BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001501
(1066 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359474491|ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera]
gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera]
Length = 1267
Score = 1572 bits (4071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 762/800 (95%), Positives = 780/800 (97%), Gaps = 5/800 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDNVTIRWDIGLNKKR+AYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV
Sbjct: 323 MMKESQSKDNVTIRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 382
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPVD+NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 383 GHVIKLTAQEEVALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 442
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQ+PISLIQGPPGTGKT
Sbjct: 443 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKT 502
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 503 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 562
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC
Sbjct: 563 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 622
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 623 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 682
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF
Sbjct: 683 AGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 742
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 743 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 802
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 803 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 862
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 863 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 922
Query: 840 KIYNDRRLFFGAGPGIVPND----ISTSNPNADRRGSRARG-YMPPGPPNGTHKPGLHPA 894
KIYNDRRLFFG GPGIVPND +++S+P+ADRR SR RG YMP GPPNGTHKPG+HPA
Sbjct: 923 KIYNDRRLFFGGGPGIVPNDNFGTVTSSSPSADRRSSRGRGSYMPSGPPNGTHKPGVHPA 982
Query: 895 GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGS 954
GFPMPRVPLPPF GGPPSQPYAIP+RGAVHGPVGAV HVPPPGSRGFGAGRG+AGAPIGS
Sbjct: 983 GFPMPRVPLPPFHGGPPSQPYAIPTRGAVHGPVGAVPHVPPPGSRGFGAGRGNAGAPIGS 1042
Query: 955 HLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFS 1014
HL HQQ +QQ +G +GSTFNFP+LEN NSQPSVGGPL+QPGFV NMPVQGPSQTFRDGFS
Sbjct: 1043 HLPHQQGSQQAVGNLGSTFNFPALENPNSQPSVGGPLSQPGFVTNMPVQGPSQTFRDGFS 1102
Query: 1015 VGSMSQDFLGDDFKSQGSHV 1034
+G MSQDFLGDDFKSQGSHV
Sbjct: 1103 IGGMSQDFLGDDFKSQGSHV 1122
Score = 328 bits (842), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 172/261 (65%), Positives = 195/261 (74%), Gaps = 36/261 (13%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFRSPV---SWPTPSDSLSVD 57
MDSQ NL++TASQPDTG DAYTF+EFNTQGE DFD YP+FR P+ +WPTPSDS+S D
Sbjct: 1 MDSQPNNLYDTASQPDTGNDAYTFIEFNTQGE-DFD-YPDFRDPIRPSAWPTPSDSIS-D 57
Query: 58 PTTPVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEG 117
+ A+P SA P S AT + G+++SS + + G
Sbjct: 58 AADHQSDASPV---SAAPGS----------------ATKARGAAGSSSSSQAAVDALAAG 98
Query: 118 MAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
M+GL+FEETGDD + +EYGK DFTEHACRYCGV NPACVVRCNVPSCRKWFCNSRGNTSG
Sbjct: 99 MSGLNFEETGDD-DNYEYGKGDFTEHACRYCGVQNPACVVRCNVPSCRKWFCNSRGNTSG 157
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC
Sbjct: 158 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 217
Query: 238 L--NMMKESQSKDNVTIRWDI 256
L N +K+ + WD+
Sbjct: 218 LSVNALKD--------MNWDL 230
>gi|255575790|ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
Length = 1280
Score = 1565 bits (4051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 759/800 (94%), Positives = 777/800 (97%), Gaps = 5/800 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDNVTIRWDIGLNKKR+AYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV
Sbjct: 345 MMKESQSKDNVTIRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 404
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 405 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 464
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q VRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT
Sbjct: 465 YIYHHLLGHEVENQNVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 524
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 525 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 584
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC
Sbjct: 585 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 644
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV+LVGDHCQLGPVIMCKKAAR
Sbjct: 645 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVILVGDHCQLGPVIMCKKAAR 704
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVT+NERQSSGIDF
Sbjct: 705 AGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDF 764
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 765 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 824
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 825 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 884
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 885 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 944
Query: 840 KIYNDRRLFFGAGPGIVPNDI----STSNPNADRRGSRARG-YMPPGPPNGTHKPGLHPA 894
KIYNDRRLFFG GPGIV ND ++S+PN+DRR SR RG YMPPGPPNGTHKP +HP
Sbjct: 945 KIYNDRRLFFGGGPGIVSNDNFGSGASSSPNSDRRSSRGRGSYMPPGPPNGTHKPSVHPT 1004
Query: 895 GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGS 954
GFPMPRVP+PPF GGPPSQPYAIP+RGAVHGPVGAV HVP PGSRGFGAGRG+AGAPIGS
Sbjct: 1005 GFPMPRVPVPPFHGGPPSQPYAIPTRGAVHGPVGAVPHVPSPGSRGFGAGRGNAGAPIGS 1064
Query: 955 HLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFS 1014
HL HQQ+TQQ IG +GSTFNFP+LEN NSQPSVGGPL+QPG+VNNMPVQGPSQ+FRDGFS
Sbjct: 1065 HLSHQQSTQQTIGNMGSTFNFPALENPNSQPSVGGPLSQPGYVNNMPVQGPSQSFRDGFS 1124
Query: 1015 VGSMSQDFLGDDFKSQGSHV 1034
VG MSQDFLGDDFKSQGSHV
Sbjct: 1125 VGGMSQDFLGDDFKSQGSHV 1144
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 185/268 (69%), Positives = 207/268 (77%), Gaps = 28/268 (10%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLS----- 55
MDS+Q+NL+ETASQPDTGTDAYTFLEFNTQGESDFD YPEFRSPV+WPTPSDSL+
Sbjct: 1 MDSEQSNLYETASQPDTGTDAYTFLEFNTQGESDFD-YPEFRSPVAWPTPSDSLAAATSS 59
Query: 56 ---VDPTTPVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSS----PSKRGANNSSN 108
VDPT SD R A A+ HH+ + + + SS + RG +NS
Sbjct: 60 SSAVDPTA-------SDHRGAAAAATSSDHHSADSAAAASSPVSSSSSSKAMRGGSNSQG 112
Query: 109 TSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWF 168
IV M GL+FEETGD+ +G+E+GK DFTEHACRYCGVSNPACVVRCN+PSCRKWF
Sbjct: 113 V-VEGIVSAMGGLNFEETGDE-DGYEFGKGDFTEHACRYCGVSNPACVVRCNIPSCRKWF 170
Query: 169 CNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESV 228
CNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESV
Sbjct: 171 CNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESV 230
Query: 229 VVLLCREPCLNMMKESQSKDNVTIRWDI 256
VVLLCREPCLN+ + KD + WD+
Sbjct: 231 VVLLCREPCLNV---NALKD---MNWDL 252
>gi|356497066|ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine max]
Length = 1266
Score = 1518 bits (3929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 741/807 (91%), Positives = 761/807 (94%), Gaps = 18/807 (2%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV
Sbjct: 332 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 391
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPVD+NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 392 GHVIKLTAQEEVALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 451
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVEVQMVRN LPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT
Sbjct: 452 YIYHHLLGHEVEVQMVRNALPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 511
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAA+VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 512 VTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 571
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTS+KSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC
Sbjct: 572 TLHYQVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 631
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 632 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 691
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHP LSEFPSNSFYEGTLQNGVT+NER+SSGIDF
Sbjct: 692 AGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERKSSGIDF 751
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL+SGVVPSQIGVITPYE
Sbjct: 752 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYE 811
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 812 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 871
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 872 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 931
Query: 840 KIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRA------------RGYMPPGPPNGTH 887
KIYN+RRLF+G GPGI ND N GS A Y+PPGPPNGTH
Sbjct: 932 KIYNERRLFYGGGPGIAAND------NFGSVGSGAGTSSDRRSSRGRGSYIPPGPPNGTH 985
Query: 888 KPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGS 947
KPG+HPAG+P+PRVPLPPF GGP SQPYAIPSRGAVHGPVGAV HVP PGSRGFGAGRG+
Sbjct: 986 KPGVHPAGYPVPRVPLPPFHGGPQSQPYAIPSRGAVHGPVGAVPHVPSPGSRGFGAGRGN 1045
Query: 948 AGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQ 1007
+GAPIG+HL HQQ TQQPIG IGSTFNFP+LEN NSQPSVGGP +QPGF NNMPVQG Q
Sbjct: 1046 SGAPIGNHLPHQQGTQQPIGNIGSTFNFPALENPNSQPSVGGPSSQPGFANNMPVQGAGQ 1105
Query: 1008 TFRDGFSVGSMSQDFLGDDFKSQGSHV 1034
+FRD FS+ MSQDFLGDDFKSQGSHV
Sbjct: 1106 SFRDQFSMPGMSQDFLGDDFKSQGSHV 1132
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/266 (68%), Positives = 199/266 (74%), Gaps = 37/266 (13%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFR----SPVSWPTPSDSLSV 56
MDSQQ NLFETASQPDTG DAYTFLEFNTQGE DFD YPEFR SPV+WPTPSDSL+
Sbjct: 1 MDSQQNNLFETASQPDTGNDAYTFLEFNTQGE-DFD-YPEFRDPIRSPVAWPTPSDSLA- 57
Query: 57 DPTTPVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVE 116
DP R SDH S A S +K G + S ++SQ+V+
Sbjct: 58 DPL----------ERGGGGGSDHQSDA-----SPVSVAPGSATKGGRSGSGGGNSSQMVD 102
Query: 117 ----GMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSR 172
GM+GL+FE+TGDD + +EYGK DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSR
Sbjct: 103 ALAAGMSGLNFEDTGDD-DNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSR 161
Query: 173 GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLL 232
GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLL
Sbjct: 162 GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLL 221
Query: 233 CREPCL--NMMKESQSKDNVTIRWDI 256
CREPCL N +K+ + WD+
Sbjct: 222 CREPCLSVNALKD--------MNWDL 239
>gi|449511522|ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 1517 bits (3927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 738/800 (92%), Positives = 764/800 (95%), Gaps = 6/800 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDNVT+RWDIGLNKKR+AYFVFPKEDNELRLVPGDELRLRYSGDAAHPAW SV
Sbjct: 332 MMKESQSKDNVTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSV 391
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPVD+ HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 392 GHVIKLTAQEEVALELRASQGVPVDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 451
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQ+PISLIQGPPGTGKT
Sbjct: 452 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKT 511
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 512 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 571
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSE+SELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC
Sbjct: 572 TLHYQVRHLDTSERSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 631
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLGAKQ VLVGDHCQLGPVIMCKKAAR
Sbjct: 632 VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAAR 691
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS+GIDF
Sbjct: 692 AGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDF 751
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 752 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 811
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 812 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 871
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSM+QFQKPK
Sbjct: 872 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPK 931
Query: 840 KIYNDRRLFFGAGPGIVPND----ISTSNPNADRRGSRARG-YMPPGPPNGTHKPGLHPA 894
KIYNDRRLFF GPG+VPND ++ S PNADRR SR RG Y PP PNG KPG+H +
Sbjct: 932 KIYNDRRLFFAGGPGVVPNDNFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHAS 991
Query: 895 GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGS 954
G+PMPRVPLP F GGPP QPYAIP+RGAVHGPVGAV HVP PGSRGFGAGRG+AGAPIGS
Sbjct: 992 GYPMPRVPLPSFHGGPP-QPYAIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNAGAPIGS 1050
Query: 955 HLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFS 1014
L +QQ +QQ IG +GSTFNFP LE+ NSQPSVGGPL+Q GFVNNMPVQ P+QTFRDG+S
Sbjct: 1051 QLPNQQGSQQNIGNLGSTFNFPGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYS 1110
Query: 1015 VGSMSQDFLGDDFKSQGSHV 1034
+G +SQDFLGDDFKSQGSHV
Sbjct: 1111 MGGISQDFLGDDFKSQGSHV 1130
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/271 (63%), Positives = 195/271 (71%), Gaps = 47/271 (17%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFRSP----VSWPTPSDSLSV 56
MDSQQ NLFETASQPDT DAYTFLEFNTQGE DFD YPEFR P V+WPTPSDSL+
Sbjct: 1 MDSQQNNLFETASQPDTANDAYTFLEFNTQGE-DFD-YPEFRDPIRPPVAWPTPSDSLA- 57
Query: 57 DPTTPVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSK-----RGANNSSNTST 111
D SDH SD+ +++P G + +
Sbjct: 58 ------------DHTDRGGGSDHQ--------SDASPVSAAPGSATKGRTGGGSGNTGGN 97
Query: 112 SQIVE----GMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKW 167
+Q+V+ GM+GL+FE+TGDD + +E+GK +FTEHACRYCGVSNPACVVRCNVPSCRKW
Sbjct: 98 NQMVDALAAGMSGLTFEDTGDD-DNYEFGKGNFTEHACRYCGVSNPACVVRCNVPSCRKW 156
Query: 168 FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTES 227
FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTES
Sbjct: 157 FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTES 216
Query: 228 VVVLLCREPCL--NMMKESQSKDNVTIRWDI 256
VVVLLCREPCL N +K+ + WD+
Sbjct: 217 VVVLLCREPCLSVNALKD--------MNWDL 239
>gi|357482277|ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago truncatula]
gi|355512759|gb|AES94382.1| Regulator of nonsense transcripts-like protein [Medicago truncatula]
Length = 1253
Score = 1505 bits (3897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 736/798 (92%), Positives = 760/798 (95%), Gaps = 7/798 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDN+TIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHP+WQSV
Sbjct: 326 MMKESQSKDNLTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPSWQSV 385
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPVD+NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 386 GHVIKLTAQEEVALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 445
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVEVQMVRN LPRRFGAPGLPELNASQV+AVKSVLQRPISLIQGPPGTGKT
Sbjct: 446 YIYHHLLGHEVEVQMVRNALPRRFGAPGLPELNASQVYAVKSVLQRPISLIQGPPGTGKT 505
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAA+VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 506 VTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 565
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTS+KSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC
Sbjct: 566 TLHYQVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 625
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 626 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 685
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHP LSEFPSNSFYEGTLQNGVT+NERQS+GIDF
Sbjct: 686 AGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSTGIDF 745
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL+SGVVPSQIGVITPYE
Sbjct: 746 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYE 805
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 806 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 865
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 866 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 925
Query: 840 KIYNDRRLFFGAGPGIVPNDI--STSNPNADRRGSRARG-YMPPGPPNGTHKPGLHPAGF 896
KIYN+RRLF+G GPG+ ND S + ++DRR R RG Y+P GPPNG HKPGLHPAGF
Sbjct: 926 KIYNERRLFYGGGPGVAANDNFGSGAGTSSDRRTGRGRGSYIPSGPPNGNHKPGLHPAGF 985
Query: 897 PMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSHL 956
P+ RVPLPPF GGP SQPYAIPSRGAVHGPVGAV HVP PGSRGFGAGRG++GA IG+HL
Sbjct: 986 PVQRVPLPPFHGGPQSQPYAIPSRGAVHGPVGAVPHVPSPGSRGFGAGRGNSGASIGNHL 1045
Query: 957 QHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG 1016
H Q TQ P IGS FNFP+LEN NSQPSVGGPL+QPGF NNMPVQG Q+FRD FSV
Sbjct: 1046 PH-QGTQPP---IGSAFNFPALENPNSQPSVGGPLSQPGFANNMPVQGAGQSFRDQFSVP 1101
Query: 1017 SMSQDFLGDDFKSQGSHV 1034
MSQDFLGDDFKSQGSHV
Sbjct: 1102 GMSQDFLGDDFKSQGSHV 1119
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/266 (67%), Positives = 203/266 (76%), Gaps = 43/266 (16%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFR----SPVSWPTPSDSLSV 56
MDS Q NLF+TASQPDTGTDAYTFLEFNTQGE DFD YP+FR SPV+WPTPSDSL+
Sbjct: 1 MDSTQNNLFDTASQPDTGTDAYTFLEFNTQGE-DFD-YPDFRDPIRSPVAWPTPSDSLA- 57
Query: 57 DPTTPVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVE 116
DP S SDHH SD+ +++P+K G + + S SQ+V+
Sbjct: 58 DP-------------SGSAGSDHH--------SDASPVSAAPTKGGRSGGGSGSGSQMVD 96
Query: 117 ----GMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSR 172
GM+GL+FE+TGDD + +E+GK DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSR
Sbjct: 97 SLASGMSGLNFEDTGDD-DNYEFGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSR 155
Query: 173 GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLL 232
GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLL
Sbjct: 156 GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLL 215
Query: 233 CREPCL--NMMKESQSKDNVTIRWDI 256
CREPCL N +K+ + WD+
Sbjct: 216 CREPCLSVNALKD--------MNWDL 233
>gi|356541331|ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine max]
Length = 1270
Score = 1494 bits (3868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 738/809 (91%), Positives = 758/809 (93%), Gaps = 23/809 (2%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV
Sbjct: 335 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 394
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRA+QGVPVD+NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 395 GHVIKLTAQEEVALELRANQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 454
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVEVQMVRN LPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT
Sbjct: 455 YIYHHLLGHEVEVQMVRNALPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 514
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAA+VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 515 VTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 574
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTS+KSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC
Sbjct: 575 TLHYQVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 634
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 635 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 694
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHP LSEFPSNSFYEGTLQNGVT+NERQSSGIDF
Sbjct: 695 AGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDF 754
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL+SGVVPSQIGVITPYE
Sbjct: 755 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYE 814
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 815 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 874
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 875 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 934
Query: 840 KIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRA------------RGYMPPGPPNGTH 887
KIYN+RRLF+G GPGI ND N GS A Y+PPGPPNGTH
Sbjct: 935 KIYNERRLFYGGGPGIASND------NFGNVGSGAGTSSDRRSSRGRGSYIPPGPPNGTH 988
Query: 888 KPGLHPAGF-PMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRG 946
KPG+HPAG+ P+PRVPLP F GGP SQPYAIPSRGAVHGPVGAV HVP PGSRGFGAGRG
Sbjct: 989 KPGVHPAGYPPVPRVPLPHFHGGPQSQPYAIPSRGAVHGPVGAVPHVPSPGSRGFGAGRG 1048
Query: 947 SAGA-PIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGP 1005
++GA PIG+HL HQQ TQQP IGSTFNFP+LEN NSQPSVGGPL+QPGF NNM VQG
Sbjct: 1049 NSGAPPIGNHLPHQQGTQQP---IGSTFNFPALENPNSQPSVGGPLSQPGFANNMHVQGA 1105
Query: 1006 SQTFRDGFSVGSMSQDFLGDDFKSQGSHV 1034
Q+FRD FS+ MSQDFLGDDFKSQGSHV
Sbjct: 1106 GQSFRDQFSMPGMSQDFLGDDFKSQGSHV 1134
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/263 (67%), Positives = 193/263 (73%), Gaps = 28/263 (10%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFR----SPVSWPTPSDSLSV 56
MDSQQ NLFETASQPDTG DAYTFLEFNTQGE DFD YPEFR SPV+WPTPSDSL
Sbjct: 1 MDSQQNNLFETASQPDTGNDAYTFLEFNTQGE-DFD-YPEFRDPIRSPVAWPTPSDSL-- 56
Query: 57 DPTTPVTPATPSD-SRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIV 115
A PS+ SDH + + A S G +S+ +
Sbjct: 57 --------ADPSERGGGGGGGSDHQSDTSPVSAAPGSATKGGRSGSGGGGNSSQMVDALA 108
Query: 116 EGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 175
GM+GL+FE+TGDD + +EYGK DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT
Sbjct: 109 AGMSGLNFEDTGDD-DNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 167
Query: 176 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE
Sbjct: 168 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 227
Query: 236 PCL--NMMKESQSKDNVTIRWDI 256
PCL N +K+ + WD+
Sbjct: 228 PCLSVNALKD--------MNWDL 242
>gi|224138824|ref|XP_002326699.1| predicted protein [Populus trichocarpa]
gi|222834021|gb|EEE72498.1| predicted protein [Populus trichocarpa]
Length = 1256
Score = 1494 bits (3867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 735/802 (91%), Positives = 756/802 (94%), Gaps = 20/802 (2%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV
Sbjct: 331 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 390
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPVD+NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 391 GHVIKLTAQEEVALELRASQGVPVDMNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 450
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q VR+ LPRRFGAPGLPELNASQV AVK+VLQ+PISLIQGPPGTGKT
Sbjct: 451 YIYHHLLGHEVENQTVRSALPRRFGAPGLPELNASQVLAVKNVLQKPISLIQGPPGTGKT 510
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIV LVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 511 VTSAAIV-----------LVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 559
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC
Sbjct: 560 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 619
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVV VGDHCQLGPVIMCKKAAR
Sbjct: 620 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVFVGDHCQLGPVIMCKKAAR 679
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVT+NERQSSGIDF
Sbjct: 680 AGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDF 739
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ--IGVITP 717
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ IGVITP
Sbjct: 740 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQACIGVITP 799
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND
Sbjct: 800 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 859
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQK
Sbjct: 860 PRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQK 919
Query: 838 PKKIYNDRRLFFGAGPGIVPND----ISTSNPNADRRGSRARG-YMPPGPPNGTHKPGLH 892
PKKIYNDRRLFFG GPGI+PND +++++PNADRR SRARG YMPP PPNGTHKPG H
Sbjct: 920 PKKIYNDRRLFFGGGPGIIPNDNFGSVASASPNADRRNSRARGSYMPPAPPNGTHKPGAH 979
Query: 893 PAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPI 952
PAGFPMPRVP+PPF G PPSQPYAIP+RGAVHGP+GAV VP PG RGFGAGRG+AGAPI
Sbjct: 980 PAGFPMPRVPIPPFHGDPPSQPYAIPTRGAVHGPIGAVPQVPQPGIRGFGAGRGNAGAPI 1039
Query: 953 GSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDG 1012
GSHL HQQ TQQ IG IGS FNF SLEN NSQPSVG L+QPG+ NN+PVQG SQTFRDG
Sbjct: 1040 GSHLPHQQGTQQGIGNIGS-FNFSSLENPNSQPSVGSALSQPGY-NNIPVQGSSQTFRDG 1097
Query: 1013 FSVGSMSQDFLGDDFKSQGSHV 1034
FS+G MSQ+FLGDDFKSQGSHV
Sbjct: 1098 FSMGGMSQEFLGDDFKSQGSHV 1119
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/261 (71%), Positives = 208/261 (79%), Gaps = 28/261 (10%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSL-----S 55
MD+Q +L+ETASQPDT TDAYTFLEFNTQGESDFD YPEFRSPV+WPTPSDSL S
Sbjct: 1 MDAQDNSLYETASQPDTATDAYTFLEFNTQGESDFD-YPEFRSPVTWPTPSDSLAATSSS 59
Query: 56 VDPTTPVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIV 115
VDPT+ SD R+A SDHH SDS AA+ S ++ GAN+ + +V
Sbjct: 60 VDPTS-------SDHRAAASNSDHH--------SDSPAASKSAARGGANSGTQGVVEGLV 104
Query: 116 EGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 175
M GL+FEETGDD +G+++GK DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT
Sbjct: 105 ASMGGLNFEETGDD-DGYDFGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 163
Query: 176 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE
Sbjct: 164 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 223
Query: 236 PCLNMMKESQSKDNVTIRWDI 256
PCLN+ + KD + WD+
Sbjct: 224 PCLNV---NALKD---MNWDL 238
>gi|224126379|ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|222870248|gb|EEF07379.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 1455 bits (3766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/800 (89%), Positives = 742/800 (92%), Gaps = 35/800 (4%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDNVTIRWDIGLNKKRVAYFVFPK DNELRLVPGDELRLRYSGDAAHPAWQSV
Sbjct: 336 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPK-DNELRLVPGDELRLRYSGDAAHPAWQSV 394
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHV LTAQEEVALELRASQGVPVD+NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 395 GHV--LTAQEEVALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 452
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q VRN LPRRFGAPGLPELNASQV AVK+VLQ+PISLIQGPPGTGKT
Sbjct: 453 YIYHHLLGHEVENQTVRNALPRRFGAPGLPELNASQVLAVKNVLQKPISLIQGPPGTGKT 512
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 513 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 572
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC
Sbjct: 573 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 632
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
GAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLGAKQVV VGDHCQLGPVIMCKKAAR
Sbjct: 633 GGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGAKQVVFVGDHCQLGPVIMCKKAAR 692
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHP LSEFPSN+FYEGTLQNGVT+NERQSSGIDF
Sbjct: 693 AGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNNFYEGTLQNGVTVNERQSSGIDF 752
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 753 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 812
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 813 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 872
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 873 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 932
Query: 840 KIYNDRRLFFGAGPGIVPND----ISTSNPNADRRGSRARG-YMPPGPPNGTHKPGLHPA 894
KIYNDRRLFFG GPGIVPND +++++ NADRR SR+RG Y+ PGPPNGTHKPG+ A
Sbjct: 933 KIYNDRRLFFGGGPGIVPNDSFGSVASASSNADRRNSRSRGSYLSPGPPNGTHKPGV--A 990
Query: 895 GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGS 954
GFPMPRVP+PPF GPPSQPYAIP+RGAVHGP+GAV VPPPGSRGF AGRG+AGAPIGS
Sbjct: 991 GFPMPRVPIPPFHDGPPSQPYAIPTRGAVHGPIGAVPQVPPPGSRGFSAGRGNAGAPIGS 1050
Query: 955 HLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFS 1014
HL HQQ QQ IG IGS FNFP+LEN NSQPSVGGPL+QPG+
Sbjct: 1051 HLSHQQGNQQGIGNIGS-FNFPALENPNSQPSVGGPLSQPGY------------------ 1091
Query: 1015 VGSMSQDFLGDDFKSQGSHV 1034
+FLGDDFKSQGSHV
Sbjct: 1092 ------EFLGDDFKSQGSHV 1105
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/261 (71%), Positives = 205/261 (78%), Gaps = 23/261 (8%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTT 60
MD+Q NL+ETASQPDT TDAYTFLEFNTQGESDFD YPEFRSPV+WPTPSDSL T+
Sbjct: 1 MDNQDNNLYETASQPDTATDAYTFLEFNTQGESDFD-YPEFRSPVAWPTPSDSLGA--TS 57
Query: 61 PVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGA-NNSSNTSTSQIVEGM- 118
T SD R+A D HSDSLAA+ SK A +N+ T +VEG+
Sbjct: 58 SAVDPTSSDHRTAASTPD--------LHSDSLAASPVASKSAARGGGANSGTQGVVEGLV 109
Query: 119 ---AGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 175
GL+FEETGDD +G+E+GK DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT
Sbjct: 110 ASIGGLNFEETGDD-DGYEFGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 168
Query: 176 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE
Sbjct: 169 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 228
Query: 236 PCLNMMKESQSKDNVTIRWDI 256
PCLN+ + KD + WD+
Sbjct: 229 PCLNV---NALKD---MNWDL 243
>gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
gi|222637078|gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group]
Length = 1277
Score = 1445 bits (3741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/800 (87%), Positives = 744/800 (93%), Gaps = 7/800 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKD++T+RWDIGLNKKR+AYFVFPKEDNELRLVPGDELRLRYSGD++HPAWQSV
Sbjct: 362 MMKESQSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSV 421
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPVD+NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 422 GHVIKLTAQEEVALELRASQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 481
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q++RNTLPRRFGAPGLPELNASQV AVKSVLQ+PISLIQGPPGTGKT
Sbjct: 482 YIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPISLIQGPPGTGKT 541
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEHL
Sbjct: 542 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHL 601
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCTC
Sbjct: 602 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTC 661
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 662 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 721
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV+LG+KP RLQVQYRMHP LS+FPSN FYEGTLQNGVT+NERQ+ GIDF
Sbjct: 722 AGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDF 781
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 782 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 841
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 842 GQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 901
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 902 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 961
Query: 840 KIYNDRRLFFGAGPGIVPN---DISTSNPNADRRGSRARG--YMPPGPPNGTHKPGLHPA 894
KIYNDRRLF G G G++ + +NP AD+R R +G ++P GPPNG HKPG+HP+
Sbjct: 962 KIYNDRRLFLGGGQGVMQGASFGAAGTNPVADKRSGRGKGHSFVPFGPPNGAHKPGVHPS 1021
Query: 895 GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGS 954
G+P+PR+P PPF G SQPYAIP+RG++HGP+GAV VP PG+R FG RG+ G PIG
Sbjct: 1022 GYPLPRMPFPPFAGA-HSQPYAIPTRGSLHGPIGAVPPVPQPGNRNFGP-RGNTGGPIGG 1079
Query: 955 HLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFS 1014
HL HQQ++QQ +G +GS FNFP LEN +SQPS GGP++Q G + MPVQG SQTFRDGFS
Sbjct: 1080 HLAHQQSSQQAMGGMGSAFNFPGLENPSSQPSGGGPMSQTGLMTQMPVQGLSQTFRDGFS 1139
Query: 1015 VGSMSQDFLGDDFKSQGSHV 1034
+G MSQDF GDDFKSQGSHV
Sbjct: 1140 IGGMSQDFFGDDFKSQGSHV 1159
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 119/144 (82%), Gaps = 13/144 (9%)
Query: 118 MAGLSFEE---TGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
+A LSFEE G +G++YGK DF EHACRYCG+ NPACV RCNVPSCRKWFCNSRGN
Sbjct: 134 VAALSFEEPLGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGN 193
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK E+VVVLLCR
Sbjct: 194 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCR 253
Query: 235 EPCL--NMMKESQSKDNVTIRWDI 256
EPCL N +K+ + WD+
Sbjct: 254 EPCLSVNALKD--------MNWDL 269
>gi|218199657|gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
Length = 1277
Score = 1444 bits (3739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/800 (87%), Positives = 744/800 (93%), Gaps = 7/800 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKD++T+RWDIGLNKKR+AYFVFPKEDNELRLVPGDELRLRYSGD++HPAWQSV
Sbjct: 362 MMKESQSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSV 421
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPVD+NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 422 GHVIKLTAQEEVALELRASQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 481
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q++RNTLPRRFGAPGLPELNASQV AVKSVLQ+PISLIQGPPGTGKT
Sbjct: 482 YIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPISLIQGPPGTGKT 541
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEHL
Sbjct: 542 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHL 601
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCTC
Sbjct: 602 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTC 661
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 662 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 721
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV+LG+KP RLQVQYRMHP LS+FPSN FYEGTLQNGVT+NERQ+ GIDF
Sbjct: 722 AGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDF 781
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 782 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 841
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 842 GQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 901
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 902 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 961
Query: 840 KIYNDRRLFFGAGPGIVPN---DISTSNPNADRRGSRARG--YMPPGPPNGTHKPGLHPA 894
KIYNDRRLF G G G++ + +NP AD+R R +G ++P GPPNG HKPG+HP+
Sbjct: 962 KIYNDRRLFLGGGQGVMQGASFGAAGTNPVADKRSGRGKGHSFVPFGPPNGAHKPGVHPS 1021
Query: 895 GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGS 954
G+P+PR+P PPF G SQPYAIP+RG++HGP+GAV VP PG+R FG RG+ G PIG
Sbjct: 1022 GYPLPRMPFPPFAGA-HSQPYAIPTRGSLHGPIGAVPPVPQPGNRNFGP-RGNTGGPIGG 1079
Query: 955 HLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFS 1014
HL HQQ++QQ +G +GS FNFP LEN +SQPS GGP++Q G + MPVQG SQTFRDGFS
Sbjct: 1080 HLAHQQSSQQAMGGMGSAFNFPGLENPSSQPSGGGPMSQTGLMTQMPVQGLSQTFRDGFS 1139
Query: 1015 VGSMSQDFLGDDFKSQGSHV 1034
+G MSQDF GDDFKSQGSHV
Sbjct: 1140 IGGMSQDFFGDDFKSQGSHV 1159
Score = 239 bits (609), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 119/144 (82%), Gaps = 13/144 (9%)
Query: 118 MAGLSFEE---TGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
+A LSFEE G +G++YGK DF EHACRYCG+ NPACV RCNVPSCRKWFCNSRGN
Sbjct: 134 VAALSFEEPLGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGN 193
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK E+VVVLLCR
Sbjct: 194 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCR 253
Query: 235 EPCL--NMMKESQSKDNVTIRWDI 256
EPCL N +K+ + WD+
Sbjct: 254 EPCLSVNALKD--------MNWDL 269
>gi|115472199|ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group]
gi|113611234|dbj|BAF21612.1| Os07g0495900, partial [Oryza sativa Japonica Group]
Length = 1121
Score = 1444 bits (3737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/800 (87%), Positives = 744/800 (93%), Gaps = 7/800 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKD++T+RWDIGLNKKR+AYFVFPKEDNELRLVPGDELRLRYSGD++HPAWQSV
Sbjct: 206 MMKESQSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSV 265
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPVD+NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 266 GHVIKLTAQEEVALELRASQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 325
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q++RNTLPRRFGAPGLPELNASQV AVKSVLQ+PISLIQGPPGTGKT
Sbjct: 326 YIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPISLIQGPPGTGKT 385
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEHL
Sbjct: 386 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHL 445
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCTC
Sbjct: 446 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTC 505
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 506 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 565
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV+LG+KP RLQVQYRMHP LS+FPSN FYEGTLQNGVT+NERQ+ GIDF
Sbjct: 566 AGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDF 625
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 626 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 685
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 686 GQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 745
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 746 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 805
Query: 840 KIYNDRRLFFGAGPGIVPN---DISTSNPNADRRGSRARG--YMPPGPPNGTHKPGLHPA 894
KIYNDRRLF G G G++ + +NP AD+R R +G ++P GPPNG HKPG+HP+
Sbjct: 806 KIYNDRRLFLGGGQGVMQGASFGAAGTNPVADKRSGRGKGHSFVPFGPPNGAHKPGVHPS 865
Query: 895 GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGS 954
G+P+PR+P PPF G SQPYAIP+RG++HGP+GAV VP PG+R FG RG+ G PIG
Sbjct: 866 GYPLPRMPFPPF-AGAHSQPYAIPTRGSLHGPIGAVPPVPQPGNRNFGP-RGNTGGPIGG 923
Query: 955 HLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFS 1014
HL HQQ++QQ +G +GS FNFP LEN +SQPS GGP++Q G + MPVQG SQTFRDGFS
Sbjct: 924 HLAHQQSSQQAMGGMGSAFNFPGLENPSSQPSGGGPMSQTGLMTQMPVQGLSQTFRDGFS 983
Query: 1015 VGSMSQDFLGDDFKSQGSHV 1034
+G MSQDF GDDFKSQGSHV
Sbjct: 984 IGGMSQDFFGDDFKSQGSHV 1003
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 104/121 (85%), Gaps = 10/121 (8%)
Query: 138 ADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKD 197
DF EHACRYCG+ NPACV RCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKD
Sbjct: 1 GDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKD 60
Query: 198 SPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCL--NMMKESQSKDNVTIRWD 255
SPLGETILECYNCGCRNVFLLGFISAK E+VVVLLCREPCL N +K+ + WD
Sbjct: 61 SPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCREPCLSVNALKD--------MNWD 112
Query: 256 I 256
+
Sbjct: 113 L 113
>gi|449464902|ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 1432 bits (3706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/800 (88%), Positives = 733/800 (91%), Gaps = 28/800 (3%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDNVT+RWDIGLNKKR+AYFVFPKEDNELRLVPGDELRLRYSGDAAHPAW SV
Sbjct: 332 MMKESQSKDNVTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSV 391
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPVD+ HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 392 GHVIKLTAQEEVALELRASQGVPVDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 451
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQ+PISLIQGPPGTGKT
Sbjct: 452 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKT 511
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 512 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 571
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSE+SELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC
Sbjct: 572 TLHYQVRHLDTSERSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 631
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLGAKQ VLVGDHCQLGPVIMCKKAAR
Sbjct: 632 VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAAR 691
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS+GIDF
Sbjct: 692 AGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDF 751
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 752 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 811
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 812 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 871
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSM+QFQKPK
Sbjct: 872 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPK 931
Query: 840 KIYNDRRLFFGAGPGIVPND----ISTSNPNADRRGSRARG-YMPPGPPNGTHKPGLHPA 894
KIYNDRRLFF GPG+VPND ++ S PNADRR SR RG Y PP PNG KPG+H +
Sbjct: 932 KIYNDRRLFFAGGPGVVPNDNFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHAS 991
Query: 895 GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGS 954
G+PMPRVPLP F GGPP P PGSRGFGAGRG+AGAPIGS
Sbjct: 992 GYPMPRVPLPSFHGGPPPPPPVGAVPHVPQ-----------PGSRGFGAGRGNAGAPIGS 1040
Query: 955 HLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFS 1014
L S FNFP LE+ NSQPSVGGPL+Q GFVNNMPVQ P+QTFRDG+S
Sbjct: 1041 QLPX------------SAFNFPGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYS 1088
Query: 1015 VGSMSQDFLGDDFKSQGSHV 1034
+G +SQDFLGDDFKSQGSHV
Sbjct: 1089 MGGISQDFLGDDFKSQGSHV 1108
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/271 (63%), Positives = 195/271 (71%), Gaps = 47/271 (17%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFRSP----VSWPTPSDSLSV 56
MDSQQ NLFETASQPDT DAYTFLEFNTQGE DFD YPEFR P V+WPTPSDSL+
Sbjct: 1 MDSQQNNLFETASQPDTANDAYTFLEFNTQGE-DFD-YPEFRDPIRPPVAWPTPSDSLA- 57
Query: 57 DPTTPVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSK-----RGANNSSNTST 111
D SDH SD+ +++P G + +
Sbjct: 58 ------------DHTDRGGGSDHQ--------SDASPVSAAPGSATKGRTGGGSGNTGGN 97
Query: 112 SQIVE----GMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKW 167
+Q+V+ GM+GL+F++TGDD + +E+GK +FTEHACRYCGVSNPACVVRCNVPSCRKW
Sbjct: 98 NQMVDALAAGMSGLTFKDTGDD-DNYEFGKGNFTEHACRYCGVSNPACVVRCNVPSCRKW 156
Query: 168 FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTES 227
FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTES
Sbjct: 157 FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTES 216
Query: 228 VVVLLCREPCL--NMMKESQSKDNVTIRWDI 256
VVVLLCREPCL N +K+ + WD+
Sbjct: 217 VVVLLCREPCLSVNALKD--------MNWDL 239
>gi|242045720|ref|XP_002460731.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
gi|241924108|gb|EER97252.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
Length = 1269
Score = 1425 bits (3690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/797 (86%), Positives = 733/797 (91%), Gaps = 4/797 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDNVT+RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY GD++HP WQSV
Sbjct: 356 MMKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSHPTWQSV 415
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVP ++N GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 416 GHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 475
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q++RNTLPRRFGAPGLPELNASQV AVKSVLQ+P+SLIQGPPGTGKT
Sbjct: 476 YIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKT 535
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEHL
Sbjct: 536 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHL 595
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCTC
Sbjct: 596 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTC 655
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 656 VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 715
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV+LG+KP RLQVQYRMHP LSEFPSN FYEGTLQNGVT+NERQSSGIDF
Sbjct: 716 AGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDF 775
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 776 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 835
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 836 GQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 895
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 896 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 955
Query: 840 KIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARG--YMPPGPPNGTHKPGLHPAGFP 897
KIYNDRRLF G G G++ + S+ AD+R R +G ++P GPPNG HKPG+HPAG+
Sbjct: 956 KIYNDRRLFLGGGQGVM-HGAGASSQAADKRSGRGKGQSFVPYGPPNGVHKPGVHPAGYA 1014
Query: 898 MPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSHLQ 957
+PR+P PPF G P SQPY IP+RG +HGP+GAV V PGSR FGA R + G PIG HL
Sbjct: 1015 VPRMPFPPFPGAPHSQPYTIPTRG-LHGPIGAVPPVHQPGSRNFGAPRSNTGGPIGGHLA 1073
Query: 958 HQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVGS 1017
HQQN+QQ +G IGS FN+ +EN +SQPS G ++Q G + MPVQG SQTFRDGFS+G
Sbjct: 1074 HQQNSQQAMGGIGSNFNYTGMENPSSQPSGGAQMSQTGLMTQMPVQGLSQTFRDGFSIGG 1133
Query: 1018 MSQDFLGDDFKSQGSHV 1034
MSQDF DDFKSQGSHV
Sbjct: 1134 MSQDFFVDDFKSQGSHV 1150
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 175/269 (65%), Gaps = 36/269 (13%)
Query: 6 TNLFETASQPDT--GTDAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTTPVT 63
+L+ETASQPD DAYTFLEFNTQG+ DFD YP+F +S P P +TP+T
Sbjct: 13 VDLYETASQPDAPAAGDAYTFLEFNTQGD-DFD-YPDFPE-LSQPPPR-------STPLT 62
Query: 64 PATPSDSRSAPPASDHHHHHNHHRHSD-SLAATSSPS----------KRGANNSSNTSTS 112
+ P S+ + + L P+ + + S+ +
Sbjct: 63 SSVPGAGASSSSWPAPPPPPSDAASPEPDLTPQDVPTPLASSSSPSPRSASKARSSAAAD 122
Query: 113 QIVEGMAGLSFEE---TGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFC 169
+ G+A LSFEE G +G++YGK DF EHACRYCG+ NPACV RCNVPSCRKWFC
Sbjct: 123 GLASGVAALSFEEPVGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFC 182
Query: 170 NSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVV 229
NSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK+E+VV
Sbjct: 183 NSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKSENVV 242
Query: 230 VLLCREPCL--NMMKESQSKDNVTIRWDI 256
VLLCREPCL N +K+ + WD+
Sbjct: 243 VLLCREPCLSVNALKD--------MNWDL 263
>gi|357122747|ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Brachypodium
distachyon]
Length = 1267
Score = 1423 bits (3684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/798 (86%), Positives = 737/798 (92%), Gaps = 5/798 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKD+VT+RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSG +HPAWQSV
Sbjct: 353 MMKESQSKDSVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGGTSHPAWQSV 412
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVPV+++HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 413 GHVIKLTAQEEVALELRASQGVPVELSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 472
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q++RNTLP+RFGAPGLPELNASQV AVKSVLQ+P+SLIQGPPGTGKT
Sbjct: 473 YIYHHLLGHEVEHQIIRNTLPKRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKT 532
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEHL
Sbjct: 533 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHL 592
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSE+HKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCTC
Sbjct: 593 TLHYQVRHLDTSEKSEMHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTC 652
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 653 VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 712
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV+LG+KP RLQVQYRMHP LSEFPSN FYEGTLQNGVT+NERQS+GIDF
Sbjct: 713 AGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSTGIDF 772
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMG EEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 773 PWPVPNRPMFFYVQMGVEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 832
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 833 GQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 892
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIV+LGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 893 RLNVALTRARYGIVVLGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 952
Query: 840 KIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARG--YMPPGPPNGTHKPGLHPAGFP 897
KIYNDRRLF G G G++ + + D+R R + ++P GPPNG HKPG+HP+ +P
Sbjct: 953 KIYNDRRLFLGGGQGVMHGSSFGTAGSVDKRSGRGKAHPFVPFGPPNGAHKPGVHPS-YP 1011
Query: 898 MPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSHL- 956
+PR+P PPF G P SQPYAIP+RG++HGP+GAV VP PG+R FGA R + G PIG HL
Sbjct: 1012 LPRMPFPPFPGSPHSQPYAIPTRGSLHGPIGAVPAVPQPGNRNFGAPRANTG-PIGGHLA 1070
Query: 957 QHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG 1016
HQQN+QQ +G +G +NF LEN +SQPS GGP++QPG + MPVQG SQTFRDGF++G
Sbjct: 1071 AHQQNSQQAMGNVGPAYNFTGLENPSSQPSGGGPMSQPGLMTQMPVQGLSQTFRDGFAIG 1130
Query: 1017 SMSQDFLGDDFKSQGSHV 1034
MSQDF GDDFKSQGSHV
Sbjct: 1131 GMSQDFFGDDFKSQGSHV 1148
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/146 (74%), Positives = 122/146 (83%), Gaps = 9/146 (6%)
Query: 114 IVEGMAGLSFEE---TGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCN 170
+ G+A LSFEE G +G++YGK DF EHACRYCG+ +PACV RCNVPSCRKWFCN
Sbjct: 121 LAAGVAALSFEEPPGAGAGEDGYDYGKGDFVEHACRYCGIHSPACVARCNVPSCRKWFCN 180
Query: 171 SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVV 230
SRGNTSGSH+VNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK E+VVV
Sbjct: 181 SRGNTSGSHLVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVV 240
Query: 231 LLCREPCLNMMKESQSKDNVTIRWDI 256
LLCREPCLN+ + KD + WD+
Sbjct: 241 LLCREPCLNV---NALKD---MNWDL 260
>gi|414886783|tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1272
Score = 1412 bits (3655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/799 (85%), Positives = 727/799 (90%), Gaps = 5/799 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
M KESQSKDNVT+RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY GD++HP WQSV
Sbjct: 356 MTKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSHPTWQSV 415
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVP ++N GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 416 GHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 475
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q++RNTLPRRFGAPGLPELNASQV AVKSVLQ+P+SLIQGPPGTGKT
Sbjct: 476 YIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKT 535
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTS AIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEHL
Sbjct: 536 VTSGAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHL 595
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSE HKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCTC
Sbjct: 596 TLHYQVRHLDTSEKSEFHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTC 655
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 656 VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 715
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV+LG+KP RLQVQYRMHP LSEFPSN FYEGTLQNGVT+NER SSGIDF
Sbjct: 716 AGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDF 775
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 776 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 835
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 836 GQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 895
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 896 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 955
Query: 840 KIYNDRRLFFGAGPGIVPNDI--STSNPNADRRGSRARG--YMPPGPPNGTHKPGLHPAG 895
KIYNDRRL G G+ + S+ AD+R R +G ++ GPPNG HKPG+HPAG
Sbjct: 956 KIYNDRRLLLGGAQGMHGANFGAGASSQAADKRSGRGKGQSFVSYGPPNGVHKPGVHPAG 1015
Query: 896 FPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSH 955
+ +PR+P PPF G P SQPYAIP+RG +HGP+GAV V PGSR FGA R + G PIG H
Sbjct: 1016 YAVPRMPFPPFPGAPHSQPYAIPTRG-LHGPIGAVPPVHQPGSRSFGAPRSNTGGPIGGH 1074
Query: 956 LQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSV 1015
L HQQN+QQ +G IGS FN+ +ENS+SQPS ++Q G + MPVQG SQTFRDGFS+
Sbjct: 1075 LAHQQNSQQAMGGIGSNFNYAGMENSSSQPSGVAQMSQSGLMTQMPVQGLSQTFRDGFSI 1134
Query: 1016 GSMSQDFLGDDFKSQGSHV 1034
G MSQDF+ DDFKSQGSHV
Sbjct: 1135 GGMSQDFIVDDFKSQGSHV 1153
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/268 (53%), Positives = 175/268 (65%), Gaps = 36/268 (13%)
Query: 7 NLFETASQPDTGT--DAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTTPVTP 64
+++ETASQPD DAYTFLEFNTQG+ +FD YP+F +S P P +TP+T
Sbjct: 14 DMYETASQPDASVAGDAYTFLEFNTQGD-EFD-YPDFPE-LSQPPPR-------STPLTS 63
Query: 65 ATPSDSRSAPPASDHHHHHNHHRHSD-----------SLAATSSPSKRGANNSSNTSTSQ 113
+ P S+ + ++ +++S + + S +
Sbjct: 64 SIPGAGASSSSWPAPPPPPSDAASAEPDLTSLDVPTPPASSSSPSPRSASKARSLAAADG 123
Query: 114 IVEGMAGLSFEE---TGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCN 170
+ G+A LSFE+ G +G++YGK DF EHACRYCG+ NPACV RCNVPSCRKWFCN
Sbjct: 124 LASGVAALSFEDPVGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCN 183
Query: 171 SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVV 230
SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK E+VVV
Sbjct: 184 SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKLENVVV 243
Query: 231 LLCREPCL--NMMKESQSKDNVTIRWDI 256
LLCREPCL N +K+ + WD+
Sbjct: 244 LLCREPCLSVNALKD--------MNWDL 263
>gi|414886784|tpg|DAA62798.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1205
Score = 1412 bits (3655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/799 (85%), Positives = 727/799 (90%), Gaps = 5/799 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
M KESQSKDNVT+RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY GD++HP WQSV
Sbjct: 356 MTKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSHPTWQSV 415
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVP ++N GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 416 GHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 475
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q++RNTLPRRFGAPGLPELNASQV AVKSVLQ+P+SLIQGPPGTGKT
Sbjct: 476 YIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKT 535
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTS AIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEHL
Sbjct: 536 VTSGAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHL 595
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSE HKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCTC
Sbjct: 596 TLHYQVRHLDTSEKSEFHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTC 655
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 656 VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 715
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV+LG+KP RLQVQYRMHP LSEFPSN FYEGTLQNGVT+NER SSGIDF
Sbjct: 716 AGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDF 775
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 776 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 835
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 836 GQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 895
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 896 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 955
Query: 840 KIYNDRRLFFGAGPGIVPNDI--STSNPNADRRGSRARG--YMPPGPPNGTHKPGLHPAG 895
KIYNDRRL G G+ + S+ AD+R R +G ++ GPPNG HKPG+HPAG
Sbjct: 956 KIYNDRRLLLGGAQGMHGANFGAGASSQAADKRSGRGKGQSFVSYGPPNGVHKPGVHPAG 1015
Query: 896 FPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSH 955
+ +PR+P PPF G P SQPYAIP+RG +HGP+GAV V PGSR FGA R + G PIG H
Sbjct: 1016 YAVPRMPFPPFPGAPHSQPYAIPTRG-LHGPIGAVPPVHQPGSRSFGAPRSNTGGPIGGH 1074
Query: 956 LQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSV 1015
L HQQN+QQ +G IGS FN+ +ENS+SQPS ++Q G + MPVQG SQTFRDGFS+
Sbjct: 1075 LAHQQNSQQAMGGIGSNFNYAGMENSSSQPSGVAQMSQSGLMTQMPVQGLSQTFRDGFSI 1134
Query: 1016 GSMSQDFLGDDFKSQGSHV 1034
G MSQDF+ DDFKSQGSHV
Sbjct: 1135 GGMSQDFIVDDFKSQGSHV 1153
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/268 (53%), Positives = 175/268 (65%), Gaps = 36/268 (13%)
Query: 7 NLFETASQPDTGT--DAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTTPVTP 64
+++ETASQPD DAYTFLEFNTQG+ +FD YP+F +S P P +TP+T
Sbjct: 14 DMYETASQPDASVAGDAYTFLEFNTQGD-EFD-YPDFPE-LSQPPPR-------STPLTS 63
Query: 65 ATPSDSRSAPPASDHHHHHNHHRHSD-----------SLAATSSPSKRGANNSSNTSTSQ 113
+ P S+ + ++ +++S + + S +
Sbjct: 64 SIPGAGASSSSWPAPPPPPSDAASAEPDLTSLDVPTPPASSSSPSPRSASKARSLAAADG 123
Query: 114 IVEGMAGLSFEE---TGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCN 170
+ G+A LSFE+ G +G++YGK DF EHACRYCG+ NPACV RCNVPSCRKWFCN
Sbjct: 124 LASGVAALSFEDPVGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCN 183
Query: 171 SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVV 230
SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK E+VVV
Sbjct: 184 SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKLENVVV 243
Query: 231 LLCREPCL--NMMKESQSKDNVTIRWDI 256
LLCREPCL N +K+ + WD+
Sbjct: 244 LLCREPCLSVNALKD--------MNWDL 263
>gi|414886782|tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1273
Score = 1410 bits (3649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 686/800 (85%), Positives = 726/800 (90%), Gaps = 6/800 (0%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
M KESQSKDNVT+RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY GD++HP WQSV
Sbjct: 356 MTKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSHPTWQSV 415
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVP ++N GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 416 GHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 475
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q++RNTLPRRFGAPGLPELNASQV AVKSVLQ+P+SLIQGPPGTGKT
Sbjct: 476 YIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKT 535
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTS AIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEHL
Sbjct: 536 VTSGAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHL 595
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSE HKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCTC
Sbjct: 596 TLHYQVRHLDTSEKSEFHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTC 655
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 656 VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 715
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV+LG+KP RLQVQYRMHP LSEFPSN FYEGTLQNGVT+NER SSGIDF
Sbjct: 716 AGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDF 775
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 776 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 835
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 836 GQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 895
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 896 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 955
Query: 840 KIYNDRRLFFGAGPGIVPNDI--STSNPNADRRGSRARG---YMPPGPPNGTHKPGLHPA 894
KIYNDRRL G G+ + S+ AD+R R + ++ GPPNG HKPG+HPA
Sbjct: 956 KIYNDRRLLLGGAQGMHGANFGAGASSQAADKRSGRGKAGQSFVSYGPPNGVHKPGVHPA 1015
Query: 895 GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGS 954
G+ +PR+P PPF G P SQPYAIP+RG +HGP+GAV V PGSR FGA R + G PIG
Sbjct: 1016 GYAVPRMPFPPFPGAPHSQPYAIPTRG-LHGPIGAVPPVHQPGSRSFGAPRSNTGGPIGG 1074
Query: 955 HLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFS 1014
HL HQQN+QQ +G IGS FN+ +ENS+SQPS ++Q G + MPVQG SQTFRDGFS
Sbjct: 1075 HLAHQQNSQQAMGGIGSNFNYAGMENSSSQPSGVAQMSQSGLMTQMPVQGLSQTFRDGFS 1134
Query: 1015 VGSMSQDFLGDDFKSQGSHV 1034
+G MSQDF+ DDFKSQGSHV
Sbjct: 1135 IGGMSQDFIVDDFKSQGSHV 1154
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/268 (53%), Positives = 175/268 (65%), Gaps = 36/268 (13%)
Query: 7 NLFETASQPDTGT--DAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTTPVTP 64
+++ETASQPD DAYTFLEFNTQG+ +FD YP+F +S P P +TP+T
Sbjct: 14 DMYETASQPDASVAGDAYTFLEFNTQGD-EFD-YPDFPE-LSQPPPR-------STPLTS 63
Query: 65 ATPSDSRSAPPASDHHHHHNHHRHSD-----------SLAATSSPSKRGANNSSNTSTSQ 113
+ P S+ + ++ +++S + + S +
Sbjct: 64 SIPGAGASSSSWPAPPPPPSDAASAEPDLTSLDVPTPPASSSSPSPRSASKARSLAAADG 123
Query: 114 IVEGMAGLSFEE---TGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCN 170
+ G+A LSFE+ G +G++YGK DF EHACRYCG+ NPACV RCNVPSCRKWFCN
Sbjct: 124 LASGVAALSFEDPVGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCN 183
Query: 171 SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVV 230
SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK E+VVV
Sbjct: 184 SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKLENVVV 243
Query: 231 LLCREPCL--NMMKESQSKDNVTIRWDI 256
LLCREPCL N +K+ + WD+
Sbjct: 244 LLCREPCLSVNALKD--------MNWDL 263
>gi|297794533|ref|XP_002865151.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297310986|gb|EFH41410.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 1398 bits (3619), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/799 (87%), Positives = 735/799 (91%), Gaps = 21/799 (2%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSK+N+T+RWDIGLNKKRVAYFVFPKE+NELRLVPGDELRLRYSGD AHPAWQSV
Sbjct: 338 MMKESQSKENLTVRWDIGLNKKRVAYFVFPKEENELRLVPGDELRLRYSGDTAHPAWQSV 397
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRA+QGVPVD+NHGFSVDFVWKSTSFDRMQGAMK FAVDETSVSG
Sbjct: 398 GHVIKLTAQEEVALELRANQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSG 457
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYH LLGHEVE QMVRNTLPRRFG PGLPELNASQV AVKSVLQ+PISLIQGPPGTGKT
Sbjct: 458 YIYHQLLGHEVEAQMVRNTLPRRFGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKT 517
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 518 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 577
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK LKR TEREI+QSADVICCTC
Sbjct: 578 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKNLKRQTEREITQSADVICCTC 637
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGA D RL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 638 VGAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 697
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHP+LSEFPSNSFYEGTLQNGVTI ERQ++GIDF
Sbjct: 698 AGLAQSLFERLVLLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDF 757
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQ+GQEEISASGTSYLNRTEAANVEK+VT FL+SGVVPSQIGVITPYE
Sbjct: 758 PWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYE 817
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYM+RNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 818 GQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 877
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP+
Sbjct: 878 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPR 937
Query: 840 KIYNDRRLFFGAGPGIVPND-ISTSNPNADRRGSRARG---YMPPGPPNGTHKPGLHPAG 895
KIYNDRRLF G G++ ND + NPNADRRGSR R Y+P GPPNG +PGLHPAG
Sbjct: 938 KIYNDRRLFSCGGAGMIGNDNYGSGNPNADRRGSRGRAGGPYLPSGPPNGA-RPGLHPAG 996
Query: 896 FPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSH 955
+P+PRVPL PF GGPPSQPYAIP+R GPVGAV H P PG+ GFGAGRG++ +G H
Sbjct: 997 YPIPRVPLSPFPGGPPSQPYAIPTR----GPVGAVPHAPQPGNHGFGAGRGTS---VGGH 1049
Query: 956 LQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSV 1015
L HQQ TQ +GTIG + NFP L++ NSQPS GGPL+QPG+ SQ FRDGFS+
Sbjct: 1050 LPHQQATQHNVGTIGPSLNFP-LDSPNSQPSPGGPLSQPGY--------GSQAFRDGFSM 1100
Query: 1016 GSMSQDFLGDDFKSQGSHV 1034
G +SQDFLGDDFKSQGSHV
Sbjct: 1101 GGISQDFLGDDFKSQGSHV 1119
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/261 (64%), Positives = 193/261 (73%), Gaps = 21/261 (8%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTT 60
MDSQQ++LF+TASQPD DAYTFLEFNTQG+S+FD YPEFRSP +WPTPSDS+S+
Sbjct: 1 MDSQQSDLFDTASQPDAVADAYTFLEFNTQGDSEFD-YPEFRSPTAWPTPSDSISI---- 55
Query: 61 PVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNT-----STSQIV 115
A SD A+DHH + + A + RG S +
Sbjct: 56 ----ADVSDRGGGGAAADHHSEASSPSSLSAGAGNGAKVGRGGVGGSGGVSSSSQVDALA 111
Query: 116 EGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 175
GM L+FEETGDD +GF+YGK DFTEHAC+YCG+SNPACVVRCNV SCRKWFCNSRGNT
Sbjct: 112 AGMGNLNFEETGDD-DGFDYGKNDFTEHACKYCGISNPACVVRCNVASCRKWFCNSRGNT 170
Query: 176 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
SGSHIVNHLVRAKHKEVCLH+DSPLGETILECYNCGCRNVFLLGFISAKT+SVVVLLCR+
Sbjct: 171 SGSHIVNHLVRAKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFISAKTDSVVVLLCRD 230
Query: 236 PCLNMMKESQSKDNVTIRWDI 256
PCLN+ + KD + WD+
Sbjct: 231 PCLNV---NALKD---MNWDL 245
>gi|30695086|ref|NP_199512.2| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
gi|88984684|sp|Q9FJR0.2|RENT1_ARATH RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName:
Full=ATP-dependent helicase UPF1
gi|332008074|gb|AED95457.1| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
Length = 1254
Score = 1395 bits (3610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/798 (86%), Positives = 730/798 (91%), Gaps = 21/798 (2%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSK+N+T+RWDIGLNKKRVAYFVFPKE+NELRLVPGDELRLRYSGDA HP+WQSV
Sbjct: 338 MMKESQSKENLTVRWDIGLNKKRVAYFVFPKEENELRLVPGDELRLRYSGDAVHPSWQSV 397
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRA+QGVP+D+NHGFSVDFVWKSTSFDRMQGAMK FAVDETSVSG
Sbjct: 398 GHVIKLTAQEEVALELRANQGVPIDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSG 457
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYH LLGHEVE QMVRNTLPRRFG PGLPELNASQV AVKSVLQ+PISLIQGPPGTGKT
Sbjct: 458 YIYHQLLGHEVEAQMVRNTLPRRFGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKT 517
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE+L
Sbjct: 518 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYL 577
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK LKRATEREI+QSADVICCTC
Sbjct: 578 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTC 637
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGA D RL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 638 VGAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 697
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV LG+KPIRLQVQYRMHP+LSEFPSNSFYEGTLQNGVTI ERQ++GIDF
Sbjct: 698 AGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDF 757
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQ+GQEEISASGTSYLNRTEAANVEK+VT FL+SGVVPSQIGVITPYE
Sbjct: 758 PWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYE 817
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYM+RNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 818 GQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 877
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP+
Sbjct: 878 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPR 937
Query: 840 KIYNDRRLFFGAGPGIVPND-ISTSNPNAD---RRGSRARGYMPPGPPNGTHKPGLHPAG 895
KIYNDRRLF+G G G++ ND + NPNAD RG Y+P GPPNG +PGLHPAG
Sbjct: 938 KIYNDRRLFYGGGAGMIGNDNFGSGNPNADRRGSRGRAGGSYLPSGPPNGA-RPGLHPAG 996
Query: 896 FPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSH 955
+P+PRVPL PF GGPPSQPYAIP+R GPVGAV H P PG+ GFGAGRG++ +G H
Sbjct: 997 YPIPRVPLSPFPGGPPSQPYAIPTR----GPVGAVPHAPQPGNHGFGAGRGTS---VGGH 1049
Query: 956 LQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSV 1015
L HQQ TQ +GTIG + NFP L++ NSQPS GGPL+QPG+ SQ FRDGFS+
Sbjct: 1050 LPHQQATQHNVGTIGPSLNFP-LDSPNSQPSPGGPLSQPGY--------GSQAFRDGFSM 1100
Query: 1016 GSMSQDFLGDDFKSQGSH 1033
G +SQDFL DD KSQGSH
Sbjct: 1101 GGISQDFLADDIKSQGSH 1118
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 163/261 (62%), Positives = 191/261 (73%), Gaps = 21/261 (8%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTT 60
MDSQQ++LF+TASQPDT D YTFLEFNTQG+S+FD Y +F SP +WPTPSDS+S+
Sbjct: 1 MDSQQSDLFDTASQPDTVADEYTFLEFNTQGDSEFD-YQDFGSPTAWPTPSDSISI---- 55
Query: 61 PVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNT-----STSQIV 115
A +D A+DHH + + A + RG S +
Sbjct: 56 ----ADVADRGEGGAAADHHSEASSPSSLSAGAGNGAKVGRGGVGGSGGVSSSSQVDALA 111
Query: 116 EGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 175
G+ L+FEETGDD +GF+YGK DFTEHAC+YCG+SNPACVVRCNV SCRKWFCNSRGNT
Sbjct: 112 AGVGNLNFEETGDD-DGFDYGKNDFTEHACKYCGISNPACVVRCNVASCRKWFCNSRGNT 170
Query: 176 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
SGSHIVNHLVRAKHKEVCLH+DSPLGETILECYNCGCRNVFLLGFISAKT+SVVVLLCR+
Sbjct: 171 SGSHIVNHLVRAKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFISAKTDSVVVLLCRD 230
Query: 236 PCLNMMKESQSKDNVTIRWDI 256
PCLN+ + KD + WD+
Sbjct: 231 PCLNV---NALKD---MNWDL 245
>gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana]
Length = 1243
Score = 1393 bits (3606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/798 (86%), Positives = 730/798 (91%), Gaps = 21/798 (2%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSK+N+T+RWDIGLNKKRVAYFVFPKE+NELRLVPGDELRLRYSGDA HP+WQSV
Sbjct: 327 MMKESQSKENLTVRWDIGLNKKRVAYFVFPKEENELRLVPGDELRLRYSGDAVHPSWQSV 386
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRA+QGVP+D+NHGFSVDFVWKSTSFDRMQGAMK FAVDETSVSG
Sbjct: 387 GHVIKLTAQEEVALELRANQGVPIDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSG 446
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYH LLGHEVE QMVRNTLPRRFG PGLPELNASQV AVKSVLQ+PISLIQGPPGTGKT
Sbjct: 447 YIYHQLLGHEVEAQMVRNTLPRRFGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKT 506
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE+L
Sbjct: 507 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYL 566
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK LKRATEREI+QSADVICCTC
Sbjct: 567 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTC 626
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGA D RL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 627 VGAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 686
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV LG+KPIRLQVQYRMHP+LSEFPSNSFYEGTLQNGVTI ERQ++GIDF
Sbjct: 687 AGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDF 746
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQ+GQEEISASGTSYLNRTEAANVEK+VT FL+SGVVPSQIGVITPYE
Sbjct: 747 PWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYE 806
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYM+RNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 807 GQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 866
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP+
Sbjct: 867 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPR 926
Query: 840 KIYNDRRLFFGAGPGIVPND-ISTSNPNAD---RRGSRARGYMPPGPPNGTHKPGLHPAG 895
KIYNDRRLF+G G G++ ND + NPNAD RG Y+P GPPNG +PGLHPAG
Sbjct: 927 KIYNDRRLFYGGGAGMIGNDNFGSGNPNADRRGSRGRAGGSYLPSGPPNGA-RPGLHPAG 985
Query: 896 FPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSH 955
+P+PRVPL PF GGPPSQPYAIP+R GPVGAV H P PG+ GFGAGRG++ +G H
Sbjct: 986 YPIPRVPLSPFPGGPPSQPYAIPTR----GPVGAVPHAPQPGNHGFGAGRGTS---VGGH 1038
Query: 956 LQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSV 1015
L HQQ TQ +GTIG + NFP L++ NSQPS GGPL+QPG+ SQ FRDGFS+
Sbjct: 1039 LPHQQATQHNVGTIGPSLNFP-LDSPNSQPSPGGPLSQPGY--------GSQAFRDGFSM 1089
Query: 1016 GSMSQDFLGDDFKSQGSH 1033
G +SQDFL DD KSQGSH
Sbjct: 1090 GGISQDFLADDIKSQGSH 1107
Score = 305 bits (781), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/250 (62%), Positives = 180/250 (72%), Gaps = 21/250 (8%)
Query: 12 ASQPDTGTDAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTTPVTPATPSDSR 71
ASQPDT D YTFLEFNTQG+S+FD Y +F SP +WPTPSDS+S+ A +D
Sbjct: 1 ASQPDTVADEYTFLEFNTQGDSEFD-YQDFGSPTAWPTPSDSISI--------ADVADRG 51
Query: 72 SAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNT-----STSQIVEGMAGLSFEET 126
A+DHH + + A + RG S + G+ L+FEET
Sbjct: 52 EGGAAADHHSEASSPSSLSAGAGNGAKVGRGGVGGSGGVSSSSQVDALAAGVGNLNFEET 111
Query: 127 GDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVR 186
GDD +GF+YGK DFTEHAC+YCG+SNPACVVRCNV SCRKWFCNSRGNTSGSHIVNHLVR
Sbjct: 112 GDD-DGFDYGKNDFTEHACKYCGISNPACVVRCNVASCRKWFCNSRGNTSGSHIVNHLVR 170
Query: 187 AKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQS 246
AKHKEVCLH+DSPLGETILECYNCGCRNVFLLGFISAKT+SVVVLLCR+PCLN+ +
Sbjct: 171 AKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFISAKTDSVVVLLCRDPCLNV---NAL 227
Query: 247 KDNVTIRWDI 256
KD + WD+
Sbjct: 228 KD---MNWDL 234
>gi|414886785|tpg|DAA62799.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1251
Score = 1368 bits (3541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 671/799 (83%), Positives = 710/799 (88%), Gaps = 26/799 (3%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
M KESQSKDNVT+RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY GD++HP WQSV
Sbjct: 356 MTKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSHPTWQSV 415
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRASQGVP ++N GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
Sbjct: 416 GHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 475
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYHHLLGHEVE Q++RNTLPRRFGAPGLPELNASQV AVKSVLQ+P+SLIQGPPGTGKT
Sbjct: 476 YIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKT 535
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTS AIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEHL
Sbjct: 536 VTSGAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHL 595
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSE HKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCTC
Sbjct: 596 TLHYQVRHLDTSEKSEFHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTC 655
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 656 VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 715
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV+LG+KP RLQVQYRMHP LSEFPSN FYEGTLQNGVT+NER SSGIDF
Sbjct: 716 AGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDF 775
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
Sbjct: 776 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 835
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 836 GQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 895
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPK
Sbjct: 896 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 955
Query: 840 KIYNDRRLFFGAGPGIVPNDI--STSNPNADRRGSRARG--YMPPGPPNGTHKPGLHPAG 895
KIYNDRRL G G+ + S+ AD+R R +G ++ GPPNG HKPG+HPAG
Sbjct: 956 KIYNDRRLLLGGAQGMHGANFGAGASSQAADKRSGRGKGQSFVSYGPPNGVHKPGVHPAG 1015
Query: 896 FPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSH 955
+ +PR+P PPF G P SQPYAIP+RG +HGP+GAV V PGSR FGA R + G PIG H
Sbjct: 1016 YAVPRMPFPPFPGAPHSQPYAIPTRG-LHGPIGAVPPVHQPGSRSFGAPRSNTGGPIGGH 1074
Query: 956 LQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSV 1015
L HQQN+QQ +G IGS FN+ +ENS+SQPS ++Q G
Sbjct: 1075 LAHQQNSQQAMGGIGSNFNYAGMENSSSQPSGVAQMSQSGL------------------- 1115
Query: 1016 GSMSQDFLGDDFKSQGSHV 1034
M+QDF+ DDFKSQGSHV
Sbjct: 1116 --MTQDFIVDDFKSQGSHV 1132
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/268 (53%), Positives = 175/268 (65%), Gaps = 36/268 (13%)
Query: 7 NLFETASQPDTGT--DAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTTPVTP 64
+++ETASQPD DAYTFLEFNTQG+ +FD YP+F +S P P +TP+T
Sbjct: 14 DMYETASQPDASVAGDAYTFLEFNTQGD-EFD-YPDFPE-LSQPPPR-------STPLTS 63
Query: 65 ATPSDSRSAPPASDHHHHHNHHRHSD-----------SLAATSSPSKRGANNSSNTSTSQ 113
+ P S+ + ++ +++S + + S +
Sbjct: 64 SIPGAGASSSSWPAPPPPPSDAASAEPDLTSLDVPTPPASSSSPSPRSASKARSLAAADG 123
Query: 114 IVEGMAGLSFEE---TGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCN 170
+ G+A LSFE+ G +G++YGK DF EHACRYCG+ NPACV RCNVPSCRKWFCN
Sbjct: 124 LASGVAALSFEDPVGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCN 183
Query: 171 SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVV 230
SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK E+VVV
Sbjct: 184 SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKLENVVV 243
Query: 231 LLCREPCL--NMMKESQSKDNVTIRWDI 256
LLCREPCL N +K+ + WD+
Sbjct: 244 LLCREPCLSVNALKD--------MNWDL 263
>gi|9759443|dbj|BAB10240.1| prematurely terminated mRNA decay factor-like protein [Arabidopsis
thaliana]
Length = 1235
Score = 1352 bits (3499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/798 (84%), Positives = 714/798 (89%), Gaps = 40/798 (5%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSK+N+T+RWDIGLNKKRVAYFVFPKE NELRLVPGDELRLRYSGDA HP+WQSV
Sbjct: 338 MMKESQSKENLTVRWDIGLNKKRVAYFVFPKE-NELRLVPGDELRLRYSGDAVHPSWQSV 396
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHV LTAQEEVALELRA+QGVP+D+NHGFSVDFVWKSTSFDRMQGAMK FAVDETSVSG
Sbjct: 397 GHV--LTAQEEVALELRANQGVPIDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSG 454
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYH LLGHEVE QMVRNTLPRRFG PGLPELNASQV AVKSVLQ+PISLIQGPPGTGKT
Sbjct: 455 YIYHQLLGHEVEAQMVRNTLPRRFGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKT 514
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE+L
Sbjct: 515 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYL 574
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK LKRATEREI+QSADVICCTC
Sbjct: 575 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTC 634
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGA D RL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAAR
Sbjct: 635 VGAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR 694
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLV LG+KPIRLQVQYRMHP+LSEFPSNSFYEGTLQNGVTI ERQ++GIDF
Sbjct: 695 AGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDF 754
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQ+GQEEISASGTSYLNRTEAANVEK+VT FL+SGVVPSQIGVITPYE
Sbjct: 755 PWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYE 814
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVNYM+RNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
Sbjct: 815 GQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 874
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP+
Sbjct: 875 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPR 934
Query: 840 KIYNDRRLFFGAGPGIVPND-ISTSNPNAD---RRGSRARGYMPPGPPNGTHKPGLHPAG 895
KIYNDRRLF+G G G++ ND + NPNAD RG Y+P GPPNG +PGLHPAG
Sbjct: 935 KIYNDRRLFYGGGAGMIGNDNFGSGNPNADRRGSRGRAGGSYLPSGPPNGA-RPGLHPAG 993
Query: 896 FPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSH 955
+P+PRVPL PF GGPPSQPYAIP+R GPVGAV H P PG+ GFGAGRG++ +G H
Sbjct: 994 YPIPRVPLSPFPGGPPSQPYAIPTR----GPVGAVPHAPQPGNHGFGAGRGTS---VGGH 1046
Query: 956 LQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSV 1015
L HQQ TQ +GTIG + NFP L++ NSQPS GGPL+QPG+
Sbjct: 1047 LPHQQATQHNVGTIGPSLNFP-LDSPNSQPSPGGPLSQPGY------------------- 1086
Query: 1016 GSMSQDFLGDDFKSQGSH 1033
DFL DD KSQGSH
Sbjct: 1087 -----DFLADDIKSQGSH 1099
Score = 323 bits (828), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/261 (62%), Positives = 191/261 (73%), Gaps = 21/261 (8%)
Query: 1 MDSQQTNLFETASQPDTGTDAYTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTT 60
MDSQQ++LF+TASQPDT D YTFLEFNTQG+S+FD Y +F SP +WPTPSDS+S+
Sbjct: 1 MDSQQSDLFDTASQPDTVADEYTFLEFNTQGDSEFD-YQDFGSPTAWPTPSDSISI---- 55
Query: 61 PVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNT-----STSQIV 115
A +D A+DHH + + A + RG S +
Sbjct: 56 ----ADVADRGEGGAAADHHSEASSPSSLSAGAGNGAKVGRGGVGGSGGVSSSSQVDALA 111
Query: 116 EGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 175
G+ L+FEETGDD +GF+YGK DFTEHAC+YCG+SNPACVVRCNV SCRKWFCNSRGNT
Sbjct: 112 AGVGNLNFEETGDD-DGFDYGKNDFTEHACKYCGISNPACVVRCNVASCRKWFCNSRGNT 170
Query: 176 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
SGSHIVNHLVRAKHKEVCLH+DSPLGETILECYNCGCRNVFLLGFISAKT+SVVVLLCR+
Sbjct: 171 SGSHIVNHLVRAKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFISAKTDSVVVLLCRD 230
Query: 236 PCLNMMKESQSKDNVTIRWDI 256
PCLN+ + KD + WD+
Sbjct: 231 PCLNV---NALKD---MNWDL 245
>gi|168016276|ref|XP_001760675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688035|gb|EDQ74414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1610
Score = 1307 bits (3383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/805 (80%), Positives = 698/805 (86%), Gaps = 20/805 (2%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MMKESQSKDN+T+RWD+GLNKKR+AYFVFPKEDNELRLVPGDELRLRY GD H WQSV
Sbjct: 595 MMKESQSKDNITVRWDVGLNKKRIAYFVFPKEDNELRLVPGDELRLRYPGDGTHSGWQSV 654
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
GHVIKLTAQEEVALELRA+QGVP+D+NH FSVDFVWKSTSFDRMQ AMKTFAVDETSVSG
Sbjct: 655 GHVIKLTAQEEVALELRANQGVPIDVNHNFSVDFVWKSTSFDRMQVAMKTFAVDETSVSG 714
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIYH LLGHEVE+Q VRNTLPRRFGAPGLPELNASQV+AVKSVLQ+P+SLIQGPPGTGKT
Sbjct: 715 YIYHRLLGHEVEMQTVRNTLPRRFGAPGLPELNASQVYAVKSVLQKPVSLIQGPPGTGKT 774
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYH+AKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL
Sbjct: 775 VTSAAIVYHLAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 834
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQVRHLDT++KSELHKLQ LKDE GELSSSDEKKYK+LKRATEREISQSADVICCTC
Sbjct: 835 TLHYQVRHLDTTDKSELHKLQLLKDELGELSSSDEKKYKSLKRATEREISQSADVICCTC 894
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFRQVL+DESTQATEPECLIPLVLGAKQ+VLVGDHCQLGPVIMCKKAAR
Sbjct: 895 VGAGDPRLANFRFRQVLVDESTQATEPECLIPLVLGAKQLVLVGDHCQLGPVIMCKKAAR 954
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERLVLLG+KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVT ++R S IDF
Sbjct: 955 AGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTTSDRLLSQIDF 1014
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVPNRPMFFYVQMGQEEISASGTSYLNR EA NVEKIVTTFL+SGVVP+QIGVITPYE
Sbjct: 1015 PWPVPNRPMFFYVQMGQEEISASGTSYLNRGEAGNVEKIVTTFLKSGVVPAQIGVITPYE 1074
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAYIVN M+RNG+LRQQLYKEIEVASVDSFQGREKD+II+SCVRSNEHQGIGFLNDPR
Sbjct: 1075 GQRAYIVNNMARNGSLRQQLYKEIEVASVDSFQGREKDFIIVSCVRSNEHQGIGFLNDPR 1134
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRAR+GIVILGNPKVLSKQPLWN LLTHYKEHE LVEG LNNLKQSMVQFQKPK
Sbjct: 1135 RLNVALTRARFGIVILGNPKVLSKQPLWNTLLTHYKEHEVLVEGSLNNLKQSMVQFQKPK 1194
Query: 840 KIYNDRRLF-------FGAGPGIVPNDISTSNPNA---DRRGSRARGYMPPGPPNGTHKP 889
K+YNDRR++ G G G VP +++ A DRR RAR + +
Sbjct: 1195 KVYNDRRVYPGGGAPALGPGEGFVPAATTSAATGAAANDRRNGRAR-----AKGGVSSQA 1249
Query: 890 GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAG 949
GL P+ VPL F P +QPYAIPSRG +HGP+GAV VP GSRGFGAGRGS
Sbjct: 1250 GLTPS----RGVPLTGFPSTPLTQPYAIPSRGGMHGPIGAVPQVPQAGSRGFGAGRGSTS 1305
Query: 950 APIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTF 1009
PIG HL Q QQ G +G F F L++ +Q S GGP+TQ G + M Q SQ
Sbjct: 1306 GPIGGHLSQHQTPQQQ-GALGGAFQFGGLDSPATQASAGGPMTQQGIMTQMQTQTLSQNL 1364
Query: 1010 RDGFSVGSMSQDFLGDDFKSQGSHV 1034
RDGF +G MSQDF G+DFKSQGSHV
Sbjct: 1365 RDGFGLGGMSQDFFGEDFKSQGSHV 1389
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/145 (68%), Positives = 119/145 (82%), Gaps = 11/145 (7%)
Query: 114 IVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRG 173
+ G++ L+FE+ GD+ + +Y K EHAC+YCG+ NPAC++RCNVP+CRKWFCNSRG
Sbjct: 367 LTSGISELNFEDPGDE-DSLDYSKRHLPEHACKYCGIHNPACIMRCNVPTCRKWFCNSRG 425
Query: 174 NTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLC 233
NTSGSHIVNHLVR+KHKEVCLH+DSPLGETILECYNCGCRNVFLLGFI AK+ESVVVLLC
Sbjct: 426 NTSGSHIVNHLVRSKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFIPAKSESVVVLLC 485
Query: 234 REPCL--NMMKESQSKDNVTIRWDI 256
REPCL N +K+ + WD+
Sbjct: 486 REPCLSVNGLKD--------MNWDL 502
>gi|358412841|ref|XP_001789963.2| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
Length = 1063
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/996 (57%), Positives = 700/996 (70%), Gaps = 108/996 (10%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 83 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 135
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 136 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 193
Query: 220 FISAKTESVVVLLC-------RE------------------------------------P 236
FI AK +SVVVLLC RE P
Sbjct: 194 FIPAKADSVVVLLCSPLTCQERENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGP 253
Query: 237 CLNM-------MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSG 289
+ + +KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY G
Sbjct: 254 LVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKG 313
Query: 290 DAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
D A P W+ +GHVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+
Sbjct: 314 DLA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSAL 372
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+
Sbjct: 373 KTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 432
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAK
Sbjct: 433 SLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 492
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREA+ SPV L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE
Sbjct: 493 SREAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERE 550
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQ
Sbjct: 551 LLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 610
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV
Sbjct: 611 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 670
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 671 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGA 730
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+N
Sbjct: 731 KPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN 790
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNN
Sbjct: 791 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNN 850
Query: 828 LKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP 879
L++S++QF KP+K+ N + A I+P + + +G + Y
Sbjct: 851 LRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQ 906
Query: 880 PGPPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG-- 937
G G P+ +P+P PP +PPPG
Sbjct: 907 THDQIGMISAG--PSHVAAMNIPIPFNLVMPP---------------------MPPPGYF 943
Query: 938 --SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPG 995
+ G AGRG+ G + + P + + N + ++ SQP G LTQ G
Sbjct: 944 GQANGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-G 1002
Query: 996 FVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+++ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1003 YIS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1035
>gi|414590338|tpg|DAA40909.1| TPA: hypothetical protein ZEAMMB73_069756 [Zea mays]
Length = 889
Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/532 (94%), Positives = 520/532 (97%)
Query: 239 NMMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQS 298
MMKESQSKDNVT+RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY GD++HP WQS
Sbjct: 355 KMMKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSHPTWQS 414
Query: 299 VGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
VGHVIKLTAQEEVALELRASQGVP ++N GFSVDFVWKSTSFDRMQGAMKTFAVDETSVS
Sbjct: 415 VGHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 474
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYHHLLGHEVE Q++RNTLPRRFGAPGLPELNASQV AVKSVLQ+P+SLIQGPPGTGK
Sbjct: 475 GYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGK 534
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEH
Sbjct: 535 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEH 594
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCT
Sbjct: 595 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCT 654
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAA
Sbjct: 655 CVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAA 714
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGLAQSLFERLV+LG+KP RLQVQYRMHP LSEFPSN FYEGTLQNGVT+NERQSSGID
Sbjct: 715 RAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGID 774
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY
Sbjct: 775 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 834
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
EGQRAYIVNYM+RNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ
Sbjct: 835 EGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 886
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/259 (53%), Positives = 168/259 (64%), Gaps = 16/259 (6%)
Query: 6 TNLFETASQPDT--GTDAYTFLEFNTQGES-DFDAYPEFRSPVSWPTPSDSLSVDPTTPV 62
+L+ETASQPD DAYTFLEFNTQG+ D+ +PE P TP S T
Sbjct: 13 VDLYETASQPDAPAAGDAYTFLEFNTQGDDFDYPDFPELSQPPPRSTPLTSSIPGAGTSS 72
Query: 63 TPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLS 122
+ + AS + H+ +++S + + + + + G+ L+
Sbjct: 73 SSWPAPPPPPSDAASPEPDLTSQDVHTPPASSSSPSPRSASKARPSAAADGLASGVVALN 132
Query: 123 FEE---TGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSH 179
FE+ TG +G++Y K DF EHACRYCG+ NPACV RCNVPSCRKWFCNSRGNTSGSH
Sbjct: 133 FEDPVGTGAVEDGYDYSKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSH 192
Query: 180 IVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCL- 238
IVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK E+VVVLLCREPCL
Sbjct: 193 IVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCREPCLS 252
Query: 239 -NMMKESQSKDNVTIRWDI 256
N +K+ + WD+
Sbjct: 253 VNALKD--------MNWDL 263
>gi|440792662|gb|ELR13871.1| mRNA decay factorlike protein [Acanthamoeba castellanii str. Neff]
Length = 1142
Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/805 (65%), Positives = 607/805 (75%), Gaps = 47/805 (5%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
MKESQ++ V+IRWD+GLNKKRVAYF+FPK DNELRLVPGDELRLR+ GD +H AW VG
Sbjct: 349 MKESQTQQGVSIRWDMGLNKKRVAYFLFPKSDNELRLVPGDELRLRHPGDGSHAAWNCVG 408
Query: 301 HVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGY 360
HV++LT EEVALELR++ G P+D++HGFSVDFVWK+TSFDRMQGAMKTFAVD+ S+SGY
Sbjct: 409 HVVRLTTNEEVALELRSNVGAPIDLSHGFSVDFVWKATSFDRMQGAMKTFAVDDQSLSGY 468
Query: 361 IYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTV 420
+YH LGHEVE Q R TLP+RF APGLPELN SQV AVKSVLQ+P+SLIQGPPGTGKTV
Sbjct: 469 LYHRFLGHEVEEQTFRVTLPKRFSAPGLPELNHSQVAAVKSVLQKPLSLIQGPPGTGKTV 528
Query: 421 TSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLT 480
TSA+ VY + KQ QGQVLVCAPSNVAVDQL EKI ATGLKVVRLCAKSREAVSSPVE LT
Sbjct: 529 TSASTVYQLVKQNQGQVLVCAPSNVAVDQLTEKIHATGLKVVRLCAKSREAVSSPVEFLT 588
Query: 481 LHYQVRHLDTS--EKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
LHY V+HL + +K EL KLQQLKD+QGELSS+DEKK+K+LKR+ EREI QSADVICCT
Sbjct: 589 LHYLVKHLASGSIDKGELAKLQQLKDDQGELSSADEKKFKSLKRSMEREILQSADVICCT 648
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL NFRFRQVLIDESTQATEPECL+PLVLGAKQV+ VGDHCQLGPVIMCKKAA
Sbjct: 649 CVGAGDPRLTNFRFRQVLIDESTQATEPECLLPLVLGAKQVIFVGDHCQLGPVIMCKKAA 708
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERL++LG++PIRLQVQYRMHP LSEFPSN+FYEGTLQNGVT ER +D
Sbjct: 709 RAGLSQSLFERLIMLGVRPIRLQVQYRMHPCLSEFPSNTFYEGTLQNGVTAAERNQGALD 768
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWPVPN+PMFFY +GQEEIS+SGTSYLNR EAA EKIVT FL++GV +QIGVITPY
Sbjct: 769 FPWPVPNKPMFFYNCLGQEEISSSGTSYLNRNEAAVCEKIVTHFLQAGVTSAQIGVITPY 828
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+VNYM RNG+LR QLYKEIEVASVDSFQGREKD+IILSCVRSNEHQGIGFLNDP
Sbjct: 829 EGQRAYLVNYMQRNGSLRSQLYKEIEVASVDSFQGREKDFIILSCVRSNEHQGIGFLNDP 888
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YG+V+LGN KVLS+QPLWN LL H+KE+ CLVEGPLNNLKQSMVQF +P
Sbjct: 889 RRLNVALTRAKYGVVVLGNAKVLSRQPLWNNLLVHFKENGCLVEGPLNNLKQSMVQFARP 948
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHPAGFPM 898
+K YNDR+ G GP + P++ +P+ R P P + L FP
Sbjct: 949 RKYYNDRKFIPGLGPALRPDE----DPSVYDRSL-------PAPASTDPAASLGRGRFPA 997
Query: 899 PRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSHLQH 958
Q G P + H +RG RG
Sbjct: 998 --------QAGYYPGPVPAAAHAGRHADAWNAQQQQQQRTRGAPRARGG----------R 1039
Query: 959 QQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPV-QGPSQTFRDGFSVG- 1016
+ ++P + G + + S+ GPLTQP ++P+ Q S F G
Sbjct: 1040 KDRVERPRESFGDSSTQAGMSYSSQ-----GPLTQPLLTQSLPLSQQSSLPFSQQSDRGL 1094
Query: 1017 -------SMSQD--FLGDDFKSQGS 1032
S SQD F+ DDF G+
Sbjct: 1095 SYPISQPSQSQDFQFVEDDFSQDGA 1119
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 148/238 (62%), Gaps = 14/238 (5%)
Query: 22 YTFLEFNTQGESDFDAYPEFRSPVSWPTPSDSLSVDPTTPVTPATPSDSRSAPPASDHHH 81
++FLE TQG S++D YPEF + + + + +L D + ++ S + +S
Sbjct: 31 FSFLEIPTQG-SEYD-YPEFTNTSATASQASALG-DDGSQSQLSSVSSTYPFSSSSMASS 87
Query: 82 HHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEET--GDDVEGFEYGKAD 139
HN + G + T+ + + L FEE DD+ G ++ K
Sbjct: 88 LHNDGTQHLASQHLHHHHAHGMMLPHDVDTA--ADALRDLHFEEAFEDDDLAGEDFNKK- 144
Query: 140 FTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSP 199
HAC YCGV NPACVVRCNVPSCRKWFCN RG+TSGSHI+NHLVRAKHKEVCLH DSP
Sbjct: 145 LPPHACNYCGVHNPACVVRCNVPSCRKWFCNGRGSTSGSHIINHLVRAKHKEVCLHADSP 204
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIG 257
LG+TILECYNCGC+NVFLLGFI AKTESVVVLLCR+PC N + KD + WD+
Sbjct: 205 LGDTILECYNCGCKNVFLLGFIPAKTESVVVLLCRDPCANA---TGLKD---MNWDLA 256
>gi|334326682|ref|XP_003340788.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Monodelphis domestica]
Length = 1122
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/808 (60%), Positives = 599/808 (74%), Gaps = 55/808 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 324 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 382
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 383 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 442
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 443 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 502
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 503 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 562
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 563 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 620
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 621 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 680
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 681 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 740
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 741 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 800
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 801 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 860
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 861 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 920
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 921 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISTG 976
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 977 --PSHVTAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1013
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSN---SQPSVGGPLTQPGFVNNMPVQ 1003
+ G + + P GT S N P+ + S SQP GPLTQ G+++ +
Sbjct: 1014 TPKGKTGRGGRQKNRFGIP-GT--SQSNLPNSQASQDVVSQPFSQGPLTQ-GYIS---MS 1066
Query: 1004 GPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1067 QPSQMSQPGLSQPELSQDSYLGDEFKSQ 1094
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 89 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 141
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 142 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 199
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 200 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 229
>gi|148223321|ref|NP_001085862.1| MGC80941 protein [Xenopus laevis]
gi|49116641|gb|AAH73441.1| MGC80941 protein [Xenopus laevis]
Length = 1098
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/812 (60%), Positives = 601/812 (74%), Gaps = 62/812 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 299 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 357
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 358 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 417
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 418 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 477
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 478 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 537
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++++ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 538 LALHNQIRNMES--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 595
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 596 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 655
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 656 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 715
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 716 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 775
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 776 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 835
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 836 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 895
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKP- 889
+K+ N + A I+P + R S+ R P TH
Sbjct: 896 RKLVNTINPGARFMTTAMYDAREAIIPGSVYD-------RSSQGR---PSNMYFQTHDQI 945
Query: 890 ---GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRG 946
G P+ +P+P PP +PPPG FG G
Sbjct: 946 GMIGSGPSHVTAMNIPIPFNLVMPP---------------------MPPPGY--FGQANG 982
Query: 947 SA---GAPIGSHLQHQQNTQQPIGTIG-STFNFPSLENSN---SQPSVGGPLTQPGFVNN 999
A G P G + + Q+ IG G S N P+ + S SQP GPLTQ G+++
Sbjct: 983 PAPGRGMPKGKSTRGGRPKQRGIGLQGMSQGNMPNSQASQDVVSQPFSQGPLTQ-GYIS- 1040
Query: 1000 MPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+ PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1041 --MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1070
Score = 186 bits (471), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 106/152 (69%), Gaps = 12/152 (7%)
Query: 104 NNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPS 163
N + + + + + L+FEE +D Y D HAC YCG+ +PACVV CN +
Sbjct: 65 NGTVDDGVGKTSQLLGELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYCN--T 118
Query: 164 CRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA 223
+KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLGFI A
Sbjct: 119 SKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPA 178
Query: 224 KTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
K +SVVVLLCR+PC + +S KD I WD
Sbjct: 179 KADSVVVLLCRQPCAS---QSSLKD---INWD 204
>gi|395513182|ref|XP_003760808.1| PREDICTED: regulator of nonsense transcripts 1 [Sarcophilus harrisii]
Length = 1050
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/808 (60%), Positives = 599/808 (74%), Gaps = 55/808 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 252 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 310
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 311 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 370
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 371 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 430
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 431 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 490
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 491 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 548
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 549 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 608
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 609 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 668
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 669 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 728
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 729 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 788
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 789 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 848
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 849 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISTG 904
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 905 --PSHVTAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 941
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSN---SQPSVGGPLTQPGFVNNMPVQ 1003
+ G + + P GT S N P+ + S SQP GPLTQ G+++ +
Sbjct: 942 TPKGKTGRGGRQKNRFGIP-GT--SQANLPNSQASQDVVSQPFSQGPLTQ-GYIS---MS 994
Query: 1004 GPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 995 QPSQMSQPGLSQPELSQDSYLGDEFKSQ 1022
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 17 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 69
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 70 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 127
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 128 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 157
>gi|387017334|gb|AFJ50785.1| Regulator of nonsense transcripts 1-like [Crotalus adamanteus]
Length = 1131
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 334 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 392
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 393 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 452
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 453 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 512
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 513 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 572
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 573 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 630
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 631 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 690
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 691 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 750
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 751 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 810
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 811 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 870
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 871 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 930
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 931 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 986
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 987 --PSHVTTMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1023
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + N + ++ SQP GPLTQ G+++ + PS
Sbjct: 1024 NLKGKAGRGGRQKNRFGIPGAGQSNLPNSQASQDVVSQPFSQGPLTQ-GYIS---MSQPS 1079
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1080 QMSQPGLSQPELSQDSYLGDEFKSQ 1104
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + + TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 99 QNGAVDDNVPKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 151
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 152 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 209
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 210 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 239
>gi|363743891|ref|XP_418237.3| PREDICTED: regulator of nonsense transcripts 1 [Gallus gallus]
Length = 1096
Score = 959 bits (2479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/808 (60%), Positives = 599/808 (74%), Gaps = 55/808 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 298 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 356
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 357 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 416
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 417 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 476
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 477 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 536
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 537 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 594
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 595 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 654
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 655 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 714
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 715 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 774
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 775 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 834
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 835 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 894
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 895 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 950
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 951 --PSHVTAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 987
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSN---SQPSVGGPLTQPGFVNNMPVQ 1003
+ G + + P GT S N P+ + S SQP GPLTQ G+++ +
Sbjct: 988 APKGKTGRGGRQKNRFGIP-GT--SQSNLPNSQASQDVVSQPFSQGPLTQ-GYIS---MS 1040
Query: 1004 GPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1041 QPSQMSQPGLSQPELSQDSYLGDEFKSQ 1068
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + + TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 63 QNGAVDDNVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 115
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 116 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 173
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 174 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 203
>gi|395847959|ref|XP_003796631.1| PREDICTED: regulator of nonsense transcripts 1 [Otolemur garnettii]
Length = 1118
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 320 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 378
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 379 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 438
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 439 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 498
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 499 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 558
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 559 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 616
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 617 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 676
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 677 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 736
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 737 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 796
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 797 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 856
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 857 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 916
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 917 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 972
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 973 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1009
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1010 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1065
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1066 QMSQPGLSQPELSQDSYLGDEFKSQ 1090
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 85 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 137
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 138 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 195
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 196 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 225
>gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens]
gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens]
gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens]
gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo sapiens]
gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b
[Homo sapiens]
gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b
[Homo sapiens]
gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b
[Homo sapiens]
gi|383420499|gb|AFH33463.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|383420501|gb|AFH33464.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|387540714|gb|AFJ70984.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|410220482|gb|JAA07460.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
gi|410307484|gb|JAA32342.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1118
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 320 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 378
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 379 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 438
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 439 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 498
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 499 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 558
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 559 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 616
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 617 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 676
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 677 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 736
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 737 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 796
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 797 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 856
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 857 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 916
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 917 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 972
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 973 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1009
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1010 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1065
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1066 QMSQPGLSQPELSQDSYLGDEFKSQ 1090
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 85 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 137
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 138 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 195
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 196 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 225
>gi|384939998|gb|AFI33604.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|384940000|gb|AFI33605.1| regulator of nonsense transcripts 1 [Macaca mulatta]
Length = 1118
Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 320 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 378
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 379 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 438
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 439 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 498
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 499 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 558
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 559 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 616
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 617 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 676
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 677 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 736
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 737 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 796
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 797 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 856
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 857 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 916
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 917 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 972
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 973 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1009
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1010 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1065
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1066 QMSQPGLSQPELSQDSYLGDEFKSQ 1090
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 85 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 137
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 138 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 195
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 196 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 225
>gi|281343547|gb|EFB19131.1| hypothetical protein PANDA_000565 [Ailuropoda melanoleuca]
Length = 1122
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 324 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 382
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 383 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 442
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 443 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 502
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 503 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 562
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 563 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 620
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 621 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 680
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 681 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 740
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 741 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 800
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 801 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 860
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 861 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 920
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 921 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 976
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 977 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1013
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1014 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1069
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1070 QMSQPGLSQPELSQDSYLGDEFKSQ 1094
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 89 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 141
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 142 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 199
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 200 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 229
>gi|417413396|gb|JAA53027.1| Putative dna replication helicase, partial [Desmodus rotundus]
Length = 1052
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/809 (60%), Positives = 597/809 (73%), Gaps = 57/809 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 254 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 312
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 313 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 372
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 373 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 432
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 433 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 492
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 493 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 550
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 551 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 610
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 611 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 670
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 671 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 730
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 731 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 790
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 791 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 850
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 851 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQLGMISAG 906
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 907 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 943
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIG-STFNFPSLENSN---SQPSVGGPLTQPGFVNNMPV 1002
+ G + + G G S N PS + S SQP G LTQ G+++ +
Sbjct: 944 TPKGKTGRGGRQKNR----FGLPGPSQTNLPSSQASQDVASQPFSQGALTQ-GYIS---M 995
Query: 1003 QGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 996 SQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1024
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 19 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 71
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 72 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 129
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 130 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 159
>gi|297476262|ref|XP_002688572.1| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
gi|296486196|tpg|DAA28309.1| TPA: UPF1 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1116
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 318 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 376
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 377 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 436
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 437 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 496
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 497 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 556
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 557 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 614
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 615 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 674
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 675 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 734
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 735 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 794
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 795 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 854
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 855 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 914
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 915 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 970
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 971 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1007
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1008 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1063
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1064 QMSQPGLSQPELSQDSYLGDEFKSQ 1088
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 83 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 135
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 136 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 193
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 194 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 223
>gi|73986070|ref|XP_533868.2| PREDICTED: regulator of nonsense transcripts 1 [Canis lupus
familiaris]
Length = 1119
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 321 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 379
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 380 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 439
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 440 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 499
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 500 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 559
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 560 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 617
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 618 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 677
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 678 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 737
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 738 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 797
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 798 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 857
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 858 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 917
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 918 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 973
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 974 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1010
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1011 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1066
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1067 QMSQPGLSQPELSQDSYLGDEFKSQ 1091
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 86 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 138
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 139 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 196
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 197 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 226
>gi|354473860|ref|XP_003499150.1| PREDICTED: regulator of nonsense transcripts 1-like [Cricetulus
griseus]
Length = 1061
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 598/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+A+F PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 263 LKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 321
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 322 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 381
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 382 GYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 441
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 442 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 501
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 502 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 559
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 560 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 619
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 620 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 679
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 680 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 739
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 740 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 799
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL++YKE + LVEGPLNNL++S++QF KP
Sbjct: 800 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNNLRESLMQFSKP 859
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 860 RKLVNTVNPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 915
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 916 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 952
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ + G + + P + + N + ++ SQP G LTQ G+V+ + PS
Sbjct: 953 TPKSKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGALTQ-GYVS---MSQPS 1008
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1009 QMSQPGLSQPELSQDSYLGDEFKSQ 1033
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 28 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 80
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 81 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 138
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 139 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 168
>gi|194223788|ref|XP_001915294.1| PREDICTED: regulator of nonsense transcripts 1 [Equus caballus]
Length = 1079
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 281 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 339
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 340 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 399
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 400 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 459
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 460 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 519
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 520 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 577
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 578 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 637
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 638 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 697
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 698 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 757
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 758 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 817
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 818 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 877
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 878 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 933
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 934 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 970
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 971 TPKGKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1026
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1027 QMSQPGLSQPELSQDSYLGDEFKSQ 1051
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 46 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 98
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 99 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 156
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 157 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 186
>gi|431922030|gb|ELK19203.1| Regulator of nonsense transcripts 1 [Pteropus alecto]
Length = 1087
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/809 (60%), Positives = 597/809 (73%), Gaps = 57/809 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 289 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 347
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 348 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 407
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 408 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 467
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 468 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 527
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 528 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 585
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 586 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 645
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT ER G D
Sbjct: 646 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAAERVKKGFD 705
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 706 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 765
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 766 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 825
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 826 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 885
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 886 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQLGMISAG 941
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 942 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 978
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIG-STFNFPSLENSN---SQPSVGGPLTQPGFVNNMPV 1002
+ G + + G G S N PS + S SQP G LTQ G+++ +
Sbjct: 979 TPKGKTGRGGRQKNR----FGLPGPSQTNLPSSQASQDVASQPFSQGALTQ-GYIS---M 1030
Query: 1003 QGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1031 SQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1059
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 54 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 106
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 107 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 164
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 165 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 194
>gi|1885356|gb|AAC51140.1| homolog of yeast UPF1 [Homo sapiens]
Length = 1118
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 595/805 (73%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 320 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 378
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 379 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 438
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + + LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 439 GYIYHKLLGHEVEDVITKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 498
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 499 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 558
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 559 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 616
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 617 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 676
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 677 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 736
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 737 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 796
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 797 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 856
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 857 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 916
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 917 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 972
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 973 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1009
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1010 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1065
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1066 QMSQPGLSQPELSQDSYLGDEFKSQ 1090
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 85 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 137
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 138 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 195
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 196 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 225
>gi|109504000|ref|XP_001070971.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1 [Rattus
norvegicus]
gi|392353861|ref|XP_003751615.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2 [Rattus
norvegicus]
gi|149036014|gb|EDL90680.1| rCG38820 [Rattus norvegicus]
Length = 1113
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/809 (59%), Positives = 598/809 (73%), Gaps = 57/809 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+A+F PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 315 LKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 373
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 374 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 433
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 434 GYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 493
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 494 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 553
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 554 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 611
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 612 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 671
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 672 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 731
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 732 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 791
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 792 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 851
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL++YKE + LVEGPLNNL++S++QF KP
Sbjct: 852 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNNLRESLMQFSKP 911
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKP- 889
+K+ N + A I+P + R S+ R P TH
Sbjct: 912 RKLVNTVNPGARFMTTAMYDAREAIIPGSVYD-------RSSQGR---PSNMYFQTHDQI 961
Query: 890 ---GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFG 942
P+ +P+P PP +PPPG + G
Sbjct: 962 SMISAGPSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPA 1000
Query: 943 AGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPV 1002
AGRG+ + G + + P + + N + ++ SQP G LTQ G+V+ +
Sbjct: 1001 AGRGTPKSKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGALTQ-GYVS---M 1056
Query: 1003 QGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1057 SQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1085
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 80 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 132
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 133 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 190
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 191 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 220
>gi|402904861|ref|XP_003915257.1| PREDICTED: regulator of nonsense transcripts 1, partial [Papio
anubis]
Length = 1041
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 243 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 301
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 302 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 361
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 362 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 421
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 422 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 481
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 482 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 539
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 540 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 599
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 600 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 659
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 660 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 719
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 720 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 779
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 780 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 839
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 840 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 895
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 896 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 932
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 933 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 988
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 989 QMSQPGLSQPELSQDSYLGDEFKSQ 1013
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 8 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 60
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 61 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 118
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 119 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 148
>gi|380800401|gb|AFE72076.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
gi|380800403|gb|AFE72077.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
Length = 1064
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 266 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 324
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 325 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 384
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 385 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 444
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 445 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 504
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 505 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 562
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 563 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 622
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 623 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 682
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 683 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 742
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 743 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 802
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 803 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 862
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 863 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 918
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 919 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 955
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 956 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1011
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1012 QMSQPGLSQPELSQDSYLGDEFKSQ 1036
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 31 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 83
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 84 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 141
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 142 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 171
>gi|426387932|ref|XP_004060416.1| PREDICTED: regulator of nonsense transcripts 1 [Gorilla gorilla
gorilla]
Length = 1055
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 257 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 315
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 316 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 375
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 376 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 435
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 436 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 495
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 496 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 553
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 554 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 613
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 614 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 673
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 674 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 733
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 734 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 793
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 794 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 853
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 854 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 909
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 910 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 946
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 947 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1002
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1003 QMSQPGLSQPELSQDSYLGDEFKSQ 1027
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 22 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 74
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 75 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 132
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 133 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 162
>gi|12836885|gb|AAK08652.1|AF182947_1 nonsense mRNA reducing factor 1 NORF1 [Mus musculus]
Length = 1113
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/809 (59%), Positives = 597/809 (73%), Gaps = 57/809 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+A+F PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 315 LKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 373
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 374 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 433
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 434 GYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 493
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 494 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 553
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 554 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 611
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 612 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 671
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 672 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 731
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 732 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 791
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 792 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 851
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL++YKE + LVEGPLNNL++S++QF KP
Sbjct: 852 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNNLRESLMQFSKP 911
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKP- 889
+K+ N + A I+P + R S+ R P TH
Sbjct: 912 RKLVNTVNPGARFMTTAMYDAREAIIPGSVYD-------RSSQGR---PSNMYFQTHDQI 961
Query: 890 ---GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFG 942
P+ +P+P PP +PPPG + G
Sbjct: 962 SMISAGPSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPA 1000
Query: 943 AGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPV 1002
AGRG+ G + + P + + N + ++ SQP G LTQ G+V+ +
Sbjct: 1001 AGRGTPKTKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGALTQ-GYVS---M 1056
Query: 1003 QGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1057 SQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1085
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 80 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 132
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 133 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 190
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 191 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 220
>gi|170784811|ref|NP_109605.2| regulator of nonsense transcripts 1 isoform b [Mus musculus]
gi|11993646|gb|AAG42830.1|AF322655_1 regulator of nonsense transcripts 1 [Mus musculus]
gi|30354613|gb|AAH52149.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Mus musculus]
gi|148696867|gb|EDL28814.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b
[Mus musculus]
Length = 1113
Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/809 (59%), Positives = 597/809 (73%), Gaps = 57/809 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+A+F PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 315 LKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 373
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 374 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 433
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 434 GYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 493
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 494 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 553
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 554 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 611
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 612 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 671
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 672 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 731
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 732 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 791
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 792 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 851
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL++YKE + LVEGPLNNL++S++QF KP
Sbjct: 852 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNNLRESLMQFSKP 911
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKP- 889
+K+ N + A I+P + R S+ R P TH
Sbjct: 912 RKLVNTVNPGARFMTTAMYDAREAIIPGSVYD-------RSSQGR---PSNMYFQTHDQI 961
Query: 890 ---GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFG 942
P+ +P+P PP +PPPG + G
Sbjct: 962 SMISAGPSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPA 1000
Query: 943 AGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPV 1002
AGRG+ G + + P + + N + ++ SQP G LTQ G+V+ +
Sbjct: 1001 AGRGTPKTKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGALTQ-GYVS---M 1056
Query: 1003 QGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1057 SQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1085
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 80 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 132
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 133 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 190
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 191 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 220
>gi|297276540|ref|XP_002808229.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Macaca mulatta]
Length = 1096
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 298 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYXGDLA-PLWKGIG 356
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 357 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 416
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 417 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 476
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 477 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 536
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 537 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 594
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 595 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 654
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 655 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 714
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 715 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 774
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 775 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 834
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 835 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 894
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 895 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 950
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 951 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 987
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 988 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1043
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1044 QMSQPGLSQPELSQDSYLGDEFKSQ 1068
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 63 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 115
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 116 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 173
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 174 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 203
>gi|397493981|ref|XP_003817874.1| PREDICTED: regulator of nonsense transcripts 1 [Pan paniscus]
Length = 1053
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 255 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 313
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 314 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 373
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 374 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 433
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 434 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 493
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 494 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 551
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 552 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 611
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 612 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 671
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 672 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 731
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 732 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 791
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 792 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 851
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 852 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 907
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 908 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 944
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 945 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1000
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1001 QMSQPGLSQPELSQDSYLGDEFKSQ 1025
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 20 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 72
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 73 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 130
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 131 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 160
