN 938 (1067)
Q Consensus 867 ~~~~~lv~E~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~-------~~ 938 (1067)
....++|||++++. ++.+++.... ..+.+...+..++.+++..++-||+. ||+|+|++++|||++. ++
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCc
Confidence 23578999999986 8888874321 23345667778999999999999999 9999999999999985 46
Q ss_pred CeEEecccccee
Q 001494 939 EARVSDFGIAKF 950 (1067)
Q Consensus 939 ~~kl~DfG~a~~ 950 (1067)
.+.++||+.++.
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 789999998864
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.72 E-value=1.4e-08 Score=82.38 Aligned_cols=59 Identities=34% Similarity=0.528 Sum_probs=26.8
Q ss_pred ceeeEEEecccccccCCCccccCCcccEEEeccccccCCccccccCCccccEEeccCCC
Q 001494 266 NLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKFSGLIPHSLGNLSNIAFLFLDSNS 324 (1067)
Q Consensus 266 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 324 (1067)
+|++|++++|+++.+.+..|.++++|++|++++|+++.+.|.+|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444444444444444444444444444444444444444444444443
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.67 E-value=2.1e-08 Score=81.21 Aligned_cols=60 Identities=38% Similarity=0.516 Sum_probs=37.7
Q ss_pred cCCceEecCcccccccCccccCccceeeEEEecccccccCCCccccCCcccEEEeccccc
Q 001494 242 YLSDLKLADNKLNGSIPHSLCNLTNLVILYIYNNSLSGLIPSEIGNLKFLSKIALSYNKF 301 (1067)
Q Consensus 242 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 301 (1067)
+|++|++++|+++...+..|.++++|++|++++|+++.+.|..|.++++|+.|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455666666666644445666666666666666666666666666666666666666654
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.60 E-value=1.3e-09 Score=123.17 Aligned_cols=203 Identities=23% Similarity=0.152 Sum_probs=124.3
Q ss_pred CCceeEEEcccccccCCC-CCCCCCCCCcceEeccCCccCCCCCCcccCCCCCcEEEcCCCccc---CcCcccccC----
Q 001494 479 YPNLTFIDLSYNNLYGEI-SSDWGRCPKLGALDFSKNNITGNIPPKIGYSSQLEVLDLSSNHVV---GDIPAELGK---- 550 (1067)
Q Consensus 479 ~~~L~~L~Ls~N~l~~~~-~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~---~~~~~~~~~---- 550 (1067)
++.++.|.+-.-.=.+.- |-.+..+.+|+.|.|.++.|.. .-....--.+|++|-. +|.+. ..+....+.
T Consensus 83 lqkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~-~~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns 160 (1096)
T KOG1859|consen 83 LQKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLST-AKGLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNS 160 (1096)
T ss_pred HhhheeeeecccCCCCCCCCceeccccceeeEEecCcchhh-hhhhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccc
Confidence 444555554433222221 5556777899999999998863 1111112235665533 23332 111111111
Q ss_pred --CCccceeecccccccCCccccccccccccEEEccCCCCCCCcccccccccccceecccCcccccccchhhhhccccce
Q 001494 551 --LSFLIKLILAQNQLSGQLSPKLGLLVQLEHLDLSSNNLSNAIPESLGNLVKLHYLNLSNNQFSWEIPIKLEELIHLSE 628 (1067)
Q Consensus 551 --l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 628 (1067)
.-.|...+.++|.+. .....+.-++.|++||||+|+++.. +.+..+++|+.|||++|.++...--...++. |+.
T Consensus 161 ~~Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~ 236 (1096)
T KOG1859|consen 161 PVWNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQL 236 (1096)
T ss_pred hhhhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-hee
Confidence 235667778888876 4455677778888888888888754 3677788888888888888743333334444 888
Q ss_pred eccccccCCCcchhhhhcccccccccccccccccccc-cccccCccccEEEcccCcCCCCCC
Q 001494 629 LDLSYNFLGRAIPSQICIMQSLEKLNLSHNSLSGVIP-RCFEEMHALQCIDISYNELRGPIP 689 (1067)
Q Consensus 629 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~l~l~~N~l~~~~~ 689 (1067)
|.|++|.++. ...+.++++|+.||||.|-|++.-- .-+..+..|+.|+|.||++.+..-
T Consensus 237 L~lrnN~l~t--L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p~ 296 (1096)
T KOG1859|consen 237 LNLRNNALTT--LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAPW 296 (1096)
T ss_pred eeecccHHHh--hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCHH
Confidence 8888888754 2345667888888888888764322 234466777888888888876433
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.57 E-value=4.1e-07 Score=93.44 Aligned_cols=139 Identities=22% Similarity=0.214 Sum_probs=98.6
Q ss_pred CCccCccccCCceeEEEEEECCCcEEEEEEeCCCC-----------------CCCh--hHHHHHHHHHHHHhcCCCC--e
Q 001494 798 FDDEHCIGKGGQGSVYKVELASGEIIAVKKFHSPL-----------------PGEM--TFQQEFLNEVKALTEIRHR--N 856 (1067)
Q Consensus 798 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------------~~~~--~~~~~~~~e~~~l~~l~h~--n 856 (1067)
..++.+||.|--+.||.|....|.++|||.=+... ..++ .......+|.++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45678999999999999999999999999643211 0010 1123356788899888544 6
Q ss_pred eeeeeEEEeeCCceeEEEEeccCCCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCC
Q 001494 857 IVKFYGFCSHAQHSFIVYEYLEMGSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDF 936 (1067)
Q Consensus 857 iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~ 936 (1067)
|++.+++ +...+||||++|-.|...- ++.+..-.++..|+.-+...-.. ||||+|+.+-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 7777653 4567999999986554322 12333444555555555555566 9999999999999999
Q ss_pred CCCeEEeccccceec
Q 001494 937 KNEARVSDFGIAKFL 951 (1067)
Q Consensus 937 ~~~~kl~DfG~a~~~ 951 (1067)
+|.+.++||-.+...
T Consensus 238 dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 238 DGDIVVIDWPQAVPI 252 (304)
T ss_pred CCCEEEEeCcccccC
Confidence 999999999877543
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.56 E-value=2.2e-09 Score=121.44 Aligned_cols=128 Identities=34% Similarity=0.364 Sum_probs=92.5
Q ss_pred CCcEEEcCCCcccCcCcccccCCCccceeecccccccCCccccccccccccEEEccCCCCCCCcccccccccccceeccc
Q 001494 529 QLEVLDLSSNHVVGDIPAELGKLSFLIKLILAQNQLSGQLSPKLGLLVQLEHLDLSSNNLSNAIPESLGNLVKLHYLNLS 608 (1067)
Q Consensus 529 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls 608 (1067)
.|.+.+.++|++. ..-.++.-++.++.|+|++|++... ..+..++.|++|||+.|.++.+.--....+ +|..|+++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhh-hheeeeec
Confidence 4666677777776 3344556667778888888877643 367778888999999998874322222233 49999999
Q ss_pred CcccccccchhhhhccccceeccccccCCC-cchhhhhccccccccccccccccc
Q 001494 609 NNQFSWEIPIKLEELIHLSELDLSYNFLGR-AIPSQICIMQSLEKLNLSHNSLSG 662 (1067)
Q Consensus 609 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~ 662 (1067)
||.++. -..+.++++|+.|||++|-|.+ .-..-+..+..|+.|+|.+|++-.
T Consensus 241 nN~l~t--L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 241 NNALTT--LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ccHHHh--hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 998862 3457888999999999998866 233445667889999999999873
No 495
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.54 E-value=2.6e-06 Score=94.26 Aligned_cols=170 Identities=21% Similarity=0.271 Sum_probs=126.5
Q ss_pred CceeEEEEE-ECCCcEEEEEEeCCCCCCChhHHHHHHHHHHHHhcCCCCeeeeeeEEEee----CCceeEEEEeccC-CC
Q 001494 808 GQGSVYKVE-LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH----AQHSFIVYEYLEM-GS 881 (1067)
Q Consensus 808 ~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~E~~~~-g~ 881 (1067)
-..+.|++. ..+|..|++|+++....... ..-..-++.++++.|+|||++.+++.. +-..++||+|+++ ++
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 346778885 45899999999954322221 122345778999999999999998863 3467999999984 46
Q ss_pred HHHHhccc------------CccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccce
Q 001494 882 LAMILSND------------AAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAK 949 (1067)
Q Consensus 882 L~~~l~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~ 949 (1067)
|.+..-.. ......+++..+.++.|+..||.++|+. |..-+-+.+.+|+++.+.+++|+..|...
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEeccccee
Confidence 65544211 1122467889999999999999999999 99999999999999999999999888887
Q ss_pred ecCCCCCccccccccccccCccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 001494 950 FLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1000 (1067)
Q Consensus 950 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p 1000 (1067)
.+..+.. |.+.+ -.+-|.=.+|.+++.|.||..-
T Consensus 442 vl~~d~~--------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 442 VLQEDPT--------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred eecCCCC--------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 6654430 11111 1367899999999999999644
No 496
>PRK09902 hypothetical protein; Provisional
Probab=98.46 E-value=1.9e-06 Score=87.01 Aligned_cols=141 Identities=18% Similarity=0.170 Sum_probs=101.6
Q ss_pred cccCCceeEEEEEECCCcEEEEEEeCCCCCCC---hhHHHHHHHHHHHHhcCCC--CeeeeeeEEEe-eC----CceeEE
Q 001494 804 IGKGGQGSVYKVELASGEIIAVKKFHSPLPGE---MTFQQEFLNEVKALTEIRH--RNIVKFYGFCS-HA----QHSFIV 873 (1067)
Q Consensus 804 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~-~~----~~~~lv 873 (1067)
-|+||.+.|+..... |+.+-+|+-..-.... ..-...|.+|...+.++.. -.+++.+ ++. .. -..++|
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 567999999998776 4468888764111111 1124678899998888842 2255555 332 21 246899
Q ss_pred EEeccC-CCHHHHhcccCccCCCChHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCC--eEEecccccee
Q 001494 874 YEYLEM-GSLAMILSNDAAAEDLEWTQRMSVIKGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNE--ARVSDFGIAKF 950 (1067)
Q Consensus 874 ~E~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~--~kl~DfG~a~~ 950 (1067)
+|-+++ .+|.+++.... ..+.+...+..+..++++.++-||+. |+.|+|+.+.||+++.++. ++++||--++.
T Consensus 104 Te~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997763 48888874432 33567778889999999999999999 9999999999999987777 99999986653
No 497
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.43 E-value=7.5e-08 Score=110.36 Aligned_cols=147 Identities=18% Similarity=0.295 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHhCCCCCeeecCCCCCceeeCCCCCeEEeccccceecCCCCC----ccc-----cccccccccCcccccc
Q 001494 905 KGIADALSYLHNDCFPPIVHRDISSKNVLLDFKNEARVSDFGIAKFLKPDSS----NWT-----ELAGTYGYVAPELAYT 975 (1067)
Q Consensus 905 ~~i~~~l~~LH~~~~~~ivHrDlk~~Nill~~~~~~kl~DfG~a~~~~~~~~----~~~-----~~~gt~~y~aPE~~~~ 975 (1067)
.+++.|+.|+|.. +++||+.|.|++|.++..+.+||+.|+.+....++.. .++ -......|.|||++..
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 4556999999987 4999999999999999999999999998875544221 111 1123457999999998
Q ss_pred CCCCccchhHHHHHHHHHHHhCCCC-CCccccccccchhhhhhhhhccCC--CCCCCCcchHHHHHHHHHHHHhccCCCC
Q 001494 976 MKVTEKCDVYSFGVLALEVIKGKHP-GDFISLISSSSLNLNIALDEILDP--RLPIPSHNVQEKLISFVEVAISCLDESP 1052 (1067)
Q Consensus 976 ~~~~~~~DvwslGvil~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP 1052 (1067)
...+.++|+||+||.+|-+..|..+ ++...... ........+. ..... .+...++++=+.+++..++
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~------~~~~~~~~~~~~~~~~s----~~~p~el~~~l~k~l~~~~ 253 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL------SYSFSRNLLNAGAFGYS----NNLPSELRESLKKLLNGDS 253 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcc------hhhhhhccccccccccc----ccCcHHHHHHHHHHhcCCc
Confidence 8889999999999999999855544 33221111 0111111110 01111 1222347778888999999
Q ss_pred CCCCCHHHHHH
Q 001494 1053 ESRPTMQKVSQ 1063 (1067)
Q Consensus 1053 ~~Rpt~~evl~ 1063 (1067)
..||++.++..
T Consensus 254 ~~rp~~~~l~~ 264 (700)
T KOG2137|consen 254 AVRPTLDLLLS 264 (700)
T ss_pred ccCcchhhhhc
Confidence 99998777654
No 498
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.41 E-value=3.8e-08 Score=99.15 Aligned_cols=114 Identities=25% Similarity=0.171 Sum_probs=77.0
Q ss_pred ccccccEEEccCCCCCCCcccc-----cccccccceecccCcccccccch-----hhhhccccceeccccccCCCc----
Q 001494 574 LLVQLEHLDLSSNNLSNAIPES-----LGNLVKLHYLNLSNNQFSWEIPI-----KLEELIHLSELDLSYNFLGRA---- 639 (1067)
Q Consensus 574 ~l~~L~~L~Ls~N~l~~~~~~~-----l~~l~~L~~L~Ls~N~l~~~~~~-----~~~~l~~L~~L~Ls~N~l~~~---- 639 (1067)
.-+.|++.+...|++.. ++.. |..-..|+++.+..|.|.-.+-. .+..+.+|+.|||.+|-++..
T Consensus 155 ~kp~Le~vicgrNRlen-gs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~ 233 (388)
T COG5238 155 DKPKLEVVICGRNRLEN-GSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRY 233 (388)
T ss_pred cCCCceEEEeccchhcc-CcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHH
Confidence 34668888888888763 2222 22224678888888877533222 234567888899999988653
Q ss_pred chhhhhcccccccccccccccccccccccc------cCccccEEEcccCcCCCCC
Q 001494 640 IPSQICIMQSLEKLNLSHNSLSGVIPRCFE------EMHALQCIDISYNELRGPI 688 (1067)
Q Consensus 640 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~------~l~~L~~l~l~~N~l~~~~ 688 (1067)
...+++..+.|+.|++..+-++.....++. ..++|..|-..||...+.+
T Consensus 234 La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~ 288 (388)
T COG5238 234 LADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGI 288 (388)
T ss_pred HHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCce
Confidence 445566777889999999988876664443 3577888888888777543
No 499
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.40 E-value=1.1e-08 Score=92.48 Aligned_cols=132 Identities=27% Similarity=0.295 Sum_probs=92.3
Q ss_pred CcceEeccCCccccCCCCccccc---CccceeecCCCcccCCCCcccc-cccccceecccccccccCCCCcccccccccc
Q 001494 74 HLAYLDLWSNQLFGNIPPQIGNI---SKLKYLDLSSNLFSGAIPPQIG-HLSYLKTLHLFKNQLSGSIPLEVGGLSSLNN 149 (1067)
Q Consensus 74 ~l~~L~L~~n~l~~~~p~~~~~l---~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 149 (1067)
.+..+||+++++ +.+++....+ .+|+..+|++|.|. .+|+.|. +.+.++.|+|++|.++ .+|.++..++.|+.
T Consensus 28 E~h~ldLssc~l-m~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQL-MYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchh-hHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 455688888888 4677665554 45666699999998 5666664 5568899999999998 78888888888888
Q ss_pred ccccccccccccCCCccCCCcccEEEEeccCCcCccCCccccccccceecccccccccccC
Q 001494 150 LALYSNYLEDIIPHSLGNLTNLVTLCLYNNLLSGSIPSEIGNLKYLLDLNLYNNELNGSIP 210 (1067)
Q Consensus 150 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 210 (1067)
|++++|.+.. .|..+..|.+|-.||..+|.+. .+|..+..-+..-...+.++.+.+.-+
T Consensus 105 lNl~~N~l~~-~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 105 LNLRFNPLNA-EPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred cccccCcccc-chHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCc
Confidence 8888888876 5666667888888888888876 566543222222223345555554443
No 500
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.38 E-value=2.2e-06 Score=88.88 Aligned_cols=106 Identities=21% Similarity=0.311 Sum_probs=81.7
Q ss_pred HHHHHHHHHHhcCCC--CeeeeeeEEEeeCC----ceeEEEEeccCC-CHHHHhcccCccCCCChHHHHHHHHHHHHHHH
Q 001494 840 QEFLNEVKALTEIRH--RNIVKFYGFCSHAQ----HSFIVYEYLEMG-SLAMILSNDAAAEDLEWTQRMSVIKGIADALS 912 (1067)
Q Consensus 840 ~~~~~e~~~l~~l~h--~niv~l~~~~~~~~----~~~lv~E~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~ 912 (1067)
....+|...+..+.. =.++..+++..... ..++|+|++++. +|.+++..... .+......++.++++.++
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLIA 132 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHHH
Confidence 356677777766642 23455666655532 458999999874 78888854222 456677889999999999
Q ss_pred HHHhCCCCCeeecCCCCCceeeCCCC---CeEEeccccceec
Q 001494 913 YLHNDCFPPIVHRDISSKNVLLDFKN---EARVSDFGIAKFL 951 (1067)
Q Consensus 913 ~LH~~~~~~ivHrDlk~~Nill~~~~---~~kl~DfG~a~~~ 951 (1067)
-||+. ||+|+|+++.|||++.++ .+.++||+-++..
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999 999999999999999887 7999999988753
Done!