Query 001496
Match_columns 1066
No_of_seqs 187 out of 190
Neff 2.2
Searched_HMMs 13730
Date Tue Mar 26 16:43:21 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001496.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_797-801//hhsearch_scop/001496hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x0fa1 d.58.7.1 (A:183-257) N 97.6 3.6E-06 2.6E-10 45.6 0.3 43 675-717 6-50 (75)
2 d1uawa_ d.58.7.1 (A:) Musashi- 97.6 6.2E-06 4.5E-10 44.4 1.3 43 675-717 7-51 (77)
3 d2cq4a1 d.58.7.1 (A:132-232) R 97.6 6.2E-06 4.5E-10 44.4 1.1 44 674-717 24-69 (101)
4 d2cqga1 d.58.7.1 (A:96-185) TA 97.5 4E-06 2.9E-10 45.4 -1.6 42 675-716 15-58 (90)
5 d1x4ba1 d.58.7.1 (A:8-110) Het 97.5 1E-05 7.4E-10 43.3 0.5 43 675-717 27-71 (103)
6 d1whwa_ d.58.7.1 (A:) Probable 97.4 1.3E-05 9.7E-10 42.7 0.4 43 675-717 15-59 (99)
7 d2cqda1 d.58.7.1 (A:1-103) RNA 97.3 1.5E-05 1.1E-09 42.4 0.3 43 675-717 17-61 (103)
8 d1hd0a_ d.58.7.1 (A:) Heteroge 97.3 1.5E-05 1.1E-09 42.4 0.0 43 675-717 6-50 (75)
9 d2cqba1 d.58.7.1 (A:1-89) Pept 97.3 3E-05 2.2E-09 40.9 1.3 43 675-717 12-56 (89)
10 d1l3ka1 d.58.7.1 (A:8-91) Nucl 97.1 1.4E-05 1E-09 42.5 -1.7 42 675-716 13-56 (84)
11 d1x5ua1 d.58.7.1 (A:7-99) Spli 96.9 8.2E-05 5.9E-09 38.7 0.7 43 675-717 16-60 (93)
12 d1fxla2 d.58.7.1 (A:119-203) H 96.9 2.9E-05 2.1E-09 40.9 -1.7 43 675-717 13-57 (85)
13 d2cpha1 d.58.7.1 (A:454-547) P 96.9 8.4E-05 6.1E-09 38.6 0.5 43 675-717 15-60 (94)
14 d1cvja1 d.58.7.1 (A:11-90) Pol 96.9 3.2E-05 2.3E-09 40.7 -1.7 42 675-716 7-50 (80)
15 d2u2fa_ d.58.7.1 (A:) Splicing 96.9 9.5E-05 6.9E-09 38.3 0.7 43 675-717 8-52 (85)
16 d1rk8a_ d.58.7.1 (A:) RNA-bind 96.8 4.4E-05 3.2E-09 40.1 -1.5 42 675-716 14-57 (88)
17 d1b7fa2 d.58.7.1 (A:205-289) S 96.8 4.8E-05 3.5E-09 39.8 -1.4 42 675-716 13-56 (85)
18 d1p1ta_ d.58.7.1 (A:) Cleavage 96.8 3.2E-05 2.3E-09 40.8 -2.4 43 675-717 15-59 (104)
19 d2cqca1 d.58.7.1 (A:109-191) A 96.8 4.5E-05 3.3E-09 40.0 -1.7 43 675-717 16-60 (83)
20 d2cq0a1 d.58.7.1 (A:231-320) E 96.8 6.1E-05 4.4E-09 39.3 -1.1 42 675-716 15-58 (90)
21 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 96.6 7.1E-05 5.1E-09 39.0 -1.7 41 676-716 15-57 (93)
22 d1u6fa1 d.58.7.1 (A:1-139) RNA 96.6 3.5E-05 2.5E-09 40.6 -3.4 44 674-717 48-93 (139)
23 d1b7fa1 d.58.7.1 (A:123-204) S 96.4 0.00012 8.8E-09 37.8 -1.4 42 675-716 9-52 (82)
24 d1x5ta1 d.58.7.1 (A:8-90) Spli 96.4 0.00024 1.7E-08 36.3 0.1 43 675-717 5-50 (83)
25 d2cpza1 d.58.7.1 (A:383-484) C 96.4 0.00013 9.6E-09 37.6 -1.2 43 674-716 24-68 (102)
26 d1x4ha1 d.58.7.1 (A:8-105) RNA 96.3 0.0003 2.2E-08 35.8 0.2 43 675-717 15-59 (98)
27 d2msta_ d.58.7.1 (A:) Neural R 96.2 0.00044 3.2E-08 35.0 0.6 43 675-717 6-50 (75)
28 d1x4ea1 d.58.7.1 (A:8-79) RNA- 96.1 0.00057 4.2E-08 34.4 0.5 41 676-716 6-48 (72)
29 d1fxla1 d.58.7.1 (A:37-118) Hu 96.0 0.00024 1.8E-08 36.3 -1.7 43 675-717 9-53 (82)
30 d2ghpa3 d.58.7.1 (A:206-291) U 95.9 0.00049 3.6E-08 34.7 -0.6 42 676-717 12-57 (86)
31 d1no8a_ d.58.7.1 (A:) Nuclear 95.8 0.0005 3.6E-08 34.7 -0.7 41 675-716 7-49 (78)
32 d1x5sa1 d.58.7.1 (A:8-97) Cold 95.7 0.00084 6.1E-08 33.5 -0.1 43 675-717 12-56 (90)
33 d1l3ka2 d.58.7.1 (A:103-181) N 95.5 0.00051 3.7E-08 34.6 -1.6 42 675-716 9-52 (79)
34 d1zh5a2 d.58.7.1 (A:105-189) L 95.5 0.00052 3.8E-08 34.6 -1.7 41 675-716 13-55 (85)
35 d2f9da1 d.58.7.1 (A:12-125) Pr 95.5 0.00092 6.7E-08 33.3 -0.5 40 675-717 14-55 (114)
36 d1u1qa_ d.58.7.1 (A:) Nuclear 95.3 0.0007 5.1E-08 33.9 -1.4 44 674-717 103-148 (183)
37 d2cpfa1 d.58.7.1 (A:362-446) P 95.3 0.00036 2.6E-08 35.4 -3.1 42 676-717 6-52 (85)
38 d1wg5a_ d.58.7.1 (A:) Heteroge 95.3 0.0014 9.9E-08 32.5 -0.1 42 675-716 22-65 (104)
39 d1wi8a_ d.58.7.1 (A:) Eukaryot 94.9 0.003 2.2E-07 30.8 0.7 42 674-716 21-65 (104)
40 d1weza_ d.58.7.1 (A:) Heteroge 94.8 0.0012 8.5E-08 32.8 -1.5 40 675-716 22-63 (102)
41 d2cpya1 d.58.7.1 (A:536-638) R 94.6 0.0031 2.2E-07 30.7 0.2 42 675-716 15-58 (103)
42 d1cvja2 d.58.7.1 (A:91-179) Po 94.6 0.0028 2.1E-07 30.9 -0.0 41 675-717 15-57 (89)
43 d2cqia1 d.58.7.1 (A:1-90) Nucl 94.5 0.002 1.4E-07 31.7 -1.0 40 675-716 15-56 (90)
44 d2cpea1 d.58.7.1 (A:353-453) R 94.4 0.0043 3.1E-07 29.9 0.6 43 674-716 14-66 (101)
45 d2cpia1 d.58.7.1 (A:101-189) E 93.9 0.0053 3.8E-07 29.5 0.2 42 675-716 15-64 (89)
46 d2ghpa1 d.58.7.1 (A:116-196) U 93.8 0.0034 2.5E-07 30.4 -0.9 42 675-716 8-51 (81)
47 d2cq3a1 d.58.7.1 (A:110-202) R 93.8 0.0047 3.4E-07 29.7 -0.2 40 675-716 18-59 (93)
48 d1wf0a_ d.58.7.1 (A:) TAR DNA- 93.7 0.01 7.6E-07 28.0 1.4 38 675-717 12-51 (88)
49 d1wela1 d.58.7.1 (A:412-523) R 93.5 0.0019 1.4E-07 31.7 -2.6 43 675-717 25-69 (112)
50 d1u1qa_ d.58.7.1 (A:) Nuclear 93.4 0.0031 2.2E-07 30.7 -1.7 42 675-716 13-56 (183)
51 d1fjeb1 d.58.7.1 (B:1-91) Nucl 93.3 0.00093 6.8E-08 33.3 -4.6 41 675-716 20-62 (91)
52 d2disa1 d.58.7.1 (A:8-103) Hyp 92.9 0.0078 5.6E-07 28.6 -0.3 43 675-717 8-54 (96)
53 d2ghpa2 d.58.7.1 (A:41-115) U4 92.4 0.0059 4.3E-07 29.3 -1.4 40 676-717 8-49 (75)
54 d1x5oa1 d.58.7.1 (A:8-108) RNA 92.2 0.0059 4.3E-07 29.2 -1.6 42 675-717 25-68 (101)
55 d2cpxa1 d.58.7.1 (A:291-392) R 91.9 0.0027 2E-07 31.0 -3.6 43 675-717 25-69 (102)
56 d1jmta_ d.58.7.3 (A:) d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.65 E-value=3.6e-06 Score=45.57 Aligned_cols=43 Identities=14% Similarity=-0.042 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.+.+ ++||.|..|+||.|++|+.+|||+||.+..