>gi|410950946|ref|XP_003982163.1| PREDICTED: regulator of nonsense transcripts 1 [Felis catus]
Length = 1055
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 257 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 315
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 316 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 375
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 376 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 435
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 436 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 495
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 496 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 553
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 554 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 613
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 614 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 673
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 674 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 733
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 734 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 793
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 794 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 853
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 854 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 909
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 910 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 946
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 947 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1002
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1003 QMSQPGLSQPELSQDSYLGDEFKSQ 1027
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/166 (57%), Positives = 114/166 (68%), Gaps = 15/166 (9%)
Query: 90 DSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCG 149
D++ + GA + + TSQ+ +A L+FEE +D Y D HAC YCG
Sbjct: 12 DAVGGPEGILQNGAVDDNVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCG 64
Query: 150 VSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYN 209
+ +PACVV CN + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYN
Sbjct: 65 IHDPACVVYCN--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYN 122
Query: 210 CGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
CGCRNVFLLGFI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 123 CGCRNVFLLGFIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 162
>gi|296233329|ref|XP_002761973.1| PREDICTED: regulator of nonsense transcripts 1, partial [Callithrix
jacchus]
Length = 1164
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 366 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 424
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 425 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 484
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 485 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 544
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 545 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 604
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 605 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 662
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 663 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 722
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 723 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 782
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 783 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 842
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 843 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 902
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 903 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 962
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 963 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 1018
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 1019 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1055
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1056 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1111
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1112 QMSQPGLSQPELSQDSYLGDEFKSQ 1136
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 131 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 183
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 184 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 241
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 242 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 271
>gi|149639074|ref|XP_001514946.1| PREDICTED: regulator of nonsense transcripts 1 [Ornithorhynchus
anatinus]
Length = 1113
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/809 (60%), Positives = 596/809 (73%), Gaps = 58/809 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 317 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 375
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 376 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 435
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 436 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 495
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 496 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 555
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 556 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 613
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 614 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 673
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 674 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 733
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 734 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 793
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 794 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 853
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 854 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 913
Query: 839 KKIYND--------RRLFFGAGPGIVPNDI----STSNP-NADRRGSRARGYMPPGPPNG 885
+K+ N + A I+P + S P N + G + GP
Sbjct: 914 RKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNLYFQTHDQIGMISAGPS-- 971
Query: 886 THKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGR 945
H A +P +P P Y G +GP AGR
Sbjct: 972 ------HVAAMNIP-IPFNLMMPPMPPPGYF----GQANGP---------------AAGR 1005
Query: 946 GSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSN---SQPSVGGPLTQPGFVNNMPV 1002
G+ G + + G G + N P+ + S SQP GPLTQ G+++ +
Sbjct: 1006 GTPKGKTGRGGRQKNR----FGIPGPSTNIPNSQASQDVVSQPFSQGPLTQ-GYIS---M 1057
Query: 1003 QGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1058 SQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1086
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 112/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA ++S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 82 QNGAVDNSVAKTSQL---LAELNFEEDEEDA----YYTKDLPVHACSYCGIHDPACVVYC 134
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 135 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 192
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 193 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 222
>gi|344283632|ref|XP_003413575.1| PREDICTED: regulator of nonsense transcripts 1-like [Loxodonta
africana]
Length = 1117
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/809 (59%), Positives = 595/809 (73%), Gaps = 57/809 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 319 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 377
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 378 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 437
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 438 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 497
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 498 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 557
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 558 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 615
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 616 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 675
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 676 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 735
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 736 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 795
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 796 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 855
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 856 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 915
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 916 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 971
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G GRG
Sbjct: 972 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPATGRG 1008
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIG-STFNFPSLENSN---SQPSVGGPLTQPGFVNNMPV 1002
+ G + + G G S PS + S SQP G LTQ G+V+ +
Sbjct: 1009 TPKGKTGRGGRQKNR----FGLSGPSQTTLPSSQASQDVVSQPFSQGALTQ-GYVS---M 1060
Query: 1003 QGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1061 SQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1089
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 84 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 136
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 137 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 194
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 195 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 224
>gi|441628692|ref|XP_004089387.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
[Nomascus leucogenys]
Length = 1163
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 365 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 423
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 424 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 483
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 484 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 543
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 544 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 603
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 604 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 661
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 662 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 721
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 722 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 781
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 782 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 841
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 842 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 901
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 902 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 961
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 962 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 1017
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 1018 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1054
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1055 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1110
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1111 QMSQPGLSQPELSQDSYLGDEFKSQ 1135
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 130 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 182
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 183 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 240
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 241 FIPAKADSVVVLLCRQPCAS---QSXLKD---INWD 270
>gi|403303596|ref|XP_003942412.1| PREDICTED: regulator of nonsense transcripts 1 [Saimiri boliviensis
boliviensis]
Length = 1257
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/805 (59%), Positives = 596/805 (74%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 459 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 517
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 518 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 577
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 578 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 637
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 638 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 697
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 698 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 755
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 756 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 815
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 816 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 875
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 876 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 935
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 936 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 995
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 996 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 1055
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 1056 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 1111
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 1112 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1148
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1149 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1204
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1205 QMSQPGLSQPELSQDSYLGDEFKSQ 1229
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 224 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 276
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 277 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 334
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 335 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 364
>gi|428177002|gb|EKX45884.1| hypothetical protein GUITHDRAFT_159666 [Guillardia theta CCMP2712]
Length = 1030
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/682 (68%), Positives = 545/682 (79%), Gaps = 28/682 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
MKE Q+K+++ + WDIGLN KR+AYF+F K++ E+RL+PGDEL+L+++ W S+G
Sbjct: 319 MKEQQTKEDLVVHWDIGLNNKRIAYFMFAKDEGEIRLMPGDELKLKFNDGLKQ--WSSIG 376
Query: 301 HVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGY 360
HVI+ + EEVALE+R P++ HGFSV+FVWKST++DRMQ AM+TFAVDETSVSGY
Sbjct: 377 HVIEKPSSEEVALEIRNGNNAPIEATHGFSVEFVWKSTTYDRMQSAMRTFAVDETSVSGY 436
Query: 361 IYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTV 420
+YH LLGH+VE Q +R +LP RF APGLPELN SQVFAVKSVLQ+P+S+IQGPPGTGKTV
Sbjct: 437 LYHRLLGHDVEPQPIRCSLPNRFSAPGLPELNHSQVFAVKSVLQQPLSVIQGPPGTGKTV 496
Query: 421 TSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLT 480
TSA IVYH+++ G GQVLV APSNVAVD L EKI TGLKVVR+CAKSREA+ S VE LT
Sbjct: 497 TSACIVYHLSRMGHGQVLVTAPSNVAVDHLTEKIHKTGLKVVRMCAKSREAIGSSVEQLT 556
Query: 481 LHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCV 540
LHYQV+HLDTS+K+E KLQQLK E GELS+ DEKKYK LKRATERE+ +ADVIC TCV
Sbjct: 557 LHYQVQHLDTSDKAEFRKLQQLKKELGELSTQDEKKYKQLKRATERELLMAADVICTTCV 616
Query: 541 GAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
GAGD RL FRF +VL+DE TQATEPECLIP+ +GAKQ+VLVGDHCQLGPV+MCKKAA+A
Sbjct: 617 GAGDARLNGFRFTKVLVDECTQATEPECLIPIAMGAKQLVLVGDHCQLGPVVMCKKAAKA 676
Query: 601 GLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
GL QSLFER+V LG+KP+RLQVQYRMHP LSEFPSN+FYEGTLQNGVT ER + IDFP
Sbjct: 677 GLQQSLFERMVNLGVKPVRLQVQYRMHPILSEFPSNTFYEGTLQNGVTHAERHAHAIDFP 736
Query: 661 WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEG 720
WPV ++PM FY+ G EE+SASGTSYLNRTEA+NVEKIVT FL+ GVVP QIG+ITPYEG
Sbjct: 737 WPVASKPMMFYISTGAEELSASGTSYLNRTEASNVEKIVTRFLKGGVVPEQIGIITPYEG 796
Query: 721 QRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
QRAYIV YMSRNG+LR+QLY E+EVASVD+FQGREKD+IILSCVRSNE + IGF+N+PRR
Sbjct: 797 QRAYIVQYMSRNGSLRKQLYNELEVASVDAFQGREKDFIILSCVRSNEGKSIGFVNNPRR 856
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 840
LNVALTRARYG+VILGNPKVL+KQPLWN LL H+K+HECLVEGPLNNLKQSM+QFQKP K
Sbjct: 857 LNVALTRARYGVVILGNPKVLAKQPLWNNLLCHFKQHECLVEGPLNNLKQSMMQFQKPHK 916
Query: 841 IYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHPAGFPMPR 900
R +P DR RA Y GPP PGL+ AG P
Sbjct: 917 REGGR------------------DPEYDR---RAVPYSFDGPP-----PGLNFAGGSGPP 950
Query: 901 VPLPPFQGGPPSQPYAIPSRGA 922
F GG Q S+G+
Sbjct: 951 NNRMDFYGGGNMQTQEALSQGS 972
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 101/161 (62%), Gaps = 24/161 (14%)
Query: 136 GKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT-SGSHIVNHLVRAKHKEVCL 194
G + HAC YCG+ NP+CVVRC KWFCNS GN SGS IVNHLVR+K KEV L
Sbjct: 112 GSRELPAHACAYCGIHNPSCVVRC--IKTGKWFCNSSGNKFSGSCIVNHLVRSKQKEVSL 169
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNM--MKESQSKDNVTI 252
H+DSPLGET+LECYNCG RNVF+LGFI AK E VVVLLCR+ C+ MK+S
Sbjct: 170 HRDSPLGETVLECYNCGERNVFMLGFIPAKQEQVVVLLCRQ-CVQAGGMKDS-------- 220
Query: 253 RWDIGL-------NKKRVAYFVFPK---EDNELRLVPGDEL 283
WD+ L NK + + V P E + RL+ +L
Sbjct: 221 NWDLSLWLPLIDSNKSFLPWLVKPPSQFEQSRARLLTATQL 261
>gi|405953739|gb|EKC21342.1| Regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 1108
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/816 (60%), Positives = 589/816 (72%), Gaps = 62/816 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+ +RWD+GLNKKR+A+F PK ++E++L+ GDELRLRY G+ H W VG
Sbjct: 303 LKESQTQDNIVVRWDVGLNKKRIAFFHLPKANDEMKLMHGDELRLRYQGEL-HKPWSGVG 361
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +EVA+EL+++ GVP + H F VDFVWKSTSFDRMQ A+KTFAVDETSV
Sbjct: 362 HVIKIPDNHSDEVAIELKSNAGVPSECTHNFVVDFVWKSTSFDRMQAALKTFAVDETSVW 421
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF P LPELN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 422 GYIYHKLLGHEVEDVVIKCQLPKRFSVPNLPELNHSQVYAVKTVLQRPLSLIQGPPGTGK 481
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+ KQ GQVLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 482 TVTSATIVYHLVKQNNGQVLVCAPSNIAVDQLTEKIHKTGLKVVRLCAKSREAIDSPVSF 541
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++++ EL KLQQLKDE GELSS+DEK+Y++LK+ E+E+ Q ADVICCT
Sbjct: 542 LALHNQIRNMESV--PELQKLQQLKDETGELSSTDEKRYRSLKKQCEKELLQHADVICCT 599
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVG GDPRLA +FR VLIDESTQATEPEC+IP+VLG +Q++LVGDHCQLGPV+MCKKAA
Sbjct: 600 CVGTGDPRLAKMQFRSVLIDESTQATEPECMIPVVLGCRQLILVGDHCQLGPVVMCKKAA 659
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV +R G+D
Sbjct: 660 RAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVAPGDRVRKGLD 719
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
PWP ++PMFFY GQEEIS+SGTSYLNRTEAANVEKI T FLRS V P QIG+ITPY
Sbjct: 720 IPWPQGDKPMFFYTTSGQEEISSSGTSYLNRTEAANVEKIATRFLRSNVKPEQIGIITPY 779
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAYIV YM +G+L ++LY+EIEVASVD+FQGREKD+IILSCVRSNEHQGIGFLNDP
Sbjct: 780 EGQRAYIVQYMQYSGSLNKKLYQEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDP 839
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LLT+YKE +CLVEGPLNNLK+SM+QF KP
Sbjct: 840 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLTYYKEQKCLVEGPLNNLKESMIQFSKP 899
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPP---------- 880
+K+ N + F A ++P + R+RGY P
Sbjct: 900 RKLVNTSNPGGRFMSNIMFDAREVLIPGSVY----------DRSRGYNEPVVRTHDQLSY 949
Query: 881 -GPPNGTHKPGLH---PAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPP 936
GP P L+ P MP +P PF G QP + +R A P
Sbjct: 950 IGPERQYTGPALNIPVPVNMFMPPMP-QPFNG----QPMPMGNRNA-------------P 991
Query: 937 GSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGF 996
RG G RG + Q ++Q G S SQP GPLTQ
Sbjct: 992 AQRGTGRRRGQKPPRYSNTQSQQNSSQYSQGNSQS-----QASQDVSQPFSQGPLTQGPM 1046
Query: 997 VNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQG 1031
+ P Q SQ G S +SQD FL DDFKSQ
Sbjct: 1047 SMSQPFQM-SQPGLSGLSQPELSQDSFLADDFKSQA 1081
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 103/142 (72%), Gaps = 12/142 (8%)
Query: 114 IVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRG 173
I +G+ L+FEE E ++ D +HAC YCG+ +PA VV CN S +KWFCN RG
Sbjct: 79 IAQGVGELTFEEE----EEEQFMMKDLPKHACSYCGIHDPASVVYCN--STKKWFCNGRG 132
Query: 174 NTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLC 233
NTSGSHI+NHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLGFI AK +SVVVLLC
Sbjct: 133 NTSGSHIINHLVRAKAKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLC 192
Query: 234 REPCLNMMKESQSKDNVTIRWD 255
R+PC + + KD + WD
Sbjct: 193 RQPCATL---TNLKD---MNWD 208
>gi|291243686|ref|XP_002741733.1| PREDICTED: regulator of nonsense transcripts 1-like, partial
[Saccoglossus kowalevskii]
Length = 974
Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/822 (60%), Positives = 588/822 (71%), Gaps = 64/822 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+ IRWDIGLNKKR++YF FP+ D +L+L+ GDELRLRY G+ H W VG
Sbjct: 166 LKESQTQDNIVIRWDIGLNKKRISYFNFPRRDGDLKLMHGDELRLRYLGEL-HKPWSGVG 224
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HV+K+ +EV +EL+++ GVP + H F VDFVWKSTSFDRMQ AMKTFAVDETSVS
Sbjct: 225 HVVKIPDNYGDEVGIELKSNAGVPTECTHNFVVDFVWKSTSFDRMQSAMKTFAVDETSVS 284
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +V+ LP+RF APGLPELN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 285 GYIYHKLLGHEVEEVVVKCNLPKRFSAPGLPELNHSQVYAVKTVLQRPLSLIQGPPGTGK 344
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA +VYH++KQ GQVLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 345 TVTSATVVYHLSKQNLGQVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDSPVSF 404
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH QVR++D EL KLQQLKDE GELSS+DEK+Y++LKR ERE+ Q+ADV+CCT
Sbjct: 405 LALHNQVRNMDAI--PELQKLQQLKDETGELSSADEKRYRSLKRNCERELLQNADVLCCT 462
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA FRFR +LIDESTQATEPEC+IP VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 463 CVGAGDPRLARFRFRSILIDESTQATEPECMIPAVLGAKQLILVGDHCQLGPVVMCKKAA 522
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++PIRLQVQYRMHP LS FPSN FYEG+LQNGVT ER + +D
Sbjct: 523 RAGLSQSLFERLVVLGIRPIRLQVQYRMHPILSSFPSNIFYEGSLQNGVTPGERSNKSLD 582
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP ++PM FY GQEEI++SGTSYLNRTEAANVEKI T FLR G+ P QIG+ITPY
Sbjct: 583 FPWPQTDKPMLFYATTGQEEIASSGTSYLNRTEAANVEKITTRFLRCGIRPEQIGIITPY 642
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR++IV YM NG+L +LY+EIE+ASVD+FQGREKDYIILSCVR+NEHQGIGFLNDP
Sbjct: 643 EGQRSFIVQYMQHNGSLHAKLYQEIEIASVDAFQGREKDYIILSCVRANEHQGIGFLNDP 702
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTR ++GI+I+GNPKVLSKQ LWN LL HYKE + LVEGPLNNLK+SM+QF KP
Sbjct: 703 RRLNVALTRCKFGIIIVGNPKVLSKQALWNHLLNHYKEQKVLVEGPLNNLKESMIQFSKP 762
Query: 839 KKIYNDRR--------LFFGAGPGIVPNDISTSNPNADRRGSRARG---------YMPPG 881
+K+ N F A ++P I DR G A G Y
Sbjct: 763 RKLINTTNPGGRFMSTAMFDAREAMIPGSI------YDRSGGMAGGSNHTNYDKYYHTHD 816
Query: 882 PPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGS--- 938
+ H AG +P +P+ F + H+PPP S
Sbjct: 817 QMGFINSERAHAAGANLP-IPVNMF-----------------------MPHMPPPHSYYN 852
Query: 939 -----RGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQ 993
R GRG Q+ N+Q + +T SQP GPLTQ
Sbjct: 853 QVPPGRPPPKGRGHGRRGGHHRGQNHYNSQN--ASQFTTGGPSQASQDTSQPFSQGPLTQ 910
Query: 994 PGFVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQGSHV 1034
+ P+ P + + G S +SQD +LGDDFKSQ V
Sbjct: 911 ANMSMSQPLSQPGLS-QPGLSQPELSQDSYLGDDFKSQADVV 951
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 74/105 (70%), Gaps = 13/105 (12%)
Query: 179 HIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCL 238
HIVNHLVRAK KEV LHKD PLGETILECYNCGCRNVFLLGFI AK +SVVVLLCR+PC
Sbjct: 1 HIVNHLVRAKCKEVTLHKDGPLGETILECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCA 60
Query: 239 NMMKESQSKDNVTIRWD------IGLNKKRVAYFV-FPKEDNELR 276
+S KD + WD + +++ +++ V P E +LR
Sbjct: 61 T---QSSLKD---MNWDPTQWQPLIHDRQFLSWLVKVPSEHEQLR 99
>gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]
Length = 1113
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/809 (59%), Positives = 595/809 (73%), Gaps = 57/809 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+A+F PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 315 LKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 373
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFD+MQ A+KTFAV+ETSVS
Sbjct: 374 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDKMQSALKTFAVEETSVS 433
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE ++ LP+RF A GLP+LN SQV+AVK+VLQRP+S IQGPPGTGK
Sbjct: 434 GYIYHKLLGHEVEDVFIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSFIQGPPGTGK 493
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 494 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 553
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 554 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 611
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 612 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 671
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 672 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 731
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 732 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 791
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 792 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 851
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL++YKE + LVEGPLNNL++S++QF KP
Sbjct: 852 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNNLRESLMQFSKP 911
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKP- 889
+K+ N + A I+P + R S+ R P TH
Sbjct: 912 RKLVNTVNPGARFMTTAMYDAREAIIPGSVYD-------RSSQGR---PSNMYFQTHDQI 961
Query: 890 ---GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFG 942
P+ +P+P PP +PPPG + G
Sbjct: 962 SMISAGPSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPA 1000
Query: 943 AGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPV 1002
AGRG+ G + + P + + N + ++ SQP G LTQ G+V+ +
Sbjct: 1001 AGRGTPKTKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGALTQ-GYVS---M 1056
Query: 1003 QGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1057 SQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1085
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 80 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 132
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 133 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 190
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 191 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 220
>gi|17380291|sp|Q92900.2|RENT1_HUMAN RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName: Full=Nonsense
mRNA reducing factor 1; Short=NORF1; AltName:
Full=Up-frameshift suppressor 1 homolog; Short=hUpf1
gi|119605144|gb|EAW84738.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_a
[Homo sapiens]
gi|119605147|gb|EAW84741.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_a
[Homo sapiens]
Length = 1129
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/816 (58%), Positives = 596/816 (73%), Gaps = 60/816 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYSG 289
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+ ++RL+ GDE+ LRY G
Sbjct: 320 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKG 379
Query: 290 DAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
D A P W+ +GHVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+
Sbjct: 380 DLA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSAL 438
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+
Sbjct: 439 KTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 498
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAK
Sbjct: 499 SLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 558
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREA+ SPV L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE
Sbjct: 559 SREAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERE 616
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQ
Sbjct: 617 LLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 676
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV
Sbjct: 677 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 736
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 737 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGA 796
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+N
Sbjct: 797 KPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN 856
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNN
Sbjct: 857 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNN 916
Query: 828 LKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP 879
L++S++QF KP+K+ N + A I+P + + +G + Y
Sbjct: 917 LRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQ 972
Query: 880 PGPPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG-- 937
G G P+ +P+P PP +PPPG
Sbjct: 973 THDQIGMISAG--PSHVAAMNIPIPFNLVMPP---------------------MPPPGYF 1009
Query: 938 --SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPG 995
+ G AGRG+ G + + P + + N + ++ SQP G LTQ G
Sbjct: 1010 GQANGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-G 1068
Query: 996 FVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+++ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1069 YIS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1101
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 85 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 137
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 138 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 195
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 196 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 225
>gi|168274489|dbj|BAG09664.1| regulator of nonsense transcripts 1 [synthetic construct]
Length = 1129
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/816 (58%), Positives = 596/816 (73%), Gaps = 60/816 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYSG 289
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+ ++RL+ GDE+ LRY G
Sbjct: 320 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKG 379
Query: 290 DAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
D A P W+ +GHVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+
Sbjct: 380 DLA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSAL 438
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+
Sbjct: 439 KTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 498
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAK
Sbjct: 499 SLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 558
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREA+ SPV L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE
Sbjct: 559 SREAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERE 616
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQ
Sbjct: 617 LLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 676
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV
Sbjct: 677 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 736
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 737 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGA 796
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+N
Sbjct: 797 KPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN 856
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNN
Sbjct: 857 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNN 916
Query: 828 LKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP 879
L++S++QF KP+K+ N + A I+P + + +G + Y
Sbjct: 917 LRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQ 972
Query: 880 PGPPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG-- 937
G G P+ +P+P PP +PPPG
Sbjct: 973 THDQIGMISAG--PSHVAAMNIPIPFNLVMPP---------------------MPPPGYF 1009
Query: 938 --SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPG 995
+ G AGRG+ G + + P + + N + ++ SQP G LTQ G
Sbjct: 1010 GQANGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-G 1068
Query: 996 FVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+++ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1069 YIS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1101
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 85 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 137
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 138 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 195
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 196 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 225
>gi|348523131|ref|XP_003449077.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1101
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/807 (60%), Positives = 602/807 (74%), Gaps = 51/807 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-ELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+ ++RL+ GDE+ LRY GD A P W+ +
Sbjct: 301 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGDMRLMQGDEICLRYKGDLA-PLWKGI 359
Query: 300 GHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +E+A+ELR+S G PV+I H F VDFVWKSTSFDRMQ A+KTFAVDETSV
Sbjct: 360 GHVIKVPDNYGDEIAIELRSSVGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSV 419
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGHEVE ++ LP+RF APGLP+LN SQV+AVK+VLQRP+SLIQGPPGTG
Sbjct: 420 SGYIYHKLLGHEVEDVTIKCQLPKRFTAPGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTG 479
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+++QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 480 KTVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVS 539
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
L LH Q+ ++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICC
Sbjct: 540 FLALHNQISNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICC 597
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKA
Sbjct: 598 TCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKA 657
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
A+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G
Sbjct: 658 AKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGF 717
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITP
Sbjct: 718 DFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITP 777
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+Y+V YM +G+L +LY+++E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLND
Sbjct: 778 YEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLND 837
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRA+YG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF K
Sbjct: 838 PRRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSK 897
Query: 838 PKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGS--------RARGYMPPGPPNGTH-K 888
P+K+ N I P S D R + R+ G P TH +
Sbjct: 898 PRKLVNT----------INPGGRFMSTAMYDAREALIPGSAYDRSNGGRPSNMYFQTHDQ 947
Query: 889 PGLHPAG-FPMPRVPLP-PFQGGPPSQPYAIPSR-GAVHGPVGAVHHVPPPGSRGFGAGR 945
G+ AG PM + +P PF P P A PS G +GP AGR
Sbjct: 948 IGMIGAGPGPMAAMNIPIPFNLVMP--PMAPPSYLGQTNGP---------------AAGR 990
Query: 946 GS-AGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQG 1004
G+ G P Q + + + G+ N + ++ SQ GPLTQ G+++ +
Sbjct: 991 GAMKGKPGRGGRQRLRGSAHQGASQGNGPNSQASQDGASQSFSQGPLTQ-GYIS---MSQ 1046
Query: 1005 PSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1047 PSQMSQPGLSQPELSQDSYLGDEFKSQ 1073
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 108/152 (71%), Gaps = 12/152 (7%)
Query: 104 NNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPS 163
N + S ++ + +A L+FEE +D Y D HAC YCG+ +PACVV CN +
Sbjct: 67 NGGVDDSVAKASQLLAELNFEEDEEDT----YYTKDLPLHACSYCGIHDPACVVYCN--T 120
Query: 164 CRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA 223
+KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLGFI A
Sbjct: 121 SKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPA 180
Query: 224 KTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
K +SVVVLLCR+PC + +S KD I WD
Sbjct: 181 KADSVVVLLCRQPCAS---QSSLKD---INWD 206
>gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stability [Homo sapiens]
Length = 1118
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/805 (59%), Positives = 592/805 (73%), Gaps = 49/805 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 320 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 378
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 379 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 438
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A LP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 439 GYIYHKLLGHEVEDVIIKCQLPKRFTAQALPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 498
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+Q G VLVCAPSN+AVDQL EKI TGLKVVRLC KSREA+ SPV
Sbjct: 499 TVTSATIVYHLARQDNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCPKSREAIDSPVSF 558
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 559 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 616
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 617 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 676
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 677 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 736
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 737 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 796
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 797 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 856
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL YKE + LVEGPLNNL++S++QF KP
Sbjct: 857 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLIFYKEQKVLVEGPLNNLRESLMQFSKP 916
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 917 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG 972
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 973 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1009
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G + + P + + N + ++ SQP G LTQ G+++ + PS
Sbjct: 1010 TPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPS 1065
Query: 1007 QTFRDGFSVGSMSQD-FLGDDFKSQ 1030
Q + G S +SQD +LGD+FKSQ
Sbjct: 1066 QMSQPGLSQPELSQDSYLGDEFKSQ 1090
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 85 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 137
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 138 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 195
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 196 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 225
>gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1123
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/815 (59%), Positives = 596/815 (73%), Gaps = 53/815 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 299 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PPWKGIG 357
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G P++I H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 358 HVIKVPDNYGDEIAIELRSSAGAPIEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 417
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 418 GYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 477
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 478 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 537
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q R++++ EL KLQQLKDE GELSSSDEK+Y+AL+R ERE+ +ADVICCT
Sbjct: 538 LALHNQTRNMES--MPELQKLQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCT 595
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 596 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPAVLGAKQLILVGDHCQLGPVVMCKKAA 655
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 656 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTSADRVKKGFD 715
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 716 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPY 775
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 776 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 835
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 836 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 895
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPP 880
+K+ N + A ++P + + N D+ G G P
Sbjct: 896 RKLVNTINPGGRFMSTAMYDAREALIPGSVYDRSNNGRTSNMYFQTHDQIGMIGTG---P 952
Query: 881 GPPNGTHKPGLHPAGFPMPRVPLPPFQG---GPPS-QPYAIPSRGAVHGPVGAVHHVPPP 936
P + P P MP +P P + G GP S + I + GA
Sbjct: 953 SPLTSLNLP--IPFNLMMPPIPPPGYLGQVNGPASGRSGGIKGKAGSGAGGGARGGRQRT 1010
Query: 937 GSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGF 996
S G+ G+ G H+ Q +Q + SQP GPLTQ G+
Sbjct: 1011 RSNMGNQCGGTLGSERGGHMGISQASQ----------------DLGSQPFSQGPLTQ-GY 1053
Query: 997 VNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+N + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1054 IN---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1085
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 102/138 (73%), Gaps = 12/138 (8%)
Query: 118 MAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
+A L+FEE +D Y D HAC YCG+ +PACVV CN + +KWFCN RGNTSG
Sbjct: 79 LAELNFEEDEEDT----YYTKDLPAHACSYCGIHDPACVVYCN--TSKKWFCNGRGNTSG 132
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
SHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLGFI AK +SVVVLLCR+PC
Sbjct: 133 SHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 192
Query: 238 LNMMKESQSKDNVTIRWD 255
+ +S KD I WD
Sbjct: 193 AS---QSSLKD---INWD 204
>gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]
Length = 1151
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/816 (58%), Positives = 596/816 (73%), Gaps = 60/816 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYSG 289
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+ ++RL+ GDE+ LRY G
Sbjct: 342 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKG 401
Query: 290 DAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
D A P W+ +GHVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+
Sbjct: 402 DLA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSAL 460
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+
Sbjct: 461 KTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 520
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAK
Sbjct: 521 SLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 580
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREA+ SPV L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE
Sbjct: 581 SREAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERE 638
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQ
Sbjct: 639 LLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 698
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV
Sbjct: 699 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 758
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 759 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGA 818
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+N
Sbjct: 819 KPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN 878
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNN
Sbjct: 879 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNN 938
Query: 828 LKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP 879
L++S++QF KP+K+ N + A I+P + + +G + Y
Sbjct: 939 LRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQ 994
Query: 880 PGPPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG-- 937
G G P+ +P+P PP +PPPG
Sbjct: 995 THDQIGMISAG--PSHVAAMNIPIPFNLVMPP---------------------MPPPGYF 1031
Query: 938 --SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPG 995
+ G AGRG+ G + + P + + N + ++ SQP G LTQ G
Sbjct: 1032 GQANGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-G 1090
Query: 996 FVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+++ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1091 YIS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1123
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 107 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 159
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 160 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 217
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 218 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 247
>gi|392333562|ref|XP_003752928.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2 [Rattus
norvegicus]
gi|392353859|ref|XP_003751614.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1 [Rattus
norvegicus]
Length = 1124
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/820 (58%), Positives = 598/820 (72%), Gaps = 68/820 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYSG 289
+KESQ++DN+T+RWD+GLNKKR+A+F PK D+ ++RL+ GDE+ LRY G
Sbjct: 315 LKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKG 374
Query: 290 DAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
D A P W+ +GHVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+
Sbjct: 375 DLA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSAL 433
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+
Sbjct: 434 KTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 493
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAK
Sbjct: 494 SLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 553
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREA+ SPV L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE
Sbjct: 554 SREAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERE 611
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQ
Sbjct: 612 LLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 671
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV
Sbjct: 672 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 731
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 732 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGA 791
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+N
Sbjct: 792 KPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN 851
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL++YKE + LVEGPLNN
Sbjct: 852 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNN 911
Query: 828 LKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP 879
L++S++QF KP+K+ N + A I+P + R S+ R P
Sbjct: 912 LRESLMQFSKPRKLVNTVNPGARFMTTAMYDAREAIIPGSVYD-------RSSQGR---P 961
Query: 880 PGPPNGTHKP----GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPP 935
TH P+ +P+P PP +PP
Sbjct: 962 SNMYFQTHDQISMISAGPSHVAAMNIPIPFNLVMPP---------------------MPP 1000
Query: 936 PG----SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPL 991
PG + G AGRG+ + G + + P + + N + ++ SQP G L
Sbjct: 1001 PGYFGQANGPAAGRGTPKSKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGAL 1060
Query: 992 TQPGFVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
TQ G+V+ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1061 TQ-GYVS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1096
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 80 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 132
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 133 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 190
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 191 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 220
>gi|170784813|ref|NP_001116301.1| regulator of nonsense transcripts 1 isoform a [Mus musculus]
gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName: Full=Nonsense
mRNA reducing factor 1; Short=NORF1; AltName:
Full=Up-frameshift suppressor 1 homolog; Short=mUpf1
gi|33989570|gb|AAH56442.1| Upf1 protein [Mus musculus]
Length = 1124
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/820 (58%), Positives = 597/820 (72%), Gaps = 68/820 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYSG 289
+KESQ++DN+T+RWD+GLNKKR+A+F PK D+ ++RL+ GDE+ LRY G
Sbjct: 315 LKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKG 374
Query: 290 DAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
D A P W+ +GHVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+
Sbjct: 375 DLA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSAL 433
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+
Sbjct: 434 KTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 493
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAK
Sbjct: 494 SLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 553
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREA+ SPV L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE
Sbjct: 554 SREAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERE 611
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQ
Sbjct: 612 LLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 671
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV
Sbjct: 672 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 731
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 732 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGA 791
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+N
Sbjct: 792 KPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN 851
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL++YKE + LVEGPLNN
Sbjct: 852 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNN 911
Query: 828 LKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP 879
L++S++QF KP+K+ N + A I+P + R S+ R P
Sbjct: 912 LRESLMQFSKPRKLVNTVNPGARFMTTAMYDAREAIIPGSVYD-------RSSQGR---P 961
Query: 880 PGPPNGTHKP----GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPP 935
TH P+ +P+P PP +PP
Sbjct: 962 SNMYFQTHDQISMISAGPSHVAAMNIPIPFNLVMPP---------------------MPP 1000
Query: 936 PG----SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPL 991
PG + G AGRG+ G + + P + + N + ++ SQP G L
Sbjct: 1001 PGYFGQANGPAAGRGTPKTKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGAL 1060
Query: 992 TQPGFVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
TQ G+V+ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1061 TQ-GYVS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1096
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 80 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 132
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 133 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 190
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 191 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 220
>gi|355703337|gb|EHH29828.1| hypothetical protein EGK_10343, partial [Macaca mulatta]
Length = 1053
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/816 (58%), Positives = 596/816 (73%), Gaps = 60/816 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYSG 289
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+ ++RL+ GDE+ LRY G
Sbjct: 244 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKG 303
Query: 290 DAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
D A P W+ +GHVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+
Sbjct: 304 DLA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSAL 362
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+
Sbjct: 363 KTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 422
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAK
Sbjct: 423 SLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 482
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREA+ SPV L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE
Sbjct: 483 SREAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERE 540
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQ
Sbjct: 541 LLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 600
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV
Sbjct: 601 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 660
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 661 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGA 720
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+N
Sbjct: 721 KPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN 780
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNN
Sbjct: 781 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNN 840
Query: 828 LKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP 879
L++S++QF KP+K+ N + A I+P + + +G + Y
Sbjct: 841 LRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQ 896
Query: 880 PGPPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG-- 937
G G P+ +P+P PP +PPPG
Sbjct: 897 THDQIGMISAG--PSHVAAMNIPIPFNLVMPP---------------------MPPPGYF 933
Query: 938 --SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPG 995
+ G AGRG+ G + + P + + N + ++ SQP G LTQ G
Sbjct: 934 GQANGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-G 992
Query: 996 FVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+++ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 993 YIS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1025
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 9 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 61
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 62 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 119
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 120 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 149
>gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1 [Danio rerio]
gi|28278858|gb|AAH45353.1| Upf1 regulator of nonsense transcripts homolog (yeast) [Danio rerio]
gi|240248221|emb|CAX18770.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Danio rerio]
Length = 1100
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/811 (60%), Positives = 599/811 (73%), Gaps = 58/811 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-ELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+ ++RL+ GDE+ LRY GD A P W+ +
Sbjct: 299 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGDMRLMQGDEICLRYKGDMA-PLWKGI 357
Query: 300 GHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSV
Sbjct: 358 GHVIKVPDNYGDEIAIELRSSAGAPVEVPHNFQVDFVWKSTSFDRMQSALKTFAVDETSV 417
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTG
Sbjct: 418 SGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTG 477
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 478 KTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVS 537
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
L LH Q+R++D+ EL KLQQLKDE GELSSSDEK+Y+ALKR ERE+ +ADVICC
Sbjct: 538 FLALHNQIRNMDS--MPELQKLQQLKDETGELSSSDEKRYRALKRTAERELLMNADVICC 595
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKA
Sbjct: 596 TCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKA 655
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
A+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G
Sbjct: 656 AKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGF 715
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITP
Sbjct: 716 DFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITP 775
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLND
Sbjct: 776 YEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLND 835
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF K
Sbjct: 836 PRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSK 895
Query: 838 PKKIYND--------RRLFFGAGPGIVPNDI----STSNP-NADRRGSRARGYMPPGP-P 883
P+K+ N + A ++P + ST P N + G + GP P
Sbjct: 896 PRKLVNTINPGARFMSTAMYDAREAMIPGSVYDRSSTGRPSNMYFQTHDQVGMIGTGPNP 955
Query: 884 NGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGA 943
G+ + P MP +P P + G V+GP A
Sbjct: 956 MGSLNIPI-PFNLVMPPMPPPGY-------------LGQVNGP---------------AA 986
Query: 944 GRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSN---SQPSVGGPLTQPGFVNNM 1000
GRG+ G Q+N G N P+ + S SQP GPLTQ G++
Sbjct: 987 GRGAPKGKTGGRGGRQRNRGTGNHGSGQP-NMPNSQASQDLVSQPFSQGPLTQ-GYIT-- 1042
Query: 1001 PVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+ PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1043 -MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1072
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 105/145 (72%), Gaps = 15/145 (10%)
Query: 111 TSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCN 170
TSQ+ +A L+FEE +D Y HAC YCG+ +PACVV CN + +KWFCN
Sbjct: 75 TSQL---LAELNFEEDEEDT----YYTKVLPVHACSYCGIHDPACVVYCN--TSKKWFCN 125
Query: 171 SRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVV 230
RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLGFI AK +SVVV
Sbjct: 126 GRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVV 185
Query: 231 LLCREPCLNMMKESQSKDNVTIRWD 255
LLCR+PC + +S KD I WD
Sbjct: 186 LLCRQPCAS---QSSLKD---INWD 204
>gi|74201543|dbj|BAE28409.1| unnamed protein product [Mus musculus]
Length = 1124
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/820 (58%), Positives = 597/820 (72%), Gaps = 68/820 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYSG 289
+KESQ++DN+T+RWD+GLNKKR+A+F PK D+ ++RL+ GDE+ LRY G
Sbjct: 315 LKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKG 374
Query: 290 DAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
D A P W+ +GHVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+
Sbjct: 375 DLA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSAL 433
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+
Sbjct: 434 KTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 493
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAK
Sbjct: 494 SLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 553
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREA+ SPV L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE
Sbjct: 554 SREAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERE 611
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQ
Sbjct: 612 LLMNADVICCTCVGAGDPRLAEMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 671
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV
Sbjct: 672 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 731
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 732 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGA 791
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+N
Sbjct: 792 KPDQIGIITPYEGQRSYLVQYMQFSGSLYTKLYQEVEIASVDAFQGREKDFIILSCVRAN 851
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL++YKE + LVEGPLNN
Sbjct: 852 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNN 911
Query: 828 LKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP 879
L++S++QF KP+K+ N + A I+P + R S+ R P
Sbjct: 912 LRESLMQFSKPRKLVNTVNPGARFMTTAMYDAREAIIPGSVYD-------RSSQGR---P 961
Query: 880 PGPPNGTHKP----GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPP 935
TH P+ +P+P PP +PP
Sbjct: 962 SNMYFQTHDQISMISAGPSHVAAMNIPIPFNLVMPP---------------------MPP 1000
Query: 936 PG----SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPL 991
PG + G AGRG+ G + + P + + N + ++ SQP G L
Sbjct: 1001 PGYFGQANGPAAGRGTPKTKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGAL 1060
Query: 992 TQPGFVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
TQ G+V+ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1061 TQ-GYVS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1096
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 80 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 132
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 133 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 190
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 191 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 220
>gi|348500490|ref|XP_003437806.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1109
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/816 (59%), Positives = 594/816 (72%), Gaps = 58/816 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 299 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PPWKGIG 357
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV+I H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 358 HVIKVPDNYGDEIAIELRSSAGAPVEIPHIFQVDFVWKSTSFDRMQSALKTFAVDETSVS 417
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 418 GYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 477
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 478 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 537
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q R++D+ EL KLQQLKDE GELSSSDEK+Y+AL+R ERE+ +ADVICCT
Sbjct: 538 LALHNQTRNMDS--MPELQKLQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCT 595
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 596 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 655
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 656 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 715
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 716 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPY 775
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 776 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 835
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 836 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 895
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPP 880
+K+ N + A ++P + + N D+ G G P
Sbjct: 896 RKLVNTINPGGRFMSTAMYDAREALIPGSVYDRSSNGRSSNMYFQTHDQIGMIGTG---P 952
Query: 881 GPPNGTHKPGLHPAGFPMPRVPLPPFQG---GPPSQPYAIPSRGAVHGPVGAVHHVPPPG 937
P + + P P MP +P P + G GP + + G G
Sbjct: 953 SPMSSMNIP--IPFNLVMPPIPPPGYLGQVNGPTAGRGGGLKGKSGSGGGGGTRGGRQRN 1010
Query: 938 SRGFGAG--RGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPG 995
G RG G Q T Q + ++ SQP GPLTQ G
Sbjct: 1011 RGNHSGGTDRGQHGG--------QMTTSQ------------TSQDQGSQPFSQGPLTQ-G 1049
Query: 996 FVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+++ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1050 YIS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1082
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 102/138 (73%), Gaps = 12/138 (8%)
Query: 118 MAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
+A L+FEE +D Y D HAC YCG+ +PACVV CN + +KWFCN RGNTSG
Sbjct: 79 LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYCN--TSKKWFCNGRGNTSG 132
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
SHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLGFI AK +SVVVLLCR+PC
Sbjct: 133 SHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 192
Query: 238 LNMMKESQSKDNVTIRWD 255
+ +S KD I WD
Sbjct: 193 AS---QSSLKD---INWD 204
>gi|148696866|gb|EDL28813.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_a
[Mus musculus]
Length = 1131
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/820 (58%), Positives = 597/820 (72%), Gaps = 68/820 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYSG 289
+KESQ++DN+T+RWD+GLNKKR+A+F PK D+ ++RL+ GDE+ LRY G
Sbjct: 322 LKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKG 381
Query: 290 DAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
D A P W+ +GHVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+
Sbjct: 382 DLA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSAL 440
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+
Sbjct: 441 KTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 500
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAK
Sbjct: 501 SLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 560
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREA+ SPV L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE
Sbjct: 561 SREAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERE 618
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQ
Sbjct: 619 LLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 678
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV
Sbjct: 679 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 738
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 739 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGA 798
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+N
Sbjct: 799 KPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN 858
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL++YKE + LVEGPLNN
Sbjct: 859 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNN 918
Query: 828 LKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP 879
L++S++QF KP+K+ N + A I+P + R S+ R P
Sbjct: 919 LRESLMQFSKPRKLVNTVNPGARFMTTAMYDAREAIIPGSVYD-------RSSQGR---P 968
Query: 880 PGPPNGTHKP----GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPP 935
TH P+ +P+P PP +PP
Sbjct: 969 SNMYFQTHDQISMISAGPSHVAAMNIPIPFNLVMPP---------------------MPP 1007
Query: 936 PG----SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPL 991
PG + G AGRG+ G + + P + + N + ++ SQP G L
Sbjct: 1008 PGYFGQANGPAAGRGTPKTKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGAL 1067
Query: 992 TQPGFVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
TQ G+V+ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1068 TQ-GYVS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1103
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 87 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 139
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 140 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 197
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 198 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 227
>gi|410921828|ref|XP_003974385.1| PREDICTED: regulator of nonsense transcripts 1-like [Takifugu
rubripes]
Length = 1099
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/810 (59%), Positives = 594/810 (73%), Gaps = 59/810 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 301 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 359
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR S G PV+I H + VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 360 HVIKVPDNYGDEIAIELRTSVGAPVEIPHNYQVDFVWKSTSFDRMQSALKTFAVDETSVS 419
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE ++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 420 GYIYHKLLGHEVEDVTIKCQLPKRFTANGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 479
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+++QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 480 TVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSF 539
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+ ++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 540 LALHNQISNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 597
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 598 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 657
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 658 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFD 717
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P +PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 718 FQWPQPEKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPY 777
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+++E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 778 EGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 837
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 838 RRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKP 897
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGS---RARGYMPPGPPNGTH 887
+K+ N + A ++P + A R + + + +H
Sbjct: 898 RKLVNTINPGGRFMSTAMYDAREALIPGSAYDRSNTAGRPSNMYFQTHDQIGMIGAAASH 957
Query: 888 KPGLH---PAGFPMPRVPLPPFQG---GPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGF 941
L+ P MP +P P +QG GP + RGA+ G G GS
Sbjct: 958 LAALNIPIPFNLVMPPMPPPSYQGQTNGPAA------GRGAMKGKSGRGGRQRIRGSGNQ 1011
Query: 942 GAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMP 1001
G G H N+Q I G++ +F GPLTQ G+++
Sbjct: 1012 GVG-------------HMPNSQ--ISQDGASQSFSQ-----------GPLTQ-GYIS--- 1041
Query: 1002 VQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+ PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1042 MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1071
Score = 189 bits (481), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 114/181 (62%), Gaps = 15/181 (8%)
Query: 75 PASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFE 134
P+ H + + L G + S SQ+ +A L+FEE +D
Sbjct: 41 PSQTQTQGHTQSQLDNQLNGPDDGLHNGGMDDSVAKASQL---LAELNFEEDEEDT---- 93
Query: 135 YGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCL 194
Y D HAC YCG+ +PACVV CN + +KWFCN RGNTSGSHIVNHLVRAK KEV L
Sbjct: 94 YYTKDLPVHACSYCGIHDPACVVYCN--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTL 151
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
HKD PLGET+LECYNCGCRNVFLLGFI AK +SVVVLLCR+PC + +S KD I W
Sbjct: 152 HKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCAS---QSSLKD---INW 205
Query: 255 D 255
D
Sbjct: 206 D 206
>gi|410924489|ref|XP_003975714.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Takifugu rubripes]
Length = 1111
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/820 (59%), Positives = 591/820 (72%), Gaps = 62/820 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 297 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PPWKGIG 355
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV+I H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 356 HVIKVPDNYGDEIAIELRSSAGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 415
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 416 GYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 475
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 476 TVTSATIVYHLARQGSGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 535
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q R++++ EL KLQQLKDE GELSSSDEK+Y+AL+R ERE+ +ADVICCT
Sbjct: 536 LALHNQTRNMES--MPELQKLQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCT 593
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 594 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 653
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 654 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 713
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 714 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPY 773
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 774 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 833
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 834 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 893
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPP 880
+K+ N + A ++P + + N D+ G G P
Sbjct: 894 RKLVNTINPGGRFMSTAMYDAREALIPGSVYDRSNNGRTTNMYFQTHDQIGMIGTG---P 950
Query: 881 GPPNGTHKPGLHPAGFPMPRVPLPPFQG---GPPS------QPYAIPSRGAVHGPVGAVH 931
P + P P MP +P P + G GP S + A G +
Sbjct: 951 NPITAMNLP--IPFNLVMPPIPPPGYLGQINGPASGRGGGMKGKAATGAGGGSRGGRQRN 1008
Query: 932 HVPPPGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPL 991
G+ RG G +G Q QP GPL
Sbjct: 1009 RGNMGSGGNSGSDRGLHGGHMGVSQASQDLGSQPFSQ--------------------GPL 1048
Query: 992 TQPGFVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
TQ G++N + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1049 TQ-GYIN---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1084
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 102/138 (73%), Gaps = 12/138 (8%)
Query: 118 MAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
+A L+FEE +D Y D HAC YCG+ +PACVV CN + +KWFCN RGNTSG
Sbjct: 77 LAELNFEEDEEDA----YYTKDLPAHACSYCGIHDPACVVYCN--TSKKWFCNGRGNTSG 130
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
SHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLGFI AK +SVVVLLCR+PC
Sbjct: 131 SHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 190
Query: 238 LNMMKESQSKDNVTIRWD 255
+ +S KD I WD
Sbjct: 191 AS---QSSLKD---INWD 202
>gi|326934529|ref|XP_003213341.1| PREDICTED: regulator of nonsense transcripts 1-like [Meleagris
gallopavo]
Length = 1059
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/808 (59%), Positives = 593/808 (73%), Gaps = 57/808 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 263 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 321
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 322 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 381
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 382 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 441
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 442 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 501
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 502 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 559
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 560 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 619
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+L LQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 620 KAGLSQSLFERLVVLPWGC--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 677
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 678 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 737
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 738 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 797
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 798 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 857
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 858 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 913
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 914 --PSHVTAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 950
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSN---SQPSVGGPLTQPGFVNNMPVQ 1003
+ G + + P GT S N P+ + S SQP GPLTQ G+++ +
Sbjct: 951 APKGKTGRGGRQKNRFGIP-GT--SQSNLPNSQASQDVVSQPFSQGPLTQ-GYIS---MS 1003
Query: 1004 GPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1004 QPSQMSQPGLSQPELSQDSYLGDEFKSQ 1031
Score = 189 bits (480), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + + TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 28 QNGAVDDNVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 80
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 81 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 138
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 139 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 168
>gi|432854578|ref|XP_004067970.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Oryzias latipes]
Length = 1093
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/800 (60%), Positives = 587/800 (73%), Gaps = 51/800 (6%)
Query: 248 DNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTA 307
DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +GHVIK+
Sbjct: 300 DNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIGHVIKVPD 358
Query: 308 Q--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHL 365
+E+A+ELR+S G PV+I H F VDFVWKSTSFDRMQ A+KTFAVDETSVSGYIYH L
Sbjct: 359 NYGDEIAIELRSSVGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKL 418
Query: 366 LGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAI 425
LGHEVE ++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGKTVTSA I
Sbjct: 419 LGHEVEDVTIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATI 478
Query: 426 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV 485
VYH+++QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV L LH Q+
Sbjct: 479 VYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSFLALHNQI 538
Query: 486 RHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDP 545
++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCTCVGAGDP
Sbjct: 539 SNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDP 596
Query: 546 RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQS 605
RLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA+AGL+QS
Sbjct: 597 RLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQS 656
Query: 606 LFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
LFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G DF WP P+
Sbjct: 657 LFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQWPQPD 716
Query: 666 RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYI 725
+PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPYEGQR+Y+
Sbjct: 717 KPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYL 776
Query: 726 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
V YM +G+L +LY+++E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDPRRLNVAL
Sbjct: 777 VQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVAL 836
Query: 786 TRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYND- 844
TRA+YG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP+K+ N
Sbjct: 837 TRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTI 896
Query: 845 -------RRLFFGAGPGIVPNDISTSNPNADR------RGSRARGYMPPGPPNGTHKPGL 891
+ A ++P + A R + G + GP +
Sbjct: 897 NPGARFMSTAMYDAREALIPGSAYDRSSTAGRPSNMYFQTHDQIGMIGAGPGHMAAMNIP 956
Query: 892 HPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAP 951
P MP +P PP G + P A RGA+ G PG G RG
Sbjct: 957 IPFNLVMPPMP-PPSYLGQANGPAA--GRGAMKG---------KPGRSGRQRVRG----- 999
Query: 952 IGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRD 1011
IG+ Q N N ++ SQ GPLTQ G+++ + PSQ +
Sbjct: 1000 IGNQGPGQVNGP----------NSQVSQDGASQSFSQGPLTQ-GYIS---ISQPSQMSQP 1045
Query: 1012 GFSVGSMSQD-FLGDDFKSQ 1030
G S +SQD +LGD+FKSQ
Sbjct: 1046 GLSQPELSQDSYLGDEFKSQ 1065
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 110/161 (68%), Gaps = 12/161 (7%)
Query: 95 TSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPA 154
+ P + N + S ++ + + L+FEE +D Y D HAC YCG+ +PA
Sbjct: 58 VNGPDEGLLNGGLDDSVAKTSQFLGELNFEEDEEDA----YYTKDLPVHACSYCGIHDPA 113
Query: 155 CVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRN 214
CVV CN + +KWFCN RGNTSGSHIVNH+VRAK KEV LHKD PLGET+LECYNCGCRN
Sbjct: 114 CVVYCN--TSKKWFCNGRGNTSGSHIVNHMVRAKCKEVTLHKDGPLGETVLECYNCGCRN 171
Query: 215 VFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
VFLLGFI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 172 VFLLGFIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 206
>gi|426230268|ref|XP_004009198.1| PREDICTED: regulator of nonsense transcripts 1 [Ovis aries]
Length = 1341
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/797 (59%), Positives = 586/797 (73%), Gaps = 54/797 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 509 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 567
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 568 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 627
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 628 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 687
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSR+A+ SPV
Sbjct: 688 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSRKAIDSPVSF 747
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 748 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 805
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 806 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 865
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 866 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 925
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 926 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 985
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 986 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 1045
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 1046 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 1105
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
+K+ N + A I+P + + +G + Y G G
Sbjct: 1106 RKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQIGMISAG 1161
Query: 891 LHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRG 946
P+ +P+P PP +PPPG + G AGRG
Sbjct: 1162 --PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRG 1198
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIG-STFNFPSLENSNSQPSVG-GPLTQPGFVNNMPVQG 1004
+ G + + G G S N P+ + S S G LTQ G+++ +
Sbjct: 1199 TPKGKTGRGGRQKNR----FGLPGPSQTNLPNSQASQDVASFSQGALTQ-GYIS---MSQ 1250
Query: 1005 PSQTFRDGFSVGSMSQD 1021
PSQ + G S +SQ+
Sbjct: 1251 PSQMSQPGLSQPELSQE 1267
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 274 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 326
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 327 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 384
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 385 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 414
>gi|444726614|gb|ELW67138.1| Regulator of nonsense transcripts 1 [Tupaia chinensis]
Length = 1000
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/605 (71%), Positives = 521/605 (86%), Gaps = 5/605 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 278 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 336
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 337 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 396
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHE E +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 397 GYIYHKLLGHEGEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 456
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 457 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 516
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 517 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 574
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 575 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 634
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 635 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 694
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 695 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 754
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 755 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 814
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 815 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 874
Query: 839 KKIYN 843
+K+ N
Sbjct: 875 RKLVN 879
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/137 (64%), Positives = 101/137 (73%), Gaps = 9/137 (6%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 71 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 123
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 124 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 181
Query: 220 FISAKTESVVVLLCREP 236
FI AK +SVVVLLCR P
Sbjct: 182 FIPAKADSVVVLLCRPP 198
>gi|410924491|ref|XP_003975715.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Takifugu rubripes]
Length = 1122
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/831 (58%), Positives = 591/831 (71%), Gaps = 73/831 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYSG 289
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+ ++RL+ GDE+ LRY G
Sbjct: 297 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGTFYLIITIIPDMRLMQGDEICLRYKG 356
Query: 290 DAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
D A P W+ +GHVIK+ +E+A+ELR+S G PV+I H F VDFVWKSTSFDRMQ A+
Sbjct: 357 DLA-PPWKGIGHVIKVPDNYGDEIAIELRSSAGAPVEIPHNFQVDFVWKSTSFDRMQSAL 415
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+
Sbjct: 416 KTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 475
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAK
Sbjct: 476 SLIQGPPGTGKTVTSATIVYHLARQGSGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 535
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREA+ SPV L LH Q R++++ EL KLQQLKDE GELSSSDEK+Y+AL+R ERE
Sbjct: 536 SREAIDSPVSFLALHNQTRNMES--MPELQKLQQLKDETGELSSSDEKRYRALRRTAERE 593
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQ
Sbjct: 594 LLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 653
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGV
Sbjct: 654 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 713
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 714 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGA 773
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+N
Sbjct: 774 KPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN 833
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNN
Sbjct: 834 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNN 893
Query: 828 LKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNA----------DR 869
L++S++QF KP+K+ N + A ++P + + N D+
Sbjct: 894 LRESLMQFSKPRKLVNTINPGGRFMSTAMYDAREALIPGSVYDRSNNGRTTNMYFQTHDQ 953
Query: 870 RGSRARGYMPPGPPNGTHKPGLHPAGFPMPRVPLPPFQG---GPPS------QPYAIPSR 920
G G P P + P P MP +P P + G GP S + A
Sbjct: 954 IGMIGTG---PNPITAMNLP--IPFNLVMPPIPPPGYLGQINGPASGRGGGMKGKAATGA 1008
Query: 921 GAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLEN 980
G + G+ RG G +G Q QP
Sbjct: 1009 GGGSRGGRQRNRGNMGSGGNSGSDRGLHGGHMGVSQASQDLGSQPFSQ------------ 1056
Query: 981 SNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
GPLTQ G++N + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1057 --------GPLTQ-GYIN---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1095
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 102/138 (73%), Gaps = 12/138 (8%)
Query: 118 MAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
+A L+FEE +D Y D HAC YCG+ +PACVV CN + +KWFCN RGNTSG
Sbjct: 77 LAELNFEEDEEDA----YYTKDLPAHACSYCGIHDPACVVYCN--TSKKWFCNGRGNTSG 130
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
SHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLGFI AK +SVVVLLCR+PC
Sbjct: 131 SHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 190
Query: 238 LNMMKESQSKDNVTIRWD 255
+ +S KD I WD
Sbjct: 191 AS---QSSLKD---INWD 202
>gi|410053595|ref|XP_512972.4| PREDICTED: regulator of nonsense transcripts 1 [Pan troglodytes]
Length = 1057
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/733 (61%), Positives = 553/733 (75%), Gaps = 41/733 (5%)
Query: 244 SQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVI 303
+ ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +GHVI
Sbjct: 323 ADTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIGHVI 381
Query: 304 KLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYI 361
K+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVSGYI
Sbjct: 382 KVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYI 441
Query: 362 YHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVT 421
YH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGKTVT
Sbjct: 442 YHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVT 501
Query: 422 SAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTL 481
SA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV L L
Sbjct: 502 SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLAL 561
Query: 482 HYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVG 541
H Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCTCVG
Sbjct: 562 HNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVG 619
Query: 542 AGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
AGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA+AG
Sbjct: 620 AGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAG 679
Query: 602 LAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
L+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G DF W
Sbjct: 680 LSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW 739
Query: 662 PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQ 721
P P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPYEGQ
Sbjct: 740 PQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQ 799
Query: 722 RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
R+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDPRRL
Sbjct: 800 RSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRL 859
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKI 841
NVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP+K+
Sbjct: 860 NVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKL 919
Query: 842 YND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARG----------------- 876
N + A I+P + + R +R RG
Sbjct: 920 VNTINPGARFMTTAMYDAREAIIPGSVYDRSSQG-RESARGRGAEAERPLLARGGEEQRE 978
Query: 877 --YMPPGPPNGTHKPGLHPAGF--------PMPRVPLPPFQGGPPSQPYAIPSRGAVHGP 926
P T +P P G P R+P+ F G PS A P
Sbjct: 979 RRRGRPAGAAATRRPRSVPPGLRPGRREEDPHLRLPVASFCGASGCWGSRPPSLEAARSP 1038
Query: 927 VGAVHHVPPPGSR 939
+ + + P +R
Sbjct: 1039 LDSEAKLLPAWTR 1051
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 85 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 137
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 138 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 195
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 196 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 225
>gi|327200471|pdb|2XZO|A Chain A, Upf1 Helicase - Rna Complex
gi|327200473|pdb|2XZP|A Chain A, Upf1 Helicase
Length = 623
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/597 (72%), Positives = 516/597 (86%), Gaps = 5/597 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 29 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 87
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 88 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 147
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 148 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 207
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 208 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 267
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 268 LALHNQIRNMDSM--PELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 325
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 326 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 385
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 386 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 445
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 446 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 505
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 506 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 565
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF
Sbjct: 566 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQF 622
>gi|126030570|pdb|2GJK|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030579|pdb|2GK6|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030580|pdb|2GK6|B Chain B, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030581|pdb|2GK7|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
Length = 624
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/597 (72%), Positives = 516/597 (86%), Gaps = 5/597 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 30 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 88
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 89 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 148
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 149 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 208
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 209 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 268
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 269 LALHNQIRNMDSM--PELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 326
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 327 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 386
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 387 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 446
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 447 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 506
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 507 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 566
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF
Sbjct: 567 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQF 623
>gi|169852646|ref|XP_001833005.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
gi|116505799|gb|EAU88694.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
Length = 1079
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/691 (67%), Positives = 538/691 (77%), Gaps = 25/691 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++ ++T+RWD+GLN+KRVA+F PK E E+RL GDELRLRY G+ H AW+ V
Sbjct: 292 LKESQTQTDITVRWDLGLNQKRVAWFCLPKLESGEVRLAVGDELRLRYQGEL-HKAWEGV 350
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +E+ LELR S GVP + H F+ DFVWKSTSFDRMQ AMKTFAVDE SV
Sbjct: 351 GHVIKIPNNVSDEIGLELRRSDGVPSECTHNFAADFVWKSTSFDRMQLAMKTFAVDEKSV 410
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGHEVE Q +R +P+RF APGLPELN SQ++AVKSVLQ+P+SLIQGPPGTG
Sbjct: 411 SGYIYHKLLGHEVEAQSLRTQMPKRFSAPGLPELNHSQMYAVKSVLQKPLSLIQGPPGTG 470
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA+IVYH+AK GQVLVCAPSNVAVDQL EKI ATGLKVVRL AKSREA+ S V
Sbjct: 471 KTVTSASIVYHLAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLTAKSREALDSSVN 530
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV +++ EL KL QLK+EQGELSS+DE+KYK L R E+EI +ADVICC
Sbjct: 531 FLTLHQQV--ANSTTHIELQKLIQLKNEQGELSSNDERKYKTLIRQCEKEILGAADVICC 588
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVGAGDPRL+ RFR VLIDE+TQA EPEC+IPLVLG KQVV+VGDH QLGPVIM KKA
Sbjct: 589 TCVGAGDPRLSKLRFRTVLIDEATQAAEPECMIPLVLGCKQVVMVGDHQQLGPVIMNKKA 648
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL QSLFERLVLLG +PIRLQVQYRMHP LSEFPSN FYEG+LQNGVT ER +
Sbjct: 649 ARAGLTQSLFERLVLLGNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERLRKNV 708
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPVP+ PMFFY +GQEEIS+SGTS+LNRTEA+NVEKIVT F +SGVVP+QIGV+TP
Sbjct: 709 DFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPNQIGVVTP 768
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVNYM NG+L++ LYKEIEVASVD+FQGREKDYIILSCVRSNEHQGIGFLND
Sbjct: 769 YEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLND 828
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRA+YG+VILGNPKVLSK PLW+ LLTHYKE LVEGPLNNL+ SM+QF K
Sbjct: 829 PRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKESNVLVEGPLNNLQPSMIQFSK 888
Query: 838 P-----KKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRAR------------GYMPP 880
P K + RR A + N +P + R G+ +R GY+ P
Sbjct: 889 PRRSLVKSMEQFRRHETVARDYLPSNSGMPVDPMSRRSGTPSRFDASFYRTHDAMGYI-P 947
Query: 881 GPPNGTHKPGLHPAGFPMPRVPLPPFQGGPP 911
+ +G PM P PF G P
Sbjct: 948 SDVQSLRSQATYSSGLPMFGAP-GPFSAGIP 977
Score = 169 bits (428), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 118/186 (63%), Gaps = 20/186 (10%)
Query: 97 SPSKRGANNSSNTSTSQIVEGMAGLS--FEETGDDVEGFEYGKADFTEHACRYCGVSNPA 154
+PS G ++ ++ S + GL F+ DD++ + + D HAC YCG+ +PA
Sbjct: 49 NPSSSGNGHAGHSHVSPKNQQGTGLDEDFDAVLDDLK--DEAEVDLPPHACSYCGIHSPA 106
Query: 155 CVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRN 214
VV+C + C KWFCNSRGNTS SHIVNHLVRAKHKEV LH +SPLGET ECYNCG +N
Sbjct: 107 SVVKCLI--CSKWFCNSRGNTSASHIVNHLVRAKHKEVILHAESPLGETTPECYNCGSKN 164
Query: 215 VFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGL------NKKRVAYFVF 268
VF+LGFI AK+++VVVLLCR+PC + K+ I W+ L ++ +++ V
Sbjct: 165 VFMLGFIPAKSDTVVVLLCRQPCAAISKD--------ISWNASLWAPLIDDRSFLSWLVK 216
Query: 269 PKEDNE 274
P + E
Sbjct: 217 PPSEQE 222
>gi|251836854|pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836855|pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836858|pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/597 (72%), Positives = 516/597 (86%), Gaps = 5/597 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 206 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 264
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 265 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 324
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 325 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 384
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 385 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 444
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 445 LALHNQIRNMDSM--PELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 502
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 503 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 562
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 563 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 622
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 623 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 682
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 683 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 742
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF
Sbjct: 743 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQF 799
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/117 (70%), Positives = 92/117 (78%), Gaps = 8/117 (6%)
Query: 139 DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDS 198
D HAC YCG+ +PACVV CN + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD
Sbjct: 3 DLPIHACSYCGIHDPACVVYCN--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 60
Query: 199 PLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
PLGET+LECYNCGCRNVFLLGFI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 61 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 111
>gi|427788499|gb|JAA59701.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1125
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/821 (59%), Positives = 578/821 (70%), Gaps = 38/821 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+ +RWDIGLNKK +AYF K D ++RL+ GDELRLRY G+ H W VG
Sbjct: 301 LKESQTQDNIEVRWDIGLNKKMIAYFTVAKSDTDMRLMHGDELRLRYLGEL-HKPWSGVG 359
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +E++ + GVP + F VDFVWKSTSFDRMQ A++ FAVDE SVS
Sbjct: 360 HVIKIPDNYSEEVGIEMKTNLGVPSECTSNFVVDFVWKSTSFDRMQAALRKFAVDECSVS 419
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE ++R LP+ F AP LPELN SQV+AVK LQRP+SLIQGPPGTGK
Sbjct: 420 AYIYHRLLGHEVEEVVMRCPLPKHFSAPQLPELNRSQVYAVKHALQRPLSLIQGPPGTGK 479
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA +VYH+AKQ G VLVCAPSN+AVDQL EK+ TGL+VVRLCAKSREA++SPV
Sbjct: 480 TVTSATVVYHLAKQSTGPVLVCAPSNIAVDQLTEKVHQTGLRVVRLCAKSREALNSPVSF 539
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R +D SELHKLQQLKDE GELSS+DEK+Y+ LK+A ERE+ ++ADVICCT
Sbjct: 540 LALHNQIRSMDG--HSELHKLQQLKDETGELSSADEKRYRMLKKACERELLEAADVICCT 597
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA F+F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 598 CVGAGDPRLARFKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 657
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P+RL+VQYRMHP L++FPSN FYEG+LQNGV +ER+ G+D
Sbjct: 658 RAGLSQSLFERLVVLGIRPLRLEVQYRMHPQLAQFPSNFFYEGSLQNGVFADERRMRGLD 717
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P RPM FY GQEE++ SGTSYLNRTEAA VEKI T FLRSGV P Q+GVITPY
Sbjct: 718 FPWPQPERPMLFYACQGQEEMAGSGTSYLNRTEAALVEKICTRFLRSGVKPQQVGVITPY 777
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V +M GAL +LY+EIEVASVD+FQGREKD I++SCVRSNEHQGIGFLNDP
Sbjct: 778 EGQRAYLVQHMQFQGALHSKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGFLNDP 837
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPKVLSKQPLWN LLT YKE+ LVEGPLNNLK+S++QF KP
Sbjct: 838 RRLNVALTRARYGLIIVGNPKVLSKQPLWNHLLTFYKENRVLVEGPLNNLKESLIQFSKP 897
Query: 839 KKIYND--------RRLFFGAGPGIVPNDI----STSNPNADRRGSRARGYMPPGPPNGT 886
+K+ N F A +VP + S N D RG+ RG P N T
Sbjct: 898 RKLVNTVNPGGHFMSTTVFDAREAMVPGSVYDRSSQLNGGPDWRGA-GRGAWAPLKENFT 956
Query: 887 HKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPP----PGSRGFG 942
GF PL GP + A P G + HVPP +
Sbjct: 957 E------TGFGRHHDPLAYI--GPAERAAANPGLPVPVGLFMNMAHVPPRFYNQHQQALQ 1008
Query: 943 AGRGSAGAPIGSHLQHQQNTQQPIGTI-------GSTFNFPSLENSNSQPSVGGPLTQPG 995
A RG+AG G + QQ GS FN + + SQP GPL+QPG
Sbjct: 1009 ARRGAAGPAKGPPPRRTARNQQQQQPPPGRRAPSGSQFNSQASQGVLSQPGGSGPLSQPG 1068
Query: 996 FVNNMPVQGPSQTFRDGFSVGSMSQDFLGDDFKSQGSHVCL 1036
V + F G + S ++ L D QG C
Sbjct: 1069 GVGALSQLSQESCFL-GEELRSQAEGMLSQDSSYQGDRHCF 1108
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 108/154 (70%), Gaps = 12/154 (7%)
Query: 102 GANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNV 161
G S+ + + + L+FEE +D +Y D EHAC+YCG+ +P CVV+CNV
Sbjct: 65 GEVRSNGLEVAAAGQALGELTFEEDEED----QYYAKDLPEHACKYCGIHDPGCVVQCNV 120
Query: 162 PSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFI 221
C++WFCN RGNTSGSH+VNHLVRAKHKEV LH+D PLGET+LECY+C CRNVF+LGFI
Sbjct: 121 --CKRWFCNGRGNTSGSHMVNHLVRAKHKEVTLHRDGPLGETVLECYSCACRNVFVLGFI 178
Query: 222 SAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
AK +SVVVLLCR PC +S KD + WD
Sbjct: 179 PAKADSVVVLLCRHPC---AAQSSLKD---MNWD 206
>gi|403412933|emb|CCL99633.1| predicted protein [Fibroporia radiculosa]
Length = 1074
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/603 (74%), Positives = 512/603 (84%), Gaps = 6/603 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++ ++++RWD+GLN+KRVA+F PK E E+RL GDELRL+YSG H W+
Sbjct: 289 LKESQTQTDISVRWDLGLNQKRVAWFCLPKLESGEVRLAVGDELRLKYSGQL-HKPWEGD 347
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +E+ LELR S+GVP ++ H ++ DFVWKSTSFDRMQ AMKTFAVDE SV
Sbjct: 348 GHVIKIPNNVSDEIGLELRRSEGVPTEVTHNYTADFVWKSTSFDRMQLAMKTFAVDEKSV 407
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGHE+E Q++R +P+RF APGLPELN SQ++AVKSVLQ+PISLIQGPPGTG
Sbjct: 408 SGYIYHKLLGHELEPQVLRTHMPKRFSAPGLPELNHSQMYAVKSVLQKPISLIQGPPGTG 467
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA+ VYH+AK GQVLVCAPSNVAVDQL EKI ATGLKVVRL AKSREA+ S V
Sbjct: 468 KTVTSASTVYHLAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLTAKSREALDSSVS 527
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV + T EL KL QLK+EQGELSS+DE+KYKAL R E+EI +ADVICC
Sbjct: 528 FLTLHQQVANYTT--HVELQKLIQLKNEQGELSSNDERKYKALIRQCEKEILSAADVICC 585
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVGAGDPRL+ +FR VLIDE+TQA EPEC+IPLVLG KQVVLVGDH QLGPVIM KKA
Sbjct: 586 TCVGAGDPRLSKLKFRTVLIDEATQAAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKA 645
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL QSLFERLV+LG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT ER +
Sbjct: 646 ARAGLTQSLFERLVVLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNV 705
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPVP+ PMFFY +GQEEIS+SGTS+LNRTEA+NVEKIVT F +SGVVPSQIGV+TP
Sbjct: 706 DFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPSQIGVVTP 765
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVNYM NG+L++ LYKEIEVASVD+FQGREKDYIILSCVRSNEHQGIGFLND
Sbjct: 766 YEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLND 825
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRA+YG+VILGNPKVLSK PLW+ LLTHYKE CLVEGPL+NL+ SM+QF K
Sbjct: 826 PRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEKNCLVEGPLSNLQPSMIQFSK 885
Query: 838 PKK 840
P++
Sbjct: 886 PRR 888
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 120/191 (62%), Gaps = 21/191 (10%)
Query: 92 LAATSSPSKRGANNSSNTSTSQIVEGMAGLS--FEETGDDVEGFEYGKADFTEHACRYCG 149
L + S R +S N + Q V AG+ F+ DD++ + + D HAC YCG
Sbjct: 42 LESLSLTDDRSYVSSPNGGSGQGV-ARAGIDEDFDAVLDDLK--DESQVDLPPHACSYCG 98
Query: 150 VSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYN 209
+ +PA VV+C V C KWFCNSRGNTS SHIVNHLVRAKHKEV LH +SPLGETI ECYN
Sbjct: 99 IHSPASVVKCIV--CSKWFCNSRGNTSASHIVNHLVRAKHKEVILHSESPLGETIPECYN 156
Query: 210 CGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGL------NKKRV 263
CG +NVF+LGFI AK+++VVVLLCR+PC + K+ I W+ L ++ +
Sbjct: 157 CGSKNVFMLGFIPAKSDTVVVLLCRQPCAAISKD--------ISWNAALWAPLIDDRSFL 208
Query: 264 AYFVFPKEDNE 274
++ V P + E
Sbjct: 209 SWLVKPPSETE 219
>gi|393245688|gb|EJD53198.1| ATP dependent helicase [Auricularia delicata TFB-10046 SS5]
Length = 1072
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/643 (70%), Positives = 524/643 (81%), Gaps = 11/643 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++ ++ +RWD+GLN+KRVA+F PK E E+RL GDELRLRY+G+ H W+ +
Sbjct: 285 LKESQTQSDIIVRWDLGLNQKRVAWFTMPKLESGEVRLAVGDELRLRYAGEM-HKPWECI 343
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +E+ALELR S GVP D H F DFVWKSTSFDRMQ AMKTFAVDE SV
Sbjct: 344 GHVIKIPNNVSDEIALELRRSDGVPTDCTHNFVADFVWKSTSFDRMQLAMKTFAVDEKSV 403
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIY LLGHE+E Q++R T+P+RF APGLPELN SQ++AVKSVLQ+P+SLIQGPPGTG
Sbjct: 404 SGYIYLKLLGHELEPQVIRTTMPKRFSAPGLPELNHSQMYAVKSVLQKPLSLIQGPPGTG 463
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA+IVYH+AK GQVLVCAPSNVAVDQL EKI ATGLKVVRL AKSREA+ S +
Sbjct: 464 KTVTSASIVYHLAKMNHGQVLVCAPSNVAVDQLTEKIHATGLKVVRLTAKSREALDSSIS 523
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV +++ EL KL QLK+EQGELSS+DE+KYKAL R E+EI +ADVIC
Sbjct: 524 FLTLHQQV--ANSTSHVELQKLIQLKNEQGELSSNDERKYKALVRTCEKEILAAADVICT 581
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVGAGD RL+ F+FR VLIDE+TQA EPEC+IPLVLG KQ VLVGDH QLGPVIM KKA
Sbjct: 582 TCVGAGDLRLSKFKFRTVLIDEATQAAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKA 641
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL QSLFERLVL+G +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT ER +
Sbjct: 642 ARAGLTQSLFERLVLIGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNV 701
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWP P+ PMFFY +GQEEIS+SGTS+LNRTEAANVEKIVT F +SGVVPSQIGVITP
Sbjct: 702 DFPWPAPDTPMFFYQNLGQEEISSSGTSFLNRTEAANVEKIVTKFFKSGVVPSQIGVITP 761
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVNYM NG+L++ LYKEIEVASVD+FQGREKDYIILSCVRSNEHQGIGFLND
Sbjct: 762 YEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLND 821
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRA+YG+VILGNPKVLSK PLW+ LLTHYKE CLV+GPL+NL+ SM+QF +
Sbjct: 822 PRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEKNCLVDGPLSNLQPSMIQFSR 881
Query: 838 PKKIYND-----RRLFFGAGPGIVPNDISTSNPNADRRGSRAR 875
P+K + RR A ++ I + P R G+ +R
Sbjct: 882 PRKALSKAMEQFRRHEVSAKEVMLSPTIGFTEPADRRSGTPSR 924
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 117/194 (60%), Gaps = 35/194 (18%)
Query: 106 SSNTSTSQIVEGMAGLSFEET--------------GDDVEGF-----EYGKADFTEHACR 146
++NT+ Q+ E + L+ + DD+EG E G D HAC
Sbjct: 32 TTNTTRRQLAEELESLALVDEHNKRSALQGKGPGGEDDLEGVLDEMKEDGHVDLPPHACS 91
Query: 147 YCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILE 206
YCG+ +PA VV+C V C KWFCNSRGNTS SHIVNHLVRAKHKEV LH +SPLGETI E
Sbjct: 92 YCGIHSPASVVKCLV--CSKWFCNSRGNTSASHIVNHLVRAKHKEVILHAESPLGETIPE 149
Query: 207 CYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGL------NK 260
CYNCG +NVF LGFI AK+++VVVLLCR+PC + K+ I W+ L ++
Sbjct: 150 CYNCGSKNVFTLGFIPAKSDTVVVLLCRQPCAAVSKD--------ISWNASLWNPLIDDR 201
Query: 261 KRVAYFVFPKEDNE 274
+++ V P + E
Sbjct: 202 TFLSWLVKPPTETE 215
>gi|303275724|ref|XP_003057156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461508|gb|EEH58801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1100
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/632 (71%), Positives = 519/632 (82%), Gaps = 6/632 (0%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSG---DAAHPAWQS 298
KESQSKD + +RWD+GLNK+RVAYF FP ++ RL+ GDEL+LR+ G D W
Sbjct: 321 KESQSKDGLVVRWDVGLNKRRVAYFTFPSDEEVARLMVGDELQLRHVGTNADGTRTTWVG 380
Query: 299 VGHVIKLTAQEEVALELRASQG-VPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
VG V+K TA EEV LELR+ G PV+ + GFSVDF+WKSTSFDRMQ AMK FA+DETSV
Sbjct: 381 VGSVLKFTANEEVGLELRSGGGKAPVEHSTGFSVDFLWKSTSFDRMQAAMKAFALDETSV 440
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGH+V+ Q +R TLP+R AP LPELN SQV AV SVL+RP+SLIQGPPGTG
Sbjct: 441 SGYIYHLLLGHDVDPQELRTTLPQRMSAPNLPELNHSQVNAVASVLRRPLSLIQGPPGTG 500
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+A+Q QGQV+VCAPSNVAVDQLAEKI TGLKVVR+ AKSREAV SPVE
Sbjct: 501 KTVTSATIVYHLAQQNQGQVIVCAPSNVAVDQLAEKIEQTGLKVVRVAAKSREAVLSPVE 560
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
HLTLHYQV HLD+ E +EL KLQQLKDE GELSS+DE+KY+ALKRATEREI QSADV+C
Sbjct: 561 HLTLHYQVAHLDSPEHAELAKLQQLKDELGELSSNDERKYRALKRATEREILQSADVVCT 620
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
T VGAGDPRLANFRFRQVL+DESTQATEPECLIPL++GAKQVV+VGDHCQLGPV+ CKKA
Sbjct: 621 TAVGAGDPRLANFRFRQVLMDESTQATEPECLIPLIMGAKQVVMVGDHCQLGPVVACKKA 680
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL QSLFERL+LLG++PIRLQVQYRMHP LSEFPSN+FYEG LQNGV ER + +
Sbjct: 681 ARAGLGQSLFERLILLGVQPIRLQVQYRMHPCLSEFPSNTFYEGALQNGVAAAERLMTHV 740
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
+FPWP P+ PM F+ G EEISASGTSYLNRTEA +VEKIVT FLR+GV P +GV+TP
Sbjct: 741 NFPWPKPSTPMMFWSMTGAEEISASGTSYLNRTEAVSVEKIVTHFLRAGVAPEALGVVTP 800
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQRAY+V +M+R G LRQQLY EI+VASVDSFQGREKD+IILSCVRSNE GIGFLND
Sbjct: 801 YEGQRAYVVQHMTRAGVLRQQLYNEIQVASVDSFQGREKDFIILSCVRSNEKAGIGFLND 860
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVA+TRAR G+VILGNPKVLS+QPL++ LL H+++ ECLVEGPLN LK+ + K
Sbjct: 861 PRRLNVAMTRARSGLVILGNPKVLSRQPLFHDLLQHFRDCECLVEGPLNALKECAMTLSK 920
Query: 838 PKKIYNDRRLFF--GAGPGIVPNDISTSNPNA 867
PK R GA P P + +S P A
Sbjct: 921 PKSHRPGRSYIAPPGANPDFRPMEAHSSAPGA 952
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 72/100 (72%), Gaps = 3/100 (3%)
Query: 141 TEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT-SGSHIVNHLVRAKHKEVCLHKDSP 199
E AC YCG+ +PACV +C KWFCNSR NT S +V HLVR+++KEVCLH+DSP
Sbjct: 87 AEWACAYCGIQDPACVAKCVATG--KWFCNSRHNTLPASCLVYHLVRSRNKEVCLHRDSP 144
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLN 239
LGE ILECY G RNVF LGF+ K E VVVLL R+P +N
Sbjct: 145 LGEMILECYLTGQRNVFTLGFVPCKDEEVVVLLARDPAMN 184
>gi|392567037|gb|EIW60212.1| ATP dependent helicase, partial [Trametes versicolor FP-101664 SS1]
Length = 1084
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/681 (67%), Positives = 537/681 (78%), Gaps = 28/681 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++ ++T+RWD+GLN+KRVA+F PK E E+RL GDELRL+Y+G H W+
Sbjct: 294 LKESQTQTDITVRWDLGLNQKRVAWFGLPKLESGEVRLAVGDELRLKYNG-TLHKPWEGD 352
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +E+ LELR S+GVP ++ HG++ DFVWKSTSFDRMQ AMKTFAVDE SV
Sbjct: 353 GHVIKIPNNVSDEIGLELRRSEGVPTEVTHGYTADFVWKSTSFDRMQLAMKTFAVDEKSV 412
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGHE+E Q++R +P+RF APGLPELN SQ+FAVKSVLQ+P+SLIQGPPGTG
Sbjct: 413 SGYIYHKLLGHELEPQVLRTQMPKRFSAPGLPELNHSQMFAVKSVLQKPLSLIQGPPGTG 472
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA+IVYH+AK GQVLVCAPSNVAVDQL EKI ATGLKVVRL AKSREA+ S V
Sbjct: 473 KTVTSASIVYHLAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLSAKSREALDSSVS 532
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV + + EL KL QLK+EQGELSS+DE+KYKAL R E+EI ADVICC
Sbjct: 533 FLTLHQQV--ANNTTHVELQKLIQLKNEQGELSSNDERKYKALIRQCEKEILGVADVICC 590
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVGAGDPRL+ +FR VLIDE+TQA EPEC+IPL+LG KQVVLVGDH QLGPVIM KKA
Sbjct: 591 TCVGAGDPRLSKLKFRTVLIDEATQAAEPECMIPLILGCKQVVLVGDHQQLGPVIMNKKA 650
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL QSLFERLV+LG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT ER +
Sbjct: 651 ARAGLTQSLFERLVVLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNV 710
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPVP+ PMFFY +GQEEIS+SGTS+LNRTEA+NVEKIVT F +SGVVPSQIGVITP
Sbjct: 711 DFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPSQIGVITP 770
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVNYM NG+L++ LYKEIEVASVD+FQGREKDYIILSCVRSNEHQGIGFLND
Sbjct: 771 YEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLND 830
Query: 778 PRRLNVALTRARYGIVILGNPKVLSK-----QPLWNGLLTHYKEHECLVEGPLNNLKQSM 832
PRRLNVALTRA+YG+VILGNPKVLSK PLW+ LLTHYKE CLVEGPL+NL+ SM
Sbjct: 831 PRRLNVALTRAKYGVVILGNPKVLSKLTRLQHPLWHYLLTHYKEKNCLVEGPLSNLQPSM 890
Query: 833 VQFQKPKKIY-----------NDRRLFFGAGPGIVPNDISTSNPN----ADRRGSRARGY 877
+QF KP++ + R + G G G++ + + P+ + R A GY
Sbjct: 891 IQFSKPRRTLVKAMDQFRRHETNARDYLGTG-GMMGDGRRSGTPSRFDASFYRTHDALGY 949
Query: 878 MPPGPPNGTHKPGLHPAGFPM 898
+ P + +G PM
Sbjct: 950 I-PSDAQSLRSQATYSSGIPM 969
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 108/155 (69%), Gaps = 8/155 (5%)
Query: 89 SDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYC 148
+D + TSSP+ + T + ++ F+ DD++ + G+ D HAC YC
Sbjct: 49 TDDRSFTSSPNGHSHGSHGKTPSRASLDE----DFDAVLDDLK--DEGQVDLPPHACSYC 102
Query: 149 GVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECY 208
G+ +PA VV+C + C KWFCNSRGNTS SHIVNHLVRAKHKEV LH +SPLGETI ECY
Sbjct: 103 GIHSPASVVKCLI--CSKWFCNSRGNTSASHIVNHLVRAKHKEVILHSESPLGETIPECY 160
Query: 209 NCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKE 243
NCG +NVF+LGFI AK+++VVVLLCR+PC + K+
Sbjct: 161 NCGSKNVFMLGFIPAKSDTVVVLLCRQPCAAVSKD 195
>gi|395333828|gb|EJF66205.1| ATP dependent helicase [Dichomitus squalens LYAD-421 SS1]
Length = 1060
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/603 (74%), Positives = 511/603 (84%), Gaps = 7/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KES ++ ++TIRWD+GLN+KRVA+F PK E E+RL GDELRL+Y+G H W+
Sbjct: 276 LKESLTQTDITIRWDLGLNQKRVAWFCLPKLESGEVRLAVGDELRLKYNG-GLHKPWEGD 334
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +E+ LELR S+GVP +I HG++ DFVWKSTSFDRMQ AMKTFAVDE SV
Sbjct: 335 GHVIKIPNNVSDEIGLELRRSEGVPTEITHGYTADFVWKSTSFDRMQLAMKTFAVDEKSV 394
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGHE+E Q++R +P+RF APGLPELN SQ++AVKSVLQ+P+SLIQGPPGTG
Sbjct: 395 SGYIYHKLLGHELEPQVLRTQMPKRFSAPGLPELNHSQMYAVKSVLQKPLSLIQGPPGTG 454
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA+IVYH+AK GQVLVCAPSNVAVDQL EKI ATGLKVVRL AKSREA+ S V
Sbjct: 455 KTVTSASIVYHLAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLSAKSREALDSSVS 514
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV + + EL KL QLK+EQGELSS+DE+KYKAL R E+EI +ADVICC
Sbjct: 515 FLTLHQQV--ANNTTHVELQKLIQLKNEQGELSSNDERKYKALIRQCEKEILGAADVICC 572
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVGAGDPRL+ +FR VLIDE+TQA EPEC+IPLVLG KQVVLVGDH QLGPVIM KKA
Sbjct: 573 TCVGAGDPRLSKLKFRTVLIDEATQAAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKA 632
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL QSLFERLV+LG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT ER +
Sbjct: 633 ARAGLTQSLFERLVVLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNV 692
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPVP+ PMFFY +GQEEIS+SGTS+LNR A+NVEKIVT F +SGVVPSQIGVITP
Sbjct: 693 DFPWPVPDTPMFFYQNLGQEEISSSGTSFLNR-RASNVEKIVTKFFKSGVVPSQIGVITP 751
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVNYM NG+L++ LYKEIEVASVD+FQGREKDYIILSCVRSNEHQGIGFLND
Sbjct: 752 YEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLND 811
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRA+YG+VILGNPKVLSK PLW+ LLTHYKE CLVEGPLNNL+ SM+QF K
Sbjct: 812 PRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEKNCLVEGPLNNLQPSMIQFSK 871
Query: 838 PKK 840
P++
Sbjct: 872 PRR 874
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 121/192 (63%), Gaps = 22/192 (11%)
Query: 89 SDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYC 148
+D + TSSP+ + T + ++ F+ DD++ + G+ D HAC YC
Sbjct: 31 TDDRSFTSSPNGHSHAVHNKTPSRNAIDE----DFDAVLDDLK--DEGQVDLPPHACSYC 84
Query: 149 GVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECY 208
G+ +PA VV+C + C KWFCNSRGNTS SHIVNHLVRAKHKEV LH +SPLGETI ECY
Sbjct: 85 GIHSPASVVKCLI--CSKWFCNSRGNTSASHIVNHLVRAKHKEVILHSESPLGETIPECY 142
Query: 209 NCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGL------NKKR 262
NCG +NVF+LGFI AK+++VVVLLCR+PC + K+ I W+ L ++
Sbjct: 143 NCGSKNVFMLGFIPAKSDTVVVLLCRQPCAAVSKD--------ISWNPALWAPLIDDRSF 194
Query: 263 VAYFVFPKEDNE 274
+++ V P + E
Sbjct: 195 LSWLVKPPSEQE 206
>gi|241598902|ref|XP_002404932.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
gi|215502402|gb|EEC11896.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
Length = 1122
Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/812 (58%), Positives = 580/812 (71%), Gaps = 47/812 (5%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+ +RWDIGLNKK +AYF K D ++RL+ GDELRLRY G+ H W VG
Sbjct: 300 LKESQTQDNIEVRWDIGLNKKMIAYFTVAKSDTDMRLMHGDELRLRYLGEL-HKPWSGVG 358
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +E++ + GVP + F VDFVWKSTSFDRMQ A++ FAVDE SVS
Sbjct: 359 HVIKIPDNYSEEVGIEMKTNLGVPSECTSNFVVDFVWKSTSFDRMQAALRKFAVDECSVS 418
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE ++R LP+ F AP LPELN SQV+AVK LQRP+SLIQGPPGTGK
Sbjct: 419 AYIYHKLLGHEVEDVVMRCQLPKHFSAPNLPELNRSQVYAVKHALQRPLSLIQGPPGTGK 478
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLK--VVRLCAKSREAVSSPV 476
TVTS IVYH+ KQ G VLVCAPSN+AVDQL EKI T LK VVRLCAKSREA++SPV
Sbjct: 479 TVTSGTIVYHLVKQSNGPVLVCAPSNIAVDQLTEKIHQTSLKAGVVRLCAKSREAINSPV 538
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH Q+R+++ SELHKLQQLKDE GELSS+DEK+Y+ LK+A ERE+ ++ADVIC
Sbjct: 539 SFLALHNQIRNMEG--HSELHKLQQLKDETGELSSADEKRYRMLKKACERELLEAADVIC 596
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGDPRLA F+F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKK
Sbjct: 597 CTCVGAGDPRLARFKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKK 656
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AARAGL+QSLFERLV+LG++P+RL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+ G
Sbjct: 657 AARAGLSQSLFERLVVLGIRPLRLEVQYRMHPQLSKFPSNFFYEGSLQNGVFADERRMKG 716
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
+DFPWP P++PM FY GQEE++ SGTSYLNRTEAA VEKI T FLRS V P QIG+IT
Sbjct: 717 VDFPWPQPDKPMLFYACQGQEEMAGSGTSYLNRTEAALVEKIATRFLRSAVKPQQIGIIT 776
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAY+V +M GAL +LY+EIEVASVD+FQGREKD I++SCVRSNEHQGIGFLN
Sbjct: 777 PYEGQRAYLVQHMQFQGALHAKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGFLN 836
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVALTRARYGI+I+GNPKVLSKQPLWN LL+ YKE+ LVEGPLNNLK+S++QF
Sbjct: 837 DPRRLNVALTRARYGIIIVGNPKVLSKQPLWNHLLSFYKENRVLVEGPLNNLKESLIQFS 896
Query: 837 KPKKIYND--------RRLFFGAGPGIVPNDI--STSNPNADR-RGSRARGYMP---PGP 882
KP+K+ N F A ++P + +S N + G R + P GP
Sbjct: 897 KPRKLINTVNPGGHFMSTTVFDAREAMIPGSVYDRSSQLNGNFPEGFTGRSHDPLAFIGP 956
Query: 883 PNGTHKPGL-HPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGF 941
P+ PGL P G M +PP Q RG GS+
Sbjct: 957 PDRATNPGLPVPVGLFMNMAHVPPRFYNQHQQALQARQRG---------------GSKSA 1001
Query: 942 GAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMP 1001
G + P+G QQ +Q + + S +F L +S S GPLTQPG +
Sbjct: 1002 GRRGVPSRQPVGGRRPGQQLSQPGLNSQASQ-DFLHLHHSPSPSPSQGPLTQPGPGGGVL 1060
Query: 1002 VQGPSQTFRDGFSVGSMSQD--FLGDDFKSQG 1031
QG G ++ +SQ+ FLG++ +SQ
Sbjct: 1061 SQG-------GVALSQLSQESCFLGEELRSQA 1085
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 103/138 (74%), Gaps = 12/138 (8%)
Query: 118 MAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
+ L+FEE +D +Y D +HAC+YCG+ +P CVV+CNV C++WFCN RGNTSG
Sbjct: 80 LGELTFEEDEED----QYYSKDLPDHACKYCGIHDPGCVVQCNV--CKRWFCNGRGNTSG 133
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
SH+VNHLVRAKHKEV LH+D PLGET+LECY+C CRNVF+LGFI AK +SVVVLLCR PC
Sbjct: 134 SHMVNHLVRAKHKEVTLHRDGPLGETVLECYSCACRNVFVLGFIPAKADSVVVLLCRHPC 193
Query: 238 LNMMKESQSKDNVTIRWD 255
+S KD + WD
Sbjct: 194 ---AAQSSLKD---MNWD 205
>gi|449685514|ref|XP_002161143.2| PREDICTED: regulator of nonsense transcripts 1-like [Hydra
magnipapillata]
Length = 1153
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/694 (66%), Positives = 532/694 (76%), Gaps = 31/694 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQS+DN+ +RWDIGLNKKR+AYF FP+ D E+RL+ GDELRLRY+G+ P W G
Sbjct: 337 LKESQSQDNIVVRWDIGLNKKRIAYFNFPRADGEMRLMQGDELRLRYNGEMRKP-WSGEG 395
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HV K+ EEV LELR + GVP + H FSVDF+WKSTSFDRMQ AMKTFAVDETSVS
Sbjct: 396 HVTKVPNNFGEEVGLELRKNDGVPTECTHHFSVDFIWKSTSFDRMQYAMKTFAVDETSVS 455
Query: 359 GYIYHHLLGHEVEVQMVRNTLP-RRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
GYIYH LLG L +RF APGLPELN SQV+AVK+VLQRP+SLIQGPPGTG
Sbjct: 456 GYIYHKLLGXXXLSISFFFFLIYKRFSAPGLPELNHSQVYAVKTVLQRPLSLIQGPPGTG 515
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA+IVYH+AKQG GQ+LVCAPSN+AVDQL EKI TGLKVVRL AKSREA+ SPV
Sbjct: 516 KTVTSASIVYHLAKQGLGQILVCAPSNIAVDQLTEKIHKTGLKVVRLAAKSREAIDSPVG 575
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
L LH QVR++D+ EL KLQQLKD+QGELSSSDEK+YK LK + E+E+ Q ADVIC
Sbjct: 576 FLALHNQVRNMDS--MPELQKLQQLKDDQGELSSSDEKRYKTLKTSAEKELLQHADVICT 633
Query: 538 TCVGAGDPRL--ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
TC+GAGDPRL A RFR VLIDESTQATEPEC++P+V G KQ+VLVGDHCQLGPV+MCK
Sbjct: 634 TCIGAGDPRLRVAKLRFRCVLIDESTQATEPECMVPIVHGTKQLVLVGDHCQLGPVVMCK 693
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
KAA AGL+QSLFERLV+LG++PIRLQVQYRMHPSLSEFPSN FY+GTLQNGVT+ ER
Sbjct: 694 KAASAGLSQSLFERLVVLGIRPIRLQVQYRMHPSLSEFPSNLFYDGTLQNGVTVAERSQP 753
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
G+DFPWPV ++PMFFY GQEEIS+SGTSYLNRTEAA VEKI T FLR+GV P Q+G+I
Sbjct: 754 GVDFPWPVGDKPMFFYATTGQEEISSSGTSYLNRTEAATVEKIATRFLRAGVKPEQMGII 813
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPYEGQRAYIV YM +G+L LY+ IEVASVD+FQGREKDYII+SC RSNEHQGIGFL
Sbjct: 814 TPYEGQRAYIVAYMQFSGSLHSSLYQNIEVASVDAFQGREKDYIIMSCARSNEHQGIGFL 873
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
DPRRLNVALTR++YG++I+GNPKVLSKQPLWN LL YKE LVEGPLNNLK+SM+QF
Sbjct: 874 KDPRRLNVALTRSKYGLIIIGNPKVLSKQPLWNHLLNDYKEKRVLVEGPLNNLKESMIQF 933
Query: 836 QKPKKIYND--------RRLFFGA-----GPGIVPNDISTSNPNAD------RRGSRARG 876
KP+K+ N F A PG+ PN + P+ D R
Sbjct: 934 SKPRKLVNRTNPGGRFMTNTMFDAREALLAPGMYPNR-NIRPPHVDPVMDSYYRTHDRMN 992
Query: 877 YMPPGPPNGTHKPGLH---PAGFPMPRVPLPPFQ 907
+ P GP + + P G M +P P +Q
Sbjct: 993 FFPTGPDQARNAFAANMPIPVGMFMSPMPPPTYQ 1026
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 98/135 (72%), Gaps = 3/135 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HACRYC + +PA V+ CN+ C+KWFCN RGNTSGSHI+NHLVR KHKEV LHKD PLGE
Sbjct: 138 HACRYCSIHDPASVILCNL--CKKWFCNGRGNTSGSHIINHLVRGKHKEVTLHKDGPLGE 195
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKR 262
T LECYNCGCRNVFLLGFI AK +SVVVLLCR+PC + S + T + ++
Sbjct: 196 TQLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCAQQSNKQDSTWDQTQWQPLIHDRCF 255
Query: 263 VAYFV-FPKEDNELR 276
+++ V P E +LR
Sbjct: 256 LSWLVKIPSEQEQLR 270
>gi|440904008|gb|ELR54581.1| Regulator of nonsense transcripts 1 [Bos grunniens mutus]
Length = 1156
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/811 (58%), Positives = 585/811 (72%), Gaps = 58/811 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 355 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 413
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 414 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 473
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 474 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 533
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 534 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 593
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 594 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 651
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 652 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 711
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 712 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 771
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 772 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 831
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 832 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 891
Query: 779 RRLNVALTRARYGIVIL-----GNPKVLSK-QPLWNGLLTHYKEHECLVEGPLNNLKQSM 832
RRLNVALTRARYG + L G P + W G +YKE + LVEGPLNNL++S+
Sbjct: 892 RRLNVALTRARYGELSLAGPCRGGPSCIGGFLRCWEG---YYKEQKVLVEGPLNNLRESL 948
Query: 833 VQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPN 884
+QF KP+K+ N + A I+P + + +G + Y
Sbjct: 949 MQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQI 1004
Query: 885 GTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRG 940
G G P+ +P+P PP +PPPG + G
Sbjct: 1005 GMISAG--PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANG 1041
Query: 941 FGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNM 1000
AGRG+ G + + P + + N + ++ SQP G LTQ G+++
Sbjct: 1042 PAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS-- 1098
Query: 1001 PVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+ PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1099 -MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1128
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 103/140 (73%), Gaps = 9/140 (6%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 117 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 169
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 170 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 227
Query: 220 FISAKTESVVVLLCREPCLN 239
FI AK +SVVVLLCR P L+
Sbjct: 228 FIPAKADSVVVLLCRLPQLS 247
>gi|345491350|ref|XP_001604124.2| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Nasonia vitripennis]
Length = 1105
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/826 (57%), Positives = 575/826 (69%), Gaps = 68/826 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 292 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 350
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 351 HVIKIPDNYGEEVGIELKNNSGAPTECTSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 410
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 411 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 470
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 471 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 530
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 531 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 588
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 589 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 648
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 649 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 708
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 709 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPY 768
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 769 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 828
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 829 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 888
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G TH
Sbjct: 889 KKLVN------AANPG--SHFMSTSMYDAREAIIPGSVYDRSGAQVNG-------TQTHN 933
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSA 948
P + VP+ F + Y P R A+++VP P G A
Sbjct: 934 P------YYQRNVPIDIFSRTHDTISYISPERAQ-----AAMNNVPVP----VGMFMNMA 978
Query: 949 GAPIGSHLQHQQNTQQP----------IGTIGSTFNFPSLENSNSQPSV--GGPLT---- 992
P + QHQQ Q + G+ S N+QP G PLT
Sbjct: 979 HVPPRFYNQHQQALQARQQNQRVRRGGVNMKGARLGKLSQSEQNTQPYSQPGLPLTQGTT 1038
Query: 993 ----QPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
QPGF + P ++ +D F+VG S L D QG
Sbjct: 1039 QGMSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1084
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 99/143 (69%), Gaps = 16/143 (11%)
Query: 135 YGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCL 194
Y D +HAC+YCG+ +CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV L
Sbjct: 98 YYNRDLPDHACKYCGIHEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTL 155
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKD-NVTIR 253
H+D PLGETILECY+C RNVF+LGFI AK +SVVVLLCR+PC +S KD N +
Sbjct: 156 HRDGPLGETILECYSCAVRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKDMNCFLS 212
Query: 254 WDIGLNKKRVAYFVFPKEDNELR 276
W + + P E +LR
Sbjct: 213 WLVKI----------PSEQEQLR 225
>gi|350406741|ref|XP_003487867.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3 [Bombus
impatiens]
Length = 1108
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/830 (57%), Positives = 578/830 (69%), Gaps = 74/830 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 293 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 351
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 352 HVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 411
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 412 GYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 471
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 472 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 531
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 532 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 589
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 590 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 649
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 650 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 709
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 710 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPY 769
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 770 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 829
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 830 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 889
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G H
Sbjct: 890 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGAQVNG-------TQNHN 934
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGA-----VHGPVGA---VHHVPP----- 935
P + VPL F + Y P R V PVG + HVPP
Sbjct: 935 P------YYQRNVPLDIFSRTHDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQ 988
Query: 936 -----------PGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQ 984
RG + G +G Q +QNTQ ++ P L +Q
Sbjct: 989 HQQALQARQNQRNRRGTALSKNKQGPRMGKLSQSEQNTQ--------PYSQPGL--PLTQ 1038
Query: 985 PSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
+ G ++QPGF + P ++ +D F+VG S L D QG
Sbjct: 1039 GTTQG-MSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1087
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/149 (57%), Positives = 104/149 (69%), Gaps = 15/149 (10%)
Query: 135 YGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCL 194
Y D EHAC+YCG+ +CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV L
Sbjct: 86 YYNRDLPEHACKYCGIHEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTL 143
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
H+D PLGET+LECY+C RNVF+LGFI AK +SVVVLLCR+PC +S KD + W
Sbjct: 144 HRDGPLGETVLECYSCAVRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKD---MNW 197
Query: 255 D------IGLNKKRVAYFV-FPKEDNELR 276
D + ++ +A+ V P E +LR
Sbjct: 198 DHEQWKPLIEDRSFLAWLVKIPSEQEQLR 226
>gi|340721325|ref|XP_003399073.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3 [Bombus
terrestris]
Length = 1106
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/830 (57%), Positives = 578/830 (69%), Gaps = 74/830 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 291 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 349
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 350 HVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 409
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 410 GYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 469
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 470 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 529
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 530 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 587
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 588 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 647
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 648 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 707
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 708 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPY 767
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 768 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 827
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 828 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 887
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G H
Sbjct: 888 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGTQVNG-------TQNHN 932
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGA-----VHGPVGA---VHHVPP----- 935
P + VPL F + Y P R V PVG + HVPP
Sbjct: 933 P------YYQRNVPLDIFSRTHDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQ 986
Query: 936 -----------PGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQ 984
RG + G +G Q +QNTQ ++ P L +Q
Sbjct: 987 HQQALQARQNQRNRRGTALSKNKQGPRMGKLSQSEQNTQ--------PYSQPGL--PLTQ 1036
Query: 985 PSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
+ G ++QPGF + P ++ +D F+VG S L D QG
Sbjct: 1037 GTTQG-MSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1085
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 120/187 (64%), Gaps = 18/187 (9%)
Query: 93 AATSSPSK-RGANNSSNTSTSQI-VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGV 150
AA S P++ N +S +S+ ++ + G A E ++ E Y D EHAC+YCG+
Sbjct: 53 AAQSQPNQPVQVNGTSGSSSLELKISGAAQSLAELQFEEEEEEAYYNRDLPEHACKYCGI 112
Query: 151 SNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNC 210
+CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV LH+D PLGET+LECY+C
Sbjct: 113 HEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSC 170
Query: 211 GCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKD-NVTIRWDIGLNKKRVAYFVFP 269
RNVF+LGFI AK +SVVVLLCR+PC +S KD N + W + + P
Sbjct: 171 AVRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKDMNCFLAWLVKI----------P 217
Query: 270 KEDNELR 276
E +LR
Sbjct: 218 SEQEQLR 224
>gi|350406738|ref|XP_003487866.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2 [Bombus
impatiens]
Length = 1106
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/830 (57%), Positives = 578/830 (69%), Gaps = 74/830 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 291 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 349
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 350 HVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 409
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 410 GYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 469
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 470 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 529
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 530 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 587
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 588 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 647
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 648 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 707
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 708 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPY 767
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 768 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 827
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 828 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 887
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G H
Sbjct: 888 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGAQVNG-------TQNHN 932
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGA-----VHGPVGA---VHHVPP----- 935
P + VPL F + Y P R V PVG + HVPP
Sbjct: 933 P------YYQRNVPLDIFSRTHDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQ 986
Query: 936 -----------PGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQ 984
RG + G +G Q +QNTQ ++ P L +Q
Sbjct: 987 HQQALQARQNQRNRRGTALSKNKQGPRMGKLSQSEQNTQ--------PYSQPGL--PLTQ 1036
Query: 985 PSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
+ G ++QPGF + P ++ +D F+VG S L D QG
Sbjct: 1037 GTTQG-MSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1085
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 120/187 (64%), Gaps = 18/187 (9%)
Query: 93 AATSSPSK-RGANNSSNTSTSQI-VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGV 150
AA S P++ N +S +S+ ++ + G A E ++ E Y D EHAC+YCG+
Sbjct: 53 AAQSQPNQPVQVNGTSGSSSLELKISGAAQSLAELQFEEEEEEAYYNRDLPEHACKYCGI 112
Query: 151 SNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNC 210
+CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV LH+D PLGET+LECY+C
Sbjct: 113 HEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSC 170
Query: 211 GCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKD-NVTIRWDIGLNKKRVAYFVFP 269
RNVF+LGFI AK +SVVVLLCR+PC +S KD N + W + + P
Sbjct: 171 AVRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKDMNCFLAWLVKI----------P 217
Query: 270 KEDNELR 276
E +LR
Sbjct: 218 SEQEQLR 224
>gi|340721323|ref|XP_003399072.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2 [Bombus
terrestris]
Length = 1108
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/830 (57%), Positives = 578/830 (69%), Gaps = 74/830 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 293 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 351
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 352 HVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 411
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 412 GYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 471
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 472 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 531
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 532 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 589
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 590 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 649
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 650 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 709
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 710 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPY 769
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 770 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 829
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 830 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 889
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G H
Sbjct: 890 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGTQVNG-------TQNHN 934
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGA-----VHGPVGA---VHHVPP----- 935
P + VPL F + Y P R V PVG + HVPP
Sbjct: 935 P------YYQRNVPLDIFSRTHDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQ 988
Query: 936 -----------PGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQ 984
RG + G +G Q +QNTQ ++ P L +Q
Sbjct: 989 HQQALQARQNQRNRRGTALSKNKQGPRMGKLSQSEQNTQ--------PYSQPGL--PLTQ 1038
Query: 985 PSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
+ G ++QPGF + P ++ +D F+VG S L D QG
Sbjct: 1039 GTTQG-MSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1087
Score = 179 bits (454), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/149 (57%), Positives = 104/149 (69%), Gaps = 15/149 (10%)
Query: 135 YGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCL 194
Y D EHAC+YCG+ +CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV L
Sbjct: 86 YYNRDLPEHACKYCGIHEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTL 143
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
H+D PLGET+LECY+C RNVF+LGFI AK +SVVVLLCR+PC +S KD + W
Sbjct: 144 HRDGPLGETVLECYSCAVRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKD---MNW 197
Query: 255 D------IGLNKKRVAYFV-FPKEDNELR 276
D + ++ +A+ V P E +LR
Sbjct: 198 DQEQWKPLIEDRSFLAWLVKIPSEQEQLR 226
>gi|383847287|ref|XP_003699286.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Megachile rotundata]
Length = 1106
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/830 (57%), Positives = 578/830 (69%), Gaps = 74/830 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 291 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 349
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 350 HVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 409
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 410 GYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 469
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 470 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 529
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 530 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 587
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 588 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 647
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 648 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 707
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 708 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPY 767
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 768 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 827
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 828 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 887
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G H
Sbjct: 888 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGTQVNG-------TQNHN 932
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGA-----VHGPVGA---VHHVPP----- 935
P + VPL F + Y P R V PVG + HVPP
Sbjct: 933 P------YYQRNVPLDIFSRTHDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQ 986
Query: 936 -----------PGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQ 984
RG + G +G Q +QNTQ ++ P L +Q
Sbjct: 987 HQQALQARQNQRNRRGTALSKNKQGPRMGKLSQTEQNTQ--------PYSQPGL--PLTQ 1036
Query: 985 PSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
+ G ++QPGF + P ++ +D F+VG S L D QG
Sbjct: 1037 GTTQG-MSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1085
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 113/175 (64%), Gaps = 20/175 (11%)
Query: 103 ANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVP 162
N+S + S + +A L FEE ++ Y D EHAC+YCG+ +CVV CN+
Sbjct: 69 GNSSLDLKISGAAQSLAELQFEEEEEEA----YYNRDLPEHACKYCGIHEASCVVMCNI- 123
Query: 163 SCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFIS 222
CRKWFCN RGNTSGSHI+NHLVRAKHKEV LH+D PLGET+LECY+C RNVF+LGFI
Sbjct: 124 -CRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVLGFIP 182
Query: 223 AKTESVVVLLCREPCLNMMKESQSKD-NVTIRWDIGLNKKRVAYFVFPKEDNELR 276
AK +SVVVLLCR+PC +S KD N + W + + P E +LR
Sbjct: 183 AKADSVVVLLCRQPC---AAQSSLKDMNCFLAWLVKI----------PSEQEQLR 224
>gi|340721321|ref|XP_003399071.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1 [Bombus
terrestris]
Length = 1119
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/830 (57%), Positives = 578/830 (69%), Gaps = 74/830 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 304 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 362
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 363 HVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 422
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 423 GYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 482
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 483 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 542
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 543 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 600
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 601 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 660
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 661 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 720
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 721 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPY 780
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 781 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 840
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 841 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 900
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G H
Sbjct: 901 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGTQVNG-------TQNHN 945
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGA-----VHGPVGA---VHHVPP----- 935
P + VPL F + Y P R V PVG + HVPP
Sbjct: 946 P------YYQRNVPLDIFSRTHDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQ 999
Query: 936 -----------PGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQ 984
RG + G +G Q +QNTQ ++ P L +Q
Sbjct: 1000 HQQALQARQNQRNRRGTALSKNKQGPRMGKLSQSEQNTQ--------PYSQPGL--PLTQ 1049
Query: 985 PSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
+ G ++QPGF + P ++ +D F+VG S L D QG
Sbjct: 1050 GTTQG-MSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1098
Score = 179 bits (454), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 125/193 (64%), Gaps = 17/193 (8%)
Query: 93 AATSSPSK-RGANNSSNTSTSQI-VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGV 150
AA S P++ N +S +S+ ++ + G A E ++ E Y D EHAC+YCG+
Sbjct: 53 AAQSQPNQPVQVNGTSGSSSLELKISGAAQSLAELQFEEEEEEAYYNRDLPEHACKYCGI 112
Query: 151 SNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNC 210
+CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV LH+D PLGET+LECY+C
Sbjct: 113 HEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSC 170
Query: 211 GCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD------IGLNKKRVA 264
RNVF+LGFI AK +SVVVLLCR+PC +S KD + WD + ++ +A
Sbjct: 171 AVRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKD---MNWDQEQWKPLIEDRSFLA 224
Query: 265 YFV-FPKEDNELR 276
+ V P E +LR
Sbjct: 225 WLVKIPSEQEQLR 237
>gi|350406734|ref|XP_003487865.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1 [Bombus
impatiens]
Length = 1119
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/830 (57%), Positives = 578/830 (69%), Gaps = 74/830 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 304 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 362
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 363 HVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 422
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 423 GYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 482
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 483 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 542
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 543 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 600
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 601 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 660
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 661 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 720
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 721 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPY 780
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 781 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 840
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 841 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 900
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G H
Sbjct: 901 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGAQVNG-------TQNHN 945
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGA-----VHGPVGA---VHHVPP----- 935
P + VPL F + Y P R V PVG + HVPP
Sbjct: 946 P------YYQRNVPLDIFSRTHDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQ 999
Query: 936 -----------PGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQ 984
RG + G +G Q +QNTQ ++ P L +Q
Sbjct: 1000 HQQALQARQNQRNRRGTALSKNKQGPRMGKLSQSEQNTQ--------PYSQPGL--PLTQ 1049
Query: 985 PSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
+ G ++QPGF + P ++ +D F+VG S L D QG
Sbjct: 1050 GTTQG-MSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1098
Score = 179 bits (454), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 125/193 (64%), Gaps = 17/193 (8%)
Query: 93 AATSSPSK-RGANNSSNTSTSQI-VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGV 150
AA S P++ N +S +S+ ++ + G A E ++ E Y D EHAC+YCG+
Sbjct: 53 AAQSQPNQPVQVNGTSGSSSLELKISGAAQSLAELQFEEEEEEAYYNRDLPEHACKYCGI 112
Query: 151 SNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNC 210
+CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV LH+D PLGET+LECY+C
Sbjct: 113 HEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSC 170
Query: 211 GCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD------IGLNKKRVA 264
RNVF+LGFI AK +SVVVLLCR+PC +S KD + WD + ++ +A
Sbjct: 171 AVRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKD---MNWDHEQWKPLIEDRSFLA 224
Query: 265 YFV-FPKEDNELR 276
+ V P E +LR
Sbjct: 225 WLVKIPSEQEQLR 237
>gi|322789964|gb|EFZ15058.1| hypothetical protein SINV_12997 [Solenopsis invicta]
Length = 966
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/827 (57%), Positives = 580/827 (70%), Gaps = 80/827 (9%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 149 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 207
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD++SVS
Sbjct: 208 HVIKIPDNYGEEVGIELKNNSGAPTECISNFVVDFIWKSTSFDRMQSALRKFAVDDSSVS 267
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 268 GYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 327
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 328 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 387
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 388 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 445
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 446 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 505
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 506 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 565
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 566 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPY 625
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 626 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 685
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 686 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 745
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ NGT
Sbjct: 746 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGTQV---------NGTQN 788
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHG-----PVGA---VHHVPP----- 935
H + VPL F + Y P R PVG + HVPP
Sbjct: 789 ---HNPYYQRNHVPLDIFSRTHDTISYISPERAQAAMNNMPVPVGMFMNMAHVPPRFYNQ 845
Query: 936 -----------PGSRGFGA-GRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNS 983
RG A R +G +G Q +QNTQ ++ P L +
Sbjct: 846 HQQALQARQNQRNRRGAAASARNKSGPRMGKLSQTEQNTQ--------PYSQPGL--PLT 895
Query: 984 QPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVGSMSQDFLGDDFKSQ 1030
Q + G ++QPGF + P ++ +D F+VG DF+SQ
Sbjct: 896 QGTTQG-MSQPGFSLSQPGLSQAELSQDSFAVG---------DFQSQ 932
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 13/88 (14%)
Query: 196 KDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+D PLGET+LECY+C RNVF+LGFI AK +SVVVLLCR+PC +S KD + WD
Sbjct: 1 RDGPLGETVLECYSCATRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKD---MNWD 54
Query: 256 ------IGLNKKRVAYFV-FPKEDNELR 276
+ ++ +++ V FP E +LR
Sbjct: 55 QEQWKPLIEDRSFLSWLVKFPSEQEQLR 82
>gi|383847285|ref|XP_003699285.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Megachile rotundata]
Length = 1119
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/830 (57%), Positives = 578/830 (69%), Gaps = 74/830 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 304 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 362
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 363 HVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 422
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 423 GYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 482
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 483 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 542
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 543 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 600
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 601 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 660
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 661 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 720
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 721 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPY 780
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 781 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 840
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 841 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 900
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G H
Sbjct: 901 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGTQVNG-------TQNHN 945
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGA-----VHGPVGA---VHHVPP----- 935
P + VPL F + Y P R V PVG + HVPP
Sbjct: 946 P------YYQRNVPLDIFSRTHDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQ 999
Query: 936 -----------PGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQ 984
RG + G +G Q +QNTQ ++ P L +Q
Sbjct: 1000 HQQALQARQNQRNRRGTALSKNKQGPRMGKLSQTEQNTQ--------PYSQPGL--PLTQ 1049
Query: 985 PSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
+ G ++QPGF + P ++ +D F+VG S L D QG
Sbjct: 1050 GTTQG-MSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1098
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 118/181 (65%), Gaps = 19/181 (10%)
Query: 103 ANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVP 162
N+S + S + +A L FEE ++ Y D EHAC+YCG+ +CVV CN+
Sbjct: 69 GNSSLDLKISGAAQSLAELQFEEEEEEA----YYNRDLPEHACKYCGIHEASCVVMCNI- 123
Query: 163 SCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFIS 222
CRKWFCN RGNTSGSHI+NHLVRAKHKEV LH+D PLGET+LECY+C RNVF+LGFI
Sbjct: 124 -CRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVLGFIP 182
Query: 223 AKTESVVVLLCREPCLNMMKESQSKDNVTIRWD------IGLNKKRVAYFV-FPKEDNEL 275
AK +SVVVLLCR+PC +S KD + WD + ++ +A+ V P E +L
Sbjct: 183 AKADSVVVLLCRQPC---AAQSSLKD---MNWDQEQWKPLIEDRSFLAWLVKIPSEQEQL 236
Query: 276 R 276
R
Sbjct: 237 R 237
>gi|66553048|ref|XP_393330.2| PREDICTED: regulator of nonsense transcripts 1 [Apis mellifera]
gi|380015761|ref|XP_003691864.1| PREDICTED: regulator of nonsense transcripts 1-like [Apis florea]
Length = 1119
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/830 (57%), Positives = 578/830 (69%), Gaps = 74/830 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 304 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 362
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 363 HVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 422
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 423 GYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 482
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 483 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 542
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 543 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 600
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 601 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 660
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 661 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 720
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 721 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPY 780
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 781 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 840
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 841 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 900
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G H
Sbjct: 901 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGTQVNG-------TQNHN 945
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGA-----VHGPVGA---VHHVPP----- 935
P + VPL F + Y P R V PVG + HVPP
Sbjct: 946 P------YYQRNVPLDIFSRTHDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQ 999
Query: 936 -----------PGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQ 984
RG + G +G Q +QNTQ ++ P L +Q
Sbjct: 1000 HQQALQARQNQRNRRGTSLSKNKQGPRMGKLSQTEQNTQ--------PYSQPGL--PLTQ 1049
Query: 985 PSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
+ G ++QPGF + P ++ +D F+VG S L D QG
Sbjct: 1050 GTTQG-MSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1098
Score = 179 bits (454), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/149 (57%), Positives = 104/149 (69%), Gaps = 15/149 (10%)
Query: 135 YGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCL 194
Y D EHAC+YCG+ +CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV L
Sbjct: 97 YYNRDLPEHACKYCGIHEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTL 154
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
H+D PLGET+LECY+C RNVF+LGFI AK +SVVVLLCR+PC +S KD + W
Sbjct: 155 HRDGPLGETVLECYSCAVRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKD---MNW 208
Query: 255 D------IGLNKKRVAYFV-FPKEDNELR 276
D + ++ +A+ V P E +LR
Sbjct: 209 DQEQWKPLIEDRSFLAWLVKIPSEQEQLR 237
>gi|409045768|gb|EKM55248.1| hypothetical protein PHACADRAFT_28301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1067
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/603 (72%), Positives = 504/603 (83%), Gaps = 14/603 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++ ++++RWD+GLN+KRVA+F PK E E+RL GDELRL+Y+G H W+
Sbjct: 292 LKESQTQTDISVRWDLGLNQKRVAWFCLPKLESGEVRLAVGDELRLKYTG-TLHKPWEGD 350
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHV+K+ +E+ LELR S+GVPVDI H ++VDFVWKSTSFDRMQ AMKTFAVDE SV
Sbjct: 351 GHVVKIPNNVSDEIGLELRRSEGVPVDITHNYTVDFVWKSTSFDRMQLAMKTFAVDEKSV 410
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGHE+E Q +R +P+RF APGLPELN SQ++AVKSVLQ+P+SLIQGPPGTG
Sbjct: 411 SGYIYHKLLGHELEPQTLRTQMPKRFSAPGLPELNHSQMYAVKSVLQKPLSLIQGPPGTG 470
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA+ VYH+AK GQVLVCAPSNVAVDQL EKI ATGLKVVRL AKSREA+ S V
Sbjct: 471 KTVTSASTVYHLAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLTAKSREALDSSVA 530
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV + + EL KL QLK+EQGELSS+DE+KYKAL R E+EI +ADVICC
Sbjct: 531 FLTLHQQV--ANNTTHVELQKLIQLKNEQGELSSNDERKYKALIRQCEKEILSAADVICC 588
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVGAGDPRL+ +FR VLIDE+TQA EP C KQVVLVGDH QLGPVIM KKA
Sbjct: 589 TCVGAGDPRLSKLKFRTVLIDEATQAAEPGC--------KQVVLVGDHQQLGPVIMNKKA 640
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL QSLFERLV+LG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT ER +
Sbjct: 641 ARAGLTQSLFERLVVLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNV 700
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPVP+ PMFFY +GQEEIS+SGTS+LNRTEA+NVEKIVT F +SGVVP+QIGV+TP
Sbjct: 701 DFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPNQIGVVTP 760
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVNYM NG L++ LYKEIEVASVD+FQGREKDYIILSCVRSNEHQGIGFLND
Sbjct: 761 YEGQRSYIVNYMQFNGTLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLND 820
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRA+YG+VILGNPKVLSK PLW+ LLTHYKE CLVEGPLNNL+ SM+QF K
Sbjct: 821 PRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEKNCLVEGPLNNLQPSMIQFSK 880
Query: 838 PKK 840
P++
Sbjct: 881 PRR 883
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 131/233 (56%), Gaps = 54/233 (23%)
Query: 48 PTPSDSLSVDPTTPVTPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSS 107
P DSLS+ +D RS + + H HH+H S
Sbjct: 38 PLDLDSLSI-----------TDDRSVVASPNGHSHHSH--------------------SQ 66
Query: 108 NTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKW 167
N + I E F+ DD++ + G+ D HAC YCG+ +PA VV+C V C+KW
Sbjct: 67 NANADGIDE-----DFDAVLDDLK--DEGQVDLPPHACSYCGIHSPASVVKCLV--CQKW 117
Query: 168 FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTES 227
FCNSRGNTS SHIVNHLVRAKHKEV LH +SPLGETI ECYNCG +NVF+LGFI AK+++
Sbjct: 118 FCNSRGNTSASHIVNHLVRAKHKEVILHAESPLGETIPECYNCGSKNVFMLGFIPAKSDT 177
Query: 228 VVVLLCREPCLNMMKESQSKDNVTIRWDIGL------NKKRVAYFVFPKEDNE 274
VVVLLCR+PC + K+ I W+ L ++ +++ V P + E
Sbjct: 178 VVVLLCRQPCAAVSKD--------ISWNASLWAPLIDDRSFLSWLVKPPSETE 222
>gi|345491348|ref|XP_003426578.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Nasonia vitripennis]
Length = 1121
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/829 (57%), Positives = 576/829 (69%), Gaps = 71/829 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 305 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 363
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 364 HVIKIPDNYGEEVGIELKNNSGAPTECTSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 423
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 424 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 483
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 484 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 543
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 544 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 601
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 602 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 661
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 662 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 721
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 722 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPY 781
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 782 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 841
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 842 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 901
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G TH
Sbjct: 902 KKLVN------AANPG--SHFMSTSMYDAREAIIPGSVYDRSGAQVNG-------TQTHN 946
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSA 948
P + VP+ F + Y P R A+++VP P G A
Sbjct: 947 P------YYQRNVPIDIFSRTHDTISYISPERAQ-----AAMNNVPVP----VGMFMNMA 991
Query: 949 GAPIGSHLQHQQNTQ-------------QPIGTIGSTFNFPSLENSNSQPSV--GGPLT- 992
P + QHQQ Q + G G+ S N+QP G PLT
Sbjct: 992 HVPPRFYNQHQQALQARQQNQRVRRGNNKVGGGGGARLGKLSQSEQNTQPYSQPGLPLTQ 1051
Query: 993 -------QPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
QPGF + P ++ +D F+VG S L D QG
Sbjct: 1052 GTTQGMSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1100
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 104/149 (69%), Gaps = 15/149 (10%)
Query: 135 YGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCL 194
Y D +HAC+YCG+ +CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV L
Sbjct: 98 YYNRDLPDHACKYCGIHEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTL 155
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
H+D PLGETILECY+C RNVF+LGFI AK +SVVVLLCR+PC +S KD + W
Sbjct: 156 HRDGPLGETILECYSCAVRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKD---MNW 209
Query: 255 D------IGLNKKRVAYFV-FPKEDNELR 276
D + ++ +++ V P E +LR
Sbjct: 210 DQEQWKPLIEDRSFLSWLVKIPSEQEQLR 238
>gi|384486429|gb|EIE78609.1| hypothetical protein RO3G_03313 [Rhizopus delemar RA 99-880]
Length = 1038
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/692 (65%), Positives = 535/692 (77%), Gaps = 23/692 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ D++ +RWD+GLN+K +A+F FPK E E++L GDELRLRY G+ P W++
Sbjct: 290 LKESQTCDDIVVRWDVGLNQKNIAWFYFPKLELGEIKLAVGDELRLRYRGELHEP-WEAT 348
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +EVALE+ P++ H FSVDFVWKSTSFDRMQ AMKTFAVDETSV
Sbjct: 349 GHVIKIPNNISDEVALEISRGGKPPIECTHNFSVDFVWKSTSFDRMQSAMKTFAVDETSV 408
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGH+VE Q+++ +P+RF AP LPELN SQV+AVKSVLQ+P+SLIQGPPGTG
Sbjct: 409 SGYIYHRLLGHDVEPQILKTQMPKRFSAPNLPELNHSQVYAVKSVLQKPLSLIQGPPGTG 468
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA+IVYH+AK GQVLVCAPSNVAVDQLAEKI TGLKVVR+ AKSRE + SPV
Sbjct: 469 KTVTSASIVYHLAKMNPGQVLVCAPSNVAVDQLAEKIHQTGLKVVRVTAKSREELDSPVS 528
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV++ DT+ EL KL LK +QGELS++DE+KY ALKRA E+EI +ADVICC
Sbjct: 529 FLTLHEQVQNNDTN--VELQKLIHLKRDQGELSAADERKYNALKRACEKEILANADVICC 586
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
T VGAGD R+AN RFR VLIDE+TQA+EPEC+IPLVLG KQ VLVGDH QLGP+IM KKA
Sbjct: 587 TSVGAGDSRIANLRFRTVLIDEATQASEPECMIPLVLGCKQAVLVGDHQQLGPIIMNKKA 646
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL QSLFERLV+LG++PIRLQVQYRMHP LSEFPSN FYEGTLQNG+T ER I
Sbjct: 647 ARAGLCQSLFERLVILGIRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGITTQERIRKDI 706
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPV PM FY +G EEIS SGTSYLNRTEA+N EKIVT F++SGV+PSQIGV+TP
Sbjct: 707 DFPWPVLETPMMFYANLGNEEISTSGTSYLNRTEASNCEKIVTRFMKSGVMPSQIGVVTP 766
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIV YM NG+LR+ LYKEIEVASVD+FQGREKDYIILSCVRSNEHQGIGFL+D
Sbjct: 767 YEGQRSYIVQYMQFNGSLRKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSD 826
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRA+YG+VILGNPK+LS+ PLW+ LL HYKE CLV+G LNNL+ SM+QF +
Sbjct: 827 PRRLNVALTRAKYGVVILGNPKILSRHPLWHHLLVHYKEKGCLVDGALNNLRVSMIQFNR 886
Query: 838 PKKIY-NDRRLFFGAGPGIVPNDISTS--NPNADRRGSRARGYMPPGPPNGTHKPGLHPA 894
P+K Y D + G + + PN +RR A+GY + P
Sbjct: 887 PRKTYRKDDKFRQGLAHQVDAREAFAKPPMPNDNRRS--AKGY------DQDFIQTHDPV 938
Query: 895 GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGP 926
G+ +P G PS ++IP + GP
Sbjct: 939 GY------IPSELGSLPSSQFSIPFIPSASGP 964
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 111/160 (69%), Gaps = 13/160 (8%)
Query: 97 SPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVE-GFEYGKADFTEHACRYCGVSNPAC 155
S G N +N +TS + + FE+T D E + + HAC+YCG+ +PA
Sbjct: 48 SLKDEGENAVANGTTSFVND----FQFEDTDDFGEIANSSEEKNLPPHACKYCGIHSPAS 103
Query: 156 VVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNV 215
VV+C +C +WFCNSRGNTSGSHI+NHLVRAKHKEV LH +SPLG+TILECYNCGCRNV
Sbjct: 104 VVKC--VTCDRWFCNSRGNTSGSHIINHLVRAKHKEVALHPESPLGDTILECYNCGCRNV 161
Query: 216 FLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FLLGFI AK+++VVVL+CR+PC + SKD + WD
Sbjct: 162 FLLGFIPAKSDTVVVLICRQPCAAV---PSSKD---MNWD 195
>gi|345491346|ref|XP_003426577.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Nasonia vitripennis]
Length = 1127
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/835 (56%), Positives = 575/835 (68%), Gaps = 77/835 (9%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 305 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 363
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 364 HVIKIPDNYGEEVGIELKNNSGAPTECTSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 423
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 424 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 483
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 484 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 543
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 544 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 601
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 602 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 661
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 662 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 721
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV P QIGVITPY
Sbjct: 722 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPY 781
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 782 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 841
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 842 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP 901
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNGTHK 888
KK+ N A PG + +STS +A DR G++ G TH
Sbjct: 902 KKLVN------AANPG--SHFMSTSMYDAREAIIPGSVYDRSGAQVNG-------TQTHN 946
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSA 948
P + VP+ F + Y P R A+++VP P G A
Sbjct: 947 P------YYQRNVPIDIFSRTHDTISYISPERAQ-----AAMNNVPVP----VGMFMNMA 991
Query: 949 GAPIGSHLQHQQNTQ-----QPIGTIGSTFNFP--------------SLENSNSQPSV-- 987
P + QHQQ Q Q + G S N+QP
Sbjct: 992 HVPPRFYNQHQQALQARQQNQRVRRGGVNMKGNNKVGGGGGARLGKLSQSEQNTQPYSQP 1051
Query: 988 GGPLT--------QPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
G PLT QPGF + P ++ +D F+VG S L D QG
Sbjct: 1052 GLPLTQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1106
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 104/149 (69%), Gaps = 15/149 (10%)
Query: 135 YGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCL 194
Y D +HAC+YCG+ +CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV L
Sbjct: 98 YYNRDLPDHACKYCGIHEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTL 155
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
H+D PLGETILECY+C RNVF+LGFI AK +SVVVLLCR+PC +S KD + W
Sbjct: 156 HRDGPLGETILECYSCAVRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKD---MNW 209
Query: 255 D------IGLNKKRVAYFV-FPKEDNELR 276
D + ++ +++ V P E +LR
Sbjct: 210 DQEQWKPLIEDRSFLSWLVKIPSEQEQLR 238
>gi|390344703|ref|XP_786803.3| PREDICTED: regulator of nonsense transcripts 1-like
[Strongylocentrotus purpuratus]
Length = 1386
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/855 (56%), Positives = 594/855 (69%), Gaps = 94/855 (10%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KE+Q+++ VT+RWDIGLN+K A F FPK++ +L+L+ GDELR+RY+ D P W +
Sbjct: 538 LKETQTQEGVTVRWDIGLNRKTRATFNFPKKE-DLKLMHGDELRVRYT-DPREP-WSGLA 594
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HV+K +E+ +EL++ +PV F+VDFVWKSTSFDRMQ A+KT AVD+T+VS
Sbjct: 595 HVVKTPDNYSDEICVELKSGSNIPVKFTTNFAVDFVWKSTSFDRMQNALKTLAVDDTAVS 654
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
Y+YH LLGH+VE +++ LP+RF A GLPELN SQV AV++VL RP+SLIQGPPGTGK
Sbjct: 655 SYLYHRLLGHDVENLVLKCNLPKRFSAQGLPELNHSQVSAVRTVLTRPLSLIQGPPGTGK 714
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA+IVYH+AKQG GQVLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 715 TVTSASIVYHLAKQGTGQVLVCAPSNIAVDQLTEKIHKTGLKVVRLCAKSREAIDSPVSF 774
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L+LH QVR+++ +E E+ KLQ LKDE GELSS+DEK+Y+ LKR ERE+ Q+ADVICCT
Sbjct: 775 LSLHNQVRNMEGAE--EMQKLQALKDEMGELSSNDEKRYRTLKRNCERELLQNADVICCT 832
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPR A FRFR VLIDESTQ+TEPECLIP VLG++Q+VLVGDHCQLGPV+MCKKAA
Sbjct: 833 CVGAGDPRFARFRFRAVLIDESTQSTEPECLIPAVLGSRQLVLVGDHCQLGPVVMCKKAA 892
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
AGL QSLFERLV+LG++PIRLQVQYRMHPSLS FPSN FYEG+LQNGVT ER + +D
Sbjct: 893 NAGLCQSLFERLVVLGIRPIRLQVQYRMHPSLSAFPSNIFYEGSLQNGVTAAERINRAVD 952
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FP+P P++PMFFY GQEEI++SGTSYLNRTEA+NVEK+ T FLR+GV P QIG+ITPY
Sbjct: 953 FPFPQPDKPMFFYATTGQEEIASSGTSYLNRTEASNVEKLTTRFLRAGVKPEQIGIITPY 1012
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRA+IV YM +G L +LY+E+E+ASVD+FQGREKDYIILSCVR+N+HQGIGFLNDP
Sbjct: 1013 EGQRAFIVQYMQYSGPLNVKLYQEVEIASVDAFQGREKDYIILSCVRANDHQGIGFLNDP 1072
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTR RYG++I+GNPKVLS+ PLWN LL++YKE + LVEGPLNNLK+S++QF KP
Sbjct: 1073 RRLNVALTRGRYGVIIVGNPKVLSRHPLWNHLLSYYKEQKVLVEGPLNNLKESLIQFSKP 1132
Query: 839 KKIYNDRR--------LFFGA----GPGIVPNDISTSN------PNADRRGSRARGYMPP 880
+K+ N F A PG V + SN P R GY+ P
Sbjct: 1133 RKLINPSNPGGRYMSMAMFDAREALAPGGVFDRSRMSNGGPSHFPANPGRVHDQMGYIQP 1192
Query: 881 GPPNGTHKPGLHPAGFPMPRVPL--PPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGS 938
++ + A FP+P PP G P G + PPP +
Sbjct: 1193 ------NQSRIAAANFPIPVNMFMPPPIPGAP-----------------GFFNQPPPPNA 1229
Query: 939 RGFGAGRGS--AGAPI-------------GSHLQHQQNTQ-------QPIGTIG----ST 972
RG G RG +G+P GS QQ+ +P GT G S
Sbjct: 1230 RGMGPNRGPNFSGSPGGGGGGRKRGRGYQGSQHPRQQHNNAASNGHGKPGGTSGSQNMSQ 1289
Query: 973 FNFPSLENSNSQPSVG-----GPLTQPGFVNNMPVQGPSQTFRDGFSVGSMSQ------- 1020
+N NSQP V G LTQ + P+ P + + GFS +SQ
Sbjct: 1290 YNLSLNSTQNSQPDVSQSFSQGVLTQGNMSMSQPMSQPGLS-QPGFSQMGLSQPGLSQPE 1348
Query: 1021 ----DFLGD-DFKSQ 1030
F+G+ +FKSQ
Sbjct: 1349 LSQESFMGESEFKSQ 1363
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 105/151 (69%), Gaps = 11/151 (7%)
Query: 105 NSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSC 164
N + + + + + + L+FEE +D D HAC+YCG+ +PA VV CN
Sbjct: 75 NGIDEAVAAVEQQVKELTFEEDEEDATVL---SKDLPNHACKYCGIHDPAAVVLCN--GT 129
Query: 165 RKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK 224
+KWFCN RGNTSGSHI+NHLVRAK KEV LHKDSPLGET+LECYNCGCRNVFLLGFI AK
Sbjct: 130 KKWFCNGRGNTSGSHIINHLVRAKCKEVTLHKDSPLGETVLECYNCGCRNVFLLGFIPAK 189
Query: 225 TESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+SVVVLLCR+PC +S KD + WD
Sbjct: 190 ADSVVVLLCRQPC---ATQSNLKD---MNWD 214
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 89/117 (76%), Gaps = 8/117 (6%)
Query: 139 DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDS 198
+F + YCG+ +PA VV CN +KWFCN RGNTSGSHI+NHLVRAK KEV LHKDS
Sbjct: 335 NFPKKEDLYCGIHDPAAVVLCN--GTKKWFCNGRGNTSGSHIINHLVRAKCKEVTLHKDS 392
Query: 199 PLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
PLGET+LECYNCGCRNVFLLGFI AK +SVVVLLCR+PC +S KD + WD
Sbjct: 393 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC---ATQSNLKD---MNWD 443
Score = 47.4 bits (111), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN 273
+KE+Q+++ VT+RWDIGLN+K A F FPK+++
Sbjct: 309 LKETQTQEGVTVRWDIGLNRKTRATFNFPKKED 341
>gi|344241326|gb|EGV97429.1| Regulator of nonsense transcripts 1 [Cricetulus griseus]
Length = 771
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/777 (59%), Positives = 569/777 (73%), Gaps = 55/777 (7%)
Query: 275 LRLVPGDELRLRYSGDAAHPAWQSVGHVIK----LTAQ----EEVALELRASQGVPVDIN 326
+RL+ GDE+ LRY GD A P W+ +GHVIK LT + +E+A+ELR+S G PV++
Sbjct: 1 MRLMQGDEICLRYKGDLA-PLWKGIGHVIKVPDNLTQRPDYGDEIAIELRSSVGAPVEVT 59
Query: 327 HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAP 386
H F VDFVWKSTSFDRMQ A+KTFAVDETSVSGYIYH LLGHEVE +++ LP+RF A
Sbjct: 60 HNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQ 119
Query: 387 GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVA 446
GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+A
Sbjct: 120 GLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIA 179
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQ 506
VDQL EKI TGLKVVRLCAKSREA+ SPV L LH Q+R++D+ EL KLQQLKDE
Sbjct: 180 VDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDET 237
Query: 507 GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEP 566
GELSS+DEK+Y+ALKR ERE+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEP
Sbjct: 238 GELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEP 297
Query: 567 ECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRM 626
EC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRM
Sbjct: 298 ECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRM 357
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP+LS FPSN FYEG+LQNGVT +R G DF WP P++PMFFYV GQEEI++SGTSY
Sbjct: 358 HPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSY 417
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
LNRTEAANVEKI T L++G P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+A
Sbjct: 418 LNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIA 477
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
SVD+FQGREKD+IILSCVR+NEHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPL
Sbjct: 478 SVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPL 537
Query: 807 WNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPN 858
WN LL++YKE + LVEGPLNNL++S++QF KP+K+ N + A I+P
Sbjct: 538 WNHLLSYYKEQKALVEGPLNNLRESLMQFSKPRKLVNTVNPGARFMTTAMYDAREAIIPG 597
Query: 859 DISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIP 918
+ + +G + Y G G P+ +P+P PP
Sbjct: 598 SVY----DRSSQGRPSNMYFQTHDQIGMISAG--PSHVAAMNIPIPFNLVMPP------- 644
Query: 919 SRGAVHGPVGAVHHVPPPG----SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFN 974
+PPPG + G AGRG+ + G + + P + + N
Sbjct: 645 --------------MPPPGYFGQANGPAAGRGTPKSKTGRGGRQKNRFGLPGPSQTTLPN 690
Query: 975 FPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+ ++ SQP G LTQ G+V+ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 691 SQASQDVASQPFSQGALTQ-GYVS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 743
>gi|307207583|gb|EFN85248.1| Regulator of nonsense transcripts 1 [Harpegnathos saltator]
Length = 1108
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/831 (56%), Positives = 576/831 (69%), Gaps = 74/831 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 291 LKESQTQENIEVRWDVGLNKKIIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 349
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + N F VDF+WKSTSFDRMQ A++ FAVD++SVS
Sbjct: 350 HVIKIPDNYGEEVGIELKNNSGAPTECNSNFVVDFIWKSTSFDRMQSALRKFAVDDSSVS 409
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 410 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 469
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 470 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 529
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++ADVICCT
Sbjct: 530 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT 587
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 588 CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 647
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ ID
Sbjct: 648 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID 707
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWPV ++PMFFYV GQEEI+ SGTSYLNRTEA+NVEKI T FLR GV QIGVITPY
Sbjct: 708 FPWPVQDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKSEQIGVITPY 767
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRA++V +M G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 768 EGQRAFLVQHMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 827
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQ LWN LL YKE + LVEGPLNNLK+SM+QF KP
Sbjct: 828 RRLNVALTRAKYGIIIVGNPKVLSKQALWNHLLNFYKEQKVLVEGPLNNLKESMIQFAKP 887
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNA----------DRRGSRARGYMPPGPPNG--T 886
KK+ N A PG + +STS +A DR GS G NG
Sbjct: 888 KKLVN------AANPG--SHFMSTSMYDAREALIPGSVYDRSGS--------GQVNGAQN 931
Query: 887 HKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRG 946
H P + +P+ F + Y P R A+++VP P G
Sbjct: 932 HNP------YYQRNMPVDMFSRTHDTISYISPERAQ-----AAMNNVPVP----VGMFMN 976
Query: 947 SAGAPIGSHLQHQ------QNTQQPIGTIGSTFNFP-------SLENSNSQPSV--GGPL 991
A P + QHQ QN + G + +T N S N+QP G PL
Sbjct: 977 MAHVPPRFYNQHQQAVQARQNQRNRRGVVSTTRNKSGPRLGKLSQTEQNTQPYSQPGLPL 1036
Query: 992 T--------QPGFVNNMPVQGPSQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
T QPGF + P ++ +D F+VG S L D QG
Sbjct: 1037 TQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQDSTYQG 1087
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 99/143 (69%), Gaps = 16/143 (11%)
Query: 135 YGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCL 194
Y D +HAC+YCG+ +CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV L
Sbjct: 97 YYNRDLPDHACKYCGIHEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTL 154
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKD-NVTIR 253
H+D PLGET+LECYNC RNVF+LGFI AK +SVVVLLCR+PC +S KD N +
Sbjct: 155 HRDGPLGETVLECYNCATRNVFVLGFIPAKADSVVVLLCRQPC---AAQSSLKDMNCFLS 211
Query: 254 WDIGLNKKRVAYFVFPKEDNELR 276
W + + P E +LR
Sbjct: 212 WLVKI----------PSEQEQLR 224
>gi|388580348|gb|EIM20663.1| hypothetical protein WALSEDRAFT_54922 [Wallemia sebi CBS 633.66]
Length = 941
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/610 (70%), Positives = 506/610 (82%), Gaps = 8/610 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+ ++ +RWDIGLN+KRVA+F PK E E++L GDELRL Y GD W +
Sbjct: 223 LKESQSQPDLIVRWDIGLNQKRVAWFSMPKLESGEVKLAVGDELRLSYRGDRD---WSGI 279
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHV+K+ +E+ALELR GVP+D+ HGF +FVWKSTSFDRMQ AMKTFAVDE SV
Sbjct: 280 GHVVKIPNNVSDEIALELRRQDGVPIDMTHGFEAEFVWKSTSFDRMQLAMKTFAVDEQSV 339
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGH++E Q+VR +P++F AP LPELN SQ++AVKSVLQ+P+SLIQGPPGTG
Sbjct: 340 SGYIYHKLLGHDLEPQVVRTQMPKKFSAPNLPELNHSQMYAVKSVLQKPLSLIQGPPGTG 399
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA++VYH++K GQVLVCAPSNVAVDQL EKI TGLK VRL AKSREAV SP+
Sbjct: 400 KTVTSASVVYHLSKMNPGQVLVCAPSNVAVDQLCEKIHLTGLKTVRLTAKSREAVDSPIS 459
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV +++ EL KL LK+EQGELSSSDE+K+K L R E+EI +ADVICC
Sbjct: 460 FLTLHEQVA--NSTHHIELQKLFMLKNEQGELSSSDERKFKTLTRVCEKEILNAADVICC 517
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVGAGDPRL+ +FR VLIDE+TQA EPEC IPL++G KQ VLVGDH QLGPVIM KKA
Sbjct: 518 TCVGAGDPRLSKLKFRTVLIDEATQAAEPECTIPLIMGCKQAVLVGDHQQLGPVIMNKKA 577
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL QSLFERLV+LG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT ER +
Sbjct: 578 ARAGLTQSLFERLVMLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNV 637
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWP+P+ PMFFY +GQEEIS+SGTS+LNRTEA+N EKIVT F ++GVVP+QIG++TP
Sbjct: 638 DFPWPIPDTPMFFYQNLGQEEISSSGTSFLNRTEASNCEKIVTKFFKAGVVPAQIGIVTP 697
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVNYM NGAL+++LY ++EVASVD+FQGREKDYIILSCVRSNEHQGIGFL+D
Sbjct: 698 YEGQRSYIVNYMQFNGALKKELYNQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSD 757
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVA+TRA+YG VILGNPK+LSK PLW+ LLTH+KE + LVEGPLNNL++SM++F K
Sbjct: 758 PRRLNVAMTRAKYGAVILGNPKILSKHPLWHHLLTHFKEKKTLVEGPLNNLQESMIRFNK 817
Query: 838 PKKIYNDRRL 847
P++ N L
Sbjct: 818 PRQPLNKATL 827
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/119 (64%), Positives = 96/119 (80%), Gaps = 8/119 (6%)
Query: 137 KADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHK 196
K D EHAC YCG+ NPACVV+C + C+KWFCN+RG+TSGSHIVNHLVR+KHK+V LH+
Sbjct: 18 KGDLPEHACNYCGIHNPACVVKCQI--CQKWFCNARGSTSGSHIVNHLVRSKHKQVILHQ 75
Query: 197 DSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+SPLGET ECYNCG +NVF+LGFI AK+++VVVLLCR+PC M + ++D I WD
Sbjct: 76 ESPLGETQPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAAM---TGTRD---IVWD 128
>gi|270001378|gb|EEZ97825.1| hypothetical protein TcasGA2_TC000192 [Tribolium castaneum]
Length = 1095
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/660 (65%), Positives = 515/660 (78%), Gaps = 14/660 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF K D +++L+ GDELRLRY G+ H +W VG
Sbjct: 296 LKESQTQENIEVRWDVGLNKKTIAYFTLAKTDGDMKLMHGDELRLRYVGEM-HKSWAGVG 354
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ E++ +EL+ G P D N F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 355 HVIKVPDNYGEDIGIELKNGNGAPTDCNSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 414
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK LQRP+SLIQGPPGTGK
Sbjct: 415 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGK 474
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI T LKVVRLCAKSREA+ SPV
Sbjct: 475 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKTNLKVVRLCAKSREAIDSPVSF 534
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R ++ + +EL KLQQLKDE GELSS DEK+Y+ LK+ E+E+ ++ADVICCT
Sbjct: 535 LALHNQIRKMEAN--TELQKLQQLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCT 592
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLG KQ++LVGDHCQLGPV+MCKKAA
Sbjct: 593 CVGAGDPRLVRLKFHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAA 652
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ + ID
Sbjct: 653 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKID 712
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWPV +RPMFF+V GQEEI+ SGTSYLNRTEAANVEKI T FLRSGV P QIGVITPY
Sbjct: 713 FPWPVIDRPMFFHVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQIGVITPY 772
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L + Y+EIE+ASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 773 EGQRAYLVQYMQYQGSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 832
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPL NLK+S++QF KP
Sbjct: 833 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLTNLKESLIQFAKP 892
Query: 839 KKIYNDRR--------LFFGAGPGIVPNDI-STSNPNADRRGSRARGYMPPGPPNGTHKP 889
KK+ N F A +VP I +N + + + RG +P + TH P
Sbjct: 893 KKLTNSDNPGSHFMTTSMFDAREAMVPGSIYDRTNTAINGQFNYPRGAVPLDIFSRTHDP 952
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
Query: 135 YGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCL 194
+ + +AC+YCG+ P CVV CN C+KWFCN RGNTSGSHI+NHLVRAKHKEV L
Sbjct: 89 FNSKELPNYACKYCGIHEPNCVVMCNC--CKKWFCNGRGNTSGSHIINHLVRAKHKEVTL 146
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
HKD PLGETILECY+CG RNVF+LGFI AK +SVVVLLCR+PC
Sbjct: 147 HKDGPLGETILECYSCGVRNVFVLGFIPAKADSVVVLLCRQPC 189
>gi|189234959|ref|XP_973320.2| PREDICTED: similar to nonsense-mediated mrna decay protein 1
(rent1) [Tribolium castaneum]
Length = 1090
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/660 (65%), Positives = 515/660 (78%), Gaps = 14/660 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF K D +++L+ GDELRLRY G+ H +W VG
Sbjct: 291 LKESQTQENIEVRWDVGLNKKTIAYFTLAKTDGDMKLMHGDELRLRYVGEM-HKSWAGVG 349
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ E++ +EL+ G P D N F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 350 HVIKVPDNYGEDIGIELKNGNGAPTDCNSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 409
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK LQRP+SLIQGPPGTGK
Sbjct: 410 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGK 469
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI T LKVVRLCAKSREA+ SPV
Sbjct: 470 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKTNLKVVRLCAKSREAIDSPVSF 529
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R ++ + +EL KLQQLKDE GELSS DEK+Y+ LK+ E+E+ ++ADVICCT
Sbjct: 530 LALHNQIRKMEAN--TELQKLQQLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCT 587
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL +F +LIDES QATEPEC++P+VLG KQ++LVGDHCQLGPV+MCKKAA
Sbjct: 588 CVGAGDPRLVRLKFHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAA 647
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ + ID
Sbjct: 648 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKID 707
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWPV +RPMFF+V GQEEI+ SGTSYLNRTEAANVEKI T FLRSGV P QIGVITPY
Sbjct: 708 FPWPVIDRPMFFHVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQIGVITPY 767
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L + Y+EIE+ASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 768 EGQRAYLVQYMQYQGSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 827
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL+ YKE + LVEGPL NLK+S++QF KP
Sbjct: 828 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLTNLKESLIQFAKP 887
Query: 839 KKIYNDRR--------LFFGAGPGIVPNDI-STSNPNADRRGSRARGYMPPGPPNGTHKP 889
KK+ N F A +VP I +N + + + RG +P + TH P
Sbjct: 888 KKLTNSDNPGSHFMTTSMFDAREAMVPGSIYDRTNTAINGQFNYPRGAVPLDIFSRTHDP 947
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
Query: 135 YGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCL 194
+ + +AC+YCG+ P CVV CN C+KWFCN RGNTSGSHI+NHLVRAKHKEV L
Sbjct: 84 FNSKELPNYACKYCGIHEPNCVVMCNC--CKKWFCNGRGNTSGSHIINHLVRAKHKEVTL 141
Query: 195 HKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
HKD PLGETILECY+CG RNVF+LGFI AK +SVVVLLCR+PC
Sbjct: 142 HKDGPLGETILECYSCGVRNVFVLGFIPAKADSVVVLLCRQPC 184
>gi|351713804|gb|EHB16723.1| Regulator of nonsense transcripts 1 [Heterocephalus glaber]
Length = 1068
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/815 (57%), Positives = 579/815 (71%), Gaps = 71/815 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 272 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 330
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 331 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 390
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 391 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 450
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 451 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 510
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 511 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 568
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 569 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 628
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 629 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 688
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 689 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 748
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 749 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 808
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNG------LLTHYKEHECLVEGPLNNLKQSM 832
RRLNVALTRAR P +W+ L +E + LVEG NNL++S+
Sbjct: 809 RRLNVALTRAR--------PAHPQPGSIWSAAGPDCRALLGLQEQKVLVEGAANNLRESL 860
Query: 833 VQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPN 884
+QF KP+K+ N + A I+P + + +G + Y
Sbjct: 861 MQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSNMYFQTHDQI 916
Query: 885 GTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRG 940
G G P+ +P+P PP +PPPG + G
Sbjct: 917 GMISAG--PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFGQANG 953
Query: 941 FGAGRGSAGAPIGSHLQHQQNTQQPIGTIG-STFNFPSLENSN---SQPSVGGPLTQPGF 996
AGRG+ + S Q+N G G S PS + S SQP G LTQ G+
Sbjct: 954 PAAGRGAPKSKT-SRGARQKNR---FGLPGPSQTPLPSSQASQDVASQPFSQGALTQ-GY 1008
Query: 997 VNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
++ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 1009 IS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1040
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 37 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHACSYCGIHDPACVVYC 89
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 90 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 147
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 148 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 177
>gi|342320526|gb|EGU12466.1| ATP dependent helicase [Rhodotorula glutinis ATCC 204091]
Length = 1086
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/607 (70%), Positives = 505/607 (83%), Gaps = 7/607 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++D + +RWD+GLN+KR+A+F PK E E+RL GDELRLRY+G+ H W+ V
Sbjct: 311 LKESQTQDGLVVRWDMGLNQKRIAWFNLPKLESGEVRLAVGDELRLRYNGEL-HKPWEGV 369
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +E+ALEL+ S VP+D H FS DFVWKSTSFDRMQ AM+TFAVDE SV
Sbjct: 370 GHVIKVPNNVSDEIALELKRSDHVPIDCTHNFSADFVWKSTSFDRMQQAMRTFAVDEQSV 429
Query: 358 SGYIYHHLLGHEVEV-QMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
SGYIYH L+GH+ + Q++R +P+R AP LP+LN SQ++AVKSVLQ+P+SLIQGPPGT
Sbjct: 430 SGYIYHKLMGHDADPPQVLRAQMPKRVSAPNLPDLNHSQIYAVKSVLQKPLSLIQGPPGT 489
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA+IVYH++K GQVLV APSNVAVDQL EKI TGLKVVR+ AKSREA+ S V
Sbjct: 490 GKTVTSASIVYHLSKMNPGQVLVAAPSNVAVDQLTEKIHQTGLKVVRVTAKSREALESSV 549
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
LTLH QV + DT EL KL QLK EQGELSSSDE+K+KAL R E+EI +ADVIC
Sbjct: 550 SFLTLHAQVANSDT--HPELSKLIQLKQEQGELSSSDERKFKALTRMVEKEILTNADVIC 607
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
TCVG GDPRL N +FR VLIDE+TQATEPEC+IPL G KQ+V+VGDH QLGP IM KK
Sbjct: 608 ATCVGCGDPRLKNLKFRTVLIDEATQATEPECMIPLTFGVKQLVMVGDHSQLGPTIMNKK 667
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AARAGL QSLFERL+LLG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT ER
Sbjct: 668 AARAGLNQSLFERLILLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKN 727
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
+DFPWP P PM+F+ +GQEEIS+SGTS+LNRTEA+NVEKIVT F ++GV+PSQIG+IT
Sbjct: 728 VDFPWPQPTTPMYFHQNLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVMPSQIGIIT 787
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQR+Y+V+YM NG+L+++LYKEIEVASVD+FQGREKDY+I+SCVRSNEHQGIGFLN
Sbjct: 788 PYEGQRSYLVSYMQMNGSLKKELYKEIEVASVDAFQGREKDYVIMSCVRSNEHQGIGFLN 847
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVALTRA+YG+VILGNPKVLSK LW+ LLTHYKE +CLVEGPLNNL+ SM+QF
Sbjct: 848 DPRRLNVALTRAKYGLVILGNPKVLSKHALWHYLLTHYKEKKCLVEGPLNNLQPSMIQFS 907
Query: 837 KPKKIYN 843
KP++ Y+
Sbjct: 908 KPRRPYD 914
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 110/155 (70%), Gaps = 11/155 (7%)
Query: 128 DDVEGF--EYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLV 185
+D +G + + + HAC YCG+ NPACVVRC + C KWFCN+RG+TSGSHIVNHLV
Sbjct: 95 EDFDGMLDDLNREELPPHACSYCGIHNPACVVRCLI--CNKWFCNARGSTSGSHIVNHLV 152
Query: 186 RAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQ 245
RAKHKEV LH +SPLGET ECY+CG +NVF+LGFI AK+++VVVLLCR+PC M
Sbjct: 153 RAKHKEVTLHAESPLGETTPECYSCGAKNVFILGFIPAKSDTVVVLLCRQPCAAMQS--- 209
Query: 246 SKDNV--TIRWD-IGLNKKRVAYFV-FPKEDNELR 276
SKD V T +W + ++ +++ V P E +LR
Sbjct: 210 SKDIVWDTTQWSPLIEDRSFLSWLVKVPSEQEQLR 244
>gi|391341257|ref|XP_003744947.1| PREDICTED: regulator of nonsense transcripts 1-like [Metaseiulus
occidentalis]
Length = 1137
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/841 (56%), Positives = 588/841 (69%), Gaps = 69/841 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++++++RWD+GLNKK +AYF + D ++RL+ GDELRLRY G+ H W VG
Sbjct: 289 LKESQTQEDISVRWDMGLNKKAIAYFAIARSDTDMRLMHGDELRLRYLGEL-HKPWTGVG 347
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +E++ + G+P + H F VDFVWKSTSFDRMQ A++ FAVDE SVS
Sbjct: 348 HVIKIPDNYSEEVGIEMKTNAGIPSECTHNFVVDFVWKSTSFDRMQAALRKFAVDEASVS 407
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGH+VE ++R LP++F AP LPELN SQV+AV+ LQRP+SLIQGPPGTGK
Sbjct: 408 AYIYHRLLGHDVEDIVLRCQLPKQFSAPNLPELNRSQVYAVRHALQRPLSLIQGPPGTGK 467
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY +AKQG G VLVCAPSN+AVDQL EKI T LKVVRLCAKSREA++SPV
Sbjct: 468 TVTSATIVYQLAKQGHGPVLVCAPSNIAVDQLTEKIHRTRLKVVRLCAKSREAINSPVSF 527
Query: 479 LTLHYQVRHLDTSEK---SELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVI 535
L LH QVR+++ + SEL KLQQLKDE GELSS+DEK+Y+ LKR ERE+ ++ADVI
Sbjct: 528 LALHNQVRNMEVNASQHISELKKLQQLKDETGELSSADEKRYRILKRLCERELLEAADVI 587
Query: 536 CCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
CCTCVGAGDPR+ F+F +LIDE QATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCK
Sbjct: 588 CCTCVGAGDPRILRFKFHSILIDECMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCK 647
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
AARAGL+QSLFERLV+LG++P+RL+VQYRMHPSLSEFPSN FYEG+LQNGV ER+
Sbjct: 648 GAARAGLSQSLFERLVVLGIRPLRLEVQYRMHPSLSEFPSNFFYEGSLQNGVYAEERRLK 707
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
G+DFP+P P++PMFFY GQEEI+ASGTSYLNRTEAA VEKIVT FL+S V P QIGVI
Sbjct: 708 GVDFPFPQPDKPMFFYCCNGQEEIAASGTSYLNRTEAALVEKIVTRFLKSSVKPEQIGVI 767
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPYEGQRA++V YM +G+L +LY++IEVASVD+FQGREKD II+SCVRSNEHQGIGFL
Sbjct: 768 TPYEGQRAFLVQYMQYSGSLHSKLYQDIEVASVDAFQGREKDLIIMSCVRSNEHQGIGFL 827
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
NDPRRLNVALTRARYGI+I+GNPKVLSKQPLWN LL YK + +VEGPL NL+++M+
Sbjct: 828 NDPRRLNVALTRARYGIIIVGNPKVLSKQPLWNHLLAFYKNNSVVVEGPLTNLRETMLHI 887
Query: 836 QKPKKIYNDRRLFFGAGPG-------IVPNDISTSNPNA-----DRRGS----------- 872
+PKK+ N A PG + D S S N+ DR G
Sbjct: 888 TRPKKMMN------SANPGCHFMNTAMFTRDSSQSGSNSLGGLLDRTGPGSHYSAQQAQW 941
Query: 873 RARGYMPPG--PPNGTHKPGLHPAGFPMP-RVPLPPF-----QGGP-----PSQPYAIPS 919
RA +P G P + P+ F M +P+ F Q GP P++ +++PS
Sbjct: 942 RAENVLPYGRDPMSFISSERTAPSAFNMSTTLPMSMFMTHLGQHGPGLPHGPARYFSMPS 1001
Query: 920 RGAVHGPVGAVHHVPPPGSRGFGAGRGSAGA-PIGSHL--QHQQNTQQPIGTIGSTFNFP 976
+ G+R + P +H+ QH Q TQ G S F+
Sbjct: 1002 ---MQQTAAQSRMKSTKGARVATKKPVRVNSTPNSNHMMSQHDQLTQN-FGQDASLFS-- 1055
Query: 977 SLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVGS---MSQDFLGD---DFKSQ 1030
+N +Q G LTQP N+ G T R FSVG +SQD G DFKSQ
Sbjct: 1056 --QNPLTQGGDGSVLTQPQ--NDASQIG--DTGRSQFSVGDNLMLSQDPYGTSGLDFKSQ 1109
Query: 1031 G 1031
Sbjct: 1110 A 1110
Score = 176 bits (445), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 97/122 (79%), Gaps = 8/122 (6%)
Query: 117 GMAGLSFEETGDD-VEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 175
+A L+FE+ +D VE E +HAC+YCG+ +P CV++CN+ C+KWFCN RG+T
Sbjct: 68 ALAELNFEDEQEDAVEPRE-----LPQHACKYCGIHDPGCVMQCNI--CKKWFCNGRGST 120
Query: 176 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
SGSH+VNHLVRAKH+EV LH+D PLGET+LECY CGCRNVF+LGFI AK +SVVVLLCR
Sbjct: 121 SGSHMVNHLVRAKHREVTLHRDGPLGETVLECYTCGCRNVFVLGFIPAKADSVVVLLCRH 180
Query: 236 PC 237
PC
Sbjct: 181 PC 182
>gi|358055738|dbj|GAA98083.1| hypothetical protein E5Q_04765 [Mixia osmundae IAM 14324]
Length = 1047
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/607 (70%), Positives = 500/607 (82%), Gaps = 7/607 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+Q++D++ +RWD+GLN+KRVA+F PK E E+RL GDEL+LRY G H W +
Sbjct: 306 LKEAQTQDDLIVRWDMGLNQKRVAWFRLPKLESGEVRLAVGDELKLRYDG-TLHKHWDGL 364
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +EVALELR + GVP D H FS DF+WKSTSFDRMQ AMKTFAVDE SV
Sbjct: 365 GHVIKVPNNISDEVALELRKNDGVPHDCTHNFSADFIWKSTSFDRMQLAMKTFAVDEQSV 424
Query: 358 SGYIYHHLLGHEVEV-QMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
SGYIYH L+GHE V ++R +P+R AP LP+LN SQV+AVKSVLQ+P+SLIQGPPGT
Sbjct: 425 SGYIYHKLMGHEAAVPTVLRTPMPKRVSAPNLPDLNHSQVYAVKSVLQKPLSLIQGPPGT 484
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA+IVYH+A QGQVLV APSNVAVDQL EKI TGLKVVR+ AKSREA+ S +
Sbjct: 485 GKTVTSASIVYHLATMSQGQVLVTAPSNVAVDQLTEKIHTTGLKVVRITAKSREALESSI 544
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
HLTLH QV + DT EL KL QLK EQGELSSSDE+K+K+L RA EREI +ADVIC
Sbjct: 545 SHLTLHEQVANNDT--HVELQKLIQLKTEQGELSSSDERKFKSLTRACEREILTNADVIC 602
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVG GDPRL+ +FR VLIDE+TQATEPEC+IPL G KQ+V+VGDH QLGP IM KK
Sbjct: 603 CTCVGCGDPRLSKIKFRTVLIDEATQATEPECMIPLTFGVKQLVMVGDHSQLGPTIMSKK 662
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AARAGL QSLFERLVLLG +PIRLQVQYRMHP LSEFPSN FYEG+LQNGVT ER
Sbjct: 663 AARAGLTQSLFERLVLLGNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKN 722
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
+DFPWP P PM+F+ +GQEEIS+SGTS+LNRTEAANVEK+VT +SGV+P QIG++T
Sbjct: 723 VDFPWPQPTTPMYFHQNLGQEEISSSGTSFLNRTEAANVEKVVTRLFKSGVMPHQIGIVT 782
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI NYM NG+L+++LYK+IEVASVD+FQGREKDYI+LSCVRSNEHQGIGFLN
Sbjct: 783 PYEGQRAYIANYMLFNGSLKKELYKDIEVASVDAFQGREKDYILLSCVRSNEHQGIGFLN 842
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVALTRA+YG+VILGNPKVLSK LW+ LLTHYKE CLVEGPL+NL+ S++Q
Sbjct: 843 DPRRLNVALTRAKYGLVILGNPKVLSKHALWHYLLTHYKEKGCLVEGPLSNLQPSLIQLS 902
Query: 837 KPKKIYN 843
KP++ YN
Sbjct: 903 KPRRPYN 909
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/145 (55%), Positives = 101/145 (69%), Gaps = 15/145 (10%)
Query: 139 DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDS 198
D HAC YCG+ N ACV+ C +C +WFCNSRG+TSGSHIVNHLVRAKHKEV LH+D
Sbjct: 103 DLPPHACSYCGIHNAACVIEC--LTCHRWFCNSRGSTSGSHIVNHLVRAKHKEVKLHQDG 160
Query: 199 PLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGL 258
PLG+T+ ECYNCG +NVF+LGFI AK+++VVVLLCR+PC + SKD I WD
Sbjct: 161 PLGDTVPECYNCGAKNVFILGFIPAKSDTVVVLLCRQPCAAVQT---SKD---IIWDTAQ 214
Query: 259 ------NKKRVAYFV-FPKEDNELR 276
++ +++ V P E +LR
Sbjct: 215 WSPLIEDRSFLSWLVKVPTEQEQLR 239
>gi|47217411|emb|CAG00771.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1186
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/669 (64%), Positives = 518/669 (77%), Gaps = 69/669 (10%)
Query: 241 MKESQS-KDNVTIRWDIGLNKKRVAYFVFPKEDN------------ELRLVPGDELRLRY 287
+KESQ + ++T+RWD+GLNKKR+AYF PK D+ ++RL+ GDE+ LRY
Sbjct: 301 LKESQVPRTDITVRWDLGLNKKRIAYFTLPKTDSGVYSFHSLPLSLDMRLMQGDEICLRY 360
Query: 288 SGDAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQG 345
GD A P W+ +GHVIK+ +E+A+ELR+S G PV+I H + VDFVWKSTSFDRMQ
Sbjct: 361 KGDLA-PLWKGIGHVIKVPDNYGDEIAIELRSSAGAPVEIPHNYQVDFVWKSTSFDRMQS 419
Query: 346 AMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQR 405
A+KTFAVDETSVSGYIYH LLGHEVE ++ LP+RF APGLP+LN SQV+AVK+VLQR
Sbjct: 420 ALKTFAVDETSVSGYIYHKLLGHEVEDVTIKCQLPKRFTAPGLPDLNHSQVYAVKTVLQR 479
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLC 465
P+SLIQGPPGTGKTVTSA IVYH+++QG G VLVCAPSN+AVDQL EKI TGLKVVRLC
Sbjct: 480 PLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIHKTGLKVVRLC 539
Query: 466 AKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATE 525
AKSREA+ SPV L LH Q+ ++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR E
Sbjct: 540 AKSREAIESPVSFLALHNQISNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAE 597
Query: 526 REISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV------ 579
RE+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQV
Sbjct: 598 RELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQVHTHTHT 657
Query: 580 ------------------VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQ 621
+LVGDHCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQ
Sbjct: 658 RAHNNRPCFSYPPSCPQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQ 717
Query: 622 VQYRMHPSLSEFPSNSFYEGTLQNGVTIN---------------------------ERQS 654
VQYRMHP+LS FPSN FYEG+LQNGVT +R
Sbjct: 718 VQYRMHPALSAFPSNIFYEGSLQNGVTAGWISLNALEMNATVKSEPHSQIGCLLAGDRIK 777
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
G DF WP P +PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+
Sbjct: 778 KGFDFQWPQPEKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGI 837
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V YM +G+L +LY+++E+ASVD+FQGREKD+IILSCVR+NEHQGIGF
Sbjct: 838 ITPYEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGF 897
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA+YG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++Q
Sbjct: 898 LNDPRRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQ 957
Query: 835 FQKPKKIYN 843
F KP+K+ N
Sbjct: 958 FSKPRKLVN 966
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 112/170 (65%), Gaps = 12/170 (7%)
Query: 86 HRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHAC 145
H S + P N + S ++ + +A L+FEE +D Y D HAC
Sbjct: 49 HTQSQLDNQINGPDDLLHNGGLDDSVAKASQLLAELNFEEDEEDT----YYTKDLPVHAC 104
Query: 146 RYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETIL 205
YCG+ +PACVV CN + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+L
Sbjct: 105 SYCGIHDPACVVYCN--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVL 162
Query: 206 ECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
ECYNCGCRNVFLLGFI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 163 ECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 206
>gi|134109641|ref|XP_776499.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/622 (68%), Positives = 506/622 (81%), Gaps = 24/622 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSG---------- 289
MKESQ+++++TIRWD+GLN+KR+A+F PK E E+RL GDEL+L+++G
Sbjct: 281 MKESQTENDITIRWDMGLNQKRLAWFCMPKLESGEVRLAVGDELKLKFAGTTSSVGIKGL 340
Query: 290 ---------DAAHPAWQSVGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKST 338
+ W+ VG V+K+ A +E+ LELR + GVP D HGFSVDF+WKST
Sbjct: 341 QAFNKAGWGSSGDAVWEGVGSVVKIPNNASDEICLELRRNDGVPFDCTHGFSVDFIWKST 400
Query: 339 SFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFA 398
SFDRMQ AMKTFA+DE SVSGYIYH LLGHEVE Q++R +P+RF AP LPELN SQ+ A
Sbjct: 401 SFDRMQAAMKTFAIDEKSVSGYIYHKLLGHEVEPQVLRTQMPKRFAAPNLPELNHSQMSA 460
Query: 399 VKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATG 458
VK+VLQ+P+SLIQGPPGTGKTVTSA+IVYH+AK GQVLVCAPSNVAVD L EKI TG
Sbjct: 461 VKAVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDHLCEKIHQTG 520
Query: 459 LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK 518
LKVVRL AKSREA+ S V+ L+LH QV + DT EL KL QL+++QGELS SDE+KYK
Sbjct: 521 LKVVRLAAKSREALDSSVDFLSLHSQVANADTHH--ELQKLIQLRNDQGELSQSDERKYK 578
Query: 519 ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
AL +A E++I +ADVIC TCVGAGDPRLA F+FR VLIDE+TQ+ EPEC+IPLV+G KQ
Sbjct: 579 ALVKACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQ 638
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSF 638
VLVGDH QLGPVIM KKAARAGL+QSLFERLV+LG PIRLQVQYRMHP LSEF SN F
Sbjct: 639 AVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNHPIRLQVQYRMHPCLSEFSSNLF 698
Query: 639 YEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKI 698
YEGTLQNGVT ER +DFPWPV + PMFF+ +G EEIS+SGTS+LNRTEA+NVEK+
Sbjct: 699 YEGTLQNGVTAPERLRKHVDFPWPVADTPMFFHQNLGTEEISSSGTSFLNRTEASNVEKM 758
Query: 699 VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
VT F +SGV+P+QIGVITPYEGQR+YI +YM +G+L++ LYKE+EVASVD+FQGREKDY
Sbjct: 759 VTKFFKSGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDY 818
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IILSCVRSNEHQGIGFLNDPRRLNVALTRA+YG+VILGNPKVLSK PLW LL+HYKE
Sbjct: 819 IILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKG 878
Query: 819 CLVEGPLNNLKQSMVQFQKPKK 840
C VEGPL+NL+ SMVQF +PKK
Sbjct: 879 CFVEGPLSNLQPSMVQFSRPKK 900
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 121/185 (65%), Gaps = 19/185 (10%)
Query: 99 SKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVR 158
S+ G N T++ G + ++ +++E +G+ EHAC YCG+ NP CVV+
Sbjct: 42 SQLGDLNLGETTSGHAAAGQ--VYIDDFDEEIERNSFGEG--VEHACSYCGIHNPQCVVK 97
Query: 159 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 218
C C KWFCNSRGNTS SHIVNHLV+AKHKEV LHK+S LG+TI ECYNCG +NVF+L
Sbjct: 98 C--LHCNKWFCNSRGNTSASHIVNHLVKAKHKEVILHKESALGDTIPECYNCGSKNVFML 155
Query: 219 GFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD------IGLNKKRVAYFV-FPKE 271
GFI AK+++VVVLLCR+PC + + S+D I WD I +++ +++ V P E
Sbjct: 156 GFIPAKSDTVVVLLCRQPCAAL---TSSRD---INWDTSQWSAIIDDRQFLSWLVKVPSE 209
Query: 272 DNELR 276
+LR
Sbjct: 210 AEQLR 214
>gi|58264876|ref|XP_569594.1| ATP dependent helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225826|gb|AAW42287.1| ATP dependent helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1090
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/622 (68%), Positives = 506/622 (81%), Gaps = 24/622 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSG---------- 289
MKESQ+++++TIRWD+GLN+KR+A+F PK E E+RL GDEL+L+++G
Sbjct: 281 MKESQTENDITIRWDMGLNQKRLAWFCMPKLESGEVRLAVGDELKLKFAGTTSSVGIKGL 340
Query: 290 ---------DAAHPAWQSVGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKST 338
+ W+ VG V+K+ A +E+ LELR + GVP D HGFSVDF+WKST
Sbjct: 341 QAFNKAGWGSSGDAVWEGVGSVVKIPNNASDEICLELRRNDGVPFDCTHGFSVDFIWKST 400
Query: 339 SFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFA 398
SFDRMQ AMKTFA+DE SVSGYIYH LLGHEVE Q++R +P+RF AP LPELN SQ+ A
Sbjct: 401 SFDRMQAAMKTFAIDEKSVSGYIYHKLLGHEVEPQVLRTQMPKRFAAPNLPELNHSQMSA 460
Query: 399 VKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATG 458
VK+VLQ+P+SLIQGPPGTGKTVTSA+IVYH+AK GQVLVCAPSNVAVD L EKI TG
Sbjct: 461 VKAVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDHLCEKIHQTG 520
Query: 459 LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK 518
LKVVRL AKSREA+ S V+ L+LH QV + DT EL KL QL+++QGELS SDE+KYK
Sbjct: 521 LKVVRLAAKSREALDSSVDFLSLHSQVANADTHH--ELQKLIQLRNDQGELSQSDERKYK 578
Query: 519 ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
AL +A E++I +ADVIC TCVGAGDPRLA F+FR VLIDE+TQ+ EPEC+IPLV+G KQ
Sbjct: 579 ALVKACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQ 638
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSF 638
VLVGDH QLGPVIM KKAARAGL+QSLFERLV+LG PIRLQVQYRMHP LSEF SN F
Sbjct: 639 AVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNHPIRLQVQYRMHPCLSEFSSNLF 698
Query: 639 YEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKI 698
YEGTLQNGVT ER +DFPWPV + PMFF+ +G EEIS+SGTS+LNRTEA+NVEK+
Sbjct: 699 YEGTLQNGVTAPERLRKHVDFPWPVADTPMFFHQNLGTEEISSSGTSFLNRTEASNVEKM 758
Query: 699 VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
VT F +SGV+P+QIGVITPYEGQR+YI +YM +G+L++ LYKE+EVASVD+FQGREKDY
Sbjct: 759 VTKFFKSGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDY 818
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IILSCVRSNEHQGIGFLNDPRRLNVALTRA+YG+VILGNPKVLSK PLW LL+HYKE
Sbjct: 819 IILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKG 878
Query: 819 CLVEGPLNNLKQSMVQFQKPKK 840
C VEGPL+NL+ SMVQF +PKK
Sbjct: 879 CFVEGPLSNLQPSMVQFSRPKK 900
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 121/185 (65%), Gaps = 19/185 (10%)
Query: 99 SKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVR 158
S+ G N T++ G + ++ +++E +G+ EHAC YCG+ NP CVV+
Sbjct: 42 SQLGDLNLGETTSGHAAAGQ--VYIDDFDEEIERNSFGEG--VEHACSYCGIHNPQCVVK 97
Query: 159 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 218
C C KWFCNSRGNTS SHIVNHLV+AKHKEV LHK+S LG+TI ECYNCG +NVF+L
Sbjct: 98 C--LHCNKWFCNSRGNTSASHIVNHLVKAKHKEVILHKESALGDTIPECYNCGSKNVFML 155
Query: 219 GFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD------IGLNKKRVAYFV-FPKE 271
GFI AK+++VVVLLCR+PC + + S+D I WD I +++ +++ V P E
Sbjct: 156 GFIPAKSDTVVVLLCRQPCAAL---TSSRD---INWDTSQWSAIIDDRQFLSWLVKVPSE 209
Query: 272 DNELR 276
+LR
Sbjct: 210 AEQLR 214
>gi|388852346|emb|CCF53961.1| probable NAM7-nonsense-mediated mRNA decay protein [Ustilago
hordei]
Length = 1091
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/603 (71%), Positives = 502/603 (83%), Gaps = 6/603 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++ ++ +RWD GLN+K++A+ + PK E E+RL GDEL+LRY G+ A P WQ V
Sbjct: 331 LKESQTQQDLVVRWDQGLNQKKIAWMMLPKLESGEVRLAVGDELKLRYRGEIA-PPWQGV 389
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +EVALEL+ S GVP H F DFVWK+TSFDRMQ AMKTFAVDE S+
Sbjct: 390 GHVIKIPNNVSDEVALELKRSDGVPDHCTHNFFADFVWKATSFDRMQSAMKTFAVDEQSL 449
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGHE+E +R T+P+RF APGLPELN SQV AVKSVLQ+P+SLIQGPPGTG
Sbjct: 450 SGYIYHKLLGHEIESATLRTTMPKRFSAPGLPELNHSQVNAVKSVLQKPLSLIQGPPGTG 509
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVY ++K G VLVCAPSNVAVDQL EKI TGLKVVRL AKSREA+ SP+
Sbjct: 510 KTVTSATIVYQLSKMNPGAVLVCAPSNVAVDQLCEKIHLTGLKVVRLSAKSREALDSPIS 569
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV + DT EL KL QLK+EQGELSSSDE+KYKAL RA E+EI +ADVICC
Sbjct: 570 FLTLHEQVANNDT--HIELQKLIQLKNEQGELSSSDERKYKALTRACEKEILSTADVICC 627
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVG GDPRL+ +FR VL+DE+TQA EPE +IPLV+G KQVV VGDH QLGPVIM KKA
Sbjct: 628 TCVGCGDPRLSKIKFRTVLVDEATQAAEPEVMIPLVMGCKQVVFVGDHLQLGPVIMNKKA 687
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL+QSLFERL++LG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT ER +
Sbjct: 688 ARAGLSQSLFERLIMLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRREV 747
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPVP PMFF+ +GQEEIS+SGTS+LNRTEA+NVEKIVT F ++GV PSQIG++TP
Sbjct: 748 DFPWPVPWLPMFFFQNLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVKPSQIGIVTP 807
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVN+M +G+L+++LYK++EVASVD+FQGREKDYIILSCVRSNEHQGIGFL+D
Sbjct: 808 YEGQRSYIVNHMQLHGSLKKELYKQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSD 867
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRARYG+VILGNPKVL+K PLW+ LL HYKE CLVEG L+NL+ SM+QF K
Sbjct: 868 PRRLNVALTRARYGLVILGNPKVLNKHPLWHYLLVHYKEKGCLVEGVLSNLQASMIQFPK 927
Query: 838 PKK 840
P++
Sbjct: 928 PRR 930
Score = 179 bits (455), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 127/214 (59%), Gaps = 28/214 (13%)
Query: 70 SRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDD 129
SRS A H H+H HS AA+ S GA I + LSF+
Sbjct: 78 SRSHAHAHLHGAPHSHFSHSSFEAASPSLPAHGA-----PLLDSIPDDSDLLSFQ----- 127
Query: 130 VEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 189
+ EHAC YCG+ NP+CVV+C + C KWFCNSRG+TSGSHIVNHLVRAKH
Sbjct: 128 ---------NLPEHACAYCGIFNPSCVVKCLI--CNKWFCNSRGSTSGSHIVNHLVRAKH 176
Query: 190 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDN 249
KEV LH DSPLGET+ ECYNCG +NVFLLGFI AK+E+VVVLLCR+PC M S SKD
Sbjct: 177 KEVSLHADSPLGETMPECYNCGVKNVFLLGFIPAKSETVVVLLCRQPCAAM---SNSKDV 233
Query: 250 V--TIRWDIGLNKKRVAYFV--FPKEDNELRLVP 279
+ T +W + + ++ P E +LR P
Sbjct: 234 IWDTTQWSPLIQDRCFLTWLVKVPTEHEQLRARP 267
>gi|321253648|ref|XP_003192804.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
gi|317459273|gb|ADV21017.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
Length = 1097
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/622 (68%), Positives = 506/622 (81%), Gaps = 24/622 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSG---------- 289
MKESQ+++++TIRWD+GLN+KR+A+F PK E E+RL GDEL+L+++G
Sbjct: 281 MKESQTENDITIRWDMGLNQKRLAWFCMPKLESGEVRLAVGDELKLKFAGTTNSVGIKGL 340
Query: 290 ---------DAAHPAWQSVGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKST 338
+ W+ VG V+K+ A +E+ LELR + GVP D HGFSVDF+WKST
Sbjct: 341 QAFNKGGWGSSGDAVWEGVGSVVKIPNNASDEICLELRRNDGVPFDCTHGFSVDFIWKST 400
Query: 339 SFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFA 398
SFDRMQ AMKTFA+DE SVSGYIYH LLGHEVE Q++R +P+RF AP LPELN SQ+ A
Sbjct: 401 SFDRMQAAMKTFAIDEKSVSGYIYHKLLGHEVEPQVLRTQMPKRFAAPNLPELNHSQMSA 460
Query: 399 VKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATG 458
VK+VLQ+P+SLIQGPPGTGKTVTSA+IVYH+AK GQVLVCAPSNVAVD L EKI TG
Sbjct: 461 VKAVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDHLCEKIHQTG 520
Query: 459 LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK 518
LKVVRL AKSREA+ S V+ L+LH QV + DT EL KL QL+++QGELS SDE+KYK
Sbjct: 521 LKVVRLAAKSREALDSSVDFLSLHSQVANADTHH--ELQKLIQLRNDQGELSQSDERKYK 578
Query: 519 ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
AL RA E++I +ADVIC TCVGAGDPRLA F+FR VLIDE+TQ+ EPEC+IPLV+G KQ
Sbjct: 579 ALVRACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQ 638
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSF 638
VLVGDH QLGPVIM KKAARAGL+QSLFERLV+LG PIRLQVQYRMHP LSEF SN F
Sbjct: 639 AVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNHPIRLQVQYRMHPCLSEFSSNLF 698
Query: 639 YEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKI 698
YEGTLQNGVT ER +DFPWPV + PMFF+ +G EEIS+SGTS+LNRTEA+NVEK+
Sbjct: 699 YEGTLQNGVTAPERLRKNVDFPWPVADTPMFFHQNLGTEEISSSGTSFLNRTEASNVEKM 758
Query: 699 VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
VT F +SGV+P+QIGVITPYEGQR+YI +YM +G+L++ LYKE+EVASVD+FQGREKDY
Sbjct: 759 VTKFFKSGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDY 818
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IILSCVRSNEHQGIGFLNDPRR+NVALTRA+YG+VILGNPKVLSK PLW LL+HYKE
Sbjct: 819 IILSCVRSNEHQGIGFLNDPRRMNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKG 878
Query: 819 CLVEGPLNNLKQSMVQFQKPKK 840
C VEGPL+NL+ SMVQF +PKK
Sbjct: 879 CFVEGPLSNLQPSMVQFSRPKK 900
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 112/161 (69%), Gaps = 17/161 (10%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
++ +++E +G+ EHAC YCG+ NP CVV+C C KWFCNSRGNTS SHIVN
Sbjct: 64 IDDFDEEIERNSFGEG--VEHACSYCGIHNPQCVVKC--LHCNKWFCNSRGNTSASHIVN 119
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV+AKHKEV LHK+S LG+TI ECYNCG +NVF+LGFI AK+++VVVLLCR+PC +
Sbjct: 120 HLVKAKHKEVILHKESALGDTIPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAAL-- 177
Query: 243 ESQSKDNVTIRWD------IGLNKKRVAYFV-FPKEDNELR 276
+ S+D I WD I +++ +++ V P E +LR
Sbjct: 178 -TSSRD---INWDTSQWSAIIDDRQFLSWLVKVPSEAEQLR 214
>gi|405123238|gb|AFR98003.1| ATP dependent helicase [Cryptococcus neoformans var. grubii H99]
Length = 1092
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/622 (68%), Positives = 505/622 (81%), Gaps = 24/622 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSG---------- 289
MKESQ+++++TIRWD+GLN+KR+A+F PK E E+RL GDEL+L+++G
Sbjct: 281 MKESQTENDITIRWDMGLNQKRLAWFCMPKLESGEVRLAVGDELKLKFAGTTSSVGIKGL 340
Query: 290 ---------DAAHPAWQSVGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKST 338
+ W+ VG V+K+ A +E+ LELR + GVP D HGFSVDF+WKST
Sbjct: 341 QAFNKAGWGSSGDAVWEGVGSVVKIPNNASDEICLELRRNDGVPFDCTHGFSVDFIWKST 400
Query: 339 SFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFA 398
SFDRMQ AMKTFA+DE SVSGYIYH LLGHEVE Q++R +P+RF AP LPELN SQ+ A
Sbjct: 401 SFDRMQAAMKTFAIDEKSVSGYIYHKLLGHEVEPQVLRTQMPKRFAAPNLPELNHSQMSA 460
Query: 399 VKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATG 458
VK+VLQ+P+SLIQGPPGTGKTVTSA+IVYH+AK GQVLVCAPSNVAVD L EKI TG
Sbjct: 461 VKAVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDHLCEKIHQTG 520
Query: 459 LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK 518
LKVVRL AKSREA+ S V+ L+LH QV + DT EL KL QL+++QGELS SDE+KYK
Sbjct: 521 LKVVRLAAKSREALDSSVDFLSLHSQVANADTHH--ELQKLIQLRNDQGELSQSDERKYK 578
Query: 519 ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
L +A E++I +ADVIC TCVGAGDPRLA F+FR VLIDE+TQ+ EPEC+IPLV+G KQ
Sbjct: 579 TLVKACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQ 638
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSF 638
VLVGDH QLGPVIM KKAARAGL+QSLFERLV+LG PIRLQVQYRMHP LSEF SN F
Sbjct: 639 AVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNHPIRLQVQYRMHPCLSEFSSNLF 698
Query: 639 YEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKI 698
YEGTLQNGVT ER +DFPWPV + PMFF+ +G EEIS+SGTS+LNRTEA+NVEK+
Sbjct: 699 YEGTLQNGVTAPERLRKNVDFPWPVADTPMFFHQNLGTEEISSSGTSFLNRTEASNVEKM 758
Query: 699 VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
VT F +SGV+P+QIGVITPYEGQR+YI +YM +G+L++ LYKE+EVASVD+FQGREKDY
Sbjct: 759 VTKFFKSGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDY 818
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IILSCVRSNEHQGIGFLNDPRRLNVALTRA+YG+VILGNPKVLSK PLW LL+HYKE
Sbjct: 819 IILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKG 878
Query: 819 CLVEGPLNNLKQSMVQFQKPKK 840
C VEGPL+NL+ SMVQF +PKK
Sbjct: 879 CFVEGPLSNLQPSMVQFSRPKK 900
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 121/185 (65%), Gaps = 19/185 (10%)
Query: 99 SKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVR 158
S+ G N T++ G + ++ +++E +G+ EHAC YCG+ NP CVV+
Sbjct: 42 SQLGDLNLGETTSGHAAAGQGYI--DDFDEEIERNSFGEG--VEHACSYCGIHNPQCVVK 97
Query: 159 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 218
C C KWFCNSRGNTS SHIVNHLV+AKHKEV LHK+S LG+TI ECYNCG +NVF+L
Sbjct: 98 C--LHCNKWFCNSRGNTSASHIVNHLVKAKHKEVILHKESALGDTIPECYNCGSKNVFML 155
Query: 219 GFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD------IGLNKKRVAYFV-FPKE 271
GFI AK+++VVVLLCR+PC + + S+D I WD I +++ +++ V P E
Sbjct: 156 GFIPAKSDTVVVLLCRQPCAAL---TSSRD---INWDTSQWSAIIDDRQFLSWLVKVPSE 209
Query: 272 DNELR 276
+LR
Sbjct: 210 AEQLR 214
>gi|18202669|sp|Q98TR3.1|RENT1_FUGRU RecName: Full=Putative regulator of nonsense transcripts 1;
AltName: Full=ATP-dependent helicase RENT1
gi|13161880|emb|CAC33025.1| hypothetical protein [Takifugu rubripes]
Length = 1097
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/708 (61%), Positives = 541/708 (76%), Gaps = 34/708 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 302 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 360
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ + +E+A+ELR S G PV+I H + VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 361 HVIKVPDSYGDEIAIELRTSVGAPVEIPHNYQVDFVWKSTSFDRMQSALKTFAVDETSVS 420
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE ++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 421 GYIYHKLLGHEVEDVTIKCQLPKRFTANGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 480
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+++QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 481 TVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSF 540
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+ ++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVI CT
Sbjct: 541 LALHNQISNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVIWCT 598
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CV AGDPRLA +FR +LIDESTQATEP+C+ P+ LGAKQ++L G+ +MCKKAA
Sbjct: 599 CVRAGDPRLAKMQFRSILIDESTQATEPKCIGPVELGAKQLIL-GEITASWSCVMCKKAA 657
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 658 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFD 717
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P +PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 718 FQWPQPEKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPY 777
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY ++E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 778 EGQRSYLVQYMQFSGSLHTKLY-QVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 836
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 837 RRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKP 896
Query: 839 KKIYND------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNG------T 886
+K+ N + A ++P ++ ++ G + Y G +
Sbjct: 897 RKLVNTINPRFMSTAMYDAREALIP---GSAYDRSNTGGRPSNMYFQTHDQIGMIGAAAS 953
Query: 887 HKPGLH---PAGFPMPRVPLPPFQG---GPPSQPYAIPSRGAVHGPVG 928
H L+ P MP +P P +QG GP + RGA+ G G
Sbjct: 954 HLAALNIPIPFNLVMPPMPPPSYQGQTNGPAA------GRGAMKGKSG 995
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 115/182 (63%), Gaps = 16/182 (8%)
Query: 75 PASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFE 134
P+ H + + L G + S SQ+ +A L+FEE +D
Sbjct: 41 PSQTQTQGHTQSQLDNQLNGPDDGLHNGGMDDSVAKASQL---LAELNFEEDEEDT---- 93
Query: 135 YGKADFTEHACR-YCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVC 193
Y D HACR YCG+ +PACVV CN + +KWFCN RGNTSGSHIVNHLVRAK KEV
Sbjct: 94 YYTKDLPVHACRSYCGIHDPACVVYCN--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVT 151
Query: 194 LHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIR 253
LHKD PLGET+LECYNCGCRNVFLLGFI AK +SVVVLLCR+PC + +S KD I
Sbjct: 152 LHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCAS---QSSLKD---IN 205
Query: 254 WD 255
WD
Sbjct: 206 WD 207
>gi|355767117|gb|EHH62580.1| hypothetical protein EGM_20966 [Macaca fascicularis]
Length = 1041
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/815 (55%), Positives = 568/815 (69%), Gaps = 71/815 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNEL------------RLVPGDELRLRYS 288
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+ + +L+ ++ L +
Sbjct: 245 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGVERVMSHTHPVPDKLILNTKVSLAFD 304
Query: 289 GDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMK 348
DA G +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+K
Sbjct: 305 KDANLTQHTDYG--------DEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALK 356
Query: 349 TFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPIS 408
TFAVDETSVSGYIYH LLGHEVE +++ LP+RF + + + S RP+S
Sbjct: 357 TFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTV-----FFSRRRASPTSTTPRPLS 411
Query: 409 LIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKS 468
LIQGPPGTGKTVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKS
Sbjct: 412 LIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKS 471
Query: 469 REAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREI 528
REA+ SPV L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+
Sbjct: 472 REAIDSPVSFLALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAEREL 529
Query: 529 SQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQL 588
+ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQL
Sbjct: 530 LMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQL 589
Query: 589 GPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVT 648
GPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT
Sbjct: 590 GPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVT 649
Query: 649 INERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVV 708
+R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G
Sbjct: 650 AADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAK 709
Query: 709 PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE 768
P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NE
Sbjct: 710 PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANE 769
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL 828
HQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL
Sbjct: 770 HQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNL 829
Query: 829 KQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPP 880
++S++QF KP+K+ N + A I+P + + +G + Y
Sbjct: 830 RESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQT 885
Query: 881 GPPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG--- 937
G G P+ +P+P PP +PPPG
Sbjct: 886 HDQIGMISAG--PSHVAAMNIPIPFNLVMPP---------------------MPPPGYFG 922
Query: 938 -SRGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGF 996
+ G AGRG+ G + + P + + N + ++ SQP G LTQ G+
Sbjct: 923 QANGPAAGRGTPKGKTGRGARQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GY 981
Query: 997 VNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
++ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 982 IS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 1013
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 86/156 (55%), Gaps = 45/156 (28%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC
Sbjct: 22 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPIHAC-------------- 60
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
SHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 61 ------------------SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 102
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 103 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 132
>gi|321463387|gb|EFX74403.1| hypothetical protein DAPPUDRAFT_57163 [Daphnia pulex]
Length = 1129
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/820 (56%), Positives = 567/820 (69%), Gaps = 49/820 (5%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KE+Q++DNV +RWD+GLNKK VAYF K D++++L+ GDELRLRY G+ H W +G
Sbjct: 300 VKEAQTQDNVHVRWDVGLNKKTVAYFSLQKTDSDMKLMHGDELRLRYLGEL-HKPWTGLG 358
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIKL EEV +EL+ S G P + + F VDFVWKSTSFDRMQ A++ FAVDE+SVS
Sbjct: 359 HVIKLPDNYSEEVGIELKNSNGAPTECSTNFVVDFVWKSTSFDRMQSALRKFAVDESSVS 418
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE + R LP+ F AP LPELN SQVFAVK +QRP++LIQGPPGTGK
Sbjct: 419 AYIYHRLLGHEVEDIVFRLHLPKHFSAPDLPELNRSQVFAVKQAVQRPLTLIQGPPGTGK 478
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+AK G G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 479 TVTSATIVYHLAKLGSGPVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDSPVSF 538
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH QVR L+ + SEL KL QLK+E GELS DEK+Y+ LKR ERE+ ++ADV+ CT
Sbjct: 539 LALHNQVRCLEGA--SELRKLVQLKEEVGELSQGDEKRYRMLKRQAERELLEAADVLACT 596
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGD RLA +F +LIDES QATEPEC++P+VLGA+Q++LVGDHCQLGPV+MCK AA
Sbjct: 597 CVGAGDVRLARIKFASILIDESMQATEPECMVPVVLGARQLILVGDHCQLGPVVMCKPAA 656
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++P RL+VQYRMHP LSEFPSN FYEG+LQNGV +R G+D
Sbjct: 657 KAGLSQSLFERLVVLGIRPFRLEVQYRMHPRLSEFPSNFFYEGSLQNGVCAEDRILRGVD 716
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP+P+RPMFFYV +GQEEI+ SGTSYLNRTEA+NVEKI T FLRSGV P QIG+ITPY
Sbjct: 717 FPWPMPDRPMFFYVTLGQEEIAGSGTSYLNRTEASNVEKIATRFLRSGVKPEQIGIITPY 776
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM G+L +LY++IE+ASVD+FQGREKD II+SCVRSNE+QGIGFLNDP
Sbjct: 777 EGQRAYLVQYMQHQGSLHAKLYQDIEIASVDAFQGREKDLIIMSCVRSNENQGIGFLNDP 836
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVA+TRARYGI+I+GNPKVL+KQP+WN LL YKE+ L EG LNNLK+SM+QF KP
Sbjct: 837 RRLNVAMTRARYGIIIVGNPKVLAKQPVWNHLLHFYKENHVLTEGALNNLKESMMQFPKP 896
Query: 839 KKIYND--------RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
KK N + A +VP + DR G+ PPN
Sbjct: 897 KKPINSFNPGQHFMSTAVYDARQAMVPGSV------YDRSGASQ-------PPNNNGMNT 943
Query: 891 LHP-----AGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGR 945
P G P R+ P P A+ + G + HVPP R G +
Sbjct: 944 YIPRATANVGDPYSRLHDPIGYIAPERAQAALSAMPVPLGVFMNMTHVPP---RFHGQQQ 1000
Query: 946 GSAGAPIGSHLQHQQNTQ------QPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNN 999
S+ + + N + + GS+ F + N+Q P +Q G
Sbjct: 1001 QGMHGSSKSNQRPKDNARGSGPRAGKTASKGSSSLFTQSLSQNTQDVSTQPFSQGGMALT 1060
Query: 1000 MPV-QGPSQTF-------RDGFSVGSMSQD-FLGDDFKSQ 1030
+ QG SQT + G S SQD ++ D++SQ
Sbjct: 1061 QGMSQGMSQTVSGFGALSQSGLSQLDPSQDAYMSSDYQSQ 1100
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 121/182 (66%), Gaps = 22/182 (12%)
Query: 105 NSSNTSTSQIVEGMAGLS---FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNV 161
N +T SQ+ M L+ FEE +D EG+ Y K D HAC+YCG+ +P CVV CN+
Sbjct: 64 NGLDTIDSQLATAMKNLNDLQFEE--EDEEGY-YSK-DLPPHACKYCGIHDPGCVVMCNI 119
Query: 162 PSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFI 221
C+KWFCN +GNTSGSHIVNHLVRAKHKEV LH+D PLGET+LECY+CG RNVF+LGFI
Sbjct: 120 --CKKWFCNGKGNTSGSHIVNHLVRAKHKEVTLHRDGPLGETVLECYSCGVRNVFVLGFI 177
Query: 222 SAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVF-------PKEDNE 274
AK +SVVVLLCR+PC +S KD + WDI K +A F P E +
Sbjct: 178 PAKADSVVVLLCRQPC---AAQSSLKD---MNWDIEQWKPLIADRCFLSWLVRSPSEAEQ 231
Query: 275 LR 276
+R
Sbjct: 232 MR 233
>gi|323507767|emb|CBQ67638.1| probable NAM7-nonsense-mediated mRNA decay protein [Sporisorium
reilianum SRZ2]
Length = 1094
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/702 (63%), Positives = 532/702 (75%), Gaps = 28/702 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++ ++ IRWD GLN+K++A+ PK E E+RL GDEL+LRY G+ A P W+ V
Sbjct: 327 LKESQTQQDLVIRWDQGLNQKKIAFMTLPKLESGEVRLAVGDELKLRYRGELA-PPWEGV 385
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +EVALEL+ + GVP H F DFVWK+TSFDRMQ AMKTFAVDE S+
Sbjct: 386 GHVIKIPNNLSDEVALELKRADGVPDHCTHNFFADFVWKATSFDRMQSAMKTFAVDEQSL 445
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
S YIYH LLGHE+E +R T+P+RF APGLPELN SQV AVKSVLQ+P+SLIQGPPGTG
Sbjct: 446 SAYIYHKLLGHEIENSTLRTTMPKRFSAPGLPELNHSQVNAVKSVLQKPLSLIQGPPGTG 505
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA+IVY ++K G VLVCAPSNVAVDQL EKI TGLKVVRL AKSREA+ SP+
Sbjct: 506 KTVTSASIVYQLSKMNPGPVLVCAPSNVAVDQLTEKIHMTGLKVVRLTAKSREALDSPIS 565
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV + DT+ EL KL QLK+EQGELSSSDE+K KAL RA E+EI +ADVICC
Sbjct: 566 FLTLHEQVANNDTN--IELQKLIQLKNEQGELSSSDERKCKALIRACEKEILSTADVICC 623
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVG GDPRLA +FR VL+DE+TQA EPEC+IPLV+G KQVV VGDH QLGPVIM KK
Sbjct: 624 TCVGCGDPRLAKIKFRTVLVDEATQAAEPECMIPLVMGCKQVVFVGDHLQLGPVIMNKKV 683
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAG +QSLFERL++LG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT ER +
Sbjct: 684 ARAGASQSLFERLIMLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDV 743
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPVP+ PM F+ +GQEEIS+SGTS+LNRTEA+NVEKIVT F ++GV PSQIG++TP
Sbjct: 744 DFPWPVPSLPMLFFQNLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVKPSQIGIVTP 803
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVN+M +G+L+++LYKE+EVASVD+FQGREKDYIILSCVRSNEHQGIGFL+D
Sbjct: 804 YEGQRSYIVNHMQLHGSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSD 863
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRARYG+VILGNPKVL+K PLW+ LL HYKE CLVEG L+NL+ SM+QF K
Sbjct: 864 PRRLNVALTRARYGLVILGNPKVLNKHPLWHYLLVHYKEKGCLVEGVLSNLQPSMMQFPK 923
Query: 838 PKKIYNDRRLFFGAGPGIVPNDISTSNPN-----ADRRGSRARGYMPPGPPNG-THKPGL 891
P++ P P+D+ + + D G+ G + G G +++ G
Sbjct: 924 PRR------------PLQKPDDLMARHRHDLAGGVDGYGASRGGRLADGGSKGESNELGF 971
Query: 892 HPAGFPMPRVPLPPFQ----GGPPSQPYAIPSRGAVHGPVGA 929
PM +P G + P A S G HGP +
Sbjct: 972 FRTHDPMSYIPSDAQSVTSLGTQATYPSAHSSVGGAHGPYAS 1013
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 104/145 (71%), Gaps = 9/145 (6%)
Query: 139 DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDS 198
D EHAC YCG+ NP+CVV+C + C KWFCNSRG+TSGSHIVNHLVRAKHKEVCLH +S
Sbjct: 124 DLPEHACAYCGIFNPSCVVKCLI--CNKWFCNSRGSTSGSHIVNHLVRAKHKEVCLHAES 181
Query: 199 PLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNV--TIRWDI 256
PLGET ECYNCG +N FLLGFI AK+E+VVVLLCR+PC M S SKD + T +W
Sbjct: 182 PLGETTPECYNCGAKNAFLLGFIPAKSETVVVLLCRQPCAAM---SNSKDIIWDTTQWSP 238
Query: 257 GLNKKRVAYFV--FPKEDNELRLVP 279
+ + ++ P E +LR P
Sbjct: 239 LIEDRCFLTWLVKVPSEHEQLRARP 263
>gi|242011006|ref|XP_002426248.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
gi|212510311|gb|EEB13510.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
Length = 1108
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/613 (67%), Positives = 502/613 (81%), Gaps = 13/613 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKED-------NELRLVPGDELRLRYSGDAAH 293
+KESQ++DNV +RWD+GLNKK +AYF K+D ++L+ GDELRLRY G+ H
Sbjct: 305 LKESQTQDNVEVRWDVGLNKKTIAYFTLAKQDGGKFILSKNMKLMHGDELRLRYLGEL-H 363
Query: 294 PAWQSVGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFA 351
W VGHVIK+ EE+ +EL++ G P + F VDFVWKSTSFDRMQ ++ FA
Sbjct: 364 KQWSGVGHVIKVPDNYGEEIGIELKSGAGAPTECTSNFVVDFVWKSTSFDRMQLGLRKFA 423
Query: 352 VDETSVSGYIYHHLLGHEVE-VQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLI 410
VD++SVSGYIYH LLGH+ E V + R +P+ F AP LP+LN SQV+AVK LQRP+SLI
Sbjct: 424 VDDSSVSGYIYHRLLGHDYEEVLLSRVQIPKHFSAPNLPDLNRSQVYAVKQALQRPLSLI 483
Query: 411 QGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSRE 470
QGPPGTGKTVTSA IVYH+A+Q G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSRE
Sbjct: 484 QGPPGTGKTVTSATIVYHLARQPTGAVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSRE 543
Query: 471 AVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQ 530
A+ SPV L LH Q+R++D++ ++L KLQQLKDE GELSSSDEK+Y+ LK+++E+E+ +
Sbjct: 544 AIDSPVSFLALHNQIRNMDSN--TDLKKLQQLKDETGELSSSDEKRYRMLKKSSEKEMLE 601
Query: 531 SADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGP 590
+ADVICCTCVGAGDPRLA +F +LIDES Q+TEPEC++P+VLGA+Q++LVGDHCQLGP
Sbjct: 602 AADVICCTCVGAGDPRLARLKFHSILIDESMQSTEPECMVPVVLGARQLILVGDHCQLGP 661
Query: 591 VIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTIN 650
V+MCKKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPS+ FYEG+LQNGV
Sbjct: 662 VVMCKKAARAGLSQSLFERLVVLGIRPYRLEVQYRMHPELSRFPSDFFYEGSLQNGVCSE 721
Query: 651 ERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS 710
ER+ + +DFPWP ++PM FYV GQEEI+ SGTSYLNRTEA+NVEKIVT FLR+G+ P
Sbjct: 722 ERKLAKVDFPWPANDKPMLFYVTTGQEEIAGSGTSYLNRTEASNVEKIVTKFLRAGIKPE 781
Query: 711 QIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
QIG+ITPYEGQRAY+V +M G+L +LY+EIEVASVD+FQGREKD II+SCVRSNE
Sbjct: 782 QIGLITPYEGQRAYLVQFMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNELL 841
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
GIGFLNDPRRLNVALTRA+YGI+I+GNPKVLSKQPLWN LL YKE + LVEGPLNNLK+
Sbjct: 842 GIGFLNDPRRLNVALTRAKYGIIIIGNPKVLSKQPLWNHLLNFYKEQKVLVEGPLNNLKE 901
Query: 831 SMVQFQKPKKIYN 843
S +QF KPKK+ N
Sbjct: 902 SAIQFAKPKKLVN 914
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 99/140 (70%), Gaps = 10/140 (7%)
Query: 98 PSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVV 157
PS G +N N+ T+ + L FEE E Y + AC+YCG+ +P CVV
Sbjct: 69 PSVIGIDNGVNSVTN----ALGDLQFEEE----EEEGYYNKELPAFACKYCGIHDPNCVV 120
Query: 158 RCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFL 217
CNV C+KWFCN RG+TSGSHI+NHLVRAKHKEV LHKD PLGET+LECY CG RNVF+
Sbjct: 121 MCNV--CKKWFCNGRGSTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYACGVRNVFV 178
Query: 218 LGFISAKTESVVVLLCREPC 237
LGFI AK +SVVVLLCR+PC
Sbjct: 179 LGFIPAKADSVVVLLCRQPC 198
>gi|403178280|ref|XP_003336719.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164088|gb|EFP92300.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/604 (70%), Positives = 499/604 (82%), Gaps = 7/604 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KES ++++VT+RWD+GLN+KR+AYF PK E E+RL GDELRL+Y+G+ AW+
Sbjct: 327 LKESLTQNDVTVRWDMGLNQKRIAYFYLPKLESGEVRLAVGDELRLKYAGEL-QKAWEGP 385
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +EVALELR + GVP ++ FSVDFVWKSTSFDRMQ AMKTFAVD+ SV
Sbjct: 386 GHVIKVPNNQSDEVALELRRNDGVPHELTVNFSVDFVWKSTSFDRMQMAMKTFAVDDQSV 445
Query: 358 SGYIYHHLLGHEVEV-QMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
SGYIY LLGHE V Q++R +P+R AP LPELN SQV AVKSVLQ+P+SL+QGPPGT
Sbjct: 446 SGYIYRKLLGHETPVPQVLRTQMPKRVSAPNLPELNHSQVSAVKSVLQKPLSLVQGPPGT 505
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA++VYH++K GQVLVCAPSNVAVDQL EKI TGLKVVR+ AKSREA+ S V
Sbjct: 506 GKTVTSASVVYHLSKMNPGQVLVCAPSNVAVDQLTEKIHLTGLKVVRVQAKSREAIDSSV 565
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
++LTLH QV + DT +L KL QLK EQGELSS+DE++YK+L R EREI +ADVI
Sbjct: 566 QYLTLHQQVANNDT--HPDLQKLIQLKAEQGELSSTDERRYKSLTRLCEREILTNADVIL 623
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGDPRLA +FR VLIDE+TQATEPEC+IPL LG KQVV VGDH QLGP IM KK
Sbjct: 624 CTCVGAGDPRLAKMKFRTVLIDEATQATEPECMIPLTLGVKQVVFVGDHQQLGPTIMNKK 683
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AARAGL QS+FERLVLLG +PIRLQVQYRMHP LSEFPSN FYEG+LQNGVT ER
Sbjct: 684 AARAGLTQSMFERLVLLGNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKN 743
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
+DFPWP P PM F+ +GQEEIS+SGTS+LNRTEA+NVEK+VT F ++GV+PSQIG++T
Sbjct: 744 VDFPWPQPTTPMCFHCNLGQEEISSSGTSFLNRTEASNVEKVVTRFFKAGVLPSQIGIVT 803
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQR+YIV YM NG L++ LYK+IEVASVD+FQGREKDYIILSCVRSN+HQGIGFLN
Sbjct: 804 PYEGQRSYIVTYMQTNGTLKKDLYKDIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLN 863
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVALTRA+YG+V+LGNPKVLSK LW+ LLT YKE CLVEGPLNNL+ S+VQ
Sbjct: 864 DPRRLNVALTRAKYGVVVLGNPKVLSKHALWHFLLTAYKEKSCLVEGPLNNLQASLVQLS 923
Query: 837 KPKK 840
KP+K
Sbjct: 924 KPRK 927
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 110/177 (62%), Gaps = 27/177 (15%)
Query: 65 ATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFE 124
A P SR+ A+++ +++H HSDS SS + N + FE
Sbjct: 64 ANPEPSRNRHQANNNSSNYDHQSHSDSATEQSSKFNQAENEAD---------------FE 108
Query: 125 ETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRG----NTSGSHI 180
+ DD+ + HAC YCG+ +P+ VV+C + C KWFCNSRG +++GSHI
Sbjct: 109 DVLDDL------NRELPNHACAYCGIHSPSSVVKCLI--CSKWFCNSRGGPGAHSTGSHI 160
Query: 181 VNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
VNHLVRAKHKEV LH+D PLGET ECYNCG +NVF LGFI AK+++VVVLLCR+PC
Sbjct: 161 VNHLVRAKHKEVTLHEDGPLGETTPECYNCGSKNVFTLGFIPAKSDTVVVLLCRQPC 217
>gi|296423838|ref|XP_002841459.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637699|emb|CAZ85650.1| unnamed protein product [Tuber melanosporum]
Length = 1105
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/608 (70%), Positives = 493/608 (81%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+DN+ +RWD+GLN K +A FV PK E +++L GDE+RLRY G+ P W+ V
Sbjct: 282 LKESQSQDNLIVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLRYIGEL-RPHWEGV 340
Query: 300 GHVIKL--TAQEEVALELRASQG---VPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + G VP + H F D+VWK+TSFDRMQ AMK+FAVDE
Sbjct: 341 GYVIKIPNNQSDEVTLELRRNGGDKSVPTECTHAFCADYVWKATSFDRMQLAMKSFAVDE 400
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYIYH LLGH V ++ ++PRRF PGLPELN SQV AVKSVL +P+SLIQGPP
Sbjct: 401 MSVSGYIYHRLLGHAVAAAPLKTSMPRRFSVPGLPELNVSQVHAVKSVLSKPLSLIQGPP 460
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVYH+AK GQVLVCAPSNVAVDQL EKI TGLKVVRL AKSRE V S
Sbjct: 461 GTGKTVTSATIVYHLAKTNVGQVLVCAPSNVAVDQLTEKIHRTGLKVVRLTAKSREDVDS 520
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR DT+ EL KL QLK+E GELSS DEKK+K L R EREI +ADV
Sbjct: 521 PVSFLSLHEQVRLNDTN--VELVKLGQLKNELGELSSQDEKKFKHLTRNAEREILTNADV 578
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQA EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 579 ICCTCVGAGDPRLAKLKFRTVLIDESTQAAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 638
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAARAGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNGVT ER
Sbjct: 639 KKAARAGLHQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTTQERLR 698
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+ EKI+T F ++GV+PSQIG+
Sbjct: 699 RNVDFPWPVADTPMMFWSNLGNEEISASGTSYLNRTEASACEKIITRFFKAGVLPSQIGI 758
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NGALR++LYKEIEVASVD+FQGREKDYI+LSCVRSN+HQGIGF
Sbjct: 759 ITPYEGQRSYIVSSMQTNGALRKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGF 818
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA++G+VILGNPKVLSK PLW+ LL HYK+ CLVEGPL+NL+ S++Q
Sbjct: 819 LNDPRRLNVALTRAKFGVVILGNPKVLSKHPLWHYLLLHYKDKNCLVEGPLSNLQVSLIQ 878
Query: 835 FQKPKKIY 842
F KP++ Y
Sbjct: 879 FSKPRQSY 886
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 113/191 (59%), Gaps = 20/191 (10%)
Query: 65 ATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFE 124
A+ D+ S H + ++L+ S P R A N E GL
Sbjct: 16 ASTIDTASVYDLKARRHDDDEETVDETLSLASVPVGRSAIGDRNYG-----EETDGLGIN 70
Query: 125 ETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHL 184
++ D + + HAC YCG+ +P+CVV+C +C KWFC++RGNTS SHI+NHL
Sbjct: 71 DSRD-------AETELPAHACAYCGIHSPSCVVKC--LACNKWFCSARGNTSSSHIINHL 121
Query: 185 VRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKES 244
VRA+HKEV LH S LG+T LECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S
Sbjct: 122 VRARHKEVSLHPQSSLGDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAM---S 178
Query: 245 QSKDNVTIRWD 255
+KD + WD
Sbjct: 179 SNKD---MNWD 186
>gi|443896129|dbj|GAC73473.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1090
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/603 (69%), Positives = 502/603 (83%), Gaps = 6/603 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++ ++ +RWD GLN+KR+A+ + PK E E+RL GDEL+LRY G+ A P W+ V
Sbjct: 333 LKESQTQQDLVVRWDQGLNQKRIAWMMLPKLESGEVRLAVGDELKLRYRGEMA-PPWEGV 391
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +E+ALEL+ S GVP H F DFVWK+TSFDRMQ AMKTFA+DE S+
Sbjct: 392 GHVIKIPNNVSDEIALELKRSDGVPDHCTHNFCADFVWKATSFDRMQSAMKTFAIDEESL 451
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
S IYH LLG +++ M+R T+P+RF APGLPELN SQV AVKSVL++P+SLIQGPPGTG
Sbjct: 452 SAPIYHKLLGRDIDQGMLRTTMPKRFSAPGLPELNHSQVNAVKSVLKKPLSLIQGPPGTG 511
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA+IVY ++K G VLVCAPSNVAVDQL EKI ATGLKVVRL AKSREA+ SP+
Sbjct: 512 KTVTSASIVYQLSKMNPGPVLVCAPSNVAVDQLTEKIHATGLKVVRLTAKSREALDSPIG 571
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV + DT EL KL QLK+EQGELSSSDE+KYKAL RA E+EI +ADVICC
Sbjct: 572 FLTLHEQVANNDT--HVELQKLIQLKNEQGELSSSDERKYKALTRACEKEILSTADVICC 629
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVG GDPRL+ FR VL+DE+TQA EPEC+IPLV+G KQVV VGDH QLGPVIM KKA
Sbjct: 630 TCVGCGDPRLSKINFRTVLVDEATQAAEPECMIPLVMGCKQVVFVGDHLQLGPVIMNKKA 689
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL+QSLFERL++LG +PIRL++QYRMHP LSEFPSN FYEGTLQNG+T ER + +
Sbjct: 690 ARAGLSQSLFERLIMLGNRPIRLEIQYRMHPCLSEFPSNMFYEGTLQNGITAQERLRAKV 749
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPVP+ PM F+ +GQEEIS+SGTS+LNRTEA+NVEKIVT F ++GV P QIG++TP
Sbjct: 750 DFPWPVPSLPMMFFQNLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVEPWQIGIVTP 809
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVN+M +G+L+++LYKE+EVASVD+FQGREKDYIILSCVRSNEHQGIGFL+D
Sbjct: 810 YEGQRSYIVNHMQLHGSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSD 869
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRAR+G+VILGNPKVL+K PLW+ LL HYKE CLVEG L+NL+ S++QF K
Sbjct: 870 PRRLNVALTRARFGLVILGNPKVLNKHPLWHYLLVHYKEKGCLVEGVLSNLQPSVMQFPK 929
Query: 838 PKK 840
P++
Sbjct: 930 PRR 932
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 104/142 (73%), Gaps = 9/142 (6%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YCG+ NPACVV+C V C KWFCNSRG+TSGSHIVNHLVRAKHKEVCLH +SPLG
Sbjct: 133 EHACAYCGIFNPACVVKCLV--CNKWFCNSRGSTSGSHIVNHLVRAKHKEVCLHVESPLG 190
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNV--TIRWDIGLN 259
ET ECYNCG +NVFLLGFI AK+E+VVVLLCR+PC M S SKD + T +W +
Sbjct: 191 ETTPECYNCGAKNVFLLGFIPAKSETVVVLLCRQPCAAM---SNSKDVIWDTSQWSPLIE 247
Query: 260 KKRVAYFV--FPKEDNELRLVP 279
+ ++ P E +LR P
Sbjct: 248 DRCFLTWLVKVPTEHEQLRARP 269
>gi|325184899|emb|CCA19391.1| RNA helicase putative [Albugo laibachii Nc14]
Length = 1058
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/807 (57%), Positives = 573/807 (71%), Gaps = 95/807 (11%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLR--------YSGDAA 292
MKE+Q++DNV +RWD+GLNKKR A F + D+E+RLVPGDE+RLR Y G+
Sbjct: 296 MKEAQTQDNVHVRWDLGLNKKRNAIFSCNRPDSEIRLVPGDEIRLRLGPSSILLYGGE-- 353
Query: 293 HPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAV 352
W+ GHV+++ + EV +E+R + VPV+I GF VDFVWK+TSFDRMQ A+KTFAV
Sbjct: 354 ---WEGSGHVLRI-EESEVTMEMR-NNVVPVEITDGFLVDFVWKATSFDRMQAALKTFAV 408
Query: 353 DETSVSGYIYHHLLGHEVEVQMVR--NTLPRRFGAPGLPELNASQVFAVKSVLQRPISLI 410
D+TS++GY+YH +LGH+V++Q +R ++ + APGLPELN Q+ AVK VL +P+SLI
Sbjct: 409 DDTSLTGYLYHKILGHDVDMQALRVPRSIDTKLLAPGLPELNPPQMEAVKGVLSQPLSLI 468
Query: 411 QGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSRE 470
QGPPGTGKTVTSA+IVYHM++Q GQVLV APSN+AVD L KISA GLKVVRL AKSRE
Sbjct: 469 QGPPGTGKTVTSASIVYHMSRQNMGQVLVTAPSNIAVDHLTAKISAIGLKVVRLAAKSRE 528
Query: 471 AVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQ 530
AVS VEHL+LH V+ L + +K+EL KL QLK++QGELSS DEKK+K+LKR EREI Q
Sbjct: 529 AVSCSVEHLSLHTMVKLLTSPDKAELRKLMQLKNDQGELSSQDEKKFKSLKRQAEREILQ 588
Query: 531 SADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGP 590
+ADVIC TCVGAGDPRL+NFRFRQVLIDE+TQATEPECLIP+V GAK VV+VGDHCQLGP
Sbjct: 589 AADVICTTCVGAGDPRLSNFRFRQVLIDEATQATEPECLIPIVQGAKHVVMVGDHCQLGP 648
Query: 591 VIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTIN 650
V+M K+AA AGL QSLF+RL+ L +P RL+VQYRMHP LSEFPSN+FYEG LQNGV+
Sbjct: 649 VVMNKRAASAGLNQSLFDRLLKLDHRPFRLRVQYRMHPCLSEFPSNTFYEGELQNGVSST 708
Query: 651 ERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS 710
ERQ +DFPWP PN+P FFY+ +G EEIS+SGTSYLNRTEA+NVEKIVT FL+ GV+P+
Sbjct: 709 ERQLKNVDFPWPNPNKPTFFYICLGAEEISSSGTSYLNRTEASNVEKIVTAFLKCGVLPA 768
Query: 711 QIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
QIGVITPYEGQRAY+VNYM RNG++R QLYK++EVASVDSFQGREKD IILSCVRSNE+Q
Sbjct: 769 QIGVITPYEGQRAYVVNYMQRNGSMRAQLYKDVEVASVDSFQGREKDLIILSCVRSNENQ 828
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
GIGFL+D RRLNVALTRA+YG++ILGNP+VL+KQ LWN LL HY++H+ +VEGPL+NL+
Sbjct: 829 GIGFLSDRRRLNVALTRAKYGVIILGNPRVLAKQELWNRLLNHYRDHQLVVEGPLSNLQP 888
Query: 831 SMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG 890
S +QF KPK+ S NA+ R SR P NG
Sbjct: 889 SFMQFPKPKQ----------------------SRSNAENRYSR--------PRNG----- 913
Query: 891 LHPAGFPMPRVPLPPFQG--GPPSQPYAIPSRGAV--HGPVGAVHHVPPPGSRGFGAGRG 946
P+PP P ++PS A+ G +G + +PPPG G+G
Sbjct: 914 -----------PIPPLDSRFDPRYDHMSMPSGNAMGMMGDLGPEYGLPPPGPIGYGQHH- 961
Query: 947 SAGAPIGSHLQHQQNTQQ-PIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGP 1005
P L HQ Q+ P G N N GPLTQ +N P+ P
Sbjct: 962 ----PNSHSLHHQLPHQRVPRG------------NMNVNNGGFGPLTQ----DNTPLH-P 1000
Query: 1006 SQTFRDG-FSVGSMSQDF----LGDDF 1027
T DG F+ + +Q F +GD F
Sbjct: 1001 LGTGMDGPFTQAAQTQPFSQLSMGDKF 1027
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 91/114 (79%), Gaps = 8/114 (7%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +PA VV+C + KWFCNSRGNTSGSHI+ HLVR+K+KEV LH DSPLGE
Sbjct: 97 HACAYCGLHDPASVVKC--VASDKWFCNSRGNTSGSHIIQHLVRSKNKEVALHPDSPLGE 154
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
T+LECYNCGCRNVFLLGFI AK +SVVVLLCR+PCL M + KD + WD+
Sbjct: 155 TVLECYNCGCRNVFLLGFIPAKQDSVVVLLCRDPCLQM---NALKD---MSWDM 202
>gi|452987990|gb|EME87745.1| hypothetical protein MYCFIDRAFT_148374 [Pseudocercospora fijiensis
CIRAD86]
Length = 1091
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/715 (61%), Positives = 530/715 (74%), Gaps = 26/715 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+DN+ +RWD GLN K +A FV PK E +++L GDE+RLRY+G+ P W+ V
Sbjct: 297 LKEAQSQDNLIVRWDFGLNNKHLASFVLPKLELGDVKLAVGDEMRLRYTGEL-RPHWEGV 355
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR+ + +P + H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 356 GYVIKIPNNQSDEVTIELRSRGDHKSIPTECTHNFTADYVWKATSFDRMQHAMKTFAVDE 415
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGH+V ++ +PR+F P LP+LN SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 416 MSVSGYIFHRLLGHDVNAAPLKVNMPRKFSVPNLPDLNGSQINAVKSVLQKPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH++K GQVLVCAPSNVAVDQL E+I TGLKVVR+ AKSRE S
Sbjct: 476 GTGKTVTSATIIYHLSKMNGGQVLVCAPSNVAVDQLCERIHITGLKVVRVTAKSREDAES 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L+LH QV DT+ EL KL+QLKDEQGELSS DEKK+KAL RA EREI Q+ADV
Sbjct: 536 NVGFLSLHRQVSMNDTN--VELSKLKQLKDEQGELSSQDEKKFKALTRAAEREILQNADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 594 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRLQVQYRMHP LSEFPSN FYEG+LQNG+T+ +R
Sbjct: 654 KKAAKAGLNQSLFERLVVLGCAPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGITMQQRLR 713
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV PS IG+
Sbjct: 714 KDVDFPWPVADSPMMFWSNLGNEEISASGTSYLNRTEAQNVEKIVTRFFKAGVSPSAIGI 773
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V M + G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 774 ITPYEGQRSYVVQSMQQTGTFKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 833
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG VILGNPKVLSK PLW+ LL H+KE CLVEGPLNNL+ S++Q
Sbjct: 834 LSDPRRLNVALTRAKYGCVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLNNLQVSLLQ 893
Query: 835 FQKPKKIYNDRRLF---------FGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNG 885
F +PK Y + + A G N P AD GS GY+ P +
Sbjct: 894 FSRPKTSYRGPQRYQMAYQHANHMAAATGNRMNGRRDGPPGAD--GS-VVGYI-PDDVSS 949
Query: 886 THKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRG 940
H L A P + FQG S P +P+ G +GP+G H PP G
Sbjct: 950 VHSSALGGAALPTQYPAM--FQGFQESWP-QLPA-GQRNGPIGDKTHAPPESIAG 1000
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 92/122 (75%), Gaps = 8/122 (6%)
Query: 134 EYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVC 193
++ + + HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV
Sbjct: 88 QHEEVELPAHACAYCGIHNPSSVVKC--LTCAKWFCSARGNTSSSHIVNHLVRARHKEVQ 145
Query: 194 LHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIR 253
LH SPLG+T LECYNCG +NVFLLGFI AK+++VVVLLCR+PC M SKD +
Sbjct: 146 LHPSSPLGDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAM---PSSKD---MN 199
Query: 254 WD 255
WD
Sbjct: 200 WD 201
>gi|378734810|gb|EHY61269.1| regulator-nonsense transcripts 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1076
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/684 (63%), Positives = 521/684 (76%), Gaps = 20/684 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+DN+ +RWD+GLN K +A FV PK E +++L GDE+RL+Y+GD PAW+ V
Sbjct: 285 LKESQSQDNLIVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGDL-RPAWEGV 343
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWK+TSFDRMQ AMKTFA+DE
Sbjct: 344 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKATSFDRMQLAMKTFAIDE 403
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ LP++F PGLP+LN+SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 404 MSVSGYIFHRLLGHEVAAAPMKTQLPKKFTVPGLPDLNSSQINAVKSVLQKPLSLIQGPP 463
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH++K GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 464 GTGKTVTSATIIYHLSKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 523
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L+LH QVR D++ EL KL QLK E GELSS DEKKYK+L RA EREI +ADV
Sbjct: 524 SVSFLSLHEQVRMNDSN--VELAKLNQLKSELGELSSQDEKKYKSLTRAAEREILTNADV 581
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 582 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 641
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNGVT+ +R
Sbjct: 642 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQDRLR 701
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV P IGV
Sbjct: 702 PDVDFPWPVADSPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVHPQSIGV 761
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR++IV+ M NG +++LYKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 762 ITPYEGQRSFIVSSMQTNGTFKKELYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 821
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LL H+KE CLVEGPL+NL+ S+ Q
Sbjct: 822 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLSNLQISLHQ 881
Query: 835 FQKPKKIYNDRRLFFGA-------GPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTH 887
F +PK+ Y + + A G++ N N R GS GY+ P + H
Sbjct: 882 FSRPKQSYRGPQRYQMAYNHASHMASGMM-NGGRAGMRNDYRDGSSVVGYI-PDDVSSIH 939
Query: 888 KPGLHPAGFPMPRVPLPPFQGGPP 911
+ G P P+ FQG P
Sbjct: 940 SSAIGGVGVPTGYPPM--FQGFTP 961
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 89/112 (79%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+CVVRC +C KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 85 HACAYCGIHNPSCVVRC--LTCGKWFCSARGNTSSSHIVNHLVRARHKEVQLHPSSSLGD 142
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
T+LECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 143 TVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 193
>gi|328709620|ref|XP_003244017.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1125
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/616 (66%), Positives = 494/616 (80%), Gaps = 13/616 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+T+RWD+GLNKK +AYF K D ++RL+ GDELRLR +G+ W +G
Sbjct: 301 LKESQTQENITVRWDVGLNKKAIAYFHLAKTDGDMRLMHGDELRLRLTGENP---WAGIG 357
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ E+V LEL+ + GVP +I + VDF+WKSTSFDRMQ ++K FA DE+SVS
Sbjct: 358 HVIKIPDNYGEDVGLELKINNGVPTEITSNYVVDFIWKSTSFDRMQCSLKRFATDESSVS 417
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHE + M R+ +P+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 418 SYIYHRLLGHEFDDLMFRSHMPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGK 477
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + K G VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV
Sbjct: 478 TVTSATIVYQLVKINGGPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSF 537
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH QVR + S EL K QQLKDE GELS +DEK+Y+ALK+A ERE+ ++ADVIC T
Sbjct: 538 LALHNQVRKM--SCNVELQKFQQLKDETGELSMADEKRYRALKKAAERELLKAADVICTT 595
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL F+F +LIDES QATEPEC++P+VLG KQ++LVGDHCQLGPV+MCKKAA
Sbjct: 596 CVGAGDPRLVRFKFHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAA 655
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
RAGL+QSLFERLV+LG++P RL+VQYRMHP LS FPSN FYEG+LQNGV ++R+ S I+
Sbjct: 656 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADDRKLSKIE 715
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWPV ++PM FYV GQEEI+ SGTSYLNRTEAANVEKI T FLR GV P QIG+ITPY
Sbjct: 716 FPWPVADKPMLFYVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRCGVKPDQIGIITPY 775
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM L ++Y+EIE+ASVD+FQGREKD II+SCVRSNEHQGIGFLNDP
Sbjct: 776 EGQRAYLVQYMQYQAPLPAKVYQEIEIASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDP 835
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YGI+I+GNPKVLSKQ LWN LL +YK + LVEGPLNNLK+S++Q KP
Sbjct: 836 RRLNVALTRAKYGILIVGNPKVLSKQQLWNHLLNYYKANNVLVEGPLNNLKESLIQLSKP 895
Query: 839 KKIYNDRRLFFGAGPG 854
K++ N A PG
Sbjct: 896 KQLVN------AANPG 905
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 129/216 (59%), Gaps = 32/216 (14%)
Query: 70 SRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDD 129
S+S PP S + HR + S+ + + +T+ + + + L FE+ +D
Sbjct: 42 SQSQPPMSQLDSSSSTHR----MQLLSNKTDK-----DDTNVITVTKKIGELQFEDEEED 92
Query: 130 VEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 189
+ + +AC+YCG+ +P CVV CN+ C+KWFCN RGNTSGSHI+NHLVRAKH
Sbjct: 93 ----SFFTKELPYYACKYCGIHDPGCVVMCNI--CKKWFCNGRGNTSGSHIINHLVRAKH 146
Query: 190 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC--LNMMKESQSK 247
KEV LHKD PLGET+LECY+CG +NVF+LGFI AK +SVV+LLCR+PC N +K+
Sbjct: 147 KEVTLHKDGPLGETVLECYSCGVKNVFVLGFIPAKADSVVILLCRQPCSTQNALKD---- 202
Query: 248 DNVTIRWDIGLNKKRVAYFVF-------PKEDNELR 276
+ WD K +A F P E ++LR
Sbjct: 203 ----MNWDQEQWKPLIADRCFLTWLVKVPNETDQLR 234
>gi|430813983|emb|CCJ28727.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1045
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/605 (68%), Positives = 497/605 (82%), Gaps = 6/605 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYF-VFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++D + +RWDIGLN+K VAYF + E +L++ GDE+RLRY G+ + W+S+
Sbjct: 294 VKESQTQDGIVVRWDIGLNQKYVAYFRIKVLEAGDLKVAVGDEMRLRYLGELRN-HWESI 352
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
G+VIK+ +EV LEL+ S + D H FS+D+VWKSTSFDRMQ A+K A++E SV
Sbjct: 353 GYVIKIPNNISDEVGLELKKSDKIQTDCTHNFSIDYVWKSTSFDRMQTALKQLAINEASV 412
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGH++ +++ +P+RF +PGLPELN SQV+AV+SVLQ+P+SLIQGPPGTG
Sbjct: 413 SGYIYHKLLGHDIAPLVLKTQMPKRFSSPGLPELNVSQVYAVRSVLQKPLSLIQGPPGTG 472
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+AK GQVLVCAPSNVAVDQL +KI TGLKVVR+ AKSRE + SPV
Sbjct: 473 KTVTSATIVYHLAKMNSGQVLVCAPSNVAVDQLCKKIHQTGLKVVRVSAKSREDLESPVA 532
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QVR+ DT+ +EL KL QL+DE GELSS DEKKYKAL + E+EI +ADVIC
Sbjct: 533 SLTLHEQVRNNDTN--TELQKLIQLRDELGELSSQDEKKYKALVKMCEKEILSNADVICA 590
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVG GDPRL+ F+FR VLIDE+TQATEPEC+IPLV+G KQVVLVGDH QLGPVIM KKA
Sbjct: 591 TCVGCGDPRLSKFKFRTVLIDEATQATEPECMIPLVMGCKQVVLVGDHQQLGPVIMNKKA 650
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
A+AGL QSLFERLV+LG+ PIRL VQYRMHP LSEFPSN FYEGTLQNGV+ NER +
Sbjct: 651 AKAGLQQSLFERLVVLGISPIRLTVQYRMHPCLSEFPSNMFYEGTLQNGVSKNERLRKNV 710
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPV + PM F++ +GQEEIS+SGTSYLNRTEA+N EKIV F ++GV SQIG+ITP
Sbjct: 711 DFPWPVNDTPMMFHMSLGQEEISSSGTSYLNRTEASNCEKIVVKFFKAGVKFSQIGIITP 770
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIV+ M ++G+LR+ LYKEIEVASVD+FQGREKDYII+SCVRSNEHQGIGFL+D
Sbjct: 771 YEGQRSYIVSSMQQSGSLRKDLYKEIEVASVDAFQGREKDYIIVSCVRSNEHQGIGFLSD 830
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRA+YG+VILGNPKVLSK PLW LL HYKE CLVEGPLNNL+ SM+ F K
Sbjct: 831 PRRLNVALTRAKYGVVILGNPKVLSKHPLWYHLLLHYKEKNCLVEGPLNNLQVSMIHFPK 890
Query: 838 PKKIY 842
PK Y
Sbjct: 891 PKTDY 895
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 104/150 (69%), Gaps = 16/150 (10%)
Query: 114 IVEGMA--GLSFEETGDDV-EGFEYGKADFTEH-----ACRYCGVSNPACVVRCNVPSCR 165
+V+G++ L+ EE ++ + +E K E AC YCG+ P+ V++C +C
Sbjct: 58 VVDGISLKSLNLEEGHTEIRDVYEENKETMAEESLPDWACSYCGIHTPSSVLKC--LTCD 115
Query: 166 KWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKT 225
KWFCNSRGNTS SHIV HLVRA+HK+V LH +SPLGETILECYNCG +NVFLLGFI AK+
Sbjct: 116 KWFCNSRGNTSSSHIVKHLVRARHKDVMLHHNSPLGETILECYNCGIKNVFLLGFIPAKS 175
Query: 226 ESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
++VVVLLCR+PC + SKD + WD
Sbjct: 176 DTVVVLLCRQPCASA---QSSKD---MNWD 199
>gi|242774708|ref|XP_002478495.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722114|gb|EED21532.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1093
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/617 (67%), Positives = 497/617 (80%), Gaps = 9/617 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 287 LKESQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 345
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 346 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKATSFDRMQYAMKTFAVDE 405
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGY++H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 406 MSVSGYLFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQKPLSLIQGPP 465
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 466 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 525
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR D++ EL+KL QLK E GELSS DEKK+K L RA EREI +ADV
Sbjct: 526 PVRFLSLHEQVRMNDSN--IELNKLNQLKSELGELSSQDEKKFKQLTRAAEREILTNADV 583
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 584 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 643
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNGV++ +R
Sbjct: 644 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLR 703
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 704 RDVDFPWPVAENPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPSDIGI 763
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 764 ITPYEGQRSYVVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 823
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE +CLVEGPL+NL++S+VQ
Sbjct: 824 LSDPRRLNVALTRAKYGVVILGNPKVLSKHPLWNYLLLHFKERKCLVEGPLSNLQESLVQ 883
Query: 835 FQKPKKIYNDRRLFFGA 851
F +PK+ Y + F A
Sbjct: 884 FSRPKQAYRGPQRFHMA 900
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 87 HACAYCGIHNPSSVVKC--LTCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPSSSLGD 144
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +N FLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 145 TILECYNCGTKNAFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 195
>gi|212532107|ref|XP_002146210.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
gi|210071574|gb|EEA25663.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
Length = 1093
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/617 (67%), Positives = 497/617 (80%), Gaps = 9/617 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 287 LKESQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 345
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 346 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKATSFDRMQYAMKTFAVDE 405
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGY++H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 406 MSVSGYLFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQKPLSLIQGPP 465
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 466 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 525
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR D++ EL+KL QLK E GELSS DEKK+K L RA EREI +ADV
Sbjct: 526 PVRFLSLHEQVRMNDSN--IELNKLNQLKSELGELSSQDEKKFKQLTRAAEREILTNADV 583
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 584 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 643
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNGV++ +R
Sbjct: 644 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLR 703
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 704 RDVDFPWPVAENPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPSGIGI 763
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 764 ITPYEGQRSYVVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 823
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE +CLVEGPL+NL++S+VQ
Sbjct: 824 LSDPRRLNVALTRAKYGVVILGNPKVLSKHPLWNYLLLHFKERKCLVEGPLSNLQESLVQ 883
Query: 835 FQKPKKIYNDRRLFFGA 851
F +PK+ Y + F A
Sbjct: 884 FSRPKQAYRGPQRFHMA 900
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C SC KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 87 HACAYCGIHNPSSVVKC--LSCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPSSSLGD 144
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +N FLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 145 TILECYNCGTKNAFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 195
>gi|71003407|ref|XP_756384.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
gi|46095821|gb|EAK81054.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
Length = 1088
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/603 (69%), Positives = 494/603 (81%), Gaps = 12/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++ ++ IRWD GLN+K++A+ + PK E E+RL GDEL+LRY G+ A P W+ V
Sbjct: 328 LKESQTQQDLVIRWDQGLNQKKIAWMMLPKLESGEVRLAVGDELKLRYRGEMA-PPWEGV 386
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +EVALEL + GVP H F DFVWK+TSFDRMQ AMKTFAVDE S+
Sbjct: 387 GHVIKIPNHVSDEVALELNRADGVPDHCTHNFFADFVWKATSFDRMQNAMKTFAVDEQSL 446
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
S YIYH LLGHE++ +R T+P+RF APGLPELN SQV AVKSVLQ+P+SLIQGPPGTG
Sbjct: 447 SAYIYHKLLGHEIDNATLRTTMPKRFSAPGLPELNHSQVNAVKSVLQKPLSLIQGPPGTG 506
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVY ++K G VLVCAPSNVAVDQL EKI TGLKVVRL AKSREA+ P+
Sbjct: 507 KTVTSATIVYQLSKMNPGPVLVCAPSNVAVDQLTEKIHLTGLKVVRLTAKSREALDGPIS 566
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
LTLH QV + DT+ EL KL QLK+EQGELSSSDE+KYKAL RA E+EI +ADVICC
Sbjct: 567 FLTLHEQVANNDTN--IELQKLIQLKNEQGELSSSDERKYKALTRACEKEILSTADVICC 624
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVG GDPRL+ +FR VL+DE+TQA EPEC+IPLV V VGDH QLGPVIM KK
Sbjct: 625 TCVGCGDPRLSKIKFRTVLVDEATQAAEPECMIPLV------VFVGDHLQLGPVIMNKKV 678
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAG +QSLFERL++LG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT ER +
Sbjct: 679 ARAGASQSLFERLIMLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDV 738
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPVP+ PM F+ +GQEEIS+SGTS+LNRTEAANVEKIVT F ++GV PSQIG++TP
Sbjct: 739 DFPWPVPSLPMLFFQNLGQEEISSSGTSFLNRTEAANVEKIVTRFFKAGVKPSQIGIVTP 798
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIVN+M +G+L+++LYK++EVASVD+FQGREKDYIILSCVRSNEHQGIGFL+D
Sbjct: 799 YEGQRSYIVNHMQLHGSLKKELYKDVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSD 858
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRAR+G+VILGNPKVL+K PLW+ LL HYKE CLVEG L+NL+ SM+QF K
Sbjct: 859 PRRLNVALTRARFGLVILGNPKVLNKHPLWHYLLVHYKEKGCLVEGVLSNLQPSMMQFPK 918
Query: 838 PKK 840
P++
Sbjct: 919 PRR 921
Score = 183 bits (464), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 121/185 (65%), Gaps = 11/185 (5%)
Query: 99 SKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVR 158
+K ++SN S + + +A LS E G E + EHAC YCG+ NPACVV+
Sbjct: 87 TKADVPSASNHSHTALHADLASLS--EAGISDEADPALLENLPEHACAYCGIFNPACVVK 144
Query: 159 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 218
C +C KWFCNSRG+TSGSHIVNHLVRAKHKEVCLH +SPLGET ECYNCG +NVFLL
Sbjct: 145 C--LTCNKWFCNSRGSTSGSHIVNHLVRAKHKEVCLHAESPLGETTPECYNCGAKNVFLL 202
Query: 219 GFISAKTESVVVLLCREPCLNMMKESQSKDNV--TIRWDIGLNKKRVAYFV--FPKEDNE 274
GFI AK+E+VVVLLCR+PC M S SKD + T +W + + ++ P E +
Sbjct: 203 GFIPAKSETVVVLLCRQPCAAM---SNSKDIIWDTTQWSPLIEDRCFLTWLVKVPSEHEQ 259
Query: 275 LRLVP 279
LR P
Sbjct: 260 LRARP 264
>gi|159487559|ref|XP_001701790.1| UPF1 protein [Chlamydomonas reinhardtii]
gi|158281009|gb|EDP06765.1| UPF1 protein [Chlamydomonas reinhardtii]
Length = 800
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/603 (68%), Positives = 494/603 (81%), Gaps = 4/603 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQS+D++T+RWD GLN KRVAYF FP++DNEL+L+ GDEL+LR+ + AW+++G
Sbjct: 200 IKESQSRDDITLRWDWGLNAKRVAYFYFPRDDNELKLMQGDELKLRHKNASNRGAWEALG 259
Query: 301 HVIKLTAQEEVALELRAS-QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
HV+ EEV LEL + VP D GFSVDFVW+ TSFDRM+ A+ TF S+SG
Sbjct: 260 HVLTYQQSEEVCLELFTNVSDVPEDCTVGFSVDFVWRGTSFDRMRNALNTFRKYSASISG 319
Query: 360 YIYHHLLGHEVEVQMVRNTLPRR-FGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
Y+YH +LGH VE ++ LP+ G P LPELN SQ+ AVKSVLQ+P+SLIQGPPGTGK
Sbjct: 320 YLYHLILGHPVESVTLKIPLPKAGLGVPSLPELNHSQLHAVKSVLQQPLSLIQGPPGTGK 379
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSAAIVYH+A G GQVLV APSNVAVDQLA K+ TGLKVVRLCAK+REAV+SPVEH
Sbjct: 380 TVTSAAIVYHLAHSGTGQVLVAAPSNVAVDQLAHKMDQTGLKVVRLCAKTREAVASPVEH 439
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
LTLHYQV L KL L+ QG L++SDEK+ K+L+R E E+ ++ADV+C T
Sbjct: 440 LTLHYQVH--GCVLVGRLRKLLALRGAQGGLNASDEKELKSLRRRLEMEVLENADVVCTT 497
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL++FRF+ VLIDESTQA EPECLIP+VLGAKQV+LVGDHCQLGPVIMCKKAA
Sbjct: 498 CVGAGDPRLSHFRFQHVLIDESTQAAEPECLIPMVLGAKQVILVGDHCQLGPVIMCKKAA 557
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
AGL QSLFERL LLG+KPIRLQVQYRMHP LSEFPSN+FYEGTLQNG + ER+ +G+D
Sbjct: 558 EAGLCQSLFERLRLLGVKPIRLQVQYRMHPCLSEFPSNTFYEGTLQNGTGMGERRLAGVD 617
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P++PM F+VQ+G EEISAS TSYLNRTEAA VEK+VT FL++G+ P+QIGVITPY
Sbjct: 618 FPWPNPDKPMMFWVQLGAEEISASSTSYLNRTEAAAVEKVVTRFLQNGMSPAQIGVITPY 677
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRA++V+ M RNG RQ LYKEIEV+SVD+FQGREKD I+LSCVRSNEH IGFL+DP
Sbjct: 678 EGQRAHVVSVMVRNGTARQDLYKEIEVSSVDAFQGREKDIIVLSCVRSNEHSSIGFLSDP 737
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRAR+G+V+LGNP+VLS+QPLWN LL ++KEH CL EGPL NLK SMVQ KP
Sbjct: 738 RRLNVALTRARFGLVVLGNPRVLSRQPLWNSLLQYFKEHGCLAEGPLTNLKASMVQLHKP 797
Query: 839 KKI 841
K++
Sbjct: 798 KRV 800
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
Query: 147 YCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILE 206
YCG+ NP+CVV+C S KWFCN R + +GS I+ HLV++K+KEV LH+DSPLG+T+LE
Sbjct: 2 YCGIHNPSCVVKC--LSTNKWFCNGRVHGTGSCIILHLVKSKNKEVQLHRDSPLGDTVLE 59
Query: 207 CYNCGCRNVFLLGFISAKTESVVVLLCRE 235
CY G RN+F+LGF+ K+E+ VVLL R+
Sbjct: 60 CYASGTRNLFVLGFVPVKSENTVVLLARD 88
>gi|407927468|gb|EKG20360.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 1086
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/608 (68%), Positives = 488/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD GLN K +A FV PK E +++L GDE+RLRY+G+ P W+ V
Sbjct: 283 LKESQSQDGLIVRWDYGLNNKHLASFVLPKLELGDVKLAVGDEMRLRYTGEL-RPHWEGV 341
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP + H F+ D+VWK+TSFDRMQ AMKTFA+DE
Sbjct: 342 GYVIKIPNNQSDEVTIELRTKGDHKSVPTECTHNFTADYVWKATSFDRMQHAMKTFAIDE 401
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ LPR+F PGLPELN SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 402 MSVSGYIFHRLLGHEVAAAPMKTQLPRKFSVPGLPELNGSQINAVKSVLQKPLSLIQGPP 461
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 462 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 521
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR DT+ EL+KL QLK E GELSS DEKK+K L RA EREI +ADV
Sbjct: 522 PVGFLSLHEQVRMNDTN--VELNKLNQLKSELGELSSQDEKKFKQLTRAAEREILTNADV 579
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 580 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 639
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRLQVQYRMHP LSEFPSN FYEG+LQNGVT R
Sbjct: 640 KKAAKAGLNQSLFERLVILGCAPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTRESRMR 699
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV P IG+
Sbjct: 700 KEVDFPWPVGDSPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPQDIGI 759
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V M NG +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 760 ITPYEGQRSYVVQSMQANGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 819
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LL H+KE CLVEGPLNNL+ S++Q
Sbjct: 820 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLNNLQVSLLQ 879
Query: 835 FQKPKKIY 842
F +PK Y
Sbjct: 880 FSRPKTTY 887
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C SC KWFC++RGNTS SHI+NHLVRA+HKEV LH S LG+
Sbjct: 83 HACAYCGIHNPSSVVKC--LSCSKWFCSARGNTSSSHIINHLVRARHKEVQLHPSSSLGD 140
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
T+LECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 141 TVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 191
>gi|298707435|emb|CBJ30064.1| RNA helicase [Ectocarpus siliculosus]
Length = 1101
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/617 (67%), Positives = 504/617 (81%), Gaps = 9/617 (1%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYS--GDAAH-PAWQ 297
K+SQ +D +++RWD GLNKK +A F + E++ R+ GDEL+L G AH W+
Sbjct: 353 KDSQGQDGLSVRWDQGLNKKHIALFRLAQSEEHMARMTAGDELKLSLDPVGQRAHGKPWE 412
Query: 298 SVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
+GHV+++ A EVAL + VP +I G+ VDFVWK+ S+DRMQ A+KTFAVD+TSV
Sbjct: 413 GLGHVLRI-ADSEVALMMLGGM-VPTEITDGYQVDFVWKAVSYDRMQVALKTFAVDDTSV 470
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGYIYH LLGHEVE Q++R TLP RF APGLPELN SQ AVK+VLQRP+SLIQGPPGTG
Sbjct: 471 SGYIYHRLLGHEVEPQVLRVTLPPRFSAPGLPELNHSQFTAVKAVLQRPLSLIQGPPGTG 530
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA +VYH+A+QG GQVLVCAPSNVAVD L KISATGL+VVRLCAKSREAVS+ V+
Sbjct: 531 KTVTSATLVYHLARQGMGQVLVCAPSNVAVDHLTAKISATGLRVVRLCAKSREAVSTDVD 590
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
HL+LH VR LDT +K +L KLQ LKDE GEL ++DEK+++ L+ + EREI Q+ADVIC
Sbjct: 591 HLSLHVMVRALDTPDKQDLRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICT 650
Query: 538 TCVGAGDPRLAN--FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
TCVGAGDPRL+N RFRQVLIDE+TQA E ECLIP+V+GAKQ+VLVGDHCQLGPV++CK
Sbjct: 651 TCVGAGDPRLSNVNLRFRQVLIDEATQAMEAECLIPIVMGAKQLVLVGDHCQLGPVVLCK 710
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
K+++AGL QSLFERLVLLG++P+RLQVQYRMHP LSE+PSN FYEGTLQNGVT ER
Sbjct: 711 KSSKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERVMD 770
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
+DFPWPVP++PMFF + G EEIS+SGTSYLNRTEA VEK VT FL+ GV P QIGV+
Sbjct: 771 QVDFPWPVPSKPMFFLMTTGVEEISSSGTSYLNRTEATAVEKCVTRFLQKGVTPDQIGVV 830
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPYEGQR+Y+V+++ R G+LR LY EIEVASVDSFQGREKD I+L+CVRSNEHQGIGFL
Sbjct: 831 TPYEGQRSYLVDHLQRTGSLRSSLYSEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFL 890
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
+DPRRLNVALTRAR+G +I+GNP++L+K PLWN L+ YK+HECLVEGPL+N++ S++ F
Sbjct: 891 SDPRRLNVALTRARFGCIIIGNPRILAKNPLWNALVNFYKDHECLVEGPLDNMQPSLMSF 950
Query: 836 QKPKKIYND-RRLFFGA 851
P ND RRL+F A
Sbjct: 951 PPPLNRRNDQRRLYFTA 967
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
Query: 116 EGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 175
EG + E G+ +G + E ACR+CG+ +PACVVRC KWFCNS GN
Sbjct: 126 EGAMSMLEGEEGERADGDYAKDVEAPEWACRFCGIHDPACVVRC--VESGKWFCNSCGNA 183
Query: 176 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTES 227
SGSHI+ HLVR+++ +VCLH DSPLGETILECYNCG RN+FL+GF+ AK +S
Sbjct: 184 SGSHIIQHLVRSRNNQVCLHPDSPLGETILECYNCGSRNLFLMGFVPAKADS 235
>gi|302829609|ref|XP_002946371.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f. nagariensis]
gi|300268117|gb|EFJ52298.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f. nagariensis]
Length = 1135
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/641 (65%), Positives = 502/641 (78%), Gaps = 32/641 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQS+D++++RWD GLN KRVAYF FP++DNEL+L+ GDEL+LR+ W+++G
Sbjct: 369 IKESQSRDDISLRWDWGLNNKRVAYFYFPRDDNELKLMQGDELKLRHKNAGNRGPWEALG 428
Query: 301 HVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGY 360
HV+ EEV LEL A+ VP D G+SVDFVW+ TS+DRM+ A+ TF S+SGY
Sbjct: 429 HVLTYQQSEEVCLELFAND-VPEDCTVGYSVDFVWRGTSYDRMRNALNTFRKYSASISGY 487
Query: 361 IYHHLLGHEVEVQMVRNTLPRR-FGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
+YH +LGH VE ++ LP+ F P LPELN SQ+ AVKSVL +P+SLIQGPPGTGKT
Sbjct: 488 LYHLILGHPVESVTLKIPLPKAGFAVPTLPELNHSQLHAVKSVLHQPLSLIQGPPGTGKT 547
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSAAIVYH+A G GQVLV APSNVAVDQLA K+ TGLKVVRLCAK+REAV+SPVEHL
Sbjct: 548 VTSAAIVYHLAHSGTGQVLVAAPSNVAVDQLAHKMDQTGLKVVRLCAKTREAVASPVEHL 607
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQV H+ E L KL L+ QG L++SDEK+ K+L+R E E+ ++ADV+C TC
Sbjct: 608 TLHYQVTHMAVPEGERLRKLLALRGAQGGLNASDEKELKSLRRRLEMEVLENADVVCTTC 667
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ--------------------- 578
VGAGDPRLANFRF+ VLIDESTQA EPECLIP+VLGAKQ
Sbjct: 668 VGAGDPRLANFRFQHVLIDESTQAAEPECLIPMVLGAKQLPHAAQWVFLLLASPHVHRWR 727
Query: 579 -------VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLS 631
V+LVGDHCQLGPVIMCKKAA AGL QSLFERL LLG+KPIRLQVQYRMHP LS
Sbjct: 728 TSMLTAKVILVGDHCQLGPVIMCKKAAEAGLCQSLFERLRLLGVKPIRLQVQYRMHPCLS 787
Query: 632 EFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTE 691
EFPSN+FYEGTLQNG + ER+ G+DFPW P++PM F+VQ+G EEISASGTSYLNRTE
Sbjct: 788 EFPSNTFYEGTLQNGTGMGERRLVGVDFPWHNPDKPMMFWVQLGAEEISASGTSYLNRTE 847
Query: 692 AANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSF 751
AA VEK+VT FL++G+ PSQIGVITPYEGQRA++V+ M RNGA+RQ LYKEIEV+SVD+F
Sbjct: 848 AAAVEKVVTRFLQNGMSPSQIGVITPYEGQRAHVVSVMVRNGAVRQDLYKEIEVSSVDAF 907
Query: 752 QGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
QGREKD I+LSCVRSNEH IGFL+DPRRLNVALTRARYG+V+LGNP+VLS+QPLWN LL
Sbjct: 908 QGREKDIIVLSCVRSNEHSSIGFLSDPRRLNVALTRARYGLVVLGNPRVLSRQPLWNSLL 967
Query: 812 THYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGAG 852
++KE CLVEGPL NLK SMVQ KPK++++ R FG G
Sbjct: 968 QYFKESGCLVEGPLTNLKPSMVQLHKPKRVFD--RGSFGVG 1006
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 73/94 (77%), Gaps = 2/94 (2%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
E AC YCG+ NPACVV+C S KWFCN R + SGS I+ HLV++K+KEV LHKDSPLG
Sbjct: 157 EWACAYCGIHNPACVVKC--LSTNKWFCNGRVHGSGSCIILHLVKSKNKEVQLHKDSPLG 214
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
+T+LECY G RN+F+LGF+ K+E+ VVLL R+
Sbjct: 215 DTVLECYASGSRNLFVLGFVPVKSENTVVLLARD 248
>gi|303320095|ref|XP_003070047.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109733|gb|EER27902.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320031876|gb|EFW13833.1| ATP-dependent helicase NAM7 [Coccidioides posadasii str. Silveira]
gi|392865836|gb|EAS31677.2| ATP-dependent helicase NAM7 [Coccidioides immitis RS]
Length = 1101
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/608 (67%), Positives = 495/608 (81%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + ++WD+GLN K +A FV PK E +++L GDE+RL+YSG+ P W+ V
Sbjct: 294 LKEAQSQDGLIVKWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYSGEL-RPKWEGV 352
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 353 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQSAMKTFAVDE 412
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVS YI+H LLG+EV ++ LP++F APGLP LN SQ+ AVK+VLQ+P+SLIQGPP
Sbjct: 413 LSVSNYIFHRLLGNEVAAGPMKTQLPKKFTAPGLPGLNPSQINAVKAVLQKPLSLIQGPP 472
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA ++YH+AK GQVLVCAPSNVAVDQL E I TGLK VR+ AKSRE V S
Sbjct: 473 GTGKTVTSATVIYHLAKISGGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVES 532
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV HL+LH QVR+ D++ EL KL QLK++ GELSS DEKK+K L RA E+EI +ADV
Sbjct: 533 PVRHLSLHEQVRNNDSN--VELMKLTQLKNDMGELSSQDEKKFKQLTRAAEKEILSNADV 590
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ++EPEC+IPLV+G KQVVLVGDH QLGPVIM
Sbjct: 591 ICCTCVGAGDPRLAKFKFRTVLIDESTQSSEPECMIPLVMGCKQVVLVGDHLQLGPVIMN 650
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS FPSN FYEG+LQNGVT ++R
Sbjct: 651 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSAFPSNMFYEGSLQNGVTSDDRLL 710
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV ++PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 711 KDVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSAIGI 770
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M NG +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 771 ITPYEGQRSYVVSSMQLNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 830
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S+VQ
Sbjct: 831 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEGNCLVEGPLSNLQTSLVQ 890
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 891 FSRPKQAY 898
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 89/116 (76%), Gaps = 8/116 (6%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ N + VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH +S LGE
Sbjct: 94 HACCYCGIHNTSSVVKC--LACNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESALGE 151
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGL 258
T+LECYNCG RNVFLLGFI AK+++VVVLLCR+PC M SKD + WD L
Sbjct: 152 TVLECYNCGTRNVFLLGFIPAKSDTVVVLLCRQPCAAM---PSSKD---MNWDTSL 201
>gi|119183909|ref|XP_001242931.1| hypothetical protein CIMG_06827 [Coccidioides immitis RS]
Length = 1089
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/608 (67%), Positives = 495/608 (81%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + ++WD+GLN K +A FV PK E +++L GDE+RL+YSG+ P W+ V
Sbjct: 282 LKEAQSQDGLIVKWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYSGEL-RPKWEGV 340
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 341 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQSAMKTFAVDE 400
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVS YI+H LLG+EV ++ LP++F APGLP LN SQ+ AVK+VLQ+P+SLIQGPP
Sbjct: 401 LSVSNYIFHRLLGNEVAAGPMKTQLPKKFTAPGLPGLNPSQINAVKAVLQKPLSLIQGPP 460
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA ++YH+AK GQVLVCAPSNVAVDQL E I TGLK VR+ AKSRE V S
Sbjct: 461 GTGKTVTSATVIYHLAKISGGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVES 520
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV HL+LH QVR+ D++ EL KL QLK++ GELSS DEKK+K L RA E+EI +ADV
Sbjct: 521 PVRHLSLHEQVRNNDSN--VELMKLTQLKNDMGELSSQDEKKFKQLTRAAEKEILSNADV 578
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ++EPEC+IPLV+G KQVVLVGDH QLGPVIM
Sbjct: 579 ICCTCVGAGDPRLAKFKFRTVLIDESTQSSEPECMIPLVMGCKQVVLVGDHLQLGPVIMN 638
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS FPSN FYEG+LQNGVT ++R
Sbjct: 639 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSAFPSNMFYEGSLQNGVTSDDRLL 698
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV ++PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 699 KDVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSAIGI 758
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M NG +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 759 ITPYEGQRSYVVSSMQLNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 818
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S+VQ
Sbjct: 819 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEGNCLVEGPLSNLQTSLVQ 878
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 879 FSRPKQAY 886
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 89/116 (76%), Gaps = 8/116 (6%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ N + VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH +S LGE
Sbjct: 82 HACCYCGIHNTSSVVKC--LACNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESALGE 139
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGL 258
T+LECYNCG RNVFLLGFI AK+++VVVLLCR+PC M SKD + WD L
Sbjct: 140 TVLECYNCGTRNVFLLGFIPAKSDTVVVLLCRQPCAAM---PSSKD---MNWDTSL 189
>gi|226286939|gb|EEH42452.1| ATP-dependent helicase NAM7 [Paracoccidioides brasiliensis Pb18]
Length = 1087
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/608 (68%), Positives = 491/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W V
Sbjct: 283 LKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGEL-RPKWDGV 341
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP D H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 342 GYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDE 401
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV +R +P++F PGLP+LN+SQ AVKSVLQ+P+SLIQGPP
Sbjct: 402 MSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKPLSLIQGPP 461
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 462 GTGKTVTSANIIYHLAKINGGQVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVES 521
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QV + D++ EL KL QLK E GELSS DEKKYK L RA EREI +ADV
Sbjct: 522 PVGFLSLHEQVHNNDSN--IELVKLNQLKAELGELSSQDEKKYKQLVRAAEREILSNADV 579
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 580 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 639
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FY+G+LQNGVT +ER
Sbjct: 640 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLL 699
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 700 KDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGI 759
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++LYKEIEVASVD+FQGREKDYI+LSCVRSN+HQGIGF
Sbjct: 760 ITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGF 819
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S+VQ
Sbjct: 820 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQ 879
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 880 FSRPKQAY 887
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 89/112 (79%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
H+C YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH +S LG+
Sbjct: 83 HSCAYCGIHNPSSVVKC--LTCTKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESSLGD 140
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 141 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 191
>gi|225683333|gb|EEH21617.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1074
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/614 (68%), Positives = 493/614 (80%), Gaps = 9/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W V
Sbjct: 289 LKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGEL-RPKWDGV 347
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP D H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 348 GYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDE 407
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV +R +P++F PGLP+LN+SQ AVKSVLQ+P+SLIQGPP
Sbjct: 408 MSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKPLSLIQGPP 467
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 468 GTGKTVTSANIIYHLAKINGGQVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVES 527
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QV + D++ EL KL QLK E GELSS DEKKYK L RA EREI +ADV
Sbjct: 528 PVGFLSLHEQVHNNDSN--IELVKLNQLKAELGELSSQDEKKYKQLVRAAEREILSNADV 585
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 586 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 645
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FY+G+LQNGVT +ER
Sbjct: 646 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLL 705
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 706 KDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGI 765
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++LYKEIEVASVD+FQGREKDYI+LSCVRSN+HQGIGF
Sbjct: 766 ITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGF 825
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S+VQ
Sbjct: 826 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQ 885
Query: 835 FQKPKKIYNDRRLF 848
F +PK+ Y + F
Sbjct: 886 FSRPKQAYRGPQRF 899
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 91/118 (77%), Gaps = 3/118 (2%)
Query: 137 KADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHK 196
+ + H+C YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH
Sbjct: 83 EKELPSHSCAYCGIHNPSSVVKC--LTCTKWFCSARGNTSSSHIVNHLVRARHKEVQLHP 140
Query: 197 DSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
+S LG+TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 141 ESSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 197
>gi|157130590|ref|XP_001661931.1| nonsense-mediated mrna decay protein 1 (rent1) [Aedes aegypti]
gi|108871854|gb|EAT36079.1| AAEL011817-PA [Aedes aegypti]
Length = 1121
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/697 (60%), Positives = 518/697 (74%), Gaps = 32/697 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ IRWD GLN+K +AYF K D +++L+ GDELRLRY+G+ H W VG
Sbjct: 307 LKESQTQENIEIRWDTGLNRKTIAYFTLAKNDGDMKLMHGDELRLRYTGEL-HKPWSCVG 365
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ E+V LEL+ + P++ F+VDF+WK TSFDRMQ A++ FAVD+ SVS
Sbjct: 366 HVIKVPDNYGEDVGLELKHNHQAPIECTSNFAVDFIWKGTSFDRMQMALRKFAVDDNSVS 425
Query: 359 GYIYHHLLGH-----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGP 413
YIY LLGH +V N LP+ F AP LP+LN SQV+AVK LQRP+SLIQGP
Sbjct: 426 NYIYSRLLGHGRADGSDDVTFRINNLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGP 485
Query: 414 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS 473
PGTGKTVTSA IVY + + G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+
Sbjct: 486 PGTGKTVTSATIVYQLVRLNGGPVLVCAPSNTAVDQLTEKIHRTSLKVVRVCAKSREAIE 545
Query: 474 SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
SPV L LH Q+R+++ + S+L KLQQLKDE GELSSSDEK+Y++LK+ ERE+ ++AD
Sbjct: 546 SPVSFLALHNQIRNME--QNSDLKKLQQLKDETGELSSSDEKRYRSLKKQAERELLEAAD 603
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM 593
VICCTCVGAGDPRL +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+M
Sbjct: 604 VICCTCVGAGDPRLQRIKFSSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVM 663
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
CKKAA+AGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV ER+
Sbjct: 664 CKKAAKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERK 723
Query: 654 SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
+DFPWP P+ PMFF V GQEEI+ SGTSYLNRTEA+NVEKI T FL++GV P QIG
Sbjct: 724 LK-VDFPWPSPDTPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPDQIG 782
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
+ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNEHQGIG
Sbjct: 783 IITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIG 842
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
FLNDPRRLNVALTRA+YGI+I+GNPKVLSKQ LWN LL YK+ + LVEG LNNLK+SM+
Sbjct: 843 FLNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDKKVLVEGSLNNLKESMI 902
Query: 834 QFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHP 893
QF KPKKI N + P +N D + + GY G H
Sbjct: 903 QFTKPKKIVNT----------LNPGSHFMNNTMYDAKDT---GYFERG-----HGSAFSG 944
Query: 894 AGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAV 930
+ F P P+ GP +QP + SR H P+ +
Sbjct: 945 SSFGNPG-PIGSMMNGPRNQPLDMFSR--THDPISYI 978
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 112/183 (61%), Gaps = 18/183 (9%)
Query: 101 RGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCN 160
R S + I + L FEE DD + HACRYCG+ P+ VV CN
Sbjct: 69 RRLGGSDKVKVAGITSAIGELQFEEDEDDPVA---QSQELPPHACRYCGIHEPSTVVMCN 125
Query: 161 VPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGF 220
+ C+KWFCN RG+TSGSHIVNHLVRAKH+EV LH D PLGET+LECY+CG RNVF+LGF
Sbjct: 126 I--CKKWFCNGRGSTSGSHIVNHLVRAKHREVTLHGDGPLGETVLECYSCGVRNVFVLGF 183
Query: 221 ISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVA--YFVF-----PKEDN 273
I AK +SVVVLLCR+PC ++ KD + WD K +A F+F P E
Sbjct: 184 IPAKADSVVVLLCRQPC---AAQNSIKD---MNWDQEQWKPLIADRCFLFWLVKVPTEQE 237
Query: 274 ELR 276
+LR
Sbjct: 238 QLR 240
>gi|295657686|ref|XP_002789409.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283831|gb|EEH39397.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1087
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/608 (68%), Positives = 491/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W V
Sbjct: 283 LKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGEL-RPKWDGV 341
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP D H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 342 GYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDE 401
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV +R +P++F PGLP+LN+SQ AVKSVLQ+P+SLIQGPP
Sbjct: 402 MSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKPLSLIQGPP 461
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 462 GTGKTVTSANIIYHLAKINGGQVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVES 521
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QV + D++ EL KL QLK E GELSS DEKKYK L RA E+EI +ADV
Sbjct: 522 PVGFLSLHEQVHNNDSN--IELVKLNQLKAELGELSSQDEKKYKQLVRAAEKEILSNADV 579
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 580 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 639
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FY+G+LQNGVT +ER
Sbjct: 640 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLL 699
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 700 KDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGI 759
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++LYKEIEVASVD+FQGREKDYI+LSCVRSN+HQGIGF
Sbjct: 760 ITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGF 819
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S+VQ
Sbjct: 820 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQ 879
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 880 FSRPKQAY 887
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 89/112 (79%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
H+C YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH +S LG+
Sbjct: 83 HSCAYCGIHNPSSVVKC--LTCTKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESSLGD 140
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 141 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 191
>gi|330918442|ref|XP_003298225.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
gi|311328707|gb|EFQ93678.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
Length = 1079
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/608 (68%), Positives = 488/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+DN+ +RWD+ LN K A F+ PK E +++L GDE+RLRY+G+ P W+ V
Sbjct: 285 LKESQSQDNLVVRWDMALNNKHTASFILPKLELGDVKLAVGDEMRLRYTGEL-RPHWEGV 343
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP + H FS D+VWK+TSFDRMQ AMKTFA+DE
Sbjct: 344 GYVIKIPNNQSDEVTIELRTKGDHKSVPTECTHNFSADYVWKATSFDRMQHAMKTFAIDE 403
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +PR+F PGLPELNASQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 404 MSVSGYIFHRLLGHEVAAAPMKIQIPRKFSVPGLPELNASQINAVKSVLQKPLSLIQGPP 463
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+ K Q QVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 464 GTGKTVTSATIIYHLCKISQSQVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVES 523
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR DT+ EL+KL QLK + GELSS DEKK+K L RA EREI +ADV
Sbjct: 524 PVGFLSLHEQVRMNDTN--VELNKLNQLKSDVGELSSQDEKKFKQLTRAAEREILMAADV 581
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 582 ICCTCVGAGDPRLSKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 641
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA AGL QSLFERLV+LG PIRLQVQYRMHP LSEFPSN FYEG+LQNGVT+ ER
Sbjct: 642 KKAATAGLNQSLFERLVILGCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIR 701
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 702 RDVDFPWPVVDSPMMFWSNLGAEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPGDIGI 761
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G+ +++ YKE+EVASVD+FQGREKD+IILSCVRSNEHQGIGF
Sbjct: 762 ITPYEGQRSYVVSSMQATGSFKKENYKEVEVASVDAFQGREKDFIILSCVRSNEHQGIGF 821
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LL H+KE CLVEGPL NL+ S++Q
Sbjct: 822 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLTNLQVSLLQ 881
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 882 FSRPKQTY 889
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 107/173 (61%), Gaps = 17/173 (9%)
Query: 134 EYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVC 193
E + + HAC YCG+ N VV+C +C KWFC++RGN+S SHI+NHLVRA+HKEV
Sbjct: 76 EDAEVELPAHACAYCGIHNAGSVVKC--LACSKWFCSARGNSSSSHIINHLVRARHKEVQ 133
Query: 194 LHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNV-TI 252
LH S LG+T LECYNCG +NVFLLGFI AK+++VVVLLCR+PC M SQ N T
Sbjct: 134 LHPASSLGDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAM--PSQKDMNWDTS 191
Query: 253 RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKL 305
RW + + ++ P P D+ +LR A H Q++ + +L
Sbjct: 192 RWQPLIEDRSFLPWLVP--------APTDQEQLR----ARHLTPQTIAKLEEL 232
>gi|350629790|gb|EHA18163.1| hypothetical protein ASPNIDRAFT_119246 [Aspergillus niger ATCC
1015]
Length = 1071
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/614 (67%), Positives = 491/614 (79%), Gaps = 9/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 264 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 322
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+VD+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 323 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTVDYVWKSTSFDRMQLAMKTFAVDE 382
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 383 MSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRPLSLIQGPP 442
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 443 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 502
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR DT+ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 503 PVGFLSLHEQVRINDTN--IELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADV 560
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 561 ICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 620
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNG++ ER
Sbjct: 621 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLR 680
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 681 RDVDFPWPIADNPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGI 740
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NG +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 741 ITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 800
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+ ILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 801 LSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQ 860
Query: 835 FQKPKKIYNDRRLF 848
F +PK+ Y + F
Sbjct: 861 FSRPKQAYRGPQRF 874
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 64 HACAYCGIHNPSSVVKC--LACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLGD 121
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 122 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 172
>gi|258570655|ref|XP_002544131.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
gi|237904401|gb|EEP78802.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
Length = 1075
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/614 (66%), Positives = 496/614 (80%), Gaps = 9/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + ++WD+GLN K +A FV PK E +++L GDE+R++YSG+ W+ V
Sbjct: 268 LKEAQSQDGLIVKWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRIKYSGELRQ-KWEGV 326
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+V+K+ +EV +ELR + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 327 GYVVKIPNNQSDEVTIELRTKGDHKSVPTECTHNFTADYVWKSTSFDRMQTAMKTFAVDE 386
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG EV ++ LP++F APGLP LN SQV AVK+VLQ+P+SLIQGPP
Sbjct: 387 MSVSGYIFHRLLGSEVAAAPMKTQLPKKFTAPGLPGLNPSQVNAVKAVLQKPLSLIQGPP 446
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA ++YH+AK GQVLVCAPSNVAVDQL E I TGLK VR+ AKSRE V S
Sbjct: 447 GTGKTVTSATVIYHLAKLTGGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVES 506
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV HL+LH QVR+ D++ EL KL QLK+E GELSS DEKK+K L RA E+EI +ADV
Sbjct: 507 PVRHLSLHEQVRNNDSN--VELMKLTQLKNELGELSSQDEKKFKQLTRAAEKEILTNADV 564
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ++EPEC+IPLV+G KQVVLVGDH QLGPVIM
Sbjct: 565 ICCTCVGAGDPRLAKFKFRTVLIDESTQSSEPECMIPLVMGCKQVVLVGDHLQLGPVIMN 624
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS FPSN FY+G+LQNGVT ++R
Sbjct: 625 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSSFPSNMFYDGSLQNGVTSDDRLL 684
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ ++PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 685 KDVDFPWPISDKPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSAIGI 744
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M NG +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 745 ITPYEGQRSYVVSSMQLNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 804
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE +CLVEGPL+NL+ S+VQ
Sbjct: 805 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQDCLVEGPLSNLQTSLVQ 864
Query: 835 FQKPKKIYNDRRLF 848
F +PK+ Y + F
Sbjct: 865 FSRPKQAYRGPQRF 878
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 86/116 (74%), Gaps = 8/116 (6%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ N VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH S G+
Sbjct: 68 HACCYCGIHNTNSVVKC--LACNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASAAGD 125
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGL 258
T+LECYNCG RNVFLLGFI AK+++VVVLLCR+PC M SKD + WD L
Sbjct: 126 TVLECYNCGTRNVFLLGFIPAKSDTVVVLLCRQPCAAM---PSSKD---MNWDTSL 175
>gi|119495335|ref|XP_001264454.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
gi|119412616|gb|EAW22557.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
Length = 1079
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/608 (68%), Positives = 490/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 271 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 329
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 330 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDE 389
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ LP++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 390 MSVSGYIFHRLLGHEVAAAPMKTQLPKKFSVPGLPELNGSQINAVKSVLQRPMSLIQGPP 449
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 450 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 509
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR D++ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 510 PVGFLSLHEQVRLNDSN--IELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADV 567
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 568 ICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 627
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNGV+ +R
Sbjct: 628 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLR 687
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P+ IG+
Sbjct: 688 RDVDFPWPVVDSPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPADIGI 747
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NG +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 748 ITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 807
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 808 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQ 867
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 868 FSRPKQSY 875
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 71 HACAYCGIHNPSSVVKC--LACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLGD 128
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 129 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 179
>gi|70995842|ref|XP_752676.1| regulator of nonsense transcripts [Aspergillus fumigatus Af293]
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus]
gi|66850311|gb|EAL90638.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
Af293]
gi|159131430|gb|EDP56543.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
A1163]
Length = 1079
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/608 (68%), Positives = 490/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 271 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 329
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 330 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDE 389
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ LP++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 390 MSVSGYIFHRLLGHEVAAAPMKTQLPKKFSVPGLPELNGSQINAVKSVLQRPMSLIQGPP 449
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 450 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 509
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR D++ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 510 PVGFLSLHEQVRLNDSN--IELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADV 567
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 568 ICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 627
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNGV+ +R
Sbjct: 628 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLR 687
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P+ IG+
Sbjct: 688 RDVDFPWPVVDSPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPADIGI 747
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NG +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 748 ITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 807
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 808 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQ 867
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 868 FSRPKQSY 875
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 71 HACAYCGIHNPSSVVKC--LACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLGD 128
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 129 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 179
>gi|225558219|gb|EEH06503.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus G186AR]
gi|240277173|gb|EER40682.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H143]
Length = 1071
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/608 (68%), Positives = 491/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W V
Sbjct: 267 LKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGEL-RPKWDGV 325
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP D H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 326 GYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDE 385
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV +R +P++F PGLP+LN+SQ AVKSVLQ+P+SLIQGPP
Sbjct: 386 MSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKPLSLIQGPP 445
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+Y++AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 446 GTGKTVTSANIIYNLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 505
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QV + D++ EL KL QLK E GELSS DEKK+K L RA E+EI +ADV
Sbjct: 506 PVGFLSLHEQVHNNDSN--IELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADV 563
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 564 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 623
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FY+G+LQNGVT +ER
Sbjct: 624 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLL 683
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 684 KDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGI 743
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++LYKEIEVASVD+FQGREKDYI+LSCVRSN+HQGIGF
Sbjct: 744 ITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGF 803
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S+VQ
Sbjct: 804 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQ 863
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 864 FSRPKQAY 871
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 69/86 (80%), Gaps = 1/86 (1%)
Query: 169 CNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESV 228
C +RGNTS SHIVNHLVRA+HKEV LH +S LG+TILECYNCG +NVFLLGFI AK+++V
Sbjct: 91 CAARGNTSSSHIVNHLVRARHKEVQLHPESSLGDTILECYNCGTKNVFLLGFIPAKSDTV 150
Query: 229 VVLLCREPCLNMMKESQSKDNVTIRW 254
VVLLCR+PC M S+ + T RW
Sbjct: 151 VVLLCRQPCA-AMPSSKDMNWDTSRW 175
>gi|396485880|ref|XP_003842280.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
gi|312218856|emb|CBX98801.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
Length = 1080
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/608 (67%), Positives = 489/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+DN+ +RWD+ LN K A F+ PK E +++L GDE+RLRY+G+ P W+ V
Sbjct: 285 LKESQSQDNLVVRWDMALNNKHTASFILPKLELGDVKLAVGDEMRLRYTGEL-RPHWEGV 343
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP + H FS D+VWK+TSFDRMQ AMKTFA+DE
Sbjct: 344 GYVIKIPNNQSDEVTIELRTKGDHKSVPTECTHNFSADYVWKATSFDRMQHAMKTFAIDE 403
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ ++PR+F PGLPELNASQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 404 MSVSGYIFHRLLGHEVASAPMKISIPRKFSVPGLPELNASQINAVKSVLQKPLSLIQGPP 463
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+ K QVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 464 GTGKTVTSATIIYHLCKISGSQVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVES 523
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR DT+ EL+KL QLK + GELSS DEKK+K L RA EREI +ADV
Sbjct: 524 PVGFLSLHEQVRMNDTN--VELNKLNQLKSDVGELSSQDEKKFKQLTRAAEREILNAADV 581
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 582 ICCTCVGAGDPRLSKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 641
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA AGL QSLFERLV+LG PIRLQVQYRMHP LSEFPSN FYEG+LQNGVT+ ER
Sbjct: 642 KKAATAGLNQSLFERLVILGCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIR 701
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV PS IG+
Sbjct: 702 RDVDFPWPVVDSPMMFWSNLGVEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPSDIGI 761
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G+ +++ YKE+EVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 762 ITPYEGQRSYVVSSMQATGSFKKENYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGF 821
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LL H+KE CLVEGPL NL+ S++Q
Sbjct: 822 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLTNLQVSLLQ 881
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 882 FSRPKQTY 889
Score = 153 bits (386), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 108/173 (62%), Gaps = 17/173 (9%)
Query: 134 EYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVC 193
E + + HAC YCG+ N VV+C +C KWFC++RGN+S SHI+NHLVRA+HKEV
Sbjct: 76 EDAEVELPSHACAYCGIHNAGSVVKC--LACSKWFCSARGNSSSSHIINHLVRARHKEVQ 133
Query: 194 LHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNV-TI 252
LH S LG+T LECYNCG +NVFLLGFI AK+++VVVLLCR+PC M SQ N T
Sbjct: 134 LHPASSLGDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAM--PSQKDMNWDTS 191
Query: 253 RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKL 305
RW + + ++ P P D+ +LR A H + Q++ + +L
Sbjct: 192 RWQPLIEDRSFLPWLVP--------APTDQEQLR----ARHLSPQTIAKLEEL 232
>gi|115491919|ref|XP_001210587.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
gi|114197447|gb|EAU39147.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
Length = 1072
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/614 (67%), Positives = 490/614 (79%), Gaps = 9/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 264 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 322
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 323 GYVIKIPNNQSDEVTIELRAKGDHKAVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDE 382
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 383 MSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRPLSLIQGPP 442
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 443 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 502
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR D++ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 503 PVGFLSLHEQVRLNDSN--IELMKLNQLKSELGELSSQDEKRLKQLTRSAEREILNNADV 560
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 561 ICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 620
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNG++ ER
Sbjct: 621 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLR 680
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 681 RDVDFPWPIMDNPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGI 740
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NG +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 741 ITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 800
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+ ILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 801 LSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQ 860
Query: 835 FQKPKKIYNDRRLF 848
F +PK+ Y + F
Sbjct: 861 FSRPKQAYRGPQRF 874
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C SC KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 64 HACAYCGIHNPSSVVKC--LSCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLGD 121
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 122 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 172
>gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus]
Length = 1060
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/608 (68%), Positives = 490/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 252 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 310
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 311 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDE 370
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ LP++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 371 MSVSGYIFHRLLGHEVAAAPMKTQLPKKFSVPGLPELNGSQINAVKSVLQRPMSLIQGPP 430
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 431 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 490
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR D++ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 491 PVGFLSLHEQVRLNDSN--IELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADV 548
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 549 ICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 608
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNGV+ +R
Sbjct: 609 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLR 668
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P+ IG+
Sbjct: 669 RDVDFPWPVVDSPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPADIGI 728
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NG +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 729 ITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 788
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 789 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQ 848
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 849 FSRPKQSY 856
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 52 HACAYCGIHNPSSVVKC--LACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLGD 109
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 110 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 160
>gi|145240145|ref|XP_001392719.1| regulator of nonsense transcripts 1 [Aspergillus niger CBS 513.88]
gi|134077233|emb|CAK45574.1| unnamed protein product [Aspergillus niger]
Length = 1072
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/614 (67%), Positives = 490/614 (79%), Gaps = 9/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 264 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 322
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 323 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDE 382
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 383 MSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRPLSLIQGPP 442
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 443 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 502
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR DT+ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 503 PVGFLSLHEQVRINDTN--IELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADV 560
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 561 ICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 620
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNG++ ER
Sbjct: 621 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLR 680
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 681 RDVDFPWPIADNPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGI 740
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NG +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 741 ITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 800
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+ ILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 801 LSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQ 860
Query: 835 FQKPKKIYNDRRLF 848
F +PK+ Y + F
Sbjct: 861 FSRPKQAYRGPQRF 874
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 64 HACAYCGIHNPSSVVKC--LACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLGD 121
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 122 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 172
>gi|121701377|ref|XP_001268953.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
gi|119397096|gb|EAW07527.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
Length = 1079
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/608 (68%), Positives = 489/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+YSG+ P W+ V
Sbjct: 271 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYSGEL-RPKWEGV 329
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 330 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDE 389
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ LP++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 390 MSVSGYIFHRLLGHEVAAAPMKTQLPKKFSVPGLPELNGSQINAVKSVLQRPMSLIQGPP 449
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 450 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 509
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR D++ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 510 PVGFLSLHEQVRLNDSN--IELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADV 567
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 568 ICCTCVGAGDPRLSKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 627
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS+FPSN FYEG+LQNGV+ +R
Sbjct: 628 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSQFPSNMFYEGSLQNGVSAIDRLR 687
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 688 RDVDFPWPVVDSPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVHPQDIGI 747
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NG +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 748 ITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 807
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 808 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKEQHCLVEGPLSNLQESLIQ 867
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 868 FSRPKQAY 875
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 92/124 (74%), Gaps = 3/124 (2%)
Query: 131 EGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHK 190
EG + + HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HK
Sbjct: 59 EGHAEEEKELPPHACAYCGIHNPSSVVKC--LACSKWFCSARGNTSSSHIVNHLVRARHK 116
Query: 191 EVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNV 250
EV LH S LG+TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ +
Sbjct: 117 EVQLHPGSSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWD 175
Query: 251 TIRW 254
T RW
Sbjct: 176 TSRW 179
>gi|358371937|dbj|GAA88543.1| regulator of nonsense transcripts [Aspergillus kawachii IFO 4308]
Length = 1072
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/614 (67%), Positives = 490/614 (79%), Gaps = 9/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 264 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 322
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 323 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDE 382
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 383 MSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRPLSLIQGPP 442
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 443 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 502
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR DT+ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 503 PVGFLSLHEQVRINDTN--IELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADV 560
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 561 ICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 620
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNG++ ER
Sbjct: 621 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLR 680
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 681 RDVDFPWPIADNPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGI 740
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NG +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 741 ITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 800
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+ ILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 801 LSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQ 860
Query: 835 FQKPKKIYNDRRLF 848
F +PK+ Y + F
Sbjct: 861 FSRPKQAYRGPQRF 874
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 64 HACAYCGIHNPSSVVKC--LACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLGD 121
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 122 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 172
>gi|189207819|ref|XP_001940243.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976336|gb|EDU42962.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1079
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/608 (67%), Positives = 488/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+DN+ +RWD+ LN K A F+ PK E +++L GDE+RLRY+G+ P W+ V
Sbjct: 285 LKESQSQDNLIVRWDMALNNKHTASFILPKLELGDVKLAVGDEMRLRYTGEL-RPHWEGV 343
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP + H FS D+VWK+TSFDRMQ AMKTFA+DE
Sbjct: 344 GYVIKIPNNQSDEVTIELRTKGDHKSVPTECTHNFSADYVWKATSFDRMQHAMKTFAIDE 403
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +PR+F PGLPELNASQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 404 MSVSGYIFHRLLGHEVAAAPMKIQIPRKFSVPGLPELNASQINAVKSVLQKPLSLIQGPP 463
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+ K Q QVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 464 GTGKTVTSATIIYHLCKISQSQVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVES 523
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR DT+ EL+KL QLK + GELSS DEKK+K L RA EREI +ADV
Sbjct: 524 PVGFLSLHEQVRMNDTN--VELNKLNQLKSDVGELSSQDEKKFKQLTRAAEREILMAADV 581
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 582 ICCTCVGAGDPRLSKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 641
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA AGL QSLFERLV+LG PIRLQVQYRMHP LSEFPSN FYEG+LQNGVT+ ER
Sbjct: 642 KKAATAGLNQSLFERLVILGCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIR 701
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 702 RDVDFPWPVVDSPMMFWSNLGAEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPGDIGI 761
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G+ +++ YKE+EVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 762 ITPYEGQRSYVVSSMQATGSFKKENYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGF 821
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LL H+KE CLVEGPL NL+ S++Q
Sbjct: 822 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLTNLQVSLLQ 881
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 882 FSRPKQTY 889
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 108/173 (62%), Gaps = 17/173 (9%)
Query: 134 EYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVC 193
E + + HAC YCG+ N VV+C +C KWFC++RGN+S SHI+NHLVRA+HKEV
Sbjct: 76 EDAEVELPAHACAYCGIHNAGSVVKC--LACSKWFCSARGNSSSSHIINHLVRARHKEVQ 133
Query: 194 LHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNV-TI 252
LH S LG+T LECYNCG +NVFLLGFI AK+++VVVLLCR+PC M SQ N T
Sbjct: 134 LHPASSLGDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAM--PSQKDMNWDTS 191
Query: 253 RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKL 305
RW + + ++ P P D+ +LR A H + Q++ + +L
Sbjct: 192 RWQPLIEDRSFLPWLVP--------APTDQEQLR----ARHLSPQTIAKLEEL 232
>gi|302505946|ref|XP_003014930.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
gi|291178501|gb|EFE34290.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
Length = 1080
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/608 (67%), Positives = 493/608 (81%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D +T+RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 271 LKEAQSQDGLTVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYAGEL-RPKWEGV 329
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR+ + VP +I+H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 330 GYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVWKATSFDRMQLAMKTFAVDE 389
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV ++ +P++F PGLP LN+SQ+ AVK+VLQ+P+SLIQGPP
Sbjct: 390 MSVSGYIFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKPLSLIQGPP 449
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E I TGLK VR+ AKSRE V S
Sbjct: 450 GTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVES 509
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV HL+LH QVR+ D++ EL KL QLK E GELSS DEKKYK L RA E+EI +ADV
Sbjct: 510 PVRHLSLHEQVRNNDSN--IELVKLNQLKTELGELSSQDEKKYKQLTRAAEKEILTNADV 567
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQ VLVGDH QLGPVIM
Sbjct: 568 ICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMN 627
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS+F SN FYEG+LQNGV+ +R
Sbjct: 628 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLL 687
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV ++PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 688 KNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGI 747
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 748 ITPYEGQRSYVVSSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 807
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S++Q
Sbjct: 808 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQ 867
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 868 FSRPKQAY 875
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Query: 169 CNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESV 228
C +RGNTS SHIVNHLVRA+HKEV LH S LG+TILECYNCG +NVFLLGFI AK+++V
Sbjct: 95 CGARGNTSSSHIVNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTV 154
Query: 229 VVLLCREPCLNMMKESQSKDNVTIRW 254
VVLLCR+PC M S+ + T RW
Sbjct: 155 VVLLCRQPCA-AMPSSKDMNWDTSRW 179
>gi|154285820|ref|XP_001543705.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
gi|150407346|gb|EDN02887.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
Length = 1088
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/608 (68%), Positives = 491/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W V
Sbjct: 284 LKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGEL-RPKWDGV 342
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP D H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 343 GYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDE 402
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV +R +P++F PGLP+LN+SQ AVKSVLQ+P+SLIQGPP
Sbjct: 403 MSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKPLSLIQGPP 462
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+Y++AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 463 GTGKTVTSANIIYNLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 522
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QV + D++ EL KL QLK E GELSS DEKK+K L RA E+EI +ADV
Sbjct: 523 PVGFLSLHEQVHNNDSN--IELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADV 580
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 581 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 640
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FY+G+LQNGVT +ER
Sbjct: 641 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLL 700
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 701 KDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGI 760
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++LYKEIEVASVD+FQGREKDYI+LSCVRSN+HQGIGF
Sbjct: 761 ITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGF 820
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S+VQ
Sbjct: 821 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQ 880
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 881 FSRPKQAY 888
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
H+C YCG+ NP VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH +S LG+
Sbjct: 84 HSCAYCGIHNPGTVVKC--LTCTKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESSLGD 141
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 142 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 192
>gi|315049715|ref|XP_003174232.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
gi|311342199|gb|EFR01402.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
Length = 1094
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/608 (67%), Positives = 493/608 (81%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D +T+RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 285 LKEAQSQDGLTVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYAGEL-RPKWEGV 343
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR+ + VP +I+H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 344 GYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVWKATSFDRMQLAMKTFAVDE 403
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV ++ +P++F PGLP LN+SQ+ AVK+VLQ+P+SLIQGPP
Sbjct: 404 MSVSGYIFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKPLSLIQGPP 463
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E I TGLK VR+ AKSRE V S
Sbjct: 464 GTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVES 523
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV HL+LH QVR+ D++ EL KL QLK E GELSS DEKKYK L RA E+EI +ADV
Sbjct: 524 PVRHLSLHEQVRNNDSN--IELVKLNQLKTELGELSSQDEKKYKQLTRAAEKEILTNADV 581
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQ VLVGDH QLGPVIM
Sbjct: 582 ICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMN 641
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS+F SN FYEG+LQNGV+ +R
Sbjct: 642 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLL 701
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV ++PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 702 KNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGI 761
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 762 ITPYEGQRSYVVSSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 821
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S++Q
Sbjct: 822 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQ 881
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 882 FSRPKQAY 889
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 90/140 (64%), Gaps = 11/140 (7%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
+E MA ++ G + + HAC VV+C +C KWFC++RGN
Sbjct: 65 LESMASVAIGGAGKTQASKTEEEKELPAHAC--------GSVVKC--LTCNKWFCSARGN 114
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
TS SHIVNHLVRA+HKEV LH S LG+TILECYNCG +NVFLLGFI AK+++VVVLLCR
Sbjct: 115 TSSSHIVNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCR 174
Query: 235 EPCLNMMKESQSKDNVTIRW 254
+PC M S+ + T RW
Sbjct: 175 QPCA-AMPSSKDMNWDTSRW 193
>gi|327293656|ref|XP_003231524.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326466152|gb|EGD91605.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1093
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/608 (67%), Positives = 493/608 (81%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D +T+RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 284 LKEAQSQDGLTVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYAGEL-RPKWEGV 342
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR+ + VP +I+H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 343 GYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVWKATSFDRMQLAMKTFAVDE 402
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV ++ +P++F PGLP LN+SQ+ AVK+VLQ+P+SLIQGPP
Sbjct: 403 MSVSGYIFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKPLSLIQGPP 462
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E I TGLK VR+ AKSRE V S
Sbjct: 463 GTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVES 522
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV HL+LH QVR+ D++ EL KL QLK E GELSS DEKKYK L RA E+EI +ADV
Sbjct: 523 PVRHLSLHEQVRNNDSN--IELVKLNQLKTELGELSSQDEKKYKQLTRAAEKEILTNADV 580
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQ VLVGDH QLGPVIM
Sbjct: 581 ICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMN 640
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS+F SN FYEG+LQNGV+ +R
Sbjct: 641 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLL 700
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV ++PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 701 KNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGI 760
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 761 ITPYEGQRSYVVSSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 820
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S++Q
Sbjct: 821 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQ 880
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 881 FSRPKQAY 888
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 91/141 (64%), Gaps = 17/141 (12%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
+E MA ++ + G + + HAC VV+C +C KWFC++RGN
Sbjct: 65 LESMASVAVDGAGKPQASKTEEEKELPAHAC---------GVVKC--LTCNKWFCSARGN 113
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
TS SHIVNHLVRA+HKEV LH S LG+TILECYNCG +NVFLLGFI AK+++VVVLLCR
Sbjct: 114 TSSSHIVNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCR 173
Query: 235 EPCLNMMKESQSKDNVTIRWD 255
+PC M SKD + WD
Sbjct: 174 QPCAAM---PSSKD---MNWD 188
>gi|302660352|ref|XP_003021856.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
gi|291185774|gb|EFE41238.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
Length = 1080
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/608 (67%), Positives = 493/608 (81%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D +T+RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 271 LKEAQSQDGLTVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYAGEL-RPKWEGV 329
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR+ + VP +I+H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 330 GYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVWKATSFDRMQLAMKTFAVDE 389
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV ++ +P++F PGLP LN+SQ+ AVK+VLQ+P+SLIQGPP
Sbjct: 390 MSVSGYIFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKPLSLIQGPP 449
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E I TGLK VR+ AKSRE V S
Sbjct: 450 GTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVES 509
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV HL+LH QVR+ D++ EL KL QLK E GELSS DEKKYK L RA E+EI +ADV
Sbjct: 510 PVRHLSLHEQVRNNDSN--IELVKLNQLKTELGELSSQDEKKYKQLTRAAEKEILTNADV 567
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQ VLVGDH QLGPVIM
Sbjct: 568 ICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMN 627
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS+F SN FYEG+LQNGV+ +R
Sbjct: 628 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLL 687
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV ++PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 688 KNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGI 747
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 748 ITPYEGQRSYVVSSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 807
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S++Q
Sbjct: 808 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQ 867
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 868 FSRPKQAY 875
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Query: 169 CNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESV 228
C +RGNTS SHIVNHLVRA+HKEV LH S LG+TILECYNCG +NVFLLGFI AK+++V
Sbjct: 95 CGARGNTSSSHIVNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTV 154
Query: 229 VVLLCREPCLNMMKESQSKDNVTIRW 254
VVLLCR+PC M S+ + T RW
Sbjct: 155 VVLLCRQPCA-AMPSSKDMNWDTSRW 179
>gi|170053152|ref|XP_001862543.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
gi|167873798|gb|EDS37181.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
Length = 1136
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/610 (66%), Positives = 489/610 (80%), Gaps = 11/610 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ IRWD GLNKK +AYF K D +++L+ GDELRLRY+G+ H W VG
Sbjct: 319 LKESQTQENIEIRWDTGLNKKTIAYFTLAKNDGDMKLMHGDELRLRYNGEL-HKPWSCVG 377
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ E+V LEL+ + PV+ + F+VDF+WK TSFDRMQ A++ FAVD+ SVS
Sbjct: 378 HVIKVPDNYGEDVGLELKHNHQAPVECSSNFAVDFIWKGTSFDRMQMALRKFAVDDNSVS 437
Query: 359 GYIYHHLLGH-----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGP 413
YIY LLGH +V N LP+ F A LP+LN SQV+AVK LQRP+SLIQGP
Sbjct: 438 NYIYSRLLGHGRQDGSDDVTFRINNLPKHFSAANLPDLNRSQVYAVKHALQRPLSLIQGP 497
Query: 414 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS 473
PGTGKTVTSA IVY + + G +LVCAPSN AVDQL EKI T LKVVR+CAKSREA+
Sbjct: 498 PGTGKTVTSATIVYQLVRLNGGPILVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAID 557
Query: 474 SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
SPV L LH Q+R+++ + S+L KLQQLKDE GELSSSDEK+Y+ LK+ ERE+ ++AD
Sbjct: 558 SPVSFLALHNQIRNME--QNSDLKKLQQLKDETGELSSSDEKRYRMLKKQAERELLEAAD 615
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM 593
VICCTCVGAGDPRL +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+M
Sbjct: 616 VICCTCVGAGDPRLQRIKFSSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVM 675
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
CKKAA+AGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV ER+
Sbjct: 676 CKKAAKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERK 735
Query: 654 SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
+DFPWP P+ PMFF V GQEEI+ SGTSYLNRTEA+NVEKI T FL++GV P QIG
Sbjct: 736 LK-VDFPWPSPDTPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPEQIG 794
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
+ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNEHQGIG
Sbjct: 795 IITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIG 854
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
FLNDPRRLNVALTRA+YGI+I+GNPKVLSKQ LWN LL YK+ + LVEG LNNLK+SM+
Sbjct: 855 FLNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDKKVLVEGSLNNLKESMI 914
Query: 834 QFQKPKKIYN 843
QF KPKKI N
Sbjct: 915 QFTKPKKIVN 924
Score = 176 bits (446), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 113/178 (63%), Gaps = 16/178 (8%)
Query: 106 SSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCR 165
S + + I + L FEE DD + D HACRYCG+ P+ VV CN+ C+
Sbjct: 84 SEASKIAGITSAIGELQFEEDEDD-GALGAQQQDLPPHACRYCGIHEPSTVVMCNI--CK 140
Query: 166 KWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKT 225
KWFCN RG+TSGSHIVNHLVRAKH+EV LH D PLGET+LECY+CG RNVF+LGFI AK
Sbjct: 141 KWFCNGRGSTSGSHIVNHLVRAKHREVTLHGDGPLGETVLECYSCGVRNVFVLGFIPAKA 200
Query: 226 ESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVA--YFVF-----PKEDNELR 276
+SVVVLLCR+PC ++ KD + WD K +A F+F P E +LR
Sbjct: 201 DSVVVLLCRQPC---AAQNSIKD---MNWDQEQWKPLIADRCFLFWLVKVPTEQEQLR 252
>gi|261201590|ref|XP_002628009.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239590106|gb|EEQ72687.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239611816|gb|EEQ88803.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ER-3]
gi|327352930|gb|EGE81787.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ATCC 18188]
Length = 1092
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/608 (68%), Positives = 491/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W V
Sbjct: 288 LKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGEL-RPKWDGV 346
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP D H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 347 GYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDE 406
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV +R +P++F PGLP+LN+SQ AVKSVLQ+P+SLIQGPP
Sbjct: 407 MSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKPLSLIQGPP 466
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+Y++AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 467 GTGKTVTSANIIYNLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 526
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QV + D++ EL KL QLK E GELSS DEKK+K L RA E+EI +ADV
Sbjct: 527 PVGFLSLHEQVHNNDSN--IELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADV 584
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 585 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 644
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FY+G+LQNGVT +ER
Sbjct: 645 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLL 704
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 705 KDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGI 764
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++LYKEIEVASVD+FQGREKDYI+LSCVRSN+HQGIGF
Sbjct: 765 ITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGF 824
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S+VQ
Sbjct: 825 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQ 884
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 885 FPRPKQAY 892
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 89/112 (79%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
H+C YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH +S LG+
Sbjct: 88 HSCAYCGIHNPSSVVKC--LTCTKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESSLGD 145
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 146 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 196
>gi|169763354|ref|XP_001727577.1| regulator of nonsense transcripts 1 [Aspergillus oryzae RIB40]
gi|238489245|ref|XP_002375860.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|83770605|dbj|BAE60738.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698248|gb|EED54588.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|391869636|gb|EIT78831.1| RNA helicase nonsense mRNA reducing factor [Aspergillus oryzae
3.042]
Length = 1072
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/608 (67%), Positives = 487/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 264 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 322
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 323 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDE 382
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 383 MSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRPLSLIQGPP 442
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 443 GTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 502
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR D++ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 503 PVGFLSLHEQVRLNDSN--IELLKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADV 560
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 561 ICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 620
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNG++ ER
Sbjct: 621 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLR 680
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 681 RDVDFPWPISDNPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPGDIGI 740
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 741 ITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 800
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+ ILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 801 LSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQ 860
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 861 FSRPKQAY 868
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C SC KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 64 HACAYCGIHNPSSVVKC--LSCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLGD 121
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 122 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRW 172
>gi|440632949|gb|ELR02868.1| regulator-nonsense transcripts 1 [Geomyces destructans 20631-21]
Length = 1099
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/668 (63%), Positives = 504/668 (75%), Gaps = 29/668 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + IRWD GLN K +A FV PK E +++L GDE+RL+Y G+ P W+ V
Sbjct: 296 LKEAQSEDGLVIRWDYGLNNKHLASFVLPKIELGDVKLAVGDEMRLKYKGEL-RPVWEGV 354
Query: 300 GHVIKL--TAQEEVALELRA---SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+V+K+ +EV +ELR + VP + H FS D+VWK+TS+DRMQ AMKTFAVDE
Sbjct: 355 GYVVKIPNNQSDEVTIELRKIGNDKSVPTECTHNFSADYVWKATSYDRMQLAMKTFAVDE 414
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 415 MSVSGYIFHKLLGHEVAAAPMKIQMPKKFSVPGLPELNGSQINAVKSVLQKPLSLIQGPP 474
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA ++YH++K GQVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 475 GTGKTVTSATVIYHLSKVNGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 534
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L+LH QVR D++ EL KL QLK E GELSS DEKK+K+L RA EREI +ADV
Sbjct: 535 SVGFLSLHEQVRMNDSN--LELTKLSQLKSELGELSSQDEKKFKSLTRAAEREILNNADV 592
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 593 ICCTCVGAGDPRLSKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 652
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LGL PIRL VQYRMHP LSEFPSN FYEG+LQNGVT+ +R
Sbjct: 653 KKAAKAGLNQSLFERLVILGLAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQQRLR 712
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEKIVT F ++GV P+ IGV
Sbjct: 713 RDVDFPWPVGDTPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQPADIGV 772
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 773 ITPYEGQRSYVVSSMQNTGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 832
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LL H+KE CLVEGPL NL+ S++Q
Sbjct: 833 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLQHFKERNCLVEGPLTNLQTSLLQ 892
Query: 835 FQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHPA 894
F +PK Y GP ST P+ R PPNG A
Sbjct: 893 FSRPKTTYR--------GPQRYQMSYSTGLPSNAR------------PPNGKTGNDYSDA 932
Query: 895 GFPMPRVP 902
G + +P
Sbjct: 933 GSMLGYIP 940
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 96/145 (66%), Gaps = 16/145 (11%)
Query: 112 SQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNS 171
S V+GM L D+ E HAC YCG+ +P+ VV+C C KWFC++
Sbjct: 73 SMAVDGMKSLGLRGVEDEKE--------LPAHACAYCGIHSPSSVVKC--LGCTKWFCSA 122
Query: 172 RGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVL 231
RGN S SHIVNHLVRA+HKEV LH S LG+T+LECYNCG +NVFLLGFI AK+++VVVL
Sbjct: 123 RGNASSSHIVNHLVRARHKEVQLHPQSTLGDTVLECYNCGTKNVFLLGFIPAKSDTVVVL 182
Query: 232 LCREPCLNMMKESQSKDNVTIRWDI 256
LCR+PC + SKD + WDI
Sbjct: 183 LCRQPCAST---PSSKD---MSWDI 201
>gi|328768162|gb|EGF78209.1| hypothetical protein BATDEDRAFT_35814 [Batrachochytrium
dendrobatidis JAM81]
Length = 1119
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/607 (67%), Positives = 491/607 (80%), Gaps = 6/607 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MKESQ++++V +RWD+GLN KR+A F PK E ++RL GDEL L+Y G+ H W+
Sbjct: 331 MKESQTQEDVVVRWDMGLNMKRIANFPLPKLELGDIRLAVGDELLLKYHGEL-HAKWEGA 389
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ +EV++EL+ PV+ H F+VDFVWKSTSFDRMQ AMKTFA+DE SV
Sbjct: 390 GHVIKIPNNISDEVSMELKHDDRAPVECTHNFTVDFVWKSTSFDRMQNAMKTFALDENSV 449
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
S YIYH LLGH+V+ Q+++ TLP+R AP LPELN SQ AVKSVL +P+SLIQGPPGTG
Sbjct: 450 SAYIYHRLLGHDVDPQVLKVTLPKRINAPNLPELNHSQATAVKSVLSKPLSLIQGPPGTG 509
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+A +GQVLVCAPSNVAVD L KI TGLKVVR+ AKSREA+ S V
Sbjct: 510 KTVTSATIVYHLANMNKGQVLVCAPSNVAVDHLTSKIHKTGLKVVRVTAKSREALESSVS 569
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
L+L QV++LDT +L KL +LK+E GELSS DEKKYK L R EREI + ADVIC
Sbjct: 570 FLSLSEQVKNLDTDR--QLQKLIRLKNELGELSSQDEKKYKYLFRKAEREILEHADVICT 627
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TC+GAGD RL+ F FR VL+DE+TQA EPECLIPLVLG+KQVVLVGDH QLGPV+ KKA
Sbjct: 628 TCMGAGDSRLSKFSFRSVLVDEATQACEPECLIPLVLGSKQVVLVGDHQQLGPVVQHKKA 687
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
++AGL+QSLFERL++LGL+PIRLQVQYRMHP LSEFPSN FYEG+LQNGVT+ ER I
Sbjct: 688 SKAGLSQSLFERLIILGLRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERIRPEI 747
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPV PM FY GQEEI+ASG SYLNRTEAA VEK+VT FL++GV P+QIG++TP
Sbjct: 748 DFPWPVHETPMIFYGSFGQEEIAASGKSYLNRTEAAYVEKVVTKFLKAGVTPAQIGIVTP 807
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQRAY+V +M NG+L+++LYKEIEVASVDSFQGREKDYII++CVRSNE+QGIGFL D
Sbjct: 808 YEGQRAYVVQHMQFNGSLKKELYKEIEVASVDSFQGREKDYIIVTCVRSNENQGIGFLVD 867
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRA+YG+VI+GNPKVL+K PLW LL ++EH CLVEG L+NLK M QFQK
Sbjct: 868 PRRLNVALTRAKYGLVIVGNPKVLAKHPLWYQLLMTFREHSCLVEGHLHNLKPLMTQFQK 927
Query: 838 PKKIYND 844
P++ Y++
Sbjct: 928 PRRGYSN 934
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 137/254 (53%), Gaps = 44/254 (17%)
Query: 24 FLEF-NTQG-ESDFDAYPEFRSPVSWPTPSDSLSVDPTTPVTPATPSDSRSAPPA----S 77
LEF +TQG + D+D Y PT + +++ T+ + S+ P + S
Sbjct: 9 LLEFQDTQGSQYDYDDYVVASQLSLPPTTTSNINGQMTSTGMDSLHDISQDYPLSLSSQS 68
Query: 78 DHH-----HHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEG 132
+HH H H H +H N +N T +I G F+ D V
Sbjct: 69 NHHGLVHPHSHGHAKHP---------------NGTNIDT-EISLGFYDPDFDLADDSVLE 112
Query: 133 FEY---------GKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNH 183
F + A+ HAC YCG+ N + VVRC +C KWFCN+RG ++GSHI+NH
Sbjct: 113 FNHPEQDQDQSETAAELPSHACSYCGIHNVSTVVRC--LTCSKWFCNARGQSNGSHIINH 170
Query: 184 LVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKE 243
LVRA+HKEV LH +S LG+TILECYNCGCRN+FLLGFI AK+++VVVLLCR+PC
Sbjct: 171 LVRARHKEVSLHSESALGDTILECYNCGCRNIFLLGFIPAKSDTVVVLLCRQPC------ 224
Query: 244 SQSKDNVTIRWDIG 257
+ + N WD+
Sbjct: 225 ASTPSNKDANWDLA 238
>gi|326469176|gb|EGD93185.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1064
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/614 (66%), Positives = 494/614 (80%), Gaps = 9/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 255 LKEAQSQDGLAVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYAGEL-RPKWEGV 313
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR+ + VP +I+H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 314 GYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVWKATSFDRMQLAMKTFAVDE 373
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV ++ +P++F PGLP LN+SQ+ AVK+VLQ+P+SLIQGPP
Sbjct: 374 MSVSGYIFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKPLSLIQGPP 433
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E I TGLK VR+ AKSRE V S
Sbjct: 434 GTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVES 493
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV HL+LH QVR+ D++ EL KL QLK E GELSS DEKKYK L RA E+EI +ADV
Sbjct: 494 PVRHLSLHEQVRNNDSN--IELVKLNQLKTELGELSSQDEKKYKQLTRAAEKEILTNADV 551
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQ VLVGDH QLGPVIM
Sbjct: 552 ICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMN 611
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS+F SN FYEG+LQNGV+ +R
Sbjct: 612 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLL 671
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV ++PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 672 KNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGI 731
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 732 ITPYEGQRSYVVSSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 791
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S++Q
Sbjct: 792 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQ 851
Query: 835 FQKPKKIYNDRRLF 848
F +PK+ Y + F
Sbjct: 852 FSRPKQAYRGPQRF 865
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
H A+HKEV LH S LG+TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC M
Sbjct: 93 HACGARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMP 151
Query: 243 ESQSKDNVTIRW 254
S+ + T RW
Sbjct: 152 SSKDMNWDTSRW 163
>gi|325093995|gb|EGC47305.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H88]
Length = 1071
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/608 (67%), Positives = 490/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W V
Sbjct: 267 LKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGEL-RPKWDGV 325
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP D H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 326 GYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDE 385
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV +R +P++F GLP+LN+SQ AVKSVLQ+P+SLIQGPP
Sbjct: 386 MSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVQGLPDLNSSQTNAVKSVLQKPLSLIQGPP 445
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+Y++AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 446 GTGKTVTSANIIYNLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 505
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QV + D++ EL KL QLK E GELSS DEKK+K L RA E+EI +ADV
Sbjct: 506 PVGFLSLHEQVHNNDSN--IELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADV 563
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 564 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 623
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FY+G+LQNGVT +ER
Sbjct: 624 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLL 683
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 684 KDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGI 743
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++LYKEIEVASVD+FQGREKDYI+LSCVRSN+HQGIGF
Sbjct: 744 ITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGF 803
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S+VQ
Sbjct: 804 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQ 863
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 864 FSRPKQAY 871
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 69/86 (80%), Gaps = 1/86 (1%)
Query: 169 CNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESV 228
C +RGNTS SHIVNHLVRA+HKEV LH +S LG+TILECYNCG +NVFLLGFI AK+++V
Sbjct: 91 CAARGNTSSSHIVNHLVRARHKEVQLHPESSLGDTILECYNCGTKNVFLLGFIPAKSDTV 150
Query: 229 VVLLCREPCLNMMKESQSKDNVTIRW 254
VVLLCR+PC M S+ + T RW
Sbjct: 151 VVLLCRQPCA-AMPSSKDMNWDTSRW 175
>gi|67516729|ref|XP_658250.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
gi|40745995|gb|EAA65151.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
Length = 1062
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/614 (67%), Positives = 490/614 (79%), Gaps = 9/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 254 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 312
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 313 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDE 372
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 373 MSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRPLSLIQGPP 432
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 433 GTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 492
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR D++ EL KL QLK E GELSS DEK+ K L RA EREI +ADV
Sbjct: 493 PVGFLSLHEQVRLNDSN--IELIKLNQLKSELGELSSQDEKRLKQLTRAAEREILNNADV 550
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 551 ICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 610
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNG+T +R
Sbjct: 611 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLR 670
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV P IG+
Sbjct: 671 REVDFPWPILDSPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKDIGI 730
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 731 ITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 790
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE LVEGPL+NL++S++Q
Sbjct: 791 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHTLVEGPLSNLQESLIQ 850
Query: 835 FQKPKKIYNDRRLF 848
F +PK+ Y + F
Sbjct: 851 FSRPKQAYRGPQRF 864
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 100/142 (70%), Gaps = 5/142 (3%)
Query: 137 KADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHK 196
+ + HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH
Sbjct: 48 EKELAPHACAYCGIHNPSSVVKC--LACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHP 105
Query: 197 DSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
+S LG+T+LECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 106 ESSLGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRWQP 164
Query: 257 GLNKKRVAYFVF--PKEDNELR 276
+ + ++ P + +LR
Sbjct: 165 LIEDRSFLTWLVAAPSDQEQLR 186
>gi|326479319|gb|EGE03329.1| hypothetical protein TEQG_02362 [Trichophyton equinum CBS 127.97]
Length = 1093
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/608 (67%), Positives = 492/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 284 LKEAQSQDGLAVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYAGEL-RPKWEGV 342
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR+ + VP +I+H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 343 GYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVWKATSFDRMQLAMKTFAVDE 402
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLG+EV ++ +P++F PGLP LN+SQ+ AVK+VLQ+P+SLIQGPP
Sbjct: 403 MSVSGYIFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKPLSLIQGPP 462
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E I TGLK VR+ AKSRE V S
Sbjct: 463 GTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVES 522
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV HL+LH QVR+ D++ EL KL QLK E GELSS DEKKYK L RA E+EI +ADV
Sbjct: 523 PVRHLSLHEQVRNNDSN--IELVKLNQLKTELGELSSQDEKKYKQLTRAAEKEILTNADV 580
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQ VLVGDH QLGPVIM
Sbjct: 581 ICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMN 640
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS+F SN FYEG+LQNGV+ +R
Sbjct: 641 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLL 700
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV ++PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 701 KNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGI 760
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 761 ITPYEGQRSYVVSSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 820
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S++Q
Sbjct: 821 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQ 880
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 881 FSRPKQAY 888
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 91/140 (65%), Gaps = 12/140 (8%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
+E MA ++ + G + + HAC VV+C +C KWFC++RGN
Sbjct: 65 LESMASVAVDGAGKPQASKTEEEKELPAHAC---------GVVKC--LTCNKWFCSARGN 113
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
TS SHIVNHLVRA+HKEV LH S LG+TILECYNCG +NVFLLGFI AK+++VVVLLCR
Sbjct: 114 TSSSHIVNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCR 173
Query: 235 EPCLNMMKESQSKDNVTIRW 254
+PC M S+ + T RW
Sbjct: 174 QPCA-AMPSSKDMNWDTSRW 192
>gi|259489087|tpe|CBF89067.1| TPA: hypothetical protein similar to possible regulator of nonsense
transcripts (Broad) [Aspergillus nidulans FGSC A4]
Length = 1077
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/614 (67%), Positives = 490/614 (79%), Gaps = 9/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A F+ PK E +++L GDE+RL+Y+G+ P W+ V
Sbjct: 269 LKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAVGDEMRLKYTGEL-RPKWEGV 327
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F+ D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 328 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDE 387
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 388 MSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRPLSLIQGPP 447
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 448 GTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 507
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR D++ EL KL QLK E GELSS DEK+ K L RA EREI +ADV
Sbjct: 508 PVGFLSLHEQVRLNDSN--IELIKLNQLKSELGELSSQDEKRLKQLTRAAEREILNNADV 565
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 566 ICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 625
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNG+T +R
Sbjct: 626 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLR 685
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ + PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV P IG+
Sbjct: 686 REVDFPWPILDSPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKDIGI 745
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKEIEVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 746 ITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 805
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE LVEGPL+NL++S++Q
Sbjct: 806 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHTLVEGPLSNLQESLIQ 865
Query: 835 FQKPKKIYNDRRLF 848
F +PK+ Y + F
Sbjct: 866 FSRPKQAYRGPQRF 879
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 100/142 (70%), Gaps = 5/142 (3%)
Query: 137 KADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHK 196
+ + HAC YCG+ NP+ VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH
Sbjct: 63 EKELAPHACAYCGIHNPSSVVKC--LACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHP 120
Query: 197 DSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
+S LG+T+LECYNCG +NVFLLGFI AK+++VVVLLCR+PC M S+ + T RW
Sbjct: 121 ESSLGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRWQP 179
Query: 257 GLNKKRVAYFVF--PKEDNELR 276
+ + ++ P + +LR
Sbjct: 180 LIEDRSFLTWLVAAPSDQEQLR 201
>gi|361128156|gb|EHL00106.1| putative Regulator of nonsense transcripts 1 like protein [Glarea
lozoyensis 74030]
Length = 898
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/608 (67%), Positives = 488/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + IRWD GLN K +A FV PK E +++L GDE+RL+Y G+ P W+ V
Sbjct: 100 LKEAQSEDGLIIRWDYGLNNKHLASFVLPKIELGDVKLAVGDEMRLKYKGEL-RPVWEGV 158
Query: 300 GHVIKL--TAQEEVALELRA---SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP + H FS D+VWK+TS+DRMQ AM+TFAVDE
Sbjct: 159 GYVIKIPNNQSDEVTIELRKVGNDKSVPTECTHNFSADYVWKATSYDRMQLAMRTFAVDE 218
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN+SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 219 MSVSGYIFHKLLGHEVAAAPMKIQMPKKFSVPGLPELNSSQINAVKSVLQKPLSLIQGPP 278
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 279 GTGKTVTSATIIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 338
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L+LH QVR D++ EL KL QLK E GELSS DEKK+K L RA EREI SADV
Sbjct: 339 TVGFLSLHEQVRMNDSN--LELTKLSQLKGELGELSSQDEKKFKTLTRAAEREILNSADV 396
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 397 ICCTCVGAGDPRLAKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 456
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LGL PIRL VQYRMHP LS+FPSN FYEG+LQNGVT+ +R
Sbjct: 457 KKAAKAGLNQSLFERLVILGLAPIRLNVQYRMHPCLSQFPSNMFYEGSLQNGVTMQQRLR 516
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEKIVT F ++GV P IGV
Sbjct: 517 RDVDFPWPVGDTPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQPQDIGV 576
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+++V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 577 ITPYEGQRSFVVSSMQNTGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 636
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LL H+KE CLVEGPL+NL+ S++Q
Sbjct: 637 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLSNLQTSLLQ 696
Query: 835 FQKPKKIY 842
F +PK Y
Sbjct: 697 FSRPKTTY 704
>gi|169615114|ref|XP_001800973.1| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
gi|160702890|gb|EAT82106.2| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
Length = 1078
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/608 (67%), Positives = 486/608 (79%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+DN+ +RWD+ LN K A F+ PK E +++L GDE+RLRY+G+ P W+ V
Sbjct: 286 LKESQSQDNLVVRWDMALNNKHTASFILPKLELGDVKLAVGDEMRLRYTGEL-RPHWEGV 344
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR + VP + H FS D+VWK+TSFDRMQ AMKTFA+DE
Sbjct: 345 GYVIKIPNNQSDEVTIELRTKGDHKSVPTECTHNFSADYVWKATSFDRMQHAMKTFAIDE 404
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +PR+F PGLPELN SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 405 MSVSGYIFHRLLGHEVASAPMKIQIPRKFSVPGLPELNGSQINAVKSVLQKPLSLIQGPP 464
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+ K QVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 465 GTGKTVTSATIIYHLCKISASQVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVES 524
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QVR DT+ EL+KL QLK + GELSS DEKK+K L RA EREI +ADV
Sbjct: 525 PVGFLSLHEQVRMNDTN--VELNKLNQLKSDVGELSSQDEKKFKQLTRAAEREILNAADV 582
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 583 ICCTCVGAGDPRLSKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 642
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA AGL QSLFERLV+LG PIRLQVQYRMHP LSEFPSN FYEG+LQNGVT+ ER
Sbjct: 643 KKAATAGLNQSLFERLVILGCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIR 702
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 703 RDVDFPWPVADSPMMFWSNLGAEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPGDIGI 762
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G+ +++ YK++EVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 763 ITPYEGQRSYVVSSMQATGSFKKENYKDVEVASVDAFQGREKDFIILSCVRSNDHQGIGF 822
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LL H+KE CLVEGPL NL+ S++Q
Sbjct: 823 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLTNLQVSLLQ 882
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 883 FSRPKQTY 890
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 108/170 (63%), Gaps = 17/170 (10%)
Query: 137 KADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHK 196
+ + HAC YCG+ N VV+C +C KWFC++RGN+S SHI+NHLVRA+HKEV LH
Sbjct: 80 EVELPAHACAYCGIHNAGSVVKC--LACTKWFCSARGNSSSSHIINHLVRARHKEVQLHP 137
Query: 197 DSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNV-TIRWD 255
S LG+T LECYNCG +NVFLLGFI AK+++VVVLLCR+PC +M SQ N T RW
Sbjct: 138 ASSLGDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCASM--PSQKDMNWDTSRWQ 195
Query: 256 IGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKL 305
+ + ++ P P D+ +LR A H + Q++ + +L
Sbjct: 196 PLIEDRSFLPWLVP--------APTDQEQLR----ARHLSPQTIAKLEEL 233
>gi|255937245|ref|XP_002559649.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584269|emb|CAP92302.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1079
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/702 (61%), Positives = 518/702 (73%), Gaps = 19/702 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A FV PK E +++L GDE+R++Y+G+ P W+ V
Sbjct: 269 LKESQSQDGLIVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRIKYNGEL-RPKWEGV 327
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 328 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFMADYVWKSTSFDRMQCAMKTFAVDE 387
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLP+LN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 388 QSVSGYIFHRLLGHEVAAAPMKTQIPKKFSVPGLPDLNGSQINAVKSVLQRPLSLIQGPP 447
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 448 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 507
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L+LH QVR D++ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 508 AVGFLSLHEQVRMNDSN--IELVKLNQLKAELGELSSQDEKRLKQLTRSAEREILTNADV 565
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 566 ICCTCVGAGDPRLSKGKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 625
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNG+TI +R
Sbjct: 626 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVR 685
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 686 RDVDFPWPIIDDPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPKDIGI 745
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NG +++ YKEIEVASVD+FQGREKDYIILSCVRSN+HQGIGF
Sbjct: 746 ITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQGIGF 805
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRAR+G+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 806 LSDPRRLNVALTRARFGLVILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQ 865
Query: 835 FQKPKKIYNDRRLF---FGAGPGIVPNDISTSN---PNADRRGSRARGYMPPGPPNGTHK 888
F +PK+ Y + F F + N ++ N N GY+ P + H
Sbjct: 866 FSRPKQAYRGPQRFQMSFSQTNNVPSNAVNGRNGGHRNEYHDSGSVVGYI-PDDVSSVHG 924
Query: 889 PGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHG-PVGA 929
L G P P+ FQ S P R A G P GA
Sbjct: 925 SALGGVGLPSGYPPM--FQNFGESWPAISGGRRANGGRPKGA 964
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 89/112 (79%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C SC KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 69 HACAYCGIHNPSSVVKC--LSCNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLGD 126
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC + M S+ + T RW
Sbjct: 127 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAS-MPSSKDMNWDTSRW 177
>gi|255088141|ref|XP_002505993.1| predicted protein [Micromonas sp. RCC299]
gi|226521264|gb|ACO67251.1| predicted protein [Micromonas sp. RCC299]
Length = 812
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/608 (67%), Positives = 490/608 (80%), Gaps = 13/608 (2%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPA------ 295
KESQSKD + +RWD+GLNK+R+AYF FP ++ RLV GD LRLR+ AA+PA
Sbjct: 208 KESQSKDGLRVRWDVGLNKRRLAYFSFPADEEIARLVVGDALRLRH---AAYPAGKDQSG 264
Query: 296 ---WQSVGHVIKLTAQEEVALELRASQG-VPVDINHGFSVDFVWKSTSFDRMQGAMKTFA 351
W + G V+K T +EEV LELR+ G PV+ +GFSVDF+W S SFDR Q AMK FA
Sbjct: 265 GATWSAEGVVLKFTDREEVVLELRSGSGDAPVEETNGFSVDFLWNSISFDRAQAAMKAFA 324
Query: 352 VDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQ 411
+DETSVSGYIYH LLGH+VE + + TLP++ AP LP LN SQ A ++VLQRP+SLIQ
Sbjct: 325 LDETSVSGYIYHLLLGHDVEPKPLAVTLPKKLSAPNLPPLNHSQESAARAVLQRPLSLIQ 384
Query: 412 GPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA 471
GPPGTGKTVTSA IVY +A+Q GQV+VCAPSNVAVDQLAEKI TGL+VVRL A+SRE
Sbjct: 385 GPPGTGKTVTSATIVYQLAQQHLGQVIVCAPSNVAVDQLAEKIERTGLRVVRLAARSREH 444
Query: 472 VSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQS 531
V+SPVEHLTLHYQV HLD+ E +E KLQQLKDE GELSS+DE+++K LKR EREI +
Sbjct: 445 VASPVEHLTLHYQVAHLDSPETAEFKKLQQLKDELGELSSNDERRHKRLKRKIEREIIAA 504
Query: 532 ADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
ADV+C T VGAGDPRLA+FRFRQVL+DESTQATEPECLIPL++GAKQVV+VGDHCQLGPV
Sbjct: 505 ADVVCVTAVGAGDPRLADFRFRQVLMDESTQATEPECLIPLIMGAKQVVMVGDHCQLGPV 564
Query: 592 IMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE 651
+ KKAARAGL QS+FERL+ LG++PIRLQVQYRMHP LSEFPSN+FYEG LQNGV +
Sbjct: 565 VTSKKAARAGLGQSMFERLISLGVQPIRLQVQYRMHPCLSEFPSNAFYEGALQNGVAAAD 624
Query: 652 RQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ 711
R + +DFPWP P PM F+ G EEISASGTSYLNR EAA VEK+VT LR+GV P +
Sbjct: 625 RLLTHVDFPWPNPTSPMMFWSMTGAEEISASGTSYLNRAEAAGVEKVVTHLLRAGVDPGR 684
Query: 712 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
IGV+TPYEGQRAY+ +M+R G L +LY E+EVASVD+FQGREKD+IILSCVRSNE G
Sbjct: 685 IGVVTPYEGQRAYVSQHMTRAGVLATRLYGEVEVASVDAFQGREKDFIILSCVRSNEKTG 744
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQS 831
IGFLNDPRRLNVA+TRAR G+VILGNPKVLS+Q L++ LL H+++ CLVEG L++L+QS
Sbjct: 745 IGFLNDPRRLNVAMTRARSGLVILGNPKVLSRQRLFHDLLNHFRDEGCLVEGALDSLRQS 804
Query: 832 MVQFQKPK 839
V +PK
Sbjct: 805 AVALSRPK 812
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT-SGSHIVNHLVRAKHKEVCLHKDSPLG 201
HAC YCG+ +PACVV+C + KWFCNSR +T S IV HLVR+++KEV LH DSPLG
Sbjct: 1 HACAYCGIRDPACVVKC--VATDKWFCNSRHSTLPASCIVYHLVRSRNKEVQLHADSPLG 58
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIG 257
+ +LECY G RNVF LGF+ + VVVLL R+P + + + +K + D+
Sbjct: 59 DMVLECYLTGQRNVFTLGFVPCVDDEVVVLLARDPSMGVAGGAAAKQLADMNLDLA 114
>gi|340369264|ref|XP_003383168.1| PREDICTED: regulator of nonsense transcripts 1-like [Amphimedon
queenslandica]
Length = 1081
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/814 (54%), Positives = 547/814 (67%), Gaps = 85/814 (10%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++D + +RWDIGLN+KR+AYF F +++ ++RL+ GDELRLRY G +H W +G
Sbjct: 298 LKESQTQDGIIVRWDIGLNQKRLAYFNFSRQNGDMRLMQGDELRLRYVG-RSHEPWNGIG 356
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HV K+ + EEV LELR++ VP F VDFVWKSTSFDRMQ A+K AVDE SVS
Sbjct: 357 HVTKVPSSFAEEVGLELRSNVNVPTSCTRDFCVDFVWKSTSFDRMQNALKLIAVDEGSVS 416
Query: 359 GYIYHHLLGHEVEVQ---MVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPG 415
Y+YH LLGHEV + ++ LP+ F AP LP+LN SQ++AVK+VLQ+P+ LIQGPPG
Sbjct: 417 TYLYHRLLGHEVLEEPAIIIHKQLPKHFSAPNLPKLNPSQIYAVKTVLQKPLGLIQGPPG 476
Query: 416 TGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSP 475
TGKTVTSA IVYH++K G GQVLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SP
Sbjct: 477 TGKTVTSATIVYHLSKMGMGQVLVCAPSNIAVDQLTEKIHKTGLKVVRLCAKSREAIDSP 536
Query: 476 VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVI 535
V L LH QV L EL KLQQLKD+QGELSS+DEK+Y +LKR E+E+ ADVI
Sbjct: 537 VSFLALHNQVIQLAKDSYPELKKLQQLKDDQGELSSTDEKRYTSLKRQLEKELLLGADVI 596
Query: 536 CCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
CCTCV AGDPRLA F F+ VLIDESTQATEPEC++P+V+G+KQVVLVGDHCQLGPVIMCK
Sbjct: 597 CCTCVSAGDPRLAKFSFKMVLIDESTQATEPECMVPIVMGSKQVVLVGDHCQLGPVIMCK 656
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
KAA A L+QSLFERLVLL +KPIRL+VQYRMHP+L+EFPS+ FY+GTLQN V+ ER+
Sbjct: 657 KAANARLSQSLFERLVLLNIKPIRLEVQYRMHPALTEFPSSVFYDGTLQNAVSPEERRMD 716
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
++FPWP ++PMFF+ GQEEIS+SGTSYLNRTEA NVEK+VT +++GV P QIGVI
Sbjct: 717 EVNFPWPNVDKPMFFWCSFGQEEISSSGTSYLNRTEAVNVEKVVTKLMKNGVKPVQIGVI 776
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPYEGQRAY+V M NG + +LY+++EVASVD+FQGREKD+IILSCVRSNEHQGIGFL
Sbjct: 777 TPYEGQRAYVVQQMQFNGGMSSKLYEQLEVASVDAFQGREKDFIILSCVRSNEHQGIGFL 836
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
ND RRLNVALTRA+YG++I+GN KVLS+ LW+ L+ Y+E LVEGPLNNL+++ +
Sbjct: 837 NDARRLNVALTRAKYGVIIIGNAKVLSRNELWHHLIKEYQEQGLLVEGPLNNLRRNEMHL 896
Query: 836 QKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHPAG 895
KP K+ R Y+P + K L G
Sbjct: 897 SKPVKM---------------------------------RKYIPRAVYSA--KEYLETTG 921
Query: 896 FPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGF-GAGRGSAGAPIGS 954
G S+PY + H H G+ GA R SA A
Sbjct: 922 ------------AGNQSRPYEV----GFHDDYYRSH-----DHMGYIGADRNSAIAAASI 960
Query: 955 HLQHQ---------QNTQQPIGTIGSTFNFPS-----LENSNSQPSVGGPLTQPGFVNNM 1000
HL H Q+ Q IGT G +F + + +S PLTQ +
Sbjct: 961 HLPHSIFIPPVPPPQHYNQMIGTAGKVDSFANNLLNSQASQDSSQQGSQPLTQQNLTMSQ 1020
Query: 1001 PVQGPSQTFRDGFSVGSMSQDFLGDDFKSQGSHV 1034
P Q +Q+ +SQD D+F SQ +
Sbjct: 1021 PTQPLTQS--------ELSQDIFVDEFNSQSDGI 1046
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 80/95 (84%), Gaps = 2/95 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC+YCG+ +PA VV CN S +KWFCN RGNTSGSHIVNHLVRA + EV LHK+ PLGE
Sbjct: 99 HACKYCGIHDPAAVVMCN--STKKWFCNGRGNTSGSHIVNHLVRAHYHEVTLHKEGPLGE 156
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
T+LECYNCGC+NVF LGF+ AK +SVV+LLCR PC
Sbjct: 157 TVLECYNCGCKNVFKLGFVPAKADSVVMLLCRLPC 191
>gi|296816783|ref|XP_002848728.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
gi|238839181|gb|EEQ28843.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
Length = 1088
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/608 (66%), Positives = 492/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D +++RWD+GLN K +A FV PK E +++L GDE+RL+Y+G+ W+ V
Sbjct: 279 LKEAQSQDGLSVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYAGEL-RSKWEGV 337
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR+ + VP +I+H F+ D+VWK+TSFDRMQ AMKTFAVDE
Sbjct: 338 GYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVWKATSFDRMQLAMKTFAVDE 397
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGY++H LLG+EV ++ +P++F PGLP LN+SQ+ AVK+VLQ+P+SLIQGPP
Sbjct: 398 MSVSGYLFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKPLSLIQGPP 457
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E I TGLK VR+ AKSRE V S
Sbjct: 458 GTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVES 517
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV HL+LH QVR+ D++ EL KL QLK E GELSS DEKKYK L RA E+EI +ADV
Sbjct: 518 PVRHLSLHEQVRNNDSN--IELVKLNQLKAELGELSSQDEKKYKQLTRAAEKEILTNADV 575
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQ VLVGDH QLGPVIM
Sbjct: 576 ICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMN 635
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LS+F SN FYEG+LQNGV+ +R
Sbjct: 636 KKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLL 695
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV ++PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV PS IG+
Sbjct: 696 KNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGI 755
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 756 ITPYEGQRSYVVSSMQLTGTFKKESYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 815
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL+ S++Q
Sbjct: 816 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQ 875
Query: 835 FQKPKKIY 842
F +PK+ Y
Sbjct: 876 FSRPKQAY 883
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 90/137 (65%), Gaps = 11/137 (8%)
Query: 118 MAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
MA ++ + G + + HAC + VV+C +C KWFC++RGNTS
Sbjct: 62 MASVAVDGAGKAQANKAEEEKELPAHAC--------SSVVKC--LTCNKWFCSARGNTSS 111
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
SHIVNHLVRA+HKEV LH S LG+TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC
Sbjct: 112 SHIVNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPC 171
Query: 238 LNMMKESQSKDNVTIRW 254
M S+ + T RW
Sbjct: 172 A-AMPSSKDMNWDTSRW 187
>gi|195396575|ref|XP_002056906.1| GJ16782 [Drosophila virilis]
gi|194146673|gb|EDW62392.1| GJ16782 [Drosophila virilis]
Length = 1219
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/614 (65%), Positives = 491/614 (79%), Gaps = 12/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRLRY G+ +P W +G
Sbjct: 307 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELYNP-WNEIG 365
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL+ S PV FSVDF+WK TSFDRM A++ FA+D SVS
Sbjct: 366 HVIKVPDNFGDDVGLELKCSTNAPVKCTSNFSVDFIWKCTSFDRMTRALRNFAMDRNSVS 425
Query: 359 GYIYHHLLGH-----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGP 413
YIY LLGH EV + R P+ + AP LP+LN SQV+AVK LQRP+SLIQGP
Sbjct: 426 NYIYSRLLGHGRADGSDEV-LFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGP 484
Query: 414 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS 473
PGTGKTVTSA IVY + KQ G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+
Sbjct: 485 PGTGKTVTSATIVYQLVKQHAGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAID 544
Query: 474 SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
SPV L LH Q+R+++T+ SEL KLQQLKDE GELSS+DEK+Y++LKR TE ++ ++AD
Sbjct: 545 SPVSFLALHNQIRNMETN--SELKKLQQLKDETGELSSADEKRYRSLKRGTENQLLEAAD 602
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM 593
VICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+M
Sbjct: 603 VICCTCVGAGDVRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVM 662
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
CKKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 663 CKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRR 722
Query: 654 SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
+DFPWP P RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++G+ P QIG
Sbjct: 723 LK-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIG 781
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
+ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIG
Sbjct: 782 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 841
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
FLNDPRRLNVALTRA+YGI+I+GNPKVL+KQ LWN LL YK+ + LVEG LNNLK+S++
Sbjct: 842 FLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLI 901
Query: 834 QFQKPKKIYNDRRL 847
FQKPKK+ N+ +
Sbjct: 902 HFQKPKKLVNNMNI 915
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/141 (58%), Positives = 99/141 (70%), Gaps = 15/141 (10%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC+YCG+ +PA VV CN +C+KWFCN RG+TSGSHI+NHLVRAKH+EV LH D PLGE
Sbjct: 108 HACKYCGIHDPATVVMCN--NCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHGDGPLGE 165
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKR 262
TILECY+CG RNVF+LGFI AK +SVVVLLCR+PC ++ KD + WD K
Sbjct: 166 TILECYSCGVRNVFVLGFIPAKADSVVVLLCRQPC---AAQNSLKD---MNWDQEQWKPL 219
Query: 263 VAYFVF-------PKEDNELR 276
+A F P E +LR
Sbjct: 220 IADRCFLPWLVKQPTEQGQLR 240
>gi|425767683|gb|EKV06249.1| Regulator of nonsense transcript, putative [Penicillium digitatum
PHI26]
gi|425780378|gb|EKV18385.1| Regulator of nonsense transcript, putative [Penicillium digitatum
Pd1]
Length = 1079
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/705 (61%), Positives = 519/705 (73%), Gaps = 25/705 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWD+GLN K +A FV PK E +++L GDE+R++Y+G+ P W+ V
Sbjct: 269 LKESQSQDGLIVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRIKYNGEL-RPKWEGV 327
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELRA + VP + H F D+VWKSTSFDRMQ AMKTFAVDE
Sbjct: 328 GYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFMADYVWKSTSFDRMQCAMKTFAVDE 387
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLP+LN SQ+ AVKSVLQRP+SLIQGPP
Sbjct: 388 QSVSGYIFHRLLGHEVAAAPMKTQIPKKFSVPGLPDLNGSQINAVKSVLQRPLSLIQGPP 447
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V S
Sbjct: 448 GTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVES 507
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L+LH QVR D++ EL KL QLK E GELSS DEK+ K L R+ EREI +ADV
Sbjct: 508 AVGFLSLHEQVRMNDSN--IELVKLNQLKAELGELSSQDEKRLKQLTRSAEREILTNADV 565
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 566 ICCTCVGAGDPRLSKGKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 625
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNG+TI +R
Sbjct: 626 KKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVR 685
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ + PM F+ +G EEISASGTSYLNRTEA NVEKIVT F ++GV P IG+
Sbjct: 686 RDVDFPWPIIDDPMMFWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPRDIGI 745
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKEIEVASVD+FQGREKDYIILSCVRSN+HQGIGF
Sbjct: 746 ITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQGIGF 805
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRAR+G+VILGNPKVLSK PLWN LL H+KE CLVEGPL+NL++S++Q
Sbjct: 806 LSDPRRLNVALTRARFGLVILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQ 865
Query: 835 FQKPKKIYNDRRLF------FGAGPGIVPNDISTSNPNADRRGSRARGYMPP--GPPNGT 886
F +PK+ Y + F P N + + N GY+P +G+
Sbjct: 866 FSRPKQAYRGPQRFQMSFSQTSNAPNNAVNGRNGGHRNEYHDSGSVVGYIPDDVSSVHGS 925
Query: 887 HKPGLH-PAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHG-PVGA 929
GL P+G+P P FQ S P R A G P GA
Sbjct: 926 ALGGLGLPSGYP------PMFQNFGESWPAISSGRRANGGRPKGA 964
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 89/112 (79%), Gaps = 3/112 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP+ VV+C SC KWFC++RGNTS SHIVNHLVRA+HKEV LH S LG+
Sbjct: 69 HACAYCGIHNPSSVVKC--LSCNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPGSSLGD 126
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRW 254
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC + M S+ + T RW
Sbjct: 127 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAS-MPSSKDMNWDTSRW 177
>gi|167516556|ref|XP_001742619.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779243|gb|EDQ92857.1| predicted protein [Monosiga brevicollis MX1]
Length = 856
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/608 (65%), Positives = 487/608 (80%), Gaps = 11/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKED-----NELRLVPGDELRLRYSGDAAHPA 295
MKESQ+ D + +RWD+GLNKK A+F P +L+++ GDELRL+Y+G+ + P
Sbjct: 215 MKESQTCDGIAVRWDMGLNKKHTAFFTLPSLRVSHFRQDLKVMVGDELRLKYAGELSRP- 273
Query: 296 WQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVD 353
WQ G V K+ EE ALELR ++ VP F V+F+WKS +FDRMQ AMKTFAVD
Sbjct: 274 WQGEGRVTKIADNHSEEYALELR-NKDVPTQCTQNFMVEFIWKSITFDRMQNAMKTFAVD 332
Query: 354 ETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGP 413
E SVS +IYH LLGH++E +++ T+P+RF GLPELN SQ+ A+++VLQRP+SLIQGP
Sbjct: 333 ERSVSAHIYHQLLGHQIEPALIKVTMPKRFSVKGLPELNHSQIEAIRAVLQRPLSLIQGP 392
Query: 414 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS 473
PGTGKTVTSA++VYH+ +Q G+VLVCAPSN+AVDQL EKI TG+KV+R+CAKSRE
Sbjct: 393 PGTGKTVTSASLVYHLVQQKHGKVLVCAPSNIAVDQLTEKIHRTGVKVLRVCAKSREEAD 452
Query: 474 SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
+ V L+LH QVR + E KL +LKD GELS +DEK+++ L+R E+E+ +SAD
Sbjct: 453 TRVSFLSLHNQVRTMKG--HPEYQKLLKLKDAVGELSEADEKRFRTLQRIIEQELLRSAD 510
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM 593
VICCTC AGD R++ FR VLIDE+TQ+TEPEC++PLVLG +Q V+VGDHCQLGPV+M
Sbjct: 511 VICCTCAAAGDRRVSGQTFRTVLIDEATQSTEPECMLPLVLGTRQCVMVGDHCQLGPVVM 570
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
CKKAA AGL+QSLFER VLLG++P+RLQVQYRMHP LSEFPSN+FYEG+LQNGVT +ER
Sbjct: 571 CKKAASAGLSQSLFERCVLLGIRPVRLQVQYRMHPCLSEFPSNTFYEGSLQNGVTASERL 630
Query: 654 SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
+DFPWPVP PM FY MGQEEISASGTSYLNRTEAANVEK+VT FL+SGV P QIG
Sbjct: 631 MPAVDFPWPVPETPMMFYASMGQEEISASGTSYLNRTEAANVEKMVTRFLKSGVTPEQIG 690
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
++TPYEGQRAYIV YMS NG LRQ LY+ +EVASVD+FQGREKDYIILSC RSNEHQGIG
Sbjct: 691 IVTPYEGQRAYIVQYMSFNGTLRQPLYEAVEVASVDAFQGREKDYIILSCTRSNEHQGIG 750
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
FLNDPRRLNVALTRA+YGI+I+GNPKVLSKQ LWN LL HYKE+ CLVEGPL+NLK M+
Sbjct: 751 FLNDPRRLNVALTRAKYGIIIVGNPKVLSKQALWNNLLVHYKENGCLVEGPLSNLKPCMM 810
Query: 834 QFQKPKKI 841
QF +P+ +
Sbjct: 811 QFSRPRPL 818
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 91/130 (70%), Gaps = 8/130 (6%)
Query: 128 DDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRA 187
DD + ++ HAC YCG+ +PA VV+C +WFCNSRGNTSGSHIVNHLVRA
Sbjct: 1 DDDDDEALVLSNLPAHACSYCGIHDPASVVKC--LDTNRWFCNSRGNTSGSHIVNHLVRA 58
Query: 188 KHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSK 247
+ V LHKD PLGET+LECYNCG RNVF LGFI AK +SVVVLLCR+PC + S +K
Sbjct: 59 RSHAVMLHKDGPLGETVLECYNCGSRNVFSLGFIPAKADSVVVLLCRQPCAS---SSAAK 115
Query: 248 DNVTIRWDIG 257
D+ WD+
Sbjct: 116 DS---NWDVA 122
>gi|154305574|ref|XP_001553189.1| hypothetical protein BC1G_08556 [Botryotinia fuckeliana B05.10]
gi|347828532|emb|CCD44229.1| similar to regulator of nonsense transcripts 1 [Botryotinia
fuckeliana]
Length = 1100
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/608 (67%), Positives = 487/608 (80%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + IRWD GLN K +A F+ PK E +++L GDE+RL+Y G+ P W+ V
Sbjct: 297 LKEAQSEDGLIIRWDYGLNNKHLASFILPKIELGDVKLAVGDEMRLKYKGEL-RPVWEGV 355
Query: 300 GHVIKL--TAQEEVALELRA---SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+V+K+ +EV +ELR + VP + H FS D+VWK+TS+DRMQ AMKTFAVDE
Sbjct: 356 GYVVKIPNNQSDEVTIELRKVGNDKSVPTECTHNFSADYVWKATSYDRMQFAMKTFAVDE 415
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN+SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 416 MSVSGYIFHKLLGHEVAAAPMKIQMPKKFSVPGLPELNSSQISAVKSVLQKPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA ++YH+AK GQVLVCAPSNVAVDQL E+I T LKVVRL AKSRE V S
Sbjct: 476 GTGKTVTSATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRTQLKVVRLTAKSREDVES 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L+LH QVR D++ EL KL QLK E GELSS DEKK+KAL RA EREI +ADV
Sbjct: 536 SVGFLSLHEQVRMNDSNH--ELAKLTQLKSELGELSSQDEKKFKALTRAAEREILSNADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 594 ICCTCVGAGDPRLAKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV LGL PIRL VQYRMHP LSEFPSN FY+G+LQNGVT+ +R
Sbjct: 654 KKAAKAGLNQSLFERLVHLGLNPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTMQQRLR 713
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEKIVT F ++GV P IGV
Sbjct: 714 RDVDFPWPVADTPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQPGDIGV 773
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V M G+ +++ YKE+EVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 774 ITPYEGQRSYVVTSMQNAGSFKKEHYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGF 833
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VI+GNPKVLSK PLW+ LL H+K+ CLVEGPL+NL+ S++Q
Sbjct: 834 LSDPRRLNVALTRAKYGLVIVGNPKVLSKHPLWHYLLQHFKDRSCLVEGPLSNLQTSLLQ 893
Query: 835 FQKPKKIY 842
F +PK Y
Sbjct: 894 FSRPKTTY 901
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 102/154 (66%), Gaps = 17/154 (11%)
Query: 104 NNSSNTSTSQI-VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVP 162
++ N S + + V+GM L D+ E HAC YCG+ +P+CVV+C
Sbjct: 65 DDDDNESLASVPVDGMKTLGLRGLEDEKE--------LPAHACAYCGIHSPSCVVKC--L 114
Query: 163 SCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFIS 222
C KWFC++RGN + SHIVNHLVRA+HKEV LH S LG+T+LECYNCG +NVFLLGFI
Sbjct: 115 GCNKWFCSARGNATSSHIVNHLVRARHKEVQLHPMSTLGDTVLECYNCGIKNVFLLGFIP 174
Query: 223 AKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
AK+++VVVLLCR+PC + SKD + WD+
Sbjct: 175 AKSDTVVVLLCRQPCASA---PSSKD---MSWDV 202
>gi|195131883|ref|XP_002010374.1| GI14718 [Drosophila mojavensis]
gi|193908824|gb|EDW07691.1| GI14718 [Drosophila mojavensis]
Length = 1187
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/614 (65%), Positives = 490/614 (79%), Gaps = 12/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRLRY G+ +P W +G
Sbjct: 304 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGEPYNP-WSEIG 362
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL+ S PV FSVDF+WK TSFDRM A++ FAVD SVS
Sbjct: 363 HVIKVPDNFGDDVGLELKCSSNAPVKCTSNFSVDFIWKCTSFDRMTRALRNFAVDRNSVS 422
Query: 359 GYIYHHLLGH-----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGP 413
YIY LLGH EV + R P+ + AP LP+LN SQV+AVK LQRP+SLIQGP
Sbjct: 423 NYIYSRLLGHGRADGSDEV-LFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGP 481
Query: 414 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS 473
PGTGKTVTSA IVY + KQ G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+
Sbjct: 482 PGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAID 541
Query: 474 SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
SPV L LH Q+R+++T+ SEL KLQQLKDE GELSS+DEK+Y++LKR E ++ ++AD
Sbjct: 542 SPVSFLALHNQIRNMETN--SELKKLQQLKDETGELSSADEKRYRSLKRGAENQLLEAAD 599
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM 593
VICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+M
Sbjct: 600 VICCTCVGAGDMRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVM 659
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
CKKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 660 CKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRR 719
Query: 654 SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
+DFPWP P RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++G+ P QIG
Sbjct: 720 LK-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIG 778
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
+ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIG
Sbjct: 779 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 838
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
FLNDPRRLNVALTRA+YGI+I+GNPKVL+KQ LWN LL YK+ + LVEG LNNLK+S++
Sbjct: 839 FLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLI 898
Query: 834 QFQKPKKIYNDRRL 847
FQKPKK+ N+ +
Sbjct: 899 HFQKPKKLVNNMNI 912
Score = 179 bits (454), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 115/182 (63%), Gaps = 17/182 (9%)
Query: 104 NNSSNTSTSQIVEGMAGLSFEETGDD--VEGFEYGKADFTEHACRYCGVSNPACVVRCNV 161
NN N + I +A L FEE D+ V G + HAC+YCG+ +PA VV CN
Sbjct: 64 NNDINPRLASITNDLADLQFEEEDDENGVGGNSAYVKELPPHACKYCGIHDPATVVMCN- 122
Query: 162 PSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFI 221
+C+KWFCN RG+TSGSHI+NHLVRAKH+EV LH D PLGETILECY+CG RNVF+LGFI
Sbjct: 123 -NCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHGDGPLGETILECYSCGVRNVFVLGFI 181
Query: 222 SAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVF-------PKEDNE 274
AK +SVVVLLCR+PC ++ KD + WD K +A F P E +
Sbjct: 182 PAKADSVVVLLCRQPC---AAQNSLKD---MNWDQEQWKPLIADRCFLHWLVKQPSEQGQ 235
Query: 275 LR 276
LR
Sbjct: 236 LR 237
>gi|195043318|ref|XP_001991595.1| GH11976 [Drosophila grimshawi]
gi|193901353|gb|EDW00220.1| GH11976 [Drosophila grimshawi]
Length = 1276
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/610 (65%), Positives = 490/610 (80%), Gaps = 12/610 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRLRY G+ +P W +G
Sbjct: 323 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELYNP-WSEIG 381
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL+ P+ FSVDF+WK TSFDRM A++ FA+D SVS
Sbjct: 382 HVIKVPDNFGDDVGLELKCFSNAPLKFTSNFSVDFIWKCTSFDRMTRALRNFAMDRNSVS 441
Query: 359 GYIYHHLLGH-----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGP 413
YIY LLGH EV + R P+ + AP LP+LN SQV+AVK LQRP+SLIQGP
Sbjct: 442 NYIYSRLLGHGRADGSDEV-LFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGP 500
Query: 414 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS 473
PGTGKTVTSA IVY + KQ G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+
Sbjct: 501 PGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAID 560
Query: 474 SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
SPV L LH Q+R+++T+ SEL KLQQLKDE GELSS+DEK+Y++LKRATE ++ ++AD
Sbjct: 561 SPVSFLALHNQIRNMETN--SELKKLQQLKDETGELSSADEKRYRSLKRATENQLLEAAD 618
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM 593
VICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+M
Sbjct: 619 VICCTCVGAGDVRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVM 678
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
CKKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 679 CKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRR 738
Query: 654 SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
+DFPWP P+RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++G+ P QIG
Sbjct: 739 LK-LDFPWPQPDRPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIG 797
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
+ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIG
Sbjct: 798 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 857
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
FLNDPRRLNVALTRA+YGI+I+GNPKVLSKQ LWN LL YK+ + LVEG LNNLK+S++
Sbjct: 858 FLNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDRKVLVEGSLNNLKESLI 917
Query: 834 QFQKPKKIYN 843
FQKPKK+ N
Sbjct: 918 HFQKPKKLVN 927
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 111/188 (59%), Gaps = 33/188 (17%)
Query: 114 IVEGMAGLSFEETGDD------------------VEGFEYGKADFTEHACRYCGVSNPAC 155
I +A L FEE D+ V G + HAC+YCG+ +PA
Sbjct: 77 ITNVLAELQFEEEDDESIGGGGGGVGGGNGIGRCVGGTSAYVKELPAHACKYCGIHDPAT 136
Query: 156 VVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNV 215
VV CN +C+KWFCN RG+TSGSHI+NHLVRAKH+EV LH D PLGETILECY+CG RNV
Sbjct: 137 VVMCN--NCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHGDGPLGETILECYSCGVRNV 194
Query: 216 FLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVF------- 268
F+LGFI AK +SVVVLLCR+PC ++ KD + WD K +A F
Sbjct: 195 FVLGFIPAKADSVVVLLCRQPC---AAQNSLKD---MNWDQEQWKPLIADRCFLAWLVKQ 248
Query: 269 PKEDNELR 276
P E +LR
Sbjct: 249 PSEQGQLR 256
>gi|198468730|ref|XP_002134102.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
gi|198146545|gb|EDY72729.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
Length = 1209
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/609 (65%), Positives = 488/609 (80%), Gaps = 10/609 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRLRY G+ P W +G
Sbjct: 297 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGEMYSP-WNEIG 355
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +++ LEL++S PV + FSVDF+WK TSFDRM A++TFA+D SVS
Sbjct: 356 HVIKVPDNFGDDIGLELKSSTNAPVKCSSNFSVDFIWKCTSFDRMTRALRTFAMDRQSVS 415
Query: 359 GYIYHHLLGH----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
+IY LLGH + + R P+ F AP LP+LN SQV+AVK LQRP+SLIQGPP
Sbjct: 416 NFIYSRLLGHGRPDANDDVLFRGAQPKLFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVY + KQ G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+ S
Sbjct: 476 GTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDS 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L LH Q+R ++T+ +EL KLQQLKDE GELSS+DEK+Y+ LKR TE ++ ++ADV
Sbjct: 536 PVSFLALHNQIRSMETN--TELKKLQQLKDETGELSSADEKRYRNLKRGTENQLLEAADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+MC
Sbjct: 594 ICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL 713
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP P RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++GV P QIG+
Sbjct: 714 K-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQIGI 772
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIGF
Sbjct: 773 ITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGF 832
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA+YGI+I+GNPKVL+KQ LWN LL YK+ + LVEG LNNLK+S++
Sbjct: 833 LNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIH 892
Query: 835 FQKPKKIYN 843
FQKPKK+ N
Sbjct: 893 FQKPKKLVN 901
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 117/185 (63%), Gaps = 17/185 (9%)
Query: 99 SKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVR 158
++R + N + I + L FEE DD G + K + HAC+YCG+ +P+ VV
Sbjct: 56 TRRRSVGEMNPRLASITNDLGDLQFEEE-DDEHGGSFVK-ELPPHACKYCGIHDPSTVVM 113
Query: 159 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 218
CN +C+KWFCN RG+TSGSHI+NHLVRAKH+EV LH D PLGET+LECY+CG RNVF+L
Sbjct: 114 CN--NCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHADGPLGETVLECYSCGVRNVFVL 171
Query: 219 GFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVF-------PKE 271
GFI AK +SVVVLLCR+PC ++ KD + WD K +A F P E
Sbjct: 172 GFIPAKADSVVVLLCRQPC---AAQNSLKD---MNWDQDQWKPLIADRCFLPWLVKQPSE 225
Query: 272 DNELR 276
+LR
Sbjct: 226 QGQLR 230
>gi|194770581|ref|XP_001967370.1| GF21587 [Drosophila ananassae]
gi|190618050|gb|EDV33574.1| GF21587 [Drosophila ananassae]
Length = 1180
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/611 (65%), Positives = 490/611 (80%), Gaps = 12/611 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRLRY G+ +P W +G
Sbjct: 297 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELYNP-WSEIG 355
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL+ S PV FSVDF+WK TSFDRM A++ FA+D SVS
Sbjct: 356 HVIKVPDNFGDDVGLELKTSSNAPVKCTSNFSVDFIWKCTSFDRMTRALRNFAMDRNSVS 415
Query: 359 GYIYHHLLGH-----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGP 413
YIY LLGH EV + R P+ + AP LP+LN SQV+AVK LQRP+SLIQGP
Sbjct: 416 NYIYSRLLGHGRPDANDEV-LFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGP 474
Query: 414 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS 473
PGTGKTVTSA IVY + KQ G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+
Sbjct: 475 PGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAID 534
Query: 474 SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
SPV L LH Q+R+++T+ SEL KLQQLKDE GELSS+DEK+Y++LKR TE ++ ++AD
Sbjct: 535 SPVSFLALHNQIRNMETN--SELKKLQQLKDETGELSSADEKRYRSLKRGTENQLLEAAD 592
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM 593
VICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+M
Sbjct: 593 VICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVM 652
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
CKKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 653 CKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRR 712
Query: 654 SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
+DFPWP P RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++G+ P QIG
Sbjct: 713 LK-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIG 771
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
+ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIG
Sbjct: 772 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 831
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
FLNDPRRLNVALTRA+YGI+I+GNPKVL+KQ LWN LL YK+ + LVEG LNNLK+S++
Sbjct: 832 FLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLI 891
Query: 834 QFQKPKKIYND 844
FQKPKK+ N+
Sbjct: 892 HFQKPKKLVNN 902
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 100/137 (72%), Gaps = 4/137 (2%)
Query: 101 RGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCN 160
R + S+ + I + L FEE DD G Y K + HAC+YCG+ +PA VV CN
Sbjct: 58 RRSGGDSHPRLASITNDLGDLQFEEE-DDEAGSSYVK-ELPAHACKYCGIHDPATVVMCN 115
Query: 161 VPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGF 220
+C+KWFCN RG+TSGSHI+NHLVRAKH+EV LH D PLGETILECY+CG RNVF+LGF
Sbjct: 116 --NCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHGDGPLGETILECYSCGVRNVFVLGF 173
Query: 221 ISAKTESVVVLLCREPC 237
I AK +SVVVLLCR+PC
Sbjct: 174 IPAKADSVVVLLCRQPC 190
>gi|195446723|ref|XP_002070897.1| GK25498 [Drosophila willistoni]
gi|194166982|gb|EDW81883.1| GK25498 [Drosophila willistoni]
Length = 1208
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/644 (62%), Positives = 497/644 (77%), Gaps = 18/644 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRLRY G+ HP W G
Sbjct: 302 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELYHP-WSETG 360
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LE++ S PV FSVDF+WK TSFDRM A++ FA+D SVS
Sbjct: 361 HVIKVPDNFGDDVGLEMKTSSNAPVKCTSHFSVDFIWKCTSFDRMARALRIFAMDRNSVS 420
Query: 359 GYIYHHLLGHE----VEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
YIY LLGH + + R P+ + AP LPELN SQV+AVK LQRP+SLIQGPP
Sbjct: 421 NYIYSRLLGHGRPDGTDEVLFRGPQPKLYSAPHLPELNRSQVYAVKHALQRPLSLIQGPP 480
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVY + KQ G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+ S
Sbjct: 481 GTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDS 540
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L LH Q+ ++ + +EL KLQQLKDE GELSS+DEK+Y++LKR+TE ++ ++ADV
Sbjct: 541 PVSFLALHNQISNIKAN--TELKKLQQLKDETGELSSADEKRYRSLKRSTENQLLEAADV 598
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+MC
Sbjct: 599 ICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 658
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 659 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL 718
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP P RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++GV P QIG+
Sbjct: 719 K-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQIGI 777
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIGF
Sbjct: 778 ITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGF 837
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA+YGI+I+GNPKVLSKQ LWN LL YK+ + LVEG LNNLK+SM+
Sbjct: 838 LNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDRKVLVEGSLNNLKESMIH 897
Query: 835 FQKPKKIYND--------RRLFFGAGPGIVPNDISTSNPNADRR 870
FQKPKK+ N+ + A +VP I + N +R+
Sbjct: 898 FQKPKKLVNNLNMGAHFMSTMMADAKEVMVPGSIYERSSNFNRQ 941
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 118/183 (64%), Gaps = 16/183 (8%)
Query: 101 RGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCN 160
RG S+ + I + +A L FEE D+V Y K + HAC+YCG+ +PA VV CN
Sbjct: 62 RGPVGGSHPRLASITQDLADLQFEEEDDEVGSSSYVK-ELPAHACKYCGIHDPATVVMCN 120
Query: 161 VPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGF 220
+C+KWFCN RG+TSGSHIVNHLVRAKH+EV LH D PLGETILECY+CG RNVF+LGF
Sbjct: 121 --NCKKWFCNGRGSTSGSHIVNHLVRAKHREVTLHGDGPLGETILECYSCGVRNVFVLGF 178
Query: 221 ISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVF-------PKEDN 273
I AK +SVVVLLCR+PC ++ KD + WD K +A F P E
Sbjct: 179 IPAKADSVVVLLCRQPC---AAQNSLKD---MNWDQEQWKPLIADRCFLPWLVKQPSEQG 232
Query: 274 ELR 276
+LR
Sbjct: 233 QLR 235
>gi|195480688|ref|XP_002101353.1| GE17585 [Drosophila yakuba]
gi|194188877|gb|EDX02461.1| GE17585 [Drosophila yakuba]
Length = 1187
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/649 (62%), Positives = 500/649 (77%), Gaps = 12/649 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRLRY G+ +P W +G
Sbjct: 297 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELYNP-WSEIG 355
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL+ S PV F+VDF+WK TSFDRM A++ FA+D SVS
Sbjct: 356 HVIKVPDNFGDDVGLELKTSSNAPVKCTSNFTVDFIWKCTSFDRMTRALRKFAMDRNSVS 415
Query: 359 GYIYHHLLGH----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
YIY LLGH + + R P+ + AP LP+LN SQV+AVK LQRP+SLIQGPP
Sbjct: 416 NYIYSRLLGHGRPDSNDEVLFRGAQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVY + K G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+ S
Sbjct: 476 GTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDS 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L LH Q+R+++T+ SEL KLQQLKDE GELSS+DEK+Y++LKRA E ++ ++ADV
Sbjct: 536 PVSFLALHNQIRNMETN--SELKKLQQLKDETGELSSADEKRYRSLKRAAENQLLEAADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+MC
Sbjct: 594 ICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL 713
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP P RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++G+ P QIG+
Sbjct: 714 K-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGI 772
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIGF
Sbjct: 773 ITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGF 832
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA+YGI+I+GNPKVL+KQ LWN LL YK+ + LVEG LNNLK+S++
Sbjct: 833 LNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIH 892
Query: 835 FQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNA--DRRGSRARGYMPPG 881
FQKPKK+ N + ++ + P + DR G +G PG
Sbjct: 893 FQKPKKLVNSMNIGAHFMSTMIADAKEVMVPGSIYDRSGGYGQGRQMPG 941
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 117/183 (63%), Gaps = 17/183 (9%)
Query: 101 RGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCN 160
R + SN + I +A L FEE DD G Y K + HAC+YCG+ +PA VV CN
Sbjct: 58 RRSGGDSNPRLASITNDLADLQFEEE-DDEGGSSYVK-ELPAHACKYCGIHDPATVVMCN 115
Query: 161 VPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGF 220
+CRKWFCN RG+TSGSHI+NHLVRAKH+EV LH + PLGETILECY+CG RNVF+LGF
Sbjct: 116 --NCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVLGF 173
Query: 221 ISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVF-------PKEDN 273
I AK +SVVVLLCR+PC ++ KD + WD K +A F P E
Sbjct: 174 IPAKADSVVVLLCRQPC---AAQNSLKD---MNWDQEQWKPLIADRCFLPWLVKQPSEQG 227
Query: 274 ELR 276
+LR
Sbjct: 228 QLR 230
>gi|345567573|gb|EGX50503.1| hypothetical protein AOL_s00075g232 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/667 (65%), Positives = 508/667 (76%), Gaps = 28/667 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQS+D + +RWDIGLN K +A F+ PK E +++L GDE+RLRY GD W+ V
Sbjct: 295 LKESQSQDGLIVRWDIGLNNKHLASFMLPKLELGDVKLAVGDEMRLRYVGDLRQ-HWEGV 353
Query: 300 GHVIKL--TAQEEVALELRA---SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G VIK+ +EV +ELR + VP + H FS D+VWK+TSFDRMQ AMK FAVDE
Sbjct: 354 GFVIKIPNNMSDEVTIELRKGANDKSVPTECTHSFSADYVWKATSFDRMQLAMKNFAVDE 413
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYIYH LLGH+V ++ LPRRF PGLPELN SQV AVKSVLQ+P+SLIQGPP
Sbjct: 414 MSVSGYIYHRLLGHDVAAAPLKTPLPRRFSVPGLPELNISQVCAVKSVLQKPLSLIQGPP 473
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVYH+AK QVLVCAPSNVAVDQL EKI T LKVVRL AKSRE V S
Sbjct: 474 GTGKTVTSATIVYHLAKLSGSQVLVCAPSNVAVDQLTEKIHRTSLKVVRLTAKSREDVES 533
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L+LH QVR +T+ EL KL+QLKDE GELS DEKK+K L RA E+EI +ADV
Sbjct: 534 QVSFLSLHEQVRINNTN--VELVKLRQLKDELGELSLQDEKKFKHLTRAAEKEILTNADV 591
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQ+VLVGDH QLGPVIM
Sbjct: 592 ICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQLVLVGDHQQLGPVIMN 651
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAARAGL QSLFERLV+LG PIRL VQYRMHP LSEFPSN FYEG+LQNGVT+ ER
Sbjct: 652 KKAARAGLHQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERLR 711
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAA EKI++ F ++GV PSQIG+
Sbjct: 712 RNVDFPWPVVDSPMMFWSNLGNEEISASGTSYLNRTEAAACEKIISKFFKAGVSPSQIGI 771
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M NG+ +++LYK+IEVASVD+FQGREKDYI+LSCVRSN+HQGIGF
Sbjct: 772 ITPYEGQRSYIVSSMQTNGSHKKELYKDIEVASVDAFQGREKDYIVLSCVRSNDHQGIGF 831
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LL HYKEH CLVEGPL+NL+ S +Q
Sbjct: 832 LNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHHLLLHYKEHNCLVEGPLSNLQISFIQ 891
Query: 835 FQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPG--LH 892
F +P++ Y + F A G S S+ + D P +G +PG +H
Sbjct: 892 FSRPRQSYRGPQRFQMAYSG----QTSMSSGSLD-------------PSSGVSRPGMNMH 934
Query: 893 PAGFPMP 899
+G P
Sbjct: 935 SSGATQP 941
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 88/113 (77%), Gaps = 3/113 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +P+ VV+C SC KWFC+ RGNTS SHIVNHLVRA+HKEVCLH S LGE
Sbjct: 95 HACAYCGIHSPSAVVKC--LSCNKWFCSGRGNTSSSHIVNHLVRARHKEVCLHPSSSLGE 152
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
T LECYNCG RNVFLLGFI AK+++VVVLLCR+PC M S+ + T RW+
Sbjct: 153 TTLECYNCGTRNVFLLGFIPAKSDTVVVLLCRQPCA-AMPSSKDMNWDTSRWE 204
>gi|320592037|gb|EFX04476.1| regulator of nonsense [Grosmannia clavigera kw1407]
Length = 1095
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/608 (66%), Positives = 484/608 (79%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+DN+ IRWD GLN K +A F+ PK E +++L GDE+RL+Y G+ P W+ V
Sbjct: 299 LKEAQSEDNLVIRWDYGLNNKHLAIFILPKIESGDVKLAVGDEMRLKYKGEL-RPPWEGV 357
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + + VP + H FS D+VWK+TS+DRMQ AMKTFAVDE
Sbjct: 358 GYVIKIPNNQSDEVKLELRKTGNDKSVPTECTHNFSADYVWKATSYDRMQIAMKTFAVDE 417
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV V ++ +LP++F AP LPELN SQ+ A+K+VL P+SLIQGPP
Sbjct: 418 MSVSGYIFHKLLGHEVAVAPMKTSLPKKFTAPQLPELNGSQISAIKAVLSTPLSLIQGPP 477
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E++ TGLKVVRL AKSRE V S
Sbjct: 478 GTGKTVTSATIIYHLAKMNNSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVES 537
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR DT+ EL +LQ LK+E GELSS DEKK+K L +A E+EI +ADV
Sbjct: 538 SVSFLALHEQVRMNDTN--VELTRLQLLKNEVGELSSLDEKKFKQLTKAAEKEILNNADV 595
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 596 VCCTCVGAGDPRLAKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 655
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV LG PIRL VQYRMHP L+ FPSN FYEG+LQNGVTI ER
Sbjct: 656 KKAAKAGLNQSLFERLVKLGFAPIRLNVQYRMHPHLAAFPSNMFYEGSLQNGVTIQERLR 715
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEK+VT F ++GV P+ IGV
Sbjct: 716 KDVDFPWPVVDTPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPADIGV 775
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV M G +++ YKE+EVASVD+FQGREKDYI+LSCVRSNE+QGIGF
Sbjct: 776 ITPYEGQRSYIVTTMQNTGTFKKESYKEVEVASVDAFQGREKDYIVLSCVRSNENQGIGF 835
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YGIVILGNPKVL+K LW LL H+K+H+CLVEGPL+NL+ S+ Q
Sbjct: 836 LSDPRRLNVALTRAKYGIVILGNPKVLAKHELWYHLLVHFKDHKCLVEGPLSNLQPSLHQ 895
Query: 835 FQKPKKIY 842
F +PK Y
Sbjct: 896 FSRPKHSY 903
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 98/142 (69%), Gaps = 16/142 (11%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
V+G+ GL G E + + HAC YCG+ +PA VV+C +C KWFC++RGN
Sbjct: 79 VDGVQGLKL--------GAEEEEKELPAHACAYCGIHSPASVVKC--LACNKWFCSARGN 128
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
+ SHIVNHLVRA+HKEV LH S LG+T+LECYNCG +NVFLLGFI AK+++VVVLLCR
Sbjct: 129 ATSSHIVNHLVRARHKEVQLHPQSSLGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCR 188
Query: 235 EPCLNMMKESQSKDNVTIRWDI 256
+PC + SKD + WDI
Sbjct: 189 QPC---AASTSSKD---MSWDI 204
>gi|402085799|gb|EJT80697.1| regulator-nonsense transcripts 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1097
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/613 (65%), Positives = 486/613 (79%), Gaps = 9/613 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD GLN K +A F+ PK E +++L GDE+RL+Y G+ P W+ V
Sbjct: 298 LKEAQSEDGLVVRWDYGLNNKHLASFILPKIESGDVKLAVGDEMRLKYKGEL-RPQWEGV 356
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+V+K+ +EV LELR S + VP + H FS D+VWK+TS+DRMQ AM+ FAVDE
Sbjct: 357 GYVVKIPNNQSDEVTLELRKSGNDKSVPTECTHNFSADYVWKATSYDRMQLAMRNFAVDE 416
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV V +R T+P++F APGLPELN SQ+ A+K+VL P+SLIQGPP
Sbjct: 417 MSVSGYIFHKLLGHEVAVAPMRTTMPKKFTAPGLPELNGSQISAIKAVLSTPLSLIQGPP 476
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E++ TGLKVVRL AKSRE V S
Sbjct: 477 GTGKTVTSATIIYHLAKMNNSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVES 536
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR DT+ EL KLQQLK E GELSS DEKK+K L +A EREI +ADV
Sbjct: 537 SVSFLALHEQVRMNDTN--PELAKLQQLKSELGELSSQDEKKFKQLTKAAEREILGNADV 594
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 595 VCCTCVGAGDPRLAKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 654
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L PIRL VQYRMHP LSEFPSN FYEG+LQNGVTI +R
Sbjct: 655 KKAAKAGLNQSLFERLVKLNLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLR 714
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEKIVT F ++GV P IGV
Sbjct: 715 RDVDFPWPVGDMPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVKPGDIGV 774
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKE+EVASVD+FQGREKD+I+LSCVRSNE+QGIGF
Sbjct: 775 ITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGF 834
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VI+GNPKVLSK LW+ LL H+++ +CLV+GPL NL+ S++Q
Sbjct: 835 LSDPRRLNVALTRAKYGVVIIGNPKVLSKHELWHHLLVHFRDRKCLVDGPLTNLQTSLLQ 894
Query: 835 FQKPKKIYNDRRL 847
F +P++ + R
Sbjct: 895 FGRPRQSFRPARF 907
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 101/142 (71%), Gaps = 16/142 (11%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
VEGM GL+ + ++ E HAC YCG+ +PACVV+C C+KWFCNSRGN
Sbjct: 78 VEGMRGLNLKTADEEKE--------LPAHACAYCGIHSPACVVKC--LGCKKWFCNSRGN 127
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
TS SHI+NHLVRA+HKEV LH +S LG+TILECYNCG RNVFLLGFI AK+++VVVLLCR
Sbjct: 128 TSSSHIINHLVRARHKEVQLHPESTLGDTILECYNCGVRNVFLLGFIPAKSDTVVVLLCR 187
Query: 235 EPCLNMMKESQSKDNVTIRWDI 256
+PC SKD + WDI
Sbjct: 188 QPC---AANPSSKD---MSWDI 203
>gi|389640681|ref|XP_003717973.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|351640526|gb|EHA48389.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|440471031|gb|ELQ40068.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae Y34]
gi|440490268|gb|ELQ69843.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae P131]
Length = 1105
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/613 (65%), Positives = 485/613 (79%), Gaps = 9/613 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD GLN K +A F+ PK E +++L GDE+RL+Y G+ P W+ V
Sbjct: 297 LKEAQSEDGLVVRWDYGLNNKHLASFILPKIESGDVKLAVGDEMRLKYKGEL-RPQWEGV 355
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+V+K+ +EV LELR S + VP + H FS D+VWK+TS+DRMQ AM+ FAVDE
Sbjct: 356 GYVVKIPNNQSDEVTLELRKSGNDKSVPTECTHNFSADYVWKATSYDRMQLAMRNFAVDE 415
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV V +R T+P++F APGLP+LN SQ+ A+K+VL P+SLIQGPP
Sbjct: 416 MSVSGYIFHKLLGHEVAVAPMRTTMPKKFTAPGLPDLNGSQISAIKAVLSTPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E++ TGLKVVRL AKSRE V S
Sbjct: 476 GTGKTVTSATIIYHLAKMNGSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVES 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR DT+ EL KLQQLK E GELSS DEKK+K L +A EREI +ADV
Sbjct: 536 SVSFLALHEQVRMNDTN--PELAKLQQLKSELGELSSQDEKKFKQLTKAAEREILSNADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 594 VCCTCVGAGDPRLAKLKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV LGL PIRL VQYRMHP LSEFPSN FYEG+LQNGVTI +R
Sbjct: 654 KKAAKAGLNQSLFERLVKLGLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLR 713
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEK+VT F ++GV P IGV
Sbjct: 714 RDVDFPWPVADMPMMFWSNLGNEEISASGTSYLNRTEASNVEKLVTRFFKAGVKPGDIGV 773
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
+TPYEGQR+YIV+ M G +++ YKE+EVASVD+FQGREKD+I+LSCVRSNE QGIGF
Sbjct: 774 VTPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGF 833
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VI+GNPKVLSK LW+ LL H+++ +CLV+GPL NL+ S++Q
Sbjct: 834 LSDPRRLNVALTRAKYGVVIIGNPKVLSKHELWHHLLIHFRDRKCLVDGPLTNLQASLLQ 893
Query: 835 FQKPKKIYNDRRL 847
F KPK + R
Sbjct: 894 FSKPKTPFRPARF 906
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 102/142 (71%), Gaps = 16/142 (11%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
V+GM GLS + ++ E EHAC YCG+ +PACVV+C C+KWFCNSRGN
Sbjct: 77 VDGMRGLSLKAAEEEKE--------LPEHACAYCGIHSPACVVKC--LGCKKWFCNSRGN 126
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
TS SHI+NHLVRA+HKEV LH +S LG+TILECYNCG RNVFLLGFI AK+++VVVLLCR
Sbjct: 127 TSSSHIINHLVRARHKEVQLHPESTLGDTILECYNCGVRNVFLLGFIPAKSDTVVVLLCR 186
Query: 235 EPCLNMMKESQSKDNVTIRWDI 256
+PC SKD + WDI
Sbjct: 187 QPC---AANPSSKD---MSWDI 202
>gi|312373027|gb|EFR20858.1| hypothetical protein AND_18385 [Anopheles darlingi]
Length = 1161
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/609 (64%), Positives = 489/609 (80%), Gaps = 10/609 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ IRWD GLNKK +AYF K D +++L+ GDEL+LRY G+ H W +G
Sbjct: 303 LKESQTQENIEIRWDTGLNKKTIAYFTLAKNDGDMKLMHGDELKLRYVGEL-HKPWSCLG 361
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL+ + PV+ F+VDF+WK TSF+RMQ A++ FA+D SVS
Sbjct: 362 HVIKVPDNYGDDVGLELKHNHQAPVECTVNFAVDFIWKGTSFERMQQALRKFAMDAKSVS 421
Query: 359 GYIYHHLLGHEV----EVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
YIY LLG+ E + R TLP+ F AP LP+LN SQV+AV+ LQRP+SLIQGPP
Sbjct: 422 NYIYSRLLGNVRADGNEEVLFRFTLPKHFSAPNLPDLNRSQVYAVRHALQRPLSLIQGPP 481
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVY +AK G +LVCAPSN AVDQL EKI T LKVVR+CA+SREA+ S
Sbjct: 482 GTGKTVTSATIVYQLAKLNSGPILVCAPSNTAVDQLTEKIHRTNLKVVRVCARSREAIDS 541
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV +L LH Q+R++ ++ +EL KLQQLKDE GELS SDE++Y++LK+ ERE+ ++ADV
Sbjct: 542 PVSYLALHNQIRNM--AQNTELKKLQQLKDETGELSLSDERRYRSLKKQAERELLEAADV 599
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGD RL +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+MC
Sbjct: 600 ICCTCVGAGDLRLQRLKFNSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 659
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL+QSLFERLV LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+
Sbjct: 660 KKAAKAGLSQSLFERLVALGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKL 719
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP P+ PMFF V GQEEI+ SGTSYLNRTEA+NVEKI T FL++G+ P QIG+
Sbjct: 720 K-VDFPWPSPDCPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPEQIGI 778
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVR+NEHQGIGF
Sbjct: 779 ITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGF 838
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA+YGI+I+GNPKVLSKQ LWN LL YK+ + LVEG LNNLK+SM+Q
Sbjct: 839 LNDPRRLNVALTRAKYGIIIVGNPKVLSKQELWNHLLNFYKDKKVLVEGSLNNLKESMIQ 898
Query: 835 FQKPKKIYN 843
F KPKK+ N
Sbjct: 899 FTKPKKLVN 907
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 103/146 (70%), Gaps = 15/146 (10%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HACRYCG+ P+ VV CN+ C+KWFCN RGNTSGSHIVNHLVRAKH+EV LH D PLGE
Sbjct: 104 HACRYCGIHEPSTVVMCNI--CKKWFCNGRGNTSGSHIVNHLVRAKHREVTLHSDGPLGE 161
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKR 262
T+LECY+C RNVFLLGFI A+++SVVVLLCR+PC ++ KD + WD K
Sbjct: 162 TVLECYSCATRNVFLLGFIPARSDSVVVLLCRQPC---AAQNSIKD---MNWDQEQWKPL 215
Query: 263 VA--YFVFPKEDNELRLVPGDELRLR 286
+A F+F L VP D+ ++R
Sbjct: 216 IADRCFLF-----WLVKVPSDQEQMR 236
>gi|357621770|gb|EHJ73491.1| putative nonsense-mediated mrna decay protein 1 [Danaus plexippus]
Length = 1037
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/605 (66%), Positives = 495/605 (81%), Gaps = 4/605 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++ + +RWD+GLNKK +AYF K D++++L+ GDELRLRY G+ H AW VG
Sbjct: 300 LKESQTQEGIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGEL-HKAWSGVG 358
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL++ G P++ F VDF+WKSTSFDRMQ A++ FAVD++SVS
Sbjct: 359 HVIKVPDNYGDDVGLELKSGAGAPLECTSNFVVDFIWKSTSFDRMQLALRKFAVDDSSVS 418
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIY LLGHEVE + R LP+ F AP LP+LN SQV+AVK LQRP+SLIQGPPGTGK
Sbjct: 419 GYIYRRLLGHEVEEVLFRVHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGK 478
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + +Q G VLVCAPSN AVDQL EKI TGLKVVRLCAKSREA+ S V
Sbjct: 479 TVTSATIVYQLVRQNGGPVLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSF 538
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q R L +++ SEL KL +LK+E GELS++DE++Y+AL+RA ER + +ADV+C T
Sbjct: 539 LALHEQARALGSAD-SELRKLTRLKEEAGELSAADERRYRALRRAAERRLLDAADVVCTT 597
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPR+A RF+ +LIDE Q+TEPEC++P+VLGA+Q++LVGDHCQLGPV+MCKKAA
Sbjct: 598 CVGAGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAA 657
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++P RL+VQYRMHP LS FPS+ FYEG+LQNGV+ ER+ ID
Sbjct: 658 KAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKID 717
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWP P+RPMFFYV GQEEI+ SGTSYLNRTEAANVEK+ T FL++GV P QIG+ITPY
Sbjct: 718 FPWPRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPY 777
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V +M G+L +LY+EIEVASVD+FQGREKD II+SCVRSNEHQGIGFL+DP
Sbjct: 778 EGQRSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDP 837
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YG++++GNPKVLSKQPLWN LL YKE L EGPL+NLK+S +QF KP
Sbjct: 838 RRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKERRVLTEGPLSNLKESAIQFAKP 897
Query: 839 KKIYN 843
KK+ N
Sbjct: 898 KKLVN 902
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 104/148 (70%), Gaps = 12/148 (8%)
Query: 108 NTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKW 167
++ S + +A L FEE + + Y + EHAC+YCG+ +PA VV CN+ C KW
Sbjct: 70 HSKVSSVANAIAELQFEEEDEAL----YSSKELPEHACKYCGIHDPATVVMCNI--CNKW 123
Query: 168 FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTES 227
FCN RGNTSGSHI+NHLVRAKHKE LH+D PLGET+LECY+CG RNVF+LGFI AK +S
Sbjct: 124 FCNGRGNTSGSHIINHLVRAKHKEAALHRDGPLGETLLECYSCGARNVFVLGFIPAKADS 183
Query: 228 VVVLLCREPCLNMMKESQSKDNVTIRWD 255
VVVLLCR+PC +S KD + WD
Sbjct: 184 VVVLLCRQPC---AAQSSLKD---MNWD 205
>gi|116197821|ref|XP_001224722.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178345|gb|EAQ85813.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1071
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/608 (66%), Positives = 486/608 (79%), Gaps = 9/608 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+DN+ +RWD+GLN K VA F+ PK E +++L GDE+RL+Y GD P W+ V
Sbjct: 278 LKEAQSEDNLQVRWDVGLNNKNVASFILPKIESGDVKLAVGDEMRLKYKGDLRTP-WEGV 336
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR S + VP D+ FS D+VWK+TS+DRMQ AMKTFAVDE
Sbjct: 337 GYVIKIPNNQSDEVTLELRKSGNDKSVPTDVATNFSADYVWKATSYDRMQFAMKTFAVDE 396
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
S+SGYI+H LLGHEV V ++ +P++F GLPELN SQ+ A+K+VL P+SLIQGPP
Sbjct: 397 MSLSGYIFHKLLGHEVAVAPMKTQMPKKFHVAGLPELNHSQITAIKTVLSNPLSLIQGPP 456
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 457 GTGKTVTSATIIYHLAKINNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 516
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR D++ +EL KL +LK +QGELSS DEKK+K L RA EREI +ADV
Sbjct: 517 SVSFLALHEQVRMNDSN--TELTKLARLKADQGELSSQDEKKFKQLTRAAEREILNNADV 574
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 575 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 634
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L PIRL VQYRMHP LS+FPSN FY+G+LQNGVT++ER
Sbjct: 635 KKAAKAGLNQSLFERLVKLNFTPIRLNVQYRMHPCLSKFPSNMFYDGSLQNGVTVSERLR 694
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+ +DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEKIVT FL++GV IGV
Sbjct: 695 TDVDFPWPVADTPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFLKAGVKALDIGV 754
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKE+EVASVD+FQGREKD+I+LSCVRSN++QGIGF
Sbjct: 755 ITPYEGQRSYIVSTMQNTGTFKKETYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGF 814
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VI+GNPKVLSK LW+ LL H+K+ +CLVEGPL NL+ S++Q
Sbjct: 815 LSDPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKDCKCLVEGPLTNLQTSLLQ 874
Query: 835 FQKPKKIY 842
F +PK +
Sbjct: 875 FSRPKTAF 882
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 82/128 (64%), Gaps = 16/128 (12%)
Query: 157 VRCNVPSCRKWF----CNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGC 212
++ N P K C +RGN+S SHIVNHLVRA+HKEV LH S LG+TILECYNCG
Sbjct: 86 LKLNAPEEEKELPAHACAARGNSSSSHIVNHLVRARHKEVQLHPQSSLGDTILECYNCGT 145
Query: 213 RNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGL------NKKRVAYF 266
+NVF+LGFI AK+++VVVLLCR+PC + +KD + WDI ++ + +
Sbjct: 146 KNVFMLGFIPAKSDTVVVLLCRQPC---AASTSTKD---MSWDISRWQPLIEDRSFLNWL 199
Query: 267 VFPKEDNE 274
V P D E
Sbjct: 200 VQPPTDTE 207
>gi|347965371|ref|XP_322028.4| AGAP001133-PA [Anopheles gambiae str. PEST]
gi|333470541|gb|EAA01007.4| AGAP001133-PA [Anopheles gambiae str. PEST]
Length = 1161
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/609 (64%), Positives = 487/609 (79%), Gaps = 10/609 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ IRWD GLNKK +AYF K D +++L+ GDEL+LRY G+ H W +G
Sbjct: 305 LKESQTQENIEIRWDTGLNKKTIAYFTLAKNDGDMKLMHGDELKLRYVGEL-HKPWSCIG 363
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL+ + P++ FSVDF+WK TSF+RMQ A++ FA+D SVS
Sbjct: 364 HVIKVPDNYGDDVGLELKHNHQAPIERTSNFSVDFIWKGTSFERMQQALRKFAMDAKSVS 423
Query: 359 GYIYHHLLGH----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
YIY LLG+ E + R LP+ F AP LP+LN SQV+AV+ LQRP+SLIQGPP
Sbjct: 424 NYIYARLLGNVRADGAEEVLFRLNLPKHFSAPNLPDLNRSQVYAVRHALQRPLSLIQGPP 483
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVY +A+ G +LVCAPSN AVDQL EKI T LKVVR+CA+SREA+ S
Sbjct: 484 GTGKTVTSATIVYQLARLNSGPILVCAPSNTAVDQLTEKIHRTNLKVVRVCARSREAIDS 543
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L LH Q+R++ ++ SEL KLQQLKDE GELS SDE++Y++LK+ ERE+ ++ADV
Sbjct: 544 PVSFLALHNQIRNM--AQNSELKKLQQLKDETGELSLSDERRYRSLKKQAERELLEAADV 601
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGD RL +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+MC
Sbjct: 602 ICCTCVGAGDLRLQRIKFNSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 661
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL+QSLFERLV LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+
Sbjct: 662 KKAAKAGLSQSLFERLVALGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKL 721
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP P+ PMFF V GQEEI+ SGTSYLNRTEA+NVEKI T FL++G+ P QIG+
Sbjct: 722 K-VDFPWPSPDCPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPDQIGI 780
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVR+NEHQGIGF
Sbjct: 781 ITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGF 840
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA+YGI+I+GNPKVL+KQ LWN LL YK+ + LVEG LNNLK+SM+Q
Sbjct: 841 LNDPRRLNVALTRAKYGIIIVGNPKVLAKQELWNHLLNFYKDKKVLVEGSLNNLKESMIQ 900
Query: 835 FQKPKKIYN 843
F KPKKI N
Sbjct: 901 FTKPKKIIN 909
Score = 179 bits (455), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 115/175 (65%), Gaps = 17/175 (9%)
Query: 109 TSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWF 168
T S I + L FEE D+++ E D HACRYCG+ P+ VV CN+ C+KWF
Sbjct: 74 TKLSGITSAIGELQFEEDEDEIDPAE--NKDLPPHACRYCGIHEPSTVVMCNI--CKKWF 129
Query: 169 CNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESV 228
CN RG+TSGSHIVNHLVRAKH+EV LH D PLGET+LECY+C RNVF+LGFI AK++SV
Sbjct: 130 CNGRGSTSGSHIVNHLVRAKHREVTLHADGPLGETVLECYSCAVRNVFVLGFIPAKSDSV 189
Query: 229 VVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVA--YFVF-----PKEDNELR 276
VVLLCR+PC ++ KD + WD K +A F+F P E ++LR
Sbjct: 190 VVLLCRQPC---AAQNSIKD---MNWDQEQWKPLIADRCFLFWLVKIPTEQDQLR 238
>gi|85101908|ref|XP_961233.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|11595520|emb|CAC18314.1| probable nonsense-mediated mRNA decay protein [Neurospora crassa]
gi|28922775|gb|EAA31997.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
Length = 1093
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/612 (66%), Positives = 486/612 (79%), Gaps = 9/612 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RW +GLN K VA F+ PK E +++L GDE+RL+Y G+ P W+ V
Sbjct: 301 LKEAQSEDGLQVRWHLGLNSKHVASFILPKIESGDVKLAVGDEMRLKYKGEL-RPPWEGV 359
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR S + VP + H FS D+VWK+TS+DRMQ AMKTFAVDE
Sbjct: 360 GYVIKIPNNQSDEVEVELRKSANDKSVPTECTHNFSADYVWKATSYDRMQLAMKTFAVDE 419
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV+V + T+P++F PGLPELNASQ+ A+K VL P+SLIQGPP
Sbjct: 420 MSVSGYIFHKLLGHEVQVAPTKITMPKKFHVPGLPELNASQIAAIKQVLSNPLSLIQGPP 479
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 480 GTGKTVTSATIIYHLAKMSNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 539
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR ++T+ K EL L +LK E GELSS DEK++K L R EREI Q+ADV
Sbjct: 540 SVSFLALHEQVR-MNTTNK-ELDGLVKLKTETGELSSQDEKRFKQLTRQAEREILQNADV 597
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 598 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 657
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L PIRL+VQYRMHP LSEFPSN FYEG+LQNGVT ER
Sbjct: 658 KKAAKAGLNQSLFERLVKLQFTPIRLKVQYRMHPCLSEFPSNMFYEGSLQNGVTAAERLR 717
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPVP PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV P+ IGV
Sbjct: 718 KDVDFPWPVPETPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPADIGV 777
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIVN M G +++ Y+E+EVASVD+FQGREKD+I+LSCVRSNE+QGIGF
Sbjct: 778 ITPYEGQRSYIVNTMQNTGTFKKESYREVEVASVDAFQGREKDFIVLSCVRSNENQGIGF 837
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VI+GNPKVL K LW+ LL H+K+ +CLVEGPL NL+ S++Q
Sbjct: 838 LSDPRRLNVALTRAKYGLVIIGNPKVLCKHELWHHLLVHFKDKKCLVEGPLTNLQPSLLQ 897
Query: 835 FQKPKKIYNDRR 846
F +P++ Y +R
Sbjct: 898 FGRPRQAYRPQR 909
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 97/142 (68%), Gaps = 16/142 (11%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
V+GM L + ++ E HAC YCG+ +P+ VV+C +C KWFC+++G+
Sbjct: 81 VDGMKSLKLDAPVEEKE--------LPPHACAYCGIHSPSSVVKC--LTCNKWFCSAKGS 130
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
SHIVNHLVRA+HKEV LH +S LG+T+LECYNCG +NVF+LGFI AK+++VVVLLCR
Sbjct: 131 AFSSHIVNHLVRARHKEVQLHPESSLGDTVLECYNCGTKNVFILGFIPAKSDTVVVLLCR 190
Query: 235 EPCLNMMKESQSKDNVTIRWDI 256
+PC + +KD + WDI
Sbjct: 191 QPC---GASTSTKD---MSWDI 206
>gi|195356067|ref|XP_002044503.1| GM13241 [Drosophila sechellia]
gi|194131805|gb|EDW53739.1| GM13241 [Drosophila sechellia]
Length = 1180
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/609 (64%), Positives = 488/609 (80%), Gaps = 10/609 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRL Y G+ +P W +G
Sbjct: 297 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYNP-WSEIG 355
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL++S PV F+VDF+WK TSFDRM A++ FA+D SVS
Sbjct: 356 HVIKVPDNFGDDVGLELKSSTSAPVKCTSNFTVDFIWKCTSFDRMTRALRKFAIDRNSVS 415
Query: 359 GYIYHHLLGH----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
+IY LLGH + + R P+ F AP LP+LN SQV+AVK LQRP+SLIQGPP
Sbjct: 416 NFIYSRLLGHGRANSNDEVLFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVY + K G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+ S
Sbjct: 476 GTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDS 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L LH Q+R+++T+ SEL KLQQLKDE GELSS+DEK+Y++LKRA+E ++ ++ADV
Sbjct: 536 PVSFLALHNQIRNMETN--SELKKLQQLKDETGELSSADEKRYRSLKRASENQLLEAADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+MC
Sbjct: 594 ICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL 713
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP P RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++G+ P QIG+
Sbjct: 714 K-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGI 772
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIGF
Sbjct: 773 ITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGF 832
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA++GI+I+GNPKVL+KQ LWN LL YK+ + LVEG LNNLK+S++
Sbjct: 833 LNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIH 892
Query: 835 FQKPKKIYN 843
FQKPKK+ N
Sbjct: 893 FQKPKKLVN 901
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 120/185 (64%), Gaps = 18/185 (9%)
Query: 99 SKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVR 158
S+R A +S + + I +A L FEE DD G Y K + HAC+YCG+ +PA VV
Sbjct: 57 SRRSAGDS-HPRLASITNDLADLQFEEE-DDEPGSSYVK-ELPPHACKYCGIHDPATVVM 113
Query: 159 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 218
CN +CRKWFCN RG+TSGSHI+NHLVRAKH+EV LH + PLGETILECY+CG RNVF+L
Sbjct: 114 CN--NCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVL 171
Query: 219 GFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVF-------PKE 271
GFI AK +SVVVLLCR+PC ++ KD + WD K +A F P E
Sbjct: 172 GFIPAKADSVVVLLCRQPC---AAQNSLKD---MNWDQEQWKPLIADRCFLAWLVKQPSE 225
Query: 272 DNELR 276
+LR
Sbjct: 226 QGQLR 230
>gi|195553850|ref|XP_002076779.1| GD24645 [Drosophila simulans]
gi|194202769|gb|EDX16345.1| GD24645 [Drosophila simulans]
Length = 1180
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/644 (62%), Positives = 499/644 (77%), Gaps = 12/644 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRL Y G+ +P W VG
Sbjct: 297 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGEMYNP-WSEVG 355
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL++S PV F+VDF+WK TSFDRM A++ FA+D SVS
Sbjct: 356 HVIKVPDNFGDDVGLELKSSTSAPVKCTSNFTVDFIWKCTSFDRMTRALRKFAIDRNSVS 415
Query: 359 GYIYHHLLGH----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
+IY LLGH + + R P+ F AP LP+LN SQV+AVK LQRP+SLIQGPP
Sbjct: 416 NFIYSRLLGHGRADSNDEVLFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVY + K G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+ S
Sbjct: 476 GTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDS 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L LH Q+R+++T+ SEL KLQQLKDE GELSS+DEK+Y++LKRA+E ++ ++ADV
Sbjct: 536 PVSFLALHNQIRNMETN--SELKKLQQLKDETGELSSADEKRYRSLKRASENQLLEAADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+MC
Sbjct: 594 ICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL 713
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP P RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++G+ P QIG+
Sbjct: 714 K-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGI 772
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIGF
Sbjct: 773 ITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGF 832
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA++GI+I+GNPKVL+KQ LWN LL YK+ + LVEG LNNLK+S++
Sbjct: 833 LNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIH 892
Query: 835 FQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNA--DRRGSRARG 876
FQKPKK+ N + I+ + P + DR G +G
Sbjct: 893 FQKPKKLVNSMNIGAHFMSNIIADAKEVMVPGSIYDRSGGYGQG 936
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 120/185 (64%), Gaps = 18/185 (9%)
Query: 99 SKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVR 158
S+R A +S + + I +A L FEE DD G Y K + HAC+YCG+ +PA VV
Sbjct: 57 SRRSAGDS-HPRLASITNDLADLQFEEE-DDEPGSSYVK-ELPPHACKYCGIHDPATVVM 113
Query: 159 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 218
CN +CRKWFCN RG+TSGSHI+NHLVRAKH+EV LH + PLGETILECY+CG RNVF+L
Sbjct: 114 CN--NCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVL 171
Query: 219 GFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVF-------PKE 271
GFI AK +SVVVLLCR+PC ++ KD + WD K +A F P E
Sbjct: 172 GFIPAKADSVVVLLCRQPC---AAQNSLKD---MNWDQEQWKPLIADRCFLAWLVKQPSE 225
Query: 272 DNELR 276
+LR
Sbjct: 226 QGQLR 230
>gi|340914927|gb|EGS18268.1| eliminates the production of nonsense-containing-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1098
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/612 (66%), Positives = 480/612 (78%), Gaps = 9/612 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+DN+ +RWD+GLN K + F+ PK E +++L GDE+RL+Y GD P W+ V
Sbjct: 302 LKEAQSEDNLQVRWDMGLNNKHLVSFILPKIESGDVKLAVGDEMRLKYKGDL-RPYWEGV 360
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR S + VP D+ FS D+VWK+TS+DRMQ AMKTFAVDE
Sbjct: 361 GYVIKIPNNQSDEVTLELRKSPNDKSVPTDVTTCFSADYVWKATSYDRMQAAMKTFAVDE 420
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV V ++ LP++F PGLPELN SQ+ A+K+VL P+SLIQGPP
Sbjct: 421 MSVSGYIFHKLLGHEVAVAPMKTQLPKKFHVPGLPELNHSQITAIKTVLSTPLSLIQGPP 480
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+ K QVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 481 GTGKTVTSATIIYHLCKMNNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 540
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V+ L LH QVR + +L KL QLK E GELSS DEKK K L R EREI +ADV
Sbjct: 541 SVKFLALHEQVRM--HTGNPDLRKLAQLKAEVGELSSQDEKKLKQLTRQAEREILANADV 598
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQ VLVGDH QLGPVIM
Sbjct: 599 VCCTCVGAGDPRLAKMKFRNVLIDESTQSAEPECMIPLVLGCKQAVLVGDHKQLGPVIMN 658
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L PIRL VQYRMHP LSEFPSN FYEG+LQNGVT ER
Sbjct: 659 KKAAKAGLNQSLFERLVKLNLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTHAERIR 718
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEAANVEK+VT F ++GV PS IGV
Sbjct: 719 KDVDFPWPVADMPMMFWSNLGSEEISASGTSYLNRTEAANVEKVVTRFFKAGVKPSDIGV 778
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKE+EVASVD+FQGREKDYI+LSCVRSN++QGIGF
Sbjct: 779 ITPYEGQRSYIVSTMQNTGTFKKEWYKEVEVASVDAFQGREKDYIVLSCVRSNDNQGIGF 838
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VI+GNPKVL+K LW+ LL H+K+ +CLVEGPLNNL+ S++Q
Sbjct: 839 LSDPRRLNVALTRAKYGLVIIGNPKVLAKHELWHHLLVHFKDRKCLVEGPLNNLQTSLLQ 898
Query: 835 FQKPKKIYNDRR 846
F KPK Y R
Sbjct: 899 FPKPKTAYRQPR 910
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 89/114 (78%), Gaps = 8/114 (7%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +PA VV+C +C KWFC++RGN+S SHI+NHLVRA+HKEV LH S LG+
Sbjct: 102 HACAYCGIHSPASVVKC--LTCEKWFCSARGNSSSSHIINHLVRARHKEVQLHPQSSLGD 159
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
TILECYNCG +NVFLLGFI AK+++VVVLLCR+PC + +KD + WD+
Sbjct: 160 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPC---AASTSAKD---MSWDV 207
>gi|194889307|ref|XP_001977057.1| GG18821 [Drosophila erecta]
gi|190648706|gb|EDV45984.1| GG18821 [Drosophila erecta]
Length = 1186
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/609 (64%), Positives = 484/609 (79%), Gaps = 10/609 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRL Y G+ P W +G
Sbjct: 297 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYIP-WSEIG 355
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL+ S PV F+VDF+WK TSFDRM A++ FA+D SVS
Sbjct: 356 HVIKVPDNFGDDVGLELKTSSNAPVKCTSNFTVDFIWKCTSFDRMTRALRKFAIDRNSVS 415
Query: 359 GYIYHHLLGH----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
YIY LLGH + + R P+ + AP LP+LN SQV+AVK LQRP+SLIQGPP
Sbjct: 416 NYIYSRLLGHGRPDSNDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVY + K G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+ S
Sbjct: 476 GTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDS 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L LH Q+R+++T+ SEL KLQQLKDE GELSS+DEK+Y+ LKRA E ++ ++ADV
Sbjct: 536 PVSFLALHNQIRNMETN--SELKKLQQLKDETGELSSADEKRYRILKRAAENQLLEAADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+MC
Sbjct: 594 ICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL 713
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP P RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++G+ P QIG+
Sbjct: 714 K-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGI 772
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIGF
Sbjct: 773 ITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGF 832
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA+YGI+I+GNPKVL+KQ LWN LL YK+ + LVEG LNNLK+S++
Sbjct: 833 LNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIH 892
Query: 835 FQKPKKIYN 843
FQKPKK+ N
Sbjct: 893 FQKPKKLVN 901
Score = 179 bits (454), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 117/183 (63%), Gaps = 17/183 (9%)
Query: 101 RGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCN 160
R + +N + I +A L FEE DD G Y K + HAC+YCG+ +PA VV CN
Sbjct: 58 RRSGGDANPRLASITNDLADLQFEEE-DDEGGSSYVK-ELPVHACKYCGIHDPATVVMCN 115
Query: 161 VPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGF 220
+CRKWFCN RG+TSGSHI+NHLVRAKH+EV LH + PLGETILECY+CG RNVF+LGF
Sbjct: 116 --NCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVLGF 173
Query: 221 ISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVF-------PKEDN 273
I AK +SVVVLLCR+PC ++ KD + WD K +A F P E
Sbjct: 174 IPAKADSVVVLLCRQPC---AAQNSLKD---MNWDQEQWKPLIADRCFLPWLVKQPSEQG 227
Query: 274 ELR 276
+LR
Sbjct: 228 QLR 230
>gi|171693713|ref|XP_001911781.1| hypothetical protein [Podospora anserina S mat+]
gi|170946805|emb|CAP73609.1| unnamed protein product [Podospora anserina S mat+]
Length = 1090
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/611 (65%), Positives = 481/611 (78%), Gaps = 9/611 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D++ +RWD+GLN K +A F+ PK E +++L GDE+R++Y G+ P W+ V
Sbjct: 292 LKEAQSEDHLVVRWDMGLNNKHLASFILPKIESGDVKLAVGDEMRIKYKGELRAP-WEGV 350
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + + VP + H FS D+VWK+TS+DRMQ AMKTFAVDE
Sbjct: 351 GYVIKIPNNQSDEVTLELRKAANDKSVPTECTHNFSADYVWKATSYDRMQFAMKTFAVDE 410
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV V ++ +P+RF PGLPELN SQ+ A+K+VL P+SLIQGPP
Sbjct: 411 LSVSGYIFHKLLGHEVAVAPMKTQMPKRFHVPGLPELNHSQITAIKTVLSTPLSLIQGPP 470
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+A+ QVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 471 GTGKTVTSATIIYHLARMNNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 530
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR S SEL L +LK GELSS DEK++K L R EREI SADV
Sbjct: 531 SVSFLALHEQVRLYKQS--SELTNLNKLKAAAGELSSQDEKRFKQLTRQAEREILNSADV 588
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 589 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 648
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L PIRL VQYRMHP LSEFPSN FYEG+LQNGVTI ER
Sbjct: 649 KKAAKAGLNQSLFERLVKLNLVPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTITERLR 708
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV PM F+ +G EEISASGTSYLNRTEA+NVEKIVT F ++GV PS IGV
Sbjct: 709 KDVDFPWPVAETPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVKPSDIGV 768
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKE+EVASVD+FQGREKD+I+LSCVRSN++QGIGF
Sbjct: 769 ITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGF 828
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VI+GNPKVLSK LW+ LL H+K+ +CLVEGPL NL+ S++Q
Sbjct: 829 LSDPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKDRKCLVEGPLTNLQTSLIQ 888
Query: 835 FQKPKKIYNDR 845
F +PK + R
Sbjct: 889 FSRPKMSFRPR 899
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 89/114 (78%), Gaps = 6/114 (5%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +P+CVV+C C KWFC++RGN+S SHIVNHLVRA+HKEV LH +S LG+
Sbjct: 90 HACAYCGIHSPSCVVKCIAKECNKWFCSARGNSSSSHIVNHLVRARHKEVQLHPESALGD 149
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
T LECYNCG +NVF+LGFI AK+++VVVLLCR+PC S +KD + WD+
Sbjct: 150 TTLECYNCGNKNVFMLGFIPAKSDTVVVLLCRQPC---AAGSSAKD---MSWDV 197
>gi|336263126|ref|XP_003346344.1| hypothetical protein SMAC_07821 [Sordaria macrospora k-hell]
gi|380091672|emb|CCC10804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1093
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/612 (65%), Positives = 486/612 (79%), Gaps = 9/612 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RW +GLN K VA F+ PK E +++L GDE+RL+Y G+ P W+ V
Sbjct: 301 LKEAQSEDGLQVRWHLGLNSKHVASFILPKIESGDVKLAVGDEMRLKYKGEL-RPPWEGV 359
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV +ELR S + VP + H FS D+VWK+TS+DRMQ AMKTFAVDE
Sbjct: 360 GYVIKIPNNQSDEVEVELRKSANDKSVPTECTHNFSADYVWKATSYDRMQLAMKTFAVDE 419
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV+V + T+P++F PGLPELNASQ+ A+K VL P+SLIQGPP
Sbjct: 420 MSVSGYIFHKLLGHEVQVAPTKITMPKKFHVPGLPELNASQIAAIKQVLSNPLSLIQGPP 479
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 480 GTGKTVTSATIIYHLAKMSNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 539
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR ++T+ K EL L +LK E GELSS DEK++K L R EREI Q+ADV
Sbjct: 540 SVSFLALHEQVR-MNTTNK-ELDGLVKLKTETGELSSQDEKRFKQLTRQAEREILQNADV 597
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 598 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 657
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L PIRL+VQYRMHP LSEFPSN FY+G+LQNGVT ER
Sbjct: 658 KKAAKAGLNQSLFERLVKLQFTPIRLKVQYRMHPCLSEFPSNMFYDGSLQNGVTAAERLR 717
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPVP PM F+ +G EEISASGTSYLNRTEAANVEKIVT F ++GV P+ IGV
Sbjct: 718 KDVDFPWPVPETPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPADIGV 777
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIVN M G +++ Y+E+EVASVD+FQGREK++I+LSCVRSNE+QGIGF
Sbjct: 778 ITPYEGQRSYIVNTMQNTGTFKKESYREVEVASVDAFQGREKEFIVLSCVRSNENQGIGF 837
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VI+GNPKVL K LW+ LL H+K+ +CLVEGPL NL+ S++Q
Sbjct: 838 LSDPRRLNVALTRAKYGLVIIGNPKVLCKHELWHHLLVHFKDKKCLVEGPLTNLQPSLLQ 897
Query: 835 FQKPKKIYNDRR 846
F +P++ Y +R
Sbjct: 898 FGRPRQAYRPQR 909
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 106/166 (63%), Gaps = 22/166 (13%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
V+GM L + ++ E HAC YCG+ +P+ VV+C +C KWFC+++G+
Sbjct: 81 VDGMKSLKLDAPVEEKE--------LPPHACAYCGIHSPSSVVKC--LACNKWFCSAKGS 130
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
SHIVNHLVRA+HKEV LH +S LG+T+LECYNCG +NVF+LGFI AK+++VVVLLCR
Sbjct: 131 GFSSHIVNHLVRARHKEVQLHPESSLGDTVLECYNCGTKNVFILGFIPAKSDTVVVLLCR 190
Query: 235 EPCLNMMKESQSKDNVTIRWDIGL------NKKRVAYFVFPKEDNE 274
+PC + +KD + WDI ++ +++ V P D E
Sbjct: 191 QPC---GASTSTKD---MSWDISRWQPLIEDRAFLSWLVTPPTDAE 230
>gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
gi|220960128|gb|ACL92600.1| Upf1-PA [synthetic construct]
Length = 1180
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/609 (64%), Positives = 485/609 (79%), Gaps = 10/609 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES +++N+ +RWD+GLNKK +AYF K D++++L+ GDELRL Y G+ +P W +G
Sbjct: 297 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYNP-WSEIG 355
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ ++V LEL++S PV F+VDF+WK TSFDRM A+ FA+D SVS
Sbjct: 356 HVIKVPDNFGDDVGLELKSSTNAPVKCTSNFTVDFIWKCTSFDRMTRALCKFAIDRNSVS 415
Query: 359 GYIYHHLLGH----EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
+IY LLGH + + R P+ F AP LP+LN SQV+AVK LQRP+SLIQGPP
Sbjct: 416 NFIYSRLLGHGRADSNDEVLFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA IVY + K G VLVCAPSN AVDQL EKI T LKVVR+CAKSREA+ S
Sbjct: 476 GTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDS 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L LH Q+R+++T+ SEL KLQQLKDE GELSS+DEK+Y+ LKRA E ++ ++ADV
Sbjct: 536 PVSFLALHNQIRNMETN--SELKKLQQLKDETGELSSADEKRYRNLKRAAENQLLEAADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGD RL+ +F +LIDES Q+TEPEC++P+VLGAKQ++LVGDHCQLGPV+MC
Sbjct: 594 ICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R+
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL 713
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP P RPMFF V GQEEI+ SGTS+LNRTEAANVEKI T FL++G+ P QIG+
Sbjct: 714 K-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGI 772
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQRAY+V YM G+L +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIGF
Sbjct: 773 ITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGF 832
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
LNDPRRLNVALTRA++GI+I+GNPKVL+KQ LWN LL YK+ + LVEG LNNLK+S++
Sbjct: 833 LNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIH 892
Query: 835 FQKPKKIYN 843
FQKPKK+ N
Sbjct: 893 FQKPKKLVN 901
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 119/185 (64%), Gaps = 17/185 (9%)
Query: 99 SKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVR 158
++R + S+ + I +A L FEE DD G Y K + HAC+YCG+ +PA VV
Sbjct: 56 AQRCSAGDSHPRLASITNDLADLQFEEE-DDEPGSSYVK-ELPPHACKYCGIHDPATVVM 113
Query: 159 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 218
CN +CRKWFCN RG+TSGSHI+NHLVRAKH+EV LH + PLGETILECY+CG RNVF+L
Sbjct: 114 CN--NCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVL 171
Query: 219 GFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVF-------PKE 271
GFI AK +SVVVLLCR+PC ++ KD + WD K +A F P E
Sbjct: 172 GFIPAKADSVVVLLCRQPC---AAQNSLKD---MNWDQEQWKPLIADRCFLAWLVKQPSE 225
Query: 272 DNELR 276
+LR
Sbjct: 226 QGQLR 230
>gi|429860740|gb|ELA35464.1| ATP-dependent helicase nam7 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1088
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/611 (65%), Positives = 481/611 (78%), Gaps = 9/611 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D +T+RWD GLN K + F K E +++L GDE+RLRY G+ PAW+ V
Sbjct: 294 LKEAQSEDGLTVRWDYGLNNKHLVSFELHKIESGDVKLAVGDEMRLRYKGEL-RPAWEGV 352
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + + VP + H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 353 GYVIKIPNNQSDEVTLELRKAGNEKTVPTECTHNFSADYVWKATSYDRMQYAMKTFAVDD 412
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGH+V V + T+P++F PGLP+LN SQ+ A+K+VL P+SLIQGPP
Sbjct: 413 MSVSGYIFHKLLGHDVAVAPQKTTMPKKFSVPGLPDLNTSQIAAIKAVLSTPLSLIQGPP 472
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+ K GQVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 473 GTGKTVTSATIIYHLCKMNNGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 532
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR D++ EL KL QLK E GELSS DEKK+K L +A ER+I +ADV
Sbjct: 533 SVSFLALHEQVRMNDSN--GELVKLAQLKSELGELSSQDEKKFKQLTKAAERDILHNADV 590
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 591 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 650
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L PIRL +QYRMHP LSEFPSN FY+G+LQNGVT ER
Sbjct: 651 KKAAKAGLNQSLFERLVNLRLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHRERLR 710
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEK+VT F ++GV P IGV
Sbjct: 711 RDVDFPWPVADMPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPGDIGV 770
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKE+EVASVD+FQGREKD+I+LSCVRSN++QGIGF
Sbjct: 771 ITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGF 830
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VI+GNPKVLSK LW+ LL H+KE +CLVEGPL NL+ S++Q
Sbjct: 831 LSDPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKERKCLVEGPLTNLQTSLLQ 890
Query: 835 FQKPKKIYNDR 845
F KP+ Y +
Sbjct: 891 FGKPRTAYRQK 901
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 5/113 (4%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +P+ VV+C C KWFC++RGN + SHIVNHLVRA+HKEV LH +S LG+
Sbjct: 94 HACAYCGIHSPSSVVKC--LGCNKWFCSARGNATSSHIVNHLVRARHKEVQLHPESTLGD 151
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPC-LNMMKESQSKDNVTIRW 254
T+LECYNCG +NVFLLGFI AK+++VVVLLCR+PC N + S D T RW
Sbjct: 152 TVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAANTSSKDMSWD--TSRW 202
>gi|118489512|gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 582
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/447 (90%), Positives = 420/447 (93%), Gaps = 7/447 (1%)
Query: 593 MCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
MCKKAARAGLAQSLFERLVLLG+KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVT+NER
Sbjct: 1 MCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNER 60
Query: 653 QSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQI 712
QSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQI
Sbjct: 61 QSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQI 120
Query: 713 GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGI 772
GVITPYEGQRAYIVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGI
Sbjct: 121 GVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGI 180
Query: 773 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSM 832
GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSM
Sbjct: 181 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSM 240
Query: 833 VQFQKPKKIYNDRRLFFGAGPGIVPND----ISTSNPNADRRGSRARG-YMPPGPPNGTH 887
VQFQKPKKIYNDRRLFFG GPGIVPND +++++PNADRR SRARG YMPP PPNGTH
Sbjct: 241 VQFQKPKKIYNDRRLFFGGGPGIVPNDNFGSVASASPNADRRNSRARGSYMPPAPPNGTH 300
Query: 888 KPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGS 947
KPG HPAGFPMPRVP+PPF G PPSQPYAIP+RGAVHGP+GAV VP PGSRGFGAGRG+
Sbjct: 301 KPGAHPAGFPMPRVPIPPFHGDPPSQPYAIPTRGAVHGPIGAVPQVPQPGSRGFGAGRGN 360
Query: 948 AGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQ 1007
AGAPIGSHL HQQ TQQ IG IGS FNF SLEN NSQPSVG L+QPG+ NN+PVQG SQ
Sbjct: 361 AGAPIGSHLPHQQGTQQGIGNIGS-FNFSSLENPNSQPSVGSALSQPGY-NNIPVQGSSQ 418
Query: 1008 TFRDGFSVGSMSQDFLGDDFKSQGSHV 1034
TFRDGFS+G MSQ+FLGDDFKSQGSHV
Sbjct: 419 TFRDGFSMGGMSQEFLGDDFKSQGSHV 445
>gi|358341434|dbj|GAA49117.1| regulator of nonsense transcripts 1 [Clonorchis sinensis]
Length = 1183
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/744 (58%), Positives = 521/744 (70%), Gaps = 59/744 (7%)
Query: 104 NNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPS 163
NN N+ QI++ T DD + + + EHAC YCG+ +PACVV CN +
Sbjct: 68 NNRINSLGQQILD-------LTTKDDDQ--DEANSQLPEHACAYCGIHDPACVVYCN--T 116
Query: 164 CRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA 223
+KWFCN RGNTSG + + + K PL E I A
Sbjct: 117 TKKWFCNGRGNTSGRYKSSLQYQMTFK--------PLVE------------------IEA 150
Query: 224 KTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVFP--KEDNELRLVPGD 281
+ V KES +NV +RW+ LN+K VAYF P E ELR++ GD
Sbjct: 151 AYDQKV------------KESLKLENVVVRWETALNRKHVAYFRIPGANEGPELRIMHGD 198
Query: 282 ELRLRYSGDAAHPAWQSVGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTS 339
EL +R + W VGHVIK+ +EV LE++ + VP D + V+F WKST
Sbjct: 199 ELIIRRF-NTPDSNWSGVGHVIKIPDNFSDEVGLEMKQADVVPSDPVT-YMVEFKWKSTP 256
Query: 340 FDRMQGAMKTFAVDETSV-SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFA 398
FDRM A+ ++ + YI++ LLGHE++ +++ LP+R+ AP LPELN SQVFA
Sbjct: 257 FDRMIQAISKVTEEQCDLLPPYIFYRLLGHEMDDMVLKCNLPKRYSAPDLPELNHSQVFA 316
Query: 399 VKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATG 458
VK+VLQRP+SLIQGPPGTGKTVTSA+IVYH+ K Q +VLV APSN AVDQL EKIS TG
Sbjct: 317 VKTVLQRPLSLIQGPPGTGKTVTSASIVYHLNKIHQKKVLVVAPSNTAVDQLCEKISRTG 376
Query: 459 LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK 518
LKVVRLCA+SREA++SPV HL LH Q +H+ SEL KLQQLKDE GELS +DEK+Y+
Sbjct: 377 LKVVRLCARSREALASPVSHLMLHVQAQHVKG--HSELRKLQQLKDETGELSQADEKRYR 434
Query: 519 ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
LKR ERE+ +ADV+CCTCV AGD RL F VLIDESTQATEPECLIPL++G +Q
Sbjct: 435 LLKRELERELLVAADVVCCTCVTAGDQRLERLSFHSVLIDESTQATEPECLIPLMVGCRQ 494
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSF 638
VVLVGDHCQLGPVI CKKAA AGL QSLFER VLLG++P+RLQVQYRMHP+LS FPSN F
Sbjct: 495 VVLVGDHCQLGPVITCKKAANAGLTQSLFERFVLLGIRPMRLQVQYRMHPALSAFPSNVF 554
Query: 639 YEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKI 698
YEG+LQNGVT +R IDFPWP P+RPMFFY GQEEIS +G SYLNRTEAA VEKI
Sbjct: 555 YEGSLQNGVTAEDR-CKQIDFPWPNPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKI 613
Query: 699 VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
VT L+ GV P+ IGVITPYEGQRAY+ +Y+ +G+L +LY+EIE+ASVD+FQGREKDY
Sbjct: 614 VTKMLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGSLNSKLYQEIEIASVDAFQGREKDY 673
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IILSCVR+NE+QGIGFLNDPRRLNVALTRARYG++++GNPK L KQPLWN LL Y+E
Sbjct: 674 IILSCVRANENQGIGFLNDPRRLNVALTRARYGLIVVGNPKALCKQPLWNQLLHFYREQH 733
Query: 819 CLVEGPLNNLKQSMVQFQKPKKIY 842
LVEGPLNNL + M+QF KPK Y
Sbjct: 734 LLVEGPLNNLAEYMLQFPKPKVPY 757
>gi|406864055|gb|EKD17101.1| RNA helicase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1098
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/656 (64%), Positives = 503/656 (76%), Gaps = 32/656 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + IRWD GLN K +A FV PK E +++L GDE+RL+Y G+ P W+ V
Sbjct: 297 LKEAQSEDGLIIRWDYGLNNKHLASFVLPKIELGDVKLAVGDEMRLKYKGEL-RPFWEGV 355
Query: 300 GHVIKL--TAQEEVALELRA---SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+V+K+ +EV +ELR + VP + H FS D+VWK+TS+DRMQ AMKTFA+DE
Sbjct: 356 GYVVKIPNNQSDEVTIELRKVGNDKSVPTECTHNFSADYVWKATSYDRMQFAMKTFAIDE 415
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 416 MSVSGYIFHKLLGHEVAAAPMKIQMPKKFTVPGLPELNNSQINAVKSVLQKPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA ++YH+AK GQVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 476 GTGKTVTSATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVQS 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L+LH QVR D++ EL KL QLK E GELSS DEKK+K L R EREI +ADV
Sbjct: 536 SVGFLSLHEQVRMNDSN--LELTKLSQLKSELGELSSQDEKKFKTLTRGAEREILTNADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 594 ICCTCVGAGDPRLAKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV LG PIRL VQYRMHP LSEFPSN FYEG+LQNGVT+ +R
Sbjct: 654 KKAAKAGLNQSLFERLVQLGQNPIRLDVQYRMHPCLSEFPSNMFYEGSLQNGVTMVQRIR 713
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEKIVT F ++GV P+ IGV
Sbjct: 714 CDVDFPWPVSDTPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQPADIGV 773
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V+ M G +++ YKEIEVASVD+FQGREKD+I+LSCVRSN+HQGIGF
Sbjct: 774 ITPYEGQRSYVVSSMQNTGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGF 833
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LL H+KE +CLVEGPL+NL+ S++Q
Sbjct: 834 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHHLLLHFKERDCLVEGPLSNLQTSLLQ 893
Query: 835 FQKPKKIY-------------NDR--------RLFFGAGP--GIVPNDISTSNPNA 867
F +PK Y N R R F AG G VP+D+S+ + +A
Sbjct: 894 FSRPKSTYRGPQRYQMSHASFNGRSGTNGKAPRDFSDAGSMMGYVPDDVSSVHSSA 949
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 86/114 (75%), Gaps = 8/114 (7%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +P+ VV+C C KWFC++RGN + SHIVNHLVRA+HKEV LH S LG+
Sbjct: 97 HACAYCGIHSPSSVVKC--LGCTKWFCSARGNATSSHIVNHLVRARHKEVQLHPLSTLGD 154
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
T+LECY CG +NVFLLGFI AK+++VVVLLCR+PC + SKD + WDI
Sbjct: 155 TVLECYICGTKNVFLLGFIPAKSDTVVVLLCRQPCAST---PSSKD---MSWDI 202
>gi|322701174|gb|EFY92925.1| Regulator of nonsense transcripts 1 [Metarhizium acridum CQMa 102]
Length = 1083
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/621 (64%), Positives = 489/621 (78%), Gaps = 12/621 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD GLN K + F K E +++L GDE+RLRY+G+ P W+ V
Sbjct: 294 LKEAQSEDGLIVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYNGELREP-WEGV 352
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ + +EV LELR + + VP D++H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 353 GYVIKIPNSQSDEVCLELRKTGNDKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDD 412
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV++Q V++ LPR++ APGLP+LN SQV A+KSVLQ+P+SLIQGPP
Sbjct: 413 MSVSGYIFHTLLGHEVQLQPVQSRLPRKWSAPGLPDLNQSQVDAIKSVLQKPLSLIQGPP 472
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E+I T LKVVRL AKSRE V S
Sbjct: 473 GTGKTVTSATIIYHLAKMSGNQVLVCAPSNVAVDQLCERIHRTNLKVVRLTAKSREDVES 532
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR + SEL KL QLK++ GELSS DEKK+K L +A EREI +ADV
Sbjct: 533 SVSFLALHEQVRL--SEHNSELVKLSQLKNDVGELSSQDEKKFKQLTKAAEREILNNADV 590
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 591 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 650
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERL+ L L PIRL QYRMHP LSEFPSN FY+G+LQNG+T +R
Sbjct: 651 KKAAKAGLNQSLFERLIKLQLAPIRLTTQYRMHPCLSEFPSNMFYDGSLQNGITHEQRLR 710
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP+ PM F+ +G EEIS SGTSYLNRTEA+NVEK VT F ++GV PS+IGV
Sbjct: 711 KDVDFPWPIAETPMMFWSNLGNEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSEIGV 770
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV M +G +++ YKE+EVASVD+FQGREKD+I+LSCVRSNE+QGIGF
Sbjct: 771 ITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGF 830
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK LW+ LL H+K+ +C VEGPL NL+ ++Q
Sbjct: 831 LSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQ 890
Query: 835 FQKPKKIYNDRRLF---FGAG 852
F +PK + + + +GAG
Sbjct: 891 FSRPKVSFRQKNNYQSQYGAG 911
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 101/142 (71%), Gaps = 16/142 (11%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
VEGM+GL + ++ E HAC YCG+ +PACVV+C +C KWFC+++GN
Sbjct: 74 VEGMSGLKLKTVDEEKE--------LPPHACAYCGIHSPACVVKC--LTCNKWFCSAKGN 123
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
+ +HIVNHLVRA+HKEV LH +S LG+T+LECYNCG +N FLLGFI AK+++VVVLLCR
Sbjct: 124 GTSTHIVNHLVRARHKEVQLHPESTLGDTVLECYNCGTKNAFLLGFIPAKSDTVVVLLCR 183
Query: 235 EPCLNMMKESQSKDNVTIRWDI 256
+PC + + +KD + WDI
Sbjct: 184 QPCAS---STSTKD---MNWDI 199
>gi|342879017|gb|EGU80294.1| hypothetical protein FOXB_09221 [Fusarium oxysporum Fo5176]
Length = 1083
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/620 (64%), Positives = 488/620 (78%), Gaps = 11/620 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD GLN K + F K E +++L GDE+RLRY G+ P W+ V
Sbjct: 293 LKEAQSEDGLLVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYKGELRSP-WEGV 351
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + + VP D++H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 352 GYVIKIPNNQSDEVTLELRKTGNEKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDD 411
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV++Q+++ LP+++ APGLP+LN SQV A+K+VLQ+P+SLIQGPP
Sbjct: 412 MSVSGYIFHTLLGHEVQLQVMKTNLPKKWSAPGLPDLNPSQVGAIKAVLQKPLSLIQGPP 471
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E++ TGLKVVRL AKSRE V S
Sbjct: 472 GTGKTVTSATIIYHLAKMSGNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVES 531
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR + SEL KL QLK+E GELSS DEKKYK L + ER+I +ADV
Sbjct: 532 SVSFLALHEQVRM--SEHNSELVKLSQLKNELGELSSQDEKKYKQLTKIAERDILNNADV 589
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 590 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 649
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L PIRL +QYRMHP LSEFPSN FY+G+LQNGVT R
Sbjct: 650 KKAAKAGLNQSLFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLR 709
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV PM F+ +G EEISASGTSYLNRTEA+NVEK VT F ++GV P+ IGV
Sbjct: 710 KDVDFPWPVGEMPMMFWSNLGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADIGV 769
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV M +G +++ YKE+EVASVD+FQGREKD+I+LSCVRSN++QGIGF
Sbjct: 770 ITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGF 829
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK LW+ LL H+K+ +C VEGPL NL+ ++Q
Sbjct: 830 LSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQ 889
Query: 835 FQKPKKIY--NDRRLFFGAG 852
F +PK Y +++ FGAG
Sbjct: 890 FSRPKVSYRQKNQQPQFGAG 909
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 108/172 (62%), Gaps = 19/172 (11%)
Query: 84 NHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEH 143
N R +D + + N+S N S ++G+ GL + G D E + H
Sbjct: 45 NGRRRADDDDNQTEAFEEDDNDSLN---SVPIDGLTGLKLK--GQDEE------KELPAH 93
Query: 144 ACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGET 203
AC YCG+ +P CVV+C +C KWFC++RGN + +HIVNHLVRA+HKEV LH +S LG+T
Sbjct: 94 ACAYCGIHSPGCVVKC--LTCNKWFCSARGNGTSTHIVNHLVRARHKEVQLHPESTLGDT 151
Query: 204 ILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+LECYNCG +N FLLGFI AK+++VVVLLCR+PC + + N + WD
Sbjct: 152 VLECYNCGTKNAFLLGFIPAKSDTVVVLLCRQPC------AANTSNKDMNWD 197
>gi|310800151|gb|EFQ35044.1| RNA helicase [Glomerella graminicola M1.001]
Length = 1086
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/611 (64%), Positives = 482/611 (78%), Gaps = 9/611 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D +T+RWD GLN K + F K E +++L GDE+RLRY G+ P W+ V
Sbjct: 294 LKEAQSEDGLTVRWDYGLNNKHLVSFELHKIESGDVKLAVGDEMRLRYKGEL-RPTWEGV 352
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + + VP + H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 353 GYVIKIPNNQSDEVTLELRKAGNEKTVPTECTHNFSADYVWKATSYDRMQYAMKTFAVDD 412
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGH+V V ++ T+P+++ PGLP+LN SQ+ A+K+VL P+SLIQGPP
Sbjct: 413 MSVSGYIFHKLLGHDVAVAPMKTTMPKKYSVPGLPDLNTSQIAAIKAVLSTPLSLIQGPP 472
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+ K GQVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 473 GTGKTVTSATIIYHLCKMNNGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 532
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR D++ EL KL QLK E GELSS DEKK+K L +A ER+I +ADV
Sbjct: 533 SVSFLALHEQVRMNDSN--GELVKLAQLKSELGELSSQDEKKFKQLTKAAERDILHNADV 590
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 591 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 650
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L PIRL +QYRMHP LSEFPSN FY+G+LQNGVT+ ER
Sbjct: 651 KKAAKAGLNQSLFERLVNLRLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTVRERVR 710
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEK+VT F ++GV P IGV
Sbjct: 711 RDVDFPWPVVDMPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPLDIGV 770
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKE+EVASVD+FQGREKD+I+LSCVRSN++QGIGF
Sbjct: 771 ITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGF 830
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VI+GNPKVLSK LW+ LL H+K+ +CLVEGPL NL+ S++Q
Sbjct: 831 LSDPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKDRKCLVEGPLTNLQTSLLQ 890
Query: 835 FQKPKKIYNDR 845
F KP+ Y +
Sbjct: 891 FGKPRTAYRQK 901
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 86/113 (76%), Gaps = 5/113 (4%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +P+ VV+C C KWFC++R N S SHIVNHLVRA+HKEV LH +S LG+
Sbjct: 94 HACAYCGIHSPSSVVKC--LGCNKWFCSARSNASSSHIVNHLVRARHKEVQLHPESTLGD 151
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPC-LNMMKESQSKDNVTIRW 254
T+LECYNCG +NVFLLGFI AK+++VVVLLCR+PC N + S D T RW
Sbjct: 152 TVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAANTSSKDMSWD--TSRW 202
>gi|408397555|gb|EKJ76696.1| hypothetical protein FPSE_03107 [Fusarium pseudograminearum CS3096]
Length = 1083
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/620 (64%), Positives = 488/620 (78%), Gaps = 11/620 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD GLN K + F K E +++L GDE+RLRY G+ P W+ V
Sbjct: 293 LKEAQSEDGLLVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYKGELRSP-WEGV 351
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + + VP D++H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 352 GYVIKIPNNQSDEVTLELRKTGNEKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDD 411
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV++Q+++ LP+++ APGLP+LN SQV A+K+VLQ+P+SLIQGPP
Sbjct: 412 MSVSGYIFHTLLGHEVQLQVMKTNLPKKWSAPGLPDLNPSQVGAIKAVLQKPLSLIQGPP 471
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E++ TGLKVVRL AKSRE V S
Sbjct: 472 GTGKTVTSATIIYHLAKMSGNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVES 531
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR + SEL KL QLK+E GELSS DEKKYK L + ER+I +ADV
Sbjct: 532 SVSFLALHEQVRM--SEHNSELVKLSQLKNELGELSSQDEKKYKQLTKIAERDILNNADV 589
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 590 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 649
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L PIRL +QYRMHP LSEFPSN FY+G+LQNGVT R
Sbjct: 650 KKAAKAGLNQSLFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLR 709
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV PM F+ +G EEISASGTSYLNRTEA+NVEK VT F ++GV P+ IGV
Sbjct: 710 KDVDFPWPVGEMPMMFWSNLGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADIGV 769
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV M +G +++ YKE+EVASVD+FQGREKD+I+LSCVRSN++QGIGF
Sbjct: 770 ITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGF 829
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK LW+ LL H+K+ +C VEGPL NL+ ++Q
Sbjct: 830 LSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQ 889
Query: 835 FQKPKKIY--NDRRLFFGAG 852
F +PK + +++ FGAG
Sbjct: 890 FSRPKVSFRQKNQQPQFGAG 909
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 108/173 (62%), Gaps = 19/173 (10%)
Query: 83 HNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTE 142
N R +D + + N+S N S V+G+ GL + G D E +
Sbjct: 44 QNGRRRADDDDNQTEVFEEDDNDSLN---SVPVDGLNGLKLK--GKDEE------KELPA 92
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +P CVV+C +C KWFC++RGN + +HIVNHLVRA+HKEV LH +S LG+
Sbjct: 93 HACAYCGIHSPGCVVKC--LTCNKWFCSARGNGTSTHIVNHLVRARHKEVQLHPESTLGD 150
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
T+LECYNCG +N FLLGFI AK+++VVVLLCR+PC + + N + WD
Sbjct: 151 TVLECYNCGTKNAFLLGFIPAKSDTVVVLLCRQPC------AANTSNKDMNWD 197
>gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense transcripts 1 homolog [Gibberella
zeae PH-1]
Length = 1083
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/620 (64%), Positives = 488/620 (78%), Gaps = 11/620 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD GLN K + F K E +++L GDE+RLRY G+ P W+ V
Sbjct: 293 LKEAQSEDGLLVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYKGELRSP-WEGV 351
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + + VP D++H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 352 GYVIKIPNNQSDEVTLELRKTGNEKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDD 411
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV++Q+++ LP+++ APGLP+LN SQV A+K+VLQ+P+SLIQGPP
Sbjct: 412 MSVSGYIFHTLLGHEVQLQVMKTNLPKKWSAPGLPDLNPSQVGAIKAVLQKPLSLIQGPP 471
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E++ TGLKVVRL AKSRE V S
Sbjct: 472 GTGKTVTSATIIYHLAKMSGNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVES 531
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR + SEL KL QLK+E GELSS DEKKYK L + ER+I +ADV
Sbjct: 532 SVSFLALHEQVRM--SEHNSELVKLSQLKNELGELSSQDEKKYKQLTKIAERDILNNADV 589
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 590 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 649
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L PIRL +QYRMHP LSEFPSN FY+G+LQNGVT R
Sbjct: 650 KKAAKAGLNQSLFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLR 709
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV PM F+ +G EEISASGTSYLNRTEA+NVEK VT F ++GV P+ IGV
Sbjct: 710 KDVDFPWPVGEMPMMFWSNLGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADIGV 769
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV M +G +++ YKE+EVASVD+FQGREKD+I+LSCVRSN++QGIGF
Sbjct: 770 ITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGF 829
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK LW+ LL H+K+ +C VEGPL NL+ ++Q
Sbjct: 830 LSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQ 889
Query: 835 FQKPKKIY--NDRRLFFGAG 852
F +PK + +++ FGAG
Sbjct: 890 FSRPKVSFRQKNQQPQFGAG 909
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 86/113 (76%), Gaps = 8/113 (7%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +P CVV+C +C KWFC++RGN + +HIVNHLVRA+HKEV LH +S LG+
Sbjct: 93 HACAYCGIHSPGCVVKC--LTCNKWFCSARGNGTSTHIVNHLVRARHKEVQLHPESTLGD 150
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
T+LECYNCG +N FLLGFI AK+++VVVLLCR+PC + + N + WD
Sbjct: 151 TVLECYNCGTKNAFLLGFIPAKSDTVVVLLCRQPC------AANTSNKDMNWD 197
>gi|322706853|gb|EFY98432.1| Regulator of nonsense transcripts 1 [Metarhizium anisopliae ARSEF
23]
Length = 1083
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/605 (65%), Positives = 482/605 (79%), Gaps = 9/605 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + +RWD GLN K + F K E +++L GDE+RLRY+G+ P W+ V
Sbjct: 294 LKEAQSEDGLIVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYNGELREP-WEGV 352
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ + +EV LELR + + VP D++H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 353 GYVIKIPNSQSDEVGLELRKTGNDKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDD 412
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV++Q V++ LPR++ PGLPELN SQ+ A+KSVLQ+P+SLIQGPP
Sbjct: 413 MSVSGYIFHTLLGHEVQLQPVQSRLPRKWSVPGLPELNQSQIDAIKSVLQKPLSLIQGPP 472
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E+I T LKVVRL AKSRE V S
Sbjct: 473 GTGKTVTSATIIYHLAKMSGNQVLVCAPSNVAVDQLCERIHNTNLKVVRLTAKSREDVES 532
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR + SEL KL QLK++ GELSS DEKK+K L +A EREI +ADV
Sbjct: 533 SVSFLALHEQVRL--SEHNSELVKLSQLKNDVGELSSQDEKKFKQLTKAAEREILNNADV 590
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 591 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 650
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERL+ L L PIRL QYRMHP LSEFPSN FY+G+LQNG+T +R
Sbjct: 651 KKAAKAGLNQSLFERLIKLQLAPIRLTTQYRMHPCLSEFPSNMFYDGSLQNGITHEQRLR 710
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
++FPWP+ PM F+ +G EEIS SGTSYLNRTEA+NVEK VT F ++GV PS+IGV
Sbjct: 711 RDVEFPWPIAETPMMFWSNLGNEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSEIGV 770
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV M +G+ +++ YKE+EVASVD+FQGREKD+I+LSCVRSNE+QGIGF
Sbjct: 771 ITPYEGQRSYIVTTMQNSGSFKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGF 830
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK LW+ LL H+K+ +C VEGPL NL+ ++Q
Sbjct: 831 LSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQ 890
Query: 835 FQKPK 839
F +PK
Sbjct: 891 FSRPK 895
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 101/142 (71%), Gaps = 16/142 (11%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
VEGM+GL + ++ E HAC YCG+ +PACVV+C +C KWFC+++GN
Sbjct: 74 VEGMSGLKLKAVDEEKE--------LPPHACAYCGIHSPACVVKC--LTCNKWFCSAKGN 123
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
+ +HIVNHLVRA+HKEV LH DS LG+T+LECYNCG +N FLLGFI AK+++VVVLLCR
Sbjct: 124 GTSTHIVNHLVRARHKEVQLHPDSTLGDTVLECYNCGTKNAFLLGFIPAKSDTVVVLLCR 183
Query: 235 EPCLNMMKESQSKDNVTIRWDI 256
+PC + + +KD + WDI
Sbjct: 184 QPCAS---STSTKD---MNWDI 199
>gi|198435823|ref|XP_002122130.1| PREDICTED: similar to regulator of nonsense transcripts 1 [Ciona
intestinalis]
Length = 1094
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/557 (70%), Positives = 462/557 (82%), Gaps = 9/557 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++ NVTIRWDIGLNKKR+A+F PK D +++L+ GDE+ LR+ G W+ G
Sbjct: 313 LKESQTQANVTIRWDIGLNKKRLAHFQLPKTDTDMKLMKGDEISLRHLG----TLWEGKG 368
Query: 301 HVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HV+K+ + +E+A+ELR+S GVP+D F VDFVWKSTSFDRMQ AMKTFAVDE SVS
Sbjct: 369 HVVKVPDNSSDEIAIELRSSVGVPLDKTGNFHVDFVWKSTSFDRMQSAMKTFAVDEASVS 428
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHE E Q ++ LP+RF APGLPELN SQV+AVK+VLQRP+ LIQGPPGTGK
Sbjct: 429 TYIYHRLLGHEAEEQTLKTNLPKRFSAPGLPELNHSQVYAVKTVLQRPLCLIQGPPGTGK 488
Query: 419 TVTSAAIVYHMAKQ-GQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
TVTSA IVYH+ K GQ QVLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ S V
Sbjct: 489 TVTSATIVYHLVKSCGQRQVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDSNVS 548
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
L+LH QVR +++ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ Q ADVIC
Sbjct: 549 FLSLHNQVRSMES--LPELQKLQQLKDETGELSSNDEKRYRALKRNAERELLQHADVICS 606
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCVGAGDPRL FRFR +LIDESTQATEPEC++P+VLGA+Q++LVGDHCQLGPV+MCKKA
Sbjct: 607 TCVGAGDPRLVRFRFRSILIDESTQATEPECMVPVVLGAQQLILVGDHCQLGPVVMCKKA 666
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
A AGLAQSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT ER +
Sbjct: 667 ANAGLAQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGERMRKNL 726
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
F WP P++PMFFY GQEEI++SGTSYLNRTEAA VE+I T FL+SG+ P QIG+ITP
Sbjct: 727 SFVWPSPDKPMFFYKTSGQEEIASSGTSYLNRTEAAVVERITTKFLKSGIKPEQIGIITP 786
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+Y+V YM +G+L +LY E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLND
Sbjct: 787 YEGQRSYLVQYMQYSGSLHSKLYMEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLND 846
Query: 778 PRRLNVALTRARYGIVI 794
PRRLNVALTRAR+ I
Sbjct: 847 PRRLNVALTRARWDSYI 863
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 120/169 (71%), Gaps = 18/169 (10%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
+G+A L FEE DD +GF Y + D EHACRYCG+ +P CVV CN S +KWFCN RGN
Sbjct: 89 TQGVADLRFEED-DDEDGF-YTR-DLPEHACRYCGIHDPNCVVMCN--STQKWFCNGRGN 143
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
TSGSHI+NHLVRAK KEV +H+D LG+++LECYNCGCRN+FLLGFI AK +SVVVLLCR
Sbjct: 144 TSGSHIINHLVRAKCKEVTVHRDGQLGDSMLECYNCGCRNIFLLGFIPAKADSVVVLLCR 203
Query: 235 EPCLNMMKESQSKDNVTIRWDIG----LNKKR--VAYFV-FPKEDNELR 276
+PC N ++ KD + WD L + R +++ V P E+ +LR
Sbjct: 204 QPCAN---QTSLKD---MNWDASQWQPLIQDRCFLSWLVKIPSEEEQLR 246
>gi|302422300|ref|XP_003008980.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
gi|261352126|gb|EEY14554.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
Length = 1041
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/611 (65%), Positives = 481/611 (78%), Gaps = 9/611 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + IRWD GLN K +A F K E +++L GDE+RLRY G+ PAW+ V
Sbjct: 265 LKEAQSEDGLQIRWDYGLNGKHLASFELHKIESGDVKLAVGDEMRLRYKGEL-RPAWEGV 323
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + + VP + H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 324 GYVIKIPNNHSDEVTLELRKAGNEKTVPTECTHNFSADYVWKATSYDRMQLAMKTFAVDD 383
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSG+I H LLG +V V ++ +P++F APGLP+LN SQ+ A+K+VLQ P+SLIQGPP
Sbjct: 384 NSVSGFIVHKLLGRDVAVAPMKTAMPKKFTAPGLPDLNQSQISAIKAVLQTPLSLIQGPP 443
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 444 GTGKTVTSATIIYHLAKSSGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 503
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR D++ EL KL QLK E GELSS DEKK+K L +A ER+I +ADV
Sbjct: 504 SVSFLALHEQVRMNDSN--GELVKLAQLKTELGELSSQDEKKFKQLTKAAERDILHNADV 561
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 562 VCCTCVGAGDPRLSKIKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 621
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L+PIRL QYRMHP LSEFPSN FY+G+LQNGVT +R
Sbjct: 622 KKAAKAGLNQSLFERLVNLRLQPIRLNTQYRMHPCLSEFPSNMFYDGSLQNGVTHAQRLR 681
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEK+VT F ++GV P IGV
Sbjct: 682 RDVDFPWPVADTPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPQDIGV 741
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKE+EVASVD+FQGREKD+I+LSCVRS+++QGIGF
Sbjct: 742 ITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSSDNQGIGF 801
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNV LTRA+YG+VILGNPKVLSK LW+ LL H+K+ +CLVEGPL NL+ S++Q
Sbjct: 802 LSDPRRLNVGLTRAKYGLVILGNPKVLSKHELWHHLLVHFKDRKCLVEGPLTNLQSSLLQ 861
Query: 835 FQKPKKIYNDR 845
F KPK Y +
Sbjct: 862 FGKPKTPYRQK 872
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 72/87 (82%), Gaps = 2/87 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +P+ VV+C C KWFC++RGNT+ SHIVNHLVRA+H+EV LH +S LG+
Sbjct: 95 HACSYCGIHSPSSVVKC--LGCNKWFCSARGNTTSSHIVNHLVRARHREVQLHPESTLGD 152
Query: 203 TILECYNCGCRNVFLLGFISAKTESVV 229
TILECYNCG +NVFLLGFI AK ++VV
Sbjct: 153 TILECYNCGSKNVFLLGFIPAKADTVV 179
>gi|401885778|gb|EJT49866.1| ATP dependent helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1013
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/613 (66%), Positives = 479/613 (78%), Gaps = 44/613 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRY----------SG 289
MKESQ + ++++RWD+GLN+KR A+F PK E E+RL GDELRL+ G
Sbjct: 252 MKESQGESDISVRWDMGLNQKRTAWFTMPKLESGEVRLAVGDELRLKLVGASMKGWANMG 311
Query: 290 DAAHPAWQSVGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM 347
+++ W+ VG VIK+ + + LE+R S VP D GF+VDFVWK+TSFDRMQ AM
Sbjct: 312 NSSDNLWEGVGSVIKVPDNVDDWIVLEMRRSDNVPTDCREGFAVDFVWKATSFDRMQQAM 371
Query: 348 KTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPI 407
KTFA+DE SVSGYI LLGHEV+ Q++R +P+RF APGLPELN SQ+ AVK+VLQ+P+
Sbjct: 372 KTFAIDEKSVSGYI---LLGHEVDPQVLRTQMPKRFTAPGLPELNHSQMAAVKAVLQKPL 428
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
SLIQGPPGTGKTVTSA+IVYH++K GQVLVCAPSNVAVD LAEKI TGLKVVRL AK
Sbjct: 429 SLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVCAPSNVAVDHLAEKIHMTGLKVVRLTAK 488
Query: 468 SREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
SREAV SPV +LTLH QV DT + EL KL QL++E GELS SDE+KYK+L RA E++
Sbjct: 489 SREAVDSPVSYLTLHEQVAKNDT--RRELQKLIQLRNELGELSQSDERKYKSLVRACEKD 546
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
I +ADVIC TCVGAGDPRLA F+FR VL+DE+TQA EPE +IPLV+G KQ VLVGDH Q
Sbjct: 547 ILNAADVICTTCVGAGDPRLAKFKFRTVLVDEATQAAEPEAMIPLVMGCKQAVLVGDHQQ 606
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPVIM KKAARAGL+QSLFERLV+LG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGV
Sbjct: 607 LGPVIMNKKAARAGLSQSLFERLVILGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGV 666
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T ER +DFPWPV + PM F+ G EEIS+SGTS++NRTEAANVEK+VT F +SGV
Sbjct: 667 TAPERLRKNVDFPWPVADTPMMFHQNTGTEEISSSGTSFVNRTEAANVEKMVTKFFKSGV 726
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
+PSQIGVITPYEGQR++IV+YM +GAL++ LYKE+EVASVD+FQGREKDYIILSCVRSN
Sbjct: 727 LPSQIGVITPYEGQRSFIVSYMQLHGALKKDLYKEVEVASVDAFQGREKDYIILSCVRSN 786
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
EHQGIGFLNDPRRLNVALTRA+YG+VILGNPKVLS
Sbjct: 787 EHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLS------------------------- 821
Query: 828 LKQSMVQFQKPKK 840
K SM+QF KP+K
Sbjct: 822 -KPSMMQFSKPRK 833
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 89/125 (71%), Gaps = 13/125 (10%)
Query: 159 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 218
C+ S KWFCNSRGNTS SHIV+HLV+AKHKEV LHKDSPLG+TILECYNC +NVF+L
Sbjct: 81 CSPQSVVKWFCNSRGNTSASHIVSHLVKAKHKEVVLHKDSPLGDTILECYNCTNKNVFML 140
Query: 219 GFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD------IGLNKKRVAYFV-FPKE 271
GFI+AK E+VVV+LCR PC + + S+D I WD I ++ +++ V P E
Sbjct: 141 GFIAAKNEAVVVILCRHPCAST---TTSRD---INWDPSEWSAIIHDRSFLSWLVKVPSE 194
Query: 272 DNELR 276
+LR
Sbjct: 195 AEQLR 199
>gi|400597184|gb|EJP64919.1| Regulator of nonsense transcripts 1 [Beauveria bassiana ARSEF 2860]
Length = 1083
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/605 (64%), Positives = 481/605 (79%), Gaps = 9/605 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+DN+T+ W GLN K +A F K E E++L GDE+ LRY+G+ P WQ V
Sbjct: 292 LKEAQSEDNLTVEWSQGLNNKHLATFNLRKIESGEVKLAVGDEMLLRYNGELREP-WQGV 350
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+V+K+ + +EV LELR + + VP D++H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 351 GYVMKIPNSQSDEVCLELRKNGNDRSVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDD 410
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSG+I+H LLGH+V++Q +++ LP+++ APGLP+LN SQV A++SVLQ+P+SLIQGPP
Sbjct: 411 MSVSGFIFHTLLGHDVQLQPMKSNLPKKWSAPGLPDLNQSQVDAIRSVLQKPLSLIQGPP 470
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH++K QVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 471 GTGKTVTSATIIYHLSKISGNQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 530
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR + SE KL QLK+E GELSS DEKK++ L +A EREI +ADV
Sbjct: 531 SVSFLALHEQVRM--SEHNSEFAKLSQLKNEAGELSSQDEKKFRQLTKAAEREILNNADV 588
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPL+LG KQVVLVGDH QLGPVIM
Sbjct: 589 VCCTCVGAGDPRLSKLKFRSVLIDESTQSAEPECIIPLMLGCKQVVLVGDHKQLGPVIMN 648
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL+QSLFERL+ L L+PI L QYRMHP LSEFPSN FY+G+LQNGVT +R
Sbjct: 649 KKAAKAGLSQSLFERLMQLRLQPILLNTQYRMHPCLSEFPSNMFYDGSLQNGVTQEQRIR 708
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV PM F+ +G EEIS SGTSYLNRTEA+NVEKIVT F ++GV PS+IGV
Sbjct: 709 KDVDFPWPVAEMPMMFWSNIGNEEISTSGTSYLNRTEASNVEKIVTRFFKAGVKPSEIGV 768
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV M G +++ YK +EVASVD+FQGREKD+I+LSCVRSNE+QGIGF
Sbjct: 769 ITPYEGQRSYIVTTMQNAGTSKKEYYKSVEVASVDAFQGREKDFIVLSCVRSNENQGIGF 828
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNP+VLSK LW LLTH+++ C VEGPL N +Q ++Q
Sbjct: 829 LSDPRRLNVALTRAKYGVVILGNPRVLSKHELWYNLLTHFRDRRCFVEGPLTNFQQCLLQ 888
Query: 835 FQKPK 839
F KP+
Sbjct: 889 FSKPR 893
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 101/149 (67%), Gaps = 17/149 (11%)
Query: 108 NTSTSQI-VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRK 166
N S + I V+ M GL+ + T ++ E +AC YCG+ PA VV+C V C K
Sbjct: 64 NDSLASIPVDEMVGLNLKNTDEEKE--------LPAYACAYCGIHAPASVVKCLV--CNK 113
Query: 167 WFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTE 226
WFC++RGN++ SHI+NHLVRA+HKEV LH +S LG+TILECY+CG +N FLLGFI AK++
Sbjct: 114 WFCSARGNSTSSHIINHLVRARHKEVQLHPESALGDTILECYSCGTKNSFLLGFIPAKSD 173
Query: 227 SVVVLLCREPCLNMMKESQSKDNVTIRWD 255
SVVVLLCR+PC + S N + WD
Sbjct: 174 SVVVLLCRQPC------AASASNKDMNWD 196
>gi|449303317|gb|EMC99325.1| hypothetical protein BAUCODRAFT_399389 [Baudoinia compniacensis
UAMH 10762]
Length = 1096
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/609 (64%), Positives = 476/609 (78%), Gaps = 28/609 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDA-AHPAWQS 298
+KE+QS+DN+ +RWD GLN K +A FV PK E +++L GDE+R+RY G+ AH W+
Sbjct: 297 LKEAQSQDNLIVRWDFGLNNKHLASFVLPKLELGDVKLAVGDEMRIRYIGELRAH--WEG 354
Query: 299 VGHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVD 353
VG+VIK+ +EV +ELR+ + VP + H F+ D+VWK+TSFDRMQ AMKTFA+D
Sbjct: 355 VGYVIKIPNNVSDEVTIELRSRGDHKSVPTECTHNFTADYVWKATSFDRMQHAMKTFAID 414
Query: 354 ETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGP 413
E SVSGYI+H LLGHEV ++ +PR+F P LP+LN SQ+ AVKSVL +P+SLIQGP
Sbjct: 415 EMSVSGYIFHRLLGHEVAAAPMKVNMPRKFSVPNLPDLNGSQINAVKSVLTKPLSLIQGP 474
Query: 414 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS 473
PGTGKTVTSA ++YH++K GQVLVCAPSNVAVDQL E+I TGLK VR+ AKSRE V
Sbjct: 475 PGTGKTVTSATVIYHLSKINGGQVLVCAPSNVAVDQLCERIHKTGLKCVRVTAKSREDVD 534
Query: 474 SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
SPV L+LH QV+ DT+ EL+KLQQLK E GELSS DEKK+K L RA EREI +AD
Sbjct: 535 SPVSFLSLHRQVQMNDTN--VELNKLQQLKAELGELSSQDEKKFKTLTRAAEREILSNAD 592
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM 593
VICCTCVGAGDPRLA F+FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 593 VICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIM 652
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
+LG PIRLQVQYRMHP LSEFPSN FYEG+LQNG+T+ ER
Sbjct: 653 N-----------------ILGCAPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGITMQERL 695
Query: 654 SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEKIVT F ++GV P IG
Sbjct: 696 LRNVDFPWPVADAPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVKPESIG 755
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
+ITPYEGQR+Y+V M + G R+++YKE+EVASVD+FQGREKD+I+LSCVRSN+HQGIG
Sbjct: 756 IITPYEGQRSYVVQSMQQTGTFRKEIYKEVEVASVDAFQGREKDFIVLSCVRSNDHQGIG 815
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
FL+DPRRLNVALTRA+YG+VILGNPKVL+K PLW+ LL H+KE CLVEGPL+NL+ S++
Sbjct: 816 FLSDPRRLNVALTRAKYGLVILGNPKVLAKHPLWHYLLLHFKERNCLVEGPLSNLQTSLL 875
Query: 834 QFQKPKKIY 842
QF KPK Y
Sbjct: 876 QFGKPKMSY 884
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/113 (65%), Positives = 87/113 (76%), Gaps = 8/113 (7%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ NP VV+C +C KWFC++RGNTS SHIVNHLVRA+HKEV LH SPLG+
Sbjct: 97 HACAYCGIHNPGSVVKC--LTCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPSSPLGD 154
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
T LECYNCG +NVFLLGFI AK+++VVVLLCR+PC M SKD + WD
Sbjct: 155 TTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAM---PSSKD---MNWD 201
>gi|358395794|gb|EHK45181.1| hypothetical protein TRIATDRAFT_243374 [Trichoderma atroviride IMI
206040]
Length = 1083
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/611 (64%), Positives = 483/611 (79%), Gaps = 9/611 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D +T+RWD LN K +A F K E +++L GDE+RLRY+G+ P W+ V
Sbjct: 293 LKEAQSEDGLTVRWDYALNNKHIASFNLQKIESGDVKLAVGDEMRLRYTGELREP-WEGV 351
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ + +EV LELR + + VP+D++H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 352 GYVIKIPNSQSDEVCLELRKTGNDKLVPIDLSHNFSADYVWKATSYDRMQLAMKTFAVDD 411
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGH + ++ TLP+++ APGLP+LN QV A+K+VLQRP+SLIQGPP
Sbjct: 412 MSVSGYIFHILLGHICQPPPMKVTLPKKWSAPGLPDLNQGQVDAIKAVLQRPLSLIQGPP 471
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 472 GTGKTVTSATIIYHLAKTSGSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 531
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR + +EL KL QLK+E GELSS DEKK + L +A EREI +ADV
Sbjct: 532 SVTFLALHEQVRM--SEHNTELVKLSQLKNEVGELSSQDEKKLRQLTKAAEREILSNADV 589
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 590 ICCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 649
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL +SLFERL+ L + PI L+ QYRMHP LSEFPSN FY+GTLQNG+T +R
Sbjct: 650 KKAAKAGLNRSLFERLINLKINPIPLKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVR 709
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV PM F+ +G EEIS SGTSYLNRTEA+NVEK VT F ++GV PS+IGV
Sbjct: 710 KDVDFPWPVTEMPMMFWSNIGHEEISTSGTSYLNRTEASNVEKTVTRFFKAGVRPSEIGV 769
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M +G ++++YK++EVASVD+FQGREKD+I+LSCVRSN++QGIGF
Sbjct: 770 ITPYEGQRSYIVSTMQNSGTYKKEMYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGF 829
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK LW+ LL H+K+ +C VEGPL NL+ ++Q
Sbjct: 830 LSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLAHFKDRKCFVEGPLTNLQACLLQ 889
Query: 835 FQKPKKIYNDR 845
F +P+ Y R
Sbjct: 890 FSRPRVSYRQR 900
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 100/135 (74%), Gaps = 8/135 (5%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +PACVV+C +C KWFC++RG+ S +HIVNHLVRA+HKEV LH +S LG+
Sbjct: 93 HACAYCGIHSPACVVKC--LTCNKWFCSARGSGSSTHIVNHLVRARHKEVQLHPESTLGD 150
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDN--VTIRWDIGLNK 260
T+LECYNCG +N F+LGFI AK+++VVVLLCR+PC ++ S +KD T RW+ + +
Sbjct: 151 TVLECYNCGTKNAFILGFIPAKSDAVVVLLCRQPCASV---SSNKDMNWDTSRWEPLIEE 207
Query: 261 KR-VAYFVFPKEDNE 274
+ + + V P D E
Sbjct: 208 RAFLPWLVNPPSDAE 222
>gi|346326262|gb|EGX95858.1| nonsense transcript regulator [Cordyceps militaris CM01]
Length = 1084
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/605 (64%), Positives = 480/605 (79%), Gaps = 9/605 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+DN+T+ W +GLN K +A F K E E++L GDE+ LRY+G+ P WQ V
Sbjct: 292 LKEAQSEDNLTVEWSLGLNNKHLATFNLRKIESGEVKLAVGDEMLLRYNGELREP-WQGV 350
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+V+K+ + +EV LELR + + P D++H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 351 GYVMKIPNSQSDEVCLELRKTGNDRSNPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDD 410
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSG+I+H LLGH+V +Q +++ LP+++ APGLP+LN SQV A++SVLQ+P+SLIQGPP
Sbjct: 411 MSVSGFIFHTLLGHDVHLQPMKSNLPKKWSAPGLPDLNQSQVDAIRSVLQKPLSLIQGPP 470
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH++K QVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 471 GTGKTVTSATIIYHLSKMSGNQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 530
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR + SE KL QLK E GEL S DEKK++ L +A EREI +ADV
Sbjct: 531 SVSFLALHEQVRM--SEHNSEFAKLSQLKIEAGELISQDEKKFRQLTKAAEREILTNADV 588
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPL+LG KQVVLVGDH QLGPVIM
Sbjct: 589 VCCTCVGAGDPRLSKIKFRSVLIDESTQSAEPECIIPLMLGCKQVVLVGDHKQLGPVIMN 648
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL+QSLFERL+ L L+PI L QYRMHP LSEFPSN FY+G+LQNGVT +R
Sbjct: 649 KKAAKAGLSQSLFERLMQLRLQPILLNTQYRMHPCLSEFPSNMFYDGSLQNGVTQEQRIR 708
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV PM F+ +G EEIS SGTSYLNRTEA+NVEKIVT F ++GV P++IGV
Sbjct: 709 KDVDFPWPVAEMPMMFWSNIGNEEISTSGTSYLNRTEASNVEKIVTRFFKAGVKPAEIGV 768
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV M +G ++ LYK +EVASVD+FQGREKD+I+LSCVRSNE+QGIGF
Sbjct: 769 ITPYEGQRSYIVTTMQNSGTSKKDLYKGVEVASVDAFQGREKDFIVLSCVRSNENQGIGF 828
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNP+VLSK LW LLTH+++ C VEGPLNN +Q ++Q
Sbjct: 829 LSDPRRLNVALTRAKYGLVILGNPRVLSKHELWYNLLTHFRDRRCFVEGPLNNFQQCLLQ 888
Query: 835 FQKPK 839
F KP+
Sbjct: 889 FSKPR 893
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 97/141 (68%), Gaps = 16/141 (11%)
Query: 115 VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN 174
V+ M GL+ + T ++ E +AC YCG+ PA VV+C + C KWFC++RGN
Sbjct: 72 VDEMVGLNLKNTEEEKE--------LPAYACAYCGIHAPASVVKCLI--CNKWFCSARGN 121
Query: 175 TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
++ SHI+NHLVRA+HKEV LH +S LG+TILECY+CG +N FLLGFI AK++SVVVLLCR
Sbjct: 122 STSSHIINHLVRARHKEVQLHPESALGDTILECYSCGTKNSFLLGFIPAKSDSVVVLLCR 181
Query: 235 EPCLNMMKESQSKDNVTIRWD 255
+PC + S N + WD
Sbjct: 182 QPC------AASASNKDMNWD 196
>gi|301092662|ref|XP_002997185.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262111572|gb|EEY69624.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 687
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/745 (58%), Positives = 523/745 (70%), Gaps = 90/745 (12%)
Query: 296 WQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDET 355
W+ GHV++L + EVALE+R+S VP++I G+ VDFVWKSTSFDRMQ AMKTFAVD+T
Sbjct: 7 WEGTGHVLRL-EESEVALEMRSSN-VPIEITDGYLVDFVWKSTSFDRMQAAMKTFAVDDT 64
Query: 356 SVSGYIYHHLLGHEVEVQMVRNTLPR----RFGAPGLPELNASQVFAVKSVLQRPISLIQ 411
S++GY+YH +LGH+V VQ +R +PR F APGLPELN Q+ AVK VL++P+SLIQ
Sbjct: 65 SLTGYLYHKILGHDVGVQALR--IPRSVGTHFSAPGLPELNTFQMEAVKGVLEQPLSLIQ 122
Query: 412 GPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA 471
GPPGTGKTVTSA+IV+HM+KQ GQVLV APSN+AVD L KISATGL+VVRL AKSREA
Sbjct: 123 GPPGTGKTVTSASIVFHMSKQNMGQVLVTAPSNIAVDHLTMKISATGLRVVRLAAKSREA 182
Query: 472 VSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQS 531
V+S VEHL+LH ++ LD+ +K++L KL QLKD+ GELSS DEK++K+LKR EREI Q+
Sbjct: 183 VASSVEHLSLHAMIKSLDSPDKADLRKLMQLKDDIGELSSQDEKRFKSLKRQAEREILQA 242
Query: 532 ADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
ADVIC TCVGAGDPRL+NFRFRQVLIDE+TQATEPECLIP+V GAK VV+VGDH QLGPV
Sbjct: 243 ADVICTTCVGAGDPRLSNFRFRQVLIDEATQATEPECLIPIVQGAKHVVMVGDHRQLGPV 302
Query: 592 IMCKKAARAGLAQSLFERLVLLGLK--PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 649
+M KKAA+AGL SLF+RLV K P RL+VQYRMHP LSEFPSN FYEG LQNGV
Sbjct: 303 VMNKKAAKAGLNNSLFDRLVKSDTKHRPFRLRVQYRMHPFLSEFPSNEFYEGDLQNGVAA 362
Query: 650 NERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP 709
+ERQ S +DFPWP PN+P FFY+ +G EEIS+SGTSYLNRTEA+NVEKIVTTFL++GV+P
Sbjct: 363 SERQLSSVDFPWPNPNKPTFFYICLGAEEISSSGTSYLNRTEASNVEKIVTTFLKAGVLP 422
Query: 710 SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEH 769
SQIGVITPYEGQRAY+V+YM RNG LR QLYK++EVASVDSFQGREKD IILSCVRSNE+
Sbjct: 423 SQIGVITPYEGQRAYVVSYMQRNGPLRSQLYKDVEVASVDSFQGREKDLIILSCVRSNEN 482
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
QGIGFL+D RRLNVALTRA+YG+++LGNP+VL+KQ LWN LL HY++++ ++EGPLNNL
Sbjct: 483 QGIGFLSDERRLNVALTRAKYGVILLGNPRVLAKQTLWNKLLNHYRDNQLIMEGPLNNLT 542
Query: 830 QSMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKP 889
S +QF P + +++R A R G+ P P + P
Sbjct: 543 PSHMQF--PVQRHSER--------------------GARREGNGFNRRGPAPPLDSRFDP 580
Query: 890 GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAG 949
G +PL P G P P RG GP V PGS G
Sbjct: 581 RYEQTG----GLPLDPLAAG--GLPPPAPQRGPRRGPSSYV-----PGSMG--------- 620
Query: 950 APIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVG--GPLTQPGFVNNMPVQGPSQ 1007
P ++ +Q S+G GP TQ Q SQ
Sbjct: 621 --------------------------PLTQDGMTQSSMGMDGPFTQMA-----QTQSFSQ 649
Query: 1008 TFRDGFSVGSMSQDFLG--DDFKSQ 1030
D F +MSQD G DFKSQ
Sbjct: 650 LSSDKF---AMSQDSFGYEHDFKSQ 671
>gi|145350386|ref|XP_001419588.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579820|gb|ABO97881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 797
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/594 (65%), Positives = 479/594 (80%), Gaps = 3/594 (0%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY--SGDAAHPAWQSV 299
+ESQ+KD+VT+RWDIGLNK+R+AYF F ++N + + GD L+LR +WQ
Sbjct: 205 RESQTKDDVTVRWDIGLNKRRIAYFSFGADENAVSVTLGDSLQLRLLIQTKNEQRSWQGQ 264
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
G VIK TAQEEV +E+ PV+ +G+SVDF+WK TS++R Q A+++FA DETSVSG
Sbjct: 265 GVVIKFTAQEEVGVEMYGMDA-PVEYTNGYSVDFLWKGTSYERAQQALESFAEDETSVSG 323
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
YIY L+G + E + P++ APGLPELN SQ AVK+VLQRP+SL+QGPPGTGKT
Sbjct: 324 YIYLKLMGKDPEDMFLSGDFPKKLTAPGLPELNQSQHDAVKTVLQRPLSLVQGPPGTGKT 383
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 479
VTSA +VYH+AK+G GQV+VCAPSNVAVD LAEKI TGLKVVR+ ++SRE + S VEHL
Sbjct: 384 VTSATLVYHLAKRGNGQVIVCAPSNVAVDHLAEKIEKTGLKVVRISSRSREHLVSSVEHL 443
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
TLHYQV ++ S KLQQLK+E GELS+ DEKKY+ ++ EREI ++ADVIC T
Sbjct: 444 TLHYQVANIGGSTHKAFQKLQQLKNELGELSAGDEKKYRNAQKKLEREILENADVICTTA 503
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGDPRLANFRFR VLIDESTQATEPECLIP+V+GAKQVV+VGDH QLGPV+ CK+A
Sbjct: 504 VGAGDPRLANFRFRMVLIDESTQATEPECLIPIVMGAKQVVMVGDHKQLGPVVTCKQAYA 563
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
AGLAQSLFERL+ LG++PIRLQ+QYRMHP LSEFPSN+FY+GTLQNGV+ ER S IDF
Sbjct: 564 AGLAQSLFERLIALGIQPIRLQIQYRMHPCLSEFPSNTFYDGTLQNGVSAIERTLSHIDF 623
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
PWPVP++PM F+ Q GQEE+SASGTS+LNR EA+ VEK VT L +GV P QIGV+TPYE
Sbjct: 624 PWPVPSKPMMFWSQTGQEEMSASGTSFLNRAEASAVEKCVTHLLNAGVSPEQIGVVTPYE 683
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQRAY+V +M+R G L QLYK+I+VASVDSFQG+EKD+II++CVRSNE GIGFL+DPR
Sbjct: 684 GQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEKDFIIMTCVRSNEKSGIGFLSDPR 743
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
RLNVA+TRAR G++++GNPKVL+KQ L++ +LTH++E+ CLVEG L +LK+ MV
Sbjct: 744 RLNVAITRARSGLIVIGNPKVLNKQHLFHEMLTHFRENGCLVEGTLGSLKECMV 797
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 141 TEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN-TSGSHIVNHLVRAKHKEVCLHKDSP 199
+E AC YCG+SN +CV +C +KWFCN R N S ++ HLVR+++KEV LH+ SP
Sbjct: 1 SEFACAYCGISNVSCVAQC--VKTKKWFCNGRSNGLPASCLIYHLVRSRNKEVRLHESSP 58
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
LG+ LECY G NVF LGF+ K E+VVVL+ RE
Sbjct: 59 LGDMTLECYVTGATNVFNLGFVPCKDENVVVLVTRE 94
>gi|193614406|ref|XP_001947281.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1118
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/603 (63%), Positives = 474/603 (78%), Gaps = 7/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KES++++N+T+RWD+GLNKK VA+F K D ++RL+ DELRLR +G+ W+ +G
Sbjct: 314 LKESRTQENITVRWDVGLNKKFVAFFHLVKTDGDMRLMYDDELRLRLTGENP---WEGIG 370
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ E + LE+++++GVP +I + VD++WKSTSFDRMQ ++ FA DE+SVS
Sbjct: 371 HVIKIPDNYGEGIGLEMKSNKGVPTEITSNYKVDYIWKSTSFDRMQCSLNRFATDESSVS 430
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHE + + R+ +P+ F AP LP+LN SQV AVK +QRP+SLIQGPPGTGK
Sbjct: 431 TYIYHKLLGHEFDDLIFRSHMPKHFSAPNLPDLNRSQVKAVKHAVQRPLSLIQGPPGTGK 490
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + G VLVCAPSN+AVDQL EKI TGLKVVRLC+KSRE++ SPV
Sbjct: 491 TVTSATIVYQLVTINGGPVLVCAPSNIAVDQLTEKIHRTGLKVVRLCSKSRESIDSPVSF 550
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH QV+ L ++ L KLQQLK+E GELS DEK+Y LK+ E+E+ ++ADVIC T
Sbjct: 551 LALHNQVQKLPSN--GVLQKLQQLKNETGELSMDDEKRYSVLKKVAEQELLEAADVICTT 608
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL F+F +LIDES QATEPEC++P+V G +Q++LVGDHCQLGPV+ CKKAA
Sbjct: 609 CVGAGDPRLMQFKFHSILIDESVQATEPECMVPVVHGVQQLILVGDHCQLGPVVTCKKAA 668
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
AGL QSLFERLV+LG++P RL+VQYRMHP LS F SN FYEG+LQNGV ++R+ I+
Sbjct: 669 NAGLTQSLFERLVVLGIRPFRLEVQYRMHPELSRFSSNFFYEGSLQNGVCADDRKLRKIE 728
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
FPWPV + PM FY +G EEI+ SGTSYLNRTEAANVE I T FLR GV P QIG+ITPY
Sbjct: 729 FPWPVADEPMLFYATLGHEEIAGSGTSYLNRTEAANVEHIATRFLRCGVRPDQIGIITPY 788
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRAY+V YM L +LY++IE+ASVD+FQGREKD+II+SCVRSNE+QGIGFLNDP
Sbjct: 789 EGQRAYLVQYMQYQAPLPAKLYQKIEIASVDAFQGREKDFIIMSCVRSNENQGIGFLNDP 848
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRA+YG++I+GNPKVLSK+ LWN LL +YK LVEGPLNNLK S +Q KP
Sbjct: 849 RRLNVALTRAKYGLLIVGNPKVLSKKQLWNHLLNYYKAKNVLVEGPLNNLKPSPIQLPKP 908
Query: 839 KKI 841
K++
Sbjct: 909 KQL 911
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 99/133 (74%), Gaps = 6/133 (4%)
Query: 105 NSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSC 164
+ ++T + + + + L F++ +D + + +AC+YCG+ +P CVV CN+ C
Sbjct: 81 DKNDTHVTTVTKTIGELRFKDEEED----SFFTQELPYYACKYCGIHDPGCVVMCNI--C 134
Query: 165 RKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK 224
+KWFCN RGNTSGSHI+NHLVRA HKEV HKD PLGET+LECY+CG +NVF+LGF++AK
Sbjct: 135 KKWFCNGRGNTSGSHIINHLVRANHKEVTFHKDGPLGETVLECYSCGVKNVFVLGFVTAK 194
Query: 225 TESVVVLLCREPC 237
+SV+VLLCR+PC
Sbjct: 195 GDSVLVLLCRQPC 207
>gi|449491958|ref|XP_004175605.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Taeniopygia guttata]
Length = 886
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/605 (64%), Positives = 470/605 (77%), Gaps = 53/605 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL GDE+ LRY GD A P W+ +G
Sbjct: 319 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLKEGDEICLRYKGDLA-PLWKGIG 377
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 378 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 437
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 438 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 497
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 498 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 557
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 558 LALHNQIRNMDS--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 615
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHC
Sbjct: 616 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCH----------- 664
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
G+A LF L+L + +R G D
Sbjct: 665 --GVA-DLFCSLLL----------------------------------CSSADRVKKGFD 687
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPY
Sbjct: 688 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPY 747
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQR+Y+V YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDP
Sbjct: 748 EGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDP 807
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP
Sbjct: 808 RRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKP 867
Query: 839 KKIYN 843
+K+ N
Sbjct: 868 RKLVN 872
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + + TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 84 QNGAVDENVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 136
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 137 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 194
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 195 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 224
>gi|324500307|gb|ADY40148.1| Regulator of nonsense transcripts 1 [Ascaris suum]
Length = 1087
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/644 (60%), Positives = 490/644 (76%), Gaps = 14/644 (2%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
KESQ++ +RWDIGLNKK AYF+ PK + ++L+ GDELRL++ W VG
Sbjct: 284 KESQTQSVGHVRWDIGLNKKPQAYFMLPKFSEGSMKLMLGDELRLKHQ-QTVDGEWSCVG 342
Query: 301 HVIKL--TAQEEVALELRA-SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
VIK+ +E+ +E+R+ ++ +P D F+ +FVW STSFDRM A++ DE+ V
Sbjct: 343 SVIKIPDNHNDEIGIEMRSKAENMPTDTRTNFTCEFVWNSTSFDRMHAALRLLGQDESCV 402
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
S +IYH LLGHEV+ + + LP+RF APGLPELN SQV AVK VLQRP+SLIQGPPGTG
Sbjct: 403 SQFIYHKLLGHEVDDIVFKVQLPKRFSAPGLPELNHSQVQAVKMVLQRPLSLIQGPPGTG 462
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+ +Q GQVLVCAPSN+AVDQLAEKI TGLKVVRLCAKSRE + SPV
Sbjct: 463 KTVTSATIVYHLVRQTSGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSRETLDSPVA 522
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
L LH Q++ + + +ELHKLQQLK+E GEL+ +DE++++ L+ A E+++ +ADVICC
Sbjct: 523 FLALHNQLKAVQGA--AELHKLQQLKEEIGELADADERRFRTLRMAKEKQLLGAADVICC 580
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCV A D RL++ R + VLIDESTQATEPE ++ +V G KQ+VLVGDHCQLGPVIMCKKA
Sbjct: 581 TCVSAADNRLSHMRIKCVLIDESTQATEPEVMVAVVRGVKQLVLVGDHCQLGPVIMCKKA 640
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
A+AGL+QSLFERLV+LG +PIRLQVQYRMHP+LS FPSN FYEGTLQNGVT ERQ +G+
Sbjct: 641 AKAGLSQSLFERLVVLGTRPIRLQVQYRMHPALSAFPSNVFYEGTLQNGVTQGERQLAGV 700
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
D+ WPVP++PM F+ GQEE+S SGTSYLNRTEAANVEK+ T FL++G+ P QIG+ITP
Sbjct: 701 DWQWPVPDKPMMFWSCYGQEELSPSGTSYLNRTEAANVEKVATRFLKAGLRPEQIGIITP 760
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIV +M GAL +LY E+EVA+VD+FQGREKD II++CVRSNEHQGIGFLND
Sbjct: 761 YEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNEHQGIGFLND 820
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
RRLNVALTRA+YG++I+GN K+LS+ PLWN LLT +KE CLVEGPLNNLK S + K
Sbjct: 821 SRRLNVALTRAKYGVIIIGNAKILSRHPLWNQLLTMFKEKNCLVEGPLNNLKPSPITLSK 880
Query: 838 PKKIYNDR-------RLFFGAGPGIVPNDISTSNPNADRRGSRA 874
P+ + + R + A ++P + N N R RA
Sbjct: 881 PRGVNSSIGMNRFIPRATWSAKEAMIPGSVYDRNRNGIRNDVRA 924
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 92/135 (68%), Gaps = 3/135 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HACRYCG+ +P+ V C +C KWFCN RGNT+GSHIVNHLVR++HKEV LHKD LGE
Sbjct: 84 HACRYCGIHDPSAVAMC--LTCEKWFCNGRGNTAGSHIVNHLVRSQHKEVGLHKDGILGE 141
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKR 262
T LECY C RN+F+LGFI AK ++VVV+LCR PC N + V + +++
Sbjct: 142 TQLECYQCASRNIFMLGFIPAKADTVVVVLCRTPCANQATLKDANWQVDEWKPLISDRQL 201
Query: 263 VAYFV-FPKEDNELR 276
+++ V P E +LR
Sbjct: 202 LSWLVKIPSEQEQLR 216
>gi|406695570|gb|EKC98873.1| hypothetical protein A1Q2_06844 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1000
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/611 (66%), Positives = 472/611 (77%), Gaps = 53/611 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRY----------SG 289
MKESQ + ++++RWD+GLN+KR A+F PK E E+RL GDELRL+ G
Sbjct: 252 MKESQGESDISVRWDMGLNQKRTAWFTMPKLESGEVRLAVGDELRLKLVGASMKGWANMG 311
Query: 290 DAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKT 349
+++ W+ VG VIK+ VP D GF+VDFVWK+TSFDRMQ AMKT
Sbjct: 312 NSSDNLWEGVGSVIKV-----------PDNNVPTDCREGFAVDFVWKATSFDRMQQAMKT 360
Query: 350 FAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISL 409
FA+DE SVSGYI LLGHEV+ Q++R +P+RF APGLPELN SQ+ AVK+VLQ+P+SL
Sbjct: 361 FAIDEKSVSGYI---LLGHEVDPQVLRTQMPKRFTAPGLPELNHSQMAAVKAVLQKPLSL 417
Query: 410 IQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR 469
IQGPPGTGKTVTSA+IVYH++K GQVLVCAPSNVAVD LAEKI TGLKVVRL AKSR
Sbjct: 418 IQGPPGTGKTVTSASIVYHLSKMNPGQVLVCAPSNVAVDHLAEKIHMTGLKVVRLTAKSR 477
Query: 470 EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREIS 529
EAV SPV +LTLH QV DT + EL KL QL++E GELS SDE+KYK+L RA E++I
Sbjct: 478 EAVDSPVSYLTLHEQVAKNDT--RRELQKLIQLRNELGELSQSDERKYKSLVRACEKDIL 535
Query: 530 QSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLG 589
+ADVIC TCVGAGDPRLA F+FR VL+DE+TQA EPE +IPLV+G KQ VLVGDH QLG
Sbjct: 536 NAADVICTTCVGAGDPRLAKFKFRTVLVDEATQAAEPEAMIPLVMGCKQAVLVGDHQQLG 595
Query: 590 PVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 649
PVIM KKAARAGL+QSLFERLV+LG +PIRLQVQYRMHP LSEFPSN FYEGTLQNGVT
Sbjct: 596 PVIMNKKAARAGLSQSLFERLVILGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTA 655
Query: 650 NERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP 709
ER +DFPWPV + PM F+ G EEIS+SGTS++NRTEAANVEK+VT F +SGV+P
Sbjct: 656 PERLRKNVDFPWPVADTPMMFHQNTGTEEISSSGTSFVNRTEAANVEKMVTKFFKSGVLP 715
Query: 710 SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEH 769
SQIGVITPYEGQR++IV+YM +GAL++ LYKE+EVASVD+FQGREKDYIILSCVRSNEH
Sbjct: 716 SQIGVITPYEGQRSFIVSYMQLHGALKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEH 775
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
QGIGFLNDPRRLNVALTRA+YG+VILGNPKVLS K
Sbjct: 776 QGIGFLNDPRRLNVALTRAKYGVVILGNPKVLS--------------------------K 809
Query: 830 QSMVQFQKPKK 840
SM+QF KP+K
Sbjct: 810 PSMMQFSKPRK 820
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 89/125 (71%), Gaps = 13/125 (10%)
Query: 159 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 218
C+ S KWFCNSRGNTS SHIV+HLV+AKHKEV LHKDSPLG+TILECYNC +NVF+L
Sbjct: 81 CSPQSVVKWFCNSRGNTSASHIVSHLVKAKHKEVVLHKDSPLGDTILECYNCTNKNVFML 140
Query: 219 GFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD------IGLNKKRVAYFV-FPKE 271
GFI+AK E+VVV+LCR PC + + S+D I WD I ++ +++ V P E
Sbjct: 141 GFIAAKNEAVVVILCRHPCAST---TTSRD---INWDPSEWSAIIHDRSFLSWLVKVPSE 194
Query: 272 DNELR 276
+LR
Sbjct: 195 AEQLR 199
>gi|358388726|gb|EHK26319.1| hypothetical protein TRIVIDRAFT_218486 [Trichoderma virens Gv29-8]
Length = 1083
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/611 (63%), Positives = 481/611 (78%), Gaps = 9/611 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D +T+RWD LN K +A F K E +++L GDE+RLRY+G+ W+ V
Sbjct: 293 LKEAQSEDGLTVRWDYALNNKHIASFNLQKIESGDVKLAVGDEMRLRYTGEL-REEWEGV 351
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ + +EV LELR + + VP+D++H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 352 GYVIKIPNSQSDEVCLELRKTGNDKLVPIDLSHNFSADYVWKATSYDRMQLAMKTFAVDD 411
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGH + ++ TLP+++ APGLP+LN QV A+++VLQ+P+SLIQGPP
Sbjct: 412 MSVSGYIFHILLGHICQPPPMKVTLPKKWSAPGLPDLNQGQVDAIRAVLQKPLSLIQGPP 471
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK QVLVCAPSNVAVDQL E++ TGLKVVRL AKSRE V S
Sbjct: 472 GTGKTVTSATIIYHLAKMSGSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVES 531
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR + SEL KL QLK E GELSS DEKK + L +A EREI +ADV
Sbjct: 532 SVSFLALHEQVRM--SEHNSELVKLSQLKVEVGELSSQDEKKLRQLTKAAEREILSNADV 589
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 590 ICCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 649
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL +SLFERL+ L + PI L+ QYRMHP LSEFPSN FY+GTLQNG+T +R
Sbjct: 650 KKAAKAGLNRSLFERLINLKINPIPLKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVR 709
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV PM F+ +G EEIS SGTSYLNRTEA+NVEK VT F ++GV PS+IGV
Sbjct: 710 KDVDFPWPVTEMPMMFWSNIGHEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSEIGV 769
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M +G +++LYK++EVASVD+FQGREKD+I+LSCVRSN++QGIGF
Sbjct: 770 ITPYEGQRSYIVSTMQNSGTYKKELYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGF 829
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNPKVLSK LW+ LL H+K+ +C VEGPL NL+ ++Q
Sbjct: 830 LSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLAHFKDRKCFVEGPLTNLQACLLQ 889
Query: 835 FQKPKKIYNDR 845
F +P+ Y +
Sbjct: 890 FSRPRVSYRQK 900
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 87/113 (76%), Gaps = 8/113 (7%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +PACVV+C +C KWFC++RG+ S +HIVNHLVRA+HKEV LH +S LG+
Sbjct: 93 HACAYCGIHSPACVVKC--LTCNKWFCSARGSGSSTHIVNHLVRARHKEVQLHPESTLGD 150
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
T+LECY+CG +N F+LGFI AK+++VVVLLCR+PC + + N + WD
Sbjct: 151 TVLECYSCGTKNAFILGFIPAKSDAVVVLLCRQPC------AAANSNKDMNWD 197
>gi|195165354|ref|XP_002023504.1| GL20400 [Drosophila persimilis]
gi|194105609|gb|EDW27652.1| GL20400 [Drosophila persimilis]
Length = 879
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/575 (66%), Positives = 461/575 (80%), Gaps = 10/575 (1%)
Query: 275 LRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDINHGFSVD 332
++L+ GDELRLRY G+ P W +GHVIK+ +++ LEL++S PV + FSVD
Sbjct: 1 MKLMHGDELRLRYVGEMYSP-WNEIGHVIKVPDNFGDDIGLELKSSTNAPVKCSSNFSVD 59
Query: 333 FVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH----EVEVQMVRNTLPRRFGAPGL 388
F+WK TSFDRM A++TFA+D SVS +IY LLGH + + R P+ F AP L
Sbjct: 60 FIWKCTSFDRMTRALRTFAMDRQSVSNFIYSRLLGHGRPDANDDVLFRGAQPKLFSAPNL 119
Query: 389 PELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
P+LN SQV+AVK LQRP+SLIQGPPGTGKTVTSA IVY + KQ G VLVCAPSN AVD
Sbjct: 120 PDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVD 179
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGE 508
QL EKI T LKVVR+CAKSREA+ SPV L LH Q+R ++T+ +EL KLQQLKDE GE
Sbjct: 180 QLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRSMETN--TELKKLQQLKDETGE 237
Query: 509 LSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
LSS+DEK+Y+ LKR TE ++ ++ADVICCTCVGAGD RL+ +F +LIDES Q+TEPEC
Sbjct: 238 LSSADEKRYRNLKRGTENQLLEAADVICCTCVGAGDGRLSRIKFTSILIDESMQSTEPEC 297
Query: 569 LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHP 628
++P+VLGAKQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++P RL+VQYRMHP
Sbjct: 298 MVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 357
Query: 629 SLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 688
LS+FPSN FYEG+LQNGV +R+ +DFPWP P RPMFF V GQEEI+ SGTS+LN
Sbjct: 358 ELSQFPSNFFYEGSLQNGVCAEDRRLK-LDFPWPQPERPMFFLVTQGQEEIAGSGTSFLN 416
Query: 689 RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 748
RTEAANVEKI T FL++GV P QIG+ITPYEGQRAY+V YM G+L +LY+EIE+ASV
Sbjct: 417 RTEAANVEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASV 476
Query: 749 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
D+FQGREKD II+SCVRSNE QGIGFLNDPRRLNVALTRA+YGI+I+GNPKVL+KQ LWN
Sbjct: 477 DAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWN 536
Query: 809 GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYN 843
LL YK+ + LVEG LNNLK+S++ FQKPKK+ N
Sbjct: 537 HLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKLVN 571
>gi|346970142|gb|EGY13594.1| ATP-dependent helicase NAM7 [Verticillium dahliae VdLs.17]
Length = 1099
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/593 (65%), Positives = 469/593 (79%), Gaps = 9/593 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + IRWD GLN K +A F K E +++L GDE+RLRY G+ PAW+ V
Sbjct: 295 LKEAQSEDGLQIRWDYGLNGKHLASFELHKIESGDVKLAVGDEMRLRYKGEL-RPAWEGV 353
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + + VP + H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 354 GYVIKIPNNHSDEVTLELRKAGNEKTVPTECTHNFSADYVWKATSYDRMQLAMKTFAVDD 413
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSG+I H LLG +V V ++ +P++F APGLP+LN SQ+ A+K+VLQ P+SLIQGPP
Sbjct: 414 NSVSGFIVHKLLGRDVAVAPMKTAMPKKFTAPGLPDLNQSQISAIKAVLQTPLSLIQGPP 473
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+AK GQVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 474 GTGKTVTSATIIYHLAKSSGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 533
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L LH QVR D++ EL KL QLK E GELSS DEKK+K L +A ER+I +ADV
Sbjct: 534 SVSFLALHEQVRMNDSN--GELVKLAQLKTELGELSSQDEKKFKQLTKAAERDILHNADV 591
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 592 VCCTCVGAGDPRLSKIKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 651
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L+PIRL QYRMHP LSEFPSN FY+G+LQNGVT +R
Sbjct: 652 KKAAKAGLNQSLFERLVNLRLQPIRLNTQYRMHPCLSEFPSNMFYDGSLQNGVTHAQRLR 711
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEK+VT F ++GV P IGV
Sbjct: 712 RDVDFPWPVADTPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPQDIGV 771
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+YIV+ M G +++ YKE+EVASVD+FQGREKD+I+LSCVRS+++QGIGF
Sbjct: 772 ITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSSDNQGIGF 831
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
L+DPRRLNV LTRA+YG+VILGNPKVLSK LW+ LL H+K+ +CLVEGPL N
Sbjct: 832 LSDPRRLNVGLTRAKYGLVILGNPKVLSKHELWHHLLVHFKDRKCLVEGPLTN 884
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 88/114 (77%), Gaps = 8/114 (7%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +P+ VV+C C KWFC++RGNT+ SHIVNHLVRA+H+EV LH +S LG+
Sbjct: 95 HACSYCGIHSPSSVVKC--LGCNKWFCSARGNTTSSHIVNHLVRARHREVQLHPESTLGD 152
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
TILECYNCG +NVFLLGFI AK ++VVVLLCR+PC + SKD + WDI
Sbjct: 153 TILECYNCGSKNVFLLGFIPAKADTVVVLLCRQPC---AASTSSKD---MSWDI 200
>gi|308807923|ref|XP_003081272.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
gi|116059734|emb|CAL55441.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
Length = 963
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/601 (64%), Positives = 477/601 (79%), Gaps = 5/601 (0%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAH--PAWQSV 299
+E+Q+KDN+TIRWD+GL+K+++AYF F ++ ++ + GD L+LR + WQ
Sbjct: 280 RENQTKDNITIRWDVGLSKRKIAYFCFGADEEKVSVALGDSLQLRLLMQTPNGPQLWQGQ 339
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
G VIK TAQEEV +E+ PV+ + G+SVDF+WK TS++R Q A+K+FAVDETS SG
Sbjct: 340 GVVIKFTAQEEVGVEMYGMDA-PVESSTGYSVDFLWKGTSYERAQQALKSFAVDETSCSG 398
Query: 360 YIYHHLLGHEVEVQMVRNTLPR--RFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
YIYH LLGHEVE Q + +P+ + APGLPELN SQ AVK VL+RP+SL+QGPPGTG
Sbjct: 399 YIYHKLLGHEVEDQKLHVDVPKGTKLTAPGLPELNDSQFNAVKEVLERPLSLVQGPPGTG 458
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+AK+G GQV+VCAPSNVAVD LAEKI TGLKVVR+ ++SRE + S VE
Sbjct: 459 KTVTSATIVYHLAKRGNGQVIVCAPSNVAVDHLAEKIEKTGLKVVRISSRSREHLVSSVE 518
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
HLTLHYQV ++ + KLQ LK+E GELS DEKKYK ++ ER+I ++ADVIC
Sbjct: 519 HLTLHYQVANIGGATHKAFQKLQALKNECGELSPGDEKKYKNAQKKLERDILENADVICT 578
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
T VGAGDPRLA+FRFR VLIDESTQATEPECLIP+V+GAK VV+VGDH QLGPV+ CK+A
Sbjct: 579 TAVGAGDPRLADFRFRMVLIDESTQATEPECLIPIVMGAKHVVMVGDHRQLGPVVTCKQA 638
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
AGLAQSLFERL+ LG+KPIRL VQYRMHP LS+FPSN FYEG L NGV+ ++R S +
Sbjct: 639 HAAGLAQSLFERLIALGIKPIRLGVQYRMHPCLSDFPSNKFYEGVLSNGVSASDRTLSHV 698
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
DFPWPVP++PM F+ Q GQEE+SASGTS+LNR EA VEK VT L SGV P IGV+TP
Sbjct: 699 DFPWPVPSKPMMFWSQTGQEEMSASGTSFLNRAEAVAVEKCVTHLLNSGVSPEDIGVVTP 758
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQRAY+V +M+R G L QLYK+I+VASVDSFQG+EKD+II++CVRSNE GIGFL+D
Sbjct: 759 YEGQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEKDFIIMTCVRSNEKSGIGFLSD 818
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVA+TRAR G++I+GNPKVL+KQ L++ +LTH+++ +CLVEG L +LKQ MV +
Sbjct: 819 PRRLNVAITRARSGLIIIGNPKVLNKQLLFHDMLTHFRQKKCLVEGALGSLKQCMVALPE 878
Query: 838 P 838
P
Sbjct: 879 P 879
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 141 TEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGN-TSGSHIVNHLVRAKHKEVCLHKDSP 199
+EHAC YCG+SN +CV +C KWFCN R N S ++ HLVR+++KEV LH+ SP
Sbjct: 76 SEHACAYCGISNASCVAQC--VKTNKWFCNGRSNGLPASCLIYHLVRSRNKEVRLHESSP 133
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
LG+ +LECY G NVF LGFI K E+VVVL R+
Sbjct: 134 LGDMLLECYVTGATNVFNLGFIPCKDENVVVLATRD 169
>gi|393911179|gb|EFO25239.2| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1059
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/604 (63%), Positives = 479/604 (79%), Gaps = 7/604 (1%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
KESQ++ +RWD+GLN+K A+F PK + ++L+ GDELRL++S A W S+G
Sbjct: 283 KESQTQSVGHVRWDVGLNRKPQAFFQLPKFSEGSMKLMLGDELRLKHS-QTAGGEWSSIG 341
Query: 301 HVIKL--TAQEEVALELR-ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
VIK+ +EV +E+R ++ VP D F+ +FVW STSFDRMQ A+ DE V
Sbjct: 342 CVIKIPDNHNDEVGIEMRLKAENVPTDTRTNFTCEFVWNSTSFDRMQAALSLLGQDEDCV 401
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
S +IYH L+GH+++ + + +LP+RF PGLPELN SQV AVK+VLQRP+SLIQGPPGTG
Sbjct: 402 SQFIYHKLMGHDIDDIIFKVSLPKRFSVPGLPELNHSQVHAVKTVLQRPLSLIQGPPGTG 461
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+ KQ GQVLVCAPSN+AVDQLAEKI TGLKVVRLCAKSRE + SPV
Sbjct: 462 KTVTSATIVYHLVKQTNGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSRETLDSPVA 521
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
L LH Q++ L + +ELHKLQQLK+E GEL+ +DE++++AL+ A E ++ +ADVICC
Sbjct: 522 FLALHNQLKALHGA--AELHKLQQLKEEIGELADADERRFRALRIAKECQLLAAADVICC 579
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCV A D RL++ R + VLIDESTQATEPE ++ +V G +Q+VLVGDHCQLGPVIMCKKA
Sbjct: 580 TCVSAADSRLSHMRIKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKA 639
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
A+AGL+QSLFERLVLLG +PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT ERQ GI
Sbjct: 640 AKAGLSQSLFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGERQLIGI 699
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
D+ WPVP++PM F+ GQEE+S+SGTS+LNRTEAANVEK+ T FL++G+ P QIG+ITP
Sbjct: 700 DWQWPVPDKPMMFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQIGIITP 759
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIV +M GAL +LY E+EVA+VD+FQGREKD II++CVRSN+HQGIGFLND
Sbjct: 760 YEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLND 819
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
RRLNVALTRA++G++I+GN KVLS+ PLWN LL+ +KE CLVEGPLNNLK S + K
Sbjct: 820 SRRLNVALTRAKFGLIIVGNAKVLSRHPLWNYLLSVFKEKGCLVEGPLNNLKPSPITLSK 879
Query: 838 PKKI 841
P+++
Sbjct: 880 PRRV 883
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 77/97 (79%), Gaps = 2/97 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HACRYCG+ +PA V C + C+KWFCN RG+TS HIV HLVR++HKEV LHK+ LGE
Sbjct: 83 HACRYCGIHDPATVAMCII--CQKWFCNGRGSTSAGHIVIHLVRSQHKEVSLHKEGALGE 140
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLN 239
T+LECY CG +N+F+LG+I AK ++VVV+LCR PC N
Sbjct: 141 TVLECYQCGSKNIFMLGYIPAKADTVVVVLCRSPCAN 177
>gi|213408485|ref|XP_002175013.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
gi|212003060|gb|EEB08720.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
Length = 926
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/606 (63%), Positives = 472/606 (77%), Gaps = 9/606 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++++V +RWD LN++ A+F PK E E+RL DE++LRY G+ P W S
Sbjct: 243 LKESQTQNDVVVRWDQSLNQRYTAWFYLPKLESGEIRLAVSDEMKLRYEGEL-RPKWSST 301
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
G+VIK+ +EV LEL S +P++ H FSVD+VWKSTSFDRMQ A+K+FA D + +
Sbjct: 302 GYVIKIPNNISDEVGLELNRSDKIPIECTHNFSVDYVWKSTSFDRMQAALKSFATDNSRL 361
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
SGY+YH LLGHEV ++ LP F P LPELN+SQV AV+SVL +P+SLIQGPPGTG
Sbjct: 362 SGYLYHKLLGHEVPPLTLKTKLPTTFSVPNLPELNSSQVNAVRSVLTQPLSLIQGPPGTG 421
Query: 418 KTVTSAAIVYHMAKQGQGQ---VLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
KTVTSA+IVYH+A Q +G VLVCAPSNVAVDQLAEKI TGL+VVR+ AKSRE + S
Sbjct: 422 KTVTSASIVYHLATQTKGNGSAVLVCAPSNVAVDQLAEKIHQTGLRVVRVTAKSREDIDS 481
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
PV L+LH QV++ + +E E +L +L+++ GELS +DEK+ + L + ERE+ QSA+V
Sbjct: 482 PVSFLSLHEQVKNYEGNE--EFSRLLKLQNDVGELSLADEKRLRVLVASIERELLQSANV 539
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGD R++ RFR VLIDE+TQA+EPEC+IPL KQVVLVGDH QLGPV+M
Sbjct: 540 ICCTCVGAGDKRVSKLRFRAVLIDEATQASEPECMIPLTHVYKQVVLVGDHQQLGPVVMN 599
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL+QSLFERL++LG PIRL VQYRMHP LSEFPSN FYEGTLQNGVT ER +
Sbjct: 600 KKAAQAGLSQSLFERLIILGNSPIRLTVQYRMHPCLSEFPSNMFYEGTLQNGVTTAERLA 659
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWP P P+ FY GQEEISASGTSYLNRTEA+ EKIVT F ++GV P QIG+
Sbjct: 660 RYLDFPWPQPEEPLMFYANFGQEEISASGTSYLNRTEASTCEKIVTQFFKAGVTPEQIGI 719
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPY+GQR+YIV YM NGAL++ LYK +EVASVD+FQGREKD+IILSCVRS+EHQGIGF
Sbjct: 720 ITPYDGQRSYIVQYMQNNGALKKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGF 779
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L++PRRLNVALTRARYG+++LGNPKVL+K LW + H +E LVEGPLNNL++ M+
Sbjct: 780 LSEPRRLNVALTRARYGVIVLGNPKVLAKHALWYHFIVHCRERGYLVEGPLNNLQKFMLG 839
Query: 835 FQKPKK 840
P K
Sbjct: 840 LAPPIK 845
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 99/142 (69%), Gaps = 14/142 (9%)
Query: 139 DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDS 198
D +C YCG+SNP+ +V+C C KWFCNSRG+TS SHIV HLVRA+HK+V LHK+S
Sbjct: 40 DQEHESCAYCGLSNPSAIVKC--LHCNKWFCNSRGHTSASHIVTHLVRARHKQVSLHKNS 97
Query: 199 PLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIG- 257
PLGET+LECYNCG RNVFLLG I AK+++V+VLLCR+PC K S +KD + WD+
Sbjct: 98 PLGETVLECYNCGTRNVFLLGLIPAKSDTVIVLLCRQPC---TKVSLAKD---MNWDVSQ 151
Query: 258 -----LNKKRVAYFVFPKEDNE 274
+++ + + V P E
Sbjct: 152 WQPLITDRQFLPWLVLPATKEE 173
>gi|452824582|gb|EME31584.1| dynamin GTPase [Galdieria sulphuraria]
Length = 1012
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/622 (62%), Positives = 482/622 (77%), Gaps = 27/622 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPA--WQ 297
+K QS+ +++RWD+GLNKK +A+F+ P+ + +L+++ GDELRL+ HPA W+
Sbjct: 290 IKAEQSRPGISVRWDVGLNKKLIAFFIMPQVAEGDLKILVGDELRLK------HPASNWE 343
Query: 298 SVGHVIKLTAQEEVALELR---ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
GHV TA EE+ALELR AS P D + FSV+ +WKST+FDRMQ A++ FAVDE
Sbjct: 344 CTGHVKGFTANEEIALELRSGKASSSAPRDCHKDFSVEVIWKSTTFDRMQKALQAFAVDE 403
Query: 355 TSVSGYIYHHLLGHEVEVQMVR-NTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGP 413
TSVSGYIYH +LGHEV Q + P APGLPELN SQ AVK+ L+ P+SL+QGP
Sbjct: 404 TSVSGYIYHRILGHEVNRQTIHLFKHPNNLNAPGLPELNPSQKAAVKAALESPLSLVQGP 463
Query: 414 PGTGKTVTSAAIVYHMA------------KQGQGQVLVCAPSNVAVDQLAEKISATGLKV 461
PGTGKTVTSA IVYH+A ++ Q+LVCAPSN+AVDQLAEKIS TGL V
Sbjct: 464 PGTGKTVTSATIVYHLANNVKNITQRQKTRKCSRQILVCAPSNIAVDQLAEKISCTGLNV 523
Query: 462 VRLCAKSREAVSSPVEHLTLHYQVRHLDTSE--KSELHKLQQLKDEQGELSSSDEKKYKA 519
VRLCAKSREAVSS V+HLTLH ++R+ ++ +EL KL QL +E GEL+ D+K+ +
Sbjct: 524 VRLCAKSREAVSSSVDHLTLHQKLRNRSSNNPNATELVKLIQLHEELGELNERDDKRLRT 583
Query: 520 LKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV 579
LKR EREI +S DVICCTC AGD R+A+FRFR VLIDE+TQATEPE L+PL+ G KQV
Sbjct: 584 LKRNFEREILESMDVICCTCTTAGDRRIAHFRFRAVLIDEATQATEPESLLPLIHGCKQV 643
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFY 639
V VGDHCQLGPV+ K AA+AG QSLFERLV LG++P+RL +QYRMHPSL+EFPSN FY
Sbjct: 644 VFVGDHCQLGPVVTSKTAAKAGFGQSLFERLVALGIRPLRLTIQYRMHPSLTEFPSNMFY 703
Query: 640 EGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIV 699
EG+LQNG+T ER+ S + FPWPV +P FFYVQ G EE+SASGTS+LNR EA VEKIV
Sbjct: 704 EGSLQNGITAAERKPSSVSFPWPVAAKPFFFYVQTGPEEVSASGTSFLNRVEADAVEKIV 763
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
+ FL++GV P +IGVITPYEGQRA+IV + R+G +R +LYKEIEVASVD+FQGREKD+I
Sbjct: 764 SHFLKNGVDPQRIGVITPYEGQRAFIVQHFLRSGTMRLELYKEIEVASVDAFQGREKDFI 823
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHEC 819
ILSCVRSNEHQGIGFL+DPRRLNVALTRAR+G++ILGNPKVL+K+ LW LL H KE++
Sbjct: 824 ILSCVRSNEHQGIGFLSDPRRLNVALTRARFGLIILGNPKVLAKKWLWACLLQHCKENDV 883
Query: 820 LVEGPLNNLKQSMVQFQKPKKI 841
LVEG L+ LK S+VQF +P+K+
Sbjct: 884 LVEGSLSRLKTSLVQFPRPRKL 905
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 83/106 (78%), Gaps = 6/106 (5%)
Query: 138 ADFTEHACRYCGVSNPACVVRCNVPSCR--KWFCNSRGNTSGSHIVNHLVRAKHKEVCLH 195
A +AC YCG+ +PAC+V+ R KWFCN+R T GSHI+ HLVR +HKEVCLH
Sbjct: 86 AQLPRYACSYCGIHDPACMVK----DVRDGKWFCNARLGTPGSHIIMHLVRTRHKEVCLH 141
Query: 196 KDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMM 241
+++PLGET+LECYNCG RNVFLLGF+ A+ +SVVVLLCREPCL+ +
Sbjct: 142 EENPLGETVLECYNCGTRNVFLLGFVPAQGDSVVVLLCREPCLHSL 187
>gi|402594446|gb|EJW88372.1| hypothetical protein WUBG_00717 [Wuchereria bancrofti]
Length = 1089
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/606 (63%), Positives = 478/606 (78%), Gaps = 11/606 (1%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
KESQ++ +RWDIGLN+K A+F PK + ++L+ GDELRL++S A W SVG
Sbjct: 283 KESQTQSVGHVRWDIGLNRKPQAFFQLPKFSEGSMKLMLGDELRLKHSQTAG-GEWSSVG 341
Query: 301 HVIKL--TAQEEVALELR-ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
VIK+ +EV +E+R ++ VP D F+ +FVW STSF+RMQ A+ DE V
Sbjct: 342 CVIKIPDNHNDEVGIEMRLKAENVPTDTRTNFTCEFVWNSTSFERMQAALSLLGQDEDCV 401
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
S +IYH L+GH+++ + + +LP+RF PGLPELN SQV AVK+VLQRP+SLIQGPPGTG
Sbjct: 402 SQFIYHKLMGHDIDDIIFKVSLPKRFSVPGLPELNHSQVHAVKTVLQRPLSLIQGPPGTG 461
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+ KQ GQVLVCAPSN+AVDQLAEKI TGLKVVRLCAKSRE + SPV
Sbjct: 462 KTVTSATIVYHLVKQTNGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSRETLDSPVA 521
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
L LH Q+R L + +ELHKLQQLK+E GEL+ +DE++++AL+ A E ++ +ADVICC
Sbjct: 522 FLALHNQLRALHGA--AELHKLQQLKEEMGELADADERRFRALRIAKECQLLAAADVICC 579
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCV A D RL++ R + VLIDESTQATEPE ++ +V G +Q+VLVGDHCQLGPVIMCKKA
Sbjct: 580 TCVSAADSRLSHMRIKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKA 639
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
A+AGL+QSLFERLVLLG +PIRLQVQYRMHP+LS FPSN FYEG+LQNG ERQ GI
Sbjct: 640 AKAGLSQSLFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNG----ERQLIGI 695
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
D+ WPVP++PM F+ GQEE+S+SGTS+LNRTEAANVEK+ T FL++G+ P QIG+ITP
Sbjct: 696 DWQWPVPDKPMMFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQIGIITP 755
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR+YIV +M GAL +LY E+EVA+VD+FQGREKD II++CVRSN+HQGIGFLND
Sbjct: 756 YEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLND 815
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
RRLNVALTRA++G++I+GN KVLS+ PLWN LL+ +KE CLVEGPLNNLK S + K
Sbjct: 816 SRRLNVALTRAKFGLIIVGNAKVLSRHPLWNYLLSMFKEKGCLVEGPLNNLKPSPITLSK 875
Query: 838 PKKIYN 843
P++I N
Sbjct: 876 PRRIPN 881
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 76/97 (78%), Gaps = 2/97 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HACRYCG+ +PA V C V C KWFCN RG+TS HIV HLVR++HKEV LHK+ LGE
Sbjct: 83 HACRYCGIHDPATVAMCMV--CEKWFCNGRGSTSAGHIVIHLVRSQHKEVSLHKEGALGE 140
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLN 239
T+LECY CG +N+F+LG+I AK ++VVV+LCR PC N
Sbjct: 141 TVLECYQCGSKNIFMLGYIPAKADTVVVVLCRSPCAN 177
>gi|323454972|gb|EGB10841.1| hypothetical protein AURANDRAFT_22049 [Aureococcus anophagefferens]
Length = 1026
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/616 (63%), Positives = 486/616 (78%), Gaps = 18/616 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-------EDNELRLVPGDELRLRYSGDAAH 293
++E+Q++++V++RWD GL+K+ +A F + E NELRL GDEL++R + A
Sbjct: 248 VREAQAREDVSVRWDRGLSKRHIAIFSLARGNSYASYESNELRLAVGDELKIRLNSGGAR 307
Query: 294 ---PAWQSVGHVIKLTAQEEVALELRASQGVPVDINH-GFSVDFVWKSTSFDRMQGAMKT 349
W++ GHV++L A E+ALELR S P ++ GF VDFVWK TS+DRMQ A+K
Sbjct: 308 QHGKPWEASGHVLRL-ADGEIALELRTSN-APTEVTECGFVVDFVWKGTSYDRMQNALKN 365
Query: 350 FAVDETSVSGYIYHHLLGHEVEVQMVRN----TLPRRFGAPGLPELNASQVFAVKSVLQR 405
AVD+TS+SGY+YH LLGH+VE Q+++ + RR G PGLP+LN SQ AV+SV+ +
Sbjct: 366 LAVDDTSLSGYLYHRLLGHDVEPQVLKGGAAASSSRRAGVPGLPDLNHSQAAAVRSVVTQ 425
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLC 465
P+SLIQGPPGTGKTVTSAAIV+H+AKQG GQVLV APSN+AVDQL EKI ATGLKVVRLC
Sbjct: 426 PLSLIQGPPGTGKTVTSAAIVWHLAKQGMGQVLVTAPSNIAVDQLTEKIHATGLKVVRLC 485
Query: 466 AKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATE 525
AKSREA+S+ V+HLTLH +R +DT E +EL KL +LK++QGEL+ +DEK+++ L+ TE
Sbjct: 486 AKSREAISTSVDHLTLHTMLRDIDTPEIAELRKLMRLKEDQGELAPADEKQFRKLRANTE 545
Query: 526 REISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDH 585
R + ++ADVIC TC AGDPRL RFRQVLIDE+TQATEPE LIP+VLGAKQ+VLVGDH
Sbjct: 546 RVLLKAADVICTTCACAGDPRLGGSRFRQVLIDEATQATEPESLIPIVLGAKQLVLVGDH 605
Query: 586 CQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQN 645
QLGPVIMCK AA+AGL QSL+ERLV LG++PIRLQVQYR HP LSEFPS FYEGTLQN
Sbjct: 606 QQLGPVIMCKGAAKAGLTQSLYERLVALGIRPIRLQVQYRSHPCLSEFPSAMFYEGTLQN 665
Query: 646 GVTINERQSSGI-DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR 704
GV+ ER G FPWP P PM FYV G EE+SASGTS+LNR+EAA++E++VT +L+
Sbjct: 666 GVSEGERDLEGEPRFPWPNPEAPMMFYVCAGAEEMSASGTSFLNRSEAASIERLVTHYLK 725
Query: 705 SGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCV 764
G+ P QIGVITPYEGQRAY+V++M+ GALR +Y+ +EVASVDSFQGREKD IILSCV
Sbjct: 726 LGLDPDQIGVITPYEGQRAYVVHHMASAGALRADVYERVEVASVDSFQGREKDVIILSCV 785
Query: 765 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGP 824
RSNEHQGIGFLNDPRRLNVALTRA+YG+VILG +VL++ LW+ LLTH+K+ C+ EGP
Sbjct: 786 RSNEHQGIGFLNDPRRLNVALTRAKYGLVILGAARVLAQDALWHELLTHFKKLGCVAEGP 845
Query: 825 LNNLKQSMVQFQKPKK 840
L NLK S + KP++
Sbjct: 846 LGNLKVSSLALPKPRR 861
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 71/84 (84%), Gaps = 2/84 (2%)
Query: 144 ACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGET 203
AC+YCG+ +P+ VVRC KWFCNS G TSGSHIV HLVRAKH +VCLHKDSPLGET
Sbjct: 48 ACKYCGIRDPSAVVRC--VESDKWFCNSTGGTSGSHIVQHLVRAKHNQVCLHKDSPLGET 105
Query: 204 ILECYNCGCRNVFLLGFISAKTES 227
+LECYNCGCRNVFL+GF+ AKTES
Sbjct: 106 VLECYNCGCRNVFLIGFVPAKTES 129
>gi|170593003|ref|XP_001901254.1| Regulator of nonsense transcripts 1 homolog [Brugia malayi]
gi|158591321|gb|EDP29934.1| Regulator of nonsense transcripts 1 homolog, putative [Brugia
malayi]
Length = 1112
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/716 (57%), Positives = 514/716 (71%), Gaps = 39/716 (5%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
KESQ++ +RWDIGLN+K A+F PK + ++L+ GDELRL++S A W SVG
Sbjct: 283 KESQTQSVGHVRWDIGLNRKPQAFFQLPKFSEGSMKLMLGDELRLKHSQTAG-GEWSSVG 341
Query: 301 HVIKL--TAQEEVALELR-ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
VIK+ +EV +E+R ++ VP D F+ +FVW STSF+RMQ A+ DE V
Sbjct: 342 CVIKIPDNHNDEVGIEMRLKAENVPTDTRTNFTCEFVWNSTSFERMQAALSLLGQDEDCV 401
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
S +IYH L+GH+++ + + +LP+RF PGLPELN SQV AVK+VLQRP+SLIQGPPGTG
Sbjct: 402 SQFIYHKLMGHDIDDIIFKVSLPKRFSVPGLPELNHSQVHAVKTVLQRPLSLIQGPPGTG 461
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+ KQ GQVLVCAPSN+AVDQLAEKI TGLKVVRLCAKSRE + SPV
Sbjct: 462 KTVTSATIVYHLVKQTNGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSRETLDSPVA 521
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
L LH Q+R L + +ELHKLQQLK+E GEL+ +DE++++AL+ A E ++ +ADVICC
Sbjct: 522 FLALHNQLRALHGA--AELHKLQQLKEEMGELADADERRFRALRIAKECQLLTAADVICC 579
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCV A D RL++ R + VLIDESTQATEPE ++ +V G +Q+VLVGDHCQLGPVIMCKKA
Sbjct: 580 TCVSAADSRLSHMRIKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKA 639
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVT--------- 648
A+AGL+QSLFERLVLLG +PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT
Sbjct: 640 AKAGLSQSLFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGKHLSMKR 699
Query: 649 ---IN---------ERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVE 696
IN ERQ GID+ WPVP++PM F+ GQEE+S+SGTS+LNRTEAANVE
Sbjct: 700 KEVINLSHMCFISGERQLIGIDWQWPVPDKPMMFWSCYGQEELSSSGTSFLNRTEAANVE 759
Query: 697 KIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREK 756
K+ T FL++G+ P QIG+ITPYEGQR+YIV +M GAL +LY E+EVA+VD+FQGREK
Sbjct: 760 KLATRFLKAGLKPEQIGIITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREK 819
Query: 757 DYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
D II++CVRSN+HQGIGFLND RRLNVALTRA++G++I+GN KVLS+ PLWN LL+ +KE
Sbjct: 820 DIIIVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVLSRHPLWNYLLSMFKE 879
Query: 817 HECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARG 876
CLVEGPLNNLK S + KP++I N + G+V + + G+R R
Sbjct: 880 KGCLVEGPLNNLKPSPITLSKPRRIPNIMSMNRFIPRGVV----LAKDMQGNAFGTRNRD 935
Query: 877 YMPPGPPNGTHKPG-LHPA-GFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAV 930
P G L P G +P VP+ F PP Y + +R HG + +V
Sbjct: 936 LRSIQDPFAAITHGQLRPQNGINIP-VPIQMFV-QPPPHYYPLHTR---HGDLNSV 986
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 76/97 (78%), Gaps = 2/97 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HACRYCG+ +PA V C V C KWFCN RG+TS HIV HLVR++HKEV LHK+ LGE
Sbjct: 83 HACRYCGIHDPATVAMCMV--CEKWFCNGRGSTSAGHIVIHLVRSQHKEVSLHKEGALGE 140
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLN 239
T+LECY CG +N+F+LG+I AK ++VVV+LCR PC N
Sbjct: 141 TVLECYQCGSKNIFMLGYIPAKADTVVVVLCRSPCAN 177
>gi|312071929|ref|XP_003138834.1| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1141
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/633 (60%), Positives = 479/633 (75%), Gaps = 36/633 (5%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
KESQ++ +RWD+GLN+K A+F PK + ++L+ GDELRL++S A W S+G
Sbjct: 306 KESQTQSVGHVRWDVGLNRKPQAFFQLPKFSEGSMKLMLGDELRLKHS-QTAGGEWSSIG 364
Query: 301 HVIKL--TAQEEVALELR-ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
VIK+ +EV +E+R ++ VP D F+ +FVW STSFDRMQ A+ DE V
Sbjct: 365 CVIKIPDNHNDEVGIEMRLKAENVPTDTRTNFTCEFVWNSTSFDRMQAALSLLGQDEDCV 424
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
S +IYH L+GH+++ + + +LP+RF PGLPELN SQV AVK+VLQRP+SLIQGPPGTG
Sbjct: 425 SQFIYHKLMGHDIDDIIFKVSLPKRFSVPGLPELNHSQVHAVKTVLQRPLSLIQGPPGTG 484
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KTVTSA IVYH+ KQ GQVLVCAPSN+AVDQLAEKI TGLKVVRLCAKSRE + SPV
Sbjct: 485 KTVTSATIVYHLVKQTNGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSRETLDSPVA 544
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
L LH Q++ L + +ELHKLQQLK+E GEL+ +DE++++AL+ A E ++ +ADVICC
Sbjct: 545 FLALHNQLKALHGA--AELHKLQQLKEEIGELADADERRFRALRIAKECQLLAAADVICC 602
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCV A D RL++ R + VLIDESTQATEPE ++ +V G +Q+VLVGDHCQLGPVIMCKKA
Sbjct: 603 TCVSAADSRLSHMRIKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKA 662
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
A+AGL+QSLFERLVLLG +PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT ERQ GI
Sbjct: 663 AKAGLSQSLFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGERQLIGI 722
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
D+ WPVP++PM F+ GQEE+S+SGTS+LNRTEAANVEK+ T FL++G+ P QIG+ITP
Sbjct: 723 DWQWPVPDKPMMFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQIGIITP 782
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQ------------------------- 752
YEGQR+YIV +M GAL +LY E+EVA+VD+FQ
Sbjct: 783 YEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQSYQQVGYSTETSRTLPLKVIGRSMR 842
Query: 753 ----GREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
GREKD II++CVRSN+HQGIGFLND RRLNVALTRA++G++I+GN KVLS+ PLWN
Sbjct: 843 FLHTGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVLSRHPLWN 902
Query: 809 GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKI 841
LL+ +KE CLVEGPLNNLK S + KP+++
Sbjct: 903 YLLSVFKEKGCLVEGPLNNLKPSPITLSKPRRV 935
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 73/120 (60%), Gaps = 25/120 (20%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HACRYCG+ +PA V C + C+KWFCN RG+TS HIV HLVR++HKEV LHK+ LGE
Sbjct: 83 HACRYCGIHDPATVAMCII--CQKWFCNGRGSTSAGHIVIHLVRSQHKEVSLHKEGALGE 140
Query: 203 TILECYN---CG-------------CR-------NVFLLGFISAKTESVVVLLCREPCLN 239
T E CG C N+F+LG+I AK ++VVV+LCR PC N
Sbjct: 141 TEFEAKRPDACGMLVASGIKRQSGTCEIMSSLEGNIFMLGYIPAKADTVVVVLCRSPCAN 200
>gi|281210252|gb|EFA84419.1| helicase [Polysphondylium pallidum PN500]
Length = 1113
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/616 (60%), Positives = 460/616 (74%), Gaps = 8/616 (1%)
Query: 240 MMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+M+ES S+DNV+IRWD GL+KK A F F + D EL++VPGDEL+L Y+GD+ +P W+S
Sbjct: 362 VMRESLSQDNVSIRWDQGLSKKWTAIFSFSRSDYELKVVPGDELKLIYAGDSQYPEWEST 421
Query: 300 GHVIKLT----AQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDET 355
G V K+ A E++LEL S P F +D +W+STSFDRM A+K FAV
Sbjct: 422 GRVTKINDESEAYMEISLELYNSHNAPTKATGKFKIDMLWRSTSFDRMHAALKAFAVSTD 481
Query: 356 SVSGYIYHHLLGHEVEVQMVRNT-LPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
S+S ++YH LLGH+ N +P F LP LN SQ+ A VL+ P+SLIQGPP
Sbjct: 482 SISSHLYHALLGHDDRRLPKTNVPMPTNFAVHNLPPLNNSQISAAMKVLKSPLSLIQGPP 541
Query: 415 GTGKTVTSAAIVYHMAKQG---QGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA 471
GTGKTV S+ IV+H+ K +VLVCAPSNVA+DQL K+ + GLKVVRLC+K RE
Sbjct: 542 GTGKTVVSSFIVHHIVKHAIKKNEKVLVCAPSNVAIDQLTGKLHSIGLKVVRLCSKLREE 601
Query: 472 VSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQS 531
V+SPVEHLTLH+QV LD+ + EL K +QLKDEQGELS++D+ +Y ALKR E +I +
Sbjct: 602 VASPVEHLTLHHQVWQLDSHGRGELAKFKQLKDEQGELSTNDDHRYFALKRHAESKILKE 661
Query: 532 ADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
ADVI TCVGAGDPRL+ +F VLIDESTQA+EPECLIPL+LGAKQVVLVGDHCQLGPV
Sbjct: 662 ADVIATTCVGAGDPRLSKLKFPYVLIDESTQASEPECLIPLMLGAKQVVLVGDHCQLGPV 721
Query: 592 IMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE 651
++ KK AGL+QSLFERL+ LG P RL QYRMHPSLSEFPS++FYEG L N ++ +
Sbjct: 722 LLAKKVIEAGLSQSLFERLINLGHHPFRLTTQYRMHPSLSEFPSSTFYEGQLVNELSYKD 781
Query: 652 RQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ 711
R + I FPWP PN PMFFY G EEIS+SGTS++NR EA+ EKIVT L G P Q
Sbjct: 782 RVYNDIKFPWPSPNNPMFFYNSTGAEEISSSGTSFINRMEASTTEKIVTKLLELGTKPHQ 841
Query: 712 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
IG+ITPYEGQR+++VN M + G L +LY+EIEVASVDSFQGREKD+IILSCVRSN++QG
Sbjct: 842 IGIITPYEGQRSFLVNNMQKTGKLSIELYREIEVASVDSFQGREKDFIILSCVRSNDNQG 901
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQS 831
IGFL+DPRRLNVALTRARYG++ILGN +VLS+ LWN L+ H+K E LVEG + NLKQS
Sbjct: 902 IGFLHDPRRLNVALTRARYGLIILGNARVLSRDQLWNNLICHFKSKEVLVEGTIQNLKQS 961
Query: 832 MVQFQKPKKIYNDRRL 847
MV QKPKK+Y + +L
Sbjct: 962 MVVLQKPKKLYGEGKL 977
Score = 176 bits (446), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 117 GMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTS 176
GM+ +S + +D E + D +HACRYCG+ +P+ VVRC PSC KWFCN +G T+
Sbjct: 135 GMS-MSSQLNFEDPEDMDTINIDLPDHACRYCGLHDPSTVVRCMHPSCGKWFCNGKGKTT 193
Query: 177 GSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREP 236
SHIVNHLV+AKH E+ LH +SP G+T+LECYNCGC+N+FLLGFI AK ESVV+LLCR+P
Sbjct: 194 SSHIVNHLVKAKHNEISLHSESPFGDTVLECYNCGCKNIFLLGFIPAKMESVVILLCRDP 253
Query: 237 CLNMMKESQSKD 248
C KES + D
Sbjct: 254 CAMGGKESSNWD 265
>gi|412990683|emb|CCO18055.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 1020
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/607 (61%), Positives = 469/607 (77%), Gaps = 14/607 (2%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGH 301
KESQ NV++RWD+GLN +RV YF F ++ L+++ GDEL W+ G
Sbjct: 297 KESQHMGNVSVRWDVGLNARRVMYFGFSSDEEHLKILLGDELVAILKSVDGREIWRGDGT 356
Query: 302 VIKLTA-QEEVALELRASQGV--PVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
VI+ +EE+ LEL A V PV + G+ ++ VWKS S+DR Q A+K FAVD+TSVS
Sbjct: 357 VIRYNVKEEEIGLELDARSCVDAPVHVTSGYEIECVWKSVSYDRCQAALKAFAVDDTSVS 416
Query: 359 GYIYHHLLGHEVEVQMVRN-------TLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQ 411
GYIYH LLGH+V ++ + + +++ AP LPELN SQ+ AVK VLQ+P+SLIQ
Sbjct: 417 GYIYHKLLGHDVNESVMHHRGSNIDVSGKQKWSAPNLPELNHSQIAAVKMVLQQPLSLIQ 476
Query: 412 GPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA 471
GPPGTGKTVTSA IVYH+A +G GQV+V APSNVAVDQLAEKI TGLKVVR+ A+SRE
Sbjct: 477 GPPGTGKTVTSATIVYHLATKGDGQVIVAAPSNVAVDQLAEKIEKTGLKVVRIVARSREH 536
Query: 472 VSSPVEHLTLHYQVRHLDTSEKS-ELHKLQQLKDEQGELSSSDEKKY-KALKRATEREIS 529
V+S VEHL LHYQV+ + EK+ +L KLQ+LKD GELS DEK+Y KALK+ E +I
Sbjct: 537 VNSAVEHLALHYQVQRIAEKEKNGQLAKLQRLKDSIGELSQEDEKRYYKALKK-IENDII 595
Query: 530 QSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLG 589
Q+ADV+C T VGAGD RL +RFRQVL DESTQATEPE LIP+++GAKQVV+VGDHCQLG
Sbjct: 596 QNADVVCVTAVGAGDRRLEKYRFRQVLFDESTQATEPETLIPIIMGAKQVVMVGDHCQLG 655
Query: 590 PVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 649
PV+ C+ A+RAGL+QSLFERL+ +G++PIRLQVQYRMHP LSEFPSN+FYEGTLQNGVT
Sbjct: 656 PVVTCRSASRAGLSQSLFERLIFMGVQPIRLQVQYRMHPCLSEFPSNAFYEGTLQNGVTE 715
Query: 650 NERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP 709
ER S FPWP P++PM F+ QMG EE+SASG SYLNR EA VEKIVT L++G+ P
Sbjct: 716 AERADSEDVFPWPCPSKPMLFWAQMGVEEMSASGYSYLNRGEAYAVEKIVTHLLQNGIAP 775
Query: 710 SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEH 769
+IGV+TPYEGQRAY+VNY++R G L +Y+E+EVASVD+FQGREK YII++CVRSN+
Sbjct: 776 EEIGVVTPYEGQRAYVVNYLTRTGVLHPSIYQEVEVASVDAFQGREKQYIIVTCVRSNDR 835
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG-PLNNL 828
QGIGFLNDPRRLNVALTRA+ G++I+GNPKVL+KQPL+ +L H+++++CLVEG +N L
Sbjct: 836 QGIGFLNDPRRLNVALTRAKLGLMIVGNPKVLAKQPLFRDMLQHFRDNKCLVEGNNINQL 895
Query: 829 KQSMVQF 835
+ MV
Sbjct: 896 NECMVAL 902
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSR-GNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
HAC YCG+SNPACVVRC KWFCNS+ G S +V HLV+++ + LH DSPLG
Sbjct: 92 HACSYCGISNPACVVRCK--KTNKWFCNSKTGALPASCVVFHLVKSRSNAIALHPDSPLG 149
Query: 202 ETILECYNCGCRNVFLLGFISAKTES--VVVLLCREPCLNMMKESQSKDNVTIRWD--IG 257
E CY NVF LGFI K E V LL R+ L ++ D +W+ +
Sbjct: 150 ELEPACYVTDSTNVFNLGFIVKKDEDPPTVALLSRDVVLQPTAALKALDLDLTKWEPVVT 209
Query: 258 LNKKRVAYFVFPKEDNE 274
+K +++ V ++ E
Sbjct: 210 EDKTILSWLVNEPDERE 226
>gi|256082379|ref|XP_002577434.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662752|emb|CAZ33672.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1325
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/607 (62%), Positives = 466/607 (76%), Gaps = 10/607 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFP--KEDNELRLVPGDELRLRYSGDAAHPAWQS 298
+KES +NV++RW+ LNK+RVAYF P E ELR++ GDEL +R ++ +
Sbjct: 296 IKESLKLENVSVRWETALNKRRVAYFRIPGANEGPELRIMHGDELIIR-QFNSPNDYLVG 354
Query: 299 VGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
GHVIK+ +EV LE++ P++ + ++F WKST FDRM+ A+ ++
Sbjct: 355 DGHVIKVPDNFSDEVGLEMKQVIDTPLE-PVTYKIEFKWKSTPFDRMRRAISVVTDEQHG 413
Query: 357 V-SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPG 415
+ YI++ LLG E++ +++ LP+R+ AP LPELN SQVFAVK+VLQRP+SLIQGPPG
Sbjct: 414 LLPPYIFYRLLGQELDDMVLKCNLPKRYSAPDLPELNHSQVFAVKTVLQRPLSLIQGPPG 473
Query: 416 TGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSP 475
TGKTVTSA+IVYH+ + Q +VLV APSN AVDQL EKI TGLKVVRLCA+SREA++SP
Sbjct: 474 TGKTVTSASIVYHLNQIHQKKVLVVAPSNTAVDQLCEKIDRTGLKVVRLCARSREALASP 533
Query: 476 VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVI 535
V L LH Q +++ +EL KLQQLKDE GELS D+K+Y+ LKR ERE+ +ADV+
Sbjct: 534 VSRLMLHIQAQNVKG--HTELRKLQQLKDETGELSQDDDKRYRVLKRELERELLMAADVV 591
Query: 536 CCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
CCTCV AGD RL F VLIDESTQATEPECLIPL++G +QVVLVGDHCQLGPVI CK
Sbjct: 592 CCTCVTAGDARLERLSFHSVLIDESTQATEPECLIPLMVGCRQVVLVGDHCQLGPVITCK 651
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
KAA AGL QSLFER VLLG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R
Sbjct: 652 KAASAGLTQSLFERFVLLGIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDR-CK 710
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
IDFPWP P+RPMFFY GQEEIS +G SYLNRTEAA VEKIVT L+ GV P+ IGVI
Sbjct: 711 KIDFPWPNPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGVHPNTIGVI 770
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPYEGQRAY+ +Y+ +G+L +LY+EIE+ASVD+FQGREKDYIILSCVR+NE+QGIGFL
Sbjct: 771 TPYEGQRAYLAHYLHYSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFL 830
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
NDPRRLNVALTRARYG++++GNPK L KQPLWN LL Y++ LVEGPLNNL + M+QF
Sbjct: 831 NDPRRLNVALTRARYGLIVVGNPKALCKQPLWNQLLHFYRDQHLLVEGPLNNLGEYMLQF 890
Query: 836 QKPKKIY 842
+PK Y
Sbjct: 891 PRPKVPY 897
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 91/126 (72%), Gaps = 7/126 (5%)
Query: 118 MAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
+A L F++ D D EHAC YCG+ +PACVV CN + +KWFCN RGNTSG
Sbjct: 79 VADLDFKDEDQDDS-----SVDLPEHACAYCGIHDPACVVFCN--TTKKWFCNGRGNTSG 131
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
SHI+NHLVRA+ KEV LHKD PL +T+LECY CG +NVFLLGF+ AK+ESVVVLLCR C
Sbjct: 132 SHIINHLVRARAKEVTLHKDGPLKDTLLECYVCGSKNVFLLGFVPAKSESVVVLLCRNIC 191
Query: 238 LNMMKE 243
N K+
Sbjct: 192 ANANKD 197
>gi|256082381|ref|XP_002577435.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662753|emb|CAZ33673.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1301
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/607 (62%), Positives = 466/607 (76%), Gaps = 10/607 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFP--KEDNELRLVPGDELRLRYSGDAAHPAWQS 298
+KES +NV++RW+ LNK+RVAYF P E ELR++ GDEL +R ++ +
Sbjct: 272 IKESLKLENVSVRWETALNKRRVAYFRIPGANEGPELRIMHGDELIIR-QFNSPNDYLVG 330
Query: 299 VGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
GHVIK+ +EV LE++ P++ + ++F WKST FDRM+ A+ ++
Sbjct: 331 DGHVIKVPDNFSDEVGLEMKQVIDTPLE-PVTYKIEFKWKSTPFDRMRRAISVVTDEQHG 389
Query: 357 V-SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPG 415
+ YI++ LLG E++ +++ LP+R+ AP LPELN SQVFAVK+VLQRP+SLIQGPPG
Sbjct: 390 LLPPYIFYRLLGQELDDMVLKCNLPKRYSAPDLPELNHSQVFAVKTVLQRPLSLIQGPPG 449
Query: 416 TGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSP 475
TGKTVTSA+IVYH+ + Q +VLV APSN AVDQL EKI TGLKVVRLCA+SREA++SP
Sbjct: 450 TGKTVTSASIVYHLNQIHQKKVLVVAPSNTAVDQLCEKIDRTGLKVVRLCARSREALASP 509
Query: 476 VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVI 535
V L LH Q +++ +EL KLQQLKDE GELS D+K+Y+ LKR ERE+ +ADV+
Sbjct: 510 VSRLMLHIQAQNVKG--HTELRKLQQLKDETGELSQDDDKRYRVLKRELERELLMAADVV 567
Query: 536 CCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
CCTCV AGD RL F VLIDESTQATEPECLIPL++G +QVVLVGDHCQLGPVI CK
Sbjct: 568 CCTCVTAGDARLERLSFHSVLIDESTQATEPECLIPLMVGCRQVVLVGDHCQLGPVITCK 627
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
KAA AGL QSLFER VLLG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R
Sbjct: 628 KAASAGLTQSLFERFVLLGIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDR-CK 686
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
IDFPWP P+RPMFFY GQEEIS +G SYLNRTEAA VEKIVT L+ GV P+ IGVI
Sbjct: 687 KIDFPWPNPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGVHPNTIGVI 746
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPYEGQRAY+ +Y+ +G+L +LY+EIE+ASVD+FQGREKDYIILSCVR+NE+QGIGFL
Sbjct: 747 TPYEGQRAYLAHYLHYSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFL 806
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
NDPRRLNVALTRARYG++++GNPK L KQPLWN LL Y++ LVEGPLNNL + M+QF
Sbjct: 807 NDPRRLNVALTRARYGLIVVGNPKALCKQPLWNQLLHFYRDQHLLVEGPLNNLGEYMLQF 866
Query: 836 QKPKKIY 842
+PK Y
Sbjct: 867 PRPKVPY 873
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 91/126 (72%), Gaps = 7/126 (5%)
Query: 118 MAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
+A L F++ D D EHAC YCG+ +PACVV CN + +KWFCN RGNTSG
Sbjct: 55 VADLDFKDEDQDDS-----SVDLPEHACAYCGIHDPACVVFCN--TTKKWFCNGRGNTSG 107
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
SHI+NHLVRA+ KEV LHKD PL +T+LECY CG +NVFLLGF+ AK+ESVVVLLCR C
Sbjct: 108 SHIINHLVRARAKEVTLHKDGPLKDTLLECYVCGSKNVFLLGFVPAKSESVVVLLCRNIC 167
Query: 238 LNMMKE 243
N K+
Sbjct: 168 ANANKD 173
>gi|19113992|ref|NP_593080.1| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe 972h-]
gi|19924241|sp|Q09820.2|RENT1_SCHPO RecName: Full=ATP-dependent helicase upf1; AltName:
Full=Nonsense-mediated mRNA decay protein upf1; AltName:
Full=Regulator of nonsense transcripts 1 homolog;
AltName: Full=Up-frameshift suppressor 1
gi|4894186|emb|CAA91194.2| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe]
Length = 925
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/616 (59%), Positives = 469/616 (76%), Gaps = 15/616 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++ +V +RWD +NK+ A+F+ PK E E+RL GDE++L Y G+ P W S
Sbjct: 241 LKESQTQKDVVVRWDQAINKRYTAWFLLPKLESGEIRLAIGDEMKLTYEGELRAP-WSST 299
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
G+VIK+ +EV LEL+ S VP++ H FSVD+VWKSTSFDRMQ A++ FA D + +
Sbjct: 300 GYVIKIPNNVSDEVGLELKRSDKVPIECTHNFSVDYVWKSTSFDRMQTALRLFATDGSRL 359
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
S ++YH LLGH++ ++ LP P LP+LNASQ AV++VL +P+SLIQGPPGTG
Sbjct: 360 SSFLYHKLLGHDIPPSFLKPKLPSDLSVPNLPKLNASQSEAVRAVLSKPLSLIQGPPGTG 419
Query: 418 KTVTSAAIVYHMA------KQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA 471
KTVTSA++VYH+A ++ VLVCAPSNVAVDQLAEKI TGL+VVR+ AKSRE
Sbjct: 420 KTVTSASVVYHLATMQSRKRKSHSPVLVCAPSNVAVDQLAEKIHRTGLRVVRVAAKSRED 479
Query: 472 VSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQS 531
+ S V L+LH Q+++ + EL +L +L+ E ELS DEKK + L A E+E+ ++
Sbjct: 480 IESSVSFLSLHEQIKNYKFN--PELQRLLKLRSENNELSIQDEKKLRILVAAAEKELLRA 537
Query: 532 ADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
A VICCTCVGAGD R++ ++FR VLIDE+TQA+EPEC+IPLVLGAKQVVLVGDH QLGPV
Sbjct: 538 AHVICCTCVGAGDRRISKYKFRSVLIDEATQASEPECMIPLVLGAKQVVLVGDHQQLGPV 597
Query: 592 IMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE 651
+M KK A A L+QSLFERL++LG P RL VQYRMHP LSEFPSN+FYEGTLQNGVT +E
Sbjct: 598 VMNKKVALASLSQSLFERLIILGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSE 657
Query: 652 RQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ 711
R + +DFPW P+ P+ FY GQEE+SASGTS+LNRTEA+ EKIVTTFLRS V+P Q
Sbjct: 658 RIARHVDFPWIQPDSPLMFYANFGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQ 717
Query: 712 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
IG++TPY+GQR+YIV YM NG++++ LYK +EVASVD+FQGREKD+IILSCVRS+EHQG
Sbjct: 718 IGIVTPYDGQRSYIVQYMQNNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQG 777
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQS 831
IGF+NDPRRLNVALTRA+YG+++LGNPKVL+K LW + H KE LVEG LN+L++
Sbjct: 778 IGFVNDPRRLNVALTRAKYGVIVLGNPKVLAKHALWYHFVLHCKEKGYLVEGTLNSLQKF 837
Query: 832 MVQF---QKPKKIYND 844
+ QKP+K D
Sbjct: 838 SLTLTPPQKPQKFKRD 853
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 94/144 (65%), Gaps = 14/144 (9%)
Query: 140 FTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSP 199
++E C YC + NP +++C C KWFCN RG + SHI++HLVRA+HK+V LH S
Sbjct: 39 YSEEHCAYCHIKNPNSILKC--LHCNKWFCNVRGKSGASHIISHLVRARHKQVALHSHSS 96
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD---- 255
L +T+LECYNCG RNVFLLGFI AK ++VVVLLCR+PC + S +KD + WD
Sbjct: 97 LSDTVLECYNCGTRNVFLLGFIPAKAKTVVVLLCRQPC---ARASIAKD---MNWDLTQW 150
Query: 256 --IGLNKKRVAYFVFPKEDNELRL 277
I +++ + + + P + E +L
Sbjct: 151 QPIISDRQFLPWLITPPSEEEQKL 174
>gi|320168749|gb|EFW45648.1| RENT1 [Capsaspora owczarzaki ATCC 30864]
Length = 1120
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/663 (57%), Positives = 482/663 (72%), Gaps = 20/663 (3%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGH 301
KESQ+ RW +GLNKK A+FV P++D + R V GDELRLRY+G+ P W GH
Sbjct: 352 KESQASLEGCCRWGVGLNKKITAHFVLPRQDGDYRTVHGDELRLRYAGELGRP-WAGEGH 410
Query: 302 VIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
V+ L + E + LEL +S GVP + H F VDFVWKST+FDRMQ A+KTFAVDE VS
Sbjct: 411 VLVLPGSTTEGITLELWSSNGVPTHLTHNFHVDFVWKSTTFDRMQAALKTFAVDEKCVSS 470
Query: 360 YIYHHLLGHEVEVQMV-RNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YI+H LLG EVE++ R ++P AP LP+LN SQ+ A+ VL+ P SLIQGPPGTGK
Sbjct: 471 YIFHKLLGKEVELKDEHRVSVPENLNAPNLPKLNESQMSAITRVLREPFSLIQGPPGTGK 530
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA +VYH++K GQ VLVCAPSN+AVDQL E+I TGLKVVRL AKSREA+ S V
Sbjct: 531 TVTSATLVYHLSKFGQ--VLVCAPSNIAVDQLTERIHRTGLKVVRLAAKSREAIESSVSF 588
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R +++ EL KL QL++EQ L DE++++ LK A ER+ ++ADVIC T
Sbjct: 589 LALHSQIR--NSAAHPELAKLMQLREEQNGLDDVDERRFRQLKFAAERDFLKNADVICTT 646
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA RFR VL+DE+TQATEPE +IP+V+GAKQVVLVGDHCQLGPV+MCKKAA
Sbjct: 647 CVGAGDPRLARMRFRAVLVDEATQATEPEAIIPIVMGAKQVVLVGDHCQLGPVVMCKKAA 706
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+A QSLFERLV+ +PIRL++QYRMHP LS FPS++FYEG+LQNGV +R
Sbjct: 707 KANFTQSLFERLVMGQNRPIRLEIQYRMHPCLSAFPSDTFYEGSLQNGVLAADRTPKTPA 766
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP PN PMFF+ +GQEE+SASGTSYLNR EA++VEK+VT L+SG P QIGVITPY
Sbjct: 767 FTWPDPNNPMFFWSNLGQEELSASGTSYLNRAEASSVEKLVTQLLKSGTKPDQIGVITPY 826
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
EGQRA+I+ M+ NG LR QLY++IEVASVD+FQGREKDYIILSCVRS GIGFLNDP
Sbjct: 827 EGQRAFILQTMTANGVLRSQLYQQIEVASVDAFQGREKDYIILSCVRS---AGIGFLNDP 883
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RRLNVALTRARYG+V++GN L++ PLWN ++T+++ H+ +EG L L+ ++ P
Sbjct: 884 RRLNVALTRARYGLVVIGNAHRLARDPLWNEVITYFRNHKLFMEGSLTALRDCGMRIPNP 943
Query: 839 KKI-YNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHPAGFP 897
+ + ++ RL I ++ ++P A ++G PP P N + + G H +GF
Sbjct: 944 EGVRFSASRLRRAVDEQI---NLHGTHPFAQQQGP-----APPAPRNSSRRNGGHNSGFS 995
Query: 898 MPR 900
R
Sbjct: 996 AQR 998
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 93/129 (72%), Gaps = 12/129 (9%)
Query: 139 DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDS 198
D EHAC+YCG+ +PA VV C CRKWFCN+ T+ SHIV+HLVRAKHK+V LHKDS
Sbjct: 148 DLPEHACKYCGIHSPASVVCC--LKCRKWFCNASHGTAASHIVHHLVRAKHKDVGLHKDS 205
Query: 199 PLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIG- 257
P+G+ LECYNCGCRNVF+LGFI AK +SVV+LLCR+PC + SKD WD+
Sbjct: 206 PIGDEKLECYNCGCRNVFVLGFIPAKADSVVMLLCRQPCAGAV---LSKDT---NWDLST 259
Query: 258 ---LNKKRV 263
L K+RV
Sbjct: 260 WEPLIKERV 268
>gi|403337792|gb|EJY68119.1| hypothetical protein OXYTRI_11366 [Oxytricha trifallax]
Length = 1153
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/609 (59%), Positives = 461/609 (75%), Gaps = 4/609 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
KESQ++ N+ +R+D LNKK+ A+F+FP EDN +RLVPGDEL+L Y + P WQS G
Sbjct: 414 FKESQTQRNIRVRFDYSLNKKKQAFFIFPNEDN-IRLVPGDELKLVYEYEG-QPKWQSRG 471
Query: 301 HVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGY 360
H++++ EE+ LEL+ +G P D + F+++F+WKSTSFDRM+ A+K F DE S+S Y
Sbjct: 472 HIVRI-VNEEICLELKNPKGCPNDPDIRFTIEFIWKSTSFDRMRLALKIFMRDEQSLSNY 530
Query: 361 IYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTV 420
I++ LLG+ + Q ++ +P+ PGLPELN Q+ AVK L P+ LIQGPPGTGKTV
Sbjct: 531 IFYKLLGYNTQEQFIKTNIPKHLSVPGLPELNHFQMNAVKKALITPLCLIQGPPGTGKTV 590
Query: 421 TSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLT 480
TS +V H+ KQ G+VLVCAPSN+AVDQL +KI++TG+KVVR+CA+SRE+VSS V++L+
Sbjct: 591 TSTTLVTHLVKQKMGKVLVCAPSNIAVDQLTDKINSTGIKVVRMCARSRESVSSNVDYLS 650
Query: 481 LHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCV 540
LH Q+++L + +L K+EQ EL+ +E++ K LKR E EI ++A+VIC TCV
Sbjct: 651 LHEQIKYLSHGPFKLMQELILKKEEQNELTEKEERQLKELKRQAEDEILKNAEVICTTCV 710
Query: 541 GAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
A D RL NF+F QVLIDE+TQATEPE LIP++ GAK V+LVGDHCQLGPVIMCKKAA+A
Sbjct: 711 AAFDRRLRNFKFSQVLIDEATQATEPETLIPILRGAKHVILVGDHCQLGPVIMCKKAAKA 770
Query: 601 GLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
GL QSLFERLV LG++PIRLQVQYRMHP LS FPS +FYEG+LQNG++ +R S F
Sbjct: 771 GLNQSLFERLVCLGIRPIRLQVQYRMHPVLSAFPSMTFYEGSLQNGISKQDRILSDFKFQ 830
Query: 661 WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEG 720
WP +PM FY + EEISASGTS+LNR EA NVE +VT FL+ + P QIG+ITPYEG
Sbjct: 831 WPASEKPMMFYHSISNEEISASGTSFLNRQEAYNVEALVTQFLKFDLKPEQIGIITPYEG 890
Query: 721 QRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
Q+A+I +YM R+G L LYKEIEVASVDSFQGREKD+I+LSCVRSNE GIGFLNDPRR
Sbjct: 891 QKAFITSYMQRSGQLDPSLYKEIEVASVDSFQGREKDFILLSCVRSNEASGIGFLNDPRR 950
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGP-LNNLKQSMVQFQKPK 839
LNVALTRA+YG+VI GN KVLSK LWN LL +K CLVEGP + NLK ++ ++P
Sbjct: 951 LNVALTRAKYGLVIFGNAKVLSKHDLWNNLLNEFKNQGCLVEGPNIFNLKPCVIVLRRPV 1010
Query: 840 KIYNDRRLF 848
K D+R F
Sbjct: 1011 KYNPDKRDF 1019
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 105/156 (67%), Gaps = 15/156 (9%)
Query: 104 NNSSN--TSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNV 161
NNSS+ + S+I E + + E VE +++ + +HAC YCG+ P CVV+C++
Sbjct: 177 NNSSSHFDARSEISESVGSVDLEA----VEPYDFN--NLPQHACAYCGIHEPECVVKCSI 230
Query: 162 PSCRKWFCNSRG-NTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGF 220
C +WFCN +G N GSHI+ H V+++HKE+ LH DSPL +T++ECYNC +N+FLLGF
Sbjct: 231 KECNRWFCNGKGINEYGSHIMLHQVKSRHKEISLHPDSPLKDTVIECYNCSSKNIFLLGF 290
Query: 221 ISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
+SAK E+V++LLCREPCL+ + SK WD+
Sbjct: 291 VSAKQEAVIILLCREPCLSQLSVKDSK------WDM 320
>gi|294929939|ref|XP_002779430.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239888538|gb|EER11225.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 923
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/620 (60%), Positives = 472/620 (76%), Gaps = 27/620 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYF-VFPKEDNE-LRLVPGDELRLRYSG-DAAHPAWQ 297
+KESQ+K ++ +RWD+ + +R AYF VF +E+ +LVPGDE+RL+ + + + W
Sbjct: 301 VKESQAKHDIKLRWDLNMGNRRCAYFPVFTREETAGAKLVPGDEIRLKLADWGSDNEGWI 360
Query: 298 SVGHVIKLT-AQEEVALELR---ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVD 353
VGHV KL + EEV +ELR + Q P DI G++V+FVWK+TSFDRMQ A+K FAVD
Sbjct: 361 GVGHVTKLMQSSEEVCVELRPQYSHQKGPWDITSGYTVEFVWKATSFDRMQNALKAFAVD 420
Query: 354 ETSVSGYIYHHLLGHEVEVQM-VR-NTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQ 411
+TSVSG IYH LLG +E +R + P+ + AP LP+LN SQV AV+ L++P+SLIQ
Sbjct: 421 DTSVSGVIYHMLLGQAIETNTTIRIHNPPKNWTAPNLPQLNHSQVQAVQKALEQPLSLIQ 480
Query: 412 GPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA 471
GPPGTGKTVTSA I+YH+A+Q QGQVLV APSN+AVDQLAEKI TGLKVVR+ AKSRE
Sbjct: 481 GPPGTGKTVTSATIIYHLARQHQGQVLVTAPSNIAVDQLAEKIHLTGLKVVRILAKSREC 540
Query: 472 VSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQS 531
+ SPVE L+LH Q+R++ T + E KL LK+E GEL+SSDEK+++ L+ ERE+ ++
Sbjct: 541 LYSPVEFLSLHTQIRNMRTPQAKEFKKLFDLKEEVGELTSSDEKRFRILRSQVERELLEN 600
Query: 532 ADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
ADVIC TC GAGDPRL RF+ VL+DE+TQA EPE LIP+ GAKQV+LVGDH QLGPV
Sbjct: 601 ADVICTTCAGAGDPRLGKLRFKMVLVDEATQACEPEALIPICNGAKQVILVGDHKQLGPV 660
Query: 592 IMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE 651
+MCKKAA+AG QSLFERL+ LG++PIRL+VQYRMHPSL+EFPS +FY+G LQNG+T+ +
Sbjct: 661 VMCKKAAKAGFKQSLFERLIALGVRPIRLEVQYRMHPSLAEFPSQTFYDGCLQNGITMED 720
Query: 652 RQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ 711
RQ SG+ FPWP PMFFY GQEEISASGTSYLNR+EA N+EKI+T FLR+G+ SQ
Sbjct: 721 RQVSGVKFPWPREEMPMFFYNSTGQEEISASGTSYLNRSEAINIEKIITYFLRAGLKGSQ 780
Query: 712 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
IGV+TPYEGQRAYI + R L ++Y+ IE+ASVD+FQGREKD+I+LSCVRSN+ G
Sbjct: 781 IGVVTPYEGQRAYIQQVLQRQTTLSAKMYESIEIASVDAFQGREKDFIVLSCVRSNQRAG 840
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ------------------PLWNGLLTH 813
+GFLNDPRRLNVALTRARYG+VI GN +VL++ +WNGLL+H
Sbjct: 841 LGFLNDPRRLNVALTRARYGLVICGNAQVLARATTVGHQGRGRMTVIRSMPSVWNGLLSH 900
Query: 814 YKEHECLVEGPLNNLKQSMV 833
K+ + +VEGPL+ L+QS V
Sbjct: 901 MKKFDLIVEGPLSALRQSHV 920
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 10/61 (16%)
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCL--NMMKESQSKDNVTIRWDIG 257
LG ++LECY CG NVF+LGFI +KT+SVVVL+CREPCL N +K+ + WDI
Sbjct: 152 LGASLLECYVCGNTNVFVLGFIPSKTDSVVVLICREPCLGSNTLKDDE--------WDIS 203
Query: 258 L 258
+
Sbjct: 204 M 204
>gi|339251874|ref|XP_003371160.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
gi|316968637|gb|EFV52895.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
Length = 1030
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/618 (61%), Positives = 457/618 (73%), Gaps = 38/618 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN----------------ELRLVPGDELR 284
+KE+QS+ N+T+RWD+GLNKKR+AYF K + E++L+ GDELR
Sbjct: 270 LKEAQSQQNITVRWDVGLNKKRIAYFSLNKISDTGRVSHKSYMQHLNVCEVKLMTGDELR 329
Query: 285 LRYSGDAAHPAWQSVGHVIKLTAQ--EEVALEL-RASQGVPVDINHGFSVDFVWKSTSFD 341
L + D W++ GHVIK+ EEV +EL A P D+ +G+SVDFVWKSTSFD
Sbjct: 330 LNSNFDGK--VWRASGHVIKVPDNFGEEVGIELINAHDAPPPDVTYGYSVDFVWKSTSFD 387
Query: 342 RMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKS 401
RM A++ D+ VS I+ +LGH+ E + P+ + APGLPELN SQV AV+
Sbjct: 388 RMFIALRKLT-DDGFVSHAIHRKILGHDYEAPPLNILYPKHYSAPGLPELNHSQVMAVRE 446
Query: 402 VLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKV 461
VL R ISLIQGPPGTGKTVTSA+IVYH+AK G +LVCAPSNVAV
Sbjct: 447 VLTRSISLIQGPPGTGKTVTSASIVYHLAKAGGTPILVCAPSNVAV-------------- 492
Query: 462 VRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALK 521
+R+CAKSREA+ SPV L LH QVR+L+ E EL KL QLK+E GELSS DE +++ L+
Sbjct: 493 IRMCAKSREAIDSPVSFLALHNQVRYLEGEE--ELDKLWQLKEETGELSSLDEYRFRFLR 550
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
ER++ + ADV+CCTCV AGDPR + RFR VLIDESTQATEPECLIP++ GA+QV+L
Sbjct: 551 SKCERDLLKHADVVCCTCVAAGDPRFNHIRFRAVLIDESTQATEPECLIPIMTGARQVIL 610
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEG 641
VGDHCQLGPV+MCKKAARAGL QSLFERLV+LG +PIRLQVQYRMHP LS PSN FYEG
Sbjct: 611 VGDHCQLGPVVMCKKAARAGLNQSLFERLVILGNRPIRLQVQYRMHPLLSSLPSNLFYEG 670
Query: 642 TLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTT 701
TLQNGVT ER G+DF WP P PMFF+ QEEIS+SGTS+LNR EAA++EKI T
Sbjct: 671 TLQNGVTEQERILEGVDFRWPNPTVPMFFWCTASQEEISSSGTSFLNRAEAAHIEKIATK 730
Query: 702 FLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
FLRSG+ QIG+ITPYEGQRAYIV +M +G L +LY+EIEVASVD+FQGREKD I+L
Sbjct: 731 FLRSGIRADQIGIITPYEGQRAYIVQHMLLSGPLNNKLYQEIEVASVDAFQGREKDIILL 790
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLV 821
SCVRSNEH GIGFLNDPRRLNVALTRARYG++I+GNPKVLS+QP+W+ LL +E+ CL+
Sbjct: 791 SCVRSNEHSGIGFLNDPRRLNVALTRARYGLIIVGNPKVLSRQPMWHSLLRFCRENHCLL 850
Query: 822 EGPLNNLKQSMVQFQKPK 839
+GPLN LK+ V F K K
Sbjct: 851 DGPLNALKEYKVDFNKGK 868
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 97/145 (66%), Gaps = 5/145 (3%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSR-GNTSGSHIVNHLVRAKHKEVCLHKDSPL 200
EHACRYCG P+ VV CN C+KWFCN R N++GSHIV HLVR++HKEV LH PL
Sbjct: 75 EHACRYCGYHEPSSVVLCNY--CKKWFCNGRLTNSAGSHIVTHLVRSRHKEVTLHSMGPL 132
Query: 201 GETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNK 260
GET+LECYNCGCRNVFLLGF+SA TESVVVLLCR+PC N + S K + D
Sbjct: 133 GETVLECYNCGCRNVFLLGFVSATTESVVVLLCRQPCAN--QNSDHKQWKPLICDKAFIS 190
Query: 261 KRVAYFVFPKEDNELRLVPGDELRL 285
V+ + N R+ P D ++L
Sbjct: 191 WLVSIPTLKEMKNTRRIAPADMVKL 215
>gi|414590337|tpg|DAA40908.1| TPA: hypothetical protein ZEAMMB73_069756 [Zea mays]
Length = 726
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/384 (94%), Positives = 374/384 (97%)
Query: 239 NMMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQS 298
MMKESQSKDNVT+RWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY GD++HP WQS
Sbjct: 301 KMMKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSHPTWQS 360
Query: 299 VGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
VGHVIKLTAQEEVALELRASQGVP ++N GFSVDFVWKSTSFDRMQGAMKTFAVDETSVS
Sbjct: 361 VGHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 420
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYHHLLGHEVE Q++RNTLPRRFGAPGLPELNASQV AVKSVLQ+P+SLIQGPPGTGK
Sbjct: 421 GYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGK 480
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS+TGLKVVRLCAKSREAVSSPVEH
Sbjct: 481 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEH 540
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREI QSADVICCT
Sbjct: 541 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCT 600
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRL+NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGDHCQLGPVIMCKKAA
Sbjct: 601 CVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAA 660
Query: 599 RAGLAQSLFERLVLLGLKPIRLQV 622
RAGLAQSLFERLV+LG+KP RLQV
Sbjct: 661 RAGLAQSLFERLVILGVKPFRLQV 684
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 138/216 (63%), Gaps = 6/216 (2%)
Query: 6 TNLFETASQPDT--GTDAYTFLEFNTQGES-DFDAYPEFRSPVSWPTPSDSLSVDPTTPV 62
+L+ETASQPD DAYTFLEFNTQG+ D+ +PE P TP S T
Sbjct: 13 VDLYETASQPDAPAAGDAYTFLEFNTQGDDFDYPDFPELSQPPPRSTPLTSSIPGAGTSS 72
Query: 63 TPATPSDSRSAPPASDHHHHHNHHRHSDSLAATSSPSKRGANNSSNTSTSQIVEGMAGLS 122
+ + AS + H+ +++S + + + + + G+ L+
Sbjct: 73 SSWPAPPPPPSDAASPEPDLTSQDVHTPPASSSSPSPRSASKARPSAAADGLASGVVALN 132
Query: 123 FEE---TGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSH 179
FE+ TG +G++Y K DF EHACRYCG+ NPACV RCNVPSCRKWFCNSRGNTSGSH
Sbjct: 133 FEDPVGTGAVEDGYDYSKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSH 192
Query: 180 IVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNV 215
IVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNV
Sbjct: 193 IVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNV 228
>gi|328865229|gb|EGG13615.1| helicase [Dictyostelium fasciculatum]
Length = 1162
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/694 (55%), Positives = 489/694 (70%), Gaps = 20/694 (2%)
Query: 240 MMKESQSKDNVTIRWDIGLNK-KRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPA-WQ 297
+M+ES ++D+V IRW+ GL+K K A F F + D E ++V GDEL++ + GD +P W+
Sbjct: 388 LMRESLTQDDVNIRWEQGLSKSKWFAQFSFSRSDFEFKVVVGDELKVSFKGDRDYPEPWE 447
Query: 298 SVGHVIKLTAQEEVALELRA---SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
S G + ++ + E ++E+ + P F +D VW+STSFDR+ A+K FA+ +
Sbjct: 448 SSGRITRIDEESEASMEITLELYNHNPPNKSKSKFKIDMVWRSTSFDRILIALKAFAIKQ 507
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPR--RFGAPGLPELNASQVFAVKSVLQRPISLIQG 412
++S Y+YH LLGH+ + V+ T+P+ F PGLP LNASQ+ A SVL+ P+SLIQG
Sbjct: 508 DAISSYLYHALLGHQPDATKVKVTVPQPTNFVLPGLPPLNASQISAACSVLKSPLSLIQG 567
Query: 413 PPGTGKTVTSAAIVYHMAK---QGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR 469
PPGTGKT+ SA +V+H+ +G+ ++LVCAPSNVA+DQLA K+ + GLKVVRLC+K R
Sbjct: 568 PPGTGKTLVSAFLVHHLVNHGIKGKEKLLVCAPSNVAIDQLAGKLHSVGLKVVRLCSKLR 627
Query: 470 EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREIS 529
E VSSPVE+LTLH+QV LD K L K + L++E GEL+ DE+K+ LK + ER I
Sbjct: 628 EEVSSPVENLTLHHQVAQLDQYGKGVLRKFKALREETGELNPEDERKFLVLKGSLERNIL 687
Query: 530 QSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLG 589
+ ADVIC TCVGAGDPRL + +F VLIDE+TQA+EPECLIPLVLGA+QVVLVGDHCQLG
Sbjct: 688 KEADVICTTCVGAGDPRLRDIKFPYVLIDEATQASEPECLIPLVLGARQVVLVGDHCQLG 747
Query: 590 PVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 649
PV++CKK AGL+ SLFERL+ LG P RL QYRMHP+LSEFPSN+FYEG L N ++
Sbjct: 748 PVLLCKKVQEAGLSLSLFERLIHLGHHPFRLTTQYRMHPALSEFPSNTFYEGQLVNEISY 807
Query: 650 NERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP 709
+R ++ F WP PNRPMFF+ G EEIS+SGTS++NRTEA EKIVT FL G P
Sbjct: 808 RDRVTNN-GFVWPHPNRPMFFHNSTGHEEISSSGTSFINRTEATLCEKIVTRFLELGTKP 866
Query: 710 SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEH 769
SQIG+ITPYEGQR+++VN M R G L LYKEIEVASVDSFQGREKD+IILSCVRSNE+
Sbjct: 867 SQIGIITPYEGQRSFLVNNMQRTGRLPSDLYKEIEVASVDSFQGREKDFIILSCVRSNEN 926
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
QGIGFL DPRRLNVALTRARYG++ILGN +VLS+ LWN L++H+K +E LVEG L NLK
Sbjct: 927 QGIGFLQDPRRLNVALTRARYGLIILGNARVLSRDLLWNNLISHFKANEVLVEGGLQNLK 986
Query: 830 QSMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPG---PPNGT 886
QS V QKP+KI+ + +L P D+ + + G PP PP+G
Sbjct: 987 QSSVVLQKPRKIHGEGKLPVAGAVMFTPGDLKPHQIDPQYAQNMVYGQRPPKYYQPPSGG 1046
Query: 887 HKPGLHPA--GFPMPRVPLP---PFQGGPPSQPY 915
G +P+ G+P P P GG PSQ Y
Sbjct: 1047 GGGGFYPSMGGYPQNAGGGPRGMPSSGG-PSQSY 1079
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 99/139 (71%), Gaps = 10/139 (7%)
Query: 118 MAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
M+ L+FE D E + + D HACRYCG+ +P VVRC+ SC KWFCN RG TS
Sbjct: 165 MSQLTFE----DPEDLDTIQVDLPPHACRYCGLHDPLTVVRCSNSSCGKWFCNGRGKTSS 220
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
+HIVNHLV+AKH E+ LH DSP G+ +LECYNCGCRN+FLLGFI AKTESVV+LLCR+PC
Sbjct: 221 AHIVNHLVKAKHNEISLHSDSPFGDAVLECYNCGCRNIFLLGFIPAKTESVVILLCRDPC 280
Query: 238 LNMMKESQSKDNVTIRWDI 256
+ SKDN WD+
Sbjct: 281 ----AMASSKDNPN--WDL 293
>gi|406607433|emb|CCH41224.1| ATP-dependent helicase NAM7 [Wickerhamomyces ciferrii]
Length = 1038
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/611 (58%), Positives = 446/611 (72%), Gaps = 9/611 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ ++++++W + LN K +A F E +EL++ GDE+ LRYSG H AW++
Sbjct: 295 LKESQALEHISVKWSLALNNKHLASFTLSTFESSELKVAVGDEMILRYSG-INHEAWEAK 353
Query: 300 GHVIKLTA--QEEVALELRASQGVP--VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDET 355
G +I++ + QEE LEL + P F+ +FVWK TS+DRMQ AMK+FA D+
Sbjct: 354 GFIIRIPSAHQEEFTLELSTNHKNPPPTQCTTDFTAEFVWKGTSYDRMQNAMKSFATDQL 413
Query: 356 SVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPG 415
SVSGYIYH LLGHEV LP +F PG ELN SQ AVK+VLQ+P+SLIQGPPG
Sbjct: 414 SVSGYIYHKLLGHEVNEVEFDIKLPSKFSIPGFAELNVSQASAVKNVLQKPLSLIQGPPG 473
Query: 416 TGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSP 475
TGKTVTSA I++H+ + ++LVCAPSNVAVD LA K+ GLKV+RL AKSRE V S
Sbjct: 474 TGKTVTSATIIHHLTNLNKDRILVCAPSNVAVDHLASKLDQLGLKVIRLTAKSREDVESS 533
Query: 476 VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVI 535
V+HL+L ++ S K +L KL +L++E GELS+ D K Y L R E+ I + ADV+
Sbjct: 534 VQHLSLSNIIQK---SAKGQLKKLLRLRNELGELSAEDTKTYFTLLRKKEKSILKQADVV 590
Query: 536 CCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
C TCVGAGD RL N FR +LIDESTQA+EPECLIPLV GAKQV+LVGDH QLGPVI+ K
Sbjct: 591 CATCVGAGDRRLENVNFRTILIDESTQASEPECLIPLVHGAKQVILVGDHQQLGPVILDK 650
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
KA AGL QSLFERLV+LG PIRL+VQYRM+P LSEF SN FY+G+LQNGVT +RQ
Sbjct: 651 KAGDAGLKQSLFERLVVLGHVPIRLEVQYRMNPCLSEFSSNMFYDGSLQNGVTKEQRQLP 710
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
FPWPV + PM F+ G+EEIS SGTS+LNR EA N E+I+T R GV P QIGVI
Sbjct: 711 NSAFPWPVVDTPMMFWANFGREEISGSGTSFLNRIEAMNCERIITRLFRDGVQPEQIGVI 770
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPYEGQRAY+V YM NG++ + LY ++EVASVD+FQGREKD+IILSCVR+N+ Q IGFL
Sbjct: 771 TPYEGQRAYVVQYMQMNGSMDKDLYMDVEVASVDAFQGREKDFIILSCVRANDQQNIGFL 830
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
+DPRRLNVALTRA+YG+VILGNP+ LSK LWN LL HY+E CLVEG L++L+ S VQ
Sbjct: 831 SDPRRLNVALTRAKYGVVILGNPRALSKNQLWNQLLLHYREKGCLVEGLLDSLQLSSVQL 890
Query: 836 QKPKKIYNDRR 846
+P + R
Sbjct: 891 NRPNNRFKPNR 901
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 85/114 (74%), Gaps = 11/114 (9%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YCG+ N + VV+CN +C KWFCNS+ NTS SHI+ HLV +KH V LH DS LG
Sbjct: 98 EHACAYCGIHNSSSVVKCN--TCNKWFCNSKNNTSSSHIITHLVMSKHNVVSLHPDSDLG 155
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+T LECYNCG +NVF+LGF+SAK+E+V+V+LCR PC SQ KD+ RWD
Sbjct: 156 DTTLECYNCGNKNVFVLGFVSAKSETVIVILCRLPC------SQQKDS---RWD 200
>gi|255732109|ref|XP_002550978.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
gi|240131264|gb|EER30824.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
Length = 993
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/601 (59%), Positives = 444/601 (73%), Gaps = 10/601 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++ ++W +GLN + +A F E ++L++ GDE+ LRYSG + AW+
Sbjct: 278 LKESQALEHIQVKWALGLNNRHLASFTLSTFETSDLKVAVGDEIILRYSG-SLREAWEGH 336
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L QEE LEL S+ P D+ F+ +FVWK TS+DRMQ AMK FA DE S
Sbjct: 337 GYILRLPNAYQEEFTLELNTSKIAPPTDLTTDFTAEFVWKGTSYDRMQQAMKDFATDEKS 396
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS YIYH LLGHEVE LP+RF P L ELN SQ AV+SVLQRP+SLIQGPPGT
Sbjct: 397 VSSYIYHKLLGHEVEPVEFDIELPKRFSHPKLTELNISQTNAVRSVLQRPLSLIQGPPGT 456
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA I+YH++K + ++LVCAPSNVAVD LA K+ GLKVVRL A+SRE V S V
Sbjct: 457 GKTVTSATIIYHLSKLNREKILVCAPSNVAVDHLAAKLDLLGLKVVRLTARSREDVESSV 516
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
HL LH V ++ K EL KL +LK++ GELS D KY L R +E + DV+C
Sbjct: 517 SHLALHNLV---NSHAKGELKKLIKLKNQVGELSVEDTNKYIKLLRTSEMKALNKCDVVC 573
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGA D RL+ F+FR VLIDESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 574 CTCVGAADKRLSQFKFRSVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDRK 633
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERLV LG PIRL+VQYRMHP LSEFPSN FYEG+LQNGVT ++R
Sbjct: 634 AADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIED 693
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWPV + PM F+ G+EE+SASG SYLNR EA NVEKI+T + G+ P QIGVIT
Sbjct: 694 STFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIQPEQIGVIT 753
Query: 717 PYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAY+V +MS N L ++ Y ++E+ SVD+FQGREKDYIILSCVR+N+ Q IGF
Sbjct: 754 PYEGQRAYLVQFMSMNSTLLDKRDQYLDVEITSVDAFQGREKDYIILSCVRANDSQSIGF 813
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTR++YG++ILGNP+ L + LWN LL H++E CLV+GPL+NL+ SMVQ
Sbjct: 814 LSDPRRLNVALTRSKYGLIILGNPRALCRNRLWNHLLIHFREKGCLVDGPLDNLQLSMVQ 873
Query: 835 F 835
Sbjct: 874 L 874
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 86/114 (75%), Gaps = 11/114 (9%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EH+C YCG+ NP V++CN +C KWFCN++ ++S SHIV HL+ ++H +V LH++S LG
Sbjct: 80 EHSCAYCGIHNPCSVIKCN--TCNKWFCNAKTSSSSSHIVTHLIMSRHNQVSLHEESDLG 137
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+T LECYNCG +NVF+LGF+SAK ESVVV+LCR PC ++SKD I WD
Sbjct: 138 DTTLECYNCGNKNVFMLGFVSAKQESVVVILCRLPC------ARSKD---INWD 182
>gi|367000487|ref|XP_003684979.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
gi|357523276|emb|CCE62545.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
Length = 990
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/601 (59%), Positives = 450/601 (74%), Gaps = 9/601 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ ++++I W I LN + +A F E NEL++ GDE+ LRYSG HP W+
Sbjct: 270 LKESQALEHISIEWSIALNNRHMASFALSTFESNELKVAVGDEMILRYSG-MQHPEWEGR 328
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G+++ L + ++E +LEL+ S+ P + + GF+ +F+WK TS+DRMQ A+KTFAVD+ S
Sbjct: 329 GYIVHLPNSFKDEFSLELKPSKTPPPIHLGTGFTAEFIWKGTSYDRMQDALKTFAVDKKS 388
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGHEV +P+ P +LNASQ AV +VLQ+P+SLIQGPPGT
Sbjct: 389 ISGYLYYKILGHEVLDIAFDVPIPKELSIPHFAQLNASQASAVANVLQKPLSLIQGPPGT 448
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 449 GKTVTSATIVYHLSKSHKDRILVCAPSNVAVDHLATKLRDLGLKVVRLTAKSREDVESSV 508
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V + K EL KL +LK+E GELS+SD KK+ L R TE EI + ADV+C
Sbjct: 509 SNLALHNLVAR---AAKGELRKLLKLKEEVGELSASDTKKFVKLLRKTESEIMKKADVVC 565
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP++ GAKQV+LVGDH QLGPVI+ +K
Sbjct: 566 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIIKGAKQVILVGDHQQLGPVILERK 624
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R S
Sbjct: 625 AGDAGLKQSLFERLISLGHIPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVSA 684
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTSYLNR EA N E+I+T + GV P QIGVIT
Sbjct: 685 SSFPWPIHEIPMMFWANFGREEISANGTSYLNRIEAMNCERIITKLFKDGVKPEQIGVIT 744
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L ++LY +EVASVD+FQGREKDYIILSCVR+NE Q IGFL+
Sbjct: 745 PYEGQRAYILQYMQMNGSLDKELYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFLS 804
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ LS+ LWN LL H++E CLVEG L+NL+ V+
Sbjct: 805 DPRRLNVGLTRAKYGLVILGNPRSLSRNSLWNHLLIHFREKGCLVEGSLDNLQLCTVELT 864
Query: 837 K 837
+
Sbjct: 865 R 865
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 88/115 (76%), Gaps = 12/115 (10%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSR-GNTSGSHIVNHLVRAKHKEVCLHKDSPL 200
EHAC YCG+ +P VV+CN +C+KWFCNS+ G+ SGSHIVNHLV + H V LH DS L
Sbjct: 72 EHACGYCGIDSPTSVVKCN--TCKKWFCNSKNGSLSGSHIVNHLVLSHHNVVSLHPDSDL 129
Query: 201 GETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
G+T+LECYNCGC+N FLLGF+SAK+E+VVVLLCR PC +Q+K+ + WD
Sbjct: 130 GDTVLECYNCGCKNAFLLGFVSAKSEAVVVLLCRIPC------AQTKN---VNWD 175
>gi|326436499|gb|EGD82069.1| ATP-dependent helicase NAM7 [Salpingoeca sp. ATCC 50818]
Length = 1192
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/629 (57%), Positives = 465/629 (73%), Gaps = 32/629 (5%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KE Q D++T+ WD + ++ VA F P++D ++L+ GDELRL Y + + WQ+ G
Sbjct: 417 IKEEQRCDDITVHWDTNIKRQYVASFELPRQD--IKLLVGDELRLCYPF-SKNEVWQATG 473
Query: 301 HVIKL--TAQEEVALELRASQGVPVD-----------------------INHGFSVDFVW 335
V K+ T EEV L+L + P + +N G+ ++FVW
Sbjct: 474 TVKKVPDTRSEEVELQLDLRRPSPSERSRLRSRPRNGDETAAAMLTLETVNTGYYLEFVW 533
Query: 336 KSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQ 395
ST FDRMQ AM+ FAV+E ++S Y++H LGH++ + ++ +P+R APGLPELN SQ
Sbjct: 534 NSTVFDRMQSAMRRFAVNEAAMSDYLFHRFLGHQLNLPQLKFDMPKRLSAPGLPELNHSQ 593
Query: 396 VFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS 455
+ A+++VLQ+P+SLIQGPPGTGKTVTSA +VYH+ +Q +GQVLVCAPSN+AV+ LA++I
Sbjct: 594 LNAIRTVLQQPLSLIQGPPGTGKTVTSATLVYHLVQQ-RGQVLVCAPSNIAVEHLAQRIH 652
Query: 456 ATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEK 515
TG+KVVR+ AK+RE + L+LH QV + S S+ KL +LK E GELS +DE+
Sbjct: 653 LTGVKVVRVAAKTREQLEGDASFLSLHNQVENYTGS--SKFTKLTKLKKELGELSEADER 710
Query: 516 KYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDESTQATEPECLIPLVL 574
Y+ L + E + ADVICCTC G GD R+ + +R VL+DE+TQATEPE LIPLVL
Sbjct: 711 MYRRLYKKIEDIFLRKADVICCTCAGGGDRRIVAGKPYRTVLVDEATQATEPEILIPLVL 770
Query: 575 GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFP 634
GA QV+LVGDHCQLGPV+MCKKAA AGLA SLFERLV+ G++P+RLQVQYRMHP+LSEFP
Sbjct: 771 GANQVILVGDHCQLGPVVMCKKAANAGLAHSLFERLVVHGVRPVRLQVQYRMHPALSEFP 830
Query: 635 SNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAAN 694
SN+FYEG+LQNGVT ER+ +DFPWP P PM FY MG+EE++ASG+SYLNRTEAAN
Sbjct: 831 SNTFYEGSLQNGVTAAEREQPAVDFPWPNPEVPMLFYASMGREEMAASGSSYLNRTEAAN 890
Query: 695 VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGR 754
VEKIVT F+R+G+ P QIG+ITPYEGQRA+IV YM+ +GA R+ Y+ +EVASVDSFQGR
Sbjct: 891 VEKIVTRFMRAGITPDQIGIITPYEGQRAHIVQYMNFHGAARRSFYEALEVASVDSFQGR 950
Query: 755 EKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHY 814
EKDYIILSC RSN+HQGIGFLNDPRRLNVALTRA+YG++++GNP+ LSKQ LW+ LL H+
Sbjct: 951 EKDYIILSCTRSNDHQGIGFLNDPRRLNVALTRAKYGLILVGNPRALSKQALWHNLLLHF 1010
Query: 815 KEHECLVEGPLNNLKQSMVQFQKPKKIYN 843
KE LVEGPL+ L M+ KP+ + N
Sbjct: 1011 KEQGVLVEGPLDQLSPYMMHLSKPRPLAN 1039
Score = 153 bits (386), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 97/140 (69%), Gaps = 5/140 (3%)
Query: 139 DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDS 198
+ EHAC+YCG+ +P CVV+C S KWFCN RGNTSGSHI+NHLVR+K+ V LHKDS
Sbjct: 207 NLPEHACKYCGIHDPKCVVKC--ISTGKWFCNGRGNTSGSHIINHLVRSKNNAVMLHKDS 264
Query: 199 PLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGL 258
LG+++LECY CG RNVF LGFI A+ +S V+LLCR PC + + +++ D T +W +
Sbjct: 265 ALGDSVLECYTCGSRNVFNLGFIPARADSFVILLCRHPCAS-PQVAKNDDWDTTQWQPIV 323
Query: 259 NKKRVAYFV--FPKEDNELR 276
++ + ++ P ++R
Sbjct: 324 QERSLLKWIVKVPSHKEQMR 343
>gi|354544687|emb|CCE41413.1| hypothetical protein CPAR2_304020 [Candida parapsilosis]
Length = 1049
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/645 (56%), Positives = 459/645 (71%), Gaps = 32/645 (4%)
Query: 237 CLNMMKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPA 295
C +KESQ+ +++ ++W +GLN + +A F E +L++ GDE+ LRYSG A
Sbjct: 297 CDKNLKESQALEHIQVKWALGLNNRHLASFTLSTFETTDLKVAVGDEIILRYSGSQG-DA 355
Query: 296 WQSVGHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAV 352
WQ G++++L + QEE LEL S+ P + F+ +FVWK TS+DRMQ AMK FA+
Sbjct: 356 WQGQGYILRLPNSYQEEFTLELNPSKIAPPTHLTTDFTAEFVWKGTSYDRMQQAMKDFAI 415
Query: 353 DETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQG 412
D+ SVS +IYH LLGH+V LP+RF P L ELN SQ AV+SVLQRP+SLIQG
Sbjct: 416 DDESVSSFIYHKLLGHDVAPVEFDIELPKRFSHPKLTELNISQANAVRSVLQRPLSLIQG 475
Query: 413 PPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAV 472
PPGTGKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V
Sbjct: 476 PPGTGKTVTSATIVYHLSKLNKEKILVCAPSNVAVDHLAAKLDLLGLKVVRLTAKSREDV 535
Query: 473 SSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSA 532
S V HL LH V + + K EL KL +LK+E GELSS D KKY R++E +I
Sbjct: 536 ESSVGHLALHNIV---NKTSKGELKKLIKLKNEVGELSSEDSKKYIKHLRSSELKILNKC 592
Query: 533 DVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVI 592
DV+CCTCVGA D RL+ F+FR VL+DESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI
Sbjct: 593 DVVCCTCVGAADKRLSQFKFRTVLVDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVI 652
Query: 593 MCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
+ +KAA AGL QSLFERLV LG PIRL+VQYRMHP LSEFPSN FYEG+LQ+GVT +R
Sbjct: 653 LDRKAADAGLKQSLFERLVFLGHIPIRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADR 712
Query: 653 QSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQI 712
+ FPWPV + PM F+ G+EE+S+SG SYLNR EA NVE+I+T + G+ P QI
Sbjct: 713 LVADSSFPWPVVDTPMMFWANYGREELSSSGNSYLNRVEAMNVERIITRLFKDGIKPEQI 772
Query: 713 GVITPYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
GVITPYEGQRAY+V +MS N L ++ Y E+E+ SVD+FQGREKD+IILSCVR+N+ Q
Sbjct: 773 GVITPYEGQRAYLVQFMSMNSTLLSKRDEYLEVEITSVDAFQGREKDFIILSCVRANDSQ 832
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
IGFL+DPRRLNVALTRA+YG+++LGNP+ LS+ LWN LL H++E CLV+GPL+NL+
Sbjct: 833 SIGFLSDPRRLNVALTRAKYGLLVLGNPRALSRNRLWNHLLVHFREKGCLVDGPLDNLQL 892
Query: 831 SMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRAR 875
SMVQ N+ +T+N N + RG A+
Sbjct: 893 SMVQL----------------------NNYTTANRNLNNRGGGAQ 915
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 85/114 (74%), Gaps = 11/114 (9%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YCGV P V++CN +C KWFCNS+ N++ SHIV HLV ++H +V LH++S LG
Sbjct: 103 EHACAYCGVHTPNSVIKCN--TCNKWFCNSKSNSNSSHIVTHLVMSRHNQVSLHEESDLG 160
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+T LECYNCG +NVF+LGF+SAK ESVVV+LCR PC ++SKD I WD
Sbjct: 161 DTTLECYNCGNKNVFMLGFVSAKQESVVVILCRLPC------ARSKD---INWD 205
>gi|333038075|gb|AEF13567.1| hypothetical protein PICST_73544 [Scheffersomyces stipitis CBS
6054]
Length = 1021
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/601 (60%), Positives = 445/601 (74%), Gaps = 10/601 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++ ++W +GLN + + F E N+L++ GDE+ LRY+G A W+
Sbjct: 282 LKESQALEHIQVKWALGLNNRHLTSFTLSTYESNDLKVAVGDEIILRYTG-AHDEKWEGR 340
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G +++L QEE LEL A++ P ++ F+ +FVWK TS++RMQ AMK FAVDE S
Sbjct: 341 GFIVRLPNAHQEEFTLELNAAKTAPPTHLSTDFTAEFVWKGTSYERMQDAMKLFAVDEES 400
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VSGYIYH LLGHEVE LP+RF P L ELN SQ+ AV+SVLQRP+SLIQGPPGT
Sbjct: 401 VSGYIYHKLLGHEVEPVEFDVKLPQRFSHPNLTELNVSQINAVRSVLQRPLSLIQGPPGT 460
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA I+YH+ K + ++LVCAPSNVAVD LAEK+ + GLKV+RL A+SRE V S V
Sbjct: 461 GKTVTSATIIYHLTKLNKEKILVCAPSNVAVDHLAEKLDSLGLKVLRLTARSREDVESSV 520
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
HL+LH V + + K EL KL +L++E GELS SD K L R +E +I DV+C
Sbjct: 521 SHLSLHNLV---NRTAKGELKKLLRLRNELGELSLSDSKSLIRLIRTSESKILAQCDVVC 577
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGA D RL+N +FR VLIDESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ KK
Sbjct: 578 CTCVGAADRRLSNIKFRTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKK 637
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERLV+LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVT +R+
Sbjct: 638 AGDAGLRQSLFERLVILGHVPIRLEVQYRMNPCLSEFPSNIFYEGSLQNGVTSAQRRIES 697
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWPV + PM F+ G+EEIS SG SYLNR EA NVEKI+T + GV QIGVIT
Sbjct: 698 STFPWPVYDSPMMFWANYGREEISGSGNSYLNRVEAMNVEKIITRLFKDGVKAEQIGVIT 757
Query: 717 PYEGQRAYIVNYMSRNGALRQ--QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAY+V+YMS N L + + Y E+EV SVD+FQGREKDYIILSCVR+N IGF
Sbjct: 758 PYEGQRAYLVSYMSINSTLAEFKEQYLEVEVTSVDAFQGREKDYIILSCVRANSSHQIGF 817
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+V+LGNP+ L + LWN LL H++E CLV+GPL+NL+ SMVQ
Sbjct: 818 LSDPRRLNVALTRAKYGLVVLGNPRALCRNRLWNQLLIHFREKGCLVDGPLDNLQLSMVQ 877
Query: 835 F 835
Sbjct: 878 L 878
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 93/140 (66%), Gaps = 18/140 (12%)
Query: 123 FEETGDD-------VEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 175
EE DD ++ EY + EHAC YCGV + VV+CN +C KWFCNS+ N
Sbjct: 58 LEELIDDADDAQLALDAAEYSHTNLPEHACAYCGVHSTHSVVKCN--TCNKWFCNSKSNG 115
Query: 176 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
+ SHIV HLV ++H +V LH+DS LG+T LECYNCG +NVF+LGF+SAK ESVVV+LCR
Sbjct: 116 NSSHIVTHLVMSRHNQVSLHEDSDLGDTTLECYNCGNKNVFILGFVSAKQESVVVILCRL 175
Query: 236 PCLNMMKESQSKDNVTIRWD 255
PC +QSKD + WD
Sbjct: 176 PC------AQSKD---VNWD 186
>gi|410074371|ref|XP_003954768.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
gi|372461350|emb|CCF55633.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
Length = 995
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/603 (59%), Positives = 447/603 (74%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 268 LKESQALEHISVTWSLALNNRHLASFSLSTFESNELKVAVGDEMILWYSG-LNHPDWEGR 326
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + + GF+ +F+WK TS+DRMQ A+K FAVD+ S
Sbjct: 327 GYIVRLPNSFQDTFTLELKPSKTPPPIHLTSGFTAEFIWKGTSYDRMQDALKKFAVDKKS 386
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGHEV LP+ P +LN SQ AVK VLQRP+SLIQGPPGT
Sbjct: 387 ISGYLYYKILGHEVVDISFDVPLPKEMSIPQFTKLNDSQSNAVKKVLQRPLSLIQGPPGT 446
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 447 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 506
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH V S + EL KL ++KDE GELS++D K++ L R E EI ADV+C
Sbjct: 507 SSLALHNLVAR---SSQGELKKLLKMKDEIGELSAADTKRFVKLVRKAESEILAKADVVC 563
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 564 CTCVGAGDKRL-DAKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 622
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P+LSEFPSN FYEG+LQNGVTI +R S
Sbjct: 623 AADAGLRQSLFERLISLGHVPIRLEVQYRMNPNLSEFPSNMFYEGSLQNGVTIEQRTVSN 682
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTSYLNR EA N E+I+T + GV P QIGVIT
Sbjct: 683 STFPWPIHGVPMMFWANYGREEISANGTSYLNRIEAMNCERIITRLFKDGVKPEQIGVIT 742
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 743 PYEGQRAYILQYMQMNGVLDKNLYVKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 802
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG++ILGNP+ LS+ LWN LL H++E CLVEGPL+NL+ S VQ
Sbjct: 803 DPRRLNVGLTRAKYGLIILGNPRSLSRNLLWNHLLIHFREKGCLVEGPLDNLQLSTVQLT 862
Query: 837 KPK 839
KP+
Sbjct: 863 KPQ 865
Score = 153 bits (386), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YCG+ +P CV++CN SC KWFCNS+ T+ SHIVNHLV + H V LH +S LG
Sbjct: 71 EHACAYCGIDSPTCVIKCN--SCNKWFCNSKNGTNSSHIVNHLVLSHHNVVSLHPESDLG 128
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 129 DTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRTPC 164
>gi|294657547|ref|XP_002770466.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
gi|199432775|emb|CAR65809.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
Length = 985
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/605 (59%), Positives = 445/605 (73%), Gaps = 10/605 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ ++++++W +GLN K +A F E NEL++ GDE+ LRYSG P WQ
Sbjct: 280 LKESQALEHISVKWALGLNNKHLASFTLSTFESNELKVAVGDEIILRYSGLNQEP-WQGN 338
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L QEE LEL S+ P + F+ +FVWK TS++RMQ AMK FA ++ S
Sbjct: 339 GYIVRLPNAYQEEFTLELNPSKLQPPTHLATDFTAEFVWKGTSYERMQQAMKDFATEKES 398
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS YIYH +LGHEV LP +F P L ELN SQ AV+SVLQRP+SLIQGPPGT
Sbjct: 399 VSSYIYHKILGHEVAPIEFDIKLPNKFSHPNLTELNMSQTNAVRSVLQRPLSLIQGPPGT 458
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA+K++ GLKV+RL AKSRE V S V
Sbjct: 459 GKTVTSATIVYHLSKLSKEKILVCAPSNVAVDHLADKLNLLGLKVIRLTAKSREDVESSV 518
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH V + S K EL KL +L++E GELS SD ++ L R++E +I DV+C
Sbjct: 519 NDLALHNIV---NKSAKGELKKLIRLRNELGELSESDSRQLIKLTRSSEMKILNKCDVVC 575
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL+N +FR VLIDESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ KK
Sbjct: 576 CTCVGAGDKRLSNLKFRTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKK 635
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERLV+LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVT +R
Sbjct: 636 AGDAGLKQSLFERLVVLGHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTAKQRLIEN 695
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWPV + PM F+ G+EEIS SG S+LNR EA NVEKI+T + G+ PSQIGVIT
Sbjct: 696 SIFPWPVLDNPMMFWANYGREEISGSGNSFLNRVEAMNVEKIITKLFKDGIEPSQIGVIT 755
Query: 717 PYEGQRAYIVNYMSRNGALRQ--QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAYIV YMS N L + + Y E+E+ SVD+FQGREKD+IILSCVR+N+ Q IGF
Sbjct: 756 PYEGQRAYIVQYMSMNSTLTELKEKYLEVEITSVDAFQGREKDFIILSCVRANDSQVIGF 815
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNP+ L + LWN LL H++E CLV+G L+NL+ SMVQ
Sbjct: 816 LSDPRRLNVALTRAKYGLVILGNPRALCRNTLWNHLLIHFREKGCLVDGSLDNLQLSMVQ 875
Query: 835 FQKPK 839
K
Sbjct: 876 LNNLK 880
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 85/114 (74%), Gaps = 11/114 (9%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YCGV CVV+CN +C KWFCNS+ N++GSHIV HLV ++H V LH+DS LG
Sbjct: 82 EHACAYCGVHTTNCVVKCN--TCSKWFCNSKSNSNGSHIVTHLVLSRHNVVSLHEDSDLG 139
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+T LECYNCG +NVF+LGF+SAK ESVVV+LCR PC +QSKD I WD
Sbjct: 140 DTTLECYNCGNKNVFILGFVSAKQESVVVILCRLPC------AQSKD---INWD 184
>gi|344301641|gb|EGW31946.1| ATP-dependent helicase NAM7 [Spathaspora passalidarum NRRL Y-27907]
Length = 1000
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/601 (58%), Positives = 443/601 (73%), Gaps = 10/601 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++ ++W +GLN + +A F E+++L++ GDE+ LRYSG P W+
Sbjct: 288 IKESQALEHIQVKWALGLNNRHLASFTLSTYENSDLKVAVGDEIILRYSGFQREP-WEGN 346
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L QEE LEL S+ P D+ F+ +FVWK TS+DRMQ AMK FA DETS
Sbjct: 347 GYILRLPNKNQEEFTLELNPSKVTPPTDLTTDFTAEFVWKGTSYDRMQQAMKDFATDETS 406
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS YIYH LLGHEV LP+RF P L ELN SQ AV++VLQRP+SLIQGPPGT
Sbjct: 407 VSSYIYHKLLGHEVVPIEFDTELPQRFSHPALTELNVSQTNAVRTVLQRPLSLIQGPPGT 466
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA I+YH++K + ++LVCAPSNVAVD LAEK+ GLKVVRL AKSRE V S V
Sbjct: 467 GKTVTSATIIYHLSKLNKEKILVCAPSNVAVDHLAEKLDLLGLKVVRLTAKSREDVDSSV 526
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
HL LH V + K E KL +LK+E GELS D + Y R +E ++ D++C
Sbjct: 527 SHLALHNLV---NKGAKGEFKKLIKLKNEVGELSVEDSRIYFRNLRNSESKLLDKCDIVC 583
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGA D RL+ F+FR VLIDESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 584 CTCVGAADKRLSQFKFRTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDRK 643
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERLV LG PIRL+VQYRMHP LS+FPSN FYEG+LQNGVT ++R
Sbjct: 644 AADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSDFPSNMFYEGSLQNGVTSDDRLIED 703
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ + PM F+ G+EE+S+SG S+LNR EA NVEKI+T + GV P QIGVIT
Sbjct: 704 ATFPWPMVDTPMMFWANYGREELSSSGNSFLNRVEAMNVEKIITRLFKDGVTPDQIGVIT 763
Query: 717 PYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAY+V +MS N L ++ Y ++E+ SVD+FQGREKD+IILSCVR+N+ Q IGF
Sbjct: 764 PYEGQRAYLVQFMSMNSTLLDKRDQYLDVEITSVDAFQGREKDFIILSCVRANDAQSIGF 823
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+++LGNP+ L + LWN LL H++E CLV+GPL+NL+ SMVQ
Sbjct: 824 LSDPRRLNVALTRAKYGLIVLGNPRALCRNRLWNCLLVHFREKGCLVDGPLDNLQLSMVQ 883
Query: 835 F 835
Sbjct: 884 L 884
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 90/126 (71%), Gaps = 11/126 (8%)
Query: 130 VEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 189
VE ++ + EHAC YCG+ P+ VV+CN +C KWFCN++ ++S SHI+ HLV ++H
Sbjct: 77 VEDLDHAHDEEHEHACSYCGIHTPSSVVKCN--TCNKWFCNAKTDSSSSHIITHLVMSRH 134
Query: 190 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDN 249
+V LH+DS LG+T LECYNCG +NVF+LGF+SAK ESVVV+LCR PC N SKD
Sbjct: 135 NQVSLHEDSDLGDTTLECYNCGNKNVFMLGFVSAKQESVVVILCRLPCAN------SKD- 187
Query: 250 VTIRWD 255
I WD
Sbjct: 188 --INWD 191
>gi|238882462|gb|EEQ46100.1| ATP-dependent helicase NAM7 [Candida albicans WO-1]
Length = 1019
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/601 (59%), Positives = 445/601 (74%), Gaps = 10/601 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++ ++W +GLN + +A F E ++L++ GDE+ LRYSG+ P W+
Sbjct: 288 LKESQALEHIQVKWALGLNNRHLASFTLSTFETSDLKVAVGDEIILRYSGNQGEP-WEGH 346
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L QEE LEL S+ +P + F+ +FVWK TS+DRMQ AMK FA DE S
Sbjct: 347 GYILRLPNAYQEEFTLELNPSKIIPPTQLTTDFTAEFVWKGTSYDRMQQAMKDFATDEES 406
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS +IYH LLGHEV LP++F P L ELN SQ AV++VLQRP+SLIQGPPGT
Sbjct: 407 VSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELNVSQTNAVRTVLQRPLSLIQGPPGT 466
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA I+YH++K + ++LVCAPSNVAVD LA K+ GL VVRL AKSRE V S V
Sbjct: 467 GKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLDLLGLNVVRLTAKSREDVESSV 526
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
HL LH V +++ K EL KL +LK++ GELS +D Y L R++E ++ A+V+C
Sbjct: 527 SHLALHNLV---NSNAKGELKKLIKLKNQVGELSVADTNNYLKLSRSSEMKVLNKAEVVC 583
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGA D RL+ FRF+ VLIDESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ KK
Sbjct: 584 CTCVGAADRRLSQFRFKTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKK 643
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERLV LG PIRL+VQYRMHP LSEFPSN FYEG+LQNGVT ++R
Sbjct: 644 AADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEE 703
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWPV + PM F+ G+EE+SASG SYLNR EA NVEKI+T + G+ P QIGVIT
Sbjct: 704 STFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQIGVIT 763
Query: 717 PYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAY+V +MS N L ++ Y +E+ SVD+FQGREKD+IILSCVR+N+ Q IGF
Sbjct: 764 PYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGF 823
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNP+ L + LWN LL H++E CLV+GPL+NL+ SMVQ
Sbjct: 824 LSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFREKGCLVDGPLDNLQLSMVQ 883
Query: 835 F 835
Sbjct: 884 L 884
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 86/114 (75%), Gaps = 11/114 (9%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YCG+ NP V++CN +C KWFCN++ N+S SHIV HL+ ++H +V LH++S LG
Sbjct: 90 EHACAYCGIHNPNSVIKCN--TCNKWFCNAKTNSSSSHIVTHLIMSRHNQVSLHEESELG 147
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+T LECYNCG +NVF+LGF+SAK ESVVV+LCR PC ++SKD + WD
Sbjct: 148 DTTLECYNCGNKNVFILGFVSAKQESVVVILCRLPC------ARSKD---VNWD 192
>gi|68478193|ref|XP_716838.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
gi|68478314|ref|XP_716778.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438523|gb|EAK97852.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
Length = 1019
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/601 (59%), Positives = 445/601 (74%), Gaps = 10/601 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++ ++W +GLN + +A F E ++L++ GDE+ LRYSG+ P W+
Sbjct: 288 LKESQALEHIQVKWALGLNNRHLASFTLSTFETSDLKVAVGDEIILRYSGNQGEP-WEGH 346
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L QEE LEL S+ +P + F+ +FVWK TS+DRMQ AMK FA DE S
Sbjct: 347 GYILRLPNAYQEEFTLELNPSKIIPPTQLTTDFTAEFVWKGTSYDRMQQAMKDFATDEES 406
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS +IYH LLGHEV LP++F P L ELN SQ AV++VLQRP+SLIQGPPGT
Sbjct: 407 VSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELNVSQTNAVRTVLQRPLSLIQGPPGT 466
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA I+YH++K + ++LVCAPSNVAVD LA K+ GL VVRL AKSRE V S V
Sbjct: 467 GKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLDLLGLNVVRLTAKSREDVESSV 526
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
HL LH V +++ K EL KL +LK++ GELS +D Y L R++E ++ A+V+C
Sbjct: 527 SHLALHNLV---NSNAKGELKKLIKLKNQVGELSVADTNNYLKLSRSSEMKVLNKAEVVC 583
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGA D RL+ FRF+ VLIDESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ KK
Sbjct: 584 CTCVGAADRRLSQFRFKTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKK 643
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERLV LG PIRL+VQYRMHP LSEFPSN FYEG+LQNGVT ++R
Sbjct: 644 AADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEE 703
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWPV + PM F+ G+EE+SASG SYLNR EA NVEKI+T + G+ P QIGVIT
Sbjct: 704 STFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQIGVIT 763
Query: 717 PYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAY+V +MS N L ++ Y +E+ SVD+FQGREKD+IILSCVR+N+ Q IGF
Sbjct: 764 PYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGF 823
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNP+ L + LWN LL H++E CLV+GPL+NL+ SMVQ
Sbjct: 824 LSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFREKGCLVDGPLDNLQLSMVQ 883
Query: 835 F 835
Sbjct: 884 L 884
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 86/114 (75%), Gaps = 11/114 (9%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YCG+ NP V++CN +C KWFCN++ N+S SHIV HL+ ++H +V LH++S LG
Sbjct: 90 EHACAYCGIHNPNSVIKCN--TCNKWFCNAKTNSSSSHIVTHLIMSRHNQVSLHEESELG 147
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+T LECYNCG +NVF+LGF+SAK ESVVV+LCR PC ++SKD + WD
Sbjct: 148 DTTLECYNCGNKNVFILGFVSAKQESVVVILCRLPC------ARSKD---VNWD 192
>gi|366987891|ref|XP_003673712.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
gi|342299575|emb|CCC67331.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
Length = 992
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/603 (59%), Positives = 448/603 (74%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 266 LKESQALEHISVTWSLALNNRHLASFALSTFESNELKVAVGDEMILWYSG-VQHPDWEGR 324
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P ++ GF+ +F+WK TS+DRMQ ++K FA+D+ S
Sbjct: 325 GYIVRLPNSFQDTFTLELKPSKVPPPTNLTTGFTAEFIWKGTSYDRMQDSLKKFAIDKKS 384
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V +P++F P +LN SQ AV+ VLQRP+SLIQGPPGT
Sbjct: 385 ISGYLYYKILGHQVVDITFDVPMPKQFSIPHFTQLNDSQSNAVQHVLQRPLSLIQGPPGT 444
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + +VLVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 445 GKTVTSATIVYHLSKIHKERVLVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 504
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V S K EL KL LK+E GELS+SD KK+ L R TE EI ADV+C
Sbjct: 505 SNLALHNLVAR---SSKGELRKLLTLKEEVGELSASDTKKFVKLVRRTEAEILAKADVVC 561
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQATEPECLIP++ GAKQV+LVGDH QLGPVI+ +K
Sbjct: 562 CTCVGAGDKRL-DTKFRTVLIDESTQATEPECLIPIIKGAKQVILVGDHQQLGPVILERK 620
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 621 AGDAGLKQSLFERLISLGHIPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 680
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ + PM F+ G+EE+S++GTSYLNR EA N E+I+T R GV P QIGVIT
Sbjct: 681 STFPWPIHDVPMMFWANYGREELSSNGTSYLNRIEAMNCERIITKLFRDGVKPEQIGVIT 740
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L +++Y ++EVASVD+FQGREKDYIILSCVR+N+ Q IGFL
Sbjct: 741 PYEGQRAYILQYMQMNGSLDKEMYVKVEVASVDAFQGREKDYIILSCVRANDQQAIGFLR 800
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ LSK LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 801 DPRRLNVGLTRAKYGLVILGNPRSLSKNILWNHLLLHFREKGCLVEGTLDNLQLCTVQLT 860
Query: 837 KPK 839
+PK
Sbjct: 861 RPK 863
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 87/114 (76%), Gaps = 11/114 (9%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YCGV +P CV++CN SC KWFCNS+ T+ SHIVNHLV + H V LH DS LG
Sbjct: 69 EHACAYCGVDSPTCVIKCN--SCNKWFCNSKNGTNSSHIVNHLVLSHHNVVSLHPDSDLG 126
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+TILECYNCGC+NVFLLGF+SAK+E+VVVLLCR PC +Q+K+ + WD
Sbjct: 127 DTILECYNCGCKNVFLLGFVSAKSEAVVVLLCRMPC------AQTKN---VNWD 171
>gi|367008616|ref|XP_003678809.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
gi|359746466|emb|CCE89598.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
Length = 908
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/613 (58%), Positives = 451/613 (73%), Gaps = 11/613 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ LRYSG HP W+
Sbjct: 221 LKESQALEHISVTWSLALNNRHLASFALSTFESNELKVAVGDEMVLRYSG-LQHPEWEGR 279
Query: 300 GHVIKL--TAQEEVALELRAS-QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+E LEL+ S Q P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 280 GYIVRLPNSMQDEFTLELKPSKQPPPTHLGTGFTAEFIWKGTSYDRMQDALKKFALDKKS 339
Query: 357 VSGYIYHHLLGHE-VEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPG 415
+SG++Y+ +LGH+ V++Q N LP+ F +LNASQ AV+ VLQRP+SLIQGPPG
Sbjct: 340 ISGFLYYKILGHQIVDIQFEVN-LPKEFSIKHFAQLNASQSHAVEHVLQRPLSLIQGPPG 398
Query: 416 TGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSP 475
TGKTVTSA IVYH++K ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S
Sbjct: 399 TGKTVTSATIVYHLSKMHNERILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESS 458
Query: 476 VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVI 535
V +L LH V S K EL KL +LK+E GELS D KK+ L R TE EI + ADV+
Sbjct: 459 VSNLALHNLVAR---SSKGELKKLLRLKEEVGELSIGDTKKFVKLVRKTESEILKKADVV 515
Query: 536 CCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
CCTCVGAGD RL + RFR VLIDESTQA+EPECLIP+V GAKQ++LVGDH QLGPVI+ +
Sbjct: 516 CCTCVGAGDKRL-DTRFRTVLIDESTQASEPECLIPIVKGAKQIILVGDHQQLGPVILER 574
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
KA AGL QSLFERL+ LG P+RL+VQYRM+P LS+FPSN FYEG+LQNGVTI +R +
Sbjct: 575 KAGDAGLKQSLFERLIALGHVPLRLEVQYRMNPYLSDFPSNVFYEGSLQNGVTIEQRTVT 634
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
FPWP+ PM F+ G+EEISA+GTSYLNR EA N E+I+T + GV P QIGVI
Sbjct: 635 NSTFPWPIHGVPMMFWANYGREEISANGTSYLNRIEAMNCERIITRLFKDGVKPEQIGVI 694
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPYEGQRA+I+ YM NG+L + LY +EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 695 TPYEGQRAFILQYMQMNGSLDRDLYLSVEVASVDAFQGREKDYIILSCVRANEQQIIGFL 754
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
+DPRRLNV LTRA+YG+VILGNP+ LS LWN LL H++E CLVEG LNNL+ VQ
Sbjct: 755 SDPRRLNVGLTRAKYGLVILGNPRALSTNALWNNLLIHFREKGCLVEGSLNNLQLCTVQL 814
Query: 836 QKPKKIYNDRRLF 848
+ + N+ F
Sbjct: 815 TRNRPNKNNTNKF 827
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 77/97 (79%), Gaps = 2/97 (2%)
Query: 141 TEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPL 200
++HAC YCG+ +P V+RCN C +WFCNS+ T+ SHIVNHLV + H V LH DS L
Sbjct: 23 SQHACAYCGIDSPVSVIRCN--GCSRWFCNSKHGTASSHIVNHLVLSHHNVVSLHPDSDL 80
Query: 201 GETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
G+T+LECYNCGC+NVFLLGF+SA+ E+VVVLLCR PC
Sbjct: 81 GDTVLECYNCGCKNVFLLGFVSARGEAVVVLLCRVPC 117
>gi|241955273|ref|XP_002420357.1| ATP-dependent RNA helicase, putative; atp-dependent helicase, SFI
superfamily, putative [Candida dubliniensis CD36]
gi|223643699|emb|CAX41433.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1016
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/601 (58%), Positives = 444/601 (73%), Gaps = 10/601 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++ ++W +GLN + +A F E ++L++ GDE+ LRYSG+ P W+
Sbjct: 290 LKESQALEHIQVKWALGLNNRHLASFTLSTFETSDLKVAVGDEIILRYSGNQGEP-WEGH 348
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L QEE LEL S+ +P ++ F+ +FVWK TS+ RMQ AMK FA DE S
Sbjct: 349 GYILRLPNAYQEEFTLELNPSKIIPPTNLTTDFTAEFVWKGTSYTRMQQAMKDFATDEES 408
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS +IYH LLGHEV LP++F P L ELN SQ AV++VLQRP+SLIQGPPGT
Sbjct: 409 VSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELNVSQTNAVRTVLQRPLSLIQGPPGT 468
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA I+YH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 469 GKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLDLLGLKVVRLTAKSREDVESSV 528
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
HL LH V + + K EL KL +LK++ GELS D Y L R++E +I ++V+C
Sbjct: 529 SHLALHNLV---NNNAKGELKKLIKLKNQVGELSVGDTNNYLKLSRSSELKILNKSEVVC 585
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGA D RL+ F+F+ VLIDESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ KK
Sbjct: 586 CTCVGAADRRLSQFKFKTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKK 645
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERLV LG PIRL+VQYRMHP LSEFPSN FYEG+LQNGVT ++R
Sbjct: 646 AADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEE 705
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWPV + PM F+ G+EE+SASG SYLNR EA NVEKI+T + G+ P QIGVIT
Sbjct: 706 STFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQIGVIT 765
Query: 717 PYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAY+V +MS N L ++ Y +E+ SVD+FQGREKD+IILSCVR+N+ Q IGF
Sbjct: 766 PYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGF 825
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+VILGNP+ L + LWN LL H++E CLV+GPL+NL+ SMVQ
Sbjct: 826 LSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFREKGCLVDGPLDNLQLSMVQ 885
Query: 835 F 835
Sbjct: 886 L 886
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 86/114 (75%), Gaps = 11/114 (9%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YCG+ NP V++CN +C KWFCN++ N+S SHIV HL+ ++H +V LH++S LG
Sbjct: 92 EHACAYCGIHNPNSVIKCN--TCNKWFCNAKTNSSSSHIVTHLIMSRHNQVSLHEESELG 149
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+T LECYNCG +NVF+LGF+SAK ESVVV+LCR PC ++SKD + WD
Sbjct: 150 DTTLECYNCGNKNVFILGFVSAKQESVVVILCRLPC------ARSKD---VNWD 194
>gi|349580361|dbj|GAA25521.1| K7_Nam7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 971
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/603 (59%), Positives = 444/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEE GF A ++++C YCG+ + CV++CN SC+KWFCN++ TS SHIVN
Sbjct: 42 FEEAQVTETGFRSASA--SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIVN 97
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 98 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 153
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 154 QTKNANWDTDQWQPLIEDRQLLSWVAEQPSEEEKLK 189
>gi|151946238|gb|EDN64469.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
YJM789]
Length = 971
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/603 (59%), Positives = 444/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEE GF A ++++C YCG+ + CV++CN SC+KWFCN++ TS SHIVN
Sbjct: 42 FEEAQVTETGFRSASA--SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIVN 97
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 98 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 153
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 154 QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 189
>gi|6323726|ref|NP_013797.1| ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae S288c]
gi|400350|sp|P30771.1|NAM7_YEAST RecName: Full=ATP-dependent helicase NAM7; AltName:
Full=Nonsense-mediated mRNA decay protein 1; AltName:
Full=Nuclear accommodation of mitochondria 7 protein;
AltName: Full=Up-frameshift suppressor 1
gi|4023|emb|CAA44266.1| helicase [Saccharomyces cerevisiae]
gi|173142|gb|AAA35197.1| zinc finger protein [Saccharomyces cerevisiae]
gi|807962|emb|CAA89226.1| Nam7p [Saccharomyces cerevisiae]
gi|207342353|gb|EDZ70140.1| YMR080Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148654|emb|CAY81899.1| Nam7p [Saccharomyces cerevisiae EC1118]
gi|285814083|tpg|DAA09978.1| TPA: ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae
S288c]
gi|323353063|gb|EGA85363.1| Nam7p [Saccharomyces cerevisiae VL3]
gi|392297240|gb|EIW08340.1| Nam7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 971
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/603 (59%), Positives = 444/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEE GF A ++++C YCG+ + CV++CN SC+KWFCN++ TS SHIVN
Sbjct: 42 FEEAQVTETGFRSPSA--SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIVN 97
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 98 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 153
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 154 QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 189
>gi|256273504|gb|EEU08438.1| Nam7p [Saccharomyces cerevisiae JAY291]
Length = 971
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/603 (59%), Positives = 444/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 18/161 (11%)
Query: 128 DDVEGFEYGKADFTE----------HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSG 177
DDV+ + +A TE ++C YCG+ + CV++CN SC+KWFCN++ TS
Sbjct: 35 DDVDNQLFEEAQVTETGFRSPSASNNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSS 92
Query: 178 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
SHIVNHLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 93 SHIVNHLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC 152
Query: 238 LNMMKESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 153 ----AQTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 189
>gi|190408311|gb|EDV11576.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 971
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/603 (59%), Positives = 444/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEE GF A ++++C YCG+ + CV++CN SC+KWFCN++ TS SHIVN
Sbjct: 42 FEEAQVTETGFRSPSA--SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIVN 97
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 98 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 153
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 154 QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 189
>gi|448531806|ref|XP_003870332.1| Nam7 protein [Candida orthopsilosis Co 90-125]
gi|380354686|emb|CCG24202.1| Nam7 protein [Candida orthopsilosis]
Length = 1014
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/601 (58%), Positives = 444/601 (73%), Gaps = 10/601 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++ ++W +GLN + +A F E +L++ GDE+ LRYSG AWQ
Sbjct: 284 LKESQALEHIQVKWALGLNNRHLASFTLSTFETTDLKVAVGDEIILRYSGSQG-DAWQGQ 342
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G +++L + QEE LEL S+ P + F+ +FVWK TS+DRMQ AMK FA ++ S
Sbjct: 343 GFILRLPNSYQEEFTLELNPSKVAPPTHLTTDFTAEFVWKGTSYDRMQQAMKDFATNDDS 402
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS +IYH LLGH+V LP+RF P L ELN SQ AV+SVLQRP+SLIQGPPGT
Sbjct: 403 VSSFIYHKLLGHDVAPVEFDIELPKRFSHPKLTELNVSQANAVRSVLQRPLSLIQGPPGT 462
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH+++ + ++LVCAPSNVAVD LA K+ + GL VVRL AKSRE V S V
Sbjct: 463 GKTVTSATIVYHLSRLNKEKILVCAPSNVAVDHLAAKLDSLGLNVVRLTAKSREDVESSV 522
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
HL LH V + + K EL KL +LK+E GELS+ D KKY R++E +I DV+C
Sbjct: 523 SHLALHNIV---NKTAKGELKKLIKLKNEVGELSAEDSKKYIKHLRSSELKILNKCDVVC 579
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGA D RL+ F+FR VL+DESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 580 CTCVGAADKRLSQFKFRTVLVDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDRK 639
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERLV LG PIRL+VQYRMHP LSEFPSN FYEG+LQ+GVT +R +
Sbjct: 640 AADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADRVVAD 699
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWPV + PM F+ G+EE+S+SG SYLNR EA NVE+I+T + G+ P QIGVIT
Sbjct: 700 SSFPWPVIDTPMMFWANYGREELSSSGNSYLNRVEAMNVERIITRLFKDGIKPEQIGVIT 759
Query: 717 PYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAY+V +MS N L ++ Y E+E+ SVD+FQGREKD+IILSCVR+N+ Q IGF
Sbjct: 760 PYEGQRAYLVQFMSMNSTLLNKRDEYLEVEITSVDAFQGREKDFIILSCVRANDTQSIGF 819
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG+++LGNP+ LS+ LWN LL H++E CLV+GPL+NL+ SMVQ
Sbjct: 820 LSDPRRLNVALTRAKYGLLVLGNPRALSRNRLWNHLLVHFREKGCLVDGPLDNLQLSMVQ 879
Query: 835 F 835
Sbjct: 880 L 880
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 85/114 (74%), Gaps = 11/114 (9%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YCGV P V++CN +C KWFCNS+ N++ SHIV HLV ++H +V LH++S LG
Sbjct: 86 EHACAYCGVHTPNSVIKCN--TCNKWFCNSKANSTSSHIVTHLVMSRHNQVSLHEESDLG 143
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
ET LECYNCG +NVF+LGF+SAK ESVVV+LCR PC ++SKD I WD
Sbjct: 144 ETTLECYNCGNKNVFMLGFVSAKQESVVVILCRLPC------ARSKD---INWD 188
>gi|124802033|ref|XP_001347342.1| regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
gi|23494920|gb|AAN35255.1|AE014829_55 regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
Length = 1554
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/636 (56%), Positives = 456/636 (71%), Gaps = 38/636 (5%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KE Q + NV++RWDIGLNKKR A+F++ KE++ELRLV GDEL++ Y+ W G
Sbjct: 621 IKEGQKQGNVSVRWDIGLNKKRYAHFIYIKEESELRLVAGDELKISYTYPDG-SVWCCEG 679
Query: 301 HVIKLTAQEEVALELRAS---QGVPVD-INHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
H+ +L EE++LELR S G VD I GF+V+F+WKST++DRMQ A+ FA++ S
Sbjct: 680 HISRLHNTEEISLELRTSCTSNGPWVDNITTGFTVEFIWKSTAYDRMQLALNEFALNSYS 739
Query: 357 VSGYIYHHLLGHEVE---VQMVRNTLP----------RRFGAPGLPELNASQVFAVKSVL 403
+SG++YH LLGH++ ++ +NT R + AP L LN SQ+ A+K L
Sbjct: 740 LSGFLYHKLLGHDISEDSLEYNKNTFHKLMHKKVMSIRNYSAPNLAPLNHSQIDAIKRSL 799
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 463
P+SLIQGPPGTGKT+T A +VYH+ K G+VLV APSNVAVDQL+ +I +GLKVVR
Sbjct: 800 LSPLSLIQGPPGTGKTLTCATLVYHLVKMNMGKVLVTAPSNVAVDQLSVRIHRSGLKVVR 859
Query: 464 LCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRA 523
LC+KSRE+V S E+L LH Q++ L T EL+KL +LK+E GELS DE++ K L
Sbjct: 860 LCSKSRESVPSIAEYLYLHNQMKLLKTDIAEELNKLLELKEEVGELSQKDERRLKKLILF 919
Query: 524 TEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVG 583
E EI ADVICCTCVGA D RL FRFRQVL+DE+TQ+TEPECL+PLV GAKQ+VLVG
Sbjct: 920 AEHEILIEADVICCTCVGAMDKRLKKFRFRQVLVDEATQSTEPECLVPLVTGAKQIVLVG 979
Query: 584 DHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTL 643
DHCQLGP+I+CKKAA AGL +SLFERLV+LG+ P RL+VQYRMHP+LSEFPS FY+G+L
Sbjct: 980 DHCQLGPIIVCKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDGSL 1039
Query: 644 QNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL 703
QNG+T+ ER+ FPWP PMFFY G EE+SASGTSYLNR+EA+N+EK+V T L
Sbjct: 1040 QNGITLKEREYPLKSFPWPNAKCPMFFYNSTGLEEMSASGTSYLNRSEASNMEKLVRTLL 1099
Query: 704 RSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSC 763
+ G+ PSQIGVITPYEGQRAYI + +N + + +IEVASVD+FQGREKD+I+LSC
Sbjct: 1100 QCGLKPSQIGVITPYEGQRAYITSLFQKNISFQNS--SDIEVASVDAFQGREKDFILLSC 1157
Query: 764 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ------------------P 805
VRSN+ GIGFLNDPRRLNVALTRA+YG++I GN KVLS+
Sbjct: 1158 VRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVLSRHHFISREKINANETITNVNS 1217
Query: 806 LWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKI 841
+W LL+ +K+ + +VEG L NLK + P K+
Sbjct: 1218 VWINLLSQFKKKDLIVEGCLANLKPVNINIPTPTKL 1253
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Query: 136 GKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLH 195
K D + CRYC + + VV+CN +C++WFCN T GSHIV HLVR+KHKE+ LH
Sbjct: 239 SKDDLKYYRCRYCEIDSIDSVVQCN--NCKRWFCNGSYGTCGSHIVTHLVRSKHKEIRLH 296
Query: 196 KDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCL 238
K+S LGETILECYNC CRNVFLLGF+ E VVV++CR+PCL
Sbjct: 297 KNSLLGETILECYNCACRNVFLLGFLPTSEEGVVVIICRDPCL 339
>gi|323332050|gb|EGA73461.1| Nam7p [Saccharomyces cerevisiae AWRI796]
Length = 930
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/603 (59%), Positives = 444/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEE GF A ++++C YCG+ + CV++CN SC+KWFCN++ TS SHIVN
Sbjct: 42 FEEAQVTETGFRSPSA--SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIVN 97
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 98 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 153
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 154 QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 189
>gi|323336281|gb|EGA77552.1| Nam7p [Saccharomyces cerevisiae Vin13]
Length = 930
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/603 (59%), Positives = 444/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEE GF A ++++C YCG+ + CV++CN SC+KWFCN++ TS SHIVN
Sbjct: 42 FEEAQVTETGFRSPSA--SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIVN 97
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 98 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 153
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 154 QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 189
>gi|323307726|gb|EGA60989.1| Nam7p [Saccharomyces cerevisiae FostersO]
Length = 971
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/603 (58%), Positives = 443/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVC PSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHKDRILVCXPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEE GF A ++++C YCG+ + CV++CN SC+KWFCN++ TS SHIVN
Sbjct: 42 FEEAQXTETGFRSASA--SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIVN 97
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 98 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 153
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 154 QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 189
>gi|323347166|gb|EGA81441.1| Nam7p [Saccharomyces cerevisiae Lalvin QA23]
Length = 971
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/603 (58%), Positives = 443/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+ PECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASXPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEE GF A ++++C YCG+ + CV++CN SC+KWFCN++ TS SHIVN
Sbjct: 42 FEEAQVTETGFRSPSA--SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIVN 97
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 98 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 153
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 154 QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 189
>gi|444316488|ref|XP_004178901.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
gi|387511941|emb|CCH59382.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
Length = 1056
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/604 (57%), Positives = 448/604 (74%), Gaps = 9/604 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + + F E NEL++ GDE+ +RYSG +P W+
Sbjct: 327 LKESQALEHISVTWSLALNNRHLVSFALSTFESNELKVAVGDEMIIRYSG-VQYPEWEGR 385
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+E LEL+ ++ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 386 GYIVRLPNSFQDEFTLELKPNKEPPPTHLGTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 445
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V ++P F P +LN+SQ AV++VLQ+P+SLIQGPPGT
Sbjct: 446 ISGYLYYKILGHQVVDIAFDISMPSEFSIPKFAQLNSSQTNAVRNVLQKPLSLIQGPPGT 505
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA I+YH++K ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 506 GKTVTSATIIYHLSKLHSERILVCAPSNVAVDHLATKLRDLGLKVVRLTAKSREDVESSV 565
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH V S K EL KL +LK+E GELS++D KK+ L R TE EI + ADV+C
Sbjct: 566 SDLALHNLVAR---SSKGELRKLLRLKEEVGELSANDTKKFVKLVRKTESEILKKADVVC 622
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 623 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 681
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVT+++R
Sbjct: 682 AGDAGLKQSLFERLISLGHVPIRLEVQYRMNPFLSEFPSNMFYEGSLQNGVTLDQRTVPT 741
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ + PM F+ G+EEISA+GTSYLNR EA N E+++T + GV P QIGVIT
Sbjct: 742 STFPWPIHDVPMMFWANYGREEISANGTSYLNRIEAMNCERVITRLFKDGVKPEQIGVIT 801
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG L + LY +EVASVD+FQGREKDYIILSCVR+NE Q IGFL+
Sbjct: 802 PYEGQRAYILQYMQMNGTLDKDLYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFLS 861
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRR+NV LTRA+YG+V+LGNP+ LS+ LWN LL H+++ CLVEG L+NL+ VQ
Sbjct: 862 DPRRMNVGLTRAKYGLVVLGNPRSLSRNILWNHLLIHFRQKGCLVEGSLDNLQLCTVQLT 921
Query: 837 KPKK 840
+ ++
Sbjct: 922 RNRQ 925
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
Query: 116 EGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 175
+ + G + ++ + V E + ++HAC +CG+ PA V++CN +C+KWFCN + T
Sbjct: 104 DALNGTNLKDLTNVVNANEDALMNVSDHACAFCGIDKPASVIKCN--TCKKWFCNGKNGT 161
Query: 176 SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 235
+ SHIVNHLV + H V LH +S LG+TILECYNCGCRN F+LGF+SAK+++VVVLLCR
Sbjct: 162 NSSHIVNHLVLSHHNVVSLHPESDLGDTILECYNCGCRNAFILGFVSAKSDAVVVLLCRV 221
Query: 236 PC 237
PC
Sbjct: 222 PC 223
>gi|365759093|gb|EHN00906.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1033
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/603 (58%), Positives = 442/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 318 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 376
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 377 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 436
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 437 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 496
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 497 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 556
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 557 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 613
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQ +LVGDH QLGPVI+ +K
Sbjct: 614 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQAILVGDHQQLGPVILERK 672
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 673 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 732
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 733 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 792
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY +EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 793 PYEGQRAYILQYMQMNGSLDKDLYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 852
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 853 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 912
Query: 837 KPK 839
+P+
Sbjct: 913 RPQ 915
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEET GF A + ++C YCG+ + CV++CN SC+KWFCN++ TS SHI+N
Sbjct: 104 FEETQVAETGFPPASA--SGNSCAYCGIDSTKCVIKCN--SCKKWFCNTKNGTSSSHIIN 159
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 160 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 215
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 216 QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 251
>gi|448081930|ref|XP_004195009.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359376431|emb|CCE87013.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/605 (59%), Positives = 441/605 (72%), Gaps = 10/605 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++ +RW +GLN + +A F E NEL++ GDE+ LRY G + P W+
Sbjct: 255 LKESQALEHIQVRWSLGLNNRHLASFTLSTFETNELKVAVGDEIILRYGGLSQDP-WEGR 313
Query: 300 GHVIKLTA--QEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G +++L + QE+ LEL S+ P V + GF+ +FVWK TS+DRMQ AMKTFA+ + S
Sbjct: 314 GFIVRLPSAYQEDFTLELNPSKVPPPVHLTTGFTAEFVWKGTSYDRMQQAMKTFALKKES 373
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS YIYH +LGHEVE LP++ L ELN+SQ AVKSVLQRP+SLIQGPPGT
Sbjct: 374 VSSYIYHKILGHEVEPVEFDMKLPKKLSHASLTELNSSQTNAVKSVLQRPLSLIQGPPGT 433
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K++ GLKVVRL AKSRE V S V
Sbjct: 434 GKTVTSATIVYHLSKLHKKRILVCAPSNVAVDHLANKLNLLGLKVVRLTAKSREDVESSV 493
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+HL LH +V S + EL KL +++ GELS D K+ L R E + S DV+C
Sbjct: 494 KHLALHNKVYD---SARGELKKLYNMRNSLGELSEEDTKRLIQLSRTAEMRLLSSCDVVC 550
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RLA F+FR VLIDESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ K+
Sbjct: 551 CTCVGAGDRRLARFKFRTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILEKR 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERLV+LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVT ER
Sbjct: 611 AGDAGLKQSLFERLVVLGHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTTKERLIKN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWPV + PM F+ G+EEIS SG S+LNR EA NVEKI+T + G+ P QIGVIT
Sbjct: 671 ASFPWPVIDHPMMFWANYGREEISGSGHSFLNRVEAMNVEKIITRLFKDGIGPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQ--QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAY++ YMS N L + Y E+E+ SVD+FQGREKD+IILSCVR+N+ Q IGF
Sbjct: 731 PYEGQRAYLIQYMSINSTLTEMKDRYLEVEITSVDAFQGREKDFIILSCVRANDQQTIGF 790
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+D RRLNVALTRA+YG+VILGNP+ L + LWN LL H++E CLV+G L+NL+ SM+Q
Sbjct: 791 LSDSRRLNVALTRAKYGLVILGNPRALCRNTLWNHLLVHFREKGCLVDGTLDNLQLSMIQ 850
Query: 835 FQKPK 839
K
Sbjct: 851 LNTIK 855
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 93/133 (69%), Gaps = 12/133 (9%)
Query: 124 EETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNH 183
+E G D E E + + HAC YCG+ +P VV+C+ C KWFCN++ N SGSHIV H
Sbjct: 40 DEQGVDSE-IEVSEIELPPHACAYCGLHSPNSVVKCH--GCNKWFCNTKSNPSGSHIVTH 96
Query: 184 LVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKE 243
LV ++HK V LH++S LG+T LECYNCG +NVFLLG++SAK ESVVV+LCR PC
Sbjct: 97 LVLSRHKVVSLHEESDLGDTTLECYNCGNKNVFLLGYVSAKQESVVVILCRLPC------ 150
Query: 244 SQSKDNVTIRWDI 256
+QSKD I WD+
Sbjct: 151 AQSKD---INWDV 160
>gi|268569138|ref|XP_002640442.1| C. briggsae CBR-SMG-2 protein [Caenorhabditis briggsae]
Length = 1051
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/602 (58%), Positives = 444/602 (73%), Gaps = 7/602 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MKES S+ T+RW+ GL + +A+F P+ D ++L GDELRL+++ W +
Sbjct: 287 MKESASQAVGTVRWEHGLRQSVLAFFHLPQFADGVMKLAKGDELRLKHNQTVDGSEWSRI 346
Query: 300 GHVIKL--TAQEEVALELRASQGVPV-DINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G V+K+ EEV +E+R V + F+VD VW +T+F R A+ D+ S
Sbjct: 347 GSVMKIPDNHSEEVGIEIRGQVDRSVMESRIMFTVDVVWNATTFHRQYNALDALVNDQKS 406
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS Y+YH LLG + M++ LPRR APGLP+LN+SQ AVK VL RP+SLIQGPPGT
Sbjct: 407 VSPYLYHKLLGKPFDEMMLKFELPRRLSAPGLPDLNSSQSQAVKQVLTRPLSLIQGPPGT 466
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTV SA IVYH+ ++ +G VLVC+PSN+AVD LAEKI TGLKVVRLCA+SRE + V
Sbjct: 467 GKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVRLCARSREHSETTV 526
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
HLTL +Q++ L E L KL QLK+E GEL S D+ +Y+ LKR E E+ +ADVIC
Sbjct: 527 PHLTLQHQLKVLGGPE---LKKLIQLKEEIGELESKDDLRYRQLKRVKEHELLAAADVIC 583
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTC A D RL+ R R VLIDESTQATEPE L+ +V G +Q+VLVGDHCQLGPV++CKK
Sbjct: 584 CTCSSAADARLSKIRTRTVLIDESTQATEPEILVSIVRGVRQLVLVGDHCQLGPVVICKK 643
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL+QSLFERLVLLG++P RLQVQYRMHP LSEFPSN+FY+G+LQNGVT NERQ G
Sbjct: 644 AAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTENERQMKG 703
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
ID+ WP P++P FF+ G EE+SASGTS+LNRTEAANVEK+V+ ++ GV P QIGVIT
Sbjct: 704 IDWSWPTPSKPAFFWHCSGAEELSASGTSFLNRTEAANVEKLVSKLIKGGVEPRQIGVIT 763
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQR++IVNYM G L +LY+ +E+ASVD+FQGREKDYII++CVRSN+ GIGFL+
Sbjct: 764 PYEGQRSFIVNYMQTQGTLNSKLYEGVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLS 823
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVA+TRA+YGIV++GN KVLS+ LW L+ HYK+ + L EGP++ LK +
Sbjct: 824 DPRRLNVAITRAKYGIVVVGNAKVLSRHELWYELINHYKKKDMLYEGPISALKPFTMTLP 883
Query: 837 KP 838
KP
Sbjct: 884 KP 885
Score = 153 bits (386), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 115/214 (53%), Gaps = 31/214 (14%)
Query: 105 NSSNTSTSQIVEGMAGLSF---EETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNV 161
+S T Q +G + L F E+ D + +A EHACRYCG+S+P CV +C V
Sbjct: 47 SSQTTDLLQGTDGTSDLPFHDVEDESDSEKSLTEDQAKLPEHACRYCGISDPLCVAKCTV 106
Query: 162 PSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFI 221
C KWFCNS T G HIV+H+VR++HKE HKDSP G+T LECY C +NVF LGFI
Sbjct: 107 --CMKWFCNSNDGTPGGHIVHHMVRSQHKEAYTHKDSPCGDTQLECYRCASKNVFNLGFI 164
Query: 222 SAKTESVVVLLCREPCLNMMKESQSKDNVTIR-WDIGLNKKRVAYFVFPKEDNELRLVPG 280
K + VVV++CR PC N+ Q+ DN + W + +K++ ++ VP
Sbjct: 165 PGKKDQVVVIICRTPCANLA--FQNDDNWSPEDWKSVIAEKQLLSWIVN--------VPS 214
Query: 281 DELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALE 314
+E V K+TAQ+ + LE
Sbjct: 215 EE---------------QVARARKITAQQAIRLE 233
>gi|448086434|ref|XP_004196100.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359377522|emb|CCE85905.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 958
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/663 (55%), Positives = 457/663 (68%), Gaps = 20/663 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++ +RW +GLN + +A F E NEL++ GDE+ LRY G +W+
Sbjct: 255 LKESQALEHIQVRWSLGLNNRHLASFTLSTFETNELKVAVGDEIILRYGG-LNQDSWEGR 313
Query: 300 GHVIKLTA--QEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G +++L + QE+ LEL S+ P V + GF+ +FVWK TS+DRMQ AMKTFA+ + S
Sbjct: 314 GFIVRLPSAYQEDFTLELNPSKVPPPVHLTSGFTAEFVWKGTSYDRMQQAMKTFALKKES 373
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS YIYH +LGHEVE LP++ L ELN+SQ AVKSVLQRP+SLIQGPPGT
Sbjct: 374 VSSYIYHKILGHEVEPVEFDMKLPKKLSHASLTELNSSQTNAVKSVLQRPLSLIQGPPGT 433
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K++ GLKVVRL AKSRE V S V
Sbjct: 434 GKTVTSATIVYHLSKLHKKRILVCAPSNVAVDHLANKLNLLGLKVVRLTAKSREDVESSV 493
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+HL LH +V S K EL KL +++ GELS D K+ L R E + S DV+C
Sbjct: 494 KHLALHNKVYD---SAKGELKKLYNMRNSLGELSEDDTKRLIQLSRTAEMRLLSSCDVVC 550
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL F+FR VLIDESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ K+
Sbjct: 551 CTCVGAGDRRLTRFKFRTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILEKR 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERLV+LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVT ER
Sbjct: 611 AGDAGLKQSLFERLVVLGHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTTKERLIKN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWPV + PM F+ G+EEIS SG S+LNR EA NVEKI+T + G+ P QIGVIT
Sbjct: 671 ASFPWPVIDHPMMFWANYGREEISGSGHSFLNRVEAMNVEKIITRLFKDGIGPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQ--QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAY++ YMS N L + Y E+E+ SVD+FQGREKD+IILSCVR+N+ Q IGF
Sbjct: 731 PYEGQRAYLIQYMSINSTLTEMKDRYLEVEITSVDAFQGREKDFIILSCVRANDQQTIGF 790
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+D RRLNVALTRA+YG+VILGNP+ L + LWN LL H++E CLV+G L+NL+ SM+Q
Sbjct: 791 LSDSRRLNVALTRAKYGLVILGNPRALCRNTLWNHLLVHFREKGCLVDGTLDNLQLSMIQ 850
Query: 835 FQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHK--PGLH 892
K + + L PG SN D + Y P P+ K P L+
Sbjct: 851 LNTIKTKESSKGLSSQRFPG--------SNFAKDIDSASVLSYEPDIAPSLDEKQWPSLN 902
Query: 893 PAG 895
G
Sbjct: 903 QPG 905
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 86/117 (73%), Gaps = 11/117 (9%)
Query: 140 FTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSP 199
F HAC YCG+ +P VV+C+ C KWFCN++ N SGSHIV HLV ++HK V LH++S
Sbjct: 55 FPPHACAYCGLHSPNSVVKCH--GCNKWFCNTKSNPSGSHIVTHLVLSRHKVVSLHEESD 112
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
LG+T LECYNCG +NVFLLG++SAK ESVVV+LCR PC +QSKD I WD+
Sbjct: 113 LGDTTLECYNCGNKNVFLLGYVSAKQESVVVILCRLPC------AQSKD---INWDV 160
>gi|327200469|pdb|2XZL|A Chain A, Upf1-Rna Complex
Length = 802
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/599 (59%), Positives = 441/599 (73%), Gaps = 9/599 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 208 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 266
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 267 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 326
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 327 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 386
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 387 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 446
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 447 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 503
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 504 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 562
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 563 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 622
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 623 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 682
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 683 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 742
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 743 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQL 801
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 99/138 (71%), Gaps = 8/138 (5%)
Query: 141 TEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPL 200
++++C YCG+ + CV++CN SC+KWFCN++ TS SHIVNHLV + H V LH DS L
Sbjct: 10 SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIVNHLVLSHHNVVSLHPDSDL 67
Query: 201 GETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNK 260
G+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC ++++ + T +W +
Sbjct: 68 GDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----AQTKNANWDTDQWQPLIED 123
Query: 261 KRVAYFVF--PKEDNELR 276
+++ +V P E+ +L+
Sbjct: 124 RQLLSWVAEQPTEEEKLK 141
>gi|365763806|gb|EHN05332.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 971
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/603 (58%), Positives = 443/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+ PECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASGPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFE+L+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFEKLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEE GF A ++++C YCG+ + CV++CN SC+KWFCN++ TS SHIVN
Sbjct: 42 FEEAQVTETGFRSPSA--SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIVN 97
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 98 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 153
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 154 QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 189
>gi|365989598|ref|XP_003671629.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
gi|343770402|emb|CCD26386.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
Length = 993
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/603 (58%), Positives = 443/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 266 LKESQALEHISVTWSLALNNRHLASFALSTFETNELKVAVGDEMILWYSG-LQHPDWEGR 324
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ ++K FAVD+ S
Sbjct: 325 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDSLKKFAVDKKS 384
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V +P++F P +LN SQ AV+ VLQRP+SLIQGPPGT
Sbjct: 385 ISGYLYYKILGHQVVDITFDVPMPKQFSIPHFTQLNESQSKAVQHVLQRPLSLIQGPPGT 444
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH+ K + +VLVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 445 GKTVTSATIVYHLTKIHKDKVLVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 504
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL KL +LK+E GELS+SD K++ L R TE EI ADV+C
Sbjct: 505 SNLALHNLVAR---GSKGELRKLLRLKEEVGELSASDTKRFVKLVRKTESEILAKADVVC 561
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQATEPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 562 CTCVGAGDKRL-DTKFRTVLIDESTQATEPECLIPIVKGAKQVILVGDHKQLGPVILERK 620
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERL+ LG P RL++QYRM+P LSEFPSN FYEG+LQNGVTI +R S
Sbjct: 621 AGDAGLKQSLFERLISLGHIPFRLEIQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVSD 680
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EE+S++GTSYLNR EA N E+I+T + GV P QIGVIT
Sbjct: 681 STFPWPIHGVPMMFWANYGREELSSNGTSYLNRIEAMNCERIITKLFKDGVKPEQIGVIT 740
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NGA+ + LY ++EVASVD+FQGREKDYIILSCVR+N+ Q IGFL
Sbjct: 741 PYEGQRAYILQYMQMNGAMDKDLYVKVEVASVDAFQGREKDYIILSCVRANDQQAIGFLR 800
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP LS+ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 801 DPRRLNVGLTRAKYGLVILGNPMSLSRNLLWNHLLIHFREKGCLVEGTLDNLQLCTVQLS 860
Query: 837 KPK 839
+P+
Sbjct: 861 RPQ 863
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 89/115 (77%), Gaps = 11/115 (9%)
Query: 141 TEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPL 200
+EHAC YCG+ +P CVV+CN SC +WFCNS+ T+ SHIVNHLV ++H V LH DS L
Sbjct: 68 SEHACSYCGIDSPTCVVKCN--SCDRWFCNSKNGTTSSHIVNHLVLSRHNVVSLHPDSDL 125
Query: 201 GETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
G+T+LECYNCGC+NVFLLGF+SAK+E+VVVLLCR PC +Q+K+ + WD
Sbjct: 126 GDTVLECYNCGCKNVFLLGFVSAKSEAVVVLLCRIPC------AQTKN---VNWD 171
>gi|401624314|gb|EJS42376.1| nam7p [Saccharomyces arboricola H-6]
Length = 971
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/603 (58%), Positives = 443/603 (73%), Gaps = 9/603 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ L YSG HP W+
Sbjct: 256 LKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGR 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 315 GYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SG++Y+ +LGH+V LP+ F +LN+SQ AV VLQRP+SLIQGPPGT
Sbjct: 375 ISGFLYYKILGHQVVDISFDVPLPKEFSISNFAQLNSSQSNAVSHVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIVYHLSKIHRDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V K EL L +LKDE GELS+SD K++ L R TE EI ADV+C
Sbjct: 495 SNLALHNLVGR---GAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 610
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 611 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTIPN 670
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T R GV P QIGVIT
Sbjct: 671 SKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVIT 730
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 731 PYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 790
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ L++ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 791 DPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLV 850
Query: 837 KPK 839
+P+
Sbjct: 851 RPQ 853
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 105/156 (67%), Gaps = 10/156 (6%)
Query: 123 FEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVN 182
FEE GF A ++++C YCG+ + CV++CN SC+KWFCN++ TS SHI+N
Sbjct: 42 FEEAQVTETGFPSASA--SDNSCAYCGIDSAKCVIKCN--SCKKWFCNTKNGTSSSHIIN 97
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMK 242
HLV + H V LH DS LG+T+LECYNCG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 98 HLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC----A 153
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFVF--PKEDNELR 276
++++ + T +W + +++ +V P E+ +L+
Sbjct: 154 QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLK 189
>gi|156836785|ref|XP_001642437.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112963|gb|EDO14579.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 999
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/626 (58%), Positives = 454/626 (72%), Gaps = 13/626 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E NEL++ GDE+ LRYSG HP W+
Sbjct: 273 LKESQALEHISVTWSLALNNRHLASFALSTFESNELKVAVGDEMILRYSG-LQHPEWEGR 331
Query: 300 GHVIKL--TAQEEVALELRASQG-VPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + ++E LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 332 GYIVRLPNSFKDEFTLELKPSKIPAPTQLGTGFTAEFIWKGTSYDRMQDALKKFAIDKKS 391
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGHEV +P P LNASQ AV VLQ+P+SLIQGPPGT
Sbjct: 392 ISGYLYYKILGHEVHDIEFDVPIPTELSIPHFARLNASQASAVAHVLQKPLSLIQGPPGT 451
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 452 GKTVTSATIVYHLSKSHKDRILVCAPSNVAVDHLASKLRDLGLKVVRLTAKSREDVESSV 511
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH V S K EL KL +LK+E GELS++D KK+ L R E EI + ADV+C
Sbjct: 512 SDLALHNLVAR---SSKGELKKLLKLKEEVGELSATDAKKFVRLVRKAESEILKKADVVC 568
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQ++LVGDH QLGPVI+ +K
Sbjct: 569 CTCVGAGDKRL-DAKFRTVLIDESTQASEPECLIPIVKGAKQIILVGDHQQLGPVILERK 627
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERL+LLG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R G
Sbjct: 628 AGDAGLKQSLFERLILLGHVPIRLEVQYRMNPFLSEFPSNMFYEGSLQNGVTIEQRTIPG 687
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTS+LNR EA N E+I+T + GV P QIGVIT
Sbjct: 688 STFPWPIHEVPMMFWANYGREEISANGTSFLNRIEAMNCERIITRLFKDGVKPHQIGVIT 747
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L ++LY +EVASVD+FQGREKDYIILSCVR+NE Q IGFL+
Sbjct: 748 PYEGQRAYILQYMQMNGSLDKELYVNVEVASVDAFQGREKDYIILSCVRANEQQAIGFLS 807
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ LS+ LWN LL H++E CLVEGPLNNL+ VQ
Sbjct: 808 DPRRLNVGLTRAKYGLVILGNPRSLSRNVLWNHLLIHFREKGCLVEGPLNNLQLCTVQLT 867
Query: 837 K--PKKIYNDRRLFFGAG--PGIVPN 858
+ P K N R F G +PN
Sbjct: 868 RSHPNKRNNQSRFQFSLNGEVGEIPN 893
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 88/118 (74%), Gaps = 11/118 (9%)
Query: 138 ADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKD 197
A +EH+C YCG+ +P V++CN SC+KWFCNS+ + SHIVNHLV + H V LH D
Sbjct: 72 APVSEHSCAYCGIDSPTSVIKCN--SCKKWFCNSKNGATSSHIVNHLVLSHHNVVSLHPD 129
Query: 198 SPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
S LG+TILECYNCGC+NVFLLGF+SAK+E+VVVLLCR PC +Q+K+ + WD
Sbjct: 130 SDLGDTILECYNCGCKNVFLLGFVSAKSEAVVVLLCRVPC------AQTKN---VNWD 178
>gi|118388103|ref|XP_001027152.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila]
gi|89308922|gb|EAS06910.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila SB210]
Length = 1112
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/617 (54%), Positives = 449/617 (72%), Gaps = 10/617 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+ +++T++WDI L ++VA FV P+ EDNE L+ G EL++ Y + W +
Sbjct: 288 LKENLHYNSITVKWDISLKSRKVAQFVLPQGEDNEFNLLSGSELKITYKKNKKDEEWSAK 347
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
G + K+ +EV +EL + G++++FVWK T+ R++ +K F DE +S
Sbjct: 348 GTITKVGNNDEVFVELSHNVKDTPPSGKGYTIEFVWKHTAVKRIKKGIKKFWQDEKCISS 407
Query: 360 YIYHHLLGHEVEVQM---VRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
++Y +LGH+ E Q + LP+ + P +PELN QV AVK LQ+P+ LIQGPPGT
Sbjct: 408 FLYFQILGHQNEEQQTPTLDIQLPKHYSLPKMPELNYYQVEAVKKALQQPLCLIQGPPGT 467
Query: 417 GKTVTSAAIVYHMAKQGQ-----GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA 471
GKT TS AI+YH+ K Q GQVLVCAPSN+ VDQLAE+I G+KVVR+C++SRE
Sbjct: 468 GKTFTSTAIIYHLVKNIQKSGQRGQVLVCAPSNIVVDQLAERIHQAGIKVVRMCSRSREM 527
Query: 472 VSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQS 531
+SS VE LTLH QVR LD E E+ KL +LK++QGEL DE KY +LKR E+EI ++
Sbjct: 528 ISSSVEFLTLHNQVRSLDFDEYKEMQKLLELKEDQGELDHDDEDKYYSLKRQGEKEILRN 587
Query: 532 ADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
A+VIC TC+ + DPRL + RF+ VLIDE+TQA EPECL+P++ GAK V+LVGDH QLGPV
Sbjct: 588 AEVICSTCISSADPRLKDIRFKHVLIDEATQAIEPECLLPMLKGAKHVILVGDHRQLGPV 647
Query: 592 IMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE 651
+ C+ A+AGL +SLFER+V +G++PIRLQVQYRMHP LS FPSN+FYEGTLQNGVT N+
Sbjct: 648 VTCRDTAKAGLNKSLFERMVSMGIRPIRLQVQYRMHPDLSIFPSNTFYEGTLQNGVTFND 707
Query: 652 RQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ 711
RQ G +FPWP N+P+ F G EEIS+SGTSYLNR E A +E IV +++ V P Q
Sbjct: 708 RQFHG-EFPWPNKNKPLMFLNSCGVEEISSSGTSYLNRQETALIEDIVFRLIKAKVKPEQ 766
Query: 712 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
IG+ITPY+GQR YI +Y+S+NG L LY++IE+ASVD FQGREKDYII+SCVRSNE QG
Sbjct: 767 IGIITPYKGQRFYIGDYLSKNGRLNHVLYRQIEIASVDGFQGREKDYIIISCVRSNECQG 826
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQS 831
IGFL DPRRLNVA+TRARYG++I+GN KVL++ LWN LL H KE++ LV+G LN+L+Q
Sbjct: 827 IGFLTDPRRLNVAITRARYGLIIVGNAKVLARDNLWNNLLNHMKENKVLVDGTLNDLRQC 886
Query: 832 MVQFQKPKKIYNDRRLF 848
++F++P+K +R F
Sbjct: 887 TLKFRQPQKYVPERSEF 903
Score = 99.8 bits (247), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 92/164 (56%), Gaps = 11/164 (6%)
Query: 105 NSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSC 164
N N ST Q + +F++ ++ E F+ + HAC YCGV N V++C C
Sbjct: 57 NQDNESTQQ-GGNIFKSNFQKKENEDEVFDIDFKNLPSHACEYCGVHNKNSVIKCLNKDC 115
Query: 165 RKWFCNSRGNTSG-SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA 223
KWFCN + G SHI+ HLV++KHKE+ +H ++ +T +ECY C L+ +
Sbjct: 116 NKWFCNGKQQGQGASHIIMHLVKSKHKEIQVHPENQNSDTTIECYIC------LVHLKNQ 169
Query: 224 KTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFV 267
+ + +++ CR+PCLN+ K ++ + + +W+ +++K + ++
Sbjct: 170 EDQGLII--CRQPCLNLKKYNEMQWEIE-KWNPLIDEKMIVSWL 210
>gi|389583252|dbj|GAB65987.1| regulator of nonsense transcripts [Plasmodium cynomolgi strain B]
Length = 1470
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/636 (56%), Positives = 447/636 (70%), Gaps = 39/636 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KE Q + NVT+RWDIGLNKKR A+F++ KE++ELRLV GDEL+L Y+ W G
Sbjct: 535 IKEGQKQANVTVRWDIGLNKKRYAHFIYVKEESELRLVAGDELKLSYTYPDG-TIWSCEG 593
Query: 301 HVIKLTAQEEVALELRASQGVP----VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
H+ ++ EE+ALELR S +I G++V+FVWKST++DRMQ A+ FA D S
Sbjct: 594 HISRIHNTEEIALELRTSSTANGPWVNNITTGYTVEFVWKSTAYDRMQLALNEFAQDSYS 653
Query: 357 VSGYIYHHLLGHEV--------------EVQMVRNTLPRRFGAPGLPELNASQVFAVKSV 402
VSGY+YH LLGHEV +V R + AP L LN SQ+ A+K
Sbjct: 654 VSGYLYHKLLGHEVTEESLNYYKTALSNQVHGKRTQRIVNYSAPNLAALNHSQIDAIKKS 713
Query: 403 LQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVV 462
L P+SLIQGPPGTGKT+T A +VYH++K G+VLV APSNVAVDQL+ +I TGLKVV
Sbjct: 714 LVSPLSLIQGPPGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGLKVV 773
Query: 463 RLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR 522
RLCAKSRE V S ++L LH Q++ L + EL+KL +LK+E GELS DE++ K L
Sbjct: 774 RLCAKSREYVPSIADYLYLHNQMKLLKSDIGEELNKLLELKEEVGELSQKDERRLKKLIF 833
Query: 523 ATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLV 582
E +I ADVIC TCVGA D RL FRF QVL+DE+TQ+TEPECL+PLV GAKQ+VLV
Sbjct: 834 FAEYKILLEADVICTTCVGAMDKRLKRFRFSQVLVDEATQSTEPECLVPLVTGAKQIVLV 893
Query: 583 GDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGT 642
GDHCQLGP+I+CKKAA AGL +SLFERLV+LG+ P RL+VQYRMHP+LSEFPS FY+G
Sbjct: 894 GDHCQLGPIIVCKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDGC 953
Query: 643 LQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF 702
LQNG+T+ ER+ DFPWP P PMFFY G EE+SASGTSYLNR EA+N+EK+V T
Sbjct: 954 LQNGITLKEREYPLKDFPWPNPKCPMFFYNSTGLEEMSASGTSYLNRAEASNMEKLVRTL 1013
Query: 703 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 762
+ G+ P+QIGVITPYEGQRAYI + +N + Q EIEVASVD+FQGREKD+I+LS
Sbjct: 1014 INCGLKPTQIGVITPYEGQRAYITSLFQKN--ISYQHSTEIEVASVDAFQGREKDFILLS 1071
Query: 763 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ------------------ 804
CVRSN+ GIGFLNDPRRLNVALTRA+YG++I GN KVLS+
Sbjct: 1072 CVRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVLSRHHVMIKRSYNSNETITNVN 1131
Query: 805 PLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 840
+W LL+ +K+ + +VEG L+NLK + P K
Sbjct: 1132 SVWINLLSQFKKKDLIVEGCLSNLKPMNIHIPTPTK 1167
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
CRYC + + VV+CN +C +WFCN T GSHIV HLVR+KHKE+ LHK S LGETI
Sbjct: 155 CRYCEMDSVDSVVQCN--TCSRWFCNGSYGTCGSHIVTHLVRSKHKEIKLHKKSLLGETI 212
Query: 205 LECYNCGCRNVFLLGFISAKTESVVVLLCREPCL 238
LECYNCGC+NVFLLGF+ E VVV++CR+PCL
Sbjct: 213 LECYNCGCKNVFLLGFLPTPEEGVVVIICRDPCL 246
>gi|221055089|ref|XP_002258683.1| regulator of nonsense transcripts [Plasmodium knowlesi strain H]
gi|193808753|emb|CAQ39455.1| regulator of nonsense transcripts, putative [Plasmodium knowlesi
strain H]
Length = 1516
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/636 (56%), Positives = 450/636 (70%), Gaps = 39/636 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KE Q + NVT+RWDIGLNKKR A+F++ KE++ELRLV GDEL+L Y+ W G
Sbjct: 626 IKEGQKQANVTVRWDIGLNKKRYAHFIYVKEESELRLVAGDELKLSYTYPDG-TIWSCEG 684
Query: 301 HVIKLTAQEEVALELRASQ---GVPVD-INHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
H+ ++ EE+ALELR S G VD I G++V+FVWKST++DRMQ A+ FA + S
Sbjct: 685 HISRIHNTEEIALELRTSNTANGPWVDNITTGYTVEFVWKSTAYDRMQLALNEFAQNSYS 744
Query: 357 VSGYIYHHLLGHEVEV------------QMVRNTLPR--RFGAPGLPELNASQVFAVKSV 402
+SGY+YH LLGHEV Q+ PR + AP L LN SQ+ A+K
Sbjct: 745 LSGYLYHKLLGHEVSEDSLNYYKAALTNQIHGKRTPRIANYSAPNLAALNHSQIDAIKKS 804
Query: 403 LQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVV 462
L P+SLIQGPPGTGKT+T A +VYH++K G+VLV APSNVAVDQL+ +I TGLKVV
Sbjct: 805 LVSPLSLIQGPPGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGLKVV 864
Query: 463 RLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR 522
RLCAKSRE V S ++L LH Q++ + + EL+KL +LK+E GELS DE++ K L
Sbjct: 865 RLCAKSREYVPSIADYLYLHNQMKLIKSDIGEELNKLLELKEEVGELSQKDERRLKKLIF 924
Query: 523 ATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLV 582
E +I ADVIC TCVGA D RL FRF QVL+DE+TQ+TEPECL+PLV GAKQ+VLV
Sbjct: 925 FAEYKILVEADVICTTCVGAMDKRLKRFRFSQVLVDEATQSTEPECLVPLVTGAKQIVLV 984
Query: 583 GDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGT 642
GDHCQLGP+I+CKKAA AGL +SLFERLV+LG+ P RL+VQYRMHP+LSEFPS FY+G
Sbjct: 985 GDHCQLGPIIVCKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDGC 1044
Query: 643 LQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF 702
LQNG+T+ ER+ DFPWP P PMFFY G EE+SASGTSYLNR EA+N+EK+V T
Sbjct: 1045 LQNGITLKEREYPLKDFPWPNPKCPMFFYNSTGLEEMSASGTSYLNRAEASNMEKLVRTL 1104
Query: 703 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 762
+ G+ PSQIGVITPYEGQRAYI + +N + Q EIEVASVD+FQGREKD+I+LS
Sbjct: 1105 INCGLKPSQIGVITPYEGQRAYITSLFQKN--ISYQHSTEIEVASVDAFQGREKDFILLS 1162
Query: 763 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ------------------ 804
CVRSN+ GIGFLNDPRRLNVALTRA+YG++I GN KVLS+
Sbjct: 1163 CVRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVLSRHHVMIKKLHNSNETITNVN 1222
Query: 805 PLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 840
+W LL+ +K+ + +VEG L+NLK + P K
Sbjct: 1223 SVWINLLSQFKKKDLIVEGCLSNLKPMNIHIPTPTK 1258
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
CRYC + + VV+CN +C +WFCN T GSHIV HLVR+KHKE+ LHK S LGETI
Sbjct: 271 CRYCEMDSVDSVVQCN--TCGRWFCNGSYGTCGSHIVTHLVRSKHKEIKLHKKSLLGETI 328
Query: 205 LECYNCGCRNVFLLGFISAKTESVVVLLCREPCL 238
LECYNCGC+NVFLLGF+ E VVV++CR+PCL
Sbjct: 329 LECYNCGCKNVFLLGFLPTPEEGVVVIICRDPCL 362
>gi|149237651|ref|XP_001524702.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451299|gb|EDK45555.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 977
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/601 (59%), Positives = 442/601 (73%), Gaps = 10/601 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYF-VFPKEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++ ++W +GLN + +A F + E L++ GDE+ LRY+G P W+
Sbjct: 256 LKESQALEHIQVKWALGLNNRHLASFTLMTYETTNLKVAVGDEIILRYNGSQQEP-WEGS 314
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G +++L + QEE LEL S+ P ++ +GF+ +FVWK TS+DRMQ AMK FA DE S
Sbjct: 315 GFILRLPNSYQEEFTLELNPSKIPPPTNLTNGFTAEFVWKGTSYDRMQQAMKDFATDEES 374
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS YIYH LLGH+V TLP++F P L ELN SQ AV+SVLQRP+SLIQGPPGT
Sbjct: 375 VSSYIYHKLLGHDVAPIEFDITLPKKFSHPKLTELNISQTNAVRSVLQRPLSLIQGPPGT 434
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA I+YH+++ + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 435 GKTVTSATIIYHLSRSNKEKILVCAPSNVAVDHLAAKLDTLGLKVVRLTAKSREDVESSV 494
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
HL LH V + K EL KL +LK+E GELS D K + R +E +I ADV+C
Sbjct: 495 GHLALHNIV---SKTAKGELKKLLKLKNEVGELSMEDSKSFIRNLRTSELKILSKADVVC 551
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGA D RLA F+FR VLIDESTQA+EPE LIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 552 CTCVGAADKRLAQFKFRTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDRK 611
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERLV LG PIRL+VQYRMHP LSEFPSN FYEG+LQNGVT +R
Sbjct: 612 AADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSKDRLVEE 671
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWPV + PM F+ G+EE+S SG SYLNR EA NVE+I+T + G+ P QIGVIT
Sbjct: 672 AMFPWPVLDTPMMFWANYGREELSGSGNSYLNRVEAMNVERIITRLFKDGIKPEQIGVIT 731
Query: 717 PYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
PYEGQRAY+V +MS N + ++ Y E+E+ SVD+FQGREKD+IILSCVR+N+ Q IGF
Sbjct: 732 PYEGQRAYLVQFMSINSTILDKRDQYLEVEITSVDAFQGREKDFIILSCVRANDSQSIGF 791
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRA+YG++ILGNP+ L + LWN LL H++E CLV+GPL+NL+ SMVQ
Sbjct: 792 LSDPRRLNVALTRAKYGLLILGNPRALCRNKLWNHLLIHFREKGCLVDGPLDNLQLSMVQ 851
Query: 835 F 835
Sbjct: 852 L 852
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 99/151 (65%), Gaps = 25/151 (16%)
Query: 105 NSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSC 164
+ +N +TS +V+G G E G +V EHAC YCGV P V++CN +C
Sbjct: 35 DQTNENTSGLVDGQEG----EEGQEV----------CEHACAYCGVDTPNAVIKCN--TC 78
Query: 165 RKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK 224
KWFCN + N+S SHIV HLV ++H +V LH++S LGET LECYNCG +NVF+LGF+SAK
Sbjct: 79 NKWFCNDKTNSSSSHIVTHLVMSRHNQVSLHEESDLGETTLECYNCGNKNVFMLGFVSAK 138
Query: 225 TESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
ESVVV+LCR PC ++SKD I WD
Sbjct: 139 QESVVVILCRLPC------ARSKD---INWD 160
>gi|156096655|ref|XP_001614361.1| regulator of nonsense transcripts [Plasmodium vivax Sal-1]
gi|148803235|gb|EDL44634.1| regulator of nonsense transcripts, putative [Plasmodium vivax]
Length = 1539
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/637 (56%), Positives = 450/637 (70%), Gaps = 40/637 (6%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KE Q + NVT+RWDIGLNKKR A+F++ KE++ELRLV GDEL+L Y+ W G
Sbjct: 650 IKEGQKQANVTVRWDIGLNKKRYAHFIYVKEESELRLVAGDELKLSYTYPNG-TVWSCEG 708
Query: 301 HVIKLTAQEEVALELRASQGVP----VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
H+ ++ EE+ALELR S +I G++V+FVWKST++DRMQ A+ FA + S
Sbjct: 709 HISRIHNTEEIALELRTSSTANGPWVNNITTGYAVEFVWKSTAYDRMQLALNEFAQNSYS 768
Query: 357 VSGYIYHHLLGHEVEVQMV-------------RNTLPR--RFGAPGLPELNASQVFAVKS 401
+SGY+YH LLGHEV + + + + PR + AP L LN SQ+ A+K
Sbjct: 769 LSGYLYHKLLGHEVSEESLNYYKTALSSQVHGKRSPPRIVNYSAPNLAALNHSQIDAIKK 828
Query: 402 VLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKV 461
L P+SLIQGPPGTGKT+T A +VYH++K G+VLV APSNVAVDQL+ +I TGLKV
Sbjct: 829 SLVSPLSLIQGPPGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGLKV 888
Query: 462 VRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALK 521
VRLCAKSRE V S ++L LH Q++ L + EL+KL +LK+E GELS DE++ K L
Sbjct: 889 VRLCAKSREYVPSIADYLYLHNQMKLLKSDIGEELNKLLELKEEVGELSQKDERRLKKLI 948
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
E +I ADVIC TCVGA D RL FRF QVL+DE+TQ+TEPECL+PLV GAKQ+VL
Sbjct: 949 FFAEYKILLEADVICTTCVGAMDKRLKRFRFSQVLVDEATQSTEPECLVPLVTGAKQIVL 1008
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEG 641
VGDHCQLGP+I+CKKAA AGL +SLFERLV+LG+ P RL+VQYRMHP+LSEFPS FY+G
Sbjct: 1009 VGDHCQLGPIIVCKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDG 1068
Query: 642 TLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTT 701
LQNG+T+ ER+ DFPWP P PMFFY G EE+SASGTSYLNR EA+N+EK+V T
Sbjct: 1069 CLQNGITLKEREYPLKDFPWPNPKCPMFFYNSTGLEEMSASGTSYLNRAEASNMEKLVRT 1128
Query: 702 FLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
+ G+ P+QIGVITPYEGQRAYI + +N + Q EIEVASVD+FQGREKD+I+L
Sbjct: 1129 LISCGLKPTQIGVITPYEGQRAYITSLFQKN--ISYQHSTEIEVASVDAFQGREKDFILL 1186
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ----------------- 804
SCVRSN+ GIGFLNDPRRLNVALTRA+YG++I GN KVLS+
Sbjct: 1187 SCVRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVLSRHHVMIKKMHNSNETITNV 1246
Query: 805 -PLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 840
+W LL+ +K+ E +VEG L+NLK + P K
Sbjct: 1247 NSVWINLLSQFKKKELIVEGCLSNLKPMNIHIPTPMK 1283
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
CRYC + + VV+CN +C +WFCN T GSHIV HLVR+KHKE+ LHK S LGETI
Sbjct: 270 CRYCEMDSVDSVVQCN--TCNRWFCNGSYGTCGSHIVTHLVRSKHKEIKLHKKSLLGETI 327
Query: 205 LECYNCGCRNVFLLGFISAKTESVVVLLCREPCL 238
LECYNCGC+NVFLLGF+ E VVV++CR+PCL
Sbjct: 328 LECYNCGCKNVFLLGFLPTPEEGVVVIICRDPCL 361
>gi|255713384|ref|XP_002552974.1| KLTH0D05786p [Lachancea thermotolerans]
gi|238934354|emb|CAR22536.1| KLTH0D05786p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/605 (58%), Positives = 448/605 (74%), Gaps = 9/605 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W +GL+ + +A F E N L++ GDE+ LRYSG HP W+
Sbjct: 262 LKESQALEHISVSWSLGLSNRHLASFALSTFESNGLKVAVGDEMILRYSG-VQHPEWEGH 320
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+++ LEL+ S+ P N GF+ +FVWK TS+DRMQ AMK FAV + S
Sbjct: 321 GYIVRLPNSFQDQLTLELKPSKTPPPTSFNTGFTAEFVWKGTSYDRMQEAMKKFAVVKKS 380
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VSG++Y+ +LGHEV LP +F P +LN SQ A++ VLQRP+SLIQGPPGT
Sbjct: 381 VSGFLYYKILGHEVPDLEFDVNLPEQFSIPHFTQLNVSQANAIRHVLQRPLSLIQGPPGT 440
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 441 GKTVTSATIVYHLSKLHKERILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 500
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+L LH V S K EL KL +LK++ GELS SD KK+ R +E EI + ADV+C
Sbjct: 501 SNLGLHNLVSR---SAKGELKKLLKLKEDVGELSPSDAKKFVKQVRKSELEILKKADVVC 557
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL +FR VLIDESTQA+EPECLIP+V GAKQVVLVGDH QLGPVI+ +K
Sbjct: 558 CTCVGAGDKRLEA-KFRTVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRK 616
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R +
Sbjct: 617 AADAGLKQSLFERLISLGHIPIRLEVQYRMNPHLSEFPSNMFYEGSLQNGVTIEQRSVTN 676
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ + PM F+ G+EEIS +GTSYLNR EA N E+++T + GV P QIGVIT
Sbjct: 677 STFPWPIHDLPMMFWSNYGREEISGNGTSYLNRIEAMNCERVITKLFKDGVKPDQIGVIT 736
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYIV YM NG++ ++LY +EVASVD+FQGREKDYIILSCVR+NE Q IGFL+
Sbjct: 737 PYEGQRAYIVQYMQMNGSMDKELYMNVEVASVDAFQGREKDYIILSCVRANEQQAIGFLS 796
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVALTR++YG+VILGNP+ LS+ LW+ LL +++E CLVEG L NL+ VQ
Sbjct: 797 DPRRLNVALTRSKYGLVILGNPRSLSRNSLWSHLLVYFREKGCLVEGALGNLQLCTVQLT 856
Query: 837 KPKKI 841
K + +
Sbjct: 857 KSRNV 861
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 100/151 (66%), Gaps = 18/151 (11%)
Query: 105 NSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSC 164
N S S+I M G + E+ G+ +E A +E AC YC V + CVV+CN +C
Sbjct: 35 NELYVSNSEIAAVMPGEN-EDFGEPME------APPSEFACAYCNVDSAKCVVKCN--TC 85
Query: 165 RKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK 224
KWFCNS+ TS SHI+NHLV + H V LH +S LG+T+LECYNCGC+NVF+LGF+SAK
Sbjct: 86 NKWFCNSKNGTSSSHIINHLVLSHHNTVSLHPESDLGDTVLECYNCGCKNVFVLGFVSAK 145
Query: 225 TESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+E+VVV+LCR PC +Q+K T+ WD
Sbjct: 146 SEAVVVILCRLPC------AQTK---TVSWD 167
>gi|17510163|ref|NP_490829.1| Protein SMG-2 [Caenorhabditis elegans]
gi|351051256|emb|CCD73461.1| Protein SMG-2 [Caenorhabditis elegans]
Length = 1069
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/593 (57%), Positives = 439/593 (74%), Gaps = 7/593 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KES S+ T+RW+ GL + +A+F P+ D ++L GDELRL++S W +
Sbjct: 292 VKESASQAVGTVRWEQGLRQSVLAFFHLPQFADGVMKLAKGDELRLKHSQTVDGSEWTKI 351
Query: 300 GHVIKLTAQ--EEVALELRASQGVPV-DINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G V K+ +EV +E+R + V + F+VD VW +T+F+R A+ D +
Sbjct: 352 GSVFKIPDNHGDEVGIEIRGAVDKSVMESRIMFTVDVVWNATTFERQYKALAALLNDSKA 411
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+S Y+Y LLGH E M++ LPRR GLPELN+SQ+ AVK VL RP+SLIQGPPGT
Sbjct: 412 ISPYLYQKLLGHPAEEMMLKFDLPRRLSVAGLPELNSSQMQAVKQVLTRPLSLIQGPPGT 471
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTV SA IVYH+ ++ +G VLVC+PSN+AVD LAEKI TGLKVVRLCA+SRE + V
Sbjct: 472 GKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVRLCARSREHSETTV 531
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+LTL +Q++ + +E L KL QLKDE GEL D+ +Y LKR E E+ +ADVIC
Sbjct: 532 PYLTLQHQLKVMGGAE---LQKLIQLKDEAGELEFKDDLRYMQLKRVKEHELLAAADVIC 588
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTC A D RL+ R R VLIDESTQATEPE L+ ++ G +Q+VLVGDHCQLGPV++CKK
Sbjct: 589 CTCSSAADARLSKIRTRTVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKK 648
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL+QSLFERLVLLG++P RLQVQYRMHP LSEFPSN FY+G+LQNGVT N+R +G
Sbjct: 649 AAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTG 708
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
+D+ WP PN+P FF+ G EE+SASGTS+LNRTEAANVEK+V+ +++GV P QIGVIT
Sbjct: 709 VDWHWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQPHQIGVIT 768
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQR++IVNYM G L +LY+ +E+ASVD+FQGREKDYII++CVRSN+ GIGFL+
Sbjct: 769 PYEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLS 828
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
DPRRLNVA+TRA+YG+V++GN KVL++ LW+ L+ HYK E L EGP+N LK
Sbjct: 829 DPRRLNVAITRAKYGLVLVGNAKVLARHDLWHELINHYKSKEMLYEGPINALK 881
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 80/108 (74%), Gaps = 4/108 (3%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHACRYCG+S+P CV +C V CRKWFCNS TSG HIV+H+VR++HKE HKDSP G
Sbjct: 92 EHACRYCGISDPLCVAKCTV--CRKWFCNSNDGTSGGHIVHHMVRSQHKEAYTHKDSPCG 149
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDN 249
+T LECY CG +NVF LGFI K + VVV++CR PC ++ Q+ DN
Sbjct: 150 DTQLECYRCGSKNVFNLGFIPGKKDQVVVIICRTPCASIA--FQNDDN 195
>gi|308505126|ref|XP_003114746.1| CRE-SMG-2 protein [Caenorhabditis remanei]
gi|308258928|gb|EFP02881.1| CRE-SMG-2 protein [Caenorhabditis remanei]
Length = 1067
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/617 (56%), Positives = 444/617 (71%), Gaps = 22/617 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MKES S+ T+RW+ GL + +A+F P+ D ++L GDELRL++S W
Sbjct: 286 MKESASQAVGTVRWEQGLRQSVLAFFHLPQFADGVMKLAKGDELRLKHSQTVDGSEWTKT 345
Query: 300 GHVIKL--TAQEEVALELR-ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G V+K+ EEV +E+R + ++ F+VD VW +T+FDR A+ D +
Sbjct: 346 GSVMKIPDNHSEEVGIEIRGVVERSVMESRIMFTVDVVWNATTFDRQYRALHALLNDPKA 405
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS Y+YH LLG V+ M++ LPRR APGLP+LN+SQ+ AVK VL RP+SLIQGPPGT
Sbjct: 406 VSPYLYHKLLGKPVDEMMLKFELPRRLSAPGLPDLNSSQMQAVKQVLTRPLSLIQGPPGT 465
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTV SA IVYH+ ++ G VLVC+PSN+AVD LAEKI TGLKVVRLCA+SRE + V
Sbjct: 466 GKTVVSATIVYHLVQKTDGNVLVCSPSNIAVDHLAEKIHKTGLKVVRLCARSREHTETTV 525
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+LTL +Q++ + E L KL QLK+E GEL S D+ ++ LKR E E+ +ADVIC
Sbjct: 526 PYLTLQHQMKVMGGPE---LQKLIQLKEEIGELESKDDSRFLQLKRVKEHELLAAADVIC 582
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTC A D RL R R VLIDESTQATEPE L+ +V G +Q+VLVGDHCQLGPV++CKK
Sbjct: 583 CTCSSAADARLTKIRTRTVLIDESTQATEPEILVSIVRGVRQLVLVGDHCQLGPVVICKK 642
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE----- 651
AA AGL+QSLFERLVLLG++P RLQVQYRMHP LSEFPSN+FY+G+LQNGVT +E
Sbjct: 643 AAMAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTESELELFF 702
Query: 652 ----------RQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTT 701
RQ G+D+ WP PN+P FF+ G EE+S+SGTS+LNRTEAANVEK+V+
Sbjct: 703 VYLRPIFADDRQMKGVDWHWPTPNKPAFFWHCSGAEELSSSGTSFLNRTEAANVEKLVSK 762
Query: 702 FLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
++ GV P+QIGVITPYEGQR++IVNYM G L +LY+ +E+ASVD+FQGREKDYII+
Sbjct: 763 LIKGGVQPNQIGVITPYEGQRSFIVNYMHTQGTLNSKLYESVEIASVDAFQGREKDYIIV 822
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLV 821
+CVRSN+ GIGFLNDPRRLNVA+TRA+YGIV++GN KVL++ LW L+ HYK+ + L
Sbjct: 823 TCVRSNDILGIGFLNDPRRLNVAITRAKYGIVVVGNAKVLARHELWYELINHYKKKDMLY 882
Query: 822 EGPLNNLKQSMVQFQKP 838
EGP+N LK + KP
Sbjct: 883 EGPINALKVLNMTLPKP 899
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 96/155 (61%), Gaps = 7/155 (4%)
Query: 125 ETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHL 184
E D + + + EHACRYCG+S+P CV +C V C KWFCNS T G HIV+H+
Sbjct: 69 EESDSEKSLTEEQQNLPEHACRYCGISDPLCVAKCTV--CNKWFCNSNDGTPGGHIVHHM 126
Query: 185 VRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKES 244
VR++HKE HKDSP G+T LECY CG +NVF LGFI K + VVV++CR PC N+
Sbjct: 127 VRSQHKEAYTHKDSPCGDTQLECYRCGSKNVFNLGFIPGKKDQVVVIICRTPCANVA--F 184
Query: 245 QSKDNVTIR-WDIGLNKKRVAYFV--FPKEDNELR 276
Q+ DN + W + +K++ ++ P ED R
Sbjct: 185 QNDDNWSPEDWKSVIAEKQLLSWIVNVPSEDQVAR 219
>gi|17380277|sp|O76512.1|RENT1_CAEEL RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase smg-2; AltName:
Full=Nonsense mRNA reducing factor 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|3328177|gb|AAC26789.1| nonsense-mediated mRNA decay trans-acting factor [Caenorhabditis
elegans]
Length = 1069
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/593 (57%), Positives = 438/593 (73%), Gaps = 7/593 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KES S+ T+RW+ GL + +A+F P+ D ++L GDELRL++S W +
Sbjct: 292 VKESASQAVGTVRWEQGLRQSVLAFFHLPQFADGVMKLAKGDELRLKHSQTVDGSEWTKI 351
Query: 300 GHVIKLTAQ--EEVALELRASQGVPV-DINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G V K+ +EV +E+R + V + F+VD VW +T+F+R A+ D +
Sbjct: 352 GSVFKIPDNHGDEVGIEIRGAVDKSVMESRIMFTVDVVWNATTFERQYKALAALLNDSKA 411
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+S Y+Y LLGH E M++ LPRR GLPELN+SQ+ AVK VL RP+SLIQGPPGT
Sbjct: 412 ISPYLYQKLLGHPAEEMMLKFDLPRRLSVAGLPELNSSQMQAVKQVLTRPLSLIQGPPGT 471
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTV SA IVYH+ ++ +G VLVC+PSN+AVD LAEKI TGLKVVRLCA+SRE + V
Sbjct: 472 GKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVRLCARSREHSETTV 531
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+LTL +Q++ + +E L KL QLKDE GEL D+ +Y LKR E E+ +ADVIC
Sbjct: 532 PYLTLQHQLKVMGGAE---LQKLIQLKDEAGELEFKDDLRYMQLKRVKEHELLAAADVIC 588
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTC A D RL+ R R VLIDESTQATEPE L+ ++ G +Q+VLVGDHCQLGPV++CKK
Sbjct: 589 CTCSSAADARLSKIRTRTVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKK 648
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL+QSLFERLVLLG++P RLQVQYRMHP LSEFPSN FY+G+LQNGVT N+R +G
Sbjct: 649 AAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTG 708
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
+D+ WP PN+P FF+ G EE+SASGTS+LNRTEAANVEK+V+ +++GV P QIGVIT
Sbjct: 709 VDWHWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQPHQIGVIT 768
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
YEGQR++IVNYM G L +LY+ +E+ASVD+FQGREKDYII++CVRSN+ GIGFL+
Sbjct: 769 SYEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLS 828
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
DPRRLNVA+TRA+YG+V++GN KVL++ LW+ L+ HYK E L EGP+N LK
Sbjct: 829 DPRRLNVAITRAKYGLVLVGNAKVLARHDLWHELINHYKSKEMLYEGPINALK 881
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 80/108 (74%), Gaps = 4/108 (3%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHACRYCG+S+P CV +C V CRKWFCNS TSG HIV+H+VR++HKE HKDSP G
Sbjct: 92 EHACRYCGISDPLCVAKCTV--CRKWFCNSNDGTSGGHIVHHMVRSQHKEAYTHKDSPCG 149
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDN 249
+T LECY CG +NVF LGFI K + VVV++CR PC ++ Q+ DN
Sbjct: 150 DTQLECYRCGSKNVFNLGFIPGKKDQVVVIICRTPCASIA--FQNDDN 195
>gi|66805537|ref|XP_636490.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
gi|74852418|sp|Q54I89.1|RENT1_DICDI RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|60464869|gb|EAL62985.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
Length = 1331
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/611 (57%), Positives = 441/611 (72%), Gaps = 5/611 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY-SGDAAHPAWQSV 299
++ES S+ ++I W G+NK+ A F F + D E ++VPGDEL+L++ S W+
Sbjct: 385 LRESLSQSGISIEWSQGINKRYTATFPFSRSDLEFKVVPGDELKLQFISSTGGVIEWEDT 444
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
G VI + + ++LE ++ + ++ VW+STS +R+ AMK+FA+ E ++S
Sbjct: 445 GRVIHIDDENLLSLETKSRCSFDSGPKGSYRMEMVWRSTSSERILSAMKSFAIKEQALSS 504
Query: 360 YIYHHLLGH-EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
Y+YH LLGH ++ + LP F LP LN SQ+ AV VL P+SLIQGPPGTGK
Sbjct: 505 YLYHALLGHPDIPPAPLDIQLPTNFHLKNLPRLNESQISAVNKVLTAPLSLIQGPPGTGK 564
Query: 419 TVTSAAIVYHMAK--QGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
TV S+ I++H+ K +G +VLVC PSNVA+DQL K+ GLKVVRL +K RE V+SPV
Sbjct: 565 TVISSFIIHHLVKYVKGNDKVLVCTPSNVAIDQLTGKLHEIGLKVVRLSSKLREEVASPV 624
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
EHLTLH QV LD EL KL++LK+ G LS+ DEK+Y L+R E I + ADVIC
Sbjct: 625 EHLTLHKQVYKLDQMGDGELGKLRKLKEAFGSLSNEDEKRYIYLRRMMEMAILRKADVIC 684
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
TCVGAGDPRL+ FRF +LIDESTQA+EPECLIPL++GAKQV+LVGDH QLGPV++CKK
Sbjct: 685 ATCVGAGDPRLSQFRFPHILIDESTQASEPECLIPLMMGAKQVILVGDHRQLGPVLLCKK 744
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AGL+QSLFERL+ LG P RL +QYRMHPSL+EFPSN+ YEG L + ++ +R S
Sbjct: 745 VVDAGLSQSLFERLISLGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQS 804
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP P PMFF+ G EEIS+SGTS++N TEA+ EKIVT FL G +P QIG+IT
Sbjct: 805 -KFPWPQPKDPMFFFNCTGSEEISSSGTSFINTTEASICEKIVTKFLELGSLPGQIGIIT 863
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI ++M ++G L +LYK IEVASVDSFQGREKDYIILSCVRSN++QGIGFL
Sbjct: 864 PYEGQRAYITSHMQKSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQ 923
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVALTRAR+G++ILGN KVLSK PLWN L++H+K LVEG L NLKQS V Q
Sbjct: 924 DPRRLNVALTRARFGLIILGNAKVLSKDPLWNSLISHFKNKNVLVEGSLANLKQSPVILQ 983
Query: 837 KPKKIYNDRRL 847
KPKK+Y +L
Sbjct: 984 KPKKLYGQGKL 994
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 8/117 (6%)
Query: 121 LSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHI 180
L+FEE +++E HAC YC + VV+C PSC KWFCN +G T SHI
Sbjct: 168 LNFEEPQEEIE--------LPAHACAYCATHELSTVVKCMHPSCGKWFCNGKGKTKSSHI 219
Query: 181 VNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
+ HLV++KHKEV LH +S G+T LEC+NCGC+N+FLLGFI+A+TESVVVLLCR+PC
Sbjct: 220 ITHLVKSKHKEVALHPESSFGDTTLECFNCGCKNIFLLGFITARTESVVVLLCRDPC 276
>gi|302306557|ref|NP_982968.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|299788573|gb|AAS50792.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|374106171|gb|AEY95081.1| FABR022Cp [Ashbya gossypii FDAG1]
Length = 999
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/605 (57%), Positives = 439/605 (72%), Gaps = 9/605 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W +GLN + +A F E NEL++ GDE+ LRYSG W+
Sbjct: 264 LKESQALEHISVTWTLGLNNRHLASFALSTFESNELKVAVGDEMILRYSG-LQQAEWEGR 322
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+E LEL+ S+ P ++ GF+ +FVWK TS+ RMQ A+K FAVD+ S
Sbjct: 323 GYILRLPNSFQDEFTLELKPSKAPPPTNLTTGFTAEFVWKGTSYQRMQEALKKFAVDKKS 382
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LN SQV AV VLQRP+SLIQGPPGT
Sbjct: 383 ISGYLYYKILGHDVPDIEFEVDLPKDFSIPNFTKLNTSQVNAVAHVLQRPLSLIQGPPGT 442
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + +VLVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 443 GKTVTSATIVYHLSKMHKERVLVCAPSNVAVDHLAAKLRDMGLKVVRLTAKSREDVESSV 502
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH V S + EL KL +LKDE GELS D + + L R TE I + ADV+C
Sbjct: 503 SDLALHNLVAR---SSRGELKKLLKLKDEVGELSVKDTRSFVKLVRKTESTILKKADVVC 559
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP++ GAKQVVLVGDH QLGPVI+ +
Sbjct: 560 CTCVGAGDKRL-DSKFRTVLIDESTQASEPECLIPIIKGAKQVVLVGDHQQLGPVILDRN 618
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEGTLQNGVT+ +R
Sbjct: 619 AGDAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGTLQNGVTVEQRTVVD 678
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ + PM F+ G+EEISA+GTSYLNR EA N E+I+T + GV P QIGV+T
Sbjct: 679 SSFPWPICDIPMMFWANYGREEISANGTSYLNRIEAINCERIITRLFKDGVKPEQIGVVT 738
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG++ + LY +EVASVD+FQGREKDYIILSCVR+N+ Q IGFL
Sbjct: 739 PYEGQRAYIIQYMQMNGSMDKDLYMTVEVASVDAFQGREKDYIILSCVRANDQQSIGFLT 798
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVALTRA+YG+ ILGNP L + +WN LL H++E CLVEG ++NL+ +Q
Sbjct: 799 DPRRLNVALTRAKYGLAILGNPASLCRNSIWNHLLIHFREKGCLVEGTMDNLQLCTMQLT 858
Query: 837 KPKKI 841
+ K +
Sbjct: 859 RSKNV 863
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 109/159 (68%), Gaps = 15/159 (9%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YC + +P+CVV+CN +C KWFCNS+ TS SHI+NHLV + H V LH +S LG
Sbjct: 67 EHACSYCSIDSPSCVVKCN--ACNKWFCNSKNGTSSSHIINHLVFSHHNVVSLHPESDLG 124
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKK 261
+T+LECYNCGCRNVFLLGF+SAK+E+VVV+LCR PC ++++ + T +W + +
Sbjct: 125 DTVLECYNCGCRNVFLLGFVSAKSEAVVVILCRLPC----AQTRNVNWDTDQWQSLIENR 180
Query: 262 RVAYFVF--PKEDNELR---LVPGD----ELRLRYSGDA 291
++ +V P E+++L+ + P E++ R + DA
Sbjct: 181 QLLSWVAEEPSEEDQLKACLITPSQISKLEMKWRSNKDA 219
>gi|403215170|emb|CCK69670.1| hypothetical protein KNAG_0C05720 [Kazachstania naganishii CBS
8797]
Length = 1000
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/606 (58%), Positives = 440/606 (72%), Gaps = 11/606 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + + F E NEL++ GDE+ L YSG +P W+
Sbjct: 285 LKESQALEHISVSWSLALNNRHLVSFALSTYESNELKVAVGDEMSLWYSG-LQNPDWEGR 343
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + Q+ LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FAVD+ S
Sbjct: 344 GYIVRLPNSYQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAVDKKS 403
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SG++Y+ +LGHEV LP+ F LNASQ AVK VL+RP+SLIQGPPGT
Sbjct: 404 ISGFLYYKILGHEVVDVSFDVPLPKEFSISHFAHLNASQSNAVKHVLERPLSLIQGPPGT 463
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH+AK + ++LVCAPSNVAVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 464 GKTVTSATIVYHLAKIHKDRILVCAPSNVAVDHLASKLRDLGLKVVRLTAKSREDVESSV 523
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH V S + EL KL +LKDE GELS+ +++ L + E EI ADV+C
Sbjct: 524 SDLALHNLVAK---SSQGELKKLLKLKDEVGELSAVGTRRFVKLVKKAELEILAKADVVC 580
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + RFR VLIDESTQATEPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 581 CTCVGAGDKRL-DTRFRTVLIDESTQATEPECLIPIVKGAKQVILVGDHQQLGPVILERK 639
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEGTLQNGVTI +R
Sbjct: 640 AADAGLKQSLFERLISLGHVPIRLEVQYRMNPHLSEFPSNMFYEGTLQNGVTIEQRTVLN 699
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEIS +GTSYLNR EA N E+I+T R GV P QIGVIT
Sbjct: 700 STFPWPIHGVPMMFWANYGREEISGNGTSYLNRIEAMNCERIITKLFRDGVKPEQIGVIT 759
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAY++ YM NGA+ + LY ++EVASVD+FQGREKDYIILSCVR+NE Q IGFL
Sbjct: 760 PYEGQRAYVLQYMQMNGAMDKSLYLKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLR 819
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG+VILGNP+ LS+ LWN LL H++E CLVEG L+NL+ VQ
Sbjct: 820 DPRRLNVGLTRAKYGLVILGNPRSLSRNLLWNHLLVHFREKGCLVEGALDNLQLCTVQLT 879
Query: 837 K--PKK 840
K P+K
Sbjct: 880 KLPPRK 885
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
Query: 141 TEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPL 200
E AC YCGV + VV+CNV C KWFCNS+ T+ SHIVNHLV + H V LH +S L
Sbjct: 87 VECACAYCGVDQASSVVKCNV--CSKWFCNSKNGTNSSHIVNHLVLSHHSVVSLHPESDL 144
Query: 201 GETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
G+T+LECY CG +NVFLLGF+SAK+E+VVVLLCR PC
Sbjct: 145 GDTVLECYQCGRKNVFLLGFVSAKSEAVVVLLCRMPC 181
>gi|156065921|ref|XP_001598882.1| hypothetical protein SS1G_00971 [Sclerotinia sclerotiorum 1980]
gi|154691830|gb|EDN91568.1| hypothetical protein SS1G_00971 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 972
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/563 (62%), Positives = 419/563 (74%), Gaps = 48/563 (8%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D + IRWD GLN K +A F+ PK E +++L GDE+RL+Y G+ P W+ V
Sbjct: 297 LKEAQSEDGLIIRWDYGLNNKHLASFILPKIELGDVKLAVGDEMRLKYKGEL-RPVWEGV 355
Query: 300 GHVIKL--TAQEEVALELRA---SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+V+K+ +EV +ELR + VP + H FS D+VWK+TS+DRMQ AMKTFAVDE
Sbjct: 356 GYVVKIPNNQSDEVTIELRKVGNDKSVPTECTHNFSADYVWKATSYDRMQFAMKTFAVDE 415
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGHEV ++ +P++F PGLPELN+SQ+ AVKSVLQ+P+SLIQGPP
Sbjct: 416 MSVSGYIFHKLLGHEVAAAPMKIQMPKKFSVPGLPELNSSQINAVKSVLQKPLSLIQGPP 475
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA ++YH+AK GQVLVCAPSNVAVDQL E+I T LKVVRL AKSRE V S
Sbjct: 476 GTGKTVTSATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRTQLKVVRLTAKSREDVES 535
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
V L+LH QVR D++ EL KL QLK E GELSS DEKK+KAL RA EREI +ADV
Sbjct: 536 SVGFLSLHEQVRMNDSNH--ELAKLTQLKSELGELSSQDEKKFKALTRAAEREILSNADV 593
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTCVGAGDPRLA +FR VLIDESTQ+ EPEC+IPLVLG KQVVL+GDH QLGPVIM
Sbjct: 594 ICCTCVGAGDPRLAKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLIGDHKQLGPVIMN 653
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV LGLKPI L VQY
Sbjct: 654 KKAAKAGLDQSLFERLVKLGLKPILLNVQY------------------------------ 683
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
P+ PM F+ +G EEISASGTSYLNRTEA+NVEKIVT F ++GV P IGV
Sbjct: 684 ---------PDTPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQPGDIGV 734
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPYEGQR+Y+V M G+ +++ YKE+EVASVD+FQGREKD+IILSCVRSN+HQGIGF
Sbjct: 735 ITPYEGQRSYVVTSMQNAGSFKKEHYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGF 794
Query: 775 LNDPRRLNVALTRARYGIVILGN 797
L+DPRRLNVALTRA+YG+VI G+
Sbjct: 795 LSDPRRLNVALTRAKYGLVIAGS 817
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 101/154 (65%), Gaps = 17/154 (11%)
Query: 104 NNSSNTSTSQI-VEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVP 162
++ N S + + ++GM L D+ E HAC YCG+ +P+CVV+C
Sbjct: 65 DDDDNESLASVPLDGMKTLGLRGLDDEKE--------LPAHACAYCGIHSPSCVVKC--L 114
Query: 163 SCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFIS 222
C KWFC++RG + SHIVNHLVRA+HKEV LH S LG+T+LECYNCG +NVFLLGFI
Sbjct: 115 GCNKWFCSARGTATSSHIVNHLVRARHKEVQLHPMSTLGDTVLECYNCGIKNVFLLGFIP 174
Query: 223 AKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
AK+++VVVLLCR+PC + SKD + WD+
Sbjct: 175 AKSDTVVVLLCRQPCASA---PSSKD---MSWDV 202
>gi|301618945|ref|XP_002938872.1| PREDICTED: regulator of nonsense transcripts 1 [Xenopus (Silurana)
tropicalis]
Length = 971
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/502 (65%), Positives = 404/502 (80%), Gaps = 5/502 (0%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 301 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 359
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 360 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 419
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 420 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 479
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 480 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 539
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
L LH Q+R++++ EL KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCT
Sbjct: 540 LALHNQIRNMES--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCT 597
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
CVGAGDPRLA +FR +LIDESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA
Sbjct: 598 CVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 657
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G D
Sbjct: 658 KAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFD 717
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
F WP P++PMFFYV GQEEI++SGTSYLNRT VE ++ + Q+G + +
Sbjct: 718 FQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTIDMEVECLLAKVIADFDPADQVGSLLAH 777
Query: 719 EGQRAYIVNYMSRNGALRQQLY 740
+ Y +R + +Y
Sbjct: 778 GARFMTTAMYDAREAIIPGSVY 799
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 106/152 (69%), Gaps = 12/152 (7%)
Query: 104 NNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPS 163
N + + + + + L+FEE +D Y D HAC YCG+ +PACVV CN +
Sbjct: 67 NGTVDDGVGKTSQLLGELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYCN--T 120
Query: 164 CRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA 223
+KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLGFI A
Sbjct: 121 SKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPA 180
Query: 224 KTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
K +SVVVLLCR+PC + +S KD I WD
Sbjct: 181 KADSVVVLLCRQPCAS---QSSLKD---INWD 206
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 933 VPPPGSRGFGAGRGSA---GAPIGSHLQHQQNTQQPIGTIG-STFNFPSLENSN---SQP 985
+PPPG FG G A G P G + + Q+ IG G S N P+ + S SQP
Sbjct: 844 MPPPGY--FGQANGPAPGRGMPKGKATRGGRQKQRGIGLPGMSQGNMPNSQASQDVVSQP 901
Query: 986 SVGGPLTQPGFVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
GPLTQ G+++ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 902 FSQGPLTQ-GYIS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 943
>gi|341881801|gb|EGT37736.1| hypothetical protein CAEBREN_04117 [Caenorhabditis brenneri]
Length = 1054
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/602 (56%), Positives = 438/602 (72%), Gaps = 7/602 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MKE S+ T+RW+ GL A+F P+ D ++L GDELRL+++ W V
Sbjct: 286 MKEQASQAVGTVRWEQGLRGSVCAFFHLPQFADGVMKLAKGDELRLKHNQTVDGSEWAKV 345
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINH-GFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G+V K+ EE+ +E+R V + F+VD VW +T+FDR A++ D S
Sbjct: 346 GNVFKIPDNHSEEIGIEIRGQVDRSVQESRIMFTVDVVWNATTFDRQYRALQALQTDNQS 405
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VS Y+Y LLG V+ M++ LPRR APGLP+LN+SQ+ AVK VL RP+SLIQGPPGT
Sbjct: 406 VSPYLYAKLLGKPVDELMLKFELPRRLSAPGLPDLNSSQMQAVKQVLTRPLSLIQGPPGT 465
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTV SA IVYH+ K+ +G VLVC+PSN+AVD LAEKI TGLKVVRL AKSRE + +
Sbjct: 466 GKTVVSATIVYHLVKKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVRLTAKSREHTDTTI 525
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+LTL +Q++ + EL KL QLK+E GEL + D+ +Y LKR E ++ +ADVIC
Sbjct: 526 PYLTLQHQLKVM---AGPELRKLIQLKEEIGELEAKDDIRYSQLKRVKEHDLLAAADVIC 582
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTC A D RL R R VLIDESTQATEPE L+ +V G +Q+VLVGDHCQLGPV++CKK
Sbjct: 583 CTCSSAADARLTKIRTRTVLIDESTQATEPEILVSIVRGVRQLVLVGDHCQLGPVVICKK 642
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA AGL+QSLFERLVLLG++P RLQVQYRMHP LSEFPSN+FY+G+LQNGVT N+R G
Sbjct: 643 AAMAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTENDRYMKG 702
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
+D+ WP N+P FF+ G EE+SASGTS+LNRTEAANVEK+V+ ++ GV P QIGVIT
Sbjct: 703 VDWHWPTHNKPAFFWHCSGAEELSASGTSFLNRTEAANVEKLVSKLIKGGVQPLQIGVIT 762
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQR++IVNYM G L +LY+ +E+ASVD+FQGREKDYII++CVRSN+ GIGFL+
Sbjct: 763 PYEGQRSFIVNYMHTQGTLNSKLYESVEIASVDAFQGREKDYIIVTCVRSNDALGIGFLS 822
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVA+TRA+YG+V++GN KVLS+ LW L+ H+K+ + L EGP++ LK +
Sbjct: 823 DPRRLNVAITRAKYGMVVVGNAKVLSRHELWYELINHFKKKDMLYEGPISALKPLNMTIP 882
Query: 837 KP 838
KP
Sbjct: 883 KP 884
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 95/150 (63%), Gaps = 13/150 (8%)
Query: 109 TSTSQIVEGMAG------LSF---EETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
T +SQ+ + + G L+F E+ +D + + EHAC+YCG+S+P CV +C
Sbjct: 44 TQSSQVTDFLPGVDATSELTFHDVEDESEDEKSLTDDQQKLPEHACKYCGISDPLCVAKC 103
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
V C KWFCNS T G HIV+H+VR++HKE HKDSP G+T LECY CG +NVF LG
Sbjct: 104 TV--CNKWFCNSNDGTPGGHIVHHMVRSQHKEAYTHKDSPCGDTQLECYRCGSKNVFNLG 161
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDN 249
FI K + VVV++CR PC N+ Q+ DN
Sbjct: 162 FIPGKKDQVVVIICRTPCANLA--FQNDDN 189
>gi|363749513|ref|XP_003644974.1| hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888607|gb|AET38157.1| Hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/623 (55%), Positives = 445/623 (71%), Gaps = 13/623 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W +GL + +A F E N +++ GDE+ LRYSG W+
Sbjct: 266 LKESQALEHISVTWSLGLKNRHLASFSLSTFESNGVKVAVGDEMILRYSG-LNQTGWEGR 324
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++L + ++E LEL++++ P ++ GF+ +FVWK TS+ RMQ A++ FAVD+ S
Sbjct: 325 GYILRLPDSFKDEYTLELKSTKSSPPTNLTTGFTAEFVWKGTSYGRMQEALRKFAVDKKS 384
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V LP+ F P +LNASQ A+K VLQRP+SLIQGPPGT
Sbjct: 385 ISGYLYYKILGHDVPDIEFEVDLPKEFSIPNFTKLNASQKNAIKHVLQRPLSLIQGPPGT 444
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA I+YH++K + ++LVCAPSN AVD LA K+ GLKVVRL AKSRE V S V
Sbjct: 445 GKTVTSATIIYHLSKMHKERLLVCAPSNTAVDHLAAKLRDLGLKVVRLTAKSREDVESSV 504
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH ++ S + EL KL +LK++ GELS+ + + + L R E I + ADV+C
Sbjct: 505 SDLALHNLIKR---SAQGELKKLLRLKEDAGELSARETRLFAKLVRKNESAILKKADVVC 561
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V G KQV+LVGDH QLGPVI+ +K
Sbjct: 562 CTCVGAGDKRL-DSKFRTVLIDESTQASEPECLIPVVKGTKQVILVGDHQQLGPVILDRK 620
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFE+LV LG PIRL+VQYRM+P LSEFPSN FYEGTLQNGVT+ +R
Sbjct: 621 AGNAGLKQSLFEKLVSLGHVPIRLEVQYRMNPYLSEFPSNMFYEGTLQNGVTVEQRTILE 680
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ + PM F+ G+EEISA+GTSYLNR EA N E+I+T + GV P+QIGVIT
Sbjct: 681 SSFPWPISDIPMMFWANYGREEISANGTSYLNRIEAINCERIITRLFKDGVKPAQIGVIT 740
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYIV YM NG++ + +Y +EV SVD+FQGREKDYIILSCVR+N+HQ IGFL
Sbjct: 741 PYEGQRAYIVQYMQMNGSMDKDMYMTVEVGSVDAFQGREKDYIILSCVRANDHQSIGFLV 800
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVALTRA+YG+ ILGNP L + LWN LL H++E CLVEG ++NL+ VQ
Sbjct: 801 DPRRLNVALTRAKYGLAILGNPTSLFRNRLWNHLLIHFREKGCLVEGTMDNLQLCTVQLT 860
Query: 837 KPKKIYNDRRLFFGAGPGIVPND 859
+ K +RR I ND
Sbjct: 861 RSK----NRRSRKNTKNSIDKND 879
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 98/137 (71%), Gaps = 8/137 (5%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC YC + +P CVV+CN +C KWFCNS+ TS SHIVNHLV + H V LH +S LG
Sbjct: 69 EHACSYCSIDSPGCVVKCN--ACDKWFCNSKHGTSSSHIVNHLVISHHNVVSLHSESDLG 126
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKK 261
T LECYNCGC+NVFLLGF+SAK+E+VVV+LCR PC ++++ + T +W ++ +
Sbjct: 127 ATTLECYNCGCKNVFLLGFVSAKSEAVVVILCRLPC----AQTKNVNWDTDQWQSLIDDR 182
Query: 262 RVAYFVF--PKEDNELR 276
++ +V P E+++L+
Sbjct: 183 KLLSWVADEPNEEDQLK 199
>gi|144583657|gb|ABP01542.1| UPF1, partial [Nicotiana attenuata]
Length = 473
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/347 (95%), Positives = 340/347 (97%)
Query: 239 NMMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQS 298
MMKESQSKDN+TIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQS
Sbjct: 127 KMMKESQSKDNLTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQS 186
Query: 299 VGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
VGHV+KLTAQEEVALELR SQGVPVD+ HG SVDFVWKSTSFDRMQ AMKTFAVDETSVS
Sbjct: 187 VGHVVKLTAQEEVALELRVSQGVPVDVTHGLSVDFVWKSTSFDRMQSAMKTFAVDETSVS 246
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYHHLLGHEVE+QMVRN LPRRFGAPGLPELNASQVFAVKSVLQ+PISLIQGPPGTGK
Sbjct: 247 GYIYHHLLGHEVEMQMVRNALPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGK 306
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSAAIVYH+AKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH
Sbjct: 307 TVTSAAIVYHVAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 366
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREI+QSADVICCT
Sbjct: 367 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREIAQSADVICCT 426
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDH 585
CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ VLVGDH
Sbjct: 427 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQAVLVGDH 473
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 6/41 (14%)
Query: 216 FLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDI 256
FLLGFISAK ESVVVLLCREPCLN+ + KD + WD+
Sbjct: 1 FLLGFISAKAESVVVLLCREPCLNV---NALKD---MNWDL 35
>gi|50303751|ref|XP_451821.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640953|emb|CAH02214.1| KLLA0B06435p [Kluyveromyces lactis]
Length = 969
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/604 (58%), Positives = 439/604 (72%), Gaps = 9/604 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ WD+ LN + +A F E NEL++ GDE+ L+YSG H W
Sbjct: 254 LKESQALEHISVTWDLALNNRHLATFALSTFESNELKVAVGDEMILKYSG-PQHADWTGK 312
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G +I+L + ++E LEL+ SQ P + GF+ FVW+ TS+ RMQ A++ FAV + S
Sbjct: 313 GFIIQLPNSFKDEFTLELKPSQKTPPTNCTTGFTAVFVWRGTSYIRMQEALRKFAVTKKS 372
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SG++Y+ +LG EV LP+ P ELN SQ AVK VLQRP+SLIQGPPGT
Sbjct: 373 LSGFLYYKILGQEVPDVEFDVELPKSIFVPHFTELNQSQSNAVKHVLQRPLSLIQGPPGT 432
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + +VLVCAPSNVAVD LA K+ + GLKVVRL AKSRE V S V
Sbjct: 433 GKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSV 492
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH V S + +L KL LK++ GELSSSD K+ L R +E I Q ADVIC
Sbjct: 493 SELALHNLVSR---SAEGKLKKLLNLKEKTGELSSSDTTKFVKLVRKSEATIIQKADVIC 549
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL +++FR VLIDESTQA+EPECLIP+V GAKQVVLVGDH QLGPVI+ +K
Sbjct: 550 CTCVGAGDKRL-DYKFRTVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRK 608
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R +
Sbjct: 609 AGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIAR 668
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEIS +GTSYLNR EA N EKI+T + GV P QIGVIT
Sbjct: 669 STFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVIT 728
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAY+V YM NG++ + LY +EVASVD+FQGREKDYIILSCVR+NE IGFL+
Sbjct: 729 PYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLS 788
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNVALTRA+YG++ILGNP+ LS+ LW+ LL H++E CLVEG L+NL+ VQ
Sbjct: 789 DPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLHFREKGCLVEGFLDNLQLCTVQLT 848
Query: 837 KPKK 840
KP +
Sbjct: 849 KPSR 852
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 94/139 (67%), Gaps = 8/139 (5%)
Query: 140 FTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSP 199
EHAC YCG+ N +CVV+CN+ C KWFCNS+ T+ SHIVNHLV + H V LH DS
Sbjct: 55 IAEHACAYCGIDNTSCVVKCNI--CSKWFCNSKNGTNSSHIVNHLVLSHHSSVSLHPDSE 112
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLN 259
LG+T LECYNCG NVF+LGF+ AK+E+VVVLLCR PC M + DN W +
Sbjct: 113 LGDTTLECYNCGRTNVFVLGFVPAKSEAVVVLLCRLPCAKMKNVNWDTDN----WQPLIE 168
Query: 260 KKRVAYFVF--PKEDNELR 276
++++ +V P E+++L+
Sbjct: 169 ERKMLSWVAEEPSEEDQLK 187
>gi|82915224|ref|XP_729015.1| nonsense mRNA reducing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-related [Plasmodium yoelii yoelii]
Length = 1297
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/648 (54%), Positives = 442/648 (68%), Gaps = 51/648 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KE + NVTIRWD+GLNKKR AYFV+ KE++ELR+V GDEL++ Y+ + W G
Sbjct: 488 IKEGHKQTNVTIRWDVGLNKKRYAYFVYIKEESELRIVVGDELKISYTYPNGN-IWGCEG 546
Query: 301 HVIKLTAQEEVALELRASQGVP----VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
H+ +L + EE+ALEL+ + +IN GF V+FVWKST++DRMQ A+ FA + S
Sbjct: 547 HISRLNSNEEIALELKVLYNIDGPWNYNINTGFVVEFVWKSTAYDRMQLALNEFAFNSFS 606
Query: 357 VSGYIYHHLLGHEV-------------------------EVQMVRNTLPRRFGAPGLPEL 391
+SGY+YH LLGH++ + + + AP L L
Sbjct: 607 LSGYLYHKLLGHDIIDEPIDYNKKEFNLNNDNKKYNKKLNDNLYTSYKIVNYSAPNLAPL 666
Query: 392 NASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQG-QVLVCAPSNVAVDQL 450
N SQ+ A+K L P+SLIQGPPGTGKT+T A +VYHM K G +VLV APSNVAVDQL
Sbjct: 667 NHSQIDAIKKSLNSPLSLIQGPPGTGKTLTCATLVYHMHKTKMGGKVLVTAPSNVAVDQL 726
Query: 451 AEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELS 510
+ +I TGLKVVRLCA+SRE+VSS ++L LH QV+ L T EL+KL +LK+E GELS
Sbjct: 727 SVRIHRTGLKVVRLCARSRESVSSIADYLYLHNQVKLLKTDVGEELNKLLELKEEVGELS 786
Query: 511 SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLI 570
DE + K L E +I ADVIC TCVGA D RL FRF QVLIDE+TQ+TEPECL+
Sbjct: 787 QKDENRLKKLILHAEYKILTEADVICTTCVGAMDKRLKRFRFNQVLIDEATQSTEPECLV 846
Query: 571 PLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSL 630
P+V GAKQ+VLVGDHCQLGP+I+CKKAA +GL +SLFERLV+LG+ P RL+VQYRMHP L
Sbjct: 847 PIVTGAKQIVLVGDHCQLGPIIVCKKAASSGLGKSLFERLVMLGITPFRLEVQYRMHPCL 906
Query: 631 SEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRT 690
SEFPS FY+G LQNG+T+ ER+ +FPWP PMFFY G EE+SASGTSYLNR
Sbjct: 907 SEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFFYNSNGLEEMSASGTSYLNRN 966
Query: 691 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 750
EA N+E +V L +G+ +QIGVITPYEGQRAYI + +N + + L +IEVASVD+
Sbjct: 967 EAQNMEVLVRALLNAGLKATQIGVITPYEGQRAYITSLFQKNISYQHCL--DIEVASVDA 1024
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ------ 804
FQGREKD+I+LSCVRSN+ GIGFLNDPRRLNVALTRA+YG++I GN KVLS+Q
Sbjct: 1025 FQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVLSRQHFISKE 1084
Query: 805 ------------PLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 840
+W LL +K+ +VEG L+NLK + P K
Sbjct: 1085 KINSNETITNVNSVWVNLLNQFKKKNLIVEGCLSNLKPITINIPTPVK 1132
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 73/96 (76%), Gaps = 2/96 (2%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
+ CRYC + VV+CN +C +WFCN T GSHIV HLVR+KHKE+ LHK+S LGE
Sbjct: 237 YRCRYCEIDYVDSVVQCN--TCERWFCNGSYGTCGSHIVTHLVRSKHKEIKLHKNSVLGE 294
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCL 238
TILECYNCGCRNVFLLGF+ E VV++LCR+PCL
Sbjct: 295 TILECYNCGCRNVFLLGFLPTLEEGVVIILCRDPCL 330
>gi|50286349|ref|XP_445603.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524908|emb|CAG58514.1| unnamed protein product [Candida glabrata]
Length = 964
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/625 (56%), Positives = 449/625 (71%), Gaps = 12/625 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W + LN + +A F E +EL++ GDE+ L YSG W+
Sbjct: 255 LKESQALEHISVEWSLALNNRHLASFALSTFESSELKVAVGDEMILSYSGIQGED-WKGT 313
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G +++L + ++ LELR S+ P + GF+ +F+WK+TS+DRMQ A+K FAVD+ S
Sbjct: 314 GFIVRLPNSFKDMFTLELRPSKTPPPTHLTTGFTAEFIWKATSYDRMQTALKNFAVDKKS 373
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SGY+Y+ +LGH+V +P+ PG +LNASQ AV+ VLQRP+SLIQGPPGT
Sbjct: 374 ISGYLYYKILGHQVVDLHFDVPMPKELSLPGYTKLNASQSKAVEHVLQRPLSLIQGPPGT 433
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA+IVYH++K + ++LVCAPSN+AVD LA K+ GLKVVR+ AKSRE V S V
Sbjct: 434 GKTVTSASIVYHLSKIRKDRILVCAPSNIAVDHLAAKLRDLGLKVVRVTAKSREDVESSV 493
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH V K L KL +LK+E GELS+ D K++ +L + TE+ I + ADV+C
Sbjct: 494 SSLALHNLVAK---GAKGVLKKLLKLKEEAGELSARDTKRFISLVKKTEKSILEQADVVC 550
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGDH QLGPVI+ +K
Sbjct: 551 CTCVGAGDRRL-DMKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERK 609
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A+ AGL QSLFERL+ LG PIRL+VQYRM+P LSEFPSN FYEG+LQNGVT +R +
Sbjct: 610 ASDAGLKQSLFERLISLGHIPIRLEVQYRMNPFLSEFPSNMFYEGSLQNGVTEEQRTLAN 669
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G EE+SA+GTSYLNRTEA N E+I+T R GV P QIGVIT
Sbjct: 670 STFPWPINGIPMMFWANYGSEEMSANGTSYLNRTEAMNCERIITRLFRDGVKPEQIGVIT 729
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAY++ YM NGAL ++LY +EVASVD+FQGREKD+IILSCVR+NE Q IGFL
Sbjct: 730 PYEGQRAYVLQYMQMNGALDKELYSNVEVASVDAFQGREKDFIILSCVRANEQQMIGFLR 789
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
DPRRLNV LTRA+YG++ILGNP+ LS+ LWN LL H+++ CLVEG L NL+ V
Sbjct: 790 DPRRLNVGLTRAKYGLIILGNPRSLSRNTLWNHLLLHFRQKGCLVEGVLENLQVCTVPLT 849
Query: 837 KP---KKIYNDRRLFFGAGPGIVPN 858
+P K D FG G +PN
Sbjct: 850 RPNVKKNRSTDYNYNFGVEMGDLPN 874
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 96/136 (70%), Gaps = 7/136 (5%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ P V++CN SC KWFCNS+ T SHI+NHL+ + H V LH +S LG+
Sbjct: 46 HACAYCGIDAPTSVIKCN--SCSKWFCNSKNGTVNSHIINHLILSHHHSVSLHPESDLGD 103
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKR 262
T+LECYNCGC+NVF+LGF+SAK+E+VVVLLCR PC +S++ + T +W + +K+
Sbjct: 104 TVLECYNCGCKNVFVLGFVSAKSEAVVVLLCRIPC----AQSKNPNWDTDQWQPLIEEKQ 159
Query: 263 -VAYFVFPKEDNELRL 277
+++ P D E++L
Sbjct: 160 FLSWVAEPASDEEIKL 175
>gi|190349039|gb|EDK41614.2| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/625 (56%), Positives = 437/625 (69%), Gaps = 29/625 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MKESQ+ +++TIRW +GLNK+ +A F+ E + L++ GDE+ L Y+G P WQ
Sbjct: 234 MKESQALEHITIRWAMGLNKRHLASFILSTFETSSLKVAVGDEIILHYNGGDREP-WQGS 292
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G +++L E LEL + P + F+ +FVWK TS++RMQ A+K+FAVDE S
Sbjct: 293 GFIVRLPNAYHNEFTLELNPQKNAPPTHLTTNFTAEFVWKGTSYNRMQHALKSFAVDEKS 352
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VSGYIYH +LGH VE LP + P L LN SQ AV++VLQRP+SLIQGPPGT
Sbjct: 353 VSGYIYHRILGHNVEPVEFSFNLPEKLSIPNLTALNESQENAVRTVLQRPLSLIQGPPGT 412
Query: 417 GKTVTSAAIVYHM-----------------AKQGQGQVLVCAPSNVAVDQLAEKISATGL 459
GKT TSA I+YH+ KQ ++LVCAPSNVAVD LAEKI+ G+
Sbjct: 413 GKTFTSATIIYHLRNMINKKPSGKKSSKSKKKQTAEKILVCAPSNVAVDHLAEKIANLGV 472
Query: 460 KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKA 519
KV+RL AKSRE S V HL+LH +L L KLQ K+ +GELS+ + ++
Sbjct: 473 KVMRLTAKSREDAESSVSHLSLH----NLIVQTNKRLQKLQDKKNAEGELSAKEAVEFHK 528
Query: 520 LKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV 579
L R E+ + + +VIC TCVGAGD RL + FR VLIDESTQA+EPE +IP+V GAKQV
Sbjct: 529 LTRKAEKSVMEDCEVICSTCVGAGDHRLDSMVFRAVLIDESTQASEPEIMIPIVKGAKQV 588
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFY 639
+LVGDH QLGPVI+ KKA AGL QSLFERLV+LG PIRL+VQYRMHP LSEFPSN FY
Sbjct: 589 ILVGDHQQLGPVILHKKAGDAGLKQSLFERLVVLGHVPIRLEVQYRMHPCLSEFPSNMFY 648
Query: 640 EGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIV 699
EG+LQNGV+ R FPWPV + PM F+ G+EEISASG SYLNR EA NVEKI+
Sbjct: 649 EGSLQNGVSSESRTFKNETFPWPVLDFPMMFWANYGREEISASGYSYLNRVEAMNVEKII 708
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKD 757
T + GV QIGV+TPYEGQRAYI+ +MS G+L +++ Y E+EVASVD+FQGREKD
Sbjct: 709 TRLFKQGVKAEQIGVVTPYEGQRAYILQHMSLTGSLVDKREQYSEVEVASVDAFQGREKD 768
Query: 758 YIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
YIILSCVR+NE GIGFL+D RRLNVALTRA+YG+VI+GNP+ LSK LWN LL H++E
Sbjct: 769 YIILSCVRANETHGIGFLSDSRRLNVALTRAKYGLVIVGNPRCLSKNKLWNHLLIHFREK 828
Query: 818 ECLVEGPLNNLKQSMVQF-QKPKKI 841
CLVEGPL+NL+ SMVQ Q P I
Sbjct: 829 GCLVEGPLDNLQLSMVQLRQTPASI 853
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 83/113 (73%), Gaps = 11/113 (9%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ CVV+CN +C KWFCNS+ GSHIV+HL+ ++H+ V LH++S LG+
Sbjct: 37 HACAYCGIHATNCVVKCN--TCNKWFCNSKSGDKGSHIVSHLILSRHRIVSLHEESDLGD 94
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
T+LECYNCG +NVF+LG++SAK ESVVV+LCR PC +Q KD I WD
Sbjct: 95 TVLECYNCGNKNVFILGYVSAKQESVVVILCRLPC------AQQKD---INWD 138
>gi|50551471|ref|XP_503209.1| YALI0D23881p [Yarrowia lipolytica]
gi|49649077|emb|CAG81409.1| YALI0D23881p [Yarrowia lipolytica CLIB122]
Length = 964
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/621 (54%), Positives = 439/621 (70%), Gaps = 15/621 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKED-NELRLVPGDELRLRYSGD--AAHPAWQ 297
MKESQ + +T+ W+ LN + F D ++ GDE++L + G ++ P W
Sbjct: 258 MKESQRQSGLTVSWNRALNNNYLCTFYLNLYDLTGTKITVGDEVKLYFEGSESSSTPRWS 317
Query: 298 SVGHVIKL--TAQEEVALELRA---SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAV 352
G V+K EEV LE+R + +P +H F+++FVW ++ RMQ A+K FA
Sbjct: 318 GTGIVVKTPDNFSEEVTLEIRKGGDEKQIPTGESHPFALEFVWNDITYRRMQQALKLFAT 377
Query: 353 DETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQG 412
D+ SVSGYIYH+LLGH++ + LP +F G ELN SQV AVK VL+RP SLIQG
Sbjct: 378 DDYSVSGYIYHNLLGHDIPETFLDVPLPEQFSISGFNELNVSQVNAVKQVLRRPFSLIQG 437
Query: 413 PPGTGKTVTSAAIVYHMAK------QGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
PPGTGKTV S I+YH+A + ++LVCAPSNVAVDQLAE+I++TG+ V+RL A
Sbjct: 438 PPGTGKTVVSTTIIYHLANIRRQNPEKGSKILVCAPSNVAVDQLAERIASTGIDVLRLTA 497
Query: 467 KSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATER 526
+SRE++SS VEHLT+ + +RH D + L KL +LKDE GE S++DEK++ L++
Sbjct: 498 RSRESMSSSVEHLTIQHALRHGDHG-FTRLQKLFELKDELGEFSAADEKEFAKLEKKASE 556
Query: 527 EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
I + A+VICCTC AG+ +L N F VLIDE TQA+EPECLIPLV G KQVV VGDH
Sbjct: 557 AIIRKAEVICCTCSTAGNFKLQNLTFSAVLIDEVTQASEPECLIPLVHGCKQVVFVGDHQ 616
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNG 646
QLGPVI+ KAA AGL +SLFERL+L+G PIRL VQYRMHPSLSEFPSN FYEG+LQNG
Sbjct: 617 QLGPVILNSKAANAGLNKSLFERLILIGHVPIRLMVQYRMHPSLSEFPSNMFYEGSLQNG 676
Query: 647 VTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG 706
VT R +DFPWP P PM F+ +GQEEISASGTS+LNRTEAAN E+IVT + G
Sbjct: 677 VTTASRVLKYVDFPWPQPQHPMLFWSNLGQEEISASGTSFLNRTEAANCERIVTRLFKCG 736
Query: 707 VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS 766
V P QIGV+TPYEGQRAY+ YM +G++ + +YK +EV SVD+FQGREKD+IIL+CVRS
Sbjct: 737 VAPDQIGVVTPYEGQRAYVTQYMVSSGSVDEAMYKGVEVQSVDAFQGREKDFIILTCVRS 796
Query: 767 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLN 826
++ GIGFL+DPRRLNVALTRA+YG++ILGNP VL++ PLW L+T+++ CLVEGPL+
Sbjct: 797 SKTGGIGFLSDPRRLNVALTRAKYGLIILGNPHVLARHPLWLHLITYFRSKRCLVEGPLS 856
Query: 827 NLKQSMVQFQKPKKIYNDRRL 847
L+ +Q KP+ + R
Sbjct: 857 ALQPCNIQLPKPRPWRGNNRF 877
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 98/159 (61%), Gaps = 16/159 (10%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT-SGSHIVNHLVRAKHKEVCLHKDSPLG 201
HAC YCG S+PA VVRC + KWFCN +G + + SHIV HLV++++K V LH DS +G
Sbjct: 59 HACVYCGESSPASVVRC--LTTNKWFCNGKGGSLNSSHIVAHLVKSRNKTVALHPDSEVG 116
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIR-WDIGLNK 260
+LECYNCG NVF+LGF++AK E+VVVLLCR + ++ S S N IR W +
Sbjct: 117 SDVLECYNCGNENVFVLGFVTAKLENVVVLLCR----HCIQRSPSDANWDIREWQTLIED 172
Query: 261 KRVAYFVFP-KEDNELRLVPGDELRLRYSGDAAHPAWQS 298
++ ++ P +E R+ D ++ A AW++
Sbjct: 173 RQFLPWLVPIPRRSESRVTMADVIK-------AEEAWKT 204
>gi|254585189|ref|XP_002498162.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
gi|238941056|emb|CAR29229.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
Length = 944
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/630 (56%), Positives = 449/630 (71%), Gaps = 13/630 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ+ +++++ W +GLN + +A F E NEL++ GDE+ LRYSG + HP W
Sbjct: 253 LKESQALEHISVTWSLGLNNRHLASFALSTFESNELKIAVGDEMILRYSG-SLHPEWHGR 311
Query: 300 GHVIK--LTAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G++++ + Q+E LEL+ S+ P + GF+ +F+WK TS+DRMQ A+K FA+D+ S
Sbjct: 312 GYIVRPPNSFQDEFTLELKPSKTPPPTHLGTGFTAEFIWKGTSYDRMQDALKKFALDKKS 371
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+SG++Y+ +LGH+V LP+ F P LNASQ AV+ LQRP+SLIQGPPGT
Sbjct: 372 ISGFLYYKILGHQVVDIAFDVPLPKEFSIPFFAPLNASQSHAVEHALQRPLSLIQGPPGT 431
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH++K + ++LVCAPSNVAVD LA K+ GLKVVRL A+SRE V S V
Sbjct: 432 GKTVTSATIVYHLSKLHKDRILVCAPSNVAVDHLAAKLRMLGLKVVRLTARSREDVESSV 491
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L LH V S K EL KL +LK+E GELS D KK+ + + E +I + ADV+C
Sbjct: 492 SDLALHNLVSR---SAKGELKKLLKLKEEVGELSVKDTKKFVKMVKIAESDILKKADVVC 548
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL +F+ VLIDESTQA+EPECLIP+V GA QV+LVGDH QLGPVI+ +K
Sbjct: 549 CTCVGAGDRRLGA-KFKTVLIDESTQASEPECLIPIVKGAIQVILVGDHQQLGPVILERK 607
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A AGL QSLFERL+ LG P+RL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R
Sbjct: 608 AGDAGLKQSLFERLISLGHVPLRLEVQYRMNPHLSEFPSNMFYEGSLQNGVTIEQRTVPN 667
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP+ PM F+ G+EEISA+GTSYLNR EA N E+I+T + GV P QIGVIT
Sbjct: 668 STFPWPIHEVPMMFWANYGREEISANGTSYLNRIEAMNCERIITRLFKDGVKPEQIGVIT 727
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PYEGQRAYI+ YM NG+L LY +EVASVD+FQGREKDYIILSCVR+N+ Q IGFL+
Sbjct: 728 PYEGQRAYILQYMQMNGSLDTDLYVNVEVASVDAFQGREKDYIILSCVRANDQQSIGFLS 787
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
D RR+NV LTRA+YG+VILGNP+ LS LWN LL H++E CLVEG LNNL+ VQ
Sbjct: 788 DSRRMNVGLTRAKYGLVILGNPRALSTNVLWNNLLIHFREKGCLVEGSLNNLQLCTVQLT 847
Query: 837 KPKKIYNDR--RLFFGAGPGIVPNDISTSN 864
+ ++ R + F GP + + S+SN
Sbjct: 848 RVRQHKKGRQDKFPFNLGPEV--GEFSSSN 875
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 99/137 (72%), Gaps = 6/137 (4%)
Query: 141 TEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPL 200
+EHAC YCG+ +P+CVV+CN SCR+WFCNS+ S SHIVNHLV A H V LH +S L
Sbjct: 55 SEHACAYCGIDSPSCVVKCN--SCRRWFCNSKNGASTSHIVNHLVLAHHNVVSLHPESDL 112
Query: 201 GETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNK 260
G+T+LECYNCGC+NVFLLGF+SA+ E+VVVLLCR PC ++++ + T +W +
Sbjct: 113 GDTVLECYNCGCKNVFLLGFVSARGEAVVVLLCRIPC----AQAKNANWDTEQWQPLIEN 168
Query: 261 KRVAYFVFPKEDNELRL 277
++ +V + ++E RL
Sbjct: 169 RQFLNWVAEEPNDEERL 185
>gi|339252438|ref|XP_003371442.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
gi|316968330|gb|EFV52623.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
Length = 650
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/650 (56%), Positives = 450/650 (69%), Gaps = 30/650 (4%)
Query: 238 LNMMKESQSKDNVTIRWDIGLNKKRVAYFVFPK----------------EDNELRLVPGD 281
L KE+ S+ N+T+RW G + +R+AYFVF K E++L+ GD
Sbjct: 6 LRQSKEAYSQQNITVRWGFGPDGQRIAYFVFSKILGTGRILHKLYMQHLNVCEVKLMAGD 65
Query: 282 ELRLRYSGDAAHPAWQSVGHVIKL-TAQEEVALEL-RASQGVPVDINHGFSVDFVWKSTS 339
EL L + D W++ G V+K+ EEVA++L A+ P + +G+SV F +S
Sbjct: 66 ELIL--NSDFNGKVWKASGRVMKVPDFGEEVAIQLMNANDAPPCYVTNGYSVHFGLRSAY 123
Query: 340 FDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAV 399
DRM A++ E VS I +LGH+ E + + P + APGLPELN SQV AV
Sbjct: 124 IDRMLTALRKLT-KEDFVSHAIQRTILGHDYEAPPLDISYPNHYSAPGLPELNHSQVMAV 182
Query: 400 KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL 459
+ VL R ISLIQGPPGTGKTVTSA+IVYH+AK +LVC+PSNVA+DQLAEKIS TGL
Sbjct: 183 REVLTRSISLIQGPPGTGKTVTSASIVYHLAKARGTPILVCSPSNVAIDQLAEKISRTGL 242
Query: 460 KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKA 519
+V+R CAKSRE + SPV LTLH QVR L EK EL KL Q+K+E GELS +E ++ +
Sbjct: 243 RVIRTCAKSREKIDSPVGFLTLHQQVRRL--VEKEELGKLLQVKEETGELSPVEENRFSS 300
Query: 520 LKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV 579
LK ERE+ + ADVICCTCV AGD RLA +FR VLIDESTQA EPECLIP+V GA+QV
Sbjct: 301 LKLKYERELLKKADVICCTCVAAGDSRLAAIKFRAVLIDESTQAKEPECLIPIVTGARQV 360
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFY 639
VLVGDHCQLGPV++C++AARAGL +SLFERLV+LG +PIRLQVQYRMHP LS PSN FY
Sbjct: 361 VLVGDHCQLGPVVICEEAARAGLNRSLFERLVILGNQPIRLQVQYRMHPLLSLLPSNLFY 420
Query: 640 EGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIV 699
EGTLQNGVT ER DF WP P PMFF+ + QEE SG S+LNR EAA++EKI
Sbjct: 421 EGTLQNGVTEQERILEAGDFRWPNPTVPMFFWCTLSQEEKPRSGKSFLNRAEAAHIEKIA 480
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
T FLRSGV QIG+ITPYE QRA+IV +M +G L +LY+EIEVASVD+FQGREKD I
Sbjct: 481 TKFLRSGVRADQIGIITPYEAQRAHIVKHMLHSGPLNNKLYQEIEVASVDAFQGREKDII 540
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHEC 819
+LSCVRSN+ IGFLND RRLNVALTRARYG++I+GNPKVLS QP+WN LL +E+ C
Sbjct: 541 LLSCVRSNKDNKIGFLNDSRRLNVALTRARYGLIIVGNPKVLSHQPMWNSLLRFCRENHC 600
Query: 820 LVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADR 869
L+ GPLN LK+ V F K K + ND+ +N N +R
Sbjct: 601 LLHGPLNALKEYKVDFNKGKS-------NLPVTNTVTSNDMLLNNYNQNR 643
>gi|146411955|ref|XP_001481949.1| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/625 (56%), Positives = 435/625 (69%), Gaps = 29/625 (4%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
MKESQ+ +++TIRW +GLNK+ +A F+ E + L++ GDE+ L Y+G P WQ
Sbjct: 234 MKESQALEHITIRWAMGLNKRHLASFILSTFETSSLKVAVGDEIILHYNGGDREP-WQGS 292
Query: 300 GHVIKL--TAQEEVALELRASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G +++L E LEL + P + F+ +FVWK TS++RMQ A+K+FAVDE S
Sbjct: 293 GFIVRLPNAYHNEFTLELNPQKNAPPTHLTTNFTAEFVWKGTSYNRMQHALKSFAVDEKS 352
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
VSGYIYH +LGH VE LP + P L LN SQ AV++VLQRP+SLIQGPPGT
Sbjct: 353 VSGYIYHRILGHNVEPVEFSFNLPEKLSIPNLTALNESQENAVRTVLQRPLSLIQGPPGT 412
Query: 417 GKTVTSAAIVYHM-----------------AKQGQGQVLVCAPSNVAVDQLAEKISATGL 459
GKT TSA I+YH+ KQ ++LVCAPSNVAVD LAEKI+ G+
Sbjct: 413 GKTFTSATIIYHLRNMINKKPSGKKSSKSKKKQTAEKILVCAPSNVAVDHLAEKIANLGV 472
Query: 460 KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKA 519
KV+RL AKSRE S V HL+LH +L L KLQ K+ +GEL + + ++
Sbjct: 473 KVMRLTAKSREDAESLVSHLSLH----NLIVQTNKRLQKLQDKKNAEGELLAKEAVEFHK 528
Query: 520 LKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV 579
L R E+ + + +VIC TCVGAGD RL + FR VLIDESTQA+EPE +IP+V GAKQV
Sbjct: 529 LTRKAEKSVMEDCEVICSTCVGAGDHRLDSMVFRAVLIDESTQASEPEIMIPIVKGAKQV 588
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFY 639
+LVGDH QLGPVI+ KKA AGL QSLFERLV+LG PIRL+VQYRMHP LSEFPSN FY
Sbjct: 589 ILVGDHQQLGPVILHKKAGDAGLKQSLFERLVVLGHVPIRLEVQYRMHPCLSEFPSNMFY 648
Query: 640 EGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIV 699
EG+LQNGV+ R FPWPV + PM F+ G+EEISASG SYLNR EA NVEKI+
Sbjct: 649 EGSLQNGVSSESRTFKNETFPWPVLDFPMMFWANYGREEISASGYSYLNRVEAMNVEKII 708
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKD 757
T + GV QIGV+TPYEGQRAYI+ +M G+L +++ Y E+EVASVD+FQGREKD
Sbjct: 709 TRLFKQGVKAEQIGVVTPYEGQRAYILQHMLLTGSLVDKREQYSEVEVASVDAFQGREKD 768
Query: 758 YIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
YIILSCVR+NE GIGFL+D RRLNVALTRA+YG+VI+GNP+ LSK LWN LL H++E
Sbjct: 769 YIILSCVRANETHGIGFLSDSRRLNVALTRAKYGLVIVGNPRCLSKNKLWNHLLIHFREK 828
Query: 818 ECLVEGPLNNLKQSMVQF-QKPKKI 841
CLVEGPL+NL+ SMVQ Q P I
Sbjct: 829 GCLVEGPLDNLQLSMVQLRQTPASI 853
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 83/113 (73%), Gaps = 11/113 (9%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ CVV+CN +C KWFCNS+ GSHIV+HL+ ++H+ V LH++S LG+
Sbjct: 37 HACAYCGIHATNCVVKCN--TCNKWFCNSKSGDKGSHIVSHLILSRHRIVSLHEESDLGD 94
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
T+LECYNCG +NVF+LG++SAK ESVVV+LCR PC +Q KD I WD
Sbjct: 95 TVLECYNCGNKNVFILGYVSAKQESVVVILCRLPC------AQQKD---INWD 138
>gi|340504626|gb|EGR31053.1| upf1 regulator of nonsense transcripts, putative [Ichthyophthirius
multifiliis]
Length = 928
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/619 (53%), Positives = 432/619 (69%), Gaps = 12/619 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSG---DAAHPAW 296
+KE +++++RWD L ++VAY + P+ E+NE L+ G EL++ Y +A W
Sbjct: 164 LKEKLHYNSISVRWDTSLKNRKVAYVILPQGEENEFNLLSGSELKIIYKKMKKEANEEDW 223
Query: 297 QSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
+ G ++K+ +EV +EL G++++FVWK T+ R++ +K F DE
Sbjct: 224 IAKGTIVKVGQNDEVVIELSHHVKETPPSGKGYTIEFVWKHTAVKRIKKGIKKFWQDEQC 283
Query: 357 VSGYIYHHLLGHEVEVQMVRNT--LPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
+S ++Y +LGH+ + M T LP+ + P +PELN QV AVK LQ+P+ LIQGPP
Sbjct: 284 ISSFLYFSILGHQNQEDMPTLTIDLPQTYSLPNMPELNYYQVEAVKKALQQPLCLIQGPP 343
Query: 415 GTGKTVTSAAIVYHMA----KQGQ-GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR 469
GTGKT TS AI+YH+ + GQ GQ+LVCAPSN+ VDQLAE++ GLKVVR+C+KSR
Sbjct: 344 GTGKTFTSTAIIYHLVQNIKRTGQRGQILVCAPSNIVVDQLAERMHYAGLKVVRMCSKSR 403
Query: 470 EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREIS 529
E VSS VE LTLH QVR L E E+ KL L ++QGEL DE Y +LKR E+EI
Sbjct: 404 EMVSSSVEFLTLHNQVRSLGHGEYEEMQKLLTLMEDQGELDHQDEDVYYSLKRQGEKEIL 463
Query: 530 QSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLG 589
Q+A+VIC TC+ + DPRL FRF+ VLIDE+TQA EPECL+PL+ GAK +LVGDH QLG
Sbjct: 464 QNAEVICSTCISSADPRLKEFRFKHVLIDEATQAIEPECLLPLLKGAKHAILVGDHRQLG 523
Query: 590 PVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 649
PV+ C+ A AGL +SLFERLV +G++P RLQVQYRMHP LS FPSN+FYEGTL NGVT
Sbjct: 524 PVVTCRDTANAGLNKSLFERLVSMGVRPTRLQVQYRMHPDLSIFPSNTFYEGTLLNGVTF 583
Query: 650 NERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP 709
N+RQ G DFPWP N+P+ F G EEIS+SGTSYLNR E +E+IV ++ V P
Sbjct: 584 NDRQFHG-DFPWPNKNKPLMFLNSCGVEEISSSGTSYLNRQETMLIEEIVYKLIKGKVRP 642
Query: 710 SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEH 769
QIG+ITPY+GQR YI +Y+ +NG L LY+EIE SVD FQGREKDYII+SCVRSNE
Sbjct: 643 DQIGIITPYKGQRFYIGDYLQKNGKLNPTLYQEIECCSVDGFQGREKDYIIISCVRSNES 702
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
QGIGFL D RRLNVA+TRARYG++I+GN KVL++ LWN LL KE + LV+G LN+L+
Sbjct: 703 QGIGFLTDARRLNVAITRARYGLIIVGNAKVLARDNLWNNLLNFMKESKVLVDGNLNDLR 762
Query: 830 QSMVQFQKPKKIYNDRRLF 848
Q ++F+ +K +R F
Sbjct: 763 QCNLKFRPSQKYVPERSDF 781
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 183 HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAK-TESVVVLLCREPCLNMM 241
HLV++KHKEV LH DSP +T +ECY C +N++LLG + K E +++CR+PCLN
Sbjct: 2 HLVKSKHKEVQLHPDSPQYDTAIECYICENKNIYLLGLVHLKNNEEQGLIICRQPCLNQK 61
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFP 269
+ + +W+ +++K + ++ P
Sbjct: 62 RYGDMVWEIE-KWNPLIDEKVLVNWLVP 88
>gi|145491971|ref|XP_001431984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399091|emb|CAK64586.1| unnamed protein product [Paramecium tetraurelia]
Length = 935
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/614 (53%), Positives = 439/614 (71%), Gaps = 11/614 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFP-KEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE Q +V ++WD+ L KKR+AYF++ +E+ + + G E++L S + WQS
Sbjct: 224 VKEGQVVQSVKVKWDLSLKKKRLAYFLYGGREEFDTNTLLGSEMQL--SLKNGNYNWQSK 281
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
G VIK+ EE+ LEL + P +I G++V+ +W ST+F RMQ +KTF +S S
Sbjct: 282 GTVIKVINNEEICLELHQNDPPPNNIEEGYTVECIWVSTTFKRMQIGLKTFLTQSSSTSN 341
Query: 360 YIYHHLLGHEVEVQ--MVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
Y+Y +LG + ++P++ AP LP+LN Q AVK L+ P+SLIQGPPGTG
Sbjct: 342 YLYKMILGRIDTLAPPTAVESIPQKLSAPNLPDLNVYQADAVKKALKSPLSLIQGPPGTG 401
Query: 418 KTVTSAAIVYH----MAKQGQ-GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAV 472
KTVTSA IVY M KQ Q GQ+LVCAPSN+ VDQLAEKI+ TG+KVVRLC+K+RE+V
Sbjct: 402 KTVTSATIVYQLVKAMEKQKQRGQILVCAPSNIVVDQLAEKINKTGVKVVRLCSKTRESV 461
Query: 473 SSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSA 532
S+ +E LTLH QVR LD + +L +L D+QGEL DE+ + ++ E+EI + A
Sbjct: 462 STNIEFLTLHSQVRSLDIPQYHQLQAFYELLDQQGELDQKDEQVFIRMRDEAEKEIIEQA 521
Query: 533 DVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVI 592
D+IC TC+G+ D RL RF VLIDE+TQA EPECL+P++ GAK V+LVGDH QLGPV+
Sbjct: 522 DIICTTCIGSADKRLKEMRFLFVLIDEATQAIEPECLLPMLKGAKHVILVGDHRQLGPVV 581
Query: 593 MCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
++AA GL +SLFERLV LG++P+RLQVQYRMHP L+ FPSN+FYEGTLQNGVTI++R
Sbjct: 582 QSREAASVGLDRSLFERLVQLGIRPVRLQVQYRMHPELTVFPSNTFYEGTLQNGVTISDR 641
Query: 653 QSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQI 712
SG +FPWP +PM F GQE++SASGTSYLN EA VE+ V ++ V ++I
Sbjct: 642 THSG-NFPWPNKQKPMIFINVTGQEQLSASGTSYLNTQEAVAVEQAVYYLYQNTVKLNKI 700
Query: 713 GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGI 772
G+ITPY+GQR YI++Y+ RNG L Y++IEVASVD FQGREKD+II+SCVRSN+ QGI
Sbjct: 701 GIITPYKGQRTYILSYLQRNGQLPYNQYRDIEVASVDGFQGREKDFIIISCVRSNDTQGI 760
Query: 773 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSM 832
GFL +PRRLNV +TRARYG++++GN +VLSK LWN +L H+K+ + L+EG L NLK S
Sbjct: 761 GFLTNPRRLNVTITRARYGLIVIGNARVLSKDNLWNNMLNHFKDLDLLMEGSLPNLKSSQ 820
Query: 833 VQFQKPKKIYNDRR 846
++F+ P+K +RR
Sbjct: 821 MKFRPPQKFIPERR 834
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 19/142 (13%)
Query: 123 FEETGDDVEGFEYGKADFTEHACR---------YCGVSNPACVVRCNVPSCRKWFCNSRG 173
EET + + EH+C YC S+ V +C +C++W+CNS
Sbjct: 1 MEETIEKFRRTTEQQIQVAEHSCEQVVERLLFSYCLQSDVNAVAQC--LTCKRWYCNS-A 57
Query: 174 NTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLC 233
SGSHI+ HL++ KH ++ LH + + T +ECY C +N+F LG ++ + +++LC
Sbjct: 58 TKSGSHIILHLIKNKHSQISLHSKNKVEITTIECYGCEQKNLFTLGQVNGTNKENILILC 117
Query: 234 REPCLNMMKESQSKDNVTIRWD 255
R CL + + + I WD
Sbjct: 118 R-GCLPLRQLGE------ITWD 132
>gi|145499757|ref|XP_001435863.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402999|emb|CAK68466.1| unnamed protein product [Paramecium tetraurelia]
Length = 928
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/615 (53%), Positives = 444/615 (72%), Gaps = 13/615 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFP-KEDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE Q +V ++WD+ L KKR+AYF++ +E+ + + G E++L S + + WQS
Sbjct: 217 VKEGQVLQSVKVKWDLSLKKKRLAYFLYGGREEFDTNTLQGSEMQL--SLKSGNSIWQSK 274
Query: 300 GHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 359
G V+K+ EE+ LEL + P + + G++V+ +W ST+F RMQ +KTF ++E+S S
Sbjct: 275 GTVVKVINNEEICLELHQNDPPPNNTDEGYTVECIWVSTTFKRMQIGLKTFNLNESSTSN 334
Query: 360 YIYHHLLGHEVEV---QMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
YIY +LG + V N +P++ AP LP+LN Q AVK L+ P+SLIQGPPGT
Sbjct: 335 YIYKMILGRIDTLAPPTKVEN-IPQKLSAPNLPDLNVYQADAVKKALKSPLSLIQGPPGT 393
Query: 417 GKTVTSAAIVYHMAK-----QGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA 471
GKTVTSA IV+ + K + +GQ+LVCAPSN+ VDQLAEKI+ TG+KVVRLC+K+RE+
Sbjct: 394 GKTVTSATIVHQLVKALEKQKQRGQILVCAPSNIVVDQLAEKINKTGVKVVRLCSKTRES 453
Query: 472 VSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQS 531
VS+ +E LTLH QVR LD + +L +L D+QGEL DE+ + ++ E+EI +
Sbjct: 454 VSTTIEFLTLHNQVRSLDIPQYHQLQMFYELMDQQGELDQKDEQVFIRMRDEAEKEIIEQ 513
Query: 532 ADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
ADVIC TC+G+ D RL + RF VLIDE+TQA EPECL+P++ GA+ V+LVGDH QLGPV
Sbjct: 514 ADVICTTCIGSADKRLKDMRFPFVLIDEATQAIEPECLLPMIKGAQHVILVGDHRQLGPV 573
Query: 592 IMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE 651
+ ++AA GL +SLFERLV LG++P+RLQVQYRMHP L+ FPSN+FYEGTLQNGVTI++
Sbjct: 574 VQSREAASVGLDRSLFERLVQLGIRPVRLQVQYRMHPELTVFPSNTFYEGTLQNGVTISD 633
Query: 652 RQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ 711
R SG +FPWP +PM F GQE++SASGTSYLN EA VE+ V ++ V ++
Sbjct: 634 RTHSG-NFPWPNKQKPMIFINVQGQEQLSASGTSYLNTQEAVAVEQAVYYLYQNTVKLNK 692
Query: 712 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
IG+ITPY+GQR YI++Y+ RNG L Y++IEVASVD FQGREKD+II+SCVRSN+ QG
Sbjct: 693 IGIITPYKGQRTYIISYLQRNGQLPYNQYRDIEVASVDGFQGREKDFIIISCVRSNDTQG 752
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQS 831
IGFL +PRRLNV +TRAR+G++I+GN +VL K LWN +L H+K+ + L+EG L NLK S
Sbjct: 753 IGFLTNPRRLNVTITRARFGLIIIGNARVLCKDNLWNNMLNHFKDLDLLMEGSLPNLKPS 812
Query: 832 MVQFQKPKKIYNDRR 846
++F+ P+K +RR
Sbjct: 813 SMKFRPPQKFIPERR 827
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 12/116 (10%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
+++C YC S+ V +C C++W+CN SGSHI+ HL+++KH ++ LH+ + +
Sbjct: 20 DYSCEYCLQSDVNAVAQC--LQCKRWYCNC-ATKSGSHIILHLIKSKHSQISLHEQNKVQ 76
Query: 202 ETILECYNCGCRNVFLLGFISAKT--ESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
T +ECY C +N+F LG ++ + E +++LCR CL + K + I WD
Sbjct: 77 ITTIECYICEQKNMFTLGQVNVRVDEEENILILCR-GCLPL------KQSDKITWD 125
>gi|164659902|ref|XP_001731075.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
gi|159104973|gb|EDP43861.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
Length = 1019
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/612 (53%), Positives = 438/612 (71%), Gaps = 5/612 (0%)
Query: 229 VVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYS 288
V+L E +KE+ ++ ++T+RW+ N V + E E+RL GDEL LRY+
Sbjct: 284 VLLSVEEAYDKKIKENLAQHDITVRWEETKNMLLVWLRLPQLESGEIRLSMGDELLLRYT 343
Query: 289 GDAAHPAWQSVGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGA 346
G A PAW+S V++ T+ EVA E+ P++ + ++FVW ++ RM+ A
Sbjct: 344 GSMA-PAWESTVTVVRFSPTSSMEVACEVPKHLSPPLECTTNYMLEFVWIGITYSRMKNA 402
Query: 347 MKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRP 406
+ F+ +S Y+ LLG + ++ +PRR GLPELN SQ+ A+K+VL P
Sbjct: 403 LSRFSRGRPCMSTYLQKVLLGIPSKAIPLQVQMPRRLHVSGLPELNYSQLTALKTVLTSP 462
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
+SLIQGPPGTGKTVTSA+++YH+ + +G++LVCAPSNVAVDQL EK+ TGLKVVRL +
Sbjct: 463 LSLIQGPPGTGKTVTSASLIYHLVQMKRGKILVCAPSNVAVDQLTEKLHRTGLKVVRLVS 522
Query: 467 KSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATER 526
+ RE +SS V L LH QV ++ E +EL L + K GELS+ +E++Y++ ER
Sbjct: 523 RMRETISSQVRFLALHEQVAQVE--ENTELSHLIEQKRNNGELSTMEERRYRSQVFQRER 580
Query: 527 EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
EI +ADVIC TC + D RL ++ F+ VLIDE+TQA EPECLIP+V G +Q+VLVGDH
Sbjct: 581 EILDAADVICTTCSSSADRRLHSYEFQTVLIDEATQAVEPECLIPIVRGCRQLVLVGDHK 640
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNG 646
QLGPV++ +K A AG+ SLFERLVLLG+KP RL+VQYRMHP+LSEFPSN FY+G LQNG
Sbjct: 641 QLGPVVLNRKVADAGMNLSLFERLVLLGVKPRRLEVQYRMHPALSEFPSNMFYDGMLQNG 700
Query: 647 VTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG 706
V+ +ER + PWPVPN PM FY +GQEEISASGTSYLNRTEA++VEK+VTT L++G
Sbjct: 701 VSAHERLRRNVAIPWPVPNMPMMFYQNLGQEEISASGTSYLNRTEASSVEKLVTTLLKAG 760
Query: 707 VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS 766
V IGV+TPYEGQR +++NYM +G++ + Y+ +EVASVD+FQGREKDYII+SCVRS
Sbjct: 761 VAAEHIGVVTPYEGQRNFVINYMQLHGSMMKDAYRNVEVASVDAFQGREKDYIIVSCVRS 820
Query: 767 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLN 826
N GIGFL+DPRRLNVALTRAR+G++++GNP++L K PLW LL H+K+ LVEG L+
Sbjct: 821 NSSLGIGFLSDPRRLNVALTRARFGLILIGNPRILCKNPLWYHLLVHFKDRNLLVEGALS 880
Query: 827 NLKQSMVQFQKP 838
NL+ SMV+F P
Sbjct: 881 NLQPSMVRFGPP 892
Score = 146 bits (368), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 102/165 (61%), Gaps = 7/165 (4%)
Query: 124 EETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNH 183
EE +D E + EHAC YCG+++ CV++C V C KWFCN G T+ SHIV H
Sbjct: 78 EEREEDKEAPTEPEEILPEHACAYCGLADVDCVIKCTV--CNKWFCNGSGKTTSSHIVTH 135
Query: 184 LVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKE 243
LVRA+HK V LH SPLG+T+ ECY CG +N F+LGF+ AK E+VV+LLCR PC N
Sbjct: 136 LVRARHKAVMLHPMSPLGDTVPECYTCGSKNPFVLGFLPAKGEAVVMLLCRTPC-NFAAN 194
Query: 244 SQSKDNVTIRWD-IGLNKKRVAYFV-FP--KEDNELRLVPGDELR 284
++ D +W + N+ +++FV P K+ R + D++R
Sbjct: 195 TKDMDWDASQWSPLIENRAFLSWFVKIPSLKQQKSARQITSDQIR 239
>gi|380478203|emb|CCF43724.1| ATP-dependent helicase NAM7, partial [Colletotrichum higginsianum]
Length = 555
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/529 (61%), Positives = 393/529 (74%), Gaps = 40/529 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KE+QS+D +T+RWD GLN K + F K E +++L GDE+RLRY G+ PAW+ V
Sbjct: 61 LKEAQSEDGLTVRWDYGLNNKHLVSFELHKIESGDVKLAVGDEMRLRYKGEL-RPAWEGV 119
Query: 300 GHVIKL--TAQEEVALELRAS---QGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDE 354
G+VIK+ +EV LELR + + VP + H FS D+VWK+TS+DRMQ AMKTFAVD+
Sbjct: 120 GYVIKIPNNQSDEVTLELRKAGNEKQVPTECTHNFSADYVWKATSYDRMQYAMKTFAVDD 179
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
SVSGYI+H LLGH+V V ++ T+P++F PGLP+LN SQ+ A+K+VL P+SLIQGPP
Sbjct: 180 MSVSGYIFHKLLGHDVAVAPMKTTMPKKFSVPGLPDLNTSQIAAIKAVLSTPLSLIQGPP 239
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA I+YH+ K GQVLVCAPSNVAVDQL E+I TGLKVVRL AKSRE V S
Sbjct: 240 GTGKTVTSATIIYHLCKMNNGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES 299
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
LSS DEKK+K L +A ER+I +ADV
Sbjct: 300 ---------------------------------SLSSQDEKKFKQLTKAAERDILHNADV 326
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+CCTCVGAGDPRL+ +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGDH QLGPVIM
Sbjct: 327 VCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 386
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
KKAA+AGL QSLFERLV L L PIRL +QYRMHP LSEFPSN FY+G+LQNGVT+ +R
Sbjct: 387 KKAAKAGLNQSLFERLVNLRLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTVKDRVR 446
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
+DFPWPV + PM F+ +G EEISASGTSYLNRTEA+NVEK+VT F ++GV P IGV
Sbjct: 447 RDVDFPWPVVDMPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPLDIGV 506
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSC 763
ITPYEGQR+YIV+ M G +++ YKE+EVASVD+FQGREKD+I+LSC
Sbjct: 507 ITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSC 555
>gi|196001321|ref|XP_002110528.1| hypothetical protein TRIADDRAFT_54641 [Trichoplax adhaerens]
gi|190586479|gb|EDV26532.1| hypothetical protein TRIADDRAFT_54641 [Trichoplax adhaerens]
Length = 1070
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/649 (51%), Positives = 435/649 (67%), Gaps = 83/649 (12%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFP--KEDNELRLVPGDELRLRYSGDAAHPAWQS 298
+K++ ++ NV +RWD LNKKR+AYF P ++DN+
Sbjct: 317 LKQNLAQKNVKVRWDQRLNKKRLAYFSLPDLQDDND------------------------ 352
Query: 299 VGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
EV LEL+++ VP F V+FVWK+TSFDRM+ A+ FA+D+TS++
Sbjct: 353 -----------EVGLELKSNFDVPESCKEPFEVEFVWKATSFDRMRAAVHKFAIDKTSMN 401
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GY+YH LLGH VE + + LP+R GLPELN SQ A+K+VLQ+P+SLIQGPPGTGK
Sbjct: 402 GYLYHRLLGHLVEERPISCKLPKRIAVSGLPELNDSQRTAIKNVLQKPLSLIQGPPGTGK 461
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS--ATGLKVVRLCAKSREAVSSPV 476
TVTSAA+VYH+ + + D+L I L+V+RLCA+SRE + S V
Sbjct: 462 TVTSAALVYHLVNINRWYE--------SYDRLYPNIKPELIHLRVIRLCARSRETLDSSV 513
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L+LH Q+ ++T E +L KLQQL++EQGELSSSD+ Y+ L+ E+E+ Q ADVIC
Sbjct: 514 SMLSLHNQILRMETPEGMKLRKLQQLREEQGELSSSDDALYRQLRNTCEKELLQHADVIC 573
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTCVGAGD RL F FR +LIDE+TQATEPEC+IP+V GAKQ +LVGDHCQLGPV+MCKK
Sbjct: 574 CTCVGAGDRRLTGFTFRVILIDEATQATEPECMIPIVRGAKQCILVGDHCQLGPVVMCKK 633
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER---- 652
AA AGLAQSLF RLV LG++PIRL VQYRMHP LSEFPS FYEG LQNGV I+ +
Sbjct: 634 AAGAGLAQSLFARLVALGVRPIRLTVQYRMHPDLSEFPSFHFYEGALQNGVAIDRKGLPT 693
Query: 653 ---------------------------QSSGIDFPWPVPNRPMFFYVQMGQEEISASGTS 685
+S +D NRPMFF+ G EE A+G+S
Sbjct: 694 ITASGNNSKEVQQDQANVTLSDSESSPESLIVD-----RNRPMFFWNTQGTEEPGATGSS 748
Query: 686 YLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV 745
YLNR+EA +VEKI+T FLR+G+ P QIGVITPYE QRAY+V M G+++ LY+++EV
Sbjct: 749 YLNRSEAESVEKIITCFLRTGIKPEQIGVITPYESQRAYVVTLMKTRGSMQDDLYQKVEV 808
Query: 746 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 805
ASVD+FQGREKDYIILSCVRSNE+QGIGFLNDPRRLNV++TRA+ G++I+GN +VL+K P
Sbjct: 809 ASVDAFQGREKDYIILSCVRSNEYQGIGFLNDPRRLNVSITRAKNGLIIIGNARVLAKHP 868
Query: 806 LWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGAGPG 854
LW L+ + K+ C +EG LNNL++ ++ P+K + + +G PG
Sbjct: 869 LWYNLIDYMKDKHCFMEGSLNNLRECNMRLPVPRKKASKVQSSYGLLPG 917
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 121/181 (66%), Gaps = 13/181 (7%)
Query: 106 SSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCR 165
+S+ + + + M L+FE+ D+ +GF Y K HAC YCG+ +PA VV CN +C+
Sbjct: 83 ASDNLLTNVTDKMVDLNFEDDEDEEDGF-YKKERLL-HACSYCGIHDPAAVVMCN--TCK 138
Query: 166 KWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKT 225
+WFCN RG TSGSHI+NHLVRAKH+EV LHKD PLGET+LECYNC CRN+F+LG+I AK+
Sbjct: 139 RWFCNGRGTTSGSHIINHLVRAKHREVTLHKDGPLGETVLECYNCACRNIFVLGYIPAKS 198
Query: 226 ESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRL 285
+SVVVLLCR PC + K SKD+ WD + + F K L VP D+ ++
Sbjct: 199 DSVVVLLCRHPCATLTK---SKDD---DWDQSQWQSLIDEKCFRK---WLVKVPSDQEQM 249
Query: 286 R 286
R
Sbjct: 250 R 250
>gi|307104875|gb|EFN53127.1| hypothetical protein CHLNCDRAFT_137486 [Chlorella variabilis]
Length = 949
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/875 (47%), Positives = 511/875 (58%), Gaps = 148/875 (16%)
Query: 105 NSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHAC--------RYCGVSNPACV 156
+S T Q +G A L G DV E D E A YCG+ NPACV
Sbjct: 56 QASQVPTFQPTQGDAAL-----GLDVALGELAFQDAAEEAAPEQPTELPDYCGIHNPACV 110
Query: 157 VRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVF 216
V+C + KWFCN R + S I+ HLV+AK KEV LHKDSPLGET+LECY+ G RNVF
Sbjct: 111 VKC--LTTGKWFCNGRVTGTASCIITHLVKAKLKEVGLHKDSPLGETVLECYSSGSRNVF 168
Query: 217 LLGFISAKTESVVVLLCRE--------PCLNM-MKESQS--KDNVTIRWDIG-------L 258
LGF+ K E+ VVLL R+ LN+ M + Q +D + W + L
Sbjct: 169 ALGFVPLKDENTVVLLARDTPPAAPGIKDLNIDMTQWQPLIEDRAFVAWLVKAPGEHEVL 228
Query: 259 NKKRVAYFVFPKEDNELRLVPG---DELR------------LRYSGDAAHPAWQSVGHVI 303
+ ++ + + R PG +EL LRY D A+ G +I
Sbjct: 229 RARHLSVHQVTRLEEVWRSNPGASVEELSQPGKEEEPCPVALRY--DDAYQYQNIFGPLI 286
Query: 304 KLTAQEEVAL---ELRASQGV--PVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
KL A + A+ ++R + V V +N F + S D
Sbjct: 287 KLEADYDKAMKENQVRENVTVHWGVGLNKKVVARFYYPKDSAD----------------- 329
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQR-PISLIQGPPGTG 417
++G E+ + R+ PR G+P P + V + + I L G G
Sbjct: 330 ---MRLMIGDELRL---RHPCPRA-GSP--PWVGIGFVSRLDDASEEVAIELRGKEKGQG 380
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
T + +AK GQGQVLV APSN+AVD LAE+ S TGL+VVRL A+SREAV++ VE
Sbjct: 381 SAPTDVTTGF-LAKMGQGQVLVSAPSNIAVDHLAERTSQTGLRVVRLQARSREAVATTVE 439
Query: 478 HLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICC 537
HLTLHYQV HLD E EL KL+ LK+E GEL+++DE+KYKALKR+ EREI Q+ADV+C
Sbjct: 440 HLTLHYQVEHLDIPEAQELRKLRLLKEELGELAAADERKYKALKRSLEREILQAADVVCA 499
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TC G GD RL NFRFR++LIDE+TQA EPE +IPLV+GAKQ++LVGDHCQLGPVI+ K A
Sbjct: 500 TCAGVGDSRLTNFRFRRLLIDEATQAVEPEAMIPLVMGAKQLILVGDHCQLGPVIINKVA 559
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
ARAGL+QSLFERL+LLG+KPIRL V EFPSN+FYEG LQNGVT+ ER + +
Sbjct: 560 ARAGLSQSLFERLMLLGVKPIRLAVH--------EFPSNTFYEGALQNGVTVAERTRTNV 611
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
FPWP ++P FYVQ+G EEISASGTSYLNRTEAA+VEKIVT L+SGV P+QIG+ITP
Sbjct: 612 LFPWPT-DKPCMFYVQLGAEEISASGTSYLNRTEAASVEKIVTYLLKSGVSPAQIGIITP 670
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQRA++V M+R+G +RQ LY EIE ASVDSFQGREKDYIILSCVRSNEHQGIGFL D
Sbjct: 671 YEGQRAHVVTVMTRSGPMRQALYAEIECASVDSFQGREKDYIILSCVRSNEHQGIGFLAD 730
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
PRRLNVALTRA+YG+V GPL NLKQSMVQ Q+
Sbjct: 731 PRRLNVALTRAKYGLV-----------------------------GPLTNLKQSMVQLQR 761
Query: 838 PKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPG--------PPNGTHKP 889
P+++++ FG G + T P+ R SR + P G PP GT
Sbjct: 762 PRRLFDAGS--FGLGGALSTRFRPTEAPSC-LRDSR---FTPAGERHEELGPPPPGTANS 815
Query: 890 GLH-------PAGFPMPRVPLPPFQGGPPSQPYAI 917
G + G+ R LP P S PY I
Sbjct: 816 GGYGGSRDNLDGGYAYER-SLP-----PSSNPYTI 844
>gi|320580629|gb|EFW94851.1| ATP-dependent helicase NAM7 [Ogataea parapolymorpha DL-1]
Length = 909
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/619 (53%), Positives = 422/619 (68%), Gaps = 12/619 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-ELRLVPGDELRLRYSGDAAHPAWQSV 299
+K+SQS + +T+ W +G N +A F D ++L GD++ LRY+G W+
Sbjct: 212 LKQSQSLERLTVTWSLGTNDLHLATFALQSYDTLGMKLAVGDQMILRYNGSELAEPWEQS 271
Query: 300 GHVIKL--TAQEEVALELRASQG--VPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDET 355
G ++++ +E LEL S+ VP ++ GF+ + VWK TS+ RMQ A+K AV++
Sbjct: 272 GFIVRIPSATRETFTLELIDSKNKSVPTHLHTGFTAELVWKGTSYARMQDALKKLAVNKK 331
Query: 356 SVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPG 415
SVS +IY+ L+G + R + + P +LNASQ A+ +VL +P+SLIQGPPG
Sbjct: 332 SVSEHIYYALMGIDAPSIEFRVKKKKSYSIPNFAKLNASQENAIHNVLSKPLSLIQGPPG 391
Query: 416 TGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSP 475
TGKTVTSA IVY + K +GQ+LVCAPSN+AVD LA K+ GL+V+RL AKSRE V S
Sbjct: 392 TGKTVTSATIVYQLTKLHKGQILVCAPSNIAVDHLASKLEQLGLRVLRLIAKSREDVESS 451
Query: 476 VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVI 535
V+HL+L Q+R +L +L LK++ GELS+S K+ +L E + VI
Sbjct: 452 VQHLSLTEQMRK---HASKDLKRLLALKEKNGELSASQYKQMASLLYKEEALLMDKCQVI 508
Query: 536 CCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
CCTCVGAGD RLA +FR VLIDESTQA+EPECLIP+V GA QV+LVGDH QLGPVI+ +
Sbjct: 509 CCTCVGAGDRRLAKRKFRTVLIDESTQASEPECLIPIVKGANQVILVGDHQQLGPVILSR 568
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
KA AGL QSLFERL+ LG PIRL+VQYRMHP LSEF SN FY+G+LQNGVT R
Sbjct: 569 KAGDAGLRQSLFERLIYLGHMPIRLEVQYRMHPCLSEFSSNVFYDGSLQNGVTAESRSRP 628
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
FPWP+ PM F+ G+EE+SASGTSYLNRTEA N EKI+T L+ GV P +IGVI
Sbjct: 629 DSTFPWPIREIPMMFWAVFGREELSASGTSYLNRTEAMNCEKIITRLLKEGVDPGKIGVI 688
Query: 716 TPYEGQRAYIVNYMSRNGALRQQ-LYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
TPY GQ +IV YM NG + + Y E+EVASVDSFQGREKDYIILSCVR+N++Q IGF
Sbjct: 689 TPYAGQATFIVQYMEMNGLIADKSRYSEVEVASVDSFQGREKDYIILSCVRANDNQLIGF 748
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ 834
L+DPRRLNVALTRAR+G+ ILGNPK LSK P+WN LL H++E CLV+G L NLK +
Sbjct: 749 LSDPRRLNVALTRARFGMAILGNPKTLSKNPMWNRLLMHFREKGCLVDGSLENLKLCNIP 808
Query: 835 FQKPKKIYNDRRLFFGAGP 853
+ + N FG P
Sbjct: 809 LSRGGQATNGE---FGLAP 824
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 8/144 (5%)
Query: 144 ACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGET 203
AC YCG+S P +V+CN +C KWFCN + + +GSHI+ H V +KH+ + LH DS LG+T
Sbjct: 17 ACAYCGISEPDSLVKCN--TCEKWFCNGKTSGAGSHIITHTVLSKHQSLSLHPDSELGDT 74
Query: 204 ILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWDIGLNKKRV 263
+LECYNCG RN+F+LGF+SAKT+SVVV+LCR PC +S++ + T W + + +
Sbjct: 75 MLECYNCGNRNIFVLGFVSAKTDSVVVILCRLPC----AQSKNVEWNTANWQSLIEDRAL 130
Query: 264 AYFVF--PKEDNELRLVPGDELRL 285
+V P E+ +L P L++
Sbjct: 131 LPWVAKPPSEEEKLEAQPITSLQI 154
>gi|163915642|gb|AAI57562.1| LOC100135270 protein [Xenopus (Silurana) tropicalis]
Length = 587
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/598 (57%), Positives = 420/598 (70%), Gaps = 59/598 (9%)
Query: 453 KISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
KI TGLKVVRLCAKSREA+ SPV L LH Q+R++++ EL KLQQLKDE GELSS+
Sbjct: 1 KIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMES--MPELQKLQQLKDETGELSSA 58
Query: 513 DEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL 572
DEK+Y+ALKR ERE+ +ADVICCTCVGAGDPRLA +FR +LIDESTQATEPEC++P+
Sbjct: 59 DEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPV 118
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
VLGAKQ++LVGDHCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PIRLQVQYRMHP+LS
Sbjct: 119 VLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSA 178
Query: 633 FPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEA 692
FPSN FYEG+LQNGVT +R G DF WP P++PMFFYV GQEEI++SGTSYLNRTEA
Sbjct: 179 FPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEA 238
Query: 693 ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQ 752
ANVEKI T L++G P QIG+ITPYEGQR+Y+V YM +G+L +LY+E+E+ASVD+FQ
Sbjct: 239 ANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQ 298
Query: 753 GREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLT 812
GREKD+IILSCVR+NEHQGIGFLNDPRRLNVALTRARYG++I+GNPK LSKQPLWN LL
Sbjct: 299 GREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLN 358
Query: 813 HYKEHECLVEGPLNNLKQSMVQFQKPKKIYND--------RRLFFGAGPGIVPNDISTSN 864
+YKE + LVEGPLNNL++S++QF KP+K+ N + A I+P +
Sbjct: 359 YYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYD-- 416
Query: 865 PNADRRGSRARGYMPPGPPNGTHKP----GLHPAGFPMPRVPLPPFQGGPPSQPYAIPSR 920
R S+ R P TH G P+ +P+P PP
Sbjct: 417 -----RSSQGR---PSNMYFQTHDQIGMIGSGPSHVTAMNIPIPFNLVMPP--------- 459
Query: 921 GAVHGPVGAVHHVPPPGSRGFGAGRGSA---GAPIGSHLQHQQNTQQPIGTIG-STFNFP 976
+PPPG FG G A G P G + + Q+ IG G S N P
Sbjct: 460 ------------MPPPGY--FGQANGPAPGRGMPKGKATRGGRQKQRGIGLPGMSQGNMP 505
Query: 977 SLENSN---SQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVGSMSQD-FLGDDFKSQ 1030
+ + S SQP GPLTQ G+++ + PSQ + G S +SQD +LGD+FKSQ
Sbjct: 506 NSQASQDVVSQPFSQGPLTQ-GYIS---MSQPSQMSQPGLSQPELSQDSYLGDEFKSQ 559
>gi|294875682|ref|XP_002767434.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869001|gb|EER00152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 559
Score = 634 bits (1634), Expect = e-178, Method: Compositional matrix adjust.
Identities = 301/477 (63%), Positives = 374/477 (78%), Gaps = 18/477 (3%)
Query: 380 PRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLV 439
P+ + AP LP+LN SQV AV+ L++P+SLIQGPPGTGKTVTSA I+YH+A+Q QGQVLV
Sbjct: 5 PKNWTAPNLPQLNHSQVQAVQKALEQPLSLIQGPPGTGKTVTSATIIYHLARQHQGQVLV 64
Query: 440 CAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKL 499
APSN+AVDQLAEKI TGLKVVR+ AKSRE + SPVE L+LH Q+R++ T + E KL
Sbjct: 65 TAPSNIAVDQLAEKIHLTGLKVVRILAKSRECLYSPVEFLSLHTQIRNMRTPQAKEFKKL 124
Query: 500 QQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDE 559
LK+E GEL+SSDEK+++ L+ ERE+ ++ADVIC TC GAGDPRL RF+ VL+DE
Sbjct: 125 FDLKEEVGELTSSDEKRFRILRSQVERELLENADVICTTCAGAGDPRLGKLRFKMVLVDE 184
Query: 560 STQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR 619
+TQA EPE LIP+ GAKQV+LVGDH QLGPV+MCKKAA+AG QSLFERL+ LG++PIR
Sbjct: 185 ATQACEPEALIPICNGAKQVILVGDHKQLGPVVMCKKAAKAGFKQSLFERLIALGVRPIR 244
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEI 679
L+VQYRMHPSL+EFPS +FY+G LQNG+T+ +RQ SG+ FPWP PMFFY GQEEI
Sbjct: 245 LEVQYRMHPSLAEFPSQTFYDGCLQNGITMEDRQVSGVKFPWPREEMPMFFYNSTGQEEI 304
Query: 680 SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 739
SASGTSYLNR+EA N+EKI+T FLR+G+ SQIGV+TPYEGQRAYI + R L ++
Sbjct: 305 SASGTSYLNRSEAINIEKIITYFLRAGLKGSQIGVVTPYEGQRAYIQQVLQRQTTLSAKM 364
Query: 740 YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 799
Y+ IE+ASVD+FQGREKD+I+LSCVRSN+ G+GFLNDPRRLNVALTRARYG+VI GN +
Sbjct: 365 YESIEIASVDAFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLNVALTRARYGLVICGNAQ 424
Query: 800 VLSKQ------------------PLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
VL++ +WNGLL+H K+ + +VEGPL+ L+QS +Q P
Sbjct: 425 VLARATTVGHQGRGRMTVIRSMPSVWNGLLSHMKKFDLIVEGPLSALRQSHIQIDDP 481
>gi|401402591|ref|XP_003881287.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
gi|325115699|emb|CBZ51254.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
Length = 1428
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 335/729 (45%), Positives = 444/729 (60%), Gaps = 133/729 (18%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-ELRLVPGDELRLR------------- 286
MK+ Q V +RW+ GLN++R+AYF++ +++ +R+ GDE+++
Sbjct: 406 MKDGQKLVRVKLRWEQGLNRRRLAYFMYARDEGCNVRVAAGDEVKISTMLPKSVLAASSA 465
Query: 287 ----------------------------------YSGDAAHPAWQSVGHVIKLTAQ-EEV 311
GDA W G + + + EEV
Sbjct: 466 PATSSGAGSQGSGGAHGHDATSPNGTSDGGARGGLEGDANLVEWSCTGSITRFSEDSEEV 525
Query: 312 ALELRASQGV------PVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHL 365
+E++ V PV + ++++FVWKSTSF+RMQ A++ AVDE SVS Y+YH L
Sbjct: 526 IVEVKKPPNVKGAWDSPVPLL--YTIEFVWKSTSFERMQAALRQLAVDEISVSSYLYHTL 583
Query: 366 LGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAI 425
+G ++E Q+++ +P + AP L LN SQ+ A++ LQ P+SLIQGPPGTGKT+TS+ +
Sbjct: 584 MGKQMEHQIIQTPMPLQISAPNLAPLNPSQMLAIRYALQHPLSLIQGPPGTGKTLTSSTL 643
Query: 426 VYHMAKQGQ-----------------GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKS 468
VY M K + GQVLV APSNVAVDQLAE+I+ TGLKV+R+ +KS
Sbjct: 644 VYQMVKLSEMGSHVHPRGTGGFNKDGGQVLVVAPSNVAVDQLAERINRTGLKVIRMYSKS 703
Query: 469 REAVSSPV-----EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRA 523
RE +S + EHL LH +V L T+ E+ K QLK++ GEL+++DE++ + L
Sbjct: 704 REGAASSLTSFCMEHLALHKKVLELKTAGSDEMAKYLQLKEQTGELAAADERRLRLLISR 763
Query: 524 TEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVG 583
E EI Q+ADVIC TCVGAGD RL FRFRQV+IDE+ QATEPECLIP+VLGAKQVVL+G
Sbjct: 764 AEMEILQTADVICTTCVGAGDNRLQGFRFRQVVIDEAAQATEPECLIPIVLGAKQVVLIG 823
Query: 584 DHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTL 643
DHCQLGPV++ KKAA AGLA SLF RL+ LG +P+RL+VQYRMHP+LS FPS FYEG L
Sbjct: 824 DHCQLGPVVLSKKAAAAGLATSLFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFYEGEL 883
Query: 644 QNGVTINERQS-----SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKI 698
QNGVT+ ER FPWP RPMFFY EEIS SGTSY+NR EA+N+EKI
Sbjct: 884 QNGVTMTERTYFHRGPGEHRFPWPSEERPMFFYHSTASEEISGSGTSYVNRVEASNIEKI 943
Query: 699 VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
VT L+ G+ SQIGVITPY+GQRA+I + R L Q + ++EVASVD+FQGREKD+
Sbjct: 944 VTFLLKCGLKASQIGVITPYDGQRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDF 1003
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS---------------- 802
I+LSCVRSN + GIGFL D RRLNVA+TRA+YG++I GN VL+
Sbjct: 1004 ILLSCVRSNSNTGIGFLADSRRLNVAMTRAKYGLIICGNASVLANYMPRVARPPAGSASL 1063
Query: 803 ---------------------------------KQPLWNGLLTHYKEHECLVEGPLNNLK 829
+ P+W L+ HY +++ +V+GPL+NLK
Sbjct: 1064 QGSGAAGATSNALGPGGVAVGPGAAALPGTFVPEPPIWRLLIHHYLKYDLVVDGPLSNLK 1123
Query: 830 QSMVQFQKP 838
S ++ P
Sbjct: 1124 PSKIRITLP 1132
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 83/127 (65%), Gaps = 12/127 (9%)
Query: 134 EYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNS----RGNTSGSHIVNHLVRAKH 189
E D EHAC YCG S+P CV++C C K+FCNS G++ GSHI+ HLV+++H
Sbjct: 193 EKTTKDVPEHACSYCGASSPECVLKCCC--CNKYFCNSPCSVSGSSMGSHIIFHLVKSRH 250
Query: 190 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDN 249
+EV LH + PLG+ LEC+ CG RNVFLLG I A+ E VVVL+CREPCL+ QS
Sbjct: 251 REVMLHPEGPLGDCTLECFQCGSRNVFLLGLIPAEQEGVVVLICREPCLSSSALKQSG-- 308
Query: 250 VTIRWDI 256
WD+
Sbjct: 309 ----WDL 311
>gi|237838453|ref|XP_002368524.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
gi|211966188|gb|EEB01384.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
Length = 1449
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 336/730 (46%), Positives = 445/730 (60%), Gaps = 134/730 (18%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-ELRLVPGDELRLR------------- 286
+K+ Q V +RW+ GLN++R+AYF++ +++ +R+ GDE+++
Sbjct: 400 IKDGQKLVRVKLRWEQGLNRRRLAYFMYSRDEGCNVRVAAGDEVKISTVLPKSVLSGASS 459
Query: 287 ---------------YS------------------GDAAHPAWQSVGHVIKLTAQ-EEVA 312
YS GD W G + + + EEV
Sbjct: 460 SAPASSGGSHGSGCTYSNEATSSNGVGSGGTAGLEGDGNFVQWSCTGSITRFSEDSEEVI 519
Query: 313 LELR------ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLL 366
+E++ + PV + ++++FVWKSTSF+RMQ A++ AVDE SVS Y+YH L+
Sbjct: 520 VEVKKPPNAKGAWDSPVPLL--YTIEFVWKSTSFERMQAALRQLAVDEISVSSYLYHTLM 577
Query: 367 GHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV 426
G ++E Q+++ +P + AP L LN SQ+ A++ LQ P+SLIQGPPGTGKT+T + +V
Sbjct: 578 GKQMEHQIIQTPMPLQISAPNLAPLNPSQMLAIRYALQHPLSLIQGPPGTGKTLTCSTLV 637
Query: 427 YHMAKQGQ-----------------GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR 469
Y M K + GQVLV APSNVAVDQLAE+I+ TGLKV+R+ +KSR
Sbjct: 638 YQMVKLSEVGSHIHPRCAGRVNKEGGQVLVVAPSNVAVDQLAERINRTGLKVIRMYSKSR 697
Query: 470 EAVSSP-----VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRAT 524
E SS VE+L LH +V L T E+ K QLK++ GEL+++DE++ + L
Sbjct: 698 EGASSSLTSFCVENLALHKKVLELKTGSSDEMAKYIQLKEQTGELAAADERRLRLLISRA 757
Query: 525 EREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 584
E EI Q+ADVIC TCVGAGD RL FRFRQV+IDE+ QATEPECLIP+VLGAKQVVL+GD
Sbjct: 758 EMEILQTADVICTTCVGAGDNRLQGFRFRQVVIDEAAQATEPECLIPIVLGAKQVVLIGD 817
Query: 585 HCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
HCQLGPV++ KKAA AGLA SLF RL+ LG +P+RL+VQYRMHP+LS FPS FYEG LQ
Sbjct: 818 HCQLGPVVLSKKAAAAGLATSLFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFYEGELQ 877
Query: 645 NGVTINER----QSSGID-FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIV 699
NGVT+ ER Q G FPWP RPMFFY EEIS SGTSY+NR EA+N+EKIV
Sbjct: 878 NGVTMTERTYFHQGPGDHRFPWPNEERPMFFYHSTASEEISGSGTSYVNRVEASNIEKIV 937
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
T L+ G+ SQIGVITPY+GQRA+I + R L Q + ++EVASVD+FQGREKD+I
Sbjct: 938 TFLLKCGLKASQIGVITPYDGQRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFI 997
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS----------------- 802
+LSCVRSN + GIGFL D RRLNVA+TRA+YG++I GN VL+
Sbjct: 998 LLSCVRSNSNTGIGFLADSRRLNVAMTRAKYGLIICGNATVLANYMPRVARPPGAPAAPP 1057
Query: 803 ----------------------------------KQPLWNGLLTHYKEHECLVEGPLNNL 828
+ P+W L+ HY +++ +V+GPL+NL
Sbjct: 1058 PGSGTTGLPGNALGPCGVQVGPGASTLSGTPCVPEPPIWRLLIHHYLKYDLVVDGPLSNL 1117
Query: 829 KQSMVQFQKP 838
K S ++ P
Sbjct: 1118 KPSKIRITLP 1127
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 91/142 (64%), Gaps = 7/142 (4%)
Query: 117 GMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNS----R 172
G AG EE +D + EHAC YCG S+P CV++C C K+FCNS
Sbjct: 170 GDAGEPREELKEDHGRGGKATKEIPEHACSYCGASSPDCVLKCCC--CNKYFCNSPCSAS 227
Query: 173 GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLL 232
G++ GSHI+ HLV+++H+EV LH + PLG+ LEC+ CG RNVFLLG I A+ E VVVL+
Sbjct: 228 GSSMGSHIIFHLVKSRHREVMLHPEGPLGDCTLECFQCGSRNVFLLGLIPAEQEGVVVLI 287
Query: 233 CREPCLNMMKESQSKDNVTIRW 254
CREPCL+ QS ++T +W
Sbjct: 288 CREPCLSSGALKQSGWDLT-QW 308
>gi|221484204|gb|EEE22500.1| regulator of nonsense transcripts 1 protein, putative [Toxoplasma
gondii GT1]
Length = 1449
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 336/730 (46%), Positives = 445/730 (60%), Gaps = 134/730 (18%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-ELRLVPGDELRLR------------- 286
+K+ Q V +RW+ GLN++R+AYF++ +++ +R+ GDE+++
Sbjct: 400 IKDGQKLVRVKLRWEQGLNRRRLAYFMYSRDEGCNVRVAAGDEVKISTVLPKSVLSGASS 459
Query: 287 ---------------YS------------------GDAAHPAWQSVGHVIKLTAQ-EEVA 312
YS GD W G + + + EEV
Sbjct: 460 SAPASSGGSHGSGCTYSNEATSSNGVGSGGTAGLEGDGNFVQWSCTGSITRFSEDSEEVI 519
Query: 313 LELR------ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLL 366
+E++ + PV + ++++FVWKSTSF+RMQ A++ AVDE SVS Y+YH L+
Sbjct: 520 VEVKKPPNAKGAWDSPVPLL--YTIEFVWKSTSFERMQAALRQLAVDEISVSSYLYHTLM 577
Query: 367 GHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV 426
G ++E Q+++ +P + AP L LN SQ+ A++ LQ P+SLIQGPPGTGKT+T + +V
Sbjct: 578 GKQMEHQIIQTPMPLQISAPNLAPLNPSQMLAIRYALQHPLSLIQGPPGTGKTLTCSTLV 637
Query: 427 YHMAKQGQ-----------------GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR 469
Y M K + GQVLV APSNVAVDQLAE+I+ TGLKV+R+ +KSR
Sbjct: 638 YQMVKLSEVGSHIHPRCAGRVNKEGGQVLVVAPSNVAVDQLAERINRTGLKVIRMYSKSR 697
Query: 470 EAVSSP-----VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRAT 524
E SS VE+L LH +V L T E+ K QLK++ GEL+++DE++ + L
Sbjct: 698 EGASSSLTSFCVENLALHKKVLELKTGSSDEMAKYIQLKEQTGELAAADERRLRLLISRA 757
Query: 525 EREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 584
E EI Q+ADVIC TCVGAGD RL FRFRQV+IDE+ QATEPECLIP+VLGAKQVVL+GD
Sbjct: 758 EMEILQTADVICTTCVGAGDNRLQGFRFRQVVIDEAAQATEPECLIPIVLGAKQVVLIGD 817
Query: 585 HCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
HCQLGPV++ KKAA AGLA SLF RL+ LG +P+RL+VQYRMHP+LS FPS FYEG LQ
Sbjct: 818 HCQLGPVVLSKKAAAAGLATSLFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFYEGELQ 877
Query: 645 NGVTINER----QSSGID-FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIV 699
NGVT+ ER Q G FPWP RPMFFY EEIS SGTSY+NR EA+N+EKIV
Sbjct: 878 NGVTMTERTYFHQGPGDHRFPWPNEERPMFFYHSTASEEISGSGTSYVNRIEASNIEKIV 937
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
T L+ G+ SQIGVITPY+GQRA+I + R L Q + ++EVASVD+FQGREKD+I
Sbjct: 938 TFLLKCGLKASQIGVITPYDGQRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFI 997
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS----------------- 802
+LSCVRSN + GIGFL D RRLNVA+TRA+YG++I GN VL+
Sbjct: 998 LLSCVRSNSNTGIGFLADSRRLNVAMTRAKYGLIICGNATVLANYMPRVARPPGAPAAPP 1057
Query: 803 ----------------------------------KQPLWNGLLTHYKEHECLVEGPLNNL 828
+ P+W L+ HY +++ +V+GPL+NL
Sbjct: 1058 PGGGTTGLPGNALGPCGVQVGPGASTLSGTPCVPEPPIWRLLIHHYLKYDLVVDGPLSNL 1117
Query: 829 KQSMVQFQKP 838
K S ++ P
Sbjct: 1118 KPSKIRITLP 1127
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 91/142 (64%), Gaps = 7/142 (4%)
Query: 117 GMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNS----R 172
G AG EE +D + EHAC YCG S+P CV++C C K+FCNS
Sbjct: 170 GDAGEPREELKEDHGRGGKATKEIPEHACSYCGASSPDCVLKCCC--CNKYFCNSPCSAS 227
Query: 173 GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLL 232
G++ GSHI+ HLV+++H+EV LH + PLG+ LEC+ CG RNVFLLG I A+ E VVVL+
Sbjct: 228 GSSMGSHIIFHLVKSRHREVMLHPEGPLGDCTLECFQCGSRNVFLLGLIPAEQEGVVVLI 287
Query: 233 CREPCLNMMKESQSKDNVTIRW 254
CREPCL+ QS ++T +W
Sbjct: 288 CREPCLSSGALKQSGWDLT-QW 308
>gi|221505815|gb|EEE31460.1| regulator or nonsense transcripts RENT1, putative [Toxoplasma gondii
VEG]
Length = 1449
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 336/730 (46%), Positives = 445/730 (60%), Gaps = 134/730 (18%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-ELRLVPGDELRLR------------- 286
+K+ Q V +RW+ GLN++R+AYF++ +++ +R+ GDE+++
Sbjct: 400 IKDGQKLVRVKLRWEQGLNRRRLAYFMYSRDEGCNVRVAAGDEVKISTVLPKSVLSGASS 459
Query: 287 ---------------YS------------------GDAAHPAWQSVGHVIKLTAQ-EEVA 312
YS GD W G + + + EEV
Sbjct: 460 SAPASSGGSHGSGCTYSNEATSSNGVGSGGTAGLEGDGNFVQWSCTGSITRFSEDSEEVI 519
Query: 313 LELR------ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLL 366
+E++ + PV + ++++FVWKSTSF+RMQ A++ AVDE SVS Y+YH L+
Sbjct: 520 VEVKKPPNAKGAWDSPVPLL--YTIEFVWKSTSFERMQAALRQLAVDEISVSSYLYHTLM 577
Query: 367 GHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV 426
G ++E Q+++ +P + AP L LN SQ+ A++ LQ P+SLIQGPPGTGKT+T + +V
Sbjct: 578 GKQMEHQIIQTPMPLQISAPNLAPLNPSQMLAIRYALQHPLSLIQGPPGTGKTLTCSTLV 637
Query: 427 YHMAKQGQ-----------------GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR 469
Y M K + GQVLV APSNVAVDQLAE+I+ TGLKV+R+ +KSR
Sbjct: 638 YQMVKLSEVGSHIHPRCAGRVNKEGGQVLVVAPSNVAVDQLAERINRTGLKVIRMYSKSR 697
Query: 470 EAVSSP-----VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRAT 524
E SS VE+L LH +V L T E+ K QLK++ GEL+++DE++ + L
Sbjct: 698 EGASSSLTSFCVENLALHKKVLELKTGSSDEMAKYIQLKEQTGELAAADERRLRLLISRA 757
Query: 525 EREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 584
E EI Q+ADVIC TCVGAGD RL FRFRQV+IDE+ QATEPECLIP+VLGAKQVVL+GD
Sbjct: 758 EMEILQTADVICTTCVGAGDNRLQGFRFRQVVIDEAAQATEPECLIPIVLGAKQVVLIGD 817
Query: 585 HCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
HCQLGPV++ KKAA AGLA SLF RL+ LG +P+RL+VQYRMHP+LS FPS FYEG LQ
Sbjct: 818 HCQLGPVVLSKKAAAAGLATSLFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFYEGELQ 877
Query: 645 NGVTINER----QSSGID-FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIV 699
NGVT+ ER Q G FPWP RPMFFY EEIS SGTSY+NR EA+N+EKIV
Sbjct: 878 NGVTMTERTYFHQGPGDHRFPWPNEERPMFFYHSTASEEISGSGTSYVNRIEASNIEKIV 937
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
T L+ G+ SQIGVITPY+GQRA+I + R L Q + ++EVASVD+FQGREKD+I
Sbjct: 938 TFLLKCGLKASQIGVITPYDGQRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFI 997
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS----------------- 802
+LSCVRSN + GIGFL D RRLNVA+TRA+YG++I GN VL+
Sbjct: 998 LLSCVRSNSNTGIGFLADSRRLNVAMTRAKYGLIICGNATVLANYMPRVARPPGAPAAPP 1057
Query: 803 ----------------------------------KQPLWNGLLTHYKEHECLVEGPLNNL 828
+ P+W L+ HY +++ +V+GPL+NL
Sbjct: 1058 PGSGTTGLPGNALGPCGVQVGPGASTLSGTPCVPEPPIWRLLIHHYLKYDLVVDGPLSNL 1117
Query: 829 KQSMVQFQKP 838
K S ++ P
Sbjct: 1118 KPSKIRITLP 1127
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 91/142 (64%), Gaps = 7/142 (4%)
Query: 117 GMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRCNVPSCRKWFCNS----R 172
G AG EE +D + EHAC YCG S+P CV++C C K+FCNS
Sbjct: 170 GDAGEPREELKEDHGRGGKATKEIPEHACSYCGASSPDCVLKCCC--CNKYFCNSPCSAS 227
Query: 173 GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLL 232
G++ GSHI+ HLV+++H+EV LH + PLG+ LEC+ CG RNVFLLG I A+ E VVVL+
Sbjct: 228 GSSMGSHIIFHLVKSRHREVMLHPEGPLGDCTLECFQCGSRNVFLLGLIPAEQEGVVVLI 287
Query: 233 CREPCLNMMKESQSKDNVTIRW 254
CREPCL+ QS ++T +W
Sbjct: 288 CREPCLSSGALKQSGWDLT-QW 308
>gi|70949042|ref|XP_743968.1| regulator of nonsense transcripts [Plasmodium chabaudi chabaudi]
gi|56523717|emb|CAH78222.1| regulator of nonsense transcripts, putative [Plasmodium chabaudi
chabaudi]
Length = 670
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 312/563 (55%), Positives = 389/563 (69%), Gaps = 49/563 (8%)
Query: 324 DINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEV--------EVQMV 375
+IN GF V+FVWKST++DRMQ A+ FA + S+SG++YH LLGH++ + +
Sbjct: 7 NINTGFVVEFVWKSTAYDRMQLALNEFAFNSFSLSGHLYHKLLGHDIIDEPINYNKKEFS 66
Query: 376 RNTLPRRFG-------------------APGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
N+ +++G AP L LN SQ+ A++ L P+SLIQGPPGT
Sbjct: 67 LNSDSKKYGYNKKSNDNFSTSYKIVNYSAPNLAPLNHSQIDAIQKSLNSPLSLIQGPPGT 126
Query: 417 GKTVTSAAIVYHMAKQGQ-GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSP 475
GKT+T A +VYHM K G+VLV APSNVAVDQL+ +I TGLKVVRLCA+SRE+VSS
Sbjct: 127 GKTLTCATLVYHMHKTKMGGKVLVTAPSNVAVDQLSVRIHRTGLKVVRLCARSRESVSSI 186
Query: 476 VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVI 535
++L LH QV+ L T EL+KL +LK+E GELS DE + K L E +I ADVI
Sbjct: 187 ADYLYLHNQVKLLKTDVGEELNKLLELKEEVGELSQKDENRLKKLILHAEYKILIEADVI 246
Query: 536 CCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
C TCVGA D RL FRF QVL+DE+TQ+TEPECL+PLV AKQ+VLVGDHCQLGP+I+CK
Sbjct: 247 CTTCVGAMDKRLKKFRFNQVLVDEATQSTEPECLVPLV-TAKQIVLVGDHCQLGPIIVCK 305
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
KAA AGL +SLFERLV+LG+ P RL+VQYRMHP LSEFPS FY+G LQNG+T+ ER+
Sbjct: 306 KAASAGLGKSLFERLVMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYP 365
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
+FPWP PMFFY G EE+SASGTSYLNR+EA N+E +V L SG+ +QIGVI
Sbjct: 366 LKNFPWPNSKYPMFFYNSNGLEEMSASGTSYLNRSEAQNMEILVRALLNSGLKATQIGVI 425
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPYEGQRAYI + +N + + L +IEVASVD+FQGREKD+I+LSCVRSN+ GIGFL
Sbjct: 426 TPYEGQRAYITSLFQKNISYQHCL--DIEVASVDAFQGREKDFILLSCVRSNKKLGIGFL 483
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSK------------------QPLWNGLLTHYKEH 817
NDPRRLNVALTRA+YG++I GN KVLS+ +W LL +K+
Sbjct: 484 NDPRRLNVALTRAKYGLIICGNAKVLSRHHFISKEKLNSNETITNVNSVWINLLNQFKKK 543
Query: 818 ECLVEGPLNNLKQSMVQFQKPKK 840
+VEG L+NLK + P K
Sbjct: 544 NLIVEGCLSNLKSITINIPAPIK 566
>gi|260950771|ref|XP_002619682.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
gi|238847254|gb|EEQ36718.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
Length = 967
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/608 (52%), Positives = 410/608 (67%), Gaps = 24/608 (3%)
Query: 237 CLNMMKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPA 295
C MKES+ D++++ W + + A F+ E +EL + GDE+ L + D
Sbjct: 277 CDKFMKESRVLDHLSVTWGTVASGRHTASFIVSTYETSELHVAVGDEVVLHHR-DFGAAE 335
Query: 296 WQSVGHVIKL-TAQEEV-ALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVD 353
W G ++ + A+ ++ +EL+ S VP GFS + VWK T + RMQ A+ FA
Sbjct: 336 WSGAGVLVAVPGARTDIYTVELQPSV-VPPQATTGFSAEIVWKGTPYQRMQHALFRFATS 394
Query: 354 ETSVSGYIYHHLLGHEV-EVQMV-RNTLP-RRFGAPGLPELNASQVFAVKSVLQRPISLI 410
SVS Y+YH +LGH+V EV+ N+L +R A LNASQ AV + P++LI
Sbjct: 395 NESVSAYVYHKILGHDVVEVEFDGENSLNNKRCSA-----LNASQRAAVAHAIASPLTLI 449
Query: 411 QGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSRE 470
QGPPGTGKTVTSAAIV + + + +VLVCAPSNVAVD LA K+ A GLKVVRL A+SRE
Sbjct: 450 QGPPGTGKTVTSAAIVRELVRLRRSRVLVCAPSNVAVDHLALKLRAAGLKVVRLAARSRE 509
Query: 471 AVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQ---GELSSSDEKKYKALKRATERE 527
+ S L LH QVR + +++ L D+Q GEL + + + RA E++
Sbjct: 510 DIESEATPLALHTQVR------AAIPRRVRTLVDKQASGGELDARAKARIARSWRAAEQK 563
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQ 587
+ SADVIC TCVGA D RL + F VL+DESTQATEPE LIP+ GAKQVVLVGDH Q
Sbjct: 564 LISSADVICTTCVGADDRRLEEYEFPIVLVDESTQATEPEALIPITRGAKQVVLVGDHQQ 623
Query: 588 LGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
LGPV++ A+ AGL +SLFERLV +G P+RL+VQYRMHP+LSEF SN FYEG+L NGV
Sbjct: 624 LGPVVLDPAASAAGLRRSLFERLVSMGHVPLRLEVQYRMHPALSEFASNMFYEGSLLNGV 683
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
T ++R G DFPWPVP+RPM F+ G+EEI A+G+SYLNR EA NV+KI+ +R GV
Sbjct: 684 TSDDRTRPGADFPWPVPDRPMMFWANYGKEEIGANGSSYLNRVEAMNVDKIIARLVRDGV 743
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK--EIEVASVDSFQGREKDYIILSCVR 765
P QIGVITPYEGQR YI Y+ N + + E+EV+SVD+FQGREKDYIILSCVR
Sbjct: 744 SPDQIGVITPYEGQRVYIWQYLKLNSTVPKSALNELEVEVSSVDAFQGREKDYIILSCVR 803
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPL 825
+NE + IGFL D RRLNVALTRA++G++ILGNP+ LSK LWN LL HY+E CLVEGPL
Sbjct: 804 ANEDRDIGFLKDSRRLNVALTRAKFGLIILGNPRSLSKNKLWNSLLVHYRERGCLVEGPL 863
Query: 826 NNLKQSMV 833
+NL S+V
Sbjct: 864 DNLNLSLV 871
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 23/146 (15%)
Query: 121 LSFEETGDDVEGFEYGKADFTE------------HACRYCGVSNPACVVRCNVPSCRKWF 168
LS + + + +++G + +E AC YC S+PA + RC +C++WF
Sbjct: 55 LSLTDETEHLTAYQHGNGNESEKDGEHDHEAEPTEACSYCSTSDPASLARCG--TCQRWF 112
Query: 169 CNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESV 228
CN + +GSHIV HLV +KH E+ LH+ S LG LECYNCG RNVF LGF++AK ESV
Sbjct: 113 CNGSSSKAGSHIVAHLVHSKHSEISLHEQSALGGDPLECYNCGSRNVFALGFVAAKQESV 172
Query: 229 VVLLCREPCLNMMKESQSKDNVTIRW 254
VVLLCR PC +Q++D I W
Sbjct: 173 VVLLCRMPC------AQARD---INW 189
>gi|254571547|ref|XP_002492883.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
gi|238032681|emb|CAY70704.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
Length = 941
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 318/594 (53%), Positives = 399/594 (67%), Gaps = 10/594 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-ELRLVPGDELRLRYSGDAAHPAWQSV 299
+ ESQ + +++ W + + +A F D+ L++ GDE+ L Y G WQ
Sbjct: 224 LTESQGLNYISVSWSMSPHNYHLAKFSLSSYDSSNLKIAVGDEIILHYDG-IKEEKWQGS 282
Query: 300 GHVIKL--TAQEEVALELR-ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G+VIKL T E LEL+ +S P + N GF + VWK SF RMQ A+ TFA ++ S
Sbjct: 283 GYVIKLPATYSEGFTLELQPSSVKPPTEHNVGFRAEIVWKGISFQRMQAALTTFA-EKKS 341
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+S +Y LLGH+ E LP P +LN SQV AVKSVLQ+ +SLIQGPPGT
Sbjct: 342 ISKDLYDILLGHKEEQPEFTAKLPEAISVPNFTQLNPSQVNAVKSVLQQRLSLIQGPPGT 401
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH+AK + +VLV A SN+AVD LA K+ GLKVVR+ A+SRE V S +
Sbjct: 402 GKTVTSATIVYHLAKSKKKKVLVTASSNIAVDHLASKLEDIGLKVVRVTARSRENVESAI 461
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+HL+L V + + KL + KDE G LS D Y + + E EI A V+C
Sbjct: 462 DHLSLSSLVSNTNNPVLK---KLLKKKDELGSLSKKDMNIYISQTKKAEAEILAEAHVVC 518
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTC GAGD RLAN +F VLIDESTQ +EPE LIP+V GAKQV+LVGDH QLGPVI+
Sbjct: 519 CTCSGAGDKRLANIKFPYVLIDESTQPSEPESLIPIVKGAKQVILVGDHQQLGPVILHNG 578
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA+AGL QSLFERL+ LG PIRL+VQYRMHPSLSEFPSN FY+G+LQNGV+ +R
Sbjct: 579 AAKAGLRQSLFERLIKLGHIPIRLEVQYRMHPSLSEFPSNMFYDGSLQNGVSHEQRLIRR 638
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP P P+ F+ G EEIS SGTS+LNR+EA N EKI++ L G+ P QIGVIT
Sbjct: 639 SSFPWPAPGIPLLFWSSYGTEEISISGTSFLNRSEAMNCEKIISRLLSEGIKPHQIGVIT 698
Query: 717 PYEGQRAYIVNYMSRNGAL-RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+GQR YIV Y+ NGA +++Y+++EVASVD+FQGREKD+II SC RSN IGFL
Sbjct: 699 PYQGQRDYIVQYLLMNGAHPDREIYQDVEVASVDAFQGREKDFIIFSCTRSNHTNTIGFL 758
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
D RRLNVA+TRA+YG+ +LGN K L K PLWN LL H+++ LVEG L++ +
Sbjct: 759 KDARRLNVAITRAKYGLFVLGNIKTLQKDPLWNRLLVHFRDKGALVEGRLDSFQ 812
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 86/108 (79%), Gaps = 9/108 (8%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC+YCGVSNP CVVRC++ C+KWFCN + T+ SHI++H+V ++H EV LH DS LG
Sbjct: 54 EHACKYCGVSNPRCVVRCDI--CKKWFCNGKSGTT-SHIISHMVLSRHHEVSLHSDSDLG 110
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDN 249
ET LECY+CG ++ F+LGF+SAKT+++VV+LCR PC SQ+KD+
Sbjct: 111 ETELECYSCGNKDPFMLGFVSAKTDTIVVILCRIPC------SQAKDS 152
>gi|328353104|emb|CCA39502.1| Regulator of nonsense transcripts 1 [Komagataella pastoris CBS
7435]
Length = 967
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 318/594 (53%), Positives = 399/594 (67%), Gaps = 10/594 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN-ELRLVPGDELRLRYSGDAAHPAWQSV 299
+ ESQ + +++ W + + +A F D+ L++ GDE+ L Y G WQ
Sbjct: 250 LTESQGLNYISVSWSMSPHNYHLAKFSLSSYDSSNLKIAVGDEIILHYDG-IKEEKWQGS 308
Query: 300 GHVIKL--TAQEEVALELR-ASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
G+VIKL T E LEL+ +S P + N GF + VWK SF RMQ A+ TFA ++ S
Sbjct: 309 GYVIKLPATYSEGFTLELQPSSVKPPTEHNVGFRAEIVWKGISFQRMQAALTTFA-EKKS 367
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+S +Y LLGH+ E LP P +LN SQV AVKSVLQ+ +SLIQGPPGT
Sbjct: 368 ISKDLYDILLGHKEEQPEFTAKLPEAISVPNFTQLNPSQVNAVKSVLQQRLSLIQGPPGT 427
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA IVYH+AK + +VLV A SN+AVD LA K+ GLKVVR+ A+SRE V S +
Sbjct: 428 GKTVTSATIVYHLAKSKKKKVLVTASSNIAVDHLASKLEDIGLKVVRVTARSRENVESAI 487
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
+HL+L V + + KL + KDE G LS D Y + + E EI A V+C
Sbjct: 488 DHLSLSSLVSNTNNPVLK---KLLKKKDELGSLSKKDMNIYISQTKKAEAEILAEAHVVC 544
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTC GAGD RLAN +F VLIDESTQ +EPE LIP+V GAKQV+LVGDH QLGPVI+
Sbjct: 545 CTCSGAGDKRLANIKFPYVLIDESTQPSEPESLIPIVKGAKQVILVGDHQQLGPVILHNG 604
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AA+AGL QSLFERL+ LG PIRL+VQYRMHPSLSEFPSN FY+G+LQNGV+ +R
Sbjct: 605 AAKAGLRQSLFERLIKLGHIPIRLEVQYRMHPSLSEFPSNMFYDGSLQNGVSHEQRLIRR 664
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
FPWP P P+ F+ G EEIS SGTS+LNR+EA N EKI++ L G+ P QIGVIT
Sbjct: 665 SSFPWPAPGIPLLFWSSYGTEEISISGTSFLNRSEAMNCEKIISRLLSEGIKPHQIGVIT 724
Query: 717 PYEGQRAYIVNYMSRNGAL-RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+GQR YIV Y+ NGA +++Y+++EVASVD+FQGREKD+II SC RSN IGFL
Sbjct: 725 PYQGQRDYIVQYLLMNGAHPDREIYQDVEVASVDAFQGREKDFIIFSCTRSNHTNTIGFL 784
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
D RRLNVA+TRA+YG+ +LGN K L K PLWN LL H+++ LVEG L++ +
Sbjct: 785 KDARRLNVAITRAKYGLFVLGNIKTLQKDPLWNRLLVHFRDKGALVEGRLDSFQ 838
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 86/108 (79%), Gaps = 9/108 (8%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
EHAC+YCGVSNP CVVRC++ C+KWFCN + T+ SHI++H+V ++H EV LH DS LG
Sbjct: 54 EHACKYCGVSNPRCVVRCDI--CKKWFCNGKSGTT-SHIISHMVLSRHHEVSLHSDSDLG 110
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDN 249
ET LECY+CG ++ F+LGF+SAKT+++VV+LCR PC SQ+KD+
Sbjct: 111 ETELECYSCGNKDPFMLGFVSAKTDTIVVILCRIPC------SQAKDS 152
>gi|21410895|gb|AAH30916.1| Upf1 protein, partial [Mus musculus]
Length = 543
Score = 590 bits (1522), Expect = e-165, Method: Compositional matrix adjust.
Identities = 308/550 (56%), Positives = 383/550 (69%), Gaps = 52/550 (9%)
Query: 498 KLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI 557
KLQQLKDE GELSS+DEK+Y+ALKR ERE+ +ADVICCTCVGAGDPRLA +FR +LI
Sbjct: 1 KLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILI 60
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP 617
DESTQATEPEC++P+VLGAKQ++LVGDHCQLGPV+MCKKAA+AGL+QSLFERLV+LG++P
Sbjct: 61 DESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRP 120
Query: 618 IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQE 677
IRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R G DF WP P++PMFFYV GQE
Sbjct: 121 IRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQE 180
Query: 678 EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQ 737
EI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPYEGQR+Y+V YM +G+L
Sbjct: 181 EIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHT 240
Query: 738 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 797
+LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDPRRLNVALTRARYG++I+GN
Sbjct: 241 KLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 300
Query: 798 PKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYND--------RRLFF 849
PK LSKQPLWN LL++YKE + LVEGPLNNL++S++QF KP+K+ N +
Sbjct: 301 PKALSKQPLWNHLLSYYKEQKALVEGPLNNLRESLMQFSKPRKLVNTVNPGARFMTTAMY 360
Query: 850 GAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKP----GLHPAGFPMPRVPLPP 905
A I+P + R S+ R P TH P+ +P+P
Sbjct: 361 DAREAIIPGSVYD-------RSSQGR---PSNMYFQTHDQISMISAGPSHVAAMNIPIPF 410
Query: 906 FQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRGSAGAPIGSHLQHQQN 961
PP +PPPG + G AGRG+ G + +
Sbjct: 411 NLVMPP---------------------MPPPGYFGQANGPAAGRGTPKTKTGRGGRQKNR 449
Query: 962 TQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSVGSMSQD 1021
P + + N + ++ SQP G LTQ G+V+ + PSQ + G S +SQD
Sbjct: 450 FGLPGPSQTTLPNSQASQDVASQPFSQGALTQ-GYVS---MSQPSQMSQPGLSQPELSQD 505
Query: 1022 -FLGDDFKSQ 1030
+LGD+FKSQ
Sbjct: 506 SYLGDEFKSQ 515
>gi|68064751|ref|XP_674359.1| regulator of nonsense transcripts [Plasmodium berghei strain ANKA]
gi|56492877|emb|CAI02490.1| regulator of nonsense transcripts, putative [Plasmodium berghei]
Length = 720
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 288/525 (54%), Positives = 366/525 (69%), Gaps = 38/525 (7%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY---SGDAAHPAWQ 297
+KE + NV IRWD+GLNKKR A+FV+ KE++ELR+V GDEL++ Y +GD W
Sbjct: 200 IKEGHKQTNVRIRWDVGLNKKRYAHFVYIKEESELRIVIGDELKISYVYPNGDI----WS 255
Query: 298 SVGHVIKLTAQEEVALELRASQGVP----VDINHGFSVDFVWKSTSFDRMQGAMKTFAVD 353
GH+ +L EE+ALEL+ + +IN GF V+FVWKST++DRMQ A+ FA +
Sbjct: 256 CEGHISRLNTNEEIALELKVLYNIDGPWNYNINTGFVVEFVWKSTAYDRMQLALNEFAFN 315
Query: 354 ETSVSGYIYHHLLGHEV--------EVQMVRNTLPRRFG------------------APG 387
S+SGY+YH LLGH++ + ++ N +R+ AP
Sbjct: 316 SFSLSGYLYHKLLGHDIIDEPIDYNKKELSLNNDNKRYNYNKKTNDNLSTYKIVNYSAPN 375
Query: 388 LPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQG-QVLVCAPSNVA 446
L LN SQ+ A++ L P+SLIQGPPGTGKT+T A +VYHM K G +VLV APSNVA
Sbjct: 376 LAPLNHSQIDAIQKSLNSPLSLIQGPPGTGKTLTCATLVYHMHKTKMGGKVLVTAPSNVA 435
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQ 506
VDQL+ +I TGLKVVRLCA+SRE+VSS ++L LH QV+ L T+ EL+KL +LK+E
Sbjct: 436 VDQLSVRIHRTGLKVVRLCARSRESVSSIADYLYLHNQVKLLKTNIGEELNKLLELKEEV 495
Query: 507 GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEP 566
GELS DE + K L E +I ADVIC TCVGA D RL FRF QVL+DE+TQ+TEP
Sbjct: 496 GELSQKDENRLKKLILHAEYKILIEADVICTTCVGAMDKRLKKFRFNQVLVDEATQSTEP 555
Query: 567 ECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRM 626
ECL+PLV GAKQ+VLVGDHCQLGP+I+CKKAA +GL +SLFERL++LG+ P RL+VQYRM
Sbjct: 556 ECLVPLVTGAKQIVLVGDHCQLGPIIVCKKAASSGLGKSLFERLMMLGITPFRLEVQYRM 615
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP LSEFPS FY+G LQNG+T+ ER+ +FPWP PMFFY G EE+SASGTSY
Sbjct: 616 HPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFFYNSNGLEEMSASGTSY 675
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSR 731
LNR EA N+E +V L SG+ +QIGVITPYEGQRAYI+++ +
Sbjct: 676 LNRNEAQNMEILVRALLNSGLKATQIGVITPYEGQRAYILHFFKK 720
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 51/59 (86%)
Query: 180 IVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCL 238
IV HLVR+KHKE+ LHK+S LGETILECYNCGCRNVFLLGF+ E VV+++CR+PCL
Sbjct: 1 IVTHLVRSKHKEIKLHKNSILGETILECYNCGCRNVFLLGFLPTLEEGVVIIICRDPCL 59
>gi|226481521|emb|CAX73658.1| Regulator of nonsense transcripts 1 [Schistosoma japonicum]
Length = 731
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/362 (69%), Positives = 294/362 (81%), Gaps = 3/362 (0%)
Query: 481 LHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCV 540
LH Q +++ +EL KLQQLKDE GELS D+K+Y+ LKR ERE+ +ADV+CCTCV
Sbjct: 2 LHIQAQNVKG--HTELRKLQQLKDETGELSQDDDKRYRVLKRELERELLMAADVVCCTCV 59
Query: 541 GAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
AGD RL F VLIDESTQATEPECLIPL++G +QVVLVGDHCQLGPVI CKKAA A
Sbjct: 60 TAGDARLERLSFHSVLIDESTQATEPECLIPLMVGCRQVVLVGDHCQLGPVITCKKAASA 119
Query: 601 GLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
GL QSLFER VLLG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT +R DFP
Sbjct: 120 GLTQSLFERFVLLGIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDR-CKKTDFP 178
Query: 661 WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEG 720
WP P+RPMFFY GQEEIS +G SYLNRTEAA VEKIVT L+ GV P+ IGVITPYEG
Sbjct: 179 WPNPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGVHPNTIGVITPYEG 238
Query: 721 QRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
QRAY+ +Y+ +G+L +LY+EIE+ASVD+FQGREKDYIILSCVR+NE+QGIGFLNDPRR
Sbjct: 239 QRAYLAHYLHYSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRR 298
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 840
LNVALTRARYG++++GNPK L KQPLWN LL Y++ LVEGPLNNL + M+QF +PK
Sbjct: 299 LNVALTRARYGLIVVGNPKALCKQPLWNQLLHFYRDQHLLVEGPLNNLSEYMLQFPRPKI 358
Query: 841 IY 842
Y
Sbjct: 359 PY 360
>gi|407400115|gb|EKF28555.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 839
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/552 (50%), Positives = 361/552 (65%), Gaps = 19/552 (3%)
Query: 308 QEEVALELRASQGVPV-----DINHGFSVDF--VWKSTSFDRMQGAMKTFAVDETSVSGY 360
+EEV E+++ V +I +V+F + STS R A+ D TS+S Y
Sbjct: 293 EEEVVFEVKSYDLERVRRALNEILAASTVNFHLEYDSTSDKRKYNALNLMMNDRTSLSAY 352
Query: 361 IYHHLLGHEVEV----QMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
+Y +LG E V LPR + LN+SQ AV++ L+ P++LIQGPPGT
Sbjct: 353 LYFTILGRAEEAAERFSEVNINLPRE----RISNLNSSQDAAVRTALRNPLTLIQGPPGT 408
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKT TS AIV + ++ Q+LVCAPSNVAVDQLAE+ISATGLK VRL A RE V S V
Sbjct: 409 GKTSTSVAIVRELHRRTHSQILVCAPSNVAVDQLAERISATGLKTVRLQAHYREVVPSSV 468
Query: 477 EHLTLHYQVRHLDTSEKSE--LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
+HL L QV S L +L ++ L D K Y R E + ADV
Sbjct: 469 KHLGLDSQVEEFIASSNGNRTLKQLLDMRLAGKALGEQDIKVYNDGVRDIEEMLLGGADV 528
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
ICCTC+GA D RL RF+ VLIDE+TQ TEPE L+PLV GAKQV L+GDHCQL P++
Sbjct: 529 ICCTCIGAADRRLGKMRFQYVLIDEATQGTEPETLVPLVRGAKQVFLLGDHCQLRPIVFS 588
Query: 595 KKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
RAGL +SLFERL+L G + +RL VQYRMHP+LS FPS+ FYEGTLQNG+T +R +
Sbjct: 589 LPVERAGLRRSLFERLLLTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDA 648
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG-VVPSQIG 713
S + FPWP P RP+FFY G EE+SA+G+SYLNR EAA E+I+T ++ G V P IG
Sbjct: 649 SQV-FPWPDPTRPIFFYNTTGSEEVSANGSSYLNRAEAALTERIITKLIQDGKVKPDDIG 707
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
VITPY GQ Y++NY+ R G L + Y+ +EV+SVD+FQGREK++IILSCVRSN QGIG
Sbjct: 708 VITPYGGQCRYLMNYLLRCGPLPKTAYESVEVSSVDAFQGREKEFIILSCVRSNHRQGIG 767
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
F+ D RRLNV++TRA+ G++I+GN ++LS+ P+W+ LL H E +V+GP+ L S V
Sbjct: 768 FVVDWRRLNVSITRAKRGLIIMGNVQLLSRYPVWHALLAHLMELSLVVDGPIEKLVPSKV 827
Query: 834 QFQKPKKIYNDR 845
QKP+ + ++
Sbjct: 828 VLQKPRNVIEEQ 839
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 76/116 (65%), Gaps = 8/116 (6%)
Query: 140 FTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSP 199
E C YCG +P +V C SC+KWFCN TSGSHIV HLV++KH+ V LH ++P
Sbjct: 36 LAEVGCAYCGEDDPHSLVMC--ISCKKWFCNGGHGTSGSHIVLHLVKSKHRAVQLHAENP 93
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
LG++ LECY C N+F LGF+ +K ESVVVL+CREPCL+ SK + WD
Sbjct: 94 LGDSALECYICRSTNIFSLGFMPSKEESVVVLVCREPCLH------SKALRDLNWD 143
>gi|407838371|gb|EKG00049.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi]
Length = 839
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 268/514 (52%), Positives = 346/514 (67%), Gaps = 4/514 (0%)
Query: 335 WKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNAS 394
+ STS R A+ D S+S Y+Y +LG E + + L LN+S
Sbjct: 327 YDSTSDQRKCHALNLMMTDWASLSAYLYFTILGRAEEAAKRFSEVDIDLPRGRLSNLNSS 386
Query: 395 QVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKI 454
Q AV++ L+ P++LIQGPPGTGKT TS AIV + ++ + Q+LVCAPSNVAVDQLAE+I
Sbjct: 387 QDTAVRTALRNPLTLIQGPPGTGKTSTSVAIVLEVNRRIRSQILVCAPSNVAVDQLAERI 446
Query: 455 SATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHL--DTSEKSELHKLQQLKDEQGELSSS 512
SA GLK VRL A RE V S V+HL L QV +S L +L +LK L
Sbjct: 447 SAAGLKTVRLHAHYREVVPSSVKHLGLDSQVEEFIASSSGNRRLRQLLELKLAGEVLDEQ 506
Query: 513 DEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL 572
++K Y R E + ADVICCTC+GA D RL RF+ VLIDE+TQ TEPE L+PL
Sbjct: 507 EQKIYNDSVRDIEEALLGGADVICCTCIGAADRRLGKMRFQYVLIDEATQGTEPETLVPL 566
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
V GAKQV LVGDHCQL P++ A RAGL +SLFERL++ G + +RL VQYRMHP+LS
Sbjct: 567 VRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFERLLMTGHRAVRLDVQYRMHPALSL 626
Query: 633 FPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEA 692
FPS+ FYEGTLQNG+T +R +S + FPWP P RP+FFY G EE+SA+G+SYLNR EA
Sbjct: 627 FPSDQFYEGTLQNGLTEEQRDASRV-FPWPDPTRPIFFYNTTGSEELSANGSSYLNRAEA 685
Query: 693 ANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSF 751
A E+I+T +R G V P IGVITPY GQ Y++NY+ R G L + Y+ +EV+SVD+F
Sbjct: 686 ALTERIITKLIRDGKVKPDDIGVITPYGGQCRYVMNYLVRCGPLPRTAYERVEVSSVDAF 745
Query: 752 QGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
QGREK++IILSCVRSN QGIGF+ D RRLNV++TRA+ G++I+GN ++LS+ P W+ LL
Sbjct: 746 QGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITRAKRGLIIMGNVQLLSRYPAWHALL 805
Query: 812 THYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDR 845
H E +V+GP+ L S V QKP+ + ++
Sbjct: 806 AHLMELSLVVDGPIEKLVPSKVVLQKPRNVSEEQ 839
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 77/116 (66%), Gaps = 8/116 (6%)
Query: 140 FTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSP 199
E C YCG ++P +V C SC+KWFCN TSGSHIV HLV++KH+ V LH ++P
Sbjct: 36 LAEVGCAYCGEADPHSLVMC--ISCKKWFCNGGHGTSGSHIVLHLVKSKHRAVQLHAENP 93
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
LG++ LECY C N+F LGF+ +K ESVVVL+CREPCL+ SK + WD
Sbjct: 94 LGDSALECYICRSTNIFSLGFMPSKEESVVVLVCREPCLH------SKALRDLNWD 143
>gi|71417104|ref|XP_810474.1| regulator of nonsense transcripts 1 [Trypanosoma cruzi strain CL
Brener]
gi|70875009|gb|EAN88623.1| regulator of nonsense transcripts 1, putative [Trypanosoma cruzi]
Length = 839
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/514 (52%), Positives = 346/514 (67%), Gaps = 4/514 (0%)
Query: 335 WKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNAS 394
+ STS R A+ D +S+S Y+Y +LG E + + L LN+S
Sbjct: 327 YDSTSDQRKCHALNLMMTDWSSLSAYLYFTILGRAEEAAKRFSEVDINLPRGRLSNLNSS 386
Query: 395 QVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKI 454
Q AV++ L+ P++LIQGPPGTGKT TS AIV + + + Q+LVCAPSNVAVDQLAE+I
Sbjct: 387 QDTAVRTALRNPLTLIQGPPGTGKTSTSVAIVLEVNLRIRSQILVCAPSNVAVDQLAERI 446
Query: 455 SATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHL--DTSEKSELHKLQQLKDEQGELSSS 512
SA GLK VRL A RE V S V+HL L QV +S L +L +LK L
Sbjct: 447 SAAGLKTVRLHAHYRELVPSSVKHLGLDSQVEEFIASSSGNRRLRQLLELKLAGEVLDEQ 506
Query: 513 DEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL 572
++K Y R E + ADVICCTC+GA D RL RF+ VLIDE+TQ TEPE L+PL
Sbjct: 507 EQKIYNDSVRDIEEALLGGADVICCTCIGAADRRLGKMRFQYVLIDEATQGTEPETLVPL 566
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
V GAKQV LVGDHCQL P++ A RAGL +SLFERL++ G + +RL VQYRMHP+LS
Sbjct: 567 VRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFERLLMTGHRAVRLDVQYRMHPALSL 626
Query: 633 FPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEA 692
FPS+ FYEGTLQNG+T +R +S + FPWP P RP+FFY G EE+SA+G+SYLNR EA
Sbjct: 627 FPSDQFYEGTLQNGLTEEQRDASRV-FPWPDPTRPIFFYNTTGSEELSANGSSYLNRAEA 685
Query: 693 ANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSF 751
A E+I+T +R G V P IGVITPY GQ Y++NY+ R G L + Y+ +EV+SVD+F
Sbjct: 686 ALTERIITKLIRDGKVKPDDIGVITPYGGQCRYVMNYLVRCGPLPRTAYERVEVSSVDAF 745
Query: 752 QGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
QGREK++IILSCVRSN QGIGF+ D RRLNV++TRA+ G++I+GN ++LS+ P W+ LL
Sbjct: 746 QGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITRAKRGLIIMGNVQLLSRYPAWHALL 805
Query: 812 THYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDR 845
H E +V+GP+ L S V QKP+ + ++
Sbjct: 806 AHLMELSLVVDGPIEKLVPSKVVLQKPRNVSEEQ 839
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 77/116 (66%), Gaps = 8/116 (6%)
Query: 140 FTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSP 199
E C YCG ++P +V C SC+KWFCN TSGSHIV HLV++KH+ V LH ++P
Sbjct: 36 LAEVGCAYCGEADPHSLVMC--ISCKKWFCNGGHGTSGSHIVLHLVKSKHRAVQLHAENP 93
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
LG++ LECY C N+F LGF+ +K ESVVVL+CREPCL+ SK + WD
Sbjct: 94 LGDSALECYICRSTNIFSLGFMPSKEESVVVLVCREPCLH------SKALRDLNWD 143
>gi|261328192|emb|CBH11169.1| nonsense mRNA reducing factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 842
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/502 (51%), Positives = 340/502 (67%), Gaps = 5/502 (0%)
Query: 342 RMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKS 401
R A++ FA E SVS Y+Y +LG + + G LN SQ A++
Sbjct: 323 RKMEALQQFARSEGSVSAYLYFTILGQKERAAHRNSGFDTEPEPRGHHNLNYSQEQALRV 382
Query: 402 VLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKV 461
L+ P++LIQGPPGTGKT TS AI+ + + ++LVCAPSNVAVD LA+++S TGLKV
Sbjct: 383 ALRNPLTLIQGPPGTGKTSTSVAIIRELHSHVKSRILVCAPSNVAVDHLAQRVSGTGLKV 442
Query: 462 VRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALK 521
VRL AK R + VE + L QVR + S L +L++L D S ++K Y K
Sbjct: 443 VRLQAKYRNDIPCSVESIGLERQVRDY-INASSGLERLKELLDSMQTGKSLNDKDYGTYK 501
Query: 522 ---RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
ER I ++ADV+CCTC+GAGD RL +F+ VLIDE+TQ TEPE LIPLV GAKQ
Sbjct: 502 DGVEKIERLILRNADVVCCTCIGAGDYRLKTMKFKHVLIDEATQGTEPEVLIPLVRGAKQ 561
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSF 638
V+LVGDHCQL P++ A +AG +SLFERLVL+G +P+RL VQYRM+PSLS FPS+ +
Sbjct: 562 VILVGDHCQLRPLVFSTAAEKAGYQRSLFERLVLMGHRPVRLDVQYRMNPSLSFFPSHHY 621
Query: 639 YEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKI 698
YEGTLQNGVT +R +S + FPWP +P+FFY G EE+ ++G SYLNR EAA E+I
Sbjct: 622 YEGTLQNGVTAEQRDASEV-FPWPDVTKPIFFYNATGNEELGSNGRSYLNRAEAALTEQI 680
Query: 699 VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
VT ++ GV P IGVITPY Q Y+ +Y+SR+G L ++Y +E++SVD+FQGREK++
Sbjct: 681 VTKLIQGGVEPGDIGVITPYRSQCRYLRSYLSRSGRLPMEVYDRVEISSVDAFQGREKEF 740
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IILSCVRSN QG GF+ D RRLNV+LTRA+ G++I+GN ++ S+ P W+ LL H
Sbjct: 741 IILSCVRSNHRQGAGFVTDGRRLNVSLTRAKRGLIIMGNVQLFSRYPGWHELLVHMNSLS 800
Query: 819 CLVEGPLNNLKQSMVQFQKPKK 840
+VEGP+++L S V QKP+K
Sbjct: 801 LIVEGPIDDLVPSAVVLQKPRK 822
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 71/112 (63%), Gaps = 8/112 (7%)
Query: 144 ACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGET 203
+C YC +P C+ CN C KWFCN TSGSHI+ HLV++ H + LH ++ LG++
Sbjct: 29 SCSYCSEESPTCLAFCN--GCSKWFCNGSNGTSGSHIILHLVKSGHNSLKLHAENSLGDS 86
Query: 204 ILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
LECY C N+F LGF+ +K E+VVVL+CREPCL+ SK + WD
Sbjct: 87 TLECYICRSSNIFSLGFMPSKEEAVVVLVCREPCLH------SKTLRDLNWD 132
>gi|340053654|emb|CCC47947.1| putative nonsense mRNA reducing factor 1 [Trypanosoma vivax Y486]
Length = 861
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/549 (49%), Positives = 350/549 (63%), Gaps = 12/549 (2%)
Query: 299 VGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
V HV ++ E+ AS V F+++F S R A+ TF+ TS+S
Sbjct: 311 VAHVTSSAQDKKTLDEILASSSV------NFALEF--NDVSDKRKVEALSTFSRRSTSLS 362
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
Y+Y +LGH + + + A L LN SQ AV++ L++P++LIQGPPGTGK
Sbjct: 363 AYLYFTILGHVDKAEERYSETDIELPAKRLSNLNNSQEQAVRTALKKPLTLIQGPPGTGK 422
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
T TS AIV + ++ + Q+LVCAPSNVAVD LAE++ A GL VVRL + R+ +S VE
Sbjct: 423 TSTSVAIVSQLYERVKTQILVCAPSNVAVDHLAERLEAAGLNVVRLQPRCRDVISVAVER 482
Query: 479 LTLHYQVRH-LDTSEKSE-LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L L QV ++TS E L ++ L +S D YK E I ADV+C
Sbjct: 483 LGLDNQVEDFIETSTGHETLKRILGLIRSGENISDEDYNAYKKGTMKIEELILNKADVVC 542
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTC+GAGD RL RF+ VLIDE+TQ TEPE LIPLV GAKQV LVGDHCQL PV+
Sbjct: 543 CTCIGAGDSRLREMRFKYVLIDEATQGTEPETLIPLVRGAKQVFLVGDHCQLRPVVFSIA 602
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A R G +SLFERL+++G +P+RL VQYRMHP LS F S+ FYEGTLQNGVT +R +
Sbjct: 603 AERTGFRRSLFERLLMMGHRPLRLDVQYRMHPCLSLFISHHFYEGTLQNGVTEGQRDALQ 662
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS-GVVPSQIGVI 715
+ FPWP RP FFY G EE+ A+G+SYLNRTEAA E++VT +R GV P IGVI
Sbjct: 663 V-FPWPDGTRPFFFYNSTGPEELGANGSSYLNRTEAALAEQVVTKLIRDGGVSPDGIGVI 721
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPY Q ++ NY+SR G L Y +EV+SVD+FQGREK++II SCVRSN QGIGF
Sbjct: 722 TPYRSQCRFLRNYLSRCGFLPASTYDRVEVSSVDAFQGREKEFIIFSCVRSNHRQGIGFA 781
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
D RRLNV+LTRA+ G++I+GN ++ S+ P WN LL H K +VEGP++ L S V
Sbjct: 782 VDGRRLNVSLTRAKRGLIIMGNVQLFSRYPNWNELLVHMKSLSLIVEGPIDALVPSNVVL 841
Query: 836 QKPKKIYND 844
KP++ N+
Sbjct: 842 HKPRQRTNN 850
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 74/112 (66%), Gaps = 8/112 (7%)
Query: 144 ACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGET 203
+C YC NP+C+ C+ +C KWFCN TSGSHIV HLV+++H + LH ++ LG++
Sbjct: 52 SCSYCDEENPSCLATCS--TCSKWFCNGSHGTSGSHIVLHLVKSRHMSIKLHPENALGDS 109
Query: 204 ILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
LECY C N+F LGF+ +K ESVVVL+CREPCL+ SK + WD
Sbjct: 110 TLECYVCRSTNIFSLGFMPSKEESVVVLVCREPCLH------SKTLRDLNWD 155
>gi|72389186|ref|XP_844888.1| regulator of nonsense transcripts 1 [Trypanosoma brucei TREU927]
gi|62359996|gb|AAX80419.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei]
gi|70801422|gb|AAZ11329.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 842
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/503 (51%), Positives = 342/503 (67%), Gaps = 7/503 (1%)
Query: 342 RMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKS 401
R A++ FA E SVS Y+Y +LG + + G LN SQ A++
Sbjct: 323 RKMEALQQFARSEGSVSAYLYFTILGQKERAAHRNSGFDTEPEPRGHHNLNYSQEQALRV 382
Query: 402 VLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKV 461
L+ P++LIQGPPGTGKT TS AI+ + + ++LVCAPSNVAVD LA+++S TGLKV
Sbjct: 383 ALRNPLTLIQGPPGTGKTSTSVAIIRELHSHVKSRILVCAPSNVAVDHLAQRVSGTGLKV 442
Query: 462 VRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKAL 520
VRL AK R + VE + L QV +++ S S L +L++L D S ++K Y
Sbjct: 443 VRLQAKYRNDIPCSVESIGLERQVGDYINAS--SGLERLKELLDSMQTGKSLNDKDYGTY 500
Query: 521 K---RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAK 577
K ER I ++ADV+CCTC+GAGD RL +F+ VLIDE+TQ TEPE LIPLV GAK
Sbjct: 501 KDGVEKIERLILRNADVVCCTCIGAGDYRLKTMKFKHVLIDEATQGTEPEVLIPLVRGAK 560
Query: 578 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNS 637
QV+LVGDHCQL P++ A +AG +SLFERLVL+G +P+RL VQYRM+PSLS FPS+
Sbjct: 561 QVILVGDHCQLRPLVFSTAAEKAGYQRSLFERLVLMGHRPVRLDVQYRMNPSLSFFPSHH 620
Query: 638 FYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEK 697
+YEGTLQNGVT +R +S + FPWP +P+FFY G EE+ ++G SYLNR EAA E+
Sbjct: 621 YYEGTLQNGVTAEQRDASEV-FPWPDVTKPIFFYNATGNEELGSNGRSYLNRAEAALTEQ 679
Query: 698 IVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKD 757
IVT ++ GV P IGVITPY Q Y+ +Y+SR+G L ++Y +E++SVD+FQGREK+
Sbjct: 680 IVTKLIQGGVEPGDIGVITPYRSQCRYLRSYLSRSGRLPMEVYDRVEISSVDAFQGREKE 739
Query: 758 YIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+IILSCVRSN QG GF+ D RRLNV+LTRA+ G++I+GN ++ S+ P W+ LL H
Sbjct: 740 FIILSCVRSNHRQGAGFVTDGRRLNVSLTRAKRGLIIMGNVQLFSRYPGWHELLVHMNSL 799
Query: 818 ECLVEGPLNNLKQSMVQFQKPKK 840
+VEGP+++L S V QKP+K
Sbjct: 800 SLIVEGPIDDLVPSAVVLQKPRK 822
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 71/112 (63%), Gaps = 8/112 (7%)
Query: 144 ACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGET 203
+C YC +P C+ CN C KWFCN TSGSHI+ HLV++ H + LH ++ LG++
Sbjct: 29 SCSYCSEESPTCLAFCN--GCSKWFCNGSNGTSGSHIILHLVKSGHNSLKLHAENSLGDS 86
Query: 204 ILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
LECY C N+F LGF+ +K E+VVVL+CREPCL+ SK + WD
Sbjct: 87 TLECYICRSSNIFSLGFMPSKEEAVVVLVCREPCLH------SKTLRDLNWD 132
>gi|300176550|emb|CBK24215.2| unnamed protein product [Blastocystis hominis]
Length = 939
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/601 (44%), Positives = 371/601 (61%), Gaps = 8/601 (1%)
Query: 249 NVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQS--VGHVIKLT 306
+V+I WD G+ + +A FV + D+ R+ G E+ + Y + G VI +
Sbjct: 277 DVSITWDTGIGQSTIATFVHDQLDSRYRMNVGQEIVIHYETKVGDTVCEGNYAGKVIHID 336
Query: 307 AQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLL 366
+ + +++ + P GFSV F W +T F RM A+ ++ E ++ +IY +L
Sbjct: 337 -NNRIKVLMKSQEEPPTGRQTGFSVTFCWNATPFTRMLKAVSSYFNPE-RMTDFIYQSIL 394
Query: 367 GHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV 426
G+ V + + + P +LN Q+ AVK+ L + ++LIQGPPGTGKTV SA I+
Sbjct: 395 GYNVPDKEYPPVYIKSYSLPNFKQLNGFQLDAVKNALNKHLTLIQGPPGTGKTVVSATII 454
Query: 427 YHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR 486
YH+ K + +VLVCAPSN+AVD L ++ GL VVRL A+SRE+V S VE++ LH
Sbjct: 455 YHIVKSYKQRVLVCAPSNIAVDNLTLRLHRLGLCVVRLVARSRESVRSEVENVCLHNLAV 514
Query: 487 HLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPR 546
++ SEL+KL E G+LS + YK+ E I A+V+CCTC A D R
Sbjct: 515 YVG-GPTSELYKLNAKLQENGQLSEKEAALYKSYLTIAEHTILSHAEVVCCTCSAALDAR 573
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
LA F VL+DESTQA EPECLIP+V G +++LVGDH QLGPVI ++A RA SL
Sbjct: 574 LAGLSFPAVLVDESTQAREPECLIPIVNGCDRLILVGDHKQLGPVIQDQEAKRAEFDISL 633
Query: 607 FERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR 666
FERL+ LG+KP L +QYRMHP+LS FPSN FY G L+N V +ER + + FPWP +
Sbjct: 634 FERLLSLGIKPYCLNIQYRMHPALSIFPSNMFYNGALKNAVHSSER-TRNLAFPWPRSDM 692
Query: 667 PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV 726
PM F+ G E+ +SG S+LNR EA VEK+V F+ G+ +IGVITPY+ QR +
Sbjct: 693 PMMFWCVQGSEDPGSSGRSFLNRMEATCVEKVVERFINCGIPGDRIGVITPYDSQRTLLR 752
Query: 727 NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 786
+SR+ +++ K++E+ASVD FQGRE DYII SCVRSN +GFLND RRLNVA+T
Sbjct: 753 QVLSRHMEKAEEV-KKVEIASVDEFQGRENDYIIFSCVRSNSDGVLGFLNDMRRLNVAIT 811
Query: 787 RARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGP-LNNLKQSMVQFQKPKKIYNDR 845
RA+YGIVI+GNP L P+W L+ H++ ++CLV G L++L + + K ++R
Sbjct: 812 RAKYGIVIIGNPNTLRSHPIWVELMNHFQMNKCLVCGASLDHLSLYSLDLRGRTKYVDNR 871
Query: 846 R 846
+
Sbjct: 872 Q 872
Score = 63.2 bits (152), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 144 ACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPL--- 200
AC YC + V +C V C++WFCNS+ S SHI+ HL+ H+ + LH D +
Sbjct: 68 ACCYCRNDDVTAVAQCAV--CKRWFCNSQCK-SRSHIIQHLIYNDHRSIILHPDGLIPMT 124
Query: 201 GETILECYNCGCR-NVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
+T L C N NVF LG I + + +CR+ CL+ + + I WD
Sbjct: 125 KDTPLSCLNNAQHTNVFSLGIIQSVNGDYTI-ICRDNCLDRSRLKE------IGWD 173
>gi|123508693|ref|XP_001329696.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121912743|gb|EAY17561.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 882
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 278/654 (42%), Positives = 382/654 (58%), Gaps = 38/654 (5%)
Query: 238 LNMMKESQSKDNVTIRWDIGLNKKRVAY------FVFPKEDNELRLVPGDELRLRYSGDA 291
L M + Q +++ R ++ +N KR Y F FP + + GD ++
Sbjct: 239 LEMDYDKQVTESMIYR-NVKINFKREGYNRFTGTFSFPISETSRPINIGDTFLVKCG--- 294
Query: 292 AHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAM-KTF 350
A+++ G + + E+ L L Q P + + F+V VW TSF RM GA+ K
Sbjct: 295 ---AYEAKGSLERTLGVGEIEL-LFIRQPTPPE-DAIFTVQLVWLDTSFVRMIGAIAKMP 349
Query: 351 AVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAP-------GLPELNASQVFAVKSVL 403
+TS + I ++GH + +T+P G P G+P LN SQV AV L
Sbjct: 350 QSPQTSTANIIKEVIMGH------LPDTIPTLPGEPNRSPVVKGIPTLNLSQVNAVSYAL 403
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 463
+ P +IQGPPGTGKT T AA+V + G VLVCAPSN AV+++ E I++T V R
Sbjct: 404 KSPFCMIQGPPGTGKTTTIAALVTRFLQAKAGPVLVCAPSNAAVERVTEAIASTHASVCR 463
Query: 464 LCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRA 523
+ + SR + + + LH V LD +E L+ + ++ + S +EKK+K L+++
Sbjct: 464 VISTSRTDIEAIDDKYALHNMVYSLDCAESRRLNDML-IERSNRDFSEDEEKKFKDLRKS 522
Query: 524 TEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVG 583
E + +ADVI CTC+ + DPRLA F V+IDE+TQA EPE LIP++ G+KQV LVG
Sbjct: 523 LENRVIDAADVITCTCITSADPRLATKVFPTVIIDEATQAVEPEILIPIMHGSKQVCLVG 582
Query: 584 DHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTL 643
DH QLGPV+ K AGL S+ +RLV LGL+P RL QYRMHP LSEFPSN+FY+G L
Sbjct: 583 DHMQLGPVVTNPKCVEAGLGNSIVQRLVQLGLRPQRLLTQYRMHPVLSEFPSNTFYDGEL 642
Query: 644 QNGVTINERQSSGIDFPWPVPNRPMFFYVQM-GQEEISASGTSYLNRTEAANVEKIVTTF 702
NG+ +R F WP P+ P+ FY + +EEIS SGTSY+N EA V +IVT
Sbjct: 643 MNGIPAEKRTPQQPVFNWPKPSFPLMFYNNVNNEEEISNSGTSYINAFEATIVSQIVTQL 702
Query: 703 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 762
++GV P QIG+I+PY GQ+ Y+ N+++ L Y+ + +ASVDSFQG EKDYII+S
Sbjct: 703 CKAGVDPQQIGIISPYSGQKFYLQNFLASMATLPSSFYQRLAIASVDSFQGGEKDYIIMS 762
Query: 763 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVE 822
CVR N H IGFL D RRLNVALTRA+YG++I+G +VLSK LW LL H +E LVE
Sbjct: 763 CVRCNPHGSIGFLKDYRRLNVALTRAKYGLIIVGCARVLSKSILWYNLLRHCQEQHVLVE 822
Query: 823 GPLNNLKQSMVQFQKPKKIYNDRRLFFGA-----GPGIVPNDISTSNPNADRRG 871
G + +LK+S QKP +F G G +VPN + ++ N D G
Sbjct: 823 GSIMDLKESPCVLQKPS--VKQSEIFPGIPVGEFGKDMVPNTVESNFDNDDNDG 874
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEE--TGDDVEGFEYGKADFTEHACRYCGVSNPACVV 157
K+ AN+ + ++ V+G G + +E T DD E E D C YC P C+V
Sbjct: 4 KKQANDRAWSANDNAVKGSVGYTPKEDPTIDD-EPQEELVID--RPCCSYCLCDIPECLV 60
Query: 158 RCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFL 217
+ + +WFCN RG SHI++HLV+++H E+ L +P + + CY C N+F
Sbjct: 61 KDK--AIGRWFCNGRGKALHSHIIHHLVKSRHMEIELPPQNPYSQIPMTCYLCHSTNIFR 118
Query: 218 LGFISAKTESVVVLLCREPC 237
L F+ ++ +LCRE C
Sbjct: 119 LSFVQSQKTGKYFVLCRECC 138
>gi|409082016|gb|EKM82374.1| hypothetical protein AGABI1DRAFT_111018 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 463
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/272 (81%), Positives = 245/272 (90%)
Query: 569 LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHP 628
+IPLVLG KQVVLVGDH QLGPVIM KKAARAGL QSLFERLV+LG +PIRLQVQYRMHP
Sbjct: 1 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 60
Query: 629 SLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 688
LSEFPSN FYEGTLQNGVT ER +DFPWPVP+ PMFFY +GQEEIS+SGTS+LN
Sbjct: 61 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 120
Query: 689 RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 748
RTEA+NVEKIVT F +SGVVP+QIG++TPYEGQR+YIVNYM NG+L++ LYKEIEVASV
Sbjct: 121 RTEASNVEKIVTKFFKSGVVPNQIGIVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASV 180
Query: 749 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
D+FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA+YG+VILGNPKVLSK PLW+
Sbjct: 181 DAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWH 240
Query: 809 GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 840
LLTHYKE CLVEGPLNNL+ SM+QF KP+K
Sbjct: 241 YLLTHYKEKNCLVEGPLNNLQPSMIQFSKPRK 272
>gi|426199843|gb|EKV49767.1| hypothetical protein AGABI2DRAFT_190222 [Agaricus bisporus var.
bisporus H97]
Length = 463
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/272 (81%), Positives = 245/272 (90%)
Query: 569 LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHP 628
+IPLVLG KQVVLVGDH QLGPVIM KKAARAGL QSLFERLV+LG +PIRLQVQYRMHP
Sbjct: 1 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 60
Query: 629 SLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 688
LSEFPSN FYEGTLQNGVT ER +DFPWPVP+ PMFFY +GQEEIS+SGTS+LN
Sbjct: 61 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 120
Query: 689 RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 748
RTEA+NVEKIVT F +SGVVP+QIG++TPYEGQR+YIVNYM NG+L++ LYKEIEVASV
Sbjct: 121 RTEASNVEKIVTKFFKSGVVPNQIGIVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASV 180
Query: 749 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
D+FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA+YG+VILGNPKVLSK PLW+
Sbjct: 181 DAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWH 240
Query: 809 GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 840
LLTHYKE CLVEGPLNNL+ SM+QF KP+K
Sbjct: 241 YLLTHYKEKNCLVEGPLNNLQPSMIQFSKPRK 272
>gi|401827897|ref|XP_003888241.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999441|gb|AFM99260.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 771
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 300/814 (36%), Positives = 425/814 (52%), Gaps = 164/814 (20%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C+YC + ++ C +C K+FCNSR +S SHIV HLV+A+HK + + D
Sbjct: 3 CQYCEATEF--LIEC--ITCGKYFCNSRSASSISHIVFHLVKARHKSIRIEGD------- 51
Query: 205 LECYNCGCRNVFLL----GFISAKTESVVVLLCREPCLNMMK------------------ 242
++C CG N+F L G I S L E CL ++K
Sbjct: 52 VKCRKCGEDNLFKLLDNNGKIFCNGCSTGRTLVEERCLTIIKSPEVRGRRLTKQQMAEME 111
Query: 243 ---------------------------ESQSKDNVTIR-----WDIGLNKKRVAY--FVF 268
E++ + I+ ++ + +R+ Y F F
Sbjct: 112 EKGVSSLPQVKPRFEAKEYVEVFSSLIEAECRKEREIKESMRQENVFVRWERMRYCYFYF 171
Query: 269 PKEDNELRLVPGDELRLRY-SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINH 327
D+EL++ GDE+RL + SG H G V T EE+ +E+ P
Sbjct: 172 QNGDSELKINVGDEIRLTHKSGFVLH------GFVSGETFSEELKVEVETPGDYP---RS 222
Query: 328 GFSVDFVWKSTSFDRMQGAMKTF------------------------------------A 351
G++V+++W+ ++RM+ A++
Sbjct: 223 GYTVEYLWRGVCYERMEWALRKLYSTYRKEISKSKRSRCSNDEEADASKCLGKRNPMGCT 282
Query: 352 VDETSVSGY------------IYHHLL-GHEVEVQMVRNTLPRRFGAPGLPELNASQVFA 398
D + G I+ ++L GH+ + V + F +P LP LNASQ A
Sbjct: 283 EDRGEIDGKRAAKKSANEGPSIFEYILKGHKESIGNVEHI----FMSPNLPRLNASQETA 338
Query: 399 VKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATG 458
V++ L R ++LIQGPPGTGKT+ S+AIVY+ K G+VLV APSN AVDQL KI TG
Sbjct: 339 VRAALGRKVTLIQGPPGTGKTLVSSAIVYNFVKHYGGKVLVVAPSNTAVDQLTLKIHKTG 398
Query: 459 LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK 518
LKV+R+ ++ RE S V L+LH ++ L K KDE + D +Y
Sbjct: 399 LKVLRVMSRRRECGQSDVSFLSLHENLKELQEGRKK--------KDE----ACRDNGRYS 446
Query: 519 AL-----KRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLV 573
++ + +++ A+VI CTCV +G FRF VLIDE+ Q+TEP LIPLV
Sbjct: 447 SIYNDEASESLRKQLLNQAEVITCTCVTSGQKMFNKFRFHYVLIDEAVQSTEPLSLIPLV 506
Query: 574 LGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEF 633
G K++VLVGDH QLGP I+CKK A+AG QSLFERL+ +G+ P L VQYRM L E+
Sbjct: 507 YGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERLISIGVVPYVLSVQYRMDTDLCEW 566
Query: 634 PSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAA 693
PS FY G L G F +P FFYV G+EE+SASGTS++N+ EA
Sbjct: 567 PSEMFYNGELLTG------GKGFCRFDLGIPTN--FFYVCYGREEVSASGTSFINQAEAL 618
Query: 694 NVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQG 753
E I+ + GV SQIGVITPYEGQR+YI+N + GA L E+++VD FQG
Sbjct: 619 YCESIIRHLFKCGVTESQIGVITPYEGQRSYILNRIF--GAEPGNL----EISNVDGFQG 672
Query: 754 REKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
REKD+II+S VRSN +QGIGF+ D RR+NV LTRA++G+VI+GNP L K +W+ LL+
Sbjct: 673 REKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHGLVIIGNPTTLMKHDIWSNLLSF 732
Query: 814 YKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 847
Y ++EGPL+NL++ ++ KP K+++ + +
Sbjct: 733 YDRKGLVMEGPLHNLRRVII---KPPKLFDFKEM 763
>gi|300708470|ref|XP_002996413.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
gi|239605714|gb|EEQ82742.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
Length = 683
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 275/743 (37%), Positives = 394/743 (53%), Gaps = 133/743 (17%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C+YC + +V C+ +C FCNSR +S SHI+ HLV+ KHK + + +
Sbjct: 3 CKYCDLEYS--LVECS--TCNIKFCNSRSLSSISHIIFHLVKTKHKSIKIDNKDVI---- 54
Query: 205 LECYNCGCRNVFLL-----GFISAKTESVVVLLCREPCLNMMK----------------- 242
C C N+F L K L+ E CL ++
Sbjct: 55 --CIKCKEDNIFKLRKYNENIFCKKCSDYGDLIVDERCLTLVDSPCIDKGKKLTKQQMTE 112
Query: 243 -ESQSKD---------------------------------------NVTIRWDIGLNKKR 262
E QS D NV +RW+ +
Sbjct: 113 IEEQSSDYLPVIKSRFEPEEYVNIFSALIDAECQKEKEIKESMKQSNVVVRWE----NMK 168
Query: 263 VAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVP 322
YF F + D +L++ GDE++L + G + + EE+ E+ P
Sbjct: 169 FGYFYFQRSDADLKINIGDEIKLTHKSGLI-----ITGFISNDSFTEELKFEVDHYGDYP 223
Query: 323 VDINHGFSVDFVWKSTSFDRMQGAMKTF---AVDETSVSGYIYHHLL--GHEVEVQMVRN 377
G++++++W+ ++RM+ A+ + + + +Y +L+ G E V N
Sbjct: 224 ---RSGYTIEYIWRGVCYERMKWALNKLYNMYLRKNTNEMTLYEYLIRGGKE----YVNN 276
Query: 378 TLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQV 437
+ P +P+LN Q +VK+ L R ++LIQGPPGTGKT+ SAAIVY+ K+ +G+V
Sbjct: 277 NIELE-TVPNMPKLNKFQEISVKAALSRKVTLIQGPPGTGKTLVSAAIVYNYIKKFKGKV 335
Query: 438 LVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELH 497
LV APSN AVDQL K+ TGLKV+R+ ++ RE S V L+LH
Sbjct: 336 LVVAPSNTAVDQLTLKVHKTGLKVIRVMSRRREYTQSDVNFLSLH--------------- 380
Query: 498 KLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI 557
+ +KD Q + SDE+ + +K+ R ++Q ADVI CTCV AG +F VL+
Sbjct: 381 --ENVKDLQTMCNMSDEEDEENIKK---RLLNQ-ADVITCTCVTAGQKMFNKMKFSCVLV 434
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP 617
DE+ Q+TEP +IPLV G +++LVGDH QLGP I+CKK A+AG QSLFERL+LLG+ P
Sbjct: 435 DEAVQSTEPLNIIPLVYGCTKLILVGDHKQLGPTILCKKVAKAGFKQSLFERLILLGISP 494
Query: 618 IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQE 677
L +QYRMH L E+PS +FY G LQ G + + + GI P+ FFY G+E
Sbjct: 495 YILSLQYRMHADLCEWPSETFYNGELQTGNRLFYKLNIGI------PHN--FFYACYGKE 546
Query: 678 EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVN--YMSRNGAL 735
E+S SGTS++N EA E I+ +SG+ QIGVITPYEGQR++I+N + S G L
Sbjct: 547 EVSTSGTSFVNPMEALYCESIIRHLFKSGITEKQIGVITPYEGQRSHILNRIFGSEPGNL 606
Query: 736 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
E+++VD FQGREKDYII+S VRSN +QGIGF+ D RR+NVALTRA++G++I+
Sbjct: 607 --------EISNVDGFQGREKDYIIVSLVRSNLYQGIGFVGDKRRMNVALTRAKHGLIII 658
Query: 796 GNPKVLSKQPLWNGLLTHYKEHE 818
GNP + K W LL Y++ +
Sbjct: 659 GNPNTMIKHDAWKSLLEFYEKKD 681
>gi|303391232|ref|XP_003073846.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302994|gb|ADM12486.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 779
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 299/818 (36%), Positives = 422/818 (51%), Gaps = 164/818 (20%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C+YC V ++ C C K FCNSR +S SHIV HLV+AKHK + + D
Sbjct: 3 CQYCEVEE--LLIEC--VGCGKHFCNSRSASSISHIVFHLVKAKHKSIRIGGD------- 51
Query: 205 LECYNCGCRNVFLL----GFISAKTESVVVLLCREPCLNMMK------------------ 242
++C CG N+F L G I S ++ E CL ++K
Sbjct: 52 IKCRKCGEDNLFKLLENNGKIFCNGCSSGRMVVEERCLTIIKSPEVQGKRLTKQQMAEME 111
Query: 243 ---------------------------ESQSKDNVTIRWD-------IGLNKKRVAYFVF 268
E++ K I+ + K + YF F
Sbjct: 112 EKSMASLPYVKSRFEAKEYVEVFSSLIEAECKKEREIKESMRQENVFVRWEKLKYCYFYF 171
Query: 269 PKEDNELRLVPGDELRLRY-SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINH 327
D+EL++ GDE+RL + SG H G V T EE+ +E+ P
Sbjct: 172 QNGDSELKINIGDEIRLTHKSGFVLH------GFVSGETFSEELKVEIETPGDYP---RS 222
Query: 328 GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHH----------------------- 364
G++V+++W+ ++RM+ A++ + I +
Sbjct: 223 GYTVEYLWRGICYERMEWALRKLYNTYKKETDKIKRNKNKNDERKPCDKGIDVCRDLSVQ 282
Query: 365 ---------LLGHEVEVQMVRNTL---PRRF-----------GAPG----LPEL---NAS 394
+G E ++Q R +L P F G G +P+L NAS
Sbjct: 283 RPTNRGDIGAMGDEGKMQKGRKSLNEGPSIFEYILKGYKEGIGNSGHIFPVPDLPRLNAS 342
Query: 395 QVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKI 454
Q AV++ L R ++LIQGPPGTGKT+ S+AIVY++ K G+VLV APSN AVDQL KI
Sbjct: 343 QEIAVRAALGRKVTLIQGPPGTGKTLVSSAIVYNLVKHYGGKVLVVAPSNTAVDQLTLKI 402
Query: 455 SATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDE 514
TGL+V+R+ ++ RE S V L+LH ++ L K KDE D
Sbjct: 403 HKTGLRVLRVMSRRRECGQSDVNFLSLHENLKELQEGRKK--------KDE----CYGDH 450
Query: 515 KKYKAL-----KRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECL 569
+Y ++ + ++ + A+VI CTCV +G FRF VLIDE+ Q+TEP L
Sbjct: 451 NRYNSIYNDETNESLKKHLLNQAEVITCTCVTSGQKMFNKFRFHYVLIDEAVQSTEPLSL 510
Query: 570 IPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPS 629
IPLV G K++VLVGDH QLGP I+CKK A+AG QSLFERL+ +G+ P L VQYRM
Sbjct: 511 IPLVYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERLISIGVVPYVLSVQYRMDAD 570
Query: 630 LSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNR 689
L E+PS FY G L G + F +P FFYV G+EE+S SGTS++N+
Sbjct: 571 LCEWPSEMFYNGELLTG------GKNFCRFDLGIPTN--FFYVCYGREEVSPSGTSFVNQ 622
Query: 690 TEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVD 749
EA + E I+ + GV +QIGVITPYEGQR+YI+N + GA L E+++VD
Sbjct: 623 AEALHCESIIRHLFKCGVTENQIGVITPYEGQRSYILNRIF--GAEPGNL----EISNVD 676
Query: 750 SFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNG 809
FQGREKD+II+S VRSN +QGIGF+ D RR+NV LTRA++G+VI+GNP L + +W+
Sbjct: 677 GFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVMLTRAKHGLVIIGNPMTLMRHDMWSN 736
Query: 810 LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 847
LL+ Y ++EGPL+NL++ ++ KP K+++ R +
Sbjct: 737 LLSFYDRKGLVMEGPLHNLRRVVI---KPPKLFDFREI 771
>gi|440295047|gb|ELP87976.1| nonsense-mediated mRNA decay protein, putative [Entamoeba invadens
IP1]
Length = 943
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/564 (43%), Positives = 332/564 (58%), Gaps = 33/564 (5%)
Query: 309 EEVALELRASQGVPVDIN--------HGFSVDFVWKSTSFDRMQGAMKTFAVDET----- 355
+++ ++ + GVP++ FS+ F W S F R + A++ F E
Sbjct: 297 KDITVQFEKTPGVPIEKQIITQQHNAMKFSICFQWMSIPFKRKKTALQMFGESEEPHDFP 356
Query: 356 SVSGYIYHHLLG---------------HEVEVQMVRNTLPRRFGAPGLPELNASQVFAVK 400
++S Y+ + LLG E E + ++ + AP LP LN Q V
Sbjct: 357 TMSSYLRNRLLGMPKNPMDMVYEKDFKDEKEAYLAQHPTLQSMNAPNLPTLNQVQYEVVM 416
Query: 401 SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQLAEKISATGL 459
+ +SLIQGPPGTGKTVTSA I+YH G+ VLVCAPSN+AVDQLA KI TG+
Sbjct: 417 KSFTQSLSLIQGPPGTGKTVTSATIIYHAVHSNPGKKVLVCAPSNIAVDQLAAKIVDTGV 476
Query: 460 KVVRLCAKSREAVSSPVEHLTLHYQVRHL--DTSEKSELHKLQQLKDEQGELSSSDEKKY 517
KV+R+ K RE+ + P+ +L V + +K L K + ++E EL+ +D+
Sbjct: 477 KVIRVFGKGRESENEPLYDYSLGKIVDDVMAQMKDKETLEKYKAFREEPEELAEADKNSI 536
Query: 518 KALKRATEREISQSADVICCTCVGAGDPRL--ANFRFRQVLIDESTQATEPECLIPLVLG 575
A+ R E ++ + DVICCTC AGD RL N + VL+DESTQA EPE L+ +
Sbjct: 537 LAVIRDIELKVFRECDVICCTCCVAGDRRLFGINNQIDTVLVDESTQAEEPEVLVCFMNS 596
Query: 576 AKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPS 635
+Q+ LVGDHCQLGPV+ K A + GL +F RL+ LG +P RLQ QYRMHP+LSEF S
Sbjct: 597 VRQIFLVGDHCQLGPVLNSKDARKYGLGLPMFSRLLQLGHEPYRLQFQYRMHPALSEFSS 656
Query: 636 NSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANV 695
++FY+G LQNGVT ERQ + + W V NRPM F G+E ++ TSYLN E +
Sbjct: 657 HTFYDGVLQNGVTALERQFNSLKRFWFVQNRPMMFVATAGKESFGSTATSYLNDEEVTVI 716
Query: 696 EKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGRE 755
I+ + GV P QIGVITPY Q+ I ++++ L + IE+ASVDSFQGRE
Sbjct: 717 RDIIVKMIDCGVSPEQIGVITPYIAQKQAIRVRLTKDTELGVNVMNAIEIASVDSFQGRE 776
Query: 756 KDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
KD+II S VRSN IGFL +P+RLNV++TRA+YG+V++GNP LS PLW+ L +
Sbjct: 777 KDFIIFSTVRSNSTNEIGFLKNPQRLNVSITRAKYGLVVVGNPSTLSSDPLWSLYLQFFI 836
Query: 816 EHECLVEGPLNNLKQSMVQFQKPK 839
+H LV G +NNLK + +K K
Sbjct: 837 DHNVLVHGNINNLKPFPLVLEKKK 860
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C YCG+ + ++RC C ++FCN G SHIV+H+ R+ HKE+ KDS E
Sbjct: 9 CYYCGLRDGKKLLRC---GCGRYFCNGVGEGHISHIVHHIARSTHKELRFPKDSKFRECT 65
Query: 205 LECYNCGCRNVFLLGFISAKTE-SVVVLLCREPCLNMMKESQSKDNVTI-RWDIGLNKKR 262
+EC+ C CRN F+LG+I + ++CRE C + + DN + W + K+
Sbjct: 66 IECFLCRCRNPFVLGYIVLRNNPGTKTVICRE-CRYVETLTTMTDNWDVDSWKPLVQDKK 124
Query: 263 VAYFVFPK-EDNELRL---VPGDELR 284
++ P D E++ V G+E+R
Sbjct: 125 FEEWICPSPSDAEMKFVVGVSGNEMR 150
>gi|407039213|gb|EKE39508.1| regulator of nonsense transcripts, putative [Entamoeba nuttalli
P19]
Length = 937
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/568 (44%), Positives = 334/568 (58%), Gaps = 32/568 (5%)
Query: 303 IKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDET-----SV 357
+ L+ Q ++ +E + P + +S+ F W S F R + A+ F E S+
Sbjct: 296 VLLSRQADIPIEKQIV--TPQNQQFKYSICFQWLSIPFRRKKVALLDFCRTENEPIEASM 353
Query: 358 SGYIYHHLLGHEV-------------EVQMVRNTLPRR--FGAPGLPELNASQVFAVKSV 402
S Y+ LLG + E +M N+ P AP LP LN Q VK
Sbjct: 354 SKYLRDRLLGMPITEMDRQMEQQFKEEKEMYLNSHPTEASLSAPNLPPLNQVQFDVVKKS 413
Query: 403 LQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQLAEKISATGLKV 461
+ +SLIQGPPGTGKTVTSA IVYH+ + G+ VLVCAPSN+AVDQL KI+ TG+KV
Sbjct: 414 FTKQLSLIQGPPGTGKTVTSATIVYHVVQSNPGKKVLVCAPSNIAVDQLGTKITETGVKV 473
Query: 462 VRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALK 521
+R+ +KSRE + +L + +K Q+ KD+ L K K
Sbjct: 474 IRVYSKSREIEDESLYDYSLKTLMEEQLKKDKEMFALYQEYKDDPDSLDIV--SKTTIQK 531
Query: 522 RATEREIS--QSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAK 577
R E E+S + DVICCTC GA D RL+ VLIDESTQA EPECLI L K
Sbjct: 532 RINEIELSLLRETDVICCTCCGALDSRLSGILEHIDTVLIDESTQADEPECLICLNNSVK 591
Query: 578 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNS 637
Q+ LVGDHCQLGP++ +A + GL +F RL+ LG +P RLQ QYRMHP LSEF S +
Sbjct: 592 QLFLVGDHCQLGPILNSPRAKKNGLGLPMFSRLLQLGHEPYRLQFQYRMHPCLSEFSSQT 651
Query: 638 FYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEK 697
FY+G LQNGVT ERQ + + W N+PM F G+E ++GTSYLN E +E+
Sbjct: 652 FYDGVLQNGVTALERQFPSLKYFWFKQNKPMMFIAANGKESYGSNGTSYLNDEEVFLIEQ 711
Query: 698 IVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKD 757
I+ L + V PSQIGVITPY Q+ I++ +S N + + +IE+ASVDSFQGREKD
Sbjct: 712 IIIKMLGNKVSPSQIGVITPYIAQKQAIISRLSLNRRISEAQLNDIEIASVDSFQGREKD 771
Query: 758 YIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+II S VRSNE IGFL+ P+RLNV++TRA+YG+V++GNP+ L + PLW L ++ +
Sbjct: 772 FIIFSTVRSNEISDIGFLSIPQRLNVSITRAKYGLVVVGNPETLMQNPLWCAYLQFFQNN 831
Query: 818 ECLVEGPLNNLKQSMVQF---QKPKKIY 842
LV G L NLK+ ++ + PK IY
Sbjct: 832 NVLVHGQLENLKEYPIKLEPKEAPKAIY 859
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 23/116 (19%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C YCG+++ ++RC C K+FCN GN SHI++H K HKD +
Sbjct: 11 CWYCGLADKKKLIRC---GCGKYFCNGTGNGKVSHIIHHASSLK------HKDLKYSDEY 61
Query: 205 LECYNCGCRNVFLLGFISAKTES-VVVLLCREPCLNMMKESQSKDNVTIR---WDI 256
++C C RN F+LGFI K S + LCR + N TI+ WD+
Sbjct: 62 IQCNLCKTRNPFVLGFIQVKQNSDMTTCLCR----------TCRYNTTIKNLGWDV 107
>gi|402470074|gb|EJW04529.1| hypothetical protein EDEG_01257 [Edhazardia aedis USNM 41457]
Length = 534
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/491 (47%), Positives = 318/491 (64%), Gaps = 41/491 (8%)
Query: 386 PGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 445
P LP LN+SQ AVK+ L ++LIQGPPGTGKTVT AA+VY++ KQ +G+VLV + SN
Sbjct: 52 PNLPFLNSSQQIAVKAALHNQLTLIQGPPGTGKTVTCAAVVYNLVKQFKGKVLVVSNSNT 111
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
A+D LA KI + LKV+R+ +K RE S +E L+LH Q + L EK K ++
Sbjct: 112 AIDHLAVKIHHSALKVIRIVSKRRENCSDELEFLSLHMQAKILLKEEKKR-GKTKRSTKN 170
Query: 506 QGELS-----------------SSDEKKYK-----------ALKRATEREISQSADVICC 537
ELS + D KK K ALK R+I +ADVICC
Sbjct: 171 TAELSEDSNTENQYSVKDTFNANKDRKKSKTAHLESNSDDDALKYKMMRKILDNADVICC 230
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TCV +G L + VLIDE+ Q TEP +IPL G ++++LVGDH QLGP+I+ KKA
Sbjct: 231 TCVTSGQKILKKYDIPYVLIDEAVQCTEPLSIIPLAYGCRKLILVGDHKQLGPIILDKKA 290
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
A+AGL ++LFERL+ LG P L +QYRMHP L+E+PSN+FYEG+L+NG++ ++R + +
Sbjct: 291 AKAGLKETLFERLIKLGNLPFLLNMQYRMHPKLAEWPSNTFYEGSLKNGISESKRLNRTV 350
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
P+P FFYV G EE+SASGTSYLN+TEA E+I+ + ++SG+ QIGVITP
Sbjct: 351 -LPFPT-----FFYVCYGLEELSASGTSYLNQTEALVTEEIIKSLVKSGISEKQIGVITP 404
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
YEGQR +I+N +++ + L E+ +VD++QGREKDYII+S VRSN+ QGIGFLND
Sbjct: 405 YEGQRVFILNRLTKTSLKLENL----EIKNVDAYQGREKDYIIISLVRSNQKQGIGFLND 460
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
RRLNV LTRA+YG I+GNP L K +W + Y++ + + +G + L++++V +
Sbjct: 461 ERRLNVTLTRAKYGCCIIGNPNTLYKNKMWANFINFYQDRDMIYKGSVECLEKAIVVKKS 520
Query: 838 PKKIYNDRRLF 848
P + + R LF
Sbjct: 521 P--MVDLRALF 529
>gi|67481561|ref|XP_656130.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56473310|gb|EAL50744.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704720|gb|EMD44907.1| Hypothetical protein EHI5A_012990 [Entamoeba histolytica KU27]
Length = 937
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/566 (43%), Positives = 330/566 (58%), Gaps = 28/566 (4%)
Query: 303 IKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDET-----SV 357
+ L+ Q ++ +E + P + +S+ F W S F R + A+ F E S+
Sbjct: 296 VLLSRQADIPIEKQIV--TPQNQQFKYSICFQWLSIPFHRKKEALLDFCRTENEPIEASM 353
Query: 358 SGYIYHHLLGHEV-------------EVQMVRNTLPRR--FGAPGLPELNASQVFAVKSV 402
S Y+ LLG + E +M N+ P AP LP LN Q V+
Sbjct: 354 SKYLRDRLLGMPITEMDRQMEQQFKEEKEMYLNSHPTEASLSAPNLPPLNQVQFDVVRKS 413
Query: 403 LQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQLAEKISATGLKV 461
+ +SLIQGPPGTGKTVTSA IVYH+ + G+ VLVCAPSN+AVDQL KI+ TG+KV
Sbjct: 414 FTKQLSLIQGPPGTGKTVTSATIVYHVVQSNPGKKVLVCAPSNIAVDQLGTKITETGVKV 473
Query: 462 VRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALK 521
+R+ +KSRE + +L + +K Q+ KD+ L +
Sbjct: 474 IRVYSKSRETEDESLYDYSLKTLMEEKLKKDKEMFALYQEYKDDPDSLDFVSTATIQKRI 533
Query: 522 RATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQV 579
E + + DVICCTC GA D RL+ VLIDESTQA EPECLI L KQ+
Sbjct: 534 NQIELSLLRETDVICCTCCGALDTRLSGILEHIDTVLIDESTQADEPECLICLNNSVKQL 593
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFY 639
LVGDHCQLGP++ +A + GL +F RL+ LG +P RLQ QYRMHP LSEF S +FY
Sbjct: 594 FLVGDHCQLGPILNSSRAKKYGLGLPMFSRLLQLGHEPYRLQFQYRMHPCLSEFSSQTFY 653
Query: 640 EGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIV 699
+G LQNGVT ERQ + + W N+PM F G+E ++GTSY+N E +E+I+
Sbjct: 654 DGVLQNGVTALERQFPSLKYFWFKQNKPMMFIAANGKESYGSNGTSYINDEEVFIIEQII 713
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
L + V PSQIGVITPY Q+ I++ +S N + + +IE+ASVDSFQGREKD+I
Sbjct: 714 IKMLGNKVSPSQIGVITPYIAQKQAIISRLSLNRRISEAQLNDIEIASVDSFQGREKDFI 773
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHEC 819
I S VRSNE IGFL+ P+RLNV++TRA+YG+V++GNP+ L + PLW L ++ +
Sbjct: 774 IFSTVRSNEISDIGFLSIPQRLNVSITRAKYGLVVVGNPETLMQNPLWCAYLQFFQNNNV 833
Query: 820 LVEGPLNNLKQSMVQF---QKPKKIY 842
LV G L NLK+ ++ + PK IY
Sbjct: 834 LVHGQLENLKEYPIKLEPKEAPKAIY 859
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 23/116 (19%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C YCG+++ ++RC C K+FCN GN SHI++H K HKD +
Sbjct: 11 CWYCGLADKKKLIRC---GCGKYFCNGTGNGKVSHIIHHASSLK------HKDLKYSDEY 61
Query: 205 LECYNCGCRNVFLLGFISAKTES-VVVLLCREPCLNMMKESQSKDNVTIR---WDI 256
++C C RN F+LGFI K S + LCR + N TI+ WD+
Sbjct: 62 IQCNLCKTRNPFVLGFIQVKQNSDMTTCLCR----------TCRYNTTIKNLGWDV 107
>gi|443913950|gb|ELU36263.1| ATP dependent helicase [Rhizoctonia solani AG-1 IA]
Length = 517
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/330 (66%), Positives = 259/330 (78%), Gaps = 7/330 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KESQ++D+V +RWD GLN+KR+A+F FPK E E+RL GDELRLRY GD+ H AW+
Sbjct: 180 LKESQTQDDVVVRWDQGLNQKRIAWFNFPKLESGEVRLAVGDELRLRYHGDSHH-AWEGS 238
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHV+K+ +E+ LELR + GVPVD HGFSVDFVWKSTSFDRMQ AMKTFA+DE SV
Sbjct: 239 GHVLKIPNNISDEIGLELRRNDGVPVDCTHGFSVDFVWKSTSFDRMQLAMKTFAIDEKSV 298
Query: 358 SGYIYHH-LLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
SGYI H++E ++R +P+RF APGLPELN SQ++AVKSVLQ+PISLIQGPPGT
Sbjct: 299 SGYIVSKPSYCHDLEPTILRTQMPKRFSAPGLPELNHSQMYAVKSVLQKPISLIQGPPGT 358
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA+IVYH+AK GQVLVCAPSNVAVDQL EKI ATGLKVVRL AKSREA+ S +
Sbjct: 359 GKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLTAKSREALESSI 418
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
LTLH QV + +EL KL QLK+E GELS SDE+KYK L R EREI +ADVIC
Sbjct: 419 AFLTLHRQVAAY--TSHTELQKLIQLKNELGELSQSDERKYKTLVRNVEREILAAADVIC 476
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEP 566
CTCVG GDPRL+ +FR VLIDE+TQA EP
Sbjct: 477 CTCVGTGDPRLSKLKFRTVLIDEATQAAEP 506
>gi|167384498|ref|XP_001736978.1| nonsense-mediated mRNA decay protein [Entamoeba dispar SAW760]
gi|165900437|gb|EDR26756.1| nonsense-mediated mRNA decay protein, putative [Entamoeba dispar
SAW760]
Length = 937
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/566 (43%), Positives = 328/566 (57%), Gaps = 28/566 (4%)
Query: 303 IKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDET-----SV 357
+ L+ Q ++ +E + P + +S+ F W S F R + A+ F E S+
Sbjct: 296 VLLSRQADIPIEKQIV--TPQNQQFKYSICFHWLSIPFRRKRMALLDFCRTEVEPIAASM 353
Query: 358 SGYIYHHLLG---------------HEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSV 402
S Y+ LLG E E+ + R+ AP LP LN Q V+
Sbjct: 354 SKYLRDRLLGMPITEIDRQMEQQFKEEKEMYLSRHPTEASLSAPNLPPLNQVQFDVVRKS 413
Query: 403 LQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQLAEKISATGLKV 461
+ +SLIQGPPGTGKTVTSA IVYH+ + G+ VLVCAPSN+AVDQL KI TG+KV
Sbjct: 414 FTKQLSLIQGPPGTGKTVTSATIVYHVVQSNPGKKVLVCAPSNIAVDQLGIKIIETGVKV 473
Query: 462 VRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALK 521
+R+ +KSRE + +L + +K Q KD+ L ++ +
Sbjct: 474 IRVYSKSRELAEESLHDYSLKTLMIEQLKKDKEMFLLYQDYKDDPDSLDIVNKTAIQKRI 533
Query: 522 RATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQV 579
E + + DVICCTC GA D RL VLIDESTQA EPECLI L KQ+
Sbjct: 534 NEIELALLRETDVICCTCCGALDNRLNGILEHIDTVLIDESTQADEPECLICLNNSVKQL 593
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFY 639
LVGDHCQLGP++ +A + GL +F RL+ LG +P RLQ QYRMHP LSEF S +FY
Sbjct: 594 FLVGDHCQLGPILNSSRAKKNGLGLPMFSRLLQLGHEPYRLQFQYRMHPCLSEFSSQTFY 653
Query: 640 EGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIV 699
+G LQNGVT ERQ + + W N+PM F G+E ++GTSYLN E +E+I+
Sbjct: 654 DGVLQNGVTALERQFPSLKYFWFKQNKPMMFIAANGKESYGSNGTSYLNDEEVFIIEQII 713
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
L + V PSQIGVITPY Q+ I++ +S N + + +IE+ASVDSFQGREKD+I
Sbjct: 714 IKMLVNKVDPSQIGVITPYIAQKQAIISRLSLNRRVSEAQLNDIEIASVDSFQGREKDFI 773
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHEC 819
I S VRSNE IGFL+ P+RLNV++TRA+YG+V++GNP+ L + PLW L ++ +
Sbjct: 774 IFSTVRSNEISDIGFLSIPQRLNVSITRAKYGLVVVGNPETLMQNPLWCAYLQFFQNNNV 833
Query: 820 LVEGPLNNLKQSMVQF---QKPKKIY 842
LV G L NLK+ ++ + PK IY
Sbjct: 834 LVHGQLENLKEYPIKLEPKEAPKAIY 859
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C YCG+++ ++RC C K+FCN G+ SHI++H+ K HKD +
Sbjct: 11 CWYCGLADKKKLIRC---GCGKYFCNGTGDGKVSHIIHHVSSLK------HKDLKYSDEY 61
Query: 205 LECYNCGCRNVFLLGFISAKTES-VVVLLCR 234
++C C RN F+LGF+ K S + LCR
Sbjct: 62 IQCNLCKTRNPFVLGFLQVKQNSDMTTCLCR 92
>gi|392512894|emb|CAD25885.2| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
Length = 776
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 270/659 (40%), Positives = 370/659 (56%), Gaps = 90/659 (13%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY------------- 287
+KES ++NV +RW+ K + YF F D+EL++ GDE+RL +
Sbjct: 148 IKESMRQENVFVRWE----KMKYCYFYFQNGDSELKINVGDEIRLTHKSGLVLHGFVSGE 203
Query: 288 ------------------SGDAAHPAWQSVGH------VIKL--TAQEEVALELR----- 316
SG W+ V + + KL T + EV R
Sbjct: 204 TFSEELKVEIETPGDYPRSGYTVEYLWRGVCYERMVWALKKLYSTYKREVDRNKRNRNKD 263
Query: 317 -----ASQGVP--VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDET-SVSGYIYHHLLGH 368
+G+ D + S+ V DR +G ++DE S+ YI L GH
Sbjct: 264 DGKKLEDKGIDEGKDPDKKKSMYGVEGDVGVDRRKGVRAKKSLDEGPSIFEYI---LKGH 320
Query: 369 EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYH 428
+ + F +P LP+LNASQ AV++ L R ++LIQGPPGTGKT+ S+AIVY+
Sbjct: 321 KEGI----GNFDHIFSSPNLPKLNASQEVAVRAALGRKVTLIQGPPGTGKTLVSSAIVYN 376
Query: 429 MAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHL 488
+ + G+VLV APSN AVDQL KI TGL+V+R+ ++ RE S V L+LH +R L
Sbjct: 377 LVRHYGGKVLVVAPSNTAVDQLTLKIHKTGLRVLRVMSRRREYGQSDVSFLSLHENLREL 436
Query: 489 DTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLA 548
K KDE + S D + + ++++ A+VI CTCV +G
Sbjct: 437 QEGRKR--------KDE--DHSRYDSIYNDEVNESLKKQLLNQAEVITCTCVTSGQKMFN 486
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
F+F VLIDE+ Q+TEP LIPLV G K++VLVGDH QLGP I+CKK A+AG QSLFE
Sbjct: 487 RFKFHCVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFE 546
Query: 609 RLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
RL+ +G+ P L VQYRM L E+PS FY G L G + D PV
Sbjct: 547 RLISIGVVPYMLSVQYRMDADLCEWPSEMFYNGELLTG----GKNFCRFDLGIPVN---- 598
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNY 728
FFYV G+EE+SASGTS++N+ EA E I+ + GV SQIGVITPYEGQR+YI+N
Sbjct: 599 FFYVCYGREEVSASGTSFVNQAEALYCESIIRHLFKCGVTESQIGVITPYEGQRSYILNR 658
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
+ GA L E+++VD FQGREKD+II+S VRSN +QGIGF+ D RR+NV LTRA
Sbjct: 659 IF--GAEPGNL----EISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRA 712
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 847
++G+VI+GNP L K +W LL+ Y ++EGPL+NLK+ ++ KP K+++ + +
Sbjct: 713 KHGLVIIGNPMTLMKHDMWGNLLSFYDRKGLVMEGPLHNLKRVII---KPPKLFDFKEI 768
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 77/263 (29%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C+YC + ++ C +C K FCNSR +S SHIV HLV+AKHK + ++ D
Sbjct: 3 CQYCEAAE--LLIEC--ITCGKCFCNSRSASSISHIVFHLVKAKHKSIRINGD------- 51
Query: 205 LECYNCGCRNVFLL----GFISAKTESVVVLLCREPCLNMMK------------------ 242
++C CG N+F L G I S +L E CL ++K
Sbjct: 52 IKCRKCGEDNLFKLLENGGKIFCNGCSSGKMLVEERCLTIVKSPEVQGRRLTKQQMAEME 111
Query: 243 ---------------------------ESQSKDNVTIR-----WDIGLNKKRVAYFVFPK 270
E++ + I+ ++ + +++ Y F
Sbjct: 112 ERNVSPLPHVKPRFEAKEYVEVFSSLIEAECRKEREIKESMRQENVFVRWEKMKYCYFYF 171
Query: 271 EDNE--LRLVPGDELRLRY-SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINH 327
++ + L++ GDE+RL + SG H G V T EE+ +E+ P
Sbjct: 172 QNGDSELKINVGDEIRLTHKSGLVLH------GFVSGETFSEELKVEIETPGDYP---RS 222
Query: 328 GFSVDFVWKSTSFDRMQGAMKTF 350
G++V+++W+ ++RM A+K
Sbjct: 223 GYTVEYLWRGVCYERMVWALKKL 245
>gi|19074775|ref|NP_586281.1| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
gi|449329865|gb|AGE96133.1| mRNA decay control [Encephalitozoon cuniculi]
Length = 782
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 270/659 (40%), Positives = 370/659 (56%), Gaps = 90/659 (13%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRY------------- 287
+KES ++NV +RW+ K + YF F D+EL++ GDE+RL +
Sbjct: 154 IKESMRQENVFVRWE----KMKYCYFYFQNGDSELKINVGDEIRLTHKSGLVLHGFVSGE 209
Query: 288 ------------------SGDAAHPAWQSVGH------VIKL--TAQEEVALELR----- 316
SG W+ V + + KL T + EV R
Sbjct: 210 TFSEELKVEIETPGDYPRSGYTVEYLWRGVCYERMVWALKKLYSTYKREVDRNKRNRNKD 269
Query: 317 -----ASQGVP--VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDET-SVSGYIYHHLLGH 368
+G+ D + S+ V DR +G ++DE S+ YI L GH
Sbjct: 270 DGKKLEDKGIDEGKDPDKKKSMYGVEGDVGVDRRKGVRAKKSLDEGPSIFEYI---LKGH 326
Query: 369 EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYH 428
+ + F +P LP+LNASQ AV++ L R ++LIQGPPGTGKT+ S+AIVY+
Sbjct: 327 KEGI----GNFDHIFSSPNLPKLNASQEVAVRAALGRKVTLIQGPPGTGKTLVSSAIVYN 382
Query: 429 MAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHL 488
+ + G+VLV APSN AVDQL KI TGL+V+R+ ++ RE S V L+LH +R L
Sbjct: 383 LVRHYGGKVLVVAPSNTAVDQLTLKIHKTGLRVLRVMSRRREYGQSDVSFLSLHENLREL 442
Query: 489 DTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLA 548
K KDE + S D + + ++++ A+VI CTCV +G
Sbjct: 443 QEGRKR--------KDE--DHSRYDSIYNDEVNESLKKQLLNQAEVITCTCVTSGQKMFN 492
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
F+F VLIDE+ Q+TEP LIPLV G K++VLVGDH QLGP I+CKK A+AG QSLFE
Sbjct: 493 RFKFHCVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFE 552
Query: 609 RLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
RL+ +G+ P L VQYRM L E+PS FY G L G + D PV
Sbjct: 553 RLISIGVVPYMLSVQYRMDADLCEWPSEMFYNGELLTG----GKNFCRFDLGIPVN---- 604
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNY 728
FFYV G+EE+SASGTS++N+ EA E I+ + GV SQIGVITPYEGQR+YI+N
Sbjct: 605 FFYVCYGREEVSASGTSFVNQAEALYCESIIRHLFKCGVTESQIGVITPYEGQRSYILNR 664
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
+ GA L E+++VD FQGREKD+II+S VRSN +QGIGF+ D RR+NV LTRA
Sbjct: 665 IF--GAEPGNL----EISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRA 718
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 847
++G+VI+GNP L K +W LL+ Y ++EGPL+NLK+ ++ KP K+++ + +
Sbjct: 719 KHGLVIIGNPMTLMKHDMWGNLLSFYDRKGLVMEGPLHNLKRVII---KPPKLFDFKEI 774
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 77/266 (28%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
E C+YC + ++ C +C K FCNSR +S SHIV HLV+AKHK + ++ D
Sbjct: 6 EMKCQYCEAAE--LLIEC--ITCGKCFCNSRSASSISHIVFHLVKAKHKSIRINGD---- 57
Query: 202 ETILECYNCGCRNVFLL----GFISAKTESVVVLLCREPCLNMMK--------------- 242
++C CG N+F L G I S +L E CL ++K
Sbjct: 58 ---IKCRKCGEDNLFKLLENGGKIFCNGCSSGKMLVEERCLTIVKSPEVQGRRLTKQQMA 114
Query: 243 ------------------------------ESQSKDNVTIR-----WDIGLNKKRVAYFV 267
E++ + I+ ++ + +++ Y
Sbjct: 115 EMEERNVSPLPHVKPRFEAKEYVEVFSSLIEAECRKEREIKESMRQENVFVRWEKMKYCY 174
Query: 268 FPKEDNE--LRLVPGDELRLRY-SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVD 324
F ++ + L++ GDE+RL + SG H G V T EE+ +E+ P
Sbjct: 175 FYFQNGDSELKINVGDEIRLTHKSGLVLH------GFVSGETFSEELKVEIETPGDYP-- 226
Query: 325 INHGFSVDFVWKSTSFDRMQGAMKTF 350
G++V+++W+ ++RM A+K
Sbjct: 227 -RSGYTVEYLWRGVCYERMVWALKKL 251
>gi|429961769|gb|ELA41314.1| hypothetical protein VICG_01687 [Vittaforma corneae ATCC 50505]
Length = 575
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/604 (40%), Positives = 353/604 (58%), Gaps = 83/604 (13%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KE+ ++N+T+ D K F+ K +++ ++ GDEL+ + P VG
Sbjct: 26 IKENMKQENMTLLIDGCYCK-----FIVQKTNSDFKVNVGDELKF-----SQRPGLSFVG 75
Query: 301 HVIKLTAQEEVALELRASQGVPVDIN-------------HGFSVDFVWKSTSFDRMQGAM 347
+V +E+ + +R V +D++ +G++V+F+W T+++RM+ A+
Sbjct: 76 YV----CEEQFSDLIR----VKIDVDSLPSGHTLENIPRNGYTVEFIWNPTTYNRMKNAL 127
Query: 348 KTFAVDETSVSGYIYHHLL-GHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRP 406
++ + S + I+ ++L G + ++ + P++F A LN SQ AVK+ L R
Sbjct: 128 QSLYNKKKSNT--IFKYILKGVKETMKEIEVFQPKKFFA-----LNQSQEIAVKAALTRT 180
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
++LIQGPPGTGKT+ SA IVY++ K +VLV APSN A DQLA KI+ TGLKV+R+ +
Sbjct: 181 LTLIQGPPGTGKTMVSAVIVYNLVKHYGKKVLVVAPSNTAADQLAIKINDTGLKVLRIMS 240
Query: 467 KSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATER 526
K RE VS+ V+ L LH + K+ A++R
Sbjct: 241 KRREDVSTDVDFLCLHKLLNEFFIDSKN----------------------------ASQR 272
Query: 527 EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
+ + A+V+CCTCV AG L F F VLIDE+ Q+TEP L+P V ++++LVGDH
Sbjct: 273 NLLEMAEVVCCTCVTAGQKILKEFEFPFVLIDEAVQSTEPLSLVPCVYSPEKLILVGDHK 332
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNG 646
QLGP I+ K + G QSLFERL+ +G+ P L VQYRMHP L FPS FY G L++G
Sbjct: 333 QLGPTILNKDVVKYGFKQSLFERLLRIGVMPYLLSVQYRMHPDLCAFPSEYFYNGLLKSG 392
Query: 647 VTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG 706
+ S +D P FFYV G+EEIS S TS+ N++EA VE I+ ++G
Sbjct: 393 TS----TSKVLDLP------NNFFYVCDGKEEISQSRTSFFNKSEAVIVENIIRFLFKNG 442
Query: 707 VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS 766
V+ QIGVITPYEGQR+YI+ + N A +E+ +VD FQGREKD+II+S VRS
Sbjct: 443 VLEQQIGVITPYEGQRSYILGQIFGNEA------GNLEIKNVDGFQGREKDFIIVSLVRS 496
Query: 767 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLN 826
N QG+GF+ D RR+NV LTRA++G++I+GNP L K +W LL Y E + EGPLN
Sbjct: 497 NIFQGVGFVGDKRRMNVTLTRAKHGLIIIGNPFTLYKNEMWADLLNWYDERGLVYEGPLN 556
Query: 827 NLKQ 830
+LK+
Sbjct: 557 SLKR 560
>gi|396082359|gb|AFN83969.1| putative DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 779
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 261/664 (39%), Positives = 367/664 (55%), Gaps = 97/664 (14%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDN--------ELRL--------------- 277
+KES ++NV +RW+ K + YF F DN E+RL
Sbjct: 148 IKESMRQENVFVRWE----KMKYCYFYFQNGDNELKINIGDEIRLTHKSGFVLNGFVSGE 203
Query: 278 -----------VPGDELRLRYSGDAAHPAWQSVGH------VIKL--TAQEEVALELRAS 318
+PGD R SG W+ V + + KL T ++E+ +
Sbjct: 204 TFSEELKVEVEIPGDYPR---SGYTVEYLWRGVCYERMEWALRKLYNTYKKEIGKNKKNK 260
Query: 319 QGVPVDINHGFSVDF---VWKSTSFDRMQGA------MKTFAVDETSVSGYIYHHLL-GH 368
H +D + K D ++G T A + I+ ++L G+
Sbjct: 261 SNNDEKGLHEEEIDANRSLGKRKPLDCIEGRNGPDGRKATKAKKNLNEGPSIFEYILKGY 320
Query: 369 EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYH 428
+ + + + F P LP+LN SQ AV++ L R ++LIQGPPGTGKT+ S++IVY+
Sbjct: 321 KEGISNIDHI----FSPPNLPKLNTSQETAVRAALGRKVTLIQGPPGTGKTLVSSSIVYN 376
Query: 429 MAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHL 488
K G+VLV APSN AVDQL KI TGLKV+R+ ++ RE S V L+LH +R L
Sbjct: 377 FVKHYGGKVLVVAPSNTAVDQLTLKIHKTGLKVLRVMSRRRECGQSDVSFLSLHENLREL 436
Query: 489 DTSEKSELHKLQQLKDEQGELSSSDEKKYKAL-----KRATEREISQSADVICCTCVGAG 543
K KDE D +Y ++ + ++++ A+VI CTCV +G
Sbjct: 437 QEGRKK--------KDE----GCRDNGRYNSIYNDEVSESLKKQLLNQAEVITCTCVTSG 484
Query: 544 DPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
FRF VLIDE+ Q+TEP LIPLV G K++VLVGDH QLGP I+CKK A+AG
Sbjct: 485 QKMFNKFRFHYVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDHKQLGPTILCKKVAQAGFK 544
Query: 604 QSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV 663
QSLFERL+ +G+ P L +QYRM L E+PS FY G L G ++ D P
Sbjct: 545 QSLFERLISIGVVPYVLSIQYRMDTDLCEWPSEMFYNGELLTG----GKRFCRFDLGIPT 600
Query: 664 PNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRA 723
FFYV G+EE+SASGTS++N+ EA E I+ + GV +QIGVITPYEGQR+
Sbjct: 601 N----FFYVCYGREEVSASGTSFINQAEALYCESIIRHLFKCGVTENQIGVITPYEGQRS 656
Query: 724 YIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNV 783
YI+N + GA L E+++VD FQGREKD+II+S VRSN +QGIGF+ D RR+NV
Sbjct: 657 YILNRIF--GAEPGNL----EISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNV 710
Query: 784 ALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYN 843
LTRA++G+VI+GNP L K +W+ LL+ Y + ++EGPL+NL++ ++ KP K+++
Sbjct: 711 TLTRAKHGLVIIGNPTTLMKHDMWSNLLSFYDKKGLVMEGPLHNLRRVII---KPPKLFD 767
Query: 844 DRRL 847
+ +
Sbjct: 768 FKEM 771
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 106/264 (40%), Gaps = 79/264 (29%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C+YC + ++ C +C K FCNS +S SHIV HLV+A+HK + + D
Sbjct: 3 CQYCEAAEF--LIEC--ITCGKHFCNSHSASSISHIVFHLVKARHKSIRIGGD------- 51
Query: 205 LECYNCGCRNVFLL----GFISAKTESVVVLLCREPCLNMMK---------------ESQ 245
++C CG N+F L G I L E CL ++K E +
Sbjct: 52 IKCRKCGEDNLFKLLDSNGKIFCNACGSGRTLVEERCLTIIKSPEVQGRRLTKQQMAEME 111
Query: 246 SKD-----NVTIRWDIG--------------------------------LNKKRVAYFVF 268
K+ V R++ G K + YF F
Sbjct: 112 EKNVPSLPQVKPRFEAGEYVEVFSSLIEAECRKEREIKESMRQENVFVRWEKMKYCYFYF 171
Query: 269 PKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIK-LTAQEEVALELRASQGVPVDI-N 326
DNEL++ GDE+RL + G V+ + E + EL+ +P D
Sbjct: 172 QNGDNELKINIGDEIRLTHKS----------GFVLNGFVSGETFSEELKVEVEIPGDYPR 221
Query: 327 HGFSVDFVWKSTSFDRMQGAMKTF 350
G++V+++W+ ++RM+ A++
Sbjct: 222 SGYTVEYLWRGVCYERMEWALRKL 245
>gi|355727790|gb|AES09311.1| UPF1 regulator of nonsense transcripts-like protein [Mustela
putorius furo]
Length = 530
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/285 (69%), Positives = 238/285 (83%), Gaps = 5/285 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ++DN+T+RWD+GLNKKR+AYF PK D+++RL+ GDE+ LRY GD A P W+ +G
Sbjct: 248 LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIG 306
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ +E+A+ELR+S G PV++ H F VDFVWKSTSFDRMQ A+KTFAVDETSVS
Sbjct: 307 HVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 366
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
GYIYH LLGHEVE +++ LP+RF A GLP+LN SQV+AVK+VLQRP+SLIQGPPGTGK
Sbjct: 367 GYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 426
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVYH+A+QG G VLVCAPSN+AVDQL EKI TGLKVVRLCAKSREA+ SPV
Sbjct: 427 TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF 486
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRA 523
L LH Q+R++D+ EL KLQQLKDE GELSS+DEK+Y+ALKR
Sbjct: 487 LALHNQIRNMDSM--PELQKLQQLKDETGELSSADEKRYRALKRT 529
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 111/156 (71%), Gaps = 15/156 (9%)
Query: 100 KRGANNSSNTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
+ GA + S TSQ+ +A L+FEE +D Y D HAC YCG+ +PACVV C
Sbjct: 10 QNGAVDDSVAKTSQL---LAELNFEEDEEDT----YYTKDLPVHACSYCGIHDPACVVYC 62
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
N + +KWFCN RGNTSGSHIVNHLVRAK KEV LHKD PLGET+LECYNCGCRNVFLLG
Sbjct: 63 N--TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 120
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
FI AK +SVVVLLCR+PC + +S KD I WD
Sbjct: 121 FIPAKADSVVVLLCRQPCAS---QSSLKD---INWD 150
>gi|68070943|ref|XP_677385.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497484|emb|CAH99909.1| hypothetical protein PB000602.03.0 [Plasmodium berghei]
Length = 426
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/327 (60%), Positives = 240/327 (73%), Gaps = 20/327 (6%)
Query: 532 ADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
ADVIC TCVGA D RL FRF QVL+DE+TQ+TEPECL+PLV GAKQ+VLVGDHCQLGP+
Sbjct: 3 ADVICTTCVGAMDKRLKKFRFNQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPI 62
Query: 592 IMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE 651
I+CKKAA +GL +SLFERL++LG+ P RL+VQYRMHP LSEFPS FY+G LQNG+T+ E
Sbjct: 63 IVCKKAASSGLGKSLFERLMMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKE 122
Query: 652 RQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ 711
R+ +FPWP PMFFY G EE+SASGTSYLNR EA N+E +V L SG+ +Q
Sbjct: 123 REYPLKNFPWPNSKYPMFFYNSNGLEEMSASGTSYLNRNEAQNMEILVRALLNSGLKATQ 182
Query: 712 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
IGVITPYEGQRAYI + +N + + L +IEVASVD+FQGREKD+I+LSCVRSN+ G
Sbjct: 183 IGVITPYEGQRAYITSLFQKNISYQHCL--DIEVASVDAFQGREKDFILLSCVRSNKKLG 240
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSK------------------QPLWNGLLTH 813
IGFLNDPRRLNVALTRA+YG++I GN KVLS+ +W LL
Sbjct: 241 IGFLNDPRRLNVALTRAKYGLIICGNAKVLSRHHFISKEKINSNETITNVNSVWINLLNQ 300
Query: 814 YKEHECLVEGPLNNLKQSMVQFQKPKK 840
+K+ +VEG L+NLK + P K
Sbjct: 301 FKKKNLIVEGCLSNLKPITINIPTPVK 327
>gi|307188109|gb|EFN72941.1| Putative regulator of nonsense transcripts 1 [Camponotus
floridanus]
Length = 840
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/295 (61%), Positives = 227/295 (76%), Gaps = 5/295 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYFV K D +++L+ GDELRLRY G+ H W +G
Sbjct: 304 LKESQTQENIEVRWDVGLNKKTIAYFVLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 362
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ E+V +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 363 HVIKIPDNYGEDVGIELKNNSGAPTECVTNFVVDFIWKSTSFDRMQSALRKFAVDDTSVS 422
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 423 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 482
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 483 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 542
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
L LH Q+++L+T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++AD
Sbjct: 543 LALHNQIKNLETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAAD 595
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 126/200 (63%), Gaps = 22/200 (11%)
Query: 87 RHSDSLAATSSPSKRGANNSSNTSTSQI---VEGMAGLSFEETGDDVEGFEYGKADFTEH 143
+H + +S P + N S++ +I + +A L FEE ++ Y D EH
Sbjct: 50 QHDATQTQSSQPVQVNGTNGSSSLDLKISGAAQSLAELQFEEEEEEA----YYNRDLPEH 105
Query: 144 ACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGET 203
AC+YCG+ +CVV CNV CRKWFCN RGNTSGSHI+NHLVRAKHKEV LHKD PLGET
Sbjct: 106 ACKYCGIHEASCVVMCNV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGET 163
Query: 204 ILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD------IG 257
+LECY+C RNVF+LGFI A+ +SVVVLLCR+PC +S KD + WD +
Sbjct: 164 VLECYSCATRNVFVLGFIPARADSVVVLLCRQPC---AAQSSLKD---MNWDQEQWKPLI 217
Query: 258 LNKKRVAYFV-FPKEDNELR 276
++ +++ V P E +LR
Sbjct: 218 EDRSFLSWLVKIPSEQEQLR 237
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 104/256 (40%), Gaps = 56/256 (21%)
Query: 801 LSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGAGPGIVPNDI 860
L K+ LL E + LVEGPLNNLK+SM+QF KPKK+ N A PG + +
Sbjct: 581 LLKKAAEKELLEAADEQKVLVEGPLNNLKESMIQFAKPKKLVN------AANPG--SHFM 632
Query: 861 STSNPNA----------DRRGSRARGYMPPGPPNGTHKPGLHPAGFPMPRVPLPPFQGGP 910
STS +A DR G++ G H P + VPL F
Sbjct: 633 STSMYDAREALIPGSVYDRSGTQVNGMQ-------NHNP------YYQRNVPLDIFSRTH 679
Query: 911 PSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSHLQHQQNTQ------- 963
+ Y P R A+++VP P G A P + QHQQ Q
Sbjct: 680 DTISYISPERAQ-----AAMNNVPVP----LGMFMNMAHVPPRFYNQHQQALQARQNQRN 730
Query: 964 QPIGTIGSTFNF--PSLENSNSQPSVGG-PLTQPGF-VNNMPVQGPSQ----TFRDGFSV 1015
+ T S N P + NSQ P +QPG + QG SQ + G S
Sbjct: 731 RRGATAASVRNKSGPRMGKMNSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQ 790
Query: 1016 GSMSQD-FLGDDFKSQ 1030
+SQD F +F+SQ
Sbjct: 791 AELSQDSFAVGEFQSQ 806
>gi|332029845|gb|EGI69714.1| Putative regulator of nonsense transcripts 1 [Acromyrmex
echinatior]
Length = 838
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/295 (61%), Positives = 227/295 (76%), Gaps = 5/295 (1%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVG 300
+KESQ+++N+ +RWD+GLNKK +AYF+ K D +++L+ GDELRLRY G+ H W +G
Sbjct: 304 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGEL-HKPWSGIG 362
Query: 301 HVIKLTAQ--EEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVS 358
HVIK+ EEV +EL+ + G P + F VDF+WKSTSFDRMQ A++ FAVD+TSVS
Sbjct: 363 HVIKIPDNYGEEVGIELKNNSGAPTECISNFVVDFIWKSTSFDRMQSALRKFAVDDTSVS 422
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
YIYH LLGHEVE + R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGK
Sbjct: 423 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 482
Query: 419 TVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH 478
TVTSA IVY + KQ G VLVCAPSN AVDQL EKI + LKVVRLCAKSREA+ SPV
Sbjct: 483 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 542
Query: 479 LTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
L LH Q+++++T+ +EL KLQQLKDE GELSS DEK+Y+ LK+A E+E+ ++AD
Sbjct: 543 LALHNQIKNMETN--TELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAAD 595
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 120/184 (65%), Gaps = 21/184 (11%)
Query: 102 GANNSS--NTSTSQIVEGMAGLSFEETGDDVEGFEYGKADFTEHACRYCGVSNPACVVRC 159
G N SS + S + +A L FEE ++ Y D +HAC+YCG+ +CVV C
Sbjct: 66 GTNGSSSLDLKISGAAQSLAELQFEEEEEEA----YYNRDLPDHACKYCGIHEASCVVMC 121
Query: 160 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 219
NV CRKWFCN RGNTSGSHI+NHLVRAKHKEV LH+D PLGET+LECY+C RNVF+LG
Sbjct: 122 NV--CRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCATRNVFVLG 179
Query: 220 FISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD------IGLNKKRVAYFV-FPKED 272
FI AK +SVVVLLCR+PC ++ KD + WD + ++ +++ V FP E
Sbjct: 180 FIPAKADSVVVLLCRQPC---AAQTSLKD---MNWDQEQWKPLIEDRSFLSWLVKFPSEQ 233
Query: 273 NELR 276
+LR
Sbjct: 234 EQLR 237
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 105/269 (39%), Gaps = 70/269 (26%)
Query: 801 LSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGAGPGIVPNDI 860
L K+ LL E + LVEGPLNNLK+SM+QF KPKK+ N A PG + +
Sbjct: 581 LLKKAAEKELLEAADEQKVLVEGPLNNLKESMIQFAKPKKLVN------AANPG--SHFM 632
Query: 861 STSNPNA----------DRRGSRARGYMPPGPPNGTHKPGLHPAGFPMPRVPLPPFQGGP 910
STS +A DR G++ G H P + VPL F
Sbjct: 633 STSMYDAREALIPGSVYDRSGTQVNG-------TQNHNP------YYQRNVPLDIFSRTH 679
Query: 911 PSQPYAIPSRGAVHG-----PVGA---VHHVPP----------------PGSRGFGA-GR 945
+ Y P R PVG + HVPP RG A R
Sbjct: 680 DTISYISPERAQAAMNNMPVPVGMFMNMAHVPPRFYNQHQQALQARQNQRNRRGVTASAR 739
Query: 946 GSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGP 1005
+G +G Q +QNT QP G +Q + G ++QPGF + P
Sbjct: 740 NKSGPRMGKLSQTEQNT-QPYSQPGLPL---------TQGTTQG-MSQPGFSLSQPGLSQ 788
Query: 1006 SQTFRDGFSVG---SMSQDFLGDDFKSQG 1031
++ +D F+VG S L D QG
Sbjct: 789 AELSQDSFAVGEFQSQMDGLLSQDSTYQG 817
>gi|414590340|tpg|DAA40911.1| TPA: hypothetical protein ZEAMMB73_425956 [Zea mays]
Length = 395
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/271 (68%), Positives = 212/271 (78%), Gaps = 7/271 (2%)
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLK
Sbjct: 7 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLK 66
Query: 830 QSMVQFQKPKKIYNDRRLFFGAGPGIVPN---DISTSNPNADRRGSRAR---GYMPPGPP 883
QSMVQFQKPKKIYNDRRLF G G G++ S+ AD+R R + + P GPP
Sbjct: 67 QSMVQFQKPKKIYNDRRLFLGGGQGVMHGTNFGAGASSQAADKRSGRGKEGQSFAPYGPP 126
Query: 884 NGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGA 943
NG HKPG+HP G+ +PR+P PPF G P SQPYAIP+RG +HGP+GAV V PGSR FG+
Sbjct: 127 NGVHKPGVHPVGYAVPRMPFPPFPGAPHSQPYAIPTRG-LHGPLGAVPPVHQPGSRNFGS 185
Query: 944 GRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQ 1003
R + G PIG HL HQQN+QQ +G+IGS FN+ +EN +SQPS G ++Q G + +PVQ
Sbjct: 186 ARSNTGGPIGGHLAHQQNSQQAMGSIGSNFNYTGMENPSSQPSGGAQMSQTGLMTQVPVQ 245
Query: 1004 GPSQTFRDGFSVGSMSQDFLGDDFKSQGSHV 1034
G SQTFRDGFS+G MSQDF DDFKSQGSHV
Sbjct: 246 GLSQTFRDGFSIGGMSQDFFVDDFKSQGSHV 276
>gi|300175280|emb|CBK20591.2| unnamed protein product [Blastocystis hominis]
Length = 861
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/511 (42%), Positives = 301/511 (58%), Gaps = 14/511 (2%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR--- 382
N + V TS R A+K DE ++S +IY+ LG++ + + R
Sbjct: 358 NGYYDVRLQEAGTSAARRLTAIKLLD-DEKAISQHIYNIFLGNKSMMNKREFYVSHRDRE 416
Query: 383 --FGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC 440
F AP L LN SQ A+ LQ +LIQGPPGTGKT + + G VLVC
Sbjct: 417 VSFDAPNLRPLNRSQHDAIAYALQSEFTLIQGPPGTGKTAYRNDPKHLWRFKTPGPVLVC 476
Query: 441 APSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQ 500
PSNVA D++ +I TG+ VVRL A S+E++ SPV+ L +H + R L +E SEL +Q
Sbjct: 477 TPSNVAADEICARIHRTGVNVVRLMAVSKESMESPVQELCVHIKARELMKAEASELLAIQ 536
Query: 501 QLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDES 560
D+ E+ +D + + +R + QSADV+ TC AG P L+ F VL+DE+
Sbjct: 537 TRHDDGEEIEEADWRHFMKESGKYKRRVIQSADVVVSTCDSAGSPLLSGCVFNSVLVDEA 596
Query: 561 TQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRL 620
+QATE E LIP+V GA +VVLVGD QL PV++ RAG SLFERL+ G++P L
Sbjct: 597 SQATECETLIPIVHGAHRVVLVGDQKQLQPVVLSAVCKRAGYDVSLFERLIDSGMEPQLL 656
Query: 621 QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEIS 680
VQYRMHP+LS F ++ FYEG L++G I E I F +P P+ F+ G+E I
Sbjct: 657 CVQYRMHPALSVFSNHKFYEGRLEDG--IGEANRPLIKFCYPNTKVPLLFWNVKGRESIG 714
Query: 681 ASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLY 740
+G+S+LN EA V IV ++ G+ +IGVIT Y GQ+ + N L+Q
Sbjct: 715 NTGSSFLNVQEATAVVNIVKELMQCGIKEKKIGVITSYTGQKVLLKN------LLQQSRL 768
Query: 741 KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKV 800
++E ASV++FQGRE DYI+LSCVRSN + IGFL DP+RLNVALTRAR+G++I+G+ V
Sbjct: 769 GKVECASVNTFQGREMDYIVLSCVRSNPMRIIGFLKDPKRLNVALTRARFGMIIVGDTSV 828
Query: 801 LSKQPLWNGLLTHYKEHECLVEGPLNNLKQS 831
L LW L++++ LV+G + + + S
Sbjct: 829 LKYNDLWKEYLSYHQALNTLVDGSIGHWQVS 859
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C YC + +V C + C++WFCNS GSHI H+ +H + HK+S L +
Sbjct: 23 CDYCKNRTGSSLVFCRI--CKRWFCNSTDVRQGSHIFLHMSYTRHYQALSHKESVLKGSR 80
Query: 205 LECYNCGCRNVFLLGFISAKTESVVVLLCREPCLN 239
+C +CG N+F L + V + C CL+
Sbjct: 81 FKC-SCGNSNIFDLYY--RMVNGAVKIRCLPSCLS 112
>gi|154419279|ref|XP_001582656.1| possible regulator of nonsense transcripts [Trichomonas vaginalis
G3]
gi|121916893|gb|EAY21670.1| possible regulator of nonsense transcripts, putative [Trichomonas
vaginalis G3]
Length = 619
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 215/561 (38%), Positives = 305/561 (54%), Gaps = 43/561 (7%)
Query: 298 SVGHVIKLTAQ------EEVALELRASQGVPVDINHGFSVDF-----------VWKSTSF 340
S+G +KL E A ++ ++ + ++I G F V+ S +
Sbjct: 47 SLGSTVKLIQNLDGNEVTETAKVVQRNKNMTIEIKFGIPSTFFETPNPLTIMNVFNSLVY 106
Query: 341 DRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPEL--------N 392
DR + A+ F + + +I +LG Q VRN + + P +PEL N
Sbjct: 107 DRQKAALAAFDTERKPMDNFIAECILGKPDNFQ-VRNKI--KDSHPVIPELPPAYFKKLN 163
Query: 393 ASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAE 452
SQ A+K +L +L+QGPPGTGKT T AA+ K G VLVCA SNVA D
Sbjct: 164 PSQETAIKFILSHRFTLLQGPPGTGKTTTIAALALSFVKNGISPVLVCAQSNVATDFATL 223
Query: 453 KISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+++ TG+KV R+ + +RE V+ V+ T R T E KL+ KDE
Sbjct: 224 RVAQTGVKVARVLSSNREEVAGDVDRYTTKNLAR---TMFGEEFTKLENDKDEASR---- 276
Query: 513 DEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL 572
K++ R + QS +V+C TCV AG RL +F+ V+ DES Q +P+ LIPL
Sbjct: 277 -----KSITRMDSDVVRQS-EVVCTTCVSAGGARLGRIKFQAVIFDESGQCLDPDLLIPL 330
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
V G +Q VLVGDH QLGPV++ ++A +A L +RL+L G+ P+ L+ QYRMHP LS
Sbjct: 331 VHGTRQCVLVGDHKQLGPVVVSRQAVKARYDIPLMQRLILNGIHPLVLRTQYRMHPGLSA 390
Query: 633 FPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEA 692
FPS +FY G LQ+GVT R WP P P+ F+ +EE SG SY+NR E
Sbjct: 391 FPSEAFYSGMLQDGVTAEHRTWPNQFMKWPNPKLPLIFWNIPSKEEFYESGLSYVNRHEV 450
Query: 693 ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGA--LRQQLYKEIEVASVDS 750
V ++ GV S IGVITPY GQ+ Y++ + A + + EIE+ASVD+
Sbjct: 451 GAVAVLLEAMYLGGVKASDIGVITPYAGQQIYMIETLPALCAKITDKSFFDEIEIASVDA 510
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
FQGREK++IILS VR+N+ +GF+ D RL V+LTRARYG+++LG S+ +W
Sbjct: 511 FQGREKNFIILSNVRANDQHDLGFVKDLHRLCVSLTRARYGLIVLGCADTFSENKVWCKY 570
Query: 811 LTHYKEHECLVEGPLNNLKQS 831
+ H +E+ V+G +N+ K S
Sbjct: 571 IKHCQENRVFVDGSINDFKPS 591
>gi|343415926|emb|CCD20512.1| hypothetical protein, conserved (fragment) [Trypanosoma vivax Y486]
Length = 794
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 271/445 (60%), Gaps = 5/445 (1%)
Query: 387 GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVA 446
G LN SQ AVK+ L +LIQGPPGTGKT TS I+ + + + +VLVCAPSN A
Sbjct: 342 GFKGLNESQQAAVKAALSNAFTLIQGPPGTGKTSTSVQIIRQLLLRKKTRVLVCAPSNAA 401
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKD-- 504
VD L+E + + +R+ + RE S + TL +VR + + K +K
Sbjct: 402 VDHLSESMYKNKIDFIRVQPRYREENDSGRPY-TLGSRVREIMEAMPLNRKKRDIVKRAL 460
Query: 505 EQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT 564
E G LS +++ + L+ ++I V+ CTC+GAG L F+ VLIDE++QAT
Sbjct: 461 ESGRLSEEEKQLCQKLEDRAVKKILAETRVVACTCIGAGSRWLRGFKADFVLIDEASQAT 520
Query: 565 EPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQY 624
EPE L+PL G KQV LVGDH QLGPV++ A + G A+SLFERL G + +L +QY
Sbjct: 521 EPETLVPLFRGEKQVALVGDHRQLGPVVLSNVAGKKGFARSLFERLAGAGSEITQLNLQY 580
Query: 625 RMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGT 684
R HP + F S +FY GT+ +GV +R +SGI FPWP P +PM FY G EE+ SG
Sbjct: 581 RTHPFIYRFSSMAFYGGTVLDGVPAEKRDASGI-FPWPNPEKPMLFYDCSGVEEVGDSGA 639
Query: 685 SYLNRTEAANVEKIVTTFLRSGVV-PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S+LN EA +V L SG V P ++G+I+PY Q Y+ + + G + +Y+++
Sbjct: 640 SFLNEAEARATISVVDAVLESGAVRPDEVGIISPYRAQCEYMRERLLQWGTAGKDIYEKV 699
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
E+++VD++QGREK+ IILSCVR+NE + +GF+ D RRLNV+LTRAR G++ +G + L
Sbjct: 700 EISTVDAYQGREKEIIILSCVRNNEERTVGFIGDERRLNVSLTRARRGLIAIGKAEALRG 759
Query: 804 QPLWNGLLTHYKEHECLVEGPLNNL 828
W+ LL + EH V GP+ +L
Sbjct: 760 DKCWSKLLLYMGEHSLAVTGPIRSL 784
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 144 ACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGET 203
+C YC SN ++RC+ +C KWFCN +HI+ H + H P+
Sbjct: 11 SCAYCAESNFETLLRCD--TCDKWFCNGARAKGRAHILYHAAINRSHPFSTHPSCPITGM 68
Query: 204 ILECYNCGCRNVFLLGFISAKTESVVVLLCR 234
LEC C NVF L F + + +L+CR
Sbjct: 69 RLECAACESTNVFALRFFPGTSGARNLLICR 99
>gi|328852290|gb|EGG01437.1| hypothetical protein MELLADRAFT_79029 [Melampsora larici-populina
98AG31]
Length = 594
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/277 (66%), Positives = 224/277 (80%), Gaps = 7/277 (2%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYSGDAAHPAWQSV 299
+KES ++++VT+RWD+GLN+KR+AYF PK E E+RL GDELRLRY+G+ P W+ +
Sbjct: 321 LKESLTQNDVTVRWDMGLNQKRIAYFYLPKLESGEVRLAVGDELRLRYAGELQRP-WEGL 379
Query: 300 GHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
GHVIK+ + +EVALELR + GVP ++ FSVDFVWKSTSFDRMQ AMKTFAVDE SV
Sbjct: 380 GHVIKVPNSQSDEVALELRRNDGVPHELTVNFSVDFVWKSTSFDRMQLAMKTFAVDEQSV 439
Query: 358 SGYIYHHLLGHEVEV-QMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
SGYIYH L+GH+ ++ Q++R +P+R AP LPELN SQV AVKSVLQ+P+SLIQGPPGT
Sbjct: 440 SGYIYHKLMGHDAQIPQVLRTQMPKRVSAPNLPELNHSQVNAVKSVLQKPLSLIQGPPGT 499
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKTVTSA+IVYH++K GQVLVCAPSNVAVDQL+EKI TGLKVVR+ AKSREA+ S V
Sbjct: 500 GKTVTSASIVYHLSKMNPGQVLVCAPSNVAVDQLSEKIHMTGLKVVRVQAKSREALDSSV 559
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSD 513
++LTLH QV + DT +L KL QLK EQGELSS+D
Sbjct: 560 QYLTLHLQVANNDT--HPDLQKLIQLKSEQGELSSTD 594
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 80/99 (80%), Gaps = 6/99 (6%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRG----NTSGSHIVNHLVRAKHKEVCLHKDS 198
HAC YCG+ +P+ VVRC + C KWFCNSRG +++GSHIVNHLVR+KHKEV LH D
Sbjct: 115 HACAYCGIHSPSSVVRCLI--CSKWFCNSRGGPGTHSTGSHIVNHLVRSKHKEVTLHADG 172
Query: 199 PLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
PLGET ECYNCG +NVF LGFI AK+++VVVLLCR+PC
Sbjct: 173 PLGETTPECYNCGSKNVFTLGFIPAKSDTVVVLLCRQPC 211
>gi|389748586|gb|EIM89763.1| hypothetical protein STEHIDRAFT_118879 [Stereum hirsutum FP-91666
SS1]
Length = 388
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 162/203 (79%), Positives = 182/203 (89%)
Query: 638 FYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEK 697
FYEGTLQNGVT ER +DFPWPVP+ PMFFY +GQEEIS+SGTS+LNRTEA+NVEK
Sbjct: 2 FYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRTEASNVEK 61
Query: 698 IVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKD 757
IVT F +SGVVP QIGV+TPYEGQR+YIVNYM NG+L++ LYKEIEVASVD+FQGREKD
Sbjct: 62 IVTKFFKSGVVPGQIGVVTPYEGQRSYIVNYMQYNGSLKKDLYKEIEVASVDAFQGREKD 121
Query: 758 YIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
YIILSCVRSNEHQGIGFLNDPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LLTHYKE
Sbjct: 122 YIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEK 181
Query: 818 ECLVEGPLNNLKQSMVQFQKPKK 840
CLVEGPLNNL+ SM+QF KP++
Sbjct: 182 GCLVEGPLNNLQPSMIQFSKPRR 204
>gi|238600751|ref|XP_002395227.1| hypothetical protein MPER_04754 [Moniliophthora perniciosa FA553]
gi|215465596|gb|EEB96157.1| hypothetical protein MPER_04754 [Moniliophthora perniciosa FA553]
Length = 311
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 634 PSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAA 693
PSN YEG+LQNGVT ER +DFPWPVP+ PMFFY +GQEEIS+SGTS+LNRTEA+
Sbjct: 1 PSN-IYEGSLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRTEAS 59
Query: 694 NVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQG 753
NVEKIVT F +SGVVP+QIGV+TPYEGQR+YIVNYM NG+L++ LYKE+EVASVD+FQG
Sbjct: 60 NVEKIVTKFFKSGVVPNQIGVVTPYEGQRSYIVNYMQFNGSLKKDLYKEVEVASVDAFQG 119
Query: 754 REKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
REKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA+YG+VILGNPKVLSK PLW+ LLTH
Sbjct: 120 REKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHDLLTH 179
Query: 814 YKEHECLVEGPLNNLKQSMVQFQKPKK 840
YK ECLVEGPL+NL+ SM+QF KPK+
Sbjct: 180 YKSKECLVEGPLSNLQVSMIQFSKPKR 206
>gi|123478695|ref|XP_001322509.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121905356|gb|EAY10286.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 803
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 294/518 (56%), Gaps = 19/518 (3%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH--------EVEVQMVRN 377
+ G ++ ++ + SF+R A+ F D+ I +LG+ V+ Q V
Sbjct: 266 DFGITLTVIYGAISFERQLKALDIFEKDKKCCHYIIRDAILGNIKNFKDHNRVKGQNVEM 325
Query: 378 TLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQV 437
LP P LN SQ A K+ L++ +LIQGPPGTGKT AAIV K G V
Sbjct: 326 VLP---SGNDFPILNESQQKATKTALKQRFTLIQGPPGTGKTTVIAAIVASFVKAGVTPV 382
Query: 438 LVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAV-SSPVEHLTL-HYQVRHLDTSEKSE 495
LV SN+A D +IS TG+ V+R+ A ++E + + T+ + +R TS
Sbjct: 383 LVLTQSNIAADFATRRISQTGVNVIRVLAFNKETNPNDDTNYETIPDFDIRPF-TSHAKA 441
Query: 496 LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
+ + ++ +G SSD+ + R E++I + V+C TC AG R+ + +F V
Sbjct: 442 VERYGEVF--EGLCQSSDQND-RTQARNLEKDIIREYPVVCTTCGSAGGSRITSMKFPVV 498
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL 615
+ DES Q +P+ +I GA+Q++LVGDH QLGPV++ KKA ++ SL +RL L +
Sbjct: 499 IFDESGQVLDPDIVIGATRGAQQMILVGDHRQLGPVVLSKKAIKSRYDVSLMKRLTALNV 558
Query: 616 KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMG 675
+P L +QYRMHPS+S FPS +FY +++G++ ++R+ PWP P+ F+
Sbjct: 559 RPSVLTMQYRMHPSISSFPSEAFYMKLVKDGLSASDRKWPRPILPWPDKESPVMFWNVDS 618
Query: 676 QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIVNYM-SRNG 733
+EE S SY+N EA + +IV R+GV IG+ITPY GQ+ Y+++ + S
Sbjct: 619 REENYDSAISYVNVKEAEAISQIVDMMCRNGVKSGDDIGIITPYTGQQMYLMDSLPSLCK 678
Query: 734 ALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV 793
+ +EIE+ASVD+FQGREK++II SCVR+N+ IGF+ D RRL V+LTRA+YG+V
Sbjct: 679 YANDDIIQEIEIASVDAFQGREKNFIIFSCVRANDMNDIGFMRDQRRLCVSLTRAKYGLV 738
Query: 794 ILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQS 831
I+GN ++ +W L+ + VEG L+ LK+S
Sbjct: 739 IVGNAATFARSSIWCKLIQNLMNRGLFVEGELSALKKS 776
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 140 FTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSP 199
T C YCG S C+ VP C +FCN +G SHI + L + L ++
Sbjct: 1 MTLRKCAYCGCSEAECLAE--VPECGLYFCNGKGVIPQSHITHFLKQTNLSSFTLPPENR 58
Query: 200 LGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
+ ECY C NVF LGF+ +S V + CR+PC
Sbjct: 59 FHQVKFECYVCHSTNVFQLGFVRFPHDSSVYITCRQPC 96
>gi|313231475|emb|CBY08589.1| unnamed protein product [Oikopleura dioica]
Length = 1109
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/295 (58%), Positives = 224/295 (75%), Gaps = 17/295 (5%)
Query: 231 LLCREPCLNM-MKESQSKDNVT-IRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYS 288
L+ RE + KESQ+++ +T +RWD LNK++VAY PK D+E+RL+ GDE+RLR
Sbjct: 295 LILREADYDKKTKESQTQNAITNVRWDTALNKRKVAYMNLPKTDSEMRLMCGDEVRLRLP 354
Query: 289 GDAAHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDI---NHGFSVDFVWKSTSFDRM 343
+ W+S GHV+K+ +E+ALELR++ VP I + GFS++F+WKSTSFDRM
Sbjct: 355 SEN----WESTGHVVKVPDNFGDEIALELRSN--VPAGILETSRGFSLEFIWKSTSFDRM 408
Query: 344 QGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRN-TLPRRFGAPGLPELNASQVFAVKSV 402
Q A+K FAVDE+SVSGY+YH LLG+++E Q ++ +LPRRF APGLP+LN SQ +AVK+V
Sbjct: 409 QAALKAFAVDESSVSGYLYHKLLGNDIEEQNLKIPSLPRRFSAPGLPDLNHSQAYAVKTV 468
Query: 403 LQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ-GQVLVCAPSNVAVDQLAEKISATGLKV 461
LQ+P+SLIQGPPGTGKTVTSA +VYH+ K + GQVLVCAPSN+AVDQL EKI TGLKV
Sbjct: 469 LQKPLSLIQGPPGTGKTVTSATLVYHLVKSTEMGQVLVCAPSNIAVDQLTEKIHKTGLKV 528
Query: 462 VRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKK 516
VRLCAKSRE V S V L+LH QV+ L+ E+ EL KL +LK E GEL+ +DEK+
Sbjct: 529 VRLCAKSRENVDSTVGSLSLHNQVKSLN--EQRELRKLCELKSEMGELAPNDEKR 581
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 85/117 (72%), Gaps = 8/117 (6%)
Query: 139 DFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDS 198
D EHAC YCG+ +P VVRC + +KWFCN RG TSGSHI+NHLVRAK KEV LHK
Sbjct: 102 DLPEHACAYCGIHDPMYVVRCQL--TKKWFCNGRGTTSGSHIINHLVRAKCKEVSLHKGG 159
Query: 199 PLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKESQSKDNVTIRWD 255
LG+T+LEC++CGCRN+FLLG+I AK +SVVVLLCR PC K+ + K WD
Sbjct: 160 QLGDTVLECFSCGCRNIFLLGYIPAKGDSVVVLLCRTPCAAQAKKEKDK------WD 210
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 16/134 (11%)
Query: 786 TRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYN-- 843
TRARYG++I+GNPK LS+ +WN LLT++K++ LVEGPLN+L++S +QF KP+ N
Sbjct: 870 TRARYGVIIVGNPKALSRHSMWNNLLTYFKDNHTLVEGPLNDLRESAIQFVKPRTDKNLG 929
Query: 844 -----DRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHPA-GFP 897
+ + A +VP DR+ + R Y P G +H G P G P
Sbjct: 930 QQGRWAQTATWDAKEALVPGGA------YDRQRNAPRTYDPMGRI--SHHTGSLPGVGVP 981
Query: 898 MPRVPLPPFQGGPP 911
M V + PP
Sbjct: 982 MSMVMNSQYGSRPP 995
>gi|374723515|gb|EHR75595.1| putative DNA helicase [uncultured marine group II euryarchaeote]
Length = 662
Score = 312 bits (799), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 202/516 (39%), Positives = 280/516 (54%), Gaps = 22/516 (4%)
Query: 322 PVDINHG-FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLG--HEVEVQMVRNT 378
P DI G + +D + DRM A+ TF E + LLG H++ R
Sbjct: 137 PKDIRKGTWRLDRGANRVAHDRMHEALSTFHSSEGEGGTVLRDLLLGSLHDMSTSAARPP 196
Query: 379 LPR---RFGAPGLPE--LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQG 433
R + G GL LN SQ AV+S L+R ++LIQGPPGTGKT T+ ++ + G
Sbjct: 197 EIRGQKQRGPVGLAAMTLNPSQRAAVESALERRLTLIQGPPGTGKTHTAVHLLSALVNIG 256
Query: 434 QGQVLVCAPSNVAVDQLAEKISATGLKVVRLC--AKSRE-----AVSSPVEHLTLHYQVR 486
+G +L A SNVAVD L E + G+K VR+ K RE + + +E L ++R
Sbjct: 257 RGPILATAESNVAVDNLLEGLLELGVKAVRIGRPVKVREHLRQATLDAQIERHPLQEELR 316
Query: 487 HLDTSEKSELHKLQQLKDEQGELSSSD-EKKYKALKRATEREIS---QSADVICCTCVGA 542
+ L LK ++ ++ D + +K ++ I+ A+VIC T +G
Sbjct: 317 FVREQNDELRRSLSGLKGKEKGMAHKDVNRNFKEMRSIEANMIASVLDGAEVICATTIGV 376
Query: 543 GDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
G L + RF VL+DE+TQA+EP L+P+ G +Q+VLVGDH QL P ++ + A + GL
Sbjct: 377 GHKLLRDRRFPVVLMDEATQASEPSALVPITRGCRQLVLVGDHKQLPPTVISEAAQQGGL 436
Query: 603 AQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
QSLFERL GL L QYRMHP++ E+PS FYE L +G T +R + F WP
Sbjct: 437 GQSLFERLTECGLDTHMLTTQYRMHPTIREYPSARFYEDRLDDGCTPADRPPAA-GFLWP 495
Query: 663 VPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQ 721
+ P+ F G E + G+S N EAA V IV L +G + P+ IGVITPY GQ
Sbjct: 496 DWDHPVAFVPIDGSEIVDEEGSSKSNLDEAAKVLSIVNGLLSAGDLTPADIGVITPYSGQ 555
Query: 722 RAYIVNYMSRNGALRQQL-YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
+V+ + G + Y +E+ SVD +QGREK+ I+ S VR+NEH IGFL D RR
Sbjct: 556 VRLLVDLFEQAGGREEGAPYAGLEIKSVDGYQGREKEIIVFSAVRANEHGEIGFLRDRRR 615
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
LNVA+TRAR G+++LGN K L W L +E
Sbjct: 616 LNVAITRARRGLIVLGNTKTLRHDGTWRAWLDWAEE 651
>gi|193785930|dbj|BAG54717.1| unnamed protein product [Homo sapiens]
Length = 373
Score = 301 bits (770), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/376 (46%), Positives = 230/376 (61%), Gaps = 44/376 (11%)
Query: 668 MFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVN 727
MFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPYEGQR+Y+V
Sbjct: 1 MFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQ 60
Query: 728 YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTR 787
YM +G+L +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDPRRLNVALTR
Sbjct: 61 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 120
Query: 788 ARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYND--- 844
ARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP+K+ N
Sbjct: 121 ARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINP 180
Query: 845 -----RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHPAGFPMP 899
+ A I+P + + +G + Y G G P+
Sbjct: 181 GARFMTTAMYDAREAIIPGSVY----DRSSQGRPSSMYFQTHDQIGMISAG--PSHVAAM 234
Query: 900 RVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRGSAGAPIGSH 955
+P+P PP +PPPG + G AGRG+ G
Sbjct: 235 NIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRGTPKGKTGRG 273
Query: 956 LQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSV 1015
+ + P + + N + ++ SQP G LTQ G+++ + PSQ + G S
Sbjct: 274 GRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPSQMSQPGLSQ 329
Query: 1016 GSMSQD-FLGDDFKSQ 1030
+SQD +LGD+FKSQ
Sbjct: 330 PELSQDSYLGDEFKSQ 345
>gi|67971434|dbj|BAE02059.1| unnamed protein product [Macaca fascicularis]
Length = 373
Score = 299 bits (766), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 175/376 (46%), Positives = 230/376 (61%), Gaps = 44/376 (11%)
Query: 668 MFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVN 727
MFFYV GQEEI++SGTSYLNRTEAANVEKI T L++G P QIG+ITPYEGQR+Y+V
Sbjct: 1 MFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQ 60
Query: 728 YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTR 787
YM +G+L +LY+E+++ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDPRRLNVALTR
Sbjct: 61 YMQFSGSLHTKLYQEVKIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 120
Query: 788 ARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYND--- 844
ARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP+K+ N
Sbjct: 121 ARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINP 180
Query: 845 -----RRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHPAGFPMP 899
+ A I+P + + +G + Y G G P+
Sbjct: 181 GARFMTTAMYDAREAIIPGSVC----DRSSQGRPSSMYFQTHDQIGMISAG--PSHVAAM 234
Query: 900 RVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPG----SRGFGAGRGSAGAPIGSH 955
+P+P PP +PPPG + G AGRG+ G
Sbjct: 235 NIPIPFNLVMPP---------------------MPPPGYFGQANGPAAGRGTPKGKTGRG 273
Query: 956 LQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPSQTFRDGFSV 1015
+ + P + + N + ++ SQP G LTQ G+++ + PSQ + G S
Sbjct: 274 GRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQ-GYIS---MSQPSQMSQPGLSQ 329
Query: 1016 GSMSQD-FLGDDFKSQ 1030
+SQD +LGD+FKSQ
Sbjct: 330 PELSQDSYLGDEFKSQ 345
>gi|146163349|ref|XP_001011272.2| hypothetical protein TTHERM_00146330 [Tetrahymena thermophila]
gi|146146126|gb|EAR91027.2| hypothetical protein TTHERM_00146330 [Tetrahymena thermophila SB210]
Length = 1186
Score = 295 bits (755), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 191/564 (33%), Positives = 305/564 (54%), Gaps = 48/564 (8%)
Query: 277 LVPGDELRLRYSGDAAHPAWQSVG-HVIKLTAQEEVALELRASQGVPVDINHGFSVDFVW 335
L G EL++++ + +S+ H I + Q+ R G V+ + +
Sbjct: 637 LKQGKELKIKWGNFKSKFYVESIDDHKIVIKIQDSNKSLSRFKVGNVVE---NVQIKLIN 693
Query: 336 KSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRN-TLPRRFGAPGLPELNAS 394
F+R+ + F+ E S+ I + ++ + + + +LN S
Sbjct: 694 PKQIFERILQGINKFSSLEESLQKKILGQFEKDDKSIKSDDSLEIIDEQAQQDIAQLNQS 753
Query: 395 QVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV----YHMAKQGQGQ-VLVCAPSNVAVDQ 449
Q+ A++S L + ISLIQGPPGTGKT T+A +V Y + K Q + +LVCAPSN+A D
Sbjct: 754 QLQAIQSSLSKNISLIQGPPGTGKTETAAQLVLEIWYKINKNQQNEKILVCAPSNLAADN 813
Query: 450 LAEKISATG--LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQG 507
++++I A +KV+R+ +++R+ V + YQ + + LHK+ LK E G
Sbjct: 814 ISDRIHAQNREIKVIRIVSQARQRVK-------VSYQFQDI------VLHKV--LKKE-G 857
Query: 508 ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPE 567
+ K LKRA +++ ++ADVIC TC+ + D + F V+IDE+ QA EPE
Sbjct: 858 FFN-----KNSVLKRA--KQLIENADVICTTCINSVDKFIKGISFSTVVIDEANQAIEPE 910
Query: 568 CLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMH 627
+IPL AK+++L+GDH QL P+I+ +A++ GL +SLF RLV GL P L +QYRMH
Sbjct: 911 TIIPLQHQAKKLILIGDHKQLPPIILSIQASKDGLKRSLFSRLVQAGLIPQFLSIQYRMH 970
Query: 628 PSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 687
P + + S+ FY+ L++GV +R + F W P+ FY GQE G S++
Sbjct: 971 PEIRKLASSIFYQNQLKDGVNEQDRTPTP-KFNWLNNKIPIQFYDVQGQEITLQDGKSFI 1029
Query: 688 NRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS 747
N EA V+ +V+ +++GV + IG+ITPY Q YI + + L Y
Sbjct: 1030 NEEEAKLVKSLVSQLIQAGVKDNDIGIITPYLSQSNYISQLIKNSNILIDTTY------- 1082
Query: 748 VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 807
SFQG+E+DYII+SCVR N Q +G L P+ +NV++TRA+ G++I+GN K +S W
Sbjct: 1083 --SFQGQERDYIIISCVRINNFQNLGILRTPQLINVSITRAKRGLLIVGNKKHVSYSRWW 1140
Query: 808 NGLLTHYKEHECLVE---GPLNNL 828
++ + + + + E P+ N+
Sbjct: 1141 KQIIDYLDKLKLIQEIKKEPIENI 1164
>gi|440789574|gb|ELR10880.1| putative DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 1656
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 262/464 (56%), Gaps = 21/464 (4%)
Query: 369 EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTS---AAI 425
E+ + R P+ F A +LN SQ + ++L R ++L+QGPPGTGKT + +
Sbjct: 310 ELADRYARKNFPKNFDAW---KLNESQRKVITTILTRKLTLVQGPPGTGKTTLAIHLMKL 366
Query: 426 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLC--AKSREAVSS-PVEHLTLH 482
+ H+ + G +L A +NVAVD L E ++ +G++ VR+ K RE + +E L
Sbjct: 367 LVHLCR-GHAPILCTADTNVAVDNLLEGLADSGVRAVRVGRPVKIREELRDLSLEALMQE 425
Query: 483 YQVRHLDTSEKSELHKLQQLKDEQGELSSSDE-----KKYKALKRATEREISQSADVICC 537
+ + + + EL L K + ++ E + + L+ ++ ADVIC
Sbjct: 426 HAANNKLDALRQELAGLSHGKTPEERAAAKREGVTLHQNIRRLEDYIHNDVLGKADVICA 485
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TC+GAG LA+ F V++DESTQATEP L LV ++ VVL+GDH QL P + +A
Sbjct: 486 TCIGAGHDLLASRAFPIVILDESTQATEPASLCALVHNSQHVVLLGDHYQLPPTVTSPEA 545
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS-SG 656
+ GL++SLF R++ +G++P L++QYRMHP +SEFPS FY G +++G+ +R S +G
Sbjct: 546 QQGGLSESLFARMIAMGIEPYMLEIQYRMHPIISEFPSVHFYGGKIKDGIVAAQRPSPTG 605
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS--QIGV 714
I WP P+ F G E+ S G S+ N E V ++V+ F + V IGV
Sbjct: 606 I--AWPSEGNPIAFVNVDGYEKQSTDGYSWFNSAEGEAVFQLVSAFDQRSDVGDVKDIGV 663
Query: 715 ITPYEGQRAYIVNYMSRNGAL-RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY GQ ++ + SR G + + + + ++ + SVD +QGREK+ II + VRSN +G
Sbjct: 664 ITPYNGQVKHLADLFSRRGGMNKNEKWHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVG 723
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
FL D RRLNVALTRAR G++++GN + L W L H
Sbjct: 724 FLRDWRRLNVALTRARRGLLVVGNRRTLQSDEHWGKWLRWIDTH 767
>gi|440794946|gb|ELR16091.1| hypothetical protein ACA1_224920 [Acanthamoeba castellanii str.
Neff]
Length = 1615
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 262/464 (56%), Gaps = 21/464 (4%)
Query: 369 EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTS---AAI 425
E+ + R P+ F A +LN SQ + ++L R ++L+QGPPGTGKT + +
Sbjct: 309 ELADRYARKNFPKNFDAW---KLNESQRKVITTILTRKLTLVQGPPGTGKTTLAIHLMKL 365
Query: 426 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLC--AKSREAVSS-PVEHLTLH 482
+ H+ + G +L A +NVAVD L E ++ +G++ VR+ K RE + +E L
Sbjct: 366 LVHLCR-GHAPILCTADTNVAVDNLLEGLADSGVRAVRVGRPVKIREELRDLSLEALMQE 424
Query: 483 YQVRHLDTSEKSELHKLQQLKDEQGELSSSDE-----KKYKALKRATEREISQSADVICC 537
+ + + + EL L K + ++ E + + L+ ++ ADVIC
Sbjct: 425 HAANNKLDALRQELAGLSHGKTPEERAAAKREGVTLHQNIRRLEDYIHNDVLGKADVICA 484
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
TC+GAG LA+ F V++DESTQATEP L LV ++ VVL+GDH QL P + +A
Sbjct: 485 TCIGAGHDLLASRAFPIVILDESTQATEPASLCALVHNSQHVVLLGDHYQLPPTVTSPEA 544
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS-SG 656
+ GL++SLF R++ +G++P L++QYRMHP +SEFPS FY G +++G+ +R S +G
Sbjct: 545 QQGGLSESLFARMIAMGIEPYMLEIQYRMHPIISEFPSVHFYGGKIKDGIVAAQRPSPTG 604
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS--QIGV 714
I WP P+ F G E+ S G S+ N E V ++V+ F + V IGV
Sbjct: 605 I--AWPSEGNPIAFVNVDGYEKQSTDGYSWFNSAEGEAVFQLVSAFDQRSDVGDVKDIGV 662
Query: 715 ITPYEGQRAYIVNYMSRNGAL-RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY GQ ++ + SR G + + + + ++ + SVD +QGREK+ II + VRSN +G
Sbjct: 663 ITPYNGQVKHLADLFSRRGGMNKNEKWHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVG 722
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
FL D RRLNVALTRAR G++++GN + L W L H
Sbjct: 723 FLRDWRRLNVALTRARRGLLVVGNRRTLQSDEHWGKWLRWIDTH 766
>gi|344230553|gb|EGV62438.1| hypothetical protein CANTEDRAFT_115904 [Candida tenuis ATCC 10573]
Length = 305
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/226 (59%), Positives = 168/226 (74%), Gaps = 2/226 (0%)
Query: 612 LLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY 671
+LG P+RL+VQYRM+P+LSEFPSN FYEG+LQ+GVT+ +R FPWPV + P F+
Sbjct: 1 MLGHVPLRLEVQYRMNPALSEFPSNMFYEGSLQDGVTVEDRLIKNSTFPWPVQDIPSMFW 60
Query: 672 VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSR 731
G+EEIS SG+S+LNR EA VEK+V GV QIG+ITPYEGQ++++ Y++
Sbjct: 61 ANYGKEEISGSGSSFLNRVEAMRVEKVVNRLFEDGVKGDQIGIITPYEGQQSFVTRYLAT 120
Query: 732 NGALRQ--QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 789
N Q Y IEVASVD+FQGREKD+IILSCVR+NE Q IGFL DPRRLNVALTRA+
Sbjct: 121 NATQTQYKDEYLSIEVASVDAFQGREKDFIILSCVRANEAQVIGFLRDPRRLNVALTRAK 180
Query: 790 YGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
YG+++LGNP+ LS+ PLWN LL HY+E CLVEG L NL+ V+
Sbjct: 181 YGMIVLGNPRTLSRNPLWNHLLVHYRERGCLVEGLLENLQMCTVKL 226
>gi|452820756|gb|EME27794.1| endonuclease [Galdieria sulphuraria]
Length = 712
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 172/452 (38%), Positives = 252/452 (55%), Gaps = 27/452 (5%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
+ N SQ A K+ L+R ++LIQGPPGTGKT T A I+ + + G+ +L A +++A D
Sbjct: 264 DWNESQQTAWKNALERRLTLIQGPPGTGKTKTLAKILASLVQLGRTPILASAYTHIATDN 323
Query: 450 LAEKISATGLKVVRLCAKS---REAVSSPVEHLTLHYQVRHLDTSE--KSELHKLQQLKD 504
+ +++ + +R+ + R ++ L L R ++ E K + +L Q K
Sbjct: 324 ILDELERYNIPAIRIGKPANIHRNLWKYSLDSL-LERDTRIIEKRENLKKAMERLAQPKR 382
Query: 505 EQG-ELSSSDEKKYKALKRATE----REISQSADVICCTCVGAGDPRLANFRFRQVLIDE 559
+ L+ D K + TE +EI ++ TCVGAG+ L N F+ V IDE
Sbjct: 383 GKAIGLAHRDYSKSLGQLKQTEMIATKEILDKYPIVLSTCVGAGEEILKNISFQVVAIDE 442
Query: 560 STQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR 619
+TQ+ EP LIP++ G +Q++L GDH QL P I+ +AA +GL+ SLFERLV G++P
Sbjct: 443 ATQSHEPGLLIPIIKGCEQLILAGDHYQLPPTILNPEAAESGLSVSLFERLVRSGVEPYL 502
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEI 679
L+ QYRMHPS++ FPS FY G L + QS FPWP P P+ F +G+E +
Sbjct: 503 LRTQYRMHPSIAAFPSQYFYHGLLHSAPCT---QSISNYFPWPNPQTPIAFIPVLGEEWV 559
Query: 680 SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ-----------IGVITPYEGQRAYIVNY 728
+ GTSY N E+ V + ++ + + + IG+ITPY GQ I++
Sbjct: 560 TEQGTSYCNPQESQVVIETISQIVENWMTAQNSNHTLQQSFPTIGIITPYAGQMRDIMDR 619
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
M R + Y +EV +VD FQGREKD II+S VRSN Q +GFL D RRLNVA+TR+
Sbjct: 620 MDRETSTEWLSY--VEVKTVDGFQGREKDIIIISTVRSNPSQSLGFLQDWRRLNVAITRS 677
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 820
R G++++GN LS+ W L H C+
Sbjct: 678 RSGLIVIGNANTLSRNDHWKRWLEWISHHGCI 709
>gi|159114110|ref|XP_001707280.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
gi|112735207|gb|ABI20695.1| UPF1 [Giardia intestinalis]
gi|157435384|gb|EDO79606.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
Length = 1304
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/493 (38%), Positives = 260/493 (52%), Gaps = 68/493 (13%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAK------QGQGQ-------- 436
LN SQ ++ VL RPI+L+QGPPG GKT A + + +K G
Sbjct: 801 LNFSQKDVIQYVLSRPITLVQGPPGCGKTFIGACLAWLFSKVYGSLDHDSGSFRQATPVP 860
Query: 437 VLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS----SP---VEHLTLHYQVRHL- 488
VL+C PSN A + L + GL VVR+ + +R+ ++ SP + + LH +
Sbjct: 861 VLICCPSNTAAESLTLALEPFGLPVVRVVSLARQRLAEYEESPNTYADRVCLHVLFEEIL 920
Query: 489 ----------DTSEKSELHKL-QQLKDEQ-----GELSSSDEKKYK-----ALKRATERE 527
D + E + + + DE E+ + + K K ALK++ E E
Sbjct: 921 KLTLGDDAPSDFTPSKEARLIYENMLDEIPVKQFNEVYNYLQMKKKENIDVALKQSAEEE 980
Query: 528 ISQ-----------SADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA 576
IS+ SA V+ CTC + D L+ F +++DESTQA EP+ L + G
Sbjct: 981 ISKAMFEIENIIISSAKVVVCTCSTSYDNHLSRVHFSSLIVDESTQAIEPDTLCAIGHGC 1040
Query: 577 KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSN 636
+VL+GDH QLGP++ A + L SL+ERL G++P L VQYRMHP+LS FPSN
Sbjct: 1041 SHIVLMGDHKQLGPIVATNIARHSKLDLSLYERLQRAGIEPHSLTVQYRMHPALSAFPSN 1100
Query: 637 SFYEGTLQNGVTINERQSS----GID-FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTE 691
+FY G LQNGVT +RQ ID FPWP+P+ P FF+ G EI GTS N TE
Sbjct: 1101 TFYNGMLQNGVTQADRQLIPKPLSIDSFPWPIPSTPSFFWHVQGTHEI-GHGTSLRNDTE 1159
Query: 692 AANVEKIVTTFLRS-GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 750
VE IV L+ + S IG++TPY+ Q+ I + G Y E+ V SVD+
Sbjct: 1160 ILCVEAIVDQLLKCYELKQSDIGIVTPYDYQKCQIEMQLKDAG------YSEVFVNSVDA 1213
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
FQG EK+ II S VRS + + IGFL D RRLNV LTR R ++I+GN L+ W L
Sbjct: 1214 FQGHEKEVIIFSTVRSVD-KHIGFLKDQRRLNVGLTRCRCALIIVGNATALAIDSTWRSL 1272
Query: 811 LTHYKEHECLVEG 823
+ HY ++ LV G
Sbjct: 1273 IQHYYNNKVLVMG 1285
Score = 44.3 bits (103), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 145 CRYCG-VSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGET 203
C CG ++ P +VRC +CR+ +CN+ + + SHIV HL H + + +
Sbjct: 4 CALCGSLAEP--LVRCG--ACREVYCNNFDHKT-SHIVRHLQLTGHDHIEPVSEFYIPSD 58
Query: 204 ILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNM-MKESQSKDNVTIR 253
+L C +C + + LGF+ K ++ ++C C+N M Q+ D R
Sbjct: 59 VLYCNDCETKGITSLGFLPTKADACSGIIC---CVNCRMYHDQTHDTSAWR 106
>gi|303283432|ref|XP_003061007.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
gi|226457358|gb|EEH54657.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
Length = 1099
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 250/456 (54%), Gaps = 52/456 (11%)
Query: 386 PGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 445
P LN SQ A++S L ++L+QGPPGTGKT TS AIV + +G VL + SN
Sbjct: 557 PIAKSLNESQRNALRSALTNRLTLVQGPPGTGKTYTSVAIVKGLLAMNRGPVLCTSDSNT 616
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
AVD L + ++ ++VVR+ S V L Y + + D
Sbjct: 617 AVDNLVQGMADARMRVVRV------GRSEAVRPELLKYVLERM-------------FNDR 657
Query: 506 QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATE 565
G S A +R + Q ADV+CCTC GAG L F F VL+DE++Q TE
Sbjct: 658 TGPERSL----------AQQRALRQ-ADVVCCTCSGAGSDMLEKFNFSAVLLDEASQVTE 706
Query: 566 PECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYR 625
P L+PL G Q+VLVGDH QL P + C+ A AGL+ SLF+RL +G+KP L VQ+R
Sbjct: 707 PSSLVPLSKGCHQLVLVGDHKQLPPTVTCRDAGNAGLSTSLFDRLANMGVKPKLLDVQFR 766
Query: 626 MHPSLSEFPSNSFYEGTLQNGVTINERQS-SGIDFPWPVPNRPMFFY---------VQMG 675
MHP+LS FPS++FY+G +++G +R + SG F WP P+ F G
Sbjct: 767 MHPALSRFPSDAFYDGRVKSGTLARDRPAPSG--FAWPNAGVPIAFVPVGVPGVSGAYGG 824
Query: 676 QEEISASGTSYLNRTEAANVEKIVTTFLRSG---VVPSQIGVITPYEGQRAYIVNYMSRN 732
E +G S++N+ EA V +++ LR+G + P +GV+TPY Q +I + RN
Sbjct: 825 HERREGNG-SFVNQREADVVVDVLSRLLRAGGGELEPRDVGVVTPYAAQVRHIRRQL-RN 882
Query: 733 GALRQQLYKE-----IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTR 787
++ + +E +EV+SVD +QGREK+ +++S VRSN+ +GF++D RR NV LTR
Sbjct: 883 RGIQTGIDRETGKPGVEVSSVDGYQGREKEVMVVSTVRSNDRGTMGFVSDARRCNVTLTR 942
Query: 788 ARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG 823
A+ G+V+ G+P L+ + G + LV G
Sbjct: 943 AKRGVVVCGDPNTLASDHVTWGRWLRWAAAGGLVIG 978
>gi|253741410|gb|EES98280.1| Regulator of nonsense transcripts 1-like protein [Giardia
intestinalis ATCC 50581]
Length = 1309
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 187/497 (37%), Positives = 254/497 (51%), Gaps = 72/497 (14%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-------------V 437
LN SQ ++ VL RPI+L+QGPPG GKT A + + +K V
Sbjct: 802 LNFSQRDVIQYVLSRPITLVQGPPGCGKTFIGACLAWIFSKVYGSDNSSSSPRNTTSVPV 861
Query: 438 LVCAPSNVAVDQLAEKISATGLKVVRLCAKSR-------EAVSSPVEHLTLHY------- 483
L+C PSN A + L + GL VVR+ + +R E + + + LH
Sbjct: 862 LICCPSNTAAESLTLALEPFGLPVVRVVSLARQRLAEYEEPADTYADRVCLHVLFEEILK 921
Query: 484 --------QVRHLDTSEKSELHKL--QQLKDEQGELSSSDEKKYK----------ALKRA 523
Q +L S+ +L + + DE + S+D Y ALK++
Sbjct: 922 LTLLNDNPQSPYLSDFTPSKEARLIYENMTDEIPDKQSNDVYNYLQMKKKDNIDVALKQS 981
Query: 524 TEREISQ-----------SADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL 572
E EIS+ SA V+ CTC + D L+ F +++DESTQA EP+ + +
Sbjct: 982 AEEEISKAMFEIENLIISSAQVVICTCSTSYDNHLSRVHFSSLIVDESTQAIEPDTICAI 1041
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
G +VL+GDH QLGP++ A + L SL+ERL G++P L VQYRMHP+LS
Sbjct: 1042 GHGCSHIVLMGDHKQLGPIVATNIARLSKLDLSLYERLQQAGIEPHSLTVQYRMHPALSA 1101
Query: 633 FPSNSFYEGTLQNGVTINERQ-----SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 687
FPSN+FY G LQNGVT +RQ S FPWPVP+ P FF+ G E+ GTS
Sbjct: 1102 FPSNTFYNGMLQNGVTQMDRQLIPKAMSTESFPWPVPSIPSFFWHVQGTHEV-GHGTSLR 1160
Query: 688 NRTEAANVEKIVTTFLRSGVVPS-QIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N TE VE IV L+ + IG++TPY+ Q+ I + G Y E+ V
Sbjct: 1161 NDTEILCVEAIVDHLLKCYELKQGDIGIVTPYDYQKCQIEMQLKDAG------YSEVFVN 1214
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
SVD+FQG EK+ II S VRS + + IGFL D RRLNV LTR R ++I+GN L+
Sbjct: 1215 SVDAFQGHEKEVIIFSTVRSVD-KHIGFLKDQRRLNVGLTRCRCALIIVGNATALAIDDT 1273
Query: 807 WNGLLTHYKEHECLVEG 823
W L+ HY + LV G
Sbjct: 1274 WRALIQHYYNTKVLVAG 1290
Score = 43.5 bits (101), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 145 CRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETI 204
C CG S +VRC V CR+ +CN+ + + SHIV HL H + + +
Sbjct: 4 CALCG-SPAEPLVRCGV--CREIYCNNFDHKT-SHIVRHLQLTGHDHIEPISEFYIPSDA 59
Query: 205 LECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNM-MKESQSKDNVTIR 253
L C +C + + LGF+ K ++ ++C C+N M Q+ D R
Sbjct: 60 LYCNDCETKGITSLGFLPTKADACSGMIC---CVNCRMYHEQTHDTSAWR 106
>gi|308161426|gb|EFO63875.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
P15]
Length = 1303
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 252/493 (51%), Gaps = 68/493 (13%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAI------VYHMAKQGQGQ-------- 436
LN SQ ++ VL RPI+L+QGPPG GKT A + VY + G
Sbjct: 800 LNFSQKDVIQYVLSRPITLVQGPPGCGKTFIGACLAWLFSKVYGSSDHDSGSFRQTALVP 859
Query: 437 VLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS----------------------- 473
VL+C PSN A + L + GL VVR+ + +R+ ++
Sbjct: 860 VLICCPSNTAAESLTLALEPFGLPVVRVVSLARQRLAEYEESPNTYADRVCLHVLFEEVL 919
Query: 474 ------------SPVEHLTLHYQ--VRHLDTSEKSELHKLQQLKDEQG---ELSSSDEKK 516
+P + L Y+ + + + +E++ Q+K ++ L S E++
Sbjct: 920 KLALGDDAPSDFTPSKEARLIYENMLDEIPIKQFNEVYNYLQMKKKENIDVALKQSAEEE 979
Query: 517 YKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA 576
E I SA V+ CTC + D L+ F +++DESTQA EP+ L + G
Sbjct: 980 ISKAMFEIENIIISSAKVVICTCSTSYDNHLSRVHFSSLIVDESTQAIEPDTLCAIGHGC 1039
Query: 577 KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSN 636
+VL+GDH QLGP++ A + L SL+ERL G++P L VQYRMHP+LS FPSN
Sbjct: 1040 SHIVLMGDHKQLGPIVATNIARHSKLDLSLYERLQRAGIEPHSLTVQYRMHPALSAFPSN 1099
Query: 637 SFYEGTLQNGVTINERQ-----SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTE 691
+FY G LQNGVT +RQ S FPWP+P+ P FF+ G EI GTS N TE
Sbjct: 1100 TFYNGMLQNGVTQADRQLVPKPLSTESFPWPMPSTPSFFWHVQGTHEI-GHGTSLRNDTE 1158
Query: 692 AANVEKIVTTFLRSGVVPS-QIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 750
VE IV L+ + IG++TPY+ Q+ I + G Y E+ V SVD+
Sbjct: 1159 ILCVEAIVDQLLKCYELKQGDIGIVTPYDYQKCQIEMQLKDAG------YSEVFVNSVDA 1212
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
FQG EK+ II S VRS + + IGFL D RRLNV LTR R ++I+GN L+ W L
Sbjct: 1213 FQGHEKEVIIFSTVRSVD-KHIGFLKDQRRLNVGLTRCRCALIIVGNATALAIDDTWRSL 1271
Query: 811 LTHYKEHECLVEG 823
+ HY ++ LV G
Sbjct: 1272 IQHYYNNKVLVVG 1284
Score = 43.5 bits (101), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 145 CRYCG-VSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGET 203
C CG ++ P +VRC +CR+ +CN + + SHIV HL H + + +
Sbjct: 4 CALCGSLAEP--LVRCG--ACREVYCNHFDHKT-SHIVRHLQLTGHDHIEPVSEFYIPSD 58
Query: 204 ILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNM-MKESQSKDNVTIR 253
+L C +C + + LGF+ K ++ ++C C+N M Q+ D R
Sbjct: 59 VLYCNDCETKGITSLGFLPTKADACSGIIC---CVNCRMYHDQTHDTSAWR 106
>gi|308810357|ref|XP_003082487.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116060956|emb|CAL56344.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 1079
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 237/418 (56%), Gaps = 35/418 (8%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQL 450
LNASQ A+K+ L+R ++LIQGPPGTGKT TS AIV M + G G VL + SN AVD +
Sbjct: 632 LNASQRDAMKAALERRLTLIQGPPGTGKTHTSVAIVRGMLEIGHGPVLCTSDSNTAVDNM 691
Query: 451 AEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELS 510
E ++ G+ V+RL EAV + YQ+ +
Sbjct: 692 VEGLAKAGVNVIRL--GRPEAVRPDLAR----YQIENAIPP------------------G 727
Query: 511 SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLI 570
++ + Y+A RA + A IC TC GAG L F V++DE++Q TEP L+
Sbjct: 728 ATKHEAYEAQLRAV-----RYAQAICATCSGAGSDFLDRINFSAVMLDEASQVTEPMSLV 782
Query: 571 PLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSL 630
PL G +Q+VLVGDH QL P ++ ++A AG+ SLF+RL G+KP L Q+RMHP++
Sbjct: 783 PLANGCQQLVLVGDHKQLPPTVVSREAELAGMTLSLFDRLTRAGVKPYLLDTQFRMHPAI 842
Query: 631 SEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRT 690
S FPS+SFY G +++G +R + F WP+P+ P+ F + + SY NR
Sbjct: 843 SHFPSHSFYNGLVKSGTPAKDRPAPK-GFQWPIPSVPIAFCPTPENSKETNDNLSYSNRV 901
Query: 691 EAANVEKIVTTFLRSGVV-PSQIGVITPYEGQRAYIVNYMS----RNGALRQQLYKEIEV 745
EA V +I+ L +G + P +G++TPY Q I + + R G R IEV
Sbjct: 902 EAERVLEILLGVLSAGELRPCHVGIVTPYAAQVKLIRSMLRQRGVRTGVDRDTGEAGIEV 961
Query: 746 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+SVD +QGREK+ +I+S VR+N+ IGF+ D RR NV LTRAR G++++G+ LSK
Sbjct: 962 SSVDGYQGREKELMIVSTVRANDLNTIGFVADARRCNVTLTRARRGVIVVGHASTLSK 1019
>gi|429964317|gb|ELA46315.1| hypothetical protein VCUG_02203 [Vavraia culicis 'floridensis']
Length = 849
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/347 (44%), Positives = 211/347 (60%), Gaps = 20/347 (5%)
Query: 490 TSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLAN 549
T + +L KL Q + + + ++ ++ L+ + A VI CTCV AG
Sbjct: 502 TIDSEKLSKLMQRMNVKNKKTTGKDR----LRDYLRYSFVKDARVITCTCVTAGQELFKR 557
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F+F VLIDE+ QATEP L+PL+ ++++LVGDH QLGP I+ KKAA AGL SLFER
Sbjct: 558 FKFPYVLIDEAVQATEPLTLVPLIYSCRKLILVGDHKQLGPTILNKKAANAGLRVSLFER 617
Query: 610 LVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI---NERQSSGIDFPWPVPNR 666
L+ LG+ P L VQYRMHP L E+ SN+FY+G L + + R +GI + +P
Sbjct: 618 LIRLGVVPYLLTVQYRMHPVLCEWVSNTFYDGALVSAHYTHGAHARYGTGITAWFNLP-M 676
Query: 667 PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV 726
P FFYV G+EE+ SGTSYLN+ EA I+ +GV +++G+ITPYEGQR
Sbjct: 677 PTFFYVSRGREELFISGTSYLNKAEAQQCLAIIRHLKMNGVRETEVGIITPYEGQRV--- 733
Query: 727 NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 786
+SR A EVA+VD+FQGREK +II+S VRSN IGF++D RR+ VALT
Sbjct: 734 -LLSRLTAC--------EVANVDAFQGREKAFIIISLVRSNSINDIGFVSDRRRMCVALT 784
Query: 787 RARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
RA++G+ I+GNP K +W L+ +Y+ LVEG + L++ V
Sbjct: 785 RAKHGLFIVGNPGTFCKNKMWKELIAYYQGKGVLVEGEVEELRRCEV 831
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 132/248 (53%), Gaps = 20/248 (8%)
Query: 242 KESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGH 301
KE +++ + +R++ N + A+F F +++ R+ GDE+++ +
Sbjct: 187 KERLTREKIFVRFE-HKNDRIFAHFSFCRDEMCARINIGDEVKI----------FVHTST 235
Query: 302 VIKLTAQEEVALELRASQGVPVDINH---GFSVDFVWKSTSFDRMQGAMKTFAVD-ETSV 357
+ + + E ++ V D+ + + ++F W++ + RM+ A+ + +
Sbjct: 236 LKGFICNDTIYTEENIAEIVNTDVKYPDGEYRMEFPWRNVGYQRMKRALTSLKKKCAHRI 295
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTG 417
+ I+ + M +P R +P LN Q A+ + L ++L+QGPPGTG
Sbjct: 296 TQLIWKGKVKKRKSAHMHEIVVPDR-----MPPLNECQKIAIDAALNNHLTLVQGPPGTG 350
Query: 418 KTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE 477
KT+T+AAIVY++ K +G++LV APSN+AVD L +I G+ V+R+ +++RE + S ++
Sbjct: 351 KTITTAAIVYNLLKHKKGKILVVAPSNIAVDNLTRRILKCGIDVLRIVSRNREGLVSDLD 410
Query: 478 HLTLHYQV 485
+TLH +V
Sbjct: 411 DITLHKKV 418
>gi|255082057|ref|XP_002508247.1| predicted protein [Micromonas sp. RCC299]
gi|226523523|gb|ACO69505.1| predicted protein [Micromonas sp. RCC299]
Length = 1188
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 241/433 (55%), Gaps = 42/433 (9%)
Query: 388 LPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
+ +N SQ A+++ L + ++LIQGPPGTGKT T+ A+V + +L + SN+AV
Sbjct: 650 MAHMNKSQTDALEAALFQRVTLIQGPPGTGKTHTAVALVQMWLRNRTSPILCTSDSNIAV 709
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE-KSELHKLQQLKDEQ 506
D L + +S G++V R+ EAV + + + V + E S + K QQ
Sbjct: 710 DNLVDGLSRAGVRVARIGRP--EAVRQDL----MQFMVESIAGIEPGSNMSKDQQ----- 758
Query: 507 GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEP 566
Y+A+ R A+V+C TC GAG L F F+ LIDE+TQATEP
Sbjct: 759 ----------YQAINGVLRR-----AEVVCATCAGAGSDILERFSFQACLIDEATQATEP 803
Query: 567 ECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRM 626
++PL G QVVL+GD QL P I+ ++A AGL SLFER++ G++ L+VQYRM
Sbjct: 804 ATVVPLTKGCSQVVLIGDQKQLPPTIISREADAAGLGTSLFERMLARGIRAFMLKVQYRM 863
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY-VQMGQEEISASGTS 685
HP+++ +PS +FY G L +G + R++ + F WPVP P+ F V G E + G+S
Sbjct: 864 HPAIAAYPSKAFYSGALLSGTPPSARRAP-MGFDWPVPAVPLAFVDVPDGYER--SDGSS 920
Query: 686 YLNRTEAANVEKIVTTFLRS-GVVPSQIGVITPYEGQRAYIVNYMSRNG-ALRQQL---- 739
N EA V IV V+ +IG++TPY Q I ++ N +R +
Sbjct: 921 QTNPVEAQKVVNIVKKLAAGHDVIFGEIGIVTPYSAQVRAIKRLLNGNKPEVRSRFDAPA 980
Query: 740 ----YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
+ +EV SVD FQGREK+ I+ C R+N + +GFL DPRR+NV LTRAR G++I+
Sbjct: 981 DPNTLQALEVCSVDGFQGREKEVIVFCCTRANPNGNVGFLADPRRVNVMLTRARRGLIII 1040
Query: 796 GNPKVLSKQP-LW 807
GN L + P +W
Sbjct: 1041 GNLGTLRRDPEVW 1053
>gi|123448689|ref|XP_001313071.1| possible regulator of nonsense transcripts [Trichomonas vaginalis
G3]
gi|121894941|gb|EAY00142.1| possible regulator of nonsense transcripts, putative [Trichomonas
vaginalis G3]
Length = 814
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 243/446 (54%), Gaps = 17/446 (3%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
ELN SQ AV++ L + + IQGPPGTGKT + AIV G VL+ SNV D
Sbjct: 345 ELNRSQGKAVEAALSQRFTYIQGPPGTGKTTSITAIVKSFVDGGIFPVLIVGHSNVTADF 404
Query: 450 LAEKISATGLKVVRLC---------AKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQ 500
+S GLKV R+ A + S + Y+ T +K++ ++
Sbjct: 405 GCLALSNIGLKVGRVLSLEIEDAIQAAKLNEIDSEYNFIIPGYERSKFSTFQKAKKQYIE 464
Query: 501 QLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDES 560
+ E SS +K+K + E+ I VIC T +G R+ FR ++ DE+
Sbjct: 465 KYGTEPDLASSKSYRKFKKI----EQRIIADCQVICVTSSTSGSVRVEG-NFRAIIFDEA 519
Query: 561 TQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRL 620
Q +P+ LI + +++VLVGD QLGP I AG +L ++LV LGL P L
Sbjct: 520 GQCLDPDFLISMKHNPERLVLVGDTFQLGPTIQNNAVRNAGFGVNLMKKLVKLGLIPNIL 579
Query: 621 QVQYRMHPSLSEFPSNSFYEGTLQNGVTINER--QSSGIDFPWPVPNRPMFFYVQMGQEE 678
QYRMHPS+ EFPS +FY+ +++G++ +R + S +F +P P P+ F+ G+E+
Sbjct: 580 TYQYRMHPSILEFPSKTFYKNLVKSGISAEQRIYKFSKPNFKFPNPQIPLMFWDVEGKEQ 639
Query: 679 ISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSR-NGALRQ 737
G SY ++ V +++ SGV + IG+ITPY GQ Y+++ + +
Sbjct: 640 SDGDGKSYWCLSQCNAVSQVLDALFNSGVPANSIGIITPYNGQNDYLMDNLDYICESCSA 699
Query: 738 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 797
+ K +E+A+VD FQGREKD+II + VRSNE+ IGFL+D RLNV++TRA+YG++++G+
Sbjct: 700 EYIKNVEIATVDGFQGREKDFIIFNLVRSNENYQIGFLSDIERLNVSITRAKYGLIVIGH 759
Query: 798 PKVLSKQPLWNGLLTHYKEHECLVEG 823
+ SK L+ + E+ C + G
Sbjct: 760 SRTFSKTKLFCDWFNFFIENNCFMAG 785
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 142 EHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
E C +CG + + W CN++ + SH+V L ++ KE+ LH +P
Sbjct: 3 EPECVFCGCKEITSLAK--PKDYNFWLCNAKKGLTASHLVQFLKKSDCKEIELHPGNPFH 60
Query: 202 ETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 237
+C CG N+F LG + +T ++V C C
Sbjct: 61 GIEFKCAVCGQTNIFDLGILITQTNQIIV--CSSQC 94
>gi|412986744|emb|CCO15170.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 974
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 253/459 (55%), Gaps = 55/459 (11%)
Query: 357 VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGT 416
V+G Y H+ VRN + R+F LN SQ AV + L+R +SLIQGPPGT
Sbjct: 521 VNGGRYEHV---------VRN-VTRQFN------LNESQQRAVSATLERRLSLIQGPPGT 564
Query: 417 GKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 476
GKT TS AIV + G+G VL + SN AVD L E ++ G++VVR+ + V
Sbjct: 565 GKTHTSVAIVRGLIDIGRGPVLCTSDSNTAVDNLVEGLARAGVRVVRI------GRTEAV 618
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
YQ+ ++ + + Y+A RA + A +C
Sbjct: 619 RQDLAMYQIENMVPP------------------GCTKHEAYEAQIRAV-----RYAQAVC 655
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
CTC G+G L F V++DE++Q TEP L+P+ G +Q+VLVGDH QL P I+ ++
Sbjct: 656 CTCAGSGSDFLDRISFSAVMLDEASQVTEPMSLVPISRGCQQLVLVGDHKQLPPTILSRE 715
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A GL S+F+RLV LG+ P L Q+RMHP+L +FPS++FY+ L+NG T + +
Sbjct: 716 AELGGLTLSMFDRLVSLGVVPYMLDTQFRMHPALGKFPSDAFYDKQLKNG-TPRAMRPTP 774
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGT-SYLNRTEAANVEKIVTTFLRSGVV-PSQIGV 714
I F WP PN P+ + + + + SY NR EA V + FL + + P IG+
Sbjct: 775 IGFNWPQPNVPICYIPTHPTNAMENNDSNSYSNRAEAELVLAYLRGFLSAQELRPKDIGI 834
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKE-----IEVASVDSFQGREKDYIILSCVRSNEH 769
+TPY Q ++ M R ++ + + IEV+SVD FQGREK+ +I+S VR+N +
Sbjct: 835 VTPYAAQ-VRLLRQMIRRAGIQTGVDRNTGECGIEVSSVDGFQGREKELMIVSTVRANTN 893
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVL-SKQPLW 807
+ +GF++DPRR NV LTRAR G+V++G+ L + +W
Sbjct: 894 RSLGFVSDPRRCNVTLTRARRGLVVIGHENTLRCDRKVW 932
>gi|412993880|emb|CCO14391.1| predicted protein [Bathycoccus prasinos]
Length = 1285
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 240/443 (54%), Gaps = 39/443 (8%)
Query: 386 PGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 445
P + +N SQ A+++ L + I+LIQGPPGTGKT T+ A+V K +L + SN+
Sbjct: 723 PAMQHMNKSQHEALRAALFQRITLIQGPPGTGKTHTAVALVQMWLKCRTMPILCTSDSNI 782
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE-KSELHKLQQLKD 504
AVD L + +S G++V R+ EAV + + + V + E S + K QQ
Sbjct: 783 AVDNLVDGLSRAGVRVARIGRP--EAVRQDL----MPFMVESIAGIEPGSNMSKDQQ--- 833
Query: 505 EQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT 564
Y+A+ R A+VIC TC GAG L F F LIDE+TQAT
Sbjct: 834 ------------YQAINGVLRR-----AEVICATCAGAGSDILERFSFAACLIDEATQAT 876
Query: 565 EPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQY 624
EP ++P+ G KQ+VL+GD QL P I+ + A GL SLFER++ G++ L+VQY
Sbjct: 877 EPATVVPMTKGCKQIVLIGDQNQLPPTIISRDADERGLGTSLFERMLSRGIRTFMLKVQY 936
Query: 625 RMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGT 684
RMHP++++FPS FY L +G ++R++ F WPVP P+ F V + E + G
Sbjct: 937 RMHPAIAKFPSQQFYSNELLSGTPPSQRRAPQ-GFDWPVPAVPLAF-VDCPEGEERSDGA 994
Query: 685 SYLNRTEAANVEKIVTTFLRS-GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL---- 739
S +N EA V +V + V+ IG+++PY Q I + N R +
Sbjct: 995 SQMNTIEAQKVVTLVKKLMAEHEVLACDIGIVSPYAAQVRAIKKLLQPNAVKRTRFDAPA 1054
Query: 740 ----YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
IEV S+D FQGREK+ I+ SC R+N +GFL D RR+NV LTRAR G++I+
Sbjct: 1055 APDSDAAIEVCSIDGFQGREKEVIVFSCTRANLMGNVGFLADRRRVNVMLTRARRGLIIV 1114
Query: 796 GNPKVLSKQP-LWNGLLTHYKEH 817
G+ + L +P +W LT E+
Sbjct: 1115 GHLRTLRGEPEVWGPWLTWAGEN 1137
>gi|440491771|gb|ELQ74381.1| RNA helicase nonsense mRNA reducing factor (pNORF1)
[Trachipleistophora hominis]
Length = 339
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/307 (47%), Positives = 194/307 (63%), Gaps = 16/307 (5%)
Query: 530 QSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLG 589
+ A VI CTCV AG F+F VLIDE+ QATEP L+PL+ ++++LVGDH QLG
Sbjct: 27 KDARVITCTCVTAGQELFKRFKFPYVLIDEAVQATEPLTLVPLIYSCRKLILVGDHKQLG 86
Query: 590 PVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTL---QNG 646
P I+ K+AA AGL SLFERL+ LG+ P L VQYRMHP L E+ SN+FY+G L Q
Sbjct: 87 PTILNKRAANAGLHVSLFERLIRLGVVPYLLTVQYRMHPVLCEWVSNTFYDGALVSAQYT 146
Query: 647 VTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG 706
+ R S+G + +P P FFYV G+EE+ SGTSYLN+ EA I+ +G
Sbjct: 147 HGAHVRYSAGTTAWFNLP-MPTFFYVSRGKEELFVSGTSYLNKAEAQQCLAIIRHLKMNG 205
Query: 707 VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS 766
V + +G+ITPYEGQR +SR A EVA+VD+FQGREK +II+S VRS
Sbjct: 206 VRETDVGIITPYEGQRV----LLSRLTA--------CEVANVDAFQGREKAFIIISLVRS 253
Query: 767 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLN 826
N IGF++D RR+ VALTRA++G+ I+GNP K +W L+ +Y+ LVEG +
Sbjct: 254 NNINDIGFVSDRRRMCVALTRAKHGLFIVGNPGTFCKNKMWKELIAYYQGKGVLVEGEVE 313
Query: 827 NLKQSMV 833
L++ V
Sbjct: 314 ELRRCEV 320
>gi|308810613|ref|XP_003082615.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116061084|emb|CAL56472.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 545
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/455 (39%), Positives = 243/455 (53%), Gaps = 32/455 (7%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV---YHMA----KQGQG-QVLVCAP 442
LN+SQ AVKS +++ QGPPGTGKT T A + H+A ++G+G VL A
Sbjct: 86 LNSSQRVAVKSATSSSLAVWQGPPGTGKTRTLIAYIGAAVHLASIQRRRGKGPVVLASAA 145
Query: 443 SNVAVDQLAEK-------ISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSE 495
SNVAVD + E I L+VVRL A ++ V ++ LTL Q+ ++
Sbjct: 146 SNVAVDNILEGLAKEKFVIDGRPLRVVRLGAPAK--VQPWLQELTLDAQIAQHPLGRQAA 203
Query: 496 LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
+ ++ G + K+ L+ + I +S DV+C TCVGAGD L + F
Sbjct: 204 AMR-DAIRGLSGPAYARQRKQATQLELTAAKSILKSVDVVCSTCVGAGDDLLEDLTFPVT 262
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL 615
++DE+TQ TEP LI L A VLVGD QL P ++ + A AGL S+FER+ LG+
Sbjct: 263 VLDEATQCTEPAALIALS-KALSAVLVGDSRQLPPTVVSRDAVDAGLQISIFERMERLGV 321
Query: 616 KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER-QSSGIDFPWPVPNRPMFFYVQM 674
K L +QYRMHP ++EFPS +FY G + + T +R G+ WP PN P+ F
Sbjct: 322 KVSLLDLQYRMHPLIAEFPSQAFYSGKVGSAPTPQDRPIVPGV--AWPKPNVPVVFLEIN 379
Query: 675 GQEEISASGTSYLNRTEAANVEKIVTTFLRSGVV--PSQIGVITPYEGQ-RAYIVNYMSR 731
E + G S N EA +V L SG + P IGVI+PY Q R Y
Sbjct: 380 DAECRAPDGNSLYNVEEAKTAITVVKKILASGDLAGPGDIGVISPYAAQVRLLQEEYGVL 439
Query: 732 NGALRQQL-------YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 784
A R L KE+E+ SVD FQGREK+ I+L VRSN GIGF++DPRRLNV
Sbjct: 440 GTAKRNYLDYTDEDKMKELEIRSVDGFQGREKEVIVLCTVRSNTGGGIGFVDDPRRLNVG 499
Query: 785 LTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHEC 819
+TRAR G+++LGN + LS +W ++ C
Sbjct: 500 ITRARRGLIVLGNRRTLSTNEIWRKWFKWIDQYGC 534
>gi|145353588|ref|XP_001421091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581327|gb|ABO99384.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 176/462 (38%), Positives = 247/462 (53%), Gaps = 32/462 (6%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV---YHMA----KQGQGQ-VLVCAP 442
LN SQ AVKS L +++ QGPPGTGKT T A + H+A ++G+G VL A
Sbjct: 10 LNPSQRVAVKSALSSSLAVWQGPPGTGKTRTLIAYIGAAVHLASIQKRRGRGPIVLASAA 69
Query: 443 SNVAVDQLAEKISATG-------LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSE 495
SNVAVD + E ++ L+VVR+ A ++ V ++ LTL Q+ ++
Sbjct: 70 SNVAVDNILEGLAKESFIVDGRPLRVVRVGAPAK--VQPWLQQLTLDAQIALHPLGRQAA 127
Query: 496 LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
+ + ++ + G + K+ L+ + I +S DV+C TCVGAGD L +F F
Sbjct: 128 AMR-EAIRGQSGPAFARQRKQATQLELTAAKSILKSVDVVCTTCVGAGDELLEDFTFPVA 186
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL 615
++DE+TQ TEP LI L A VLVGD QL P ++ + A AGL S+FER+ LG+
Sbjct: 187 VVDEATQCTEPGALISLT-KALSAVLVGDSKQLPPTVVSRDAVDAGLQVSIFERMERLGV 245
Query: 616 KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER-QSSGIDFPWPVPNRPMFFYVQM 674
K L +QYRMHP ++EFPS +FY+G + + T +R GI WP PN P+ F
Sbjct: 246 KVSLLDMQYRMHPQIAEFPSLAFYKGKVGSVPTPQDRPLVPGI--AWPSPNVPVAFVEIS 303
Query: 675 GQEEISASGTSYLNRTEAANVEKIVTTFLRSGVV--PSQIGVITPYEGQRAYIVNYMSRN 732
E + G S N EA +V L +G + P IGVI+PY Q +
Sbjct: 304 APESRAPDGNSLYNVGEAKMAIGVVRKLLAAGDLAGPGDIGVISPYAAQVRRLQEEYGVG 363
Query: 733 GALRQQLY--------KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 784
G+ ++ +E+E+ SVD FQGREK+ I+L VRSN IGF+ DPRRLNV
Sbjct: 364 GSPKRNYLDYTEEDKIEELEIRSVDGFQGREKEVIVLCTVRSNPSGDIGFVADPRRLNVG 423
Query: 785 LTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLN 826
+TRA+ G+++LGN K LS +W E C V N
Sbjct: 424 ITRAKRGLIVLGNRKTLSNNEMWRSWFKWIDEQNCAVSDTTN 465
>gi|238880082|gb|EEQ43720.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1105
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 278/549 (50%), Gaps = 75/549 (13%)
Query: 318 SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRN 377
SQ +P + H ++ + S R+ AMKT + LLG E Q+
Sbjct: 578 SQALPRTV-HVSNLKILPASQPVSRVLNAMKTIN------NASFTRMLLGKEPIKQIDFK 630
Query: 378 TLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQ-GQGQ 436
+ G LN SQ V+SVL I+++QGPPGTGKT T I+ +
Sbjct: 631 NFLKFQGQ----NLNESQKKGVQSVLNNSITVLQGPPGTGKTSTIYEIILQLLDSLNTYP 686
Query: 437 VLVCAPSNVAVDQLAEKI-SATGLKVVRLCAKSREA---VSSPVEHLTLHYQVRHLDTSE 492
+LV A SN+A+D +AEK+ + G ++R+ A +E S P+ + LH+++
Sbjct: 687 ILVVAASNIAIDNIAEKLMTKHGKDILRITAAEKERDYNRSHPLASICLHHKMYD----- 741
Query: 493 KSELHKLQQLKDEQGE-----LSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRL 547
+ K QQ+ DE + ++ KKY + +I A V+ T V AG +
Sbjct: 742 -AMPMKYQQVMDEMKRGMAPSIGTTAYKKYAQERFFLSNQIVTQAKVVLATPVVAGGIKS 800
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
N R V+IDE+TQ++EP LIPL L +++VLVGD QL + L+ SL
Sbjct: 801 LN-NVRVVIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQLSCFSLI-----PNLSLSL 854
Query: 607 FERLVLLGL--KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP 664
FER++L G P L QYRMHP +SEFP FY G L++G+ N RQS G V
Sbjct: 855 FERVLLNGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQSEG------VI 908
Query: 665 NRPMFFYVQMGQEEISA--------SGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGVI 715
+ P++F+ G + G +Y NR E A +++++ T + GV P QIG+I
Sbjct: 909 SSPLYFWDTKGNAREQSVRNFLREDGGYTYTNRDEIAYIQQVLRTLIITKGVKPEQIGII 968
Query: 716 TPYEGQRAYIVNYMSRNGALR---QQLYKEIEV--------------------ASVDSFQ 752
TPY GQR I + ++ + +Q+ E+++ AS+D+FQ
Sbjct: 969 TPYSGQRDLISATLVKDDVINPSNEQMKTEVDIDDLKNDSKPVTIHIVSGIMIASIDAFQ 1028
Query: 753 GREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLL 811
GREKDY+I+SCVRSN IGFL D RRLNVALTRA+YG++++G+ K L LW L
Sbjct: 1029 GREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQNGDKLWKEYL 1088
Query: 812 THYKEHECL 820
+ + +
Sbjct: 1089 QYLDSKKAI 1097
>gi|328866870|gb|EGG15253.1| hypothetical protein DFA_10087 [Dictyostelium fasciculatum]
Length = 854
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 248/466 (53%), Gaps = 28/466 (6%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSA---AIVYHMAKQGQGQVLVCAPS--NV 445
LN SQ A++ + R SLIQGPPGTGK+ T+ ++ H + G+ V + A S N
Sbjct: 295 LNPSQKDAIEKSICRRASLIQGPPGTGKSTTAIYLLRLLVHRKQSGKSNVKILATSFTNT 354
Query: 446 AVDQLAEKISATGLKVVRL--CAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLK 503
VD L E + G+ V+RL K RE + + ++ D+S K +
Sbjct: 355 GVDNLLEGLLKAGVNVLRLGDANKVREELRCATLEYRMEEELNRWDSSAK---------R 405
Query: 504 DEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQA 563
QG S ++ + R IS+ ADVIC TC+G+G L + +F+ +++DE+TQA
Sbjct: 406 SNQGSKPGSSSYYMQSEREIKSRLISE-ADVICSTCIGSGHEMLMDEKFQIIVVDEATQA 464
Query: 564 TEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQ 623
TEP LIPL+ ++Q+ L GD QL P+I+ KA GL S+F+RL GL P L Q
Sbjct: 465 TEPAILIPLLKSSEQMYLFGDQNQLAPIILSHKAIEGGLNISMFDRLFKSGLTPFLLNTQ 524
Query: 624 YRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY-VQMGQEEISAS 682
YRMH S+S+FP + FY G L NG T + I WP + P+ F + G+EEI
Sbjct: 525 YRMHSSISDFPRHHFYNGLLNNG-TNDSNLKIPIGIKWPQIDFPVVFIDISNGREEIKHH 583
Query: 683 GTSYLNRTEAANVEKIVTTFLRS--GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLY 740
S N EA V ++ + L + + + IG+ITPY Q +I S + + R
Sbjct: 584 --SLYNNEEAVAVVQVAESLLENDESLFRNNIGIITPYHAQVKHINQVFSNDKSWRGA-- 639
Query: 741 KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKV 800
+ VA+VDS+QGRE D II S VRSN IGFL D RRLNV++TRA+ G+V++GN
Sbjct: 640 -QPSVATVDSYQGREMDVIIFSTVRSNTKGNIGFLKDWRRLNVSITRAKRGLVVIGNFGT 698
Query: 801 L--SKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYND 844
+ S W + K+ +V+ + +++S + +K +D
Sbjct: 699 INNSSDEHWKAYVQWAKDKNIMVKSLDSIIEKSTANKKGKRKARSD 744
>gi|68488735|ref|XP_711793.1| potential helicase, zinc finger protein [Candida albicans SC5314]
gi|68488772|ref|XP_711775.1| potential helicase, zinc finger protein [Candida albicans SC5314]
gi|46433099|gb|EAK92553.1| potential helicase, zinc finger protein [Candida albicans SC5314]
gi|46433118|gb|EAK92571.1| potential helicase, zinc finger protein [Candida albicans SC5314]
Length = 1105
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 277/549 (50%), Gaps = 75/549 (13%)
Query: 318 SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRN 377
SQ +P + H ++ + S R+ AMKT + LLG E Q+
Sbjct: 578 SQALPRTV-HVSNLKILPASQPVSRVLNAMKTIN------NASFTRMLLGKEPIKQIDFK 630
Query: 378 TLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQ-GQGQ 436
+ G LN SQ V+SVL I+++QGPPGTGKT T I+ +
Sbjct: 631 NFLKFQGQ----NLNESQKKGVQSVLNNSITVLQGPPGTGKTSTIYEIILQLLDSLNTYP 686
Query: 437 VLVCAPSNVAVDQLAEKI-SATGLKVVRLCAKSREA---VSSPVEHLTLHYQVRHLDTSE 492
+LV A SN+A+D +AEK+ + G ++R+ A +E S P+ + LH+++
Sbjct: 687 ILVVAASNIAIDNIAEKLMTKHGKDILRITAAEKERDYNRSHPLASICLHHKMYD----- 741
Query: 493 KSELHKLQQLKDEQGE-----LSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRL 547
+ K QQ+ DE + ++ KKY + +I A V+ T V AG +
Sbjct: 742 -AMPMKYQQVMDEMKRGMAPSIGTTAYKKYAQERFFLSNQIVTQAKVVLATPVVAGGIKS 800
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
N R V+IDE+TQ++EP LIPL L +++VLVGD QL + L+ SL
Sbjct: 801 LN-NVRVVIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQLSCFSLI-----PNLSLSL 854
Query: 607 FERLVLLGL--KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP 664
FER++L G P L QYRMHP +SEFP FY G L++G+ N RQS G V
Sbjct: 855 FERVLLNGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQSEG------VI 908
Query: 665 NRPMFFYVQMGQEEISA--------SGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGVI 715
+ P++F+ G + G +Y NR E +++++ T + GV P QIG+I
Sbjct: 909 SSPLYFWDTKGNAREQSVRNFLREDGGYTYTNRDEIGYIQQVLRTLIITKGVKPEQIGII 968
Query: 716 TPYEGQRAYIVNYMSRNGALR---QQLYKEIEV--------------------ASVDSFQ 752
TPY GQR I + ++ + +Q+ E+++ AS+D+FQ
Sbjct: 969 TPYSGQRDLISATLVKDDVINPSNEQMKTEVDIDDLKNDSKPVTIHIVSGIMIASIDAFQ 1028
Query: 753 GREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLL 811
GREKDY+I+SCVRSN IGFL D RRLNVALTRA+YG++++G+ K L LW L
Sbjct: 1029 GREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQNGDKLWKEYL 1088
Query: 812 THYKEHECL 820
+ + +
Sbjct: 1089 QYLDSKKAI 1097
>gi|260949873|ref|XP_002619233.1| hypothetical protein CLUG_00392 [Clavispora lusitaniae ATCC 42720]
gi|238846805|gb|EEQ36269.1| hypothetical protein CLUG_00392 [Clavispora lusitaniae ATCC 42720]
Length = 1128
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 260/479 (54%), Gaps = 63/479 (13%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQ-GQGQVLVCAPSNVAVDQ 449
N SQ A++SVL I+++QGPPGTGKT T I+ + + +LV A SN+A+D
Sbjct: 661 FNDSQKVAIQSVLNNSITVLQGPPGTGKTSTIYEIILQLLENLNTFPILVVAASNIAIDN 720
Query: 450 LAEKISATGLK-VVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
+AEK+ K ++R+ + +E + P+ + LH++V + LH + +++
Sbjct: 721 IAEKLLPKHEKSILRIVSNEKEPEYNREHPLSSICLHHKV-----FDGLPLHFQETIREM 775
Query: 506 QGELSSSDEKKYKALKRA----TEREISQSADVICCTCVGAGDPRLANF-RFRQVLIDES 560
+ SS + +YK L A T + IS SA VI T V AG +L + V++DE+
Sbjct: 776 RRPGSSISQNQYKKLLTAQIDYTNKLIS-SARVIFTTTVVAGGNQLKPVQKMPVVIMDEA 834
Query: 561 TQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG--LKP 617
TQ++EP LIPL + G ++ V VGD QL + L+ SLFER++L G P
Sbjct: 835 TQSSEPTTLIPLSMPGVEKFVFVGDQKQLSSF-----SQVPNLSLSLFERILLNGSYKTP 889
Query: 618 IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQE 677
L QYRMHP++S FP FY G L++G+T +R I P P+ F+ G+
Sbjct: 890 HMLDTQYRMHPAISAFPRKKFYGGLLKDGITAADRTKPNI------PANPVLFWDTCGKA 943
Query: 678 EISA--------SGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGVITPYEGQRAYIVNY 728
+G +Y NR E VEK++T + G+ IGVITPY GQR + +
Sbjct: 944 REGTVRARFREDNGLTYANRGEIDYVEKVLTALIYEKGIERKDIGVITPYRGQRDMMSST 1003
Query: 729 MSRNGAL------------RQQLYKE-----------IEVASVDSFQGREKDYIILSCVR 765
+ +N + R + E I +AS+D+FQGREKD++++SCVR
Sbjct: 1004 LVKNDMINPEKVEVQIEVDRDDFFNESKPITIHMVSDIMIASIDAFQGREKDFLVMSCVR 1063
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLVEG 823
SNE IGFLND RR+NVALTRA+YG++++G+ + LS+ PLWN + K + C++ G
Sbjct: 1064 SNEQNKIGFLNDARRMNVALTRAKYGLILIGDMECLSRSDPLWNEYIETLKANNCILTG 1122
>gi|354546110|emb|CCE42839.1| hypothetical protein CPAR2_204820 [Candida parapsilosis]
Length = 1078
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 260/470 (55%), Gaps = 60/470 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKT-VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A++SVL IS++QGPPGTGKT I+ + VLV A SN+A+D
Sbjct: 615 LNDSQKAAIQSVLNNKISVVQGPPGTGKTSAIYETIIQLLEALNTFPVLVVAASNIAIDN 674
Query: 450 LAEKISAT-GLKVVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
+AEK+ G ++R+ A S+E + P+ + LH+++ S H+ Q
Sbjct: 675 IAEKLLPKHGKSILRIAATSKEREYNRDHPLASICLHHKI----FDAMSMKHQQVQNDMR 730
Query: 506 QGELSSSDEKKYKALKR--ATEREISQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQ 562
+G SS+ K AL++ T+ +++Q A VI T V AG P+L + + V++DE+TQ
Sbjct: 731 RGTSVSSNAYKQFALEKFQITKEQVAQ-AKVILTTTVVAGGPQLKSLAKCPVVIMDEATQ 789
Query: 563 ATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG--LKPIR 619
++EP LIPL + G ++ V VGD QL + L+ SLFER++L G + P
Sbjct: 790 SSEPSTLIPLAVPGVEKFVFVGDQRQLSCFSLI-----PNLSTSLFERVLLNGSYVSPHM 844
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEI 679
L +QYRMHP++SEFP FY G ++NG+T + R+ GI P P+FF+ G
Sbjct: 845 LDIQYRMHPAISEFPRTRFYNGKVKNGITADSRKMEGI------PENPVFFWNTNGNARE 898
Query: 680 SA--------SGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGVITPYEGQRAYIVNYMS 730
+ G +Y NR E + +++++ + L G+ IGV+TPY GQR I + +
Sbjct: 899 QSVRNFLREDRGYTYTNRDEVSYIQQVLRSLLIEKGIHRENIGVVTPYSGQRDLISSVLV 958
Query: 731 RNGALR---QQLYKEIEV--------------------ASVDSFQGREKDYIILSCVRSN 767
++ + ++L E+++ AS+D+FQGREKD++I+SCVRSN
Sbjct: 959 KDDIINPTNEELQVEVDIDDITNDSKPVSIHIVSGIMIASIDAFQGREKDFMIMSCVRSN 1018
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKE 816
IGFL D RRLNVALTRA+YG++++G+ L K LW + + +E
Sbjct: 1019 NQGTIGFLKDERRLNVALTRAKYGLIMIGDVNCLKKGDKLWKEYMQYLEE 1068
>gi|294657940|ref|XP_460248.2| DEHA2E21780p [Debaryomyces hansenii CBS767]
gi|199433066|emb|CAG88524.2| DEHA2E21780p [Debaryomyces hansenii CBS767]
Length = 1141
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 256/474 (54%), Gaps = 58/474 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQ-GQGQVLVCAPSNVAVDQ 449
N SQ A++SVL I+++QGPPG+GKT T I+ + +LV A SN+A+D
Sbjct: 674 FNDSQKVAIQSVLNNSITVLQGPPGSGKTSTIYEIILQLLDNLNTFPILVVAASNIAIDN 733
Query: 450 LAEKI-SATGLKVVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
+AEK+ G ++R+ + +E + P+ + LH++V D + + ++
Sbjct: 734 IAEKLLEKHGRSILRIVSNEKEREYNREHPLASICLHHKV--YDALPMAMKQTIDDMRRF 791
Query: 506 QGELSSSDEKKYKALKRATERE---ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQ 562
G S ++ K K L + E I+Q+ + T V G+ + + V++DE+TQ
Sbjct: 792 NGPKVSQNQYK-KLLTKQIELSDIFIAQAKVIFTTTVVAGGNQLKSVKKLPVVIMDEATQ 850
Query: 563 ATEPECLIPL-VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KPIR 619
++EP LIPL V G ++ V VGD QL + L+ SLFER++L G P
Sbjct: 851 SSEPTTLIPLSVPGVQKFVFVGDQKQLSSF-----SQVPNLSLSLFERVLLNGTYRTPHM 905
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMG--QE 677
L QYRMHP +SEFP N FY L++G+T +R GI P+ P++F+ G QE
Sbjct: 906 LDTQYRMHPMISEFPRNRFYGSLLKDGITAEDRILEGI------PSNPVYFWDTCGTAQE 959
Query: 678 EI------SASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIVNYMS 730
E G +Y NR+E + + K+V + +P S+IG+ITPY GQR I + +
Sbjct: 960 ERVRINFREDRGYTYSNRSEISYITKVVLNLIYDKGIPKSEIGIITPYRGQRDLISSILV 1019
Query: 731 RNGAL------------RQQLYKE-----------IEVASVDSFQGREKDYIILSCVRSN 767
+N + R +Y E I +AS+D+FQGREK+++I+SCVRSN
Sbjct: 1020 KNDLINPEKNDILVEVDRDDIYNESKPVTIHTVSEIMIASIDAFQGREKNFLIMSCVRSN 1079
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECL 820
+ IGFL D RRLNVALTRA+YG++I+G+ + L + PLW L H + H+ +
Sbjct: 1080 KESNIGFLGDERRLNVALTRAKYGLIIIGDVQCLREGNPLWREYLEHLQGHDSI 1133
>gi|241958926|ref|XP_002422182.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645527|emb|CAX40186.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1107
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 188/550 (34%), Positives = 280/550 (50%), Gaps = 77/550 (14%)
Query: 318 SQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQM-VR 376
SQ +P + H ++ + S R+ AMKT + LLG E Q+ +
Sbjct: 580 SQALPRTV-HVSNLKILPASQPVTRVLNAMKTIN------NASFTKMLLGKEPIKQIDFK 632
Query: 377 NTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQ-GQG 435
N L +F L N SQ V+SVL I+++QGPPGTGKT T I+ +
Sbjct: 633 NFL--KFQGENL---NESQKKGVQSVLNNSITVLQGPPGTGKTSTIYEIILQLLDSLNTY 687
Query: 436 QVLVCAPSNVAVDQLAEKI-SATGLKVVRLCAKSREA---VSSPVEHLTLHYQVRHLDTS 491
+LV A SN+A+D +AEK+ + G ++R+ A +E S P+ + LH+++
Sbjct: 688 PILVVAASNIAIDNIAEKLMTKHGKDILRITAGEKERDYNRSHPLASICLHHKMYD---- 743
Query: 492 EKSELHKLQQLKDEQGE-----LSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPR 546
+ K QQ+ DE + ++ KK+ + +I A V+ T V AG +
Sbjct: 744 --AMPMKYQQVLDEMKRGMAPSIGTTAYKKFAQERFFLSNQIVTQAKVVLATPVVAGGIK 801
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQS 605
N R V+IDE+TQ++EP LIPL L +++VLVGD QL + L+ S
Sbjct: 802 SLN-NVRVVIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQLSCFSLI-----PNLSLS 855
Query: 606 LFERLVLLGL--KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV 663
LFER++L G P L QYRMHP +SEFP FY G L++G+ + RQS G V
Sbjct: 856 LFERVLLNGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDASARQSEG------V 909
Query: 664 PNRPMFFYVQMGQEEISA--------SGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGV 714
+ P++F+ G + G +Y NR E +++++ T + GV P QIG+
Sbjct: 910 ISSPLYFWDTKGNAREQSVRNFLHEDGGYTYTNRDEIGYIQQVLRTLIITKGVNPEQIGI 969
Query: 715 ITPYEGQRAYIVNYMSRNGALR---QQLYKEIEV--------------------ASVDSF 751
ITPY GQR I + ++ + +Q+ E+++ AS+D+F
Sbjct: 970 ITPYSGQRDLISATLVKDDVINPSNEQMKTEVDIDDLKNDSKPVTIHIVSGIMIASIDAF 1029
Query: 752 QGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGL 810
QGREKDY+I+SCVRSN IGFL D RRLNVALTRA+YG++++G+ K L LW
Sbjct: 1030 QGREKDYMIMSCVRSNAKGVIGFLRDERRLNVALTRAKYGLIMVGDRKCLQNGDKLWKEY 1089
Query: 811 LTHYKEHECL 820
L + + +
Sbjct: 1090 LQYLDSKKAI 1099
>gi|190345609|gb|EDK37526.2| hypothetical protein PGUG_01624 [Meyerozyma guilliermondii ATCC
6260]
Length = 650
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 246/463 (53%), Gaps = 57/463 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQL 450
+N SQ AV+SVL I+++QGPPGTGKT T I+ +++ +LV A SN+A+D +
Sbjct: 186 INESQKVAVQSVLNNAITVLQGPPGTGKTSTIHEIILQLSELKTFPILVVAASNIAIDNI 245
Query: 451 AEKISAT-GLKVVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQ 506
AEK+ T G +++R+ + +E S P+ + LH++V D + + L+
Sbjct: 246 AEKLIKTHGREILRIVSNEKEKEYSRDHPLASICLHHKV--YDALPQQMKQTVDDLRRPF 303
Query: 507 GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDESTQATE 565
+S + KK + + A VI T V AG +L + + V++DE+TQ++E
Sbjct: 304 SNVSQNSYKKLLTQQIKLSDMFTAQAKVIFTTTVVAGGNQLKSVKKLPVVIMDEATQSSE 363
Query: 566 PECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG--LKPIRLQV 622
P LIPL + G + V VGD QL M L+ SLFER++L P L
Sbjct: 364 PTTLIPLSMPGVDKFVFVGDQRQLSSFSMV-----PNLSLSLFERVLLNNSYRNPHMLDT 418
Query: 623 QYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY----------V 672
QYRMHP++SEFP FY+ L++G+T ++R I P P++F+ V
Sbjct: 419 QYRMHPAISEFPRVKFYDELLKDGITADDRAMDNI------PENPVYFWDTKGKAREDRV 472
Query: 673 QMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNYMSR 731
+ G E G +Y N E V K++ + V S IGVITPY GQR I N + +
Sbjct: 473 RYGFRE--DRGYTYSNLNEIEYVTKVLMKLIYDKQVSKSDIGVITPYRGQRDLISNQLVK 530
Query: 732 NGAL------------RQQLYKE-----------IEVASVDSFQGREKDYIILSCVRSNE 768
N + R +Y E I +AS+D+FQGREK+++++SCVRSNE
Sbjct: 531 NDLINPEKEEVQVEVDRDDIYNESKPVTVHLVSGIMIASIDAFQGREKNFLVMSCVRSNE 590
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
+ IGFLND RRLNVALTRA+YG++++G+ L LW L
Sbjct: 591 ERKIGFLNDKRRLNVALTRAKYGLILIGDVSCLKGDELWREYL 633
>gi|308807118|ref|XP_003080870.1| RENT1_NEUCR Regulator of nonsense transcripts 1 homolog
ref|XP_323582.1| h (ISS) [Ostreococcus tauri]
gi|116059331|emb|CAL55038.1| RENT1_NEUCR Regulator of nonsense transcripts 1 homolog
ref|XP_323582.1| h (ISS) [Ostreococcus tauri]
Length = 1084
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 229/440 (52%), Gaps = 59/440 (13%)
Query: 386 PGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 445
P + +N SQ+ A+ + L I+LIQGPPGTGKT T+ A+V + G +L + SN+
Sbjct: 588 PAMQHMNQSQIDALMAALFNRITLIQGPPGTGKTHTAVALVQMWLRCGTSPILCTSDSNI 647
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
AVD L + ++ G++V R+ EAV + + Y + + D+
Sbjct: 648 AVDNLVDGLARAGVRVARIGRP--EAVRQDL----MPYMIESIAGI------------DQ 689
Query: 506 QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATE 565
S SD+ ++A+ A + A+VIC TC GAG L F F+ LIDE+TQATE
Sbjct: 690 DCRWSKSDQ--FQAINNALRK-----AEVICATCAGAGSDILERFSFQACLIDEATQATE 742
Query: 566 PECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYR 625
P +IPL G KQVVL+GD QL P I+ ++A AGL +SLFERL+ G++ L+VQYR
Sbjct: 743 PATIIPLTKGCKQVVLIGDQNQLPPTIISREAEAAGLGESLFERLIRSGIRTYMLKVQYR 802
Query: 626 MHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTS 685
MHP+++ FPS +FY+ + + P P P + + E A G
Sbjct: 803 MHPAIALFPSQTFYKVSCYRVHRRVSVVRQSV-LTGPFPQSP---WPRGEHREELAGGHE 858
Query: 686 YLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL------ 739
V+P IGV+TPY Q I + N R +
Sbjct: 859 ---------------------VLPGDIGVVTPYSAQARAIKKILRGNAPERTRFDAPADP 897
Query: 740 --YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 797
K +EVA+VD FQGREK+ II SC R+N + +GFL D RR+NV LTRA+ G++I+G+
Sbjct: 898 TSMKAVEVATVDGFQGREKEVIIFSCTRANMNGNVGFLADTRRVNVMLTRAKRGLIIVGH 957
Query: 798 PKVLSKQPL-WNGLLTHYKE 816
K L + + W G L +E
Sbjct: 958 MKTLQQDEIVWKGWLKWARE 977
>gi|448113163|ref|XP_004202282.1| Piso0_001771 [Millerozyma farinosa CBS 7064]
gi|359465271|emb|CCE88976.1| Piso0_001771 [Millerozyma farinosa CBS 7064]
Length = 1097
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 261/483 (54%), Gaps = 59/483 (12%)
Query: 375 VRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQ-G 433
++ + R + LN SQ AV+SVL I+++QGPPG+GKT T I+ +
Sbjct: 615 IKQIVFRNYVKYSRDSLNQSQKVAVQSVLNNSITVLQGPPGSGKTSTIFEIILQLLDNLN 674
Query: 434 QGQVLVCAPSNVAVDQLAEKISAT-GLKVVRLCAKSREAVSSPVEHL---TLHYQVRHLD 489
+LV A SN+A+D +AEK+ L ++R+ A +E + +L LH++V
Sbjct: 675 TFPILVVAASNIAIDNIAEKLMGNHALSILRIVANDKEKEYNRDHYLGSICLHHKVYDSL 734
Query: 490 TSEKSELHKLQQLKDEQGELSSSDEKKYKALK----RATEREISQSADVICCTCVGAGDP 545
+ E+ + LK+ + L S ++ YK L R ++ I+Q+ + T V G+
Sbjct: 735 SMYMKEI--MDNLKNGRSHLVSQNQ--YKKLLAEQIRLSDMFIAQAKVIFTTTVVAGGNQ 790
Query: 546 RLANFRFRQVLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
+ + V++DE+TQ++EP LIPL + G + V VGD QL + L+
Sbjct: 791 LKSVKKLPVVIMDEATQSSEPTTLIPLSMPGVDKFVFVGDQKQLSSF-----SQVPNLSL 845
Query: 605 SLFERLVLLGL--KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
SLFER++L G P L QYRMHP +SEFP FY G L++G+T ++R+ G+
Sbjct: 846 SLFERVLLNGTYKSPHMLDTQYRMHPLISEFPRKRFYGGLLKDGITADDRKMDGL----- 900
Query: 663 VPNRPMFFYVQMGQEEISA--------SGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIG 713
P P++F+ +G+ S G +Y+NR E ++++V + V S IG
Sbjct: 901 -PENPVYFWDTVGKCRESRIKVGFREDRGYTYVNRPEVDLIKQVVINLIYEHNVKRSDIG 959
Query: 714 VITPYEGQRAYIVNYMSRNGALR---QQLYKEIE--------------------VASVDS 750
VITPY GQR I + + ++ + ++LY E++ +AS+D+
Sbjct: 960 VITPYRGQRDLISSELVKDTLINPENKELYVEVDRDDIDNDTKPVTIHMVSDIMIASIDA 1019
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
FQGREK+++++SCVRSN +GFL+D RRLNVALTRA+YG+V++G+ L P+W+
Sbjct: 1020 FQGREKNFMVMSCVRSNAENKVGFLSDERRLNVALTRAKYGLVLVGDKTCLKSSPVWDEY 1079
Query: 811 LTH 813
++H
Sbjct: 1080 ISH 1082
>gi|320582034|gb|EFW96253.1| ATP-dependent RNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 832
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/464 (36%), Positives = 241/464 (51%), Gaps = 57/464 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQ 449
LN SQ A++S L I++++GPPG+GKT T ++ + Q +LV A SN+AVD
Sbjct: 368 LNESQSVALQSALNNQITILKGPPGSGKTSTIYEMILQLLDQLHYHPILVVAASNIAVDN 427
Query: 450 LAEKISATG----LKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSELHKLQQLKD 504
+AEK+ ++V+ + +S P+ + LH+++R L + + L L K
Sbjct: 428 IAEKMMKDHKDDIIRVLSMAKESEYNKDHPLADICLHHKIRDRLPSHAQETLRNLATGKA 487
Query: 505 EQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQA 563
+ +S + KK + R + A VI T V G P L + + V+IDE+TQ+
Sbjct: 488 HK--VSKNQFKKLIETNKDLSRLLIGQAKVIFSTTVAIGGPHLRDLAQLPVVIIDEATQS 545
Query: 564 TEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KPIRL 620
+EP LIPL ++VV VGD QL K L SLFER + G P+
Sbjct: 546 SEPSSLIPLAAPNVQKVVFVGDEAQLSSYTRVK-----SLEMSLFERTLKNGTYQSPLMF 600
Query: 621 QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEIS 680
QYRMHP +SEFP FYEG L++G+T +R+ +GI +P +FF+ G+ S
Sbjct: 601 DTQYRMHPEISEFPRMEFYEGKLKDGITAEDRKVAGISYP-------LFFWDHAGEARES 653
Query: 681 ---------ASGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGVITPYEGQRAYIVNYMS 730
+G +Y+NR E V +IV T + + PS+IGVITPY GQR I
Sbjct: 654 RVRSLRVGEETGYTYVNRGEVERVSRIVETLIVDKQIAPSRIGVITPYAGQRDLISASFK 713
Query: 731 RN-------GALRQQLYKE----------------IEVASVDSFQGREKDYIILSCVRSN 767
N ++ Q+ KE I VAS+D+FQGREKD+I++SCVRSN
Sbjct: 714 ENLLINPEKQEVQVQVDKEDVESDSKAATVHQVNGILVASIDAFQGREKDFIVMSCVRSN 773
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
+ IGFL D RRLNVALTRAR ++ +G+ L LW +
Sbjct: 774 SERNIGFLRDRRRLNVALTRARCSLLFVGDAHCLKGDQLWQSYI 817
>gi|428672356|gb|EKX73270.1| conserved hypothetical protein [Babesia equi]
Length = 1113
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 178/496 (35%), Positives = 261/496 (52%), Gaps = 50/496 (10%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFA---VDETSVSGYIYHH----LLGHEVEVQMVRNT 378
N+G VD ++ S++RM GA+ + + + TS Y Y + +L H+ + +T
Sbjct: 597 NYGV-VDIT-QTISYNRMMGALLSLSHSIIPITSTRAYTYTYEIRDILLHKASYRTFEDT 654
Query: 379 LPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAK-QGQGQV 437
+ + P L SQ A S + I+LIQGPPGTGKT + AI+ + Q ++
Sbjct: 655 --KLYSLPTPLSLTPSQTEACLSAVNNNITLIQGPPGTGKTHVACAIIDSWRRLHPQERI 712
Query: 438 LVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELH 497
L + SNVA D L E +SA G+ +R+ + S D E+
Sbjct: 713 LAVSDSNVAADTLIEALSACGIPALRIGSGS------------------EYDLQEEG--- 751
Query: 498 KLQQLKDEQGELSSSDEKKYK---ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
++ L Q L + KYK +L+ E ++ +I TC+G+G L N +F
Sbjct: 752 -IKDLSRYQAYLYLKSKHKYKEANSLRTVLFMEAIKNNKIIIATCIGSGSDLLDNLQFSF 810
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
V++DE Q+ EP L+ + G K +VL+GDH QL P I+ AR+GL++SL ERLV
Sbjct: 811 VIVDECAQSIEPANLVSIGRGCKSLVLIGDHKQLRPTIISNTVARSGLSKSLLERLVDEN 870
Query: 615 LKPI-RLQVQYRMHPSLSEFPSNSFYEGTLQNGVT--INERQSSGIDFPWPVPNRPM-FF 670
+ PI L Q RMHP+++EF + FY G LQN IN Q +G F WPV + F
Sbjct: 871 VVPICLLNSQRRMHPTIAEFSNLHFYNGMLQNEDVDDINRPQIAG--FKWPVAGYNLCFV 928
Query: 671 YVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS-QIGVITPYEGQRAYIV 726
+ G + GTS N+ E V I+ +FL +G + QIG++TPY+ Q+ +
Sbjct: 929 DISTGTPYNNFETPYGTSKYNQVEVNCVISILRSFLAAGDIEERQIGILTPYDAQKNVLQ 988
Query: 727 NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 786
N ++ + K I + SVD FQG+EKD II S VRSN ++ IGFL DPRR+NV LT
Sbjct: 989 NQVNLIQGINA---KAISIDSVDGFQGKEKDLIIFSAVRSNLNKDIGFLRDPRRMNVMLT 1045
Query: 787 RARYGIVILGNPKVLS 802
RAR G++I+G+ LS
Sbjct: 1046 RARRGLIIIGDLFTLS 1061
>gi|149238832|ref|XP_001525292.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450785|gb|EDK45041.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1176
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 171/477 (35%), Positives = 264/477 (55%), Gaps = 65/477 (13%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKT-VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A++SVL IS+++GPPGTGKT I+ + +LV A SN+A+D
Sbjct: 709 LNDSQRAAIQSVLNNKISVVRGPPGTGKTSAIYETIIQLLESLNTYPILVVAASNIAIDN 768
Query: 450 LAEKISAT-GLKVVRLCAKSREA---VSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
+AEK+ G ++R+ A +E S P+ + LH+++ + + K QQ++D+
Sbjct: 769 IAEKLLPKHGKLILRITASEKEKEYNKSHPLSSICLHHKIYN------ALPLKFQQVQDD 822
Query: 506 ----QGELSSSDEKKYKALK-RATEREISQSADVICCTCVGAGDPRLANF-RFRQVLIDE 559
G +S++ K + K + T+++++Q A VI T V AG P++ + + V++DE
Sbjct: 823 LRRGTGVVSANAYKNFMQEKFQITKQQVAQ-AKVILTTTVVAGGPQMKSVAKCPVVIMDE 881
Query: 560 STQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--K 616
+TQ++EP LIPL + GA + V VGD QL + L+ SLFER++L G
Sbjct: 882 ATQSSEPSTLIPLAVPGADKFVFVGDQKQLSCFSLI-----PSLSTSLFERVLLNGTYKA 936
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQ 676
P L QYRMHP++SEFP N FY G L++G+ + R GI P P++F+ G+
Sbjct: 937 PHMLDTQYRMHPAISEFPRNRFYGGELKDGIDASARAREGI------PLNPVYFWDTRGK 990
Query: 677 EEISA--------SGTSYLNRTEAANVEKIVTTF-LRSGVVPSQIGVITPYEGQRAYIVN 727
+ G +Y NR E + +++I+ L G+ IGVITPY GQR I +
Sbjct: 991 AREQSVLNYLREDRGYTYSNRDEISYIQQILRVLILEKGIKREDIGVITPYSGQRDLISS 1050
Query: 728 YMSRNGAL---RQQLYKEIEV--------------------ASVDSFQGREKDYIILSCV 764
+ ++ + R++L EI+V AS+D+FQGREKD++++SCV
Sbjct: 1051 TLVKDEVINPQREELKIEIDVDDIRNDSKPVNIHIVSGVMIASIDAFQGREKDFMVMSCV 1110
Query: 765 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS-KQPLWNGLLTHYKEHECL 820
RSN IGFL D RRLNVALTRARYG++++G+ K L LW + + +E + +
Sbjct: 1111 RSNTQGVIGFLRDERRLNVALTRARYGMIMVGDVKTLKLGDKLWKEYMEYLEERKLI 1167
>gi|146419989|ref|XP_001485953.1| hypothetical protein PGUG_01624 [Meyerozyma guilliermondii ATCC
6260]
Length = 650
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 244/463 (52%), Gaps = 57/463 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQL 450
+N SQ AV+SVL I+++QGPPGTGKT T I+ + + +LV A SN+A+D +
Sbjct: 186 INESQKVAVQSVLNNAITVLQGPPGTGKTSTIHEIILQLLELKTFPILVVAASNIAIDNI 245
Query: 451 AEKISAT-GLKVVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQ 506
AEK+ T G +++R+ + +E S P+ + LH++V D + + L+
Sbjct: 246 AEKLIKTHGREILRIVSNEKEKEYSRDHPLASICLHHKV--YDALPQQMKQTVDDLRRPF 303
Query: 507 GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDESTQATE 565
+S + KK + + A VI T V AG +L + V++DE+TQ++E
Sbjct: 304 SNVSQNLYKKLLTQQIKLSDMFTAQAKVIFTTTVVAGGNQLKLVKKLPVVIMDEATQSSE 363
Query: 566 PECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG--LKPIRLQV 622
P LIPL + G + V VGD QL M L+ SLFER++L P L
Sbjct: 364 PTTLIPLSMPGVDKFVFVGDQRQLSSFSMV-----PNLSLSLFERVLLNNSYRNPHMLDT 418
Query: 623 QYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY----------V 672
QYRMHP++SEFP FY+ L++G+T ++R I P P++F+ V
Sbjct: 419 QYRMHPAISEFPRVKFYDELLKDGITADDRAMDNI------PENPVYFWDTKGKAREDRV 472
Query: 673 QMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNYMSR 731
+ G E G +Y N E V K++ + V S IGVITPY GQR I N + +
Sbjct: 473 RYGFRE--DRGYTYSNLNEIEYVTKVLMKLIYDKQVSKSDIGVITPYRGQRDLISNQLVK 530
Query: 732 NGAL------------RQQLYKE-----------IEVASVDSFQGREKDYIILSCVRSNE 768
N + R +Y E I +AS+D+FQGREK+++++SCVRSNE
Sbjct: 531 NDLINPEKEEVQVEVDRDDIYNESKPVTVHLVSGIMIASIDAFQGREKNFLVMSCVRSNE 590
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
+ IGFLND RRLNVALTRA+YG++++G+ L LW L
Sbjct: 591 ERKIGFLNDKRRLNVALTRAKYGLILIGDVSCLKGDELWREYL 633
>gi|344303867|gb|EGW34116.1| hypothetical protein SPAPADRAFT_134155 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1098
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 273/513 (53%), Gaps = 62/513 (12%)
Query: 351 AVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLI 410
A+D S + +I LLG E +R + + F LN SQ A++S+ I+++
Sbjct: 597 AMDSLSNNNFI-KMLLGKEP----IRQIVFKNFLRYTRDTLNDSQKQAIQSIFNNAITVL 651
Query: 411 QGPPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQLAEKISATGLK-VVRLCAKS 468
QGPPGTGKT T I+ + +LV APSN+A+D +AEK+ T K ++R+ A
Sbjct: 652 QGPPGTGKTSTIFEIILQLLDSLNTYPILVVAPSNIAIDNIAEKLMPTHEKDLLRVVASE 711
Query: 469 REAVSSPVEHLT---LHYQVRH-LDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRAT 524
+E + HL+ LH+++ L T ++ + ++++ K G ++ KK+ +
Sbjct: 712 KEREYNKSHHLSSICLHHKIYEGLSTRSQTIVDEIKRGKPSVG---TTGYKKFVQERFQV 768
Query: 525 EREISQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQATEPECLIPL-VLGAKQVVLV 582
+++ A VI T V AG +L + + V++DE+TQ++EP LIPL V G + V V
Sbjct: 769 TKKMVAQAKVIFTTTVVAGSGQLKSISKCPVVIMDEATQSSEPTTLIPLSVPGVDKFVFV 828
Query: 583 GDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KPIRLQVQYRMHPSLSEFPSNSFYE 640
GD QL + GL+ SLFER++L G P L QYRMHP++SEF N FY
Sbjct: 829 GDQKQLNCFSLV-----PGLSLSLFERVLLNGTYKTPHMLDTQYRMHPTISEFARNRFYG 883
Query: 641 GTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISA--------SGTSYLNRTEA 692
G L++G+T +R+ GI P P++F+ G+ + G +Y N E
Sbjct: 884 GLLKDGITAEDRKMEGI------PENPVYFWNTNGKAREKSVHNWLREDRGFTYTNPGEI 937
Query: 693 ANVEKIVTTFL-RSGVVPSQIGVITPYEGQRAYIVNYMSRNGALR---QQLYKEIEV--- 745
V ++V + G+ IG+ITPY GQR I + + ++ + ++L E+++
Sbjct: 938 NYVIQVVKNLIIEKGIKREDIGIITPYSGQRDLISSILVKDDIINPQSEELRIEVDIDDI 997
Query: 746 -----------------ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
AS+D+FQGREK+++++SCVRSN IGFL D RRLNVALTRA
Sbjct: 998 KNDSKPVTIHIVSGILIASIDAFQGREKNFMVMSCVRSNVEGKIGFLRDERRLNVALTRA 1057
Query: 789 RYGIVILGNPKVL-SKQPLWNGLLTHYKEHECL 820
+YG+VI+G+ L S LWN + H K+ +
Sbjct: 1058 KYGMVIIGDENCLRSGDKLWNSYMDHLKDKNSI 1090
>gi|401625974|gb|EJS43946.1| ecm32p [Saccharomyces arboricola H-6]
Length = 1129
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 178/486 (36%), Positives = 255/486 (52%), Gaps = 75/486 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVD 448
+LN SQ AV+ VL I++++GPPGTGKT T ++ + ++ ++C A SN+A+D
Sbjct: 657 KLNRSQKIAVEHVLNNSITVLRGPPGTGKTSTIEEVIIQVIERFHAFPILCVAASNIAID 716
Query: 449 QLAEKISAT--GLKVVRLCAKSRE---AVSSPVEHLTLHYQV-RHLDTSEKSELHKLQQL 502
+AEKI +K++R+ +K +E P+ + LH V ++L S +L
Sbjct: 717 NIAEKILENRPQIKILRILSKKKEQQYGDDHPLGEICLHNIVYKNL-----SPDMRLVAN 771
Query: 503 KDEQGEL--SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI-DE 559
+ +GE+ S D K YK R T + +SQS +I T + AG L + V+I DE
Sbjct: 772 RARRGEIISKSEDTKFYKEKTRITNKVVSQS-QIIFTTNIAAGGRELKIIKECPVVIMDE 830
Query: 560 STQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--K 616
+TQ++E L+PL L G + V VGD QL + L SLFER++ G
Sbjct: 831 ATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSF-----SNIPQLEASLFERVLSNGTYKN 885
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY----- 671
P+ L QYRMHP +SEFP Y G L+NGVT E+Q + WP P+FFY
Sbjct: 886 PLMLDTQYRMHPKISEFPIKKIYNGELKNGVT--EKQKA-----WPGVEHPLFFYQCDLG 938
Query: 672 ----VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIV 726
V+ Q +I G +Y N+ E + KI+ + VP +IGVITPY QR +
Sbjct: 939 PESRVRSTQRDIV--GFTYENKHECEEIVKIIQILMLDKKVPLEEIGVITPYSAQRDLLS 996
Query: 727 NYMSRNGALR------QQLYKEIE-------------------------VASVDSFQGRE 755
+ +++N + QQ Y EIE VA+VDSFQG E
Sbjct: 997 DILTKNVVINPKQISMQQEYDEIELFNAAGSEAASSLQNNVINIVNGLHVATVDSFQGHE 1056
Query: 756 KDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHY 814
K +II SCVR+N IGFL D RRLNVALTRA++G++++GN VL K PLW +T+
Sbjct: 1057 KSFIIFSCVRNNAENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLKKGDPLWRDYVTYL 1116
Query: 815 KEHECL 820
+E +
Sbjct: 1117 EEQNAI 1122
>gi|256271315|gb|EEU06385.1| Ecm32p [Saccharomyces cerevisiae JAY291]
Length = 1121
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 178/487 (36%), Positives = 255/487 (52%), Gaps = 76/487 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVD 448
+LN SQ AV+ VL I+++QGPPGTGKT T I+ + ++ ++C A SN+A+D
Sbjct: 648 KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIEEIIIQVIERFHAFPILCVAASNIAID 707
Query: 449 QLAEKISAT--GLKVVRLCAKSREAVSS---PVEHLTLHYQV-RHLDTSEKSELHKLQQL 502
+AEKI +K++R+ +K +E S P+ + LH V ++L + +K ++
Sbjct: 708 NIAEKIMENRPQIKILRILSKKKEQQYSDDHPLGEICLHNIVYKNLSPDMQVVANKTRR- 766
Query: 503 KDEQGEL--SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI-DE 559
GE+ S D K YK R T + +SQS +I T + AG L + V+I DE
Sbjct: 767 ----GEMISKSEDTKFYKEKNRVTNKVVSQS-QIIFTTNIAAGGRELKVIKECPVVIMDE 821
Query: 560 STQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--K 616
+TQ++E L+PL L G + V VGD QL + L SLFER++ G
Sbjct: 822 ATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSF-----SNIPQLETSLFERVLSNGTYKN 876
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY----- 671
P+ L QYRMHP +SEFP Y G L++GVT ++ WP P+FFY
Sbjct: 877 PLMLDTQYRMHPKISEFPIKKIYNGELKDGVTDEQK-------AWPGVQHPLFFYQCDLG 929
Query: 672 ----VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIV 726
V+ Q +I G +Y N+ E + KI+ + VP +IGVITPY QR +
Sbjct: 930 PESRVRSTQRDIV--GFTYENKHECVEIVKIIQILMLDKKVPLEEIGVITPYSAQRDLLS 987
Query: 727 NYMSRNGALR------QQLYKEIE--------------------------VASVDSFQGR 754
+ +++N + QQ Y EIE VA+VDSFQG
Sbjct: 988 DILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGSLQNNVINIINGLHVATVDSFQGH 1047
Query: 755 EKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTH 813
EK +II SCVR+N IGFL D RRLNVALTRA++G++++GN VL K PLW +T+
Sbjct: 1048 EKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKGDPLWKDYITY 1107
Query: 814 YKEHECL 820
+E E +
Sbjct: 1108 LEEQEVI 1114
>gi|6321024|ref|NP_011103.1| Ecm32p [Saccharomyces cerevisiae S288c]
gi|418429|sp|P32644.1|ECM32_YEAST RecName: Full=Putative ATP-dependent RNA helicase ECM32; AltName:
Full=DNA helicase B; Short=Hcs B; AltName: Full=DNA
helicase III; AltName: Full=Extracellular mutant protein
32; AltName: Full=Helicase 1; Short=scHelI; AltName:
Full=Modulator of translation termination protein 1
gi|603417|gb|AAB64703.1| Yer176wp [Saccharomyces cerevisiae]
gi|285811811|tpg|DAA07839.1| TPA: Ecm32p [Saccharomyces cerevisiae S288c]
gi|392299881|gb|EIW10973.1| Ecm32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1121
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 178/487 (36%), Positives = 255/487 (52%), Gaps = 76/487 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVD 448
+LN SQ AV+ VL I+++QGPPGTGKT T I+ + ++ ++C A SN+A+D
Sbjct: 648 KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIEEIIIQVIERFHAFPILCVAASNIAID 707
Query: 449 QLAEKISAT--GLKVVRLCAKSREAVSS---PVEHLTLHYQV-RHLDTSEKSELHKLQQL 502
+AEKI +K++R+ +K +E S P+ + LH V ++L + +K ++
Sbjct: 708 NIAEKIMENRPQIKILRILSKKKEQQYSDDHPLGEICLHNIVYKNLSPDMQVVANKTRR- 766
Query: 503 KDEQGEL--SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI-DE 559
GE+ S D K YK R T + +SQS +I T + AG L + V+I DE
Sbjct: 767 ----GEMISKSEDTKFYKEKNRVTNKVVSQS-QIIFTTNIAAGGRELKVIKECPVVIMDE 821
Query: 560 STQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--K 616
+TQ++E L+PL L G + V VGD QL + L SLFER++ G
Sbjct: 822 ATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSF-----SNIPQLETSLFERVLSNGTYKN 876
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY----- 671
P+ L QYRMHP +SEFP Y G L++GVT ++ WP P+FFY
Sbjct: 877 PLMLDTQYRMHPKISEFPIKKIYNGELKDGVTDEQK-------AWPGVQHPLFFYQCDLG 929
Query: 672 ----VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIV 726
V+ Q +I G +Y N+ E + KI+ + VP +IGVITPY QR +
Sbjct: 930 PESRVRSTQRDIV--GFTYENKHECVEIVKIIQILMLDKKVPLEEIGVITPYSAQRDLLS 987
Query: 727 NYMSRNGALR------QQLYKEIE--------------------------VASVDSFQGR 754
+ +++N + QQ Y EIE VA+VDSFQG
Sbjct: 988 DILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGSLQNNVINIINGLHVATVDSFQGH 1047
Query: 755 EKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTH 813
EK +II SCVR+N IGFL D RRLNVALTRA++G++++GN VL K PLW +T+
Sbjct: 1048 EKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKGDPLWKDYITY 1107
Query: 814 YKEHECL 820
+E E +
Sbjct: 1108 LEEQEVI 1114
>gi|323337865|gb|EGA79105.1| Ecm32p [Saccharomyces cerevisiae Vin13]
Length = 842
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 255/487 (52%), Gaps = 76/487 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVD 448
+LN SQ AV+ VL I+++QGPPGTGKT T I+ + ++ ++C A SN+A+D
Sbjct: 369 KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIEEIIIQVIERFHAFPILCVAASNIAID 428
Query: 449 QLAEKISAT--GLKVVRLCAKSREAVSS---PVEHLTLHYQV-RHLDTSEKSELHKLQQL 502
+AEKI +K++R+ +K +E S P+ + LH V ++L + +K ++
Sbjct: 429 NIAEKIMENRPQIKILRILSKKKEQQYSDDHPLGEICLHNIVYKNLSPDMQVVANKTRR- 487
Query: 503 KDEQGEL--SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI-DE 559
GE+ S D K YK R T + +SQS +I T + AG L + V+I DE
Sbjct: 488 ----GEMISKSEDTKFYKEKNRVTNKVVSQS-QIIFTTNIAAGGRELKVIKECPVVIMDE 542
Query: 560 STQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--K 616
+TQ++E L+PL L G + V VGD QL + L SLFER++ G
Sbjct: 543 ATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSF-----SNIPQLETSLFERVLSNGTYKN 597
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY----- 671
P+ L QYRMHP +SEFP Y G L++GVT ++ WP P+FFY
Sbjct: 598 PLMLDTQYRMHPKISEFPIKKIYNGELKDGVTDEQK-------AWPGVQHPLFFYQCDLG 650
Query: 672 ----VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIV 726
V+ Q +I G +Y N+ E + KI+ + VP +IGVITPY QR +
Sbjct: 651 PESRVRSTQRDIV--GFTYENKHECVEIVKIIQILMLDKKVPLEEIGVITPYSAQRDLLS 708
Query: 727 NYMSRNGALR------QQLYKEIE--------------------------VASVDSFQGR 754
+ +++N + QQ Y EIE VA+VDSFQG
Sbjct: 709 DILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGSLQNNVINIINGLHVATVDSFQGH 768
Query: 755 EKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTH 813
EK +II SCVR+N IGFL D RRLNVALTRA++G++++GN VL K PLW +T+
Sbjct: 769 EKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKGDPLWKDYITY 828
Query: 814 YKEHECL 820
+E + +
Sbjct: 829 LEEQDVI 835
>gi|190405732|gb|EDV08999.1| DNA helicase I [Saccharomyces cerevisiae RM11-1a]
gi|259146106|emb|CAY79366.1| Ecm32p [Saccharomyces cerevisiae EC1118]
Length = 1121
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 255/487 (52%), Gaps = 76/487 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVD 448
+LN SQ AV+ VL I+++QGPPGTGKT T I+ + ++ ++C A SN+A+D
Sbjct: 648 KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIEEIIIQVIERFHAFPILCVAASNIAID 707
Query: 449 QLAEKISAT--GLKVVRLCAKSREAVSS---PVEHLTLHYQV-RHLDTSEKSELHKLQQL 502
+AEKI +K++R+ +K +E S P+ + LH V ++L + +K ++
Sbjct: 708 NIAEKIMENRPQIKILRILSKKKEQQYSDDHPLGEICLHNIVYKNLSPDMQVVANKTRR- 766
Query: 503 KDEQGEL--SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI-DE 559
GE+ S D K YK R T + +SQS +I T + AG L + V+I DE
Sbjct: 767 ----GEMISKSEDTKFYKEKNRVTNKVVSQSQ-IIFTTNIAAGGRELKVIKECPVVIMDE 821
Query: 560 STQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--K 616
+TQ++E L+PL L G + V VGD QL + L SLFER++ G
Sbjct: 822 ATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSF-----SNIPQLETSLFERVLSNGTYKN 876
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY----- 671
P+ L QYRMHP +SEFP Y G L++GVT ++ WP P+FFY
Sbjct: 877 PLMLDTQYRMHPKISEFPIKKIYNGELKDGVTDEQK-------AWPGVQHPLFFYQCDLG 929
Query: 672 ----VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIV 726
V+ Q +I G +Y N+ E + KI+ + VP +IGVITPY QR +
Sbjct: 930 PESRVRSTQRDIV--GFTYENKHECVEIVKIIQILMLDKKVPLEEIGVITPYSAQRDLLS 987
Query: 727 NYMSRNGALR------QQLYKEIE--------------------------VASVDSFQGR 754
+ +++N + QQ Y EIE VA+VDSFQG
Sbjct: 988 DILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGSLQNNVINIINGLHVATVDSFQGH 1047
Query: 755 EKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTH 813
EK +II SCVR+N IGFL D RRLNVALTRA++G++++GN VL K PLW +T+
Sbjct: 1048 EKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKGDPLWKDYITY 1107
Query: 814 YKEHECL 820
+E + +
Sbjct: 1108 LEEQDVI 1114
>gi|151944894|gb|EDN63153.1| DNA helicase [Saccharomyces cerevisiae YJM789]
Length = 1121
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 255/487 (52%), Gaps = 76/487 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVD 448
+LN SQ AV+ VL I+++QGPPGTGKT T I+ + ++ ++C A SN+A+D
Sbjct: 648 KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIEEIIIQVIERFHAFPILCVAASNIAID 707
Query: 449 QLAEKISAT--GLKVVRLCAKSREAVSS---PVEHLTLHYQV-RHLDTSEKSELHKLQQL 502
+AEKI +K++R+ +K +E S P+ + LH V ++L + +K ++
Sbjct: 708 NIAEKIMENRPQIKILRILSKKKEQQYSDDHPLGEICLHNIVYKNLSPDMQVVANKTRR- 766
Query: 503 KDEQGEL--SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI-DE 559
GE+ S D K YK R T + +SQS +I T + AG L + V+I DE
Sbjct: 767 ----GEMISKSEDTKFYKEKNRVTNKVVSQSQ-IIFTTNIAAGGRELKVIKECPVVIMDE 821
Query: 560 STQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--K 616
+TQ++E L+PL L G + V VGD QL + L SLFER++ G
Sbjct: 822 ATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSF-----SNIPQLETSLFERVLSNGTYKN 876
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY----- 671
P+ L QYRMHP +SEFP Y G L++GVT ++ WP P+FFY
Sbjct: 877 PLMLDTQYRMHPKISEFPIKKIYNGELKDGVTDEQK-------AWPGVQHPLFFYQCDLG 929
Query: 672 ----VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIV 726
V+ Q +I G +Y N+ E + KI+ + VP +IGVITPY QR +
Sbjct: 930 PESRVRSTQRDIV--GFTYENKHECVEIVKIIQILMLDKKVPLEEIGVITPYSAQRDLLS 987
Query: 727 NYMSRNGALR------QQLYKEIE--------------------------VASVDSFQGR 754
+ +++N + QQ Y EIE VA+VDSFQG
Sbjct: 988 DILTKNVVINPKQISMQQEYDEIELFNAGGSQGTAGSLQNNVINIINGLHVATVDSFQGH 1047
Query: 755 EKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTH 813
EK +II SCVR+N IGFL D RRLNVALTRA++G++++GN VL K PLW +T+
Sbjct: 1048 EKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKGDPLWKDYITY 1107
Query: 814 YKEHECL 820
+E + +
Sbjct: 1108 LEEQDVI 1114
>gi|440292088|gb|ELP85330.1| hypothetical protein EIN_085720 [Entamoeba invadens IP1]
Length = 1109
Score = 250 bits (638), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 251/499 (50%), Gaps = 80/499 (16%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMA--KQG-------QGQVLVC 440
+LN SQ AV L SLI GPPGTGK+ + A+V ++ KQ Q ++LV
Sbjct: 347 DLNDSQKNAVLQGLNCNCSLIVGPPGTGKSTVAVALVQNLMVYKQHFVDGIDIQQKILVS 406
Query: 441 APSNVAVDQLAEKISATGLKVVRLCAKSREA-VSSPVEHLTLHYQV-------------- 485
PSN AV+ L EK+ ++ VR+ ++ +S+ V H TL Y+V
Sbjct: 407 GPSNNAVNALCEKLIENDIECVRIVVDNKYTNMSTKVFHKTLMYKVYTFLLKTFQEVDDV 466
Query: 486 -----------------RHLDTSEKSELHKLQ--------------------QLKDE--- 505
+ L S+K +L L+ Q +D+
Sbjct: 467 NKINVRKFLDVFERKVQQFLTDSDKDKLASLELIYNTTPEIKRDFKTFNDFLQTQDDALW 526
Query: 506 ---QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQ 562
G +D++ + + + + I +V+C T +++ +F + DE++Q
Sbjct: 527 NKVSGGADFNDDQIIRKIMKNYQDVILNDCEVVCATL----SKQISGVKFWCTIGDEASQ 582
Query: 563 ATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQV 622
A EPE L + K+VVL+GD QL P ++ KA + GL S+FERL+ + L V
Sbjct: 583 ALEPETL-KAINEVKKVVLIGDFNQLPPTVVTTKAKQGGLDLSMFERLIQNKVFTTLLNV 641
Query: 623 QYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISAS 682
QYRMHP++S FPS +FY+G L +GVT +R +D +PV + P+ F G+E + +
Sbjct: 642 QYRMHPAISSFPSKNFYKGNLHDGVTEQQRSDPRLDHFFPVEHWPVVFIHHEGKESVGEN 701
Query: 683 GTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE 742
G SY N E V ++ G ++G+I+ Y Q I + + G
Sbjct: 702 GASYYNVNEVGIVTAVIGELKNRGFQDRELGIISTYNSQIQLISENIEKQG--------N 753
Query: 743 IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 802
I+ +SVDSFQG EK+ I+LSCVRSNE GIGF++D RR+NVALTRAR G+V++GN + LS
Sbjct: 754 IQTSSVDSFQGSEKEIIVLSCVRSNERLGIGFVSDHRRMNVALTRARKGLVVVGNMRTLS 813
Query: 803 KQPLWNGLLTHYKEHECLV 821
W L+ Y E +C+V
Sbjct: 814 TDQNWRKLILTYGEKQCVV 832
>gi|412987528|emb|CCO20363.1| predicted protein [Bathycoccus prasinos]
Length = 985
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 249/480 (51%), Gaps = 59/480 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV-----YHMAKQGQGQ--------- 436
LN SQ AVK+ +Q ++L +GPPGTGKT T A++ Y ++ G+
Sbjct: 508 LNPSQRKAVKAAMQNTLTLWRGPPGTGKTRTLVALIASVVNYANVQENGGKSDRGKSSNT 567
Query: 437 --------VLVCAPSNVAVDQ-----LAEKISATGLKVVRLCAKSREA---VSSPVEH-L 479
VL CA SNVAVD L EKI + + ++RL + +R + S + H +
Sbjct: 568 QASWRGPKVLACAASNVAVDNILDALLREKIDRS-MNILRLGSPARVQPWLLESTLSHKV 626
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
LH + + + S + + L+ ++ K+ + L R ++ ++DVI TC
Sbjct: 627 ALHPKGKEAN-SIRERFRGITSLE------AAKARKQAQQLDREAAIQVVNASDVILATC 679
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VGAGD LA+ FR +DE+ Q EP LIPL A VLVGD QL P ++ + A
Sbjct: 680 VGAGDDLLADRVFRYAFVDEAAQCVEPHTLIPLT-KALAGVLVGDTKQLPPTVVSRDAVA 738
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS-SGID 658
GL +SL ERL LLG++P L+ QYRMHP L+ F S FY+ L++ +ER + +G++
Sbjct: 739 IGLQRSLIERLELLGVEPYLLEEQYRMHPGLAAFSSVRFYDRRLKSVPKPSERVAPNGVN 798
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS--QIGVIT 716
WP P+ F G+E + G S N EA ++V L SG V + IG+I
Sbjct: 799 --WPSTMVPLAFVEVKGEEMRAPDGNSIFNVQEAEECVRVVQKLLLSGDVKNAGDIGIIA 856
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYK--------------EIEVASVDSFQGREKDYIILS 762
PY Q I +R +L E+E+ SVD FQGREK+ I+L
Sbjct: 857 PYAAQVRAISEEWNRKVTSDVKLKNTSVVEADNPESAKDELEIRSVDGFQGREKEVIVLC 916
Query: 763 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVE 822
VR+N +GF+ DPRRLNVA+TRA+ G+++LG+ LS LW L ++EC VE
Sbjct: 917 TVRNNRQNQLGFVADPRRLNVAITRAKRGLIVLGHRDTLSTDQLWQKWLQFVDKYECEVE 976
>gi|145349529|ref|XP_001419184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579415|gb|ABO97477.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 479
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 213/391 (54%), Gaps = 39/391 (9%)
Query: 437 VLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEL 496
+L + SN+AVD L + ++ G++V R+ V + Y + + ++
Sbjct: 10 ILCTSDSNIAVDNLVDGLARAGVRVARI------GRPEAVRQDLMPYMIESIAGIDQ--- 60
Query: 497 HKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVL 556
D + K +R+ + A+VIC TC GAG L + F+ L
Sbjct: 61 ----------------DCRWSKQQQRSAITNALRQAEVICATCAGAGSDILEKYSFQACL 104
Query: 557 IDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLK 616
IDE+TQATEP +IPL G KQVVL+GD QL P I+ ++A AGL +SLFER + G++
Sbjct: 105 IDEATQATEPATVIPLTKGCKQVVLIGDQNQLPPTIISREAEAAGLGESLFERFIRAGIR 164
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM-FFYVQMG 675
L+VQYRMHP+++ FPS +FY+G L +G ++R++ + F WPVP PM F V+ G
Sbjct: 165 TYMLKVQYRMHPAIALFPSKTFYKGELLSGTPPSQRRAP-VGFDWPVPAVPMAFVNVEEG 223
Query: 676 QEEISASGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGVITPYEGQRAYIVNYMSRNGA 734
E + G+S N E V IV + V+P IGV+TPY Q I + N
Sbjct: 224 AER--SDGSSQTNPAEIQRVVNIVKKLAGQHEVLPGDIGVVTPYSAQARAIKKILRGNAP 281
Query: 735 LRQQL--------YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 786
R + K +EVA+VD FQGREK+ I+ SC R+N + +GFL D RR+NV LT
Sbjct: 282 ERTRFDAPADPTSMKAVEVATVDGFQGREKEVIVFSCTRANMNGNVGFLADTRRVNVMLT 341
Query: 787 RARYGIVILGNPKVLSKQPL-WNGLLTHYKE 816
RA+ G++I+G+ K L + + W G L +E
Sbjct: 342 RAKRGLIIVGHMKTLQQDEIVWKGWLKWARE 372
>gi|281208251|gb|EFA82429.1| hypothetical protein PPL_04854 [Polysphondylium pallidum PN500]
Length = 799
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 248/462 (53%), Gaps = 48/462 (10%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVY---HMAKQ----------GQGQV 437
+N+SQ A+ S ++R +SLIQGPPGTGK+ T+ +V H+ ++ ++
Sbjct: 335 MNSSQRNAILSSVKRRVSLIQGPPGTGKSATAINLVRLLCHIKEKLSANDPGGVAASQKI 394
Query: 438 LVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTL-HYQVRHLDTSEKSEL 496
LV + +N VD L + + +KV+RL S +V + + TL H+ + EKS
Sbjct: 395 LVTSYTNTGVDNLLDGLLKYNVKVLRLGHTS--SVRPDLLNATLDHHLSEAIKQYEKSPN 452
Query: 497 HKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVL 556
+ + + ++R T+ ++ +VIC TC+ +G P L N RF V+
Sbjct: 453 YNPANIAN---------------IERDTKSKLLSQVNVICTTCIASGHPILTNERFSIVI 497
Query: 557 IDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLK 616
+DE++QATEP L+PL+ ++Q+ L GD QL P I K+A GL+ LF+RL +
Sbjct: 498 VDEASQATEPAILVPLLKQSEQLFLFGDQNQLSPTIFTKEAEDGGLSIGLFQRLA-NDIT 556
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQ 676
P L+ QYRMH L EFP+ Y+G L+ G+ +RQ F WP P+ F +G+
Sbjct: 557 PFLLEEQYRMHSKLLEFPNKYIYDGKLKTGIDDKDRQIPR-GFDWPREQCPIAFVNVVGK 615
Query: 677 EEISASGTSYLNRTEAANVEKIVTTFLRSG--VVPSQIGVITPYEGQRAYIVNYMSRNGA 734
E+I + SY+N EA + +I+ ++ + G+ITPY Q I N
Sbjct: 616 EDI--NNYSYMNMPEAKEIVRILKAMVKENQDLTTDSFGIITPYSSQAKLICNL------ 667
Query: 735 LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 794
LR K VA+VDSFQGREK+ I++S VRSN +GFLND RRLNV+LTRA+ G++I
Sbjct: 668 LRPDFRKLPTVATVDSFQGREKEIILVSTVRSNLGGRVGFLNDWRRLNVSLTRAKRGMII 727
Query: 795 LGNPKVLSKQPL--WNGLLTHYKEHECLV---EGPLNNLKQS 831
+GN + L P WN + + +V P+ N++ S
Sbjct: 728 VGNKQTLESCPCEKWNQYIQWCTDESLIVLPQTQPIVNIESS 769
>gi|349577838|dbj|GAA23006.1| K7_Ecm32p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1121
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 255/487 (52%), Gaps = 76/487 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVD 448
+LN SQ AV+ VL I+++QGPPGTGKT T I+ + ++ ++C A SN+A+D
Sbjct: 648 KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIEEIIIQVIERFHAFPILCVAASNIAID 707
Query: 449 QLAEKISAT--GLKVVRLCAKSREAVSS---PVEHLTLHYQV-RHLDTSEKSELHKLQQL 502
+AEKI +K++R+ +K +E S P+ + LH V ++L + ++ ++
Sbjct: 708 NIAEKIMENRPQIKILRILSKKKEQQYSDDHPLGEICLHNIVYKNLSPDMQVVANRTRR- 766
Query: 503 KDEQGEL--SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI-DE 559
GE+ S D K YK R T + +SQS +I T + AG L + V+I DE
Sbjct: 767 ----GEMISKSEDTKFYKEKNRITNKVVSQS-QIIFTTNIAAGGRELKVIKECPVVIMDE 821
Query: 560 STQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--K 616
+TQ++E L+PL L G + V VGD QL + L SLFER++ G
Sbjct: 822 ATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSF-----SNIPQLETSLFERVLSNGTYKN 876
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY----- 671
P+ L QYRMHP +SEFP Y G L++GVT ++ WP P+FFY
Sbjct: 877 PLMLDTQYRMHPKISEFPIKKIYNGELKDGVTDEQK-------AWPGVQHPLFFYQCDLG 929
Query: 672 ----VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIV 726
V+ Q +I G +Y N+ E + KI+ + VP +IGVITPY QR +
Sbjct: 930 PESRVRSTQRDIV--GFTYENKHECVEIVKIIQILMLDKKVPLEEIGVITPYSAQRDLLS 987
Query: 727 NYMSRNGALR------QQLYKEIE--------------------------VASVDSFQGR 754
+ +++N + QQ Y EIE VA+VDSFQG
Sbjct: 988 DILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGSLQNNVINIINGLHVATVDSFQGH 1047
Query: 755 EKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTH 813
EK +II SCVR+N IGFL D RRLNVALTRA++G++++GN VL K PLW +T+
Sbjct: 1048 EKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKGDPLWKDYITY 1107
Query: 814 YKEHECL 820
+E + +
Sbjct: 1108 LEEQDVI 1114
>gi|444320685|ref|XP_004180999.1| hypothetical protein TBLA_0E04260 [Tetrapisispora blattae CBS 6284]
gi|387514042|emb|CCH61480.1| hypothetical protein TBLA_0E04260 [Tetrapisispora blattae CBS 6284]
Length = 1202
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 171/490 (34%), Positives = 263/490 (53%), Gaps = 72/490 (14%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQG-QVLVCAPSNVAVDQ 449
N SQ A++ VL I+++QGPPGTGKT T I+ M K +LV A SN+A+D
Sbjct: 729 FNESQKAAIQHVLNNDITIVQGPPGTGKTSTIEEIILQMIKNFNSFPILVVAASNIAIDN 788
Query: 450 LAEK-ISATGLKVVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
+AEK + + ++++R+ ++++E+ + P+ + LH+ V D ++ L+ L +LK+
Sbjct: 789 IAEKFVKNSNIRILRIVSEAKESEYNKEHPLAPICLHHIV--YDQLPENALNTLSKLKN- 845
Query: 506 QGELSSSDEKKYKALKRA----TEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDES 560
G SS +K+Y L ++R +SQ A +I T + AG L + V++DES
Sbjct: 846 -GLFSSISKKEYNKLSDIKNGISDRYVSQ-AQIIFTTNIAAGGRSLKGLKELPVVIMDES 903
Query: 561 TQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG--LKP 617
TQ++E L+PL L G + V VGD QL + L SLFER++L G KP
Sbjct: 904 TQSSEAATLVPLSLPGIRTFVFVGDEKQLSTF-----SNVPQLEMSLFERVLLNGRYAKP 958
Query: 618 IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY--VQMG 675
L Q+RMHP++SEFP +FY G L++G+T +R GI++ P++FY + G
Sbjct: 959 HMLDTQFRMHPTISEFPIKTFYNGELKDGITPQDRYIEGINY-------PLYFYDVYKGG 1011
Query: 676 QEEI-----SASGTSYLNRTEAANVEKIVTTF-LRSGVVPSQIGVITPYEGQRAYIVNYM 729
+E++ SG +Y NR EA + K++ L + +I +ITPY QR I + +
Sbjct: 1012 EEKVFHTQNGISGFTYTNRHEAKEIVKVLYKLILDKKIQRKEISIITPYSAQRDLISDIL 1071
Query: 730 SRNGALRQQ--------------------------------LYKEIEVASVDSFQGREKD 757
+ + + Q + I VA++DSFQG E +
Sbjct: 1072 AEDLLINPQSLSIIRDVDEVDLLNNKNNSSLNNESRKKTINIINGIYVATIDSFQGHENN 1131
Query: 758 YIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKE 816
+II SCVR+N + IGFLND RRLNVALTRAR G++++GN +VLS LW + Y E
Sbjct: 1132 FIIFSCVRNNPEKRIGFLNDRRRLNVALTRARNGLIMIGNSRVLSSGGSLWRSYI-KYIE 1190
Query: 817 HECLVEGPLN 826
+ L+ L+
Sbjct: 1191 RKKLIFKSLD 1200
>gi|207345778|gb|EDZ72487.1| YER176Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 687
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 176/486 (36%), Positives = 253/486 (52%), Gaps = 74/486 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVD 448
+LN SQ AV+ VL I+++QGPPGTGKT T I+ + ++ ++C A SN+A+D
Sbjct: 214 KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIEEIIIQVIERFHAFPILCVAASNIAID 273
Query: 449 QLAEKISAT--GLKVVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLK 503
+AEKI +K++R+ +K +E S P+ + LH ++ S ++ K
Sbjct: 274 NIAEKIMENRPQIKILRILSKKKEQQYSDDHPLGEICLH----NIVYKNLSPDMQVVANK 329
Query: 504 DEQGEL--SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI-DES 560
+GE+ S D K YK R T + +SQS +I T + AG L + V+I DE+
Sbjct: 330 TRRGEMISKSEDTKFYKEKNRVTNKVVSQS-QIIFTTNIAAGGRELKVIKECPVVIMDEA 388
Query: 561 TQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KP 617
TQ++E L+PL L G + V VGD QL + L SLFER++ G P
Sbjct: 389 TQSSEASTLVPLSLPGIRNFVFVGDEKQLSSF-----SNIPQLETSLFERVLSNGTYKNP 443
Query: 618 IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY------ 671
+ L QYRMHP +SEFP Y G L++GVT ++ WP P+FFY
Sbjct: 444 LMLDTQYRMHPKISEFPIKKIYNGELKDGVTDEQK-------AWPGVQHPLFFYQCDLGP 496
Query: 672 ---VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIVN 727
V+ Q +I G +Y N+ E + KI+ + VP +IGVITPY QR + +
Sbjct: 497 ESRVRSTQRDIV--GFTYENKHECVEIVKIIQILMLDKKVPLEEIGVITPYSAQRDLLSD 554
Query: 728 YMSRNGALR------QQLYKEIE--------------------------VASVDSFQGRE 755
+++N + QQ Y EIE VA+VDSFQG E
Sbjct: 555 ILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGSLQNNVINIINGLHVATVDSFQGHE 614
Query: 756 KDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHY 814
K +II SCVR+N IGFL D RRLNVALTRA++G++++GN VL K PLW +T+
Sbjct: 615 KSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKGDPLWKDYITYL 674
Query: 815 KEHECL 820
+E + +
Sbjct: 675 EEQDVI 680
>gi|220931020|ref|YP_002507928.1| putative DNA helicase [Halothermothrix orenii H 168]
gi|219992330|gb|ACL68933.1| putative DNA helicase [Halothermothrix orenii H 168]
Length = 754
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 193/564 (34%), Positives = 291/564 (51%), Gaps = 101/564 (17%)
Query: 328 GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPG 387
G +D +F RM A+ + ++ G I + LLG + + RR P
Sbjct: 212 GLRMDLYVNDITFQRMLSALDQIRRAKGNL-GRIRNILLG------IKKPGWYRR--EPE 262
Query: 388 LPE-----LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
+ E LN SQ AVK +Q R I LIQGPPGTGKTVT+ +V K G+ +VL A
Sbjct: 263 IIEWVNDDLNLSQKNAVKKAIQARDIYLIQGPPGTGKTVTAVEVVNQAVKSGK-RVLATA 321
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-------RHLDTSEK- 493
SNVAVD L E++ GL V+R+ R V+ + TL Y+V + L+ EK
Sbjct: 322 ESNVAVDNLVERLVGYGLNVIRVGHPFR--VTPLLREHTLDYRVLDHPLYKKALNLREKA 379
Query: 494 SELHKLQQ------------LKDEQGELSSSDEKKYKAL--KRATE-------------- 525
S+L + Q+ + D+Q +++ + ++ + KR E
Sbjct: 380 SDLKEKQEGLTSPSGQWRRGMSDKQIRINARKNRSFRGVPAKRIKEMAKWLGIQEEINQL 439
Query: 526 ------------REISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLV 573
R++ SADV+C T AG L + F V+IDE+TQATEP LIPL+
Sbjct: 440 FDKINSLEERAVRDLLNSADVVCSTNSTAGSELLEGWEFELVVIDEATQATEPGALIPLI 499
Query: 574 LGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRL-QVQYRMHPSLS 631
A++ VL+GDH QL P ++ +KA + GL++SLFERL L G K L ++QYRM+ +
Sbjct: 500 -KAQKAVLIGDHKQLPPTVLSQKADKQGLSKSLFERLYSLYGDKYCSLLEIQYRMNDLIM 558
Query: 632 EFPSNSFYEGTLQN------------GVTINERQ---SSGIDFPWPVPNRPMFFYVQMGQ 676
EF ++ FY G L++ G+ I+E + G D P+ P+ F
Sbjct: 559 EFSNSHFYGGRLKSAPEVRNHTLRDLGIEISEGKCFTEKGFD-----PDNPVVFLDTSNM 613
Query: 677 EEISAS---GTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNG 733
E S SY N EA V +V L+ G+ I VITPY+ Q ++N++SR
Sbjct: 614 EARERSLPNSDSYDNPVEAEIVLDLVGEALKLGLEQRHIAVITPYKDQ-VDLLNHLSR-- 670
Query: 734 ALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV 793
++ +E+ +VD FQGREK+ +++S VRSN+H+ IGFL D RRLNVA+TR + ++
Sbjct: 671 ------FENLEINTVDGFQGREKEVVMISLVRSNKHRNIGFLRDLRRLNVAITRPKRKLI 724
Query: 794 ILGNPKVLSKQPLWNGLLTHYKEH 817
I+G+ +S +++ L+ + +E+
Sbjct: 725 IIGDSNTISGHEVYSSLVDYVREN 748
>gi|448527318|ref|XP_003869468.1| Ecm32 protein [Candida orthopsilosis Co 90-125]
gi|380353821|emb|CCG23333.1| Ecm32 protein [Candida orthopsilosis]
Length = 1103
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 259/474 (54%), Gaps = 55/474 (11%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKT-VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A++SVL IS++QGPPGTGKT V ++ + +LV A SN+A+D
Sbjct: 638 LNDSQKAAIQSVLNNKISVVQGPPGTGKTSVIYETLIQLLESLNTYPILVVAASNIAIDN 697
Query: 450 LAEKI-SATGLKVVRLCAKSREAV---SSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
+AEK+ S G ++R+ A S+E + P+ + LH+++ + + ++ L+
Sbjct: 698 IAEKLLSKHGKSILRITASSKEKEYNRAHPLASICLHHKIYDAMSMKHQQVQ--NDLRRG 755
Query: 506 QGELSSSDEKKYKALK-RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT 564
G +S + K++ K + T+++++QS ++ T V G+ + + V++DE+TQ++
Sbjct: 756 TGVISGNAYKQFMQEKFQLTKQQVAQSKVILTTTVVAGGNQLKSLAKCPVVIMDEATQSS 815
Query: 565 EPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KPIRLQ 621
EP LIPL + A++ V VGD QL + LA SLFER++L P L
Sbjct: 816 EPSTLIPLAVPCAEKFVFVGDQKQLSCFSLI-----PNLATSLFERVLLNATYKSPHMLD 870
Query: 622 VQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISA 681
QYRMHP++SEFP FY G L++G+ + R+ +GI P F+ + E S
Sbjct: 871 TQYRMHPAISEFPRTKFYNGELKDGIDADARRINGI------PESLYFWDTKSKAREKSV 924
Query: 682 -------SGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGVITPYEGQRAYIVNYMSRNG 733
G ++ N E + V++++ T + G+ IGVITPY GQR I + + ++
Sbjct: 925 RNLLREDGGYTFTNHEEVSYVQQVLKTLIVEKGISRDNIGVITPYSGQRDLISSILVKDD 984
Query: 734 ALR---QQLYKEIEV--------------------ASVDSFQGREKDYIILSCVRSNEHQ 770
+ + L EI++ AS+D+FQGREKD++I+SCVRSN+
Sbjct: 985 VINPANEDLQIEIDIDDITNDSKPVNIHIVSGIMIASIDAFQGREKDFMIMSCVRSNKQG 1044
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLVEG 823
IGFL D RRLNVALTRA+YG++++G+ + L K LW + Y E + L+ G
Sbjct: 1045 TIGFLKDERRLNVALTRAKYGLIMVGDVECLKKGDKLWKEYM-EYLEKKKLIHG 1097
>gi|365760991|gb|EHN02669.1| Ecm32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1101
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 177/485 (36%), Positives = 252/485 (51%), Gaps = 73/485 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVD 448
+LN SQ AV+ VL I+++QGPPGTGKT T I+ + ++ ++C A SN+A+D
Sbjct: 629 KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIEEIIIQVIERFHAFPVLCVAASNIAID 688
Query: 449 QLAEKISAT--GLKVVRLCAKSRE---AVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLK 503
+AEKI +K++R+ +K +E P+ + LH + H + S ++ K
Sbjct: 689 NIAEKIMENRPQIKILRILSKRKEQQYGDDHPLGEICLH-NIVHKNLSPD---MRVVANK 744
Query: 504 DEQGEL--SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI-DES 560
+GE+ S D K YK R T + +SQS +I T + AG L + V+I DE+
Sbjct: 745 TRRGEVISKSEDTKFYKERNRITNