Query         001500
Match_columns 1066
No_of_seqs    203 out of 240
Neff          6.7 
Searched_HMMs 13730
Date          Tue Mar 26 16:18:38 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/001500.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_802-806//hhsearch_scop/001500hhsearch_scop 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1qqea_ a.118.8.1 (A:) Vesicul  95.2   0.064 4.7E-06   26.7  11.4   86  382-467   140-226 (290)
  2 d1tjca_ a.118.8.1 (A:) Prolyl   94.9   0.078 5.6E-06   26.2   8.7   70  403-472     8-78  (95)
  3 d1hh8a_ a.118.8.1 (A:) Neutrop  81.2       1 7.3E-05   18.7   9.9   87  382-468    51-148 (192)
  4 d1p5qa1 a.118.8.1 (A:258-427)   77.6     1.3 9.4E-05   17.9   8.1   60  403-468    65-124 (170)
  5 d1elra_ a.118.8.1 (A:) Hop {Hu  75.2     1.5 0.00011   17.5  10.6   86  384-469    21-108 (128)
  6 d1a17a_ a.118.8.1 (A:) Protein  72.6     1.7 0.00012   17.1   7.6   64  401-470    45-108 (159)
  7 d1w3ba_ a.118.8.1 (A:) O-GlcNA  72.5     1.7 0.00013   17.1   6.8   62  401-468   306-367 (388)
  8 d1elwa_ a.118.8.1 (A:) Hop {Hu  69.0       2 0.00015   16.6   8.8   81  384-470    20-101 (117)
  9 d2c2la1 a.118.8.1 (A:24-224) S  66.7     2.3 0.00017   16.3   7.8   53  382-434    53-106 (201)
 10 d1hz4a_ a.118.8.2 (A:) Transcr  59.9       3 0.00022   15.5  10.3   53  383-435   274-326 (366)
 11 d1nzna_ a.118.8.1 (A:) Mitocho  59.1     3.1 0.00023   15.4   6.3   50  384-433    53-105 (122)
 12 d1kt1a1 a.118.8.1 (A:254-421)   58.2     3.2 0.00023   15.3   6.9   62  403-470    67-128 (168)
 13 d1fcha_ a.118.8.1 (A:) Peroxin  43.8     5.3 0.00039   13.8   8.3   23   41-63     24-46  (323)
 14 d1ihga1 a.118.8.1 (A:197-365)   41.4     5.8 0.00042   13.5  13.2   64  401-470    78-141 (169)
 15 d2pqrb1 a.118.8.1 (B:5-128) Mi  38.7     6.3 0.00046   13.2   4.8   30  401-430    74-103 (124)
 16 d2fbna1 a.118.8.1 (A:22-174) P  34.6     7.3 0.00053   12.8   9.5   64  402-471    69-132 (153)
 17 d3er7a1 d.17.4.24 (A:5-122) Un  34.2     5.7 0.00042   13.6   0.8   21  979-999    60-87  (118)
 18 d1hxia_ a.118.8.1 (A:) Peroxin  32.0     8.1 0.00059   12.5   7.4   55  401-461    51-105 (112)
 19 d2hr2a1 a.118.8.8 (A:2-157) Hy  28.9     9.1 0.00066   12.2   9.9   66  401-466    56-126 (156)
 20 d1xnfa_ a.118.8.1 (A:) Lipopro  27.4     9.6  0.0007   12.0   7.8   30  403-432   212-241 (259)
 21 d1ouva_ a.118.18.1 (A:) Cystei  21.1      13 0.00092   11.2   4.1   27  403-429   181-211 (265)

No 1  
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.25  E-value=0.064  Score=26.73  Aligned_cols=86  Identities=15%  Similarity=0.017  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             999999998813981425898599999997418999999999999977731895017-9879999999999807741089
Q 001500          382 LTKGAANNYHCSWWKRHGVVLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGWQDL-LAEVLPNLAECQKILNDEAGYL  460 (1066)
Q Consensus       382 Lt~~Ai~~yk~~gR~Rsa~~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW~~L-~~~iL~~~a~C~k~L~~~~eYv  460 (1066)
                      ...+|+..+...+....+......+|..|...|+|++|..+|..+.......+.... ....+...+-|....++.....
T Consensus       140 ~~~~A~~l~~~~~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~A~  219 (290)
T d1qqea_         140 CYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAA  219 (290)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf             99999999873376033346889999999981739999999999998681332455569999999999999846599999


Q ss_pred             HHHHHHH
Q ss_conf             9999983
Q 001500          461 LSCVRLL  467 (1066)
Q Consensus       461 ~~~l~LL  467 (1066)
                      ...-+..
T Consensus       220 ~~~~~~~  226 (290)
T d1qqea_         220 RTLQEGQ  226 (290)
T ss_dssp             HHHHGGG
T ss_pred             HHHHHHH
T ss_conf             9999999


No 2  
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.94  E-value=0.078  Score=26.16  Aligned_cols=70  Identities=20%  Similarity=0.122  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
Q ss_conf             599999997418999999999999977731895-0179879999999999807741089999998302669
Q 001500          403 DGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGW-QDLLAEVLPNLAECQKILNDEAGYLLSCVRLLSLDKG  472 (1066)
Q Consensus       403 ~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW-~~L~~~iL~~~a~C~k~L~~~~eYv~~~l~LLs~~~~  472 (1066)
                      -.+||..+|+.|||.+|+..|..++.....+.. +.-...++..++.|..++++.++-+...-+.|...+.
T Consensus         8 c~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~   78 (95)
T d1tjca_           8 SFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE   78 (95)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             99999999997799999999999999886530147647899998726888657739888788779886929


No 3  
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.19  E-value=1  Score=18.66  Aligned_cols=87  Identities=17%  Similarity=0.057  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHH
Q ss_conf             9999999988139814-25898599999997418999999999999977731895----------017987999999999
Q 001500          382 LTKGAANNYHCSWWKR-HGVVLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGW----------QDLLAEVLPNLAECQ  450 (1066)
Q Consensus       382 Lt~~Ai~~yk~~gR~R-sa~~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW----------~~L~~~iL~~~a~C~  450 (1066)
                      -.+.|+..|.++=+.. .-......+|..|++.|+|+.|+..|..++.....+.+          ..-...++-..+.|.
T Consensus        51 ~~~~A~~~~~kAl~ldp~~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e~~~n~a~~~  130 (192)
T d1hh8a_          51 NMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMY  130 (192)
T ss_dssp             CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             91467878999999855234667889999985424999999999999867267367899866543630588999999999


Q ss_pred             HHHCCCCHHHHHHHHHHC
Q ss_conf             980774108999999830
Q 001500          451 KILNDEAGYLLSCVRLLS  468 (1066)
Q Consensus       451 k~L~~~~eYv~~~l~LLs  468 (1066)
                      ..+++.++-.....+.+.
T Consensus       131 ~~~~~~~~A~~~l~~A~~  148 (192)
T d1hh8a_         131 AKKEEWKKAEEQLALATS  148 (192)
T ss_dssp             HHTTCHHHHHHHHHHHHT
T ss_pred             HHCCCHHHHHHHHHHHHH
T ss_conf             997899999999999983


No 4  
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.62  E-value=1.3  Score=17.93  Aligned_cols=60  Identities=20%  Similarity=0.146  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
Q ss_conf             599999997418999999999999977731895017987999999999980774108999999830
Q 001500          403 DGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSCVRLLS  468 (1066)
Q Consensus       403 ~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW~~L~~~iL~~~a~C~k~L~~~~eYv~~~l~LLs  468 (1066)
                      ...+|..|++.|+|++|+.++..++..--.+      ...+...+.|+..+++.++-+...-+.+.
T Consensus        65 ~~nla~~y~k~~~~~~A~~~~~~al~~~p~~------~~a~~~~g~~~~~~g~~~~A~~~~~~al~  124 (170)
T d1p5qa1          65 HLNLAMCHLKLQAFSAAIESCNKALELDSNN------EKGLSRRGEAHLAVNDFELARADFQKVLQ  124 (170)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999886421101100000001002231------03467779999872229999999999997


No 5  
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.21  E-value=1.5  Score=17.50  Aligned_cols=86  Identities=14%  Similarity=0.078  Sum_probs=61.3

Q ss_pred             HHHHHHHHHCCCCC-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             99999988139814-25898599999997418999999999999977731-89501798799999999998077410899
Q 001500          384 KGAANNYHCSWWKR-HGVVLDGEIAAVCFKHGNYDQAAKSYEKVCALYSG-EGWQDLLAEVLPNLAECQKILNDEAGYLL  461 (1066)
Q Consensus       384 ~~Ai~~yk~~gR~R-sa~~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~-egW~~L~~~iL~~~a~C~k~L~~~~eYv~  461 (1066)
                      +.|+..|.++-+.. .-..+...+|..|++.|+|++|+..+..++..... ...+...+.++.....+...++..++-+.
T Consensus        21 ~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~  100 (128)
T d1elra_          21 DTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIH  100 (128)
T ss_dssp             HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf             99999999998849645899986889998818607789999999986801278898899999999999999388999999


Q ss_pred             HHHHHHCC
Q ss_conf             99998302
Q 001500          462 SCVRLLSL  469 (1066)
Q Consensus       462 ~~l~LLs~  469 (1066)
                      ..-+.++.
T Consensus       101 ~~~kal~~  108 (128)
T d1elra_         101 FYNKSLAE  108 (128)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHC
T ss_conf             99999845


No 6  
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.59  E-value=1.7  Score=17.08  Aligned_cols=64  Identities=11%  Similarity=0.044  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
Q ss_conf             9859999999741899999999999997773189501798799999999998077410899999983026
Q 001500          401 VLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSCVRLLSLD  470 (1066)
Q Consensus       401 ~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW~~L~~~iL~~~a~C~k~L~~~~eYv~~~l~LLs~~  470 (1066)
                      .....+|..|+..|++++|...|..++..-...      ...+..++.|+..+|+.++-+...-+.+...
T Consensus        45 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~------~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~  108 (159)
T d1a17a_          45 IYYGNRSLAYLRTECYGYALGDATRAIELDKKY------IKGYYRRAASNMALGKFRAALRDYETVVKVK  108 (159)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
T ss_conf             332456788874054212888899999875446------6877999999999499999999899998729


No 7  
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.50  E-value=1.7  Score=17.07  Aligned_cols=62  Identities=18%  Similarity=0.192  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
Q ss_conf             98599999997418999999999999977731895017987999999999980774108999999830
Q 001500          401 VLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSCVRLLS  468 (1066)
Q Consensus       401 ~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW~~L~~~iL~~~a~C~k~L~~~~eYv~~~l~LLs  468 (1066)
                      .....+|..++..|+|++|..+|..++..+...      ..++..++.|+.++|+.++-+...-+.+.
T Consensus       306 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~  367 (388)
T d1w3ba_         306 DSLNNLANIKREQGNIEEAVRLYRKALEVFPEF------AAAHSNLASVLQQQGKLQEALMHYKEAIR  367 (388)
T ss_dssp             HHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTC------HHHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             101579999998789999999999999868898------99999999999985999999999999997


No 8  
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.99  E-value=2  Score=16.56  Aligned_cols=81  Identities=20%  Similarity=0.116  Sum_probs=55.1

Q ss_pred             HHHHHHHHHCC-CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf             99999988139-81425898599999997418999999999999977731895017987999999999980774108999
Q 001500          384 KGAANNYHCSW-WKRHGVVLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLS  462 (1066)
Q Consensus       384 ~~Ai~~yk~~g-R~Rsa~~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW~~L~~~iL~~~a~C~k~L~~~~eYv~~  462 (1066)
                      +.|+..|..+= .-..--.+...+|..|+.+|+|++|+..+..++......      ...+..++.|+..+++.++-+..
T Consensus        20 ~eAi~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~g~~~~~~~~~~~A~~~   93 (117)
T d1elwa_          20 DDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW------GKGYSRKAAALEFLNRFEEAKRT   93 (117)
T ss_dssp             HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCH------HHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             999999999886199601343000110110000112100134677740220------26778899999981279999999


Q ss_pred             HHHHHCCC
Q ss_conf             99983026
Q 001500          463 CVRLLSLD  470 (1066)
Q Consensus       463 ~l~LLs~~  470 (1066)
                      .-+.+...
T Consensus        94 ~~~a~~~~  101 (117)
T d1elwa_          94 YEEGLKHE  101 (117)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHHHC
T ss_conf             99999849


No 9  
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=66.69  E-value=2.3  Score=16.26  Aligned_cols=53  Identities=11%  Similarity=0.082  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999988139814-2589859999999741899999999999997773189
Q 001500          382 LTKGAANNYHCSWWKR-HGVVLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGEG  434 (1066)
Q Consensus       382 Lt~~Ai~~yk~~gR~R-sa~~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~eg  434 (1066)
                      -.+.|+..|.++=... .-......+|..|+..|+|++|+..|..++.......
T Consensus        53 ~~~~Ai~~~~~al~l~p~~~~a~~~lg~~~~~l~~~~~A~~~~~~al~l~p~~~  106 (201)
T d2c2la1          53 QPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQR  106 (201)
T ss_dssp             CHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
T ss_conf             000124788888871887389999999999987999999999999987495567


No 10 
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=59.94  E-value=3  Score=15.45  Aligned_cols=53  Identities=9%  Similarity=-0.009  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99999998813981425898599999997418999999999999977731895
Q 001500          383 TKGAANNYHCSWWKRHGVVLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGW  435 (1066)
Q Consensus       383 t~~Ai~~yk~~gR~Rsa~~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW  435 (1066)
                      .+.++......+..........-+|..|++.|++++|...|..++..-...|.
T Consensus       274 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~~~~  326 (366)
T d1hz4a_         274 LEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGF  326 (366)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999887642667479999999999999878999999999999997653182


No 11 
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.06  E-value=3.1  Score=15.35  Aligned_cols=50  Identities=10%  Similarity=-0.083  Sum_probs=34.3

Q ss_pred             HHHHHHHHHCCCCC-HHH--HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             99999988139814-258--985999999974189999999999999777318
Q 001500          384 KGAANNYHCSWWKR-HGV--VLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGE  433 (1066)
Q Consensus       384 ~~Ai~~yk~~gR~R-sa~--~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~e  433 (1066)
                      +.||..|..+-+.. .-.  -....+|..|++.|+|++|..+|..++..--.+
T Consensus        53 ~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~  105 (122)
T d1nzna_          53 RKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN  105 (122)
T ss_dssp             HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99999999998606993199999999999999731699999999999769098


No 12 
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=58.24  E-value=3.2  Score=15.26  Aligned_cols=62  Identities=19%  Similarity=0.185  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
Q ss_conf             59999999741899999999999997773189501798799999999998077410899999983026
Q 001500          403 DGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSCVRLLSLD  470 (1066)
Q Consensus       403 ~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW~~L~~~iL~~~a~C~k~L~~~~eYv~~~l~LLs~~  470 (1066)
                      ...+|.-|+..|+|.+|+.++..++..-...      ...+...+.|+..+++.++-+...-+.+..+
T Consensus        67 ~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~~------~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~  128 (168)
T d1kt1a1          67 FLNLAMCYLKLREYTKAVECCDKALGLDSAN------EKGLYRRGEAQLLMNEFESAKGDFEKVLEVN  128 (168)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCH------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf             9849999877622011000223222013104------8899988999988278999999999999859


No 13 
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.82  E-value=5.3  Score=13.77  Aligned_cols=23  Identities=4%  Similarity=-0.149  Sum_probs=17.3

Q ss_pred             HHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf             99999998022079998999999
Q 001500           41 SLAFMFEMAHLHEDALREYDELE   63 (1066)
Q Consensus        41 ~LA~lfe~~~L~eDAL~qYdELe   63 (1066)
                      +.+..+...|-+++|+..|++.-
T Consensus        24 ~~g~~~~~~g~~~~A~~~~~~al   46 (323)
T d1fcha_          24 EEGLRRLQEGDLPNAVLLFEAAV   46 (323)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             99999998599999999999999


No 14 
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=41.43  E-value=5.8  Score=13.52  Aligned_cols=64  Identities=14%  Similarity=0.057  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
Q ss_conf             9859999999741899999999999997773189501798799999999998077410899999983026
Q 001500          401 VLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSCVRLLSLD  470 (1066)
Q Consensus       401 ~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW~~L~~~iL~~~a~C~k~L~~~~eYv~~~l~LLs~~  470 (1066)
                      .+...+|..|++.|+|++|+..+..++..-...      ...+...+.|+..+++.++-+...-+.+..+
T Consensus        78 ~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~------~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~  141 (169)
T d1ihga1          78 SCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN------TKALYRRAQGWQGLKEYDQALADLKKAQEIA  141 (169)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf             999989999986402101366655443100022------3677769999998047999999999999859


No 15 
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.69  E-value=6.3  Score=13.25  Aligned_cols=30  Identities=17%  Similarity=0.211  Sum_probs=26.0

Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             985999999974189999999999999777
Q 001500          401 VLDGEIAAVCFKHGNYDQAAKSYEKVCALY  430 (1066)
Q Consensus       401 ~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y  430 (1066)
                      -...-||.-||..|||++|..++..++..=
T Consensus        74 d~lY~Lav~yyklgdy~~A~~~~~~~L~ie  103 (124)
T d2pqrb1          74 ECLYYLTIGCYKLGEYSMAKRYVDTLFEHE  103 (124)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             999999999998732999999999998239


No 16 
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=34.64  E-value=7.3  Score=12.83  Aligned_cols=64  Identities=16%  Similarity=0.095  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf             8599999997418999999999999977731895017987999999999980774108999999830266
Q 001500          402 LDGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLLSCVRLLSLDK  471 (1066)
Q Consensus       402 L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW~~L~~~iL~~~a~C~k~L~~~~eYv~~~l~LLs~~~  471 (1066)
                      +...+|..|+++|+|+.|+.++..++..-...      ...+-..+.|+..+++.++-+...-+.+...+
T Consensus        69 ~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~~------~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P  132 (153)
T d2fbna1          69 CNLNLATCYNKNKDYPKAIDHASKVLKIDKNN------VKALYKLGVANMYFGFLEEAKENLYKAASLNP  132 (153)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHH------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
T ss_conf             99619999998465301110100010000000------12467768999996899999999999998298


No 17 
>d3er7a1 d.17.4.24 (A:5-122) Uncharacterized protein Exig0174 {Exiguobacterium sibiricum 255-15 [TaxId: 262543]}
Probab=34.19  E-value=5.7  Score=13.55  Aligned_cols=21  Identities=14%  Similarity=0.514  Sum_probs=12.5

Q ss_pred             CEEEEE---EECCC----CCEEEEECCE
Q ss_conf             507999---81289----9489975012
Q 001500          979 DEVLYE---VNANA----DNWMIAGRKR  999 (1066)
Q Consensus       979 ~~l~ye---v~~~s----~~wmvsGrk~  999 (1066)
                      +.-||+   +.+++    .+|+||||.+
T Consensus        60 ~KHlwd~~~~~E~~dt~et~WaV~gk~~   87 (118)
T d3er7a1          60 IKHMYAGWVPSETGDTMETRWAVCGKSA   87 (118)
T ss_dssp             EEEEECCCEECSSTTCEEEEEEEEEEET
T ss_pred             HHHHHCCCEECCCCCEEEEEEEEEEEEC
T ss_conf             7877615334245671123057786506


No 18 
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=32.02  E-value=8.1  Score=12.55  Aligned_cols=55  Identities=11%  Similarity=-0.033  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             9859999999741899999999999997773189501798799999999998077410899
Q 001500          401 VLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGEGWQDLLAEVLPNLAECQKILNDEAGYLL  461 (1066)
Q Consensus       401 ~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~egW~~L~~~iL~~~a~C~k~L~~~~eYv~  461 (1066)
                      .....+|..+.+.|++++|...|..++..--..      ...+..++.|+...|+.++-+.
T Consensus        51 ~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~------~~a~~~la~~y~~~g~~~~A~~  105 (112)
T d1hxia_          51 EAWRSLGLTQAENEKDGLAIIALNHARMLDPKD------IAVHAALAVSHTNEHNANAALA  105 (112)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC------CCCHHHHHHHHHHCCCHHHHHH
T ss_conf             012335456410125877410000011111100------0003789999999789999999


No 19 
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=28.87  E-value=9.1  Score=12.20  Aligned_cols=66  Identities=17%  Similarity=0.098  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCHH---HHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             985999999974189999999999999777318--9501---79879999999999807741089999998
Q 001500          401 VLDGEIAAVCFKHGNYDQAAKSYEKVCALYSGE--GWQD---LLAEVLPNLAECQKILNDEAGYLLSCVRL  466 (1066)
Q Consensus       401 ~L~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~e--gW~~---L~~~iL~~~a~C~k~L~~~~eYv~~~l~L  466 (1066)
                      .+...+|..|+.+|+|++|+..++.++..+...  .|..   ....++.....|+..+++.++-+...-+.
T Consensus        56 ~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~A  126 (156)
T d2hr2a1          56 FCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKV  126 (156)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999828630015766435530431002455443112787752699999888888889999999


No 20 
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=27.44  E-value=9.6  Score=12.03  Aligned_cols=30  Identities=13%  Similarity=0.112  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             599999997418999999999999977731
Q 001500          403 DGEIAAVCFKHGNYDQAAKSYEKVCALYSG  432 (1066)
Q Consensus       403 ~~dLA~lyy~~gdY~kA~~ll~~~~~~Y~~  432 (1066)
                      ..-||..|...|+|++|..+|..++..-..
T Consensus       212 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~  241 (259)
T d1xnfa_         212 NFYLGKYYLSLGDLDSATALFKLAVANNVH  241 (259)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHTTCCT
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
T ss_conf             999999999878999999999999983997


No 21 
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=21.10  E-value=13  Score=11.24  Aligned_cols=27  Identities=22%  Similarity=0.379  Sum_probs=16.5

Q ss_pred             HHHHHHHHHH----CCCHHHHHHHHHHHHHH
Q ss_conf             5999999974----18999999999999977
Q 001500          403 DGEIAAVCFK----HGNYDQAAKSYEKVCAL  429 (1066)
Q Consensus       403 ~~dLA~lyy~----~gdY~kA~~ll~~~~~~  429 (1066)
                      ...+|.+|+.    .+|+.+|..+|..++..
T Consensus       181 ~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~  211 (265)
T d1ouva_         181 CFNAGNMYHHGEGATKNFKEALARYSKACEL  211 (265)
T ss_dssp             HHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT
T ss_pred             CCCHHHHCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             2211312126765431034445467665303


Done!