T Consensus 6 nLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~ 50 (75)
T d1x0fa1 6 GLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKE 50 (75)
T ss_dssp SCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 899989899999999985876521224465545665289999788
No 2
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.63 E-value=6.2e-06 Score=44.38 Aligned_cols=43 Identities=9% Similarity=-0.086 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ +++|.|..++||.|++|+.+|||+||++..
T Consensus 7 nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~ 51 (77)
T d1uawa_ 7 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD 51 (77)
T ss_dssp SCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCC
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECC
T ss_conf 899969899999999986986202441136788866639999889
No 3
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.61 E-value=6.2e-06 Score=44.37 Aligned_cols=44 Identities=9% Similarity=-0.083 Sum_probs=40.4
Q ss_pred CCCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 88988876445346--556873012068998888888888777899
Q 001496 674 NSGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 674 nSLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-.|+++++++.|.+ +.||.|..|+|+.|.+|+.+|||+||.+..
T Consensus 24 ~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~ 69 (101)
T d2cq4a1 24 MQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCE 69 (101)
T ss_dssp ESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESC
T ss_pred ECCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEEEECC
T ss_conf 8999989999999997189749998865448876434148999899
No 4
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.46 E-value=4e-06 Score=45.37 Aligned_cols=42 Identities=5% Similarity=-0.131 Sum_probs=39.5
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-||++++++.|.+ +.||.|..|+|+.|+.|+..|||+||.+.
T Consensus 15 nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~ 58 (90)
T d2cqga1 15 GLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFT 58 (90)
T ss_dssp SCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEC
T ss_conf 99998999999999976263300000247887666777999979
No 5
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.46 E-value=1e-05 Score=43.30 Aligned_cols=43 Identities=14% Similarity=0.024 Sum_probs=40.1
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ .+||.|..++||.|+.++.+|+|+||.+..
T Consensus 27 nLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~ 71 (103)
T d1x4ba1 27 GLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71 (103)
T ss_dssp CCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSS
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECC
T ss_conf 999858899999999761866300001235677755769999787
No 6
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.39 E-value=1.3e-05 Score=42.70 Aligned_cols=43 Identities=9% Similarity=-0.180 Sum_probs=39.6
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ .+|+.|..|+|+.|+.++.+|+|+||.+..
T Consensus 15 nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~ 59 (99)
T d1whwa_ 15 NLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMF 59 (99)
T ss_dssp CCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEECC
T ss_conf 999869899999999764975065310244434667504999889
No 7
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.35 E-value=1.5e-05 Score=42.40 Aligned_cols=43 Identities=5% Similarity=-0.006 Sum_probs=39.9
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++|+.|.+ ++||.|.+|+|+.|++|+..|+|+||.+..
T Consensus 17 nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~ 61 (103)
T d2cqda1 17 GLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMAD 61 (103)
T ss_dssp CCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEECC
T ss_conf 999969599999877614432110002334445568769999789
No 8
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.32 E-value=1.5e-05 Score=42.36 Aligned_cols=43 Identities=12% Similarity=-0.069 Sum_probs=39.6
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++|+.|.+ +++|.|..++|+.|++|+.+|+|+||.+..
T Consensus 6 nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~ 50 (75)
T d1hd0a_ 6 GLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 50 (75)
T ss_dssp CCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 899859899999999754503333213588877767659999898
No 9
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.30 E-value=3e-05 Score=40.91 Aligned_cols=43 Identities=5% Similarity=-0.092 Sum_probs=39.6
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ +++|.|.+|+++.|+.++.+|||+||.+..
T Consensus 12 nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~ 56 (89)
T d2cqba1 12 GLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFEL 56 (89)
T ss_dssp SCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSS
T ss_pred CCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEEECC
T ss_conf 999868899999988647838861102455654556304999889
No 10
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.14 E-value=1.4e-05 Score=42.54 Aligned_cols=42 Identities=10% Similarity=0.018 Sum_probs=39.5
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ ++||.|..++|+.|+.|+.+|||+||.+.
T Consensus 13 nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~ 56 (84)
T d1l3ka1 13 GLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYA 56 (84)
T ss_dssp SCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEC
T ss_conf 99997989999999975064521000114667996228999986
No 11
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.94 E-value=8.2e-05 Score=38.69 Aligned_cols=43 Identities=5% Similarity=0.004 Sum_probs=39.6
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ +++|.|.+|+|+.|+.|+.+|+|+||.+..
T Consensus 16 nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~ 60 (93)
T d1x5ua1 16 GLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLS 60 (93)
T ss_dssp CCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEECC
T ss_conf 899858899999999984976542121012543566520799899
No 12
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.93 E-value=2.9e-05 Score=40.95 Aligned_cols=43 Identities=7% Similarity=-0.088 Sum_probs=39.4
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.+++ +++|.|.+++++.|++++.+|+|+||++..
T Consensus 13 nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~ 57 (85)
T d1fxla2 13 GLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDK 57 (85)
T ss_dssp SCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 989989899999999984976310301245443578716999858
No 13
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.90 E-value=8.4e-05 Score=38.64 Aligned_cols=43 Identities=9% Similarity=-0.076 Sum_probs=38.6
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCC-CCCCCCCCCCCCCC
Q ss_conf 8988876445346--5568730120689988-88888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQE-SSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqE-SG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ +++|.|..|+||.++. ++.+|||+||.+..
T Consensus 15 nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~ 60 (94)
T d2cpha1 15 NIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFIT 60 (94)
T ss_dssp SCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECC
T ss_conf 9999899999999999859964889885366679836689999899
No 14
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.90 E-value=3.2e-05 Score=40.75 Aligned_cols=42 Identities=7% Similarity=-0.118 Sum_probs=39.1
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++|+.+.+ +++|.|.+|+|+.|+.|+.+++|+||.+.
T Consensus 7 nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~ 50 (80)
T d1cvja1 7 DLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ 50 (80)
T ss_dssp SCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEEEEC
T ss_conf 79884879999999997698859999840454477883699988
No 15
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.89 E-value=9.5e-05 Score=38.34 Aligned_cols=43 Identities=7% Similarity=-0.037 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
.|+++++++.+.+ +++|.|..|+|+.|++|+..|+|+||.+..
T Consensus 8 nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~ 52 (85)
T d2u2fa_ 8 GLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVD 52 (85)
T ss_dssp TCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECC
T ss_conf 999989999999999745765247760245665654059999889
No 16
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=96.82 E-value=4.4e-05 Score=40.07 Aligned_cols=42 Identities=10% Similarity=0.030 Sum_probs=39.0
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+.+++++.|.+ +++|.|.+|+++.|++|+.+|+|+||++.
T Consensus 14 nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~ 57 (88)
T d1rk8a_ 14 SIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYE 57 (88)
T ss_dssp SCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 89998989999999987298641000123432255641168989
No 17
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=96.80 E-value=4.8e-05 Score=39.84 Aligned_cols=42 Identities=5% Similarity=-0.103 Sum_probs=39.3
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ +++|.|..++++.|++++.+|+|+||.+.
T Consensus 13 nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~ 56 (85)
T d1b7fa2 13 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 56 (85)
T ss_dssp SCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEEC
T ss_conf 98997999999999996598746431012355567606999989
No 18
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.78 E-value=3.2e-05 Score=40.75 Aligned_cols=43 Identities=14% Similarity=-0.046 Sum_probs=39.5
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ +++|.|.+|+++.|++|+.+|+|+||++..
T Consensus 15 nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~ 59 (104)
T d1p1ta_ 15 NIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 59 (104)
T ss_dssp SCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSC
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEECC
T ss_conf 999869899999766403322221101110001147846789899
No 19
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.77 E-value=4.5e-05 Score=39.99 Aligned_cols=43 Identities=14% Similarity=-0.095 Sum_probs=39.4
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ +++|.|.+|+|+.|++++.+|+|+||.+..
T Consensus 16 nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~ 60 (83)
T d2cqca1 16 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFEN 60 (83)
T ss_dssp SCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECC
T ss_conf 999989899999999985977300111366665555302899889
No 20
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.76 E-value=6.1e-05 Score=39.34 Aligned_cols=42 Identities=12% Similarity=-0.002 Sum_probs=39.2
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ +++|.|.+|+++.|++|+..|+|+||.+.
T Consensus 15 nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~ 58 (90)
T d2cq0a1 15 NLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFH 58 (90)
T ss_dssp SCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 99987989999999987562332111113554466632058989
No 21
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.61 E-value=7.1e-05 Score=39.01 Aligned_cols=41 Identities=10% Similarity=-0.137 Sum_probs=38.7
Q ss_pred CCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 988876445346--55687301206899888888888877789
Q 001496 676 GSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 676 LSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
|+++++++.|.+ +++|.|.+|+++.|+.++.+|||+||.+.
T Consensus 15 lp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~ 57 (93)
T d1h2vz_ 15 LSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYY 57 (93)
T ss_dssp CCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEES
T ss_pred CCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEC
T ss_conf 9997989999999998788620010246553222415799988
No 22
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=96.58 E-value=3.5e-05 Score=40.59 Aligned_cols=44 Identities=9% Similarity=-0.019 Sum_probs=40.2
Q ss_pred CCCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 88988876445346--556873012068998888888888777899
Q 001496 674 NSGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 674 nSLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
..|+++++++.|.+ ++||.|.+|++..|+.|+..|||+||.+..
T Consensus 48 ~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~ 93 (139)
T d1u6fa1 48 NYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQS 93 (139)
T ss_dssp ESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESS
T ss_pred ECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 6979889999999999765003221111221111122203689799
No 23
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=96.44 E-value=0.00012 Score=37.83 Aligned_cols=42 Identities=7% Similarity=0.047 Sum_probs=38.9
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ +++|.|..++++.|+.++.+|+|+||.+.
T Consensus 9 nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~ 52 (82)
T d1b7fa1 9 YLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFT 52 (82)
T ss_dssp CCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEC
T ss_conf 97997989999999998598146646632036886422437989
No 24
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.44 E-value=0.00024 Score=36.33 Aligned_cols=43 Identities=5% Similarity=-0.043 Sum_probs=37.9
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEE-ECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012-068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSG-SRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SV-RIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ +++|.|..+ +++.|++|+.+++|+||.+..
T Consensus 5 nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~ 50 (83)
T d1x5ta1 5 NLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFAS 50 (83)
T ss_dssp CCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSS
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCEEEEEECC
T ss_conf 8989486999999998729450467997611332447539999899
No 25
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.43 E-value=0.00013 Score=37.63 Aligned_cols=43 Identities=12% Similarity=-0.045 Sum_probs=39.9
Q ss_pred CCCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 88988876445346--55687301206899888888888877789
Q 001496 674 NSGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 674 nSLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
.-|+++++++.|.+ +++|.+.++++..+++++..|||+||.+.
T Consensus 24 ~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~ 68 (102)
T d2cpza1 24 YHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYD 68 (102)
T ss_dssp ESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECS
T ss_pred ECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEC
T ss_conf 599999999999999976334543210000136987653388748
No 26
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.34 E-value=0.0003 Score=35.79 Aligned_cols=43 Identities=14% Similarity=0.045 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ ++||.+.+++++.++.++.++||+||.+..
T Consensus 15 nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~ 59 (98)
T d1x4ha1 15 NLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMT 59 (98)
T ss_dssp SCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECC
T ss_conf 899968899999877512422033320366554566258999869
No 27
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.24 E-value=0.00044 Score=34.97 Aligned_cols=43 Identities=7% Similarity=-0.061 Sum_probs=39.6
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-||++++++.|.+ +++|.+..+++++++.++.+++|+||++..
T Consensus 6 nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~ 50 (75)
T d2msta_ 6 GLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFES 50 (75)
T ss_dssp CCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSC
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECC
T ss_conf 899988899999999986874022332103433567336999989
No 28
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.09 E-value=0.00057 Score=34.38 Aligned_cols=41 Identities=7% Similarity=-0.104 Sum_probs=38.6
Q ss_pred CCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 988876445346--55687301206899888888888877789
Q 001496 676 GSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 676 LSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
|+++++++.|++ ++||.|..++++.++.++.+++|+||++.
T Consensus 6 Lp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~ 48 (72)
T d1x4ea1 6 LQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFD 48 (72)
T ss_dssp CCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEES
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 9985889999998863233322111000233223411599988
No 29
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.00 E-value=0.00024 Score=36.28 Aligned_cols=43 Identities=9% Similarity=-0.054 Sum_probs=39.3
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ ++||.|..|+++.|+.++..++|+||.+..
T Consensus 9 nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~ 53 (82)
T d1fxla1 9 YLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 53 (82)
T ss_dssp SCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEEECC
T ss_conf 989879899999999996976410100002578730258999899
No 30
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.88 E-value=0.00049 Score=34.73 Aligned_cols=42 Identities=10% Similarity=-0.028 Sum_probs=35.5
Q ss_pred CCCCCC-CCCCCC--CCCCCCEEEECCCC-CCCCCCCCCCCCCCCC
Q ss_conf 988876-445346--55687301206899-8888888888777899
Q 001496 676 GSDDAN-QESSWG--KKQGNWNSGSRDGH-QESSWGKKSDWNSRSE 717 (1066)
Q Consensus 676 LSFDAN-EDSVWe--se~GSI~SVRIPTD-qESG~pKGFGYV~~~e 717 (1066)
|+++++ ||.+.+ ++||.|.+|+|+.+ ++++.+|||+||.+..
T Consensus 12 Lp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~ 57 (86)
T d2ghpa3 12 LSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFEN 57 (86)
T ss_dssp ECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEECC
T ss_conf 9977434999999977531211100000257765552265689889
No 31
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.84 E-value=0.0005 Score=34.69 Aligned_cols=41 Identities=5% Similarity=-0.144 Sum_probs=37.2
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+.+++++.+.+ +++|.|.+++++.++ ++.+++|+||.+.
T Consensus 7 nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~ 49 (78)
T d1no8a_ 7 NLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFE 49 (78)
T ss_dssp SCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCEEEEEEEEE-CCCCCEEEEEEEC
T ss_conf 899879899999999985997289999860-1245436899998
No 32
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.66 E-value=0.00084 Score=33.54 Aligned_cols=43 Identities=16% Similarity=0.038 Sum_probs=39.3
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ +++|.|..+.++.++.++.++||+||.+..
T Consensus 12 nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~ 56 (90)
T d1x5sa1 12 GLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56 (90)
T ss_dssp SCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSS
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEECC
T ss_conf 999868799998756402222110110000333346638999878
No 33
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.54 E-value=0.00051 Score=34.63 Aligned_cols=42 Identities=7% Similarity=-0.023 Sum_probs=39.3
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ ++||.+..+.++.++.++..++|+||.+.
T Consensus 9 nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~ 52 (79)
T d1l3ka2 9 GIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFD 52 (79)
T ss_dssp CCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 98985879999999997551332210357887554418999993
No 34
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.48 E-value=0.00052 Score=34.59 Aligned_cols=41 Identities=12% Similarity=-0.122 Sum_probs=37.0
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ +.+|.|..|+++.++ ++.+|||+||++.
T Consensus 13 nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~ 55 (85)
T d1zh5a2 13 GFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFD 55 (85)
T ss_dssp CCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCEEEEEC-CCCCCEEEEEEEC
T ss_conf 979879799999989875524230032102-5886357899984
No 35
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.47 E-value=0.00092 Score=33.33 Aligned_cols=40 Identities=10% Similarity=0.053 Sum_probs=34.8
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ ++||.|..|+++.++. .|||+||++..
T Consensus 14 nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~---~kG~afV~f~~ 55 (114)
T d2f9da1 14 NLPYKITAEEMYDIFGKYGPIRQIRVGNTPE---TRGTAYVVYED 55 (114)
T ss_dssp SCCTTCCHHHHHHHHHTTSCEEEEEEECSTT---TTTEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEECCCCCCC---CCCEEEEEECC
T ss_conf 9999898999999985269867601234677---67769999788
No 36
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.33 E-value=0.0007 Score=33.94 Aligned_cols=44 Identities=7% Similarity=0.001 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 88988876445346--556873012068998888888888777899
Q 001496 674 NSGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 674 nSLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
.-|+++++++.|.+ +.||.|..+++++|++++.+|+|+||.+..
T Consensus 103 ~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~ 148 (183)
T d1u1qa_ 103 GGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDD 148 (183)
T ss_dssp ECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESC
T ss_pred CCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEECC
T ss_conf 1677767899996543158865322330026668501059999789
No 37
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.29 E-value=0.00036 Score=35.44 Aligned_cols=42 Identities=12% Similarity=0.032 Sum_probs=37.0
Q ss_pred CCCCCCCCCCCC--CCCCCCEEEECCCCCCCCC---CCCCCCCCCCC
Q ss_conf 988876445346--5568730120689988888---88888777899
Q 001496 676 GSDDANQESSWG--KKQGNWNSGSRDGHQESSW---GKKSDWNSRSE 717 (1066)
Q Consensus 676 LSFDANEDSVWe--se~GSI~SVRIPTDqESG~---pKGFGYV~~~e 717 (1066)
|+++++++.|.+ ++||.|.+|+++.++++.. +|||+||++..
T Consensus 6 Lp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~ 52 (85)
T d2cpfa1 6 LNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKK 52 (85)
T ss_dssp CCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESS
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEEEECC
T ss_conf 99979899999999983980322100023323545331378999899
No 38
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.28 E-value=0.0014 Score=32.48 Aligned_cols=42 Identities=5% Similarity=-0.182 Sum_probs=36.4
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|||+++++.|.+ ..++.+..+.+..+..++.+|||+||.+.
T Consensus 22 nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~ 65 (104)
T d1wg5a_ 22 GLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFA 65 (104)
T ss_dssp SCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEC
T ss_conf 89998989999998875387247889776899972368899748
No 39
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.90 E-value=0.003 Score=30.76 Aligned_cols=42 Identities=10% Similarity=-0.072 Sum_probs=36.1
Q ss_pred CCCCCCCCCCCCCC--CCCCCCEEEECCCCC-CCCCCCCCCCCCCC
Q ss_conf 88988876445346--556873012068998-88888888877789
Q 001496 674 NSGSDDANQESSWG--KKQGNWNSGSRDGHQ-ESSWGKKSDWNSRS 716 (1066)
Q Consensus 674 nSLSFDANEDSVWe--se~GSI~SVRIPTDq-ESG~pKGFGYV~~~ 716 (1066)
.-|+++++++.|.+ ++|+ ++.++++.++ .++.+|+|+||++.
T Consensus 21 ~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~ 65 (104)
T d1wi8a_ 21 GNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFE 65 (104)
T ss_dssp ESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEES
T ss_pred ECCCCCCCHHHHHHHHHHHC-CCCCEEEEEECCCCCCCEEEEEEEC
T ss_conf 09998698999999999832-1531023431147886135457877
No 40
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.84 E-value=0.0012 Score=32.81 Aligned_cols=40 Identities=3% Similarity=-0.235 Sum_probs=35.0
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|||+++++.|.+ .+++ ++.|+++.+++ +..++|+||++.
T Consensus 22 nLp~~~te~dl~~~F~~~~-~~~v~~~~~~~-g~~~G~afVeF~ 63 (102)
T d1weza_ 22 GLPYRATENDIYNFFSPLN-PMRVHIEIGPD-GRVTGEADVEFA 63 (102)
T ss_dssp SCCTTCCHHHHHHSSCSCC-CSEEEEEESSS-SCEEEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHCCC-CCEEEEEEECC-CCCEEEEEEEEC
T ss_conf 8998688999987874247-52246677247-860477789987
No 41
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.62 E-value=0.0031 Score=30.67 Aligned_cols=42 Identities=2% Similarity=-0.239 Sum_probs=34.1
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ ..++.+..+.+....+++.+|||+||++.
T Consensus 15 nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~ 58 (103)
T d2cpya1 15 NIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFK 58 (103)
T ss_dssp SCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECS
T ss_pred CCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCEEEEEC
T ss_conf 98988888998642102223777888876898985763789988
No 42
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.59 E-value=0.0028 Score=30.87 Aligned_cols=41 Identities=10% Similarity=0.025 Sum_probs=36.0
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+.+++++.|.+ +++|.|..++|+.++.+ .|+|+||.+..
T Consensus 15 nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~--~kg~afV~f~~ 57 (89)
T d1cvja2 15 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFET 57 (89)
T ss_dssp SCCSSCCHHHHHHHHHTTSCEEEEEECCBTTB--CCSCEEEEESC
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEEEEECCC--CCCEEEEEECC
T ss_conf 89999999999999986399607999850478--74033799899
No 43
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.48 E-value=0.002 Score=31.67 Aligned_cols=40 Identities=13% Similarity=-0.058 Sum_probs=35.7
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
.|+.+++++.|.+ +++|.|.+|+++.|+.+. ++|+||++.
T Consensus 15 nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~--~~~afV~f~ 56 (90)
T d2cqia1 15 NLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFY 56 (90)
T ss_dssp SCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSS--CCEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC--CEEEEEEEC
T ss_conf 999979899999999763994366441266764--100288888
No 44
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.41 E-value=0.0043 Score=29.95 Aligned_cols=43 Identities=14% Similarity=-0.102 Sum_probs=36.9
Q ss_pred CCCCCCCCCCCCCC--CCCCCC--------EEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 88988876445346--556873--------01206899888888888877789
Q 001496 674 NSGSDDANQESSWG--KKQGNW--------NSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 674 nSLSFDANEDSVWe--se~GSI--------~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
.-|+++++++.|.+ .+||.| ..+++++|++++..++|+||.+.
T Consensus 14 ~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~ 66 (101)
T d2cpea1 14 QGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYE 66 (101)
T ss_dssp ECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBS
T ss_pred ECCCCCCCHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCCCCCEEEEEEC
T ss_conf 79998688999998788774378756325303677542664443412358766
No 45
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.90 E-value=0.0053 Score=29.48 Aligned_cols=42 Identities=10% Similarity=-0.062 Sum_probs=34.3
Q ss_pred CCCCCCCCCCC---CC--CCCCCCEEEECCCCCCCCCCC---CCCCCCCC
Q ss_conf 89888764453---46--556873012068998888888---88877789
Q 001496 675 SGSDDANQESS---WG--KKQGNWNSGSRDGHQESSWGK---KSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSV---We--se~GSI~SVRIPTDqESG~pK---GFGYV~~~ 716 (1066)
-|+++++++.+ .+ ++||.|..|+++.++.+...+ +|+||++.
T Consensus 15 nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~ 64 (89)
T d2cpia1 15 GLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYI 64 (89)
T ss_dssp EECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECC
T ss_conf 98976387899988987635588258777202676877776537998515
No 46
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.85 E-value=0.0034 Score=30.45 Aligned_cols=42 Identities=5% Similarity=-0.131 Sum_probs=37.6
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.+.+ +++|.|..+.+..++.++.+++|+||++.
T Consensus 8 nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~ 51 (81)
T d2ghpa1 8 NFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVT 51 (81)
T ss_dssp CCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEC
T ss_conf 97986989999999998296876422000112345521589989
No 47
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.80 E-value=0.0047 Score=29.75 Aligned_cols=40 Identities=5% Similarity=-0.197 Sum_probs=35.8
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ .++|.|.+|++..++.+ +|+|+||.+.
T Consensus 18 nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~--~kg~afV~f~ 59 (93)
T d2cq3a1 18 NIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFE 59 (93)
T ss_dssp SCCTTCCHHHHHHHGGGTSCEEEEEEECCTTT--TCCEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHCCEEEECCCCCCCCC--CCCEEEEEEC
T ss_conf 98998999999999863443300011256667--7402378988
No 48
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.69 E-value=0.01 Score=27.96 Aligned_cols=38 Identities=5% Similarity=-0.045 Sum_probs=33.0
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ ++||.|..|+++.+ .++|+||++..
T Consensus 12 nLp~~~te~~L~~~F~~~G~v~~v~~~~~-----~~gfafV~f~~ 51 (88)
T d1wf0a_ 12 RCTGDMTEDELREFFSQYGDVMDVFIPKP-----FRAFAFVTFAD 51 (88)
T ss_dssp SCCSSSCHHHHHHHSTTTSCCCEEECCSS-----CCSCCEEECSC
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEEEEC-----CCCEEEEEECC
T ss_conf 89988989999888998298449999421-----37658999889
No 49
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.48 E-value=0.0019 Score=31.70 Aligned_cols=43 Identities=7% Similarity=-0.119 Sum_probs=36.7
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+|+++++.|.+ +.++.+..+.++.+..++.++||+||.+..
T Consensus 25 nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~ 69 (112)
T d1wela1 25 GLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN 69 (112)
T ss_dssp CCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSS
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEECC
T ss_conf 699757599996677533444321022107654300478999889
No 50
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.41 E-value=0.0031 Score=30.66 Aligned_cols=42 Identities=10% Similarity=0.018 Sum_probs=38.4
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+.+++++.|.+ +++|.|.++.++.++.++..++|+|+.+.
T Consensus 13 nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~ 56 (183)
T d1u1qa_ 13 GLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYA 56 (183)
T ss_dssp SCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEECCCC
T ss_conf 98998989999999987398789986411247885574322048
No 51
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=93.25 E-value=0.00093 Score=33.31 Aligned_cols=41 Identities=5% Similarity=-0.186 Sum_probs=36.4
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.. ++||.|.++++. ++.++.+|+|+||.+.
T Consensus 20 nL~~~~te~~l~~~F~~~G~i~~~~v~-~~~~g~~kg~afv~F~ 62 (91)
T d1fjeb1 20 NLNPNKSVAELKVAISELFAKNDLAVV-DVRTGTNRKFGYVDFE 62 (91)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHHTCCCC-EEEEETTTTEEEEEES
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEEEEE-ECCCCCCCEEEEEEEC
T ss_conf 765761288999998637847875410-0689985377678638
No 52
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.87 E-value=0.0078 Score=28.63 Aligned_cols=43 Identities=5% Similarity=-0.156 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCCC--CCCCC-CEEEECCCCC-CCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687-3012068998-888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGN-WNSGSRDGHQ-ESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GS-I~SVRIPTDq-ESG~pKGFGYV~~~e 717 (1066)
-|+.+++++.|.+ +++|. |..|+++.|+ +++..+||+||.+..
T Consensus 8 nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~ 54 (96)
T d2disa1 8 GIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYES 54 (96)
T ss_dssp CCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEECC
T ss_conf 98986889999999998697505899864112323678759999839
No 53
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.42 E-value=0.0059 Score=29.25 Aligned_cols=40 Identities=10% Similarity=-0.065 Sum_probs=34.9
Q ss_pred CCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 988876445346--556873012068998888888888777899
Q 001496 676 GSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 676 LSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
|+++++++.|++ ..||.|..|+++.+++. .++|+||++..
T Consensus 8 lp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~--~~~~afV~F~~ 49 (75)
T d2ghpa2 8 LPKSYNQNKVYKYFKHCGPIIHVDVADSLKK--NFRFARIEFAR 49 (75)
T ss_dssp ECTTCCHHHHHHHHGGGSCEEEEEEEECTTS--SSEEEEEEESS
T ss_pred CCCCCCHHHHHHHHHCCCCEEEEEEEEECCC--CCEEEEEEECC
T ss_conf 9999988999998712881699999750233--31699999832
No 54
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.19 E-value=0.0059 Score=29.22 Aligned_cols=42 Identities=10% Similarity=-0.072 Sum_probs=36.9
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ ++||.|..+++..+. ++..++|+||.+..
T Consensus 25 nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~ 68 (101)
T d1x5oa1 25 NLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMES 68 (101)
T ss_dssp SCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCEEEECCC-CCCCCCCEEEEECC
T ss_conf 999989899999888613664210110011-23566310477689
No 55
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.90 E-value=0.0027 Score=30.95 Aligned_cols=43 Identities=2% Similarity=-0.134 Sum_probs=38.8
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+.+++++.|.+ .++|.|..+++..++.++.+++|+||.+..
T Consensus 25 nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~ 69 (102)
T d2cpxa1 25 NLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPN 69 (102)
T ss_dssp CCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSS
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEECC
T ss_conf 999989899999978534542467753046655555321477433
No 56
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.86 E-value=0.0057 Score=29.30 Aligned_cols=38 Identities=8% Similarity=-0.139 Sum_probs=30.6
Q ss_pred CCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 876445346--556873012068998888888888777899
Q 001496 679 DANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 679 DANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
+..||.+.+ ++||.|.+|+|+.+ .++.+|||+||.+..
T Consensus 38 ~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~ 77 (104)
T d1jmta_ 38 EFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRR 77 (104)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESC
T ss_pred HHHHHHHHHHHCCCCCEEEEEEECC-CCCCEEEEEEEEEEC
T ss_conf 6569999998505787899996218-999884179999954
No 57
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.77 E-value=0.021 Score=26.42 Aligned_cols=37 Identities=16% Similarity=-0.025 Sum_probs=31.9
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.. ++||.|..|+|+. .|+|+||.+..
T Consensus 18 nL~~~~tee~Lk~~F~~fG~V~~v~i~~------~kg~gfV~F~~ 56 (113)
T d1owxa_ 18 DLDDQTCREDLHILFSNHGEIKWIDFVR------GAKEGIILFKE 56 (113)
T ss_dssp SCCSSCCHHHHHHHTCSSCCEEEEECCT------TCSEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHCCCHHEEEEEC------CCCEEEEEECC
T ss_conf 9998787999999998357741488745------88668999668
No 58
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.80 E-value=0.0078 Score=28.61 Aligned_cols=42 Identities=2% Similarity=-0.247 Sum_probs=33.6
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ ..++.+....+..+.+++.++||+||.+.
T Consensus 16 nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~ 59 (86)
T d2cqpa1 16 NMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFE 59 (86)
T ss_dssp SCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEC
T ss_conf 98998989999987751246426999976899996608999982
No 59
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.56 E-value=0.015 Score=27.24 Aligned_cols=36 Identities=8% Similarity=-0.161 Sum_probs=31.9
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
.|+++++++.|.+ +++|.|.+|+++.| |+|+||.+.
T Consensus 25 nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~ 62 (96)
T d1x4ga1 25 GIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFS 62 (96)
T ss_dssp CCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCEEEEEEEC------CEEEEEEEC
T ss_conf 89998999999999998299669999701------308999989
No 60
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.06 E-value=0.046 Score=24.72 Aligned_cols=37 Identities=8% Similarity=-0.121 Sum_probs=31.8
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ +.||.|..|+|+. .|+|+||.+..
T Consensus 17 nLp~~~t~~~L~~~F~~fG~I~~v~l~~------~kg~afV~f~~ 55 (111)
T d1whxa_ 17 NLPAGTLAAEIQETFSRFGSLGRVLLPE------GGITAIVEFLE 55 (111)
T ss_dssp SCCTTCCHHHHHHHHHTTSCEEEEECCS------SSSCEEEEESC
T ss_pred CCCCCCCHHHHHHHHHCCCCCCEEEEEC------CCCEEEEEECC
T ss_conf 9899888999976640268861899604------68638999847
No 61
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.55 E-value=0.051 Score=24.45 Aligned_cols=35 Identities=3% Similarity=-0.139 Sum_probs=30.8
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ ++||.|..++++.| +|+||.+.
T Consensus 7 nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~ 43 (87)
T d3begb1 7 GLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFV 43 (87)
T ss_dssp ECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCC-------CEEEEEEC
T ss_conf 99985889999998752212321100223-------21357748
No 62
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.49 E-value=0.02 Score=26.50 Aligned_cols=42 Identities=7% Similarity=-0.122 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECC-----CCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068-----99888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRD-----GHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIP-----TDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ ++++.+..+.+. .+.+++..|+|+||++.
T Consensus 8 NLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~ 56 (90)
T d1u2fa_ 8 NIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFR 56 (90)
T ss_dssp SCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEEEEECCCEEEECCCCCCCEEEEEEEC
T ss_conf 9997624589888898608577999942560566446997628999838
No 63
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.26 E-value=0.029 Score=25.70 Aligned_cols=38 Identities=5% Similarity=-0.235 Sum_probs=32.7
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ ++||.|..|.+..+. .++|+||++.
T Consensus 14 NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~ 53 (108)
T d2adba1 14 NLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYA 53 (108)
T ss_dssp SCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEES
T ss_pred CCCCCCCHHHHHHHHCCCCCEEEEEEEEEC----CCCEEEEEEC
T ss_conf 929999899998887039758997998508----9981899989
No 64
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.55 E-value=0.1 Score=22.88 Aligned_cols=36 Identities=14% Similarity=-0.013 Sum_probs=31.0
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+.+++++.|.+ ++||.|..|+++.+ |+|+||.+.
T Consensus 15 nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~ 52 (86)
T d2cpja1 15 NLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLE 52 (86)
T ss_dssp SCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHHCCCEEEEEECC------CCEEEEEEC
T ss_conf 99987989999999998698607634213------536999988
No 65
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.07 E-value=0.17 Score=21.83 Aligned_cols=41 Identities=10% Similarity=-0.017 Sum_probs=33.9
Q ss_pred CCCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 88988876445346--556873012068998888888888777899
Q 001496 674 NSGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 674 nSLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
.-|+++++++.|.+ ++|+.|..++++.++ ..|+|+||.+..
T Consensus 20 ~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~---~~~g~afV~f~~ 62 (95)
T d1x4aa1 20 GNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR---GGPPFAFVEFED 62 (95)
T ss_dssp ESCCTTCCHHHHHHHHGGGSCEEEEEECCSS---SSSCCEEEEESC
T ss_pred ECCCCCCCHHHHHHHHHCCCCEEEEEECCCC---CCCCEEEEEECC
T ss_conf 7989889899999988427866998841565---546539999889
No 66
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.06 E-value=0.2 Score=21.41 Aligned_cols=36 Identities=3% Similarity=-0.100 Sum_probs=30.8
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|++ +++|.|..+++..+ |+|+||++.
T Consensus 24 nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~ 61 (97)
T d1whya_ 24 GLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYE 61 (97)
T ss_dssp CCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEECC------CCEEEECCC
T ss_conf 89998989999999975345624764022------217876149
No 67
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.33 E-value=0.097 Score=23.06 Aligned_cols=39 Identities=8% Similarity=-0.103 Sum_probs=31.3
Q ss_pred CCCCCCCCCCCC------CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 988876445346------556873012068998888888888777899
Q 001496 676 GSDDANQESSWG------KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 676 LSFDANEDSVWe------se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
|+++++++.+.+ +++|.|.+|+++ .++..++|+||.+..
T Consensus 11 Lp~~~t~~dl~~~l~~~f~~~G~i~~i~~~---~~~~~~g~afV~F~~ 55 (91)
T d1nu4a_ 11 LNEKIKKDELKKSLHAIFSRFGQILDILVS---RSLKMRGQAFVIFKE 55 (91)
T ss_dssp CCTTSCHHHHHHHHHHHHGGGSCEEEEECC---HHHHHTTCEEEEESS
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCEEEE---EECCCCCCEEEEECC
T ss_conf 999999999999999870312325532885---430689815788899
No 68
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.45 E-value=0.23 Score=21.15 Aligned_cols=37 Identities=8% Similarity=-0.076 Sum_probs=30.2
Q ss_pred CCC-CCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 988-876445346--556873012068998888888888777899
Q 001496 676 GSD-DANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 676 LSF-DANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
|+. .++++.|.+ ++||.|..|++..+. |+|+||++..
T Consensus 10 L~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~ 49 (109)
T d2adca1 10 LNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMAD 49 (109)
T ss_dssp CCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCEEEEEECC-----CCEEEEEECC
T ss_conf 992529999999987503564049997603-----4258999778
No 69
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=74.35 E-value=0.35 Score=20.20 Aligned_cols=39 Identities=3% Similarity=-0.095 Sum_probs=32.1
Q ss_pred CCCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 88988876445346--556873012068998888888888777899
Q 001496 674 NSGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 674 nSLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
.-|+.+++++.+.. +++|.|..|++..+ .++|+||.+..
T Consensus 14 ~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~-----~~g~afV~f~~ 54 (83)
T d2b0ga1 14 TNLPEETNEMMLSMLFNQFPGFKEVRLVPN-----RHDIAFVEFTT 54 (83)
T ss_dssp ESCCTTCCHHHHHHHHTTSTTEEEEEECTT-----TCSCEEEEESS
T ss_pred ECCCCCCCHHHHHHHHCCCCCEEEEEEECC-----CCEEEEEECCC
T ss_conf 889987779999754235764787431011-----21148995199
No 70
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=73.35 E-value=0.26 Score=20.83 Aligned_cols=37 Identities=8% Similarity=-0.189 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+.+++|+.|.+ +.||.|..+++. ..|+|+||++..
T Consensus 22 nlp~~~te~~l~~~F~~fG~I~~~~~~------~~k~~AfV~f~~ 60 (104)
T d1wexa_ 22 GLCESVVEADLVEALEKFGTICYVMMM------PFKRQALVEFEN 60 (104)
T ss_dssp SCCSSCCHHHHHHHHTTTSCEEEEEEE------TTTTEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEEE------ECCEEEEEEECC
T ss_conf 899999799999766025653499997------311037998689
No 71
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.09 E-value=0.21 Score=21.35 Aligned_cols=36 Identities=8% Similarity=-0.023 Sum_probs=31.1
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
.|+++++|+.+.+ ++||.|..++++.+ |+|+||.+.
T Consensus 27 ~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~ 64 (101)
T d2cq2a1 27 GLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYR 64 (101)
T ss_dssp TGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCC------CCEEEEEEC
T ss_conf 89998789999999975276617863267------508999989
No 72
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.09 E-value=0.41 Score=19.86 Aligned_cols=38 Identities=11% Similarity=-0.024 Sum_probs=30.5
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.+.+ ++||.+..+++.... .++|+||++.
T Consensus 17 NLp~~~te~~l~~~F~~~G~v~~~~~~~~~----~~~~afV~f~ 56 (88)
T d2adca2 17 NIPPSVSEEDLKVLFSSNGGVVKGFKFFQK----DRKMALIQMG 56 (88)
T ss_dssp CCCTTCCHHHHHHHHHTTSCCEEEEEECSS----STTCEEEEES
T ss_pred CCCCCCCHHHHHHHHHCCCCEEEEEEEEEC----CCCEEEEEEC
T ss_conf 999888999999985336978888875302----4400699989
No 73
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.88 E-value=0.36 Score=20.14 Aligned_cols=33 Identities=18% Similarity=0.135 Sum_probs=27.9
Q ss_pred CCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8876445346--55687301206899888888888877789
Q 001496 678 DDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 678 FDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
++++|+.|++ ++||.|.+++++. .++|+||.+.
T Consensus 13 ~~~te~~L~~~F~~~G~I~~v~~~~------~~~~afV~f~ 47 (79)
T d2bz2a1 13 EDMTPTLLRGAFSPFGNIIDLSMDP------PRNCAFVTYE 47 (79)
T ss_dssp SSCCHHHHHHHHSTTCCCSCEEEET------TTTEEEEECS
T ss_pred CCCCHHHHHHHHHCCCCCCEEEECC------CCCEEEEEEC
T ss_conf 9799999999985507564352026------8988999992
No 74
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.05 E-value=0.38 Score=20.00 Aligned_cols=37 Identities=3% Similarity=-0.095 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 88988876445346--556873012068998888888888777899
Q 001496 674 NSGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 674 nSLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
.-|+++++++.|.+ ++||.|..++|. .++|+||.+..
T Consensus 21 ~Nlp~~~~~~~L~~~F~~~G~v~~~~i~-------~~g~afV~f~~ 59 (98)
T d1wg4a_ 21 SGLPPSGSWQDLKDHMREAGDVCYADVQ-------KDGMGMVEYLR 59 (98)
T ss_dssp ECCCSSCCHHHHHHHHTTSSCEEEEEEE-------TTTEEEEEESS
T ss_pred ECCCCCCCHHHHHHHHHHHCCCCCCCCC-------CCCEEEEEECC
T ss_conf 7799999899999999752234320013-------34469999789
No 75
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.67 E-value=0.29 Score=20.65 Aligned_cols=34 Identities=12% Similarity=-0.107 Sum_probs=27.3
Q ss_pred CC-CCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 98-8876445346--556873012068998888888888777899
Q 001496 676 GS-DDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 676 LS-FDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
|+ +.+++..|.+ ++||.|..|++ .|+|+||++..
T Consensus 23 L~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~ 59 (98)
T d1wf2a_ 23 LNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVN 59 (98)
T ss_dssp ECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEEE--------ECCEEEEEECC
T ss_conf 89021999999999862698799997--------08868999799
No 76
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=64.65 E-value=0.8 Score=18.39 Aligned_cols=38 Identities=5% Similarity=-0.084 Sum_probs=29.7
Q ss_pred CCCCCC-CCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 889888-76445346--556873012068998888888888777899
Q 001496 674 NSGSDD-ANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 674 nSLSFD-ANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
.-|+.+ ++++.|.+ +.||.|..|++.- .|+|+||.+..
T Consensus 24 ~nLp~~~~te~~l~~~F~~fG~V~~v~~~~------~k~~afV~f~~ 64 (99)
T d1x4fa1 24 SNLPHSGYSDSAVLKLAEPYGKIKNYILMR------MKSQAFIEMET 64 (99)
T ss_dssp ESCCCSSCCSHHHHTTTTTTSCCSEEEEET------TTTEEEEECSS
T ss_pred ECCCCCCCCHHHHHHHHCCCCCEEEEEEEE------CCCCEEEEECC
T ss_conf 378677538999986653445304898760------47727999635
No 77
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=62.37 E-value=0.2 Score=21.43 Aligned_cols=39 Identities=8% Similarity=-0.112 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 88988876445346--556873012068998888888888777899
Q 001496 674 NSGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 674 nSLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
.-|+++++++.|.+ ++++.|..++ .++..++|+||.+..
T Consensus 22 ~nL~~~~te~~l~~~F~~~g~v~~~~-----~~~~~~~~afV~f~~ 62 (96)
T d1fjca_ 22 KNLSFNITEDELKEVFEDALEIRLVS-----QDGKSKGIAYIEFKS 62 (96)
T ss_dssp ESCCSSCCHHHHHHHHCSEEEECCEE-----ETTEEEEEEEEEESS
T ss_pred ECCCCCCCHHHHHHHHHHCCCCEEEE-----ECCCCCCEEEEEECC
T ss_conf 18998798999999997516560563-----437506688898689
No 78
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.66 E-value=0.48 Score=19.51 Aligned_cols=37 Identities=5% Similarity=-0.128 Sum_probs=29.4
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+.+++++.+.+ .++|.+.++++. ..|+|+||.+..
T Consensus 8 nLp~~~te~~L~~~F~~~G~i~~~~~~------~~rg~aFV~f~~ 46 (80)
T d2cqha1 8 NLSPAVTADDLRQLFGDRKLPLAGQVL------LKSGYAFVDYPD 46 (80)
T ss_dssp CCCTTCCHHHHHHHHHHTTCCCSSCEE------EETTEEEECCSC
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEEEEE------CCCCEEEEEECC
T ss_conf 999989999999999980968973786------126649999888
No 79
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=55.32 E-value=0.61 Score=18.98 Aligned_cols=35 Identities=6% Similarity=-0.251 Sum_probs=25.8
Q ss_pred CCCCCCCCCCCC-CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 988876445346-55687301206899888888888877789
Q 001496 676 GSDDANQESSWG-KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 676 LSFDANEDSVWe-se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
+|.+++++.+.. ++||+|.+++++ ..|+|+||.+.
T Consensus 12 ~p~~~~~~il~~F~~~G~I~~~~~~------~~~~~~fV~f~ 47 (81)
T d1wwha1 12 FPQASASYILLQFAQYGNILKHVMS------NTGNWMHIRYQ 47 (81)
T ss_dssp CCGGGHHHHHHHHHTTSCEEEEEEC------SSSSEEEEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHEEEEC------CCCCEEEEEEC
T ss_conf 8857779999999742011068954------89988999976
No 80
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.24 E-value=1.3 Score=17.34 Aligned_cols=36 Identities=8% Similarity=-0.028 Sum_probs=29.9
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
.|+.+++++.|.+ +++|.|..+++.- .++++||.+.
T Consensus 15 nLp~~~t~~~L~~~f~~~G~i~~v~~~~------~~~~afV~f~ 52 (88)
T d2cq1a1 15 KLPGEVTETEVIALGLPFGKVTNILMLK------GKNQAFLELA 52 (88)
T ss_dssp SCCTTCCHHHHHHTTTTTSCEEEEEEET------TTTEEEEEES
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCC------CCEEEEEEEC
T ss_conf 7998888999998875024222200023------4417999848
No 81
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.77 E-value=1 Score=17.82 Aligned_cols=36 Identities=6% Similarity=-0.251 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--55687301206899888888888877789
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
-|+++++++.|.+ +++|.+..+++ ..+|+|+||.+.
T Consensus 15 nLp~~~te~~l~~~F~~~g~i~~~~~------~~~rg~afV~f~ 52 (86)
T d2cpda1 15 NLMLSTSEEMIEKEFNNIKPGAVERV------KKIRDYAFVHFS 52 (86)
T ss_dssp SCCTTCCHHHHHHHHHTTSTTCEEEE------EECSSEEEEEES
T ss_pred CCCCCCCHHHHHHHHCCCCEEEEEEE------CCCCEEEEEEEC
T ss_conf 98997889999986206532655797------554279999869
No 82
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.60 E-value=1.4 Score=17.21 Aligned_cols=31 Identities=13% Similarity=-0.181 Sum_probs=24.1
Q ss_pred CCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 45346--556873012068998888888888777899
Q 001496 683 ESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 683 DSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
+.|.+ +++|.|..|+++.+ .++||+||.+..
T Consensus 34 edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~ 66 (99)
T d2dita1 34 EDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRD 66 (99)
T ss_dssp HHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSC
T ss_pred HHHHHHHCCCCCEEEEECCCC----CCCCEEEEEECC
T ss_conf 999987267660799963477----886479999898
No 83
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.11 E-value=6.4 Score=13.78 Aligned_cols=34 Identities=12% Similarity=-0.163 Sum_probs=25.5
Q ss_pred CCCCC--CCCCCCEEEECCCCCCCCCC--CCCCCCCCC
Q ss_conf 45346--55687301206899888888--888877789
Q 001496 683 ESSWG--KKQGNWNSGSRDGHQESSWG--KKSDWNSRS 716 (1066)
Q Consensus 683 DSVWe--se~GSI~SVRIPTDqESG~p--KGFGYV~~~ 716 (1066)
+.|.+ +++|.|.+|.||.+++...+ ++++||.+.
T Consensus 29 edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~ 66 (104)
T d1o0pa_ 29 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFT 66 (104)
T ss_dssp HHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEES
T ss_pred HHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEEC
T ss_conf 99999961668257789752377776577328999989
No 84
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.93 E-value=2.9 Score=15.52 Aligned_cols=36 Identities=11% Similarity=0.053 Sum_probs=26.6
Q ss_pred CCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8988876445346--556873012068998888888888777899
Q 001496 675 SGSDDANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRSE 717 (1066)
Q Consensus 675 SLSFDANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~e 717 (1066)
-|+++++++.|.+ ++|| +..+++ ...|+|+||.+..
T Consensus 12 nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~ 49 (88)
T d1wg1a_ 12 NLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLN 49 (88)
T ss_dssp SCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSC
T ss_pred CCCCCCCHHHHHHHHHHCC-CEEEEE------ECCCCCEEEEECC
T ss_conf 9998637578877788609-603530------1157714899889
No 85
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.32 E-value=7.9 Score=13.33 Aligned_cols=32 Identities=3% Similarity=-0.154 Sum_probs=25.1
Q ss_pred CCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 876445346--55687301206899888888888877789
Q 001496 679 DANQESSWG--KKQGNWNSGSRDGHQESSWGKKSDWNSRS 716 (1066)
Q Consensus 679 DANEDSVWe--se~GSI~SVRIPTDqESG~pKGFGYV~~~ 716 (1066)
.++++.+.+ +.||.|..+++.-+ |+++||.+.
T Consensus 20 ~~t~~eL~~lF~~fG~I~~i~i~~~------k~~afV~f~ 53 (89)
T d1x4da1 20 KNLRYQLLQLVEPFGVISNHLILNK------INEAFIEMA 53 (89)
T ss_dssp SSHHHHHHTTTGGGSCEEEEEECSS------SSCEEEEES
T ss_pred CCCHHHHHHHHHHHCCEEEEEEECC------CEEEEEEEC
T ss_conf 6789999999986387278876044------228999974
Done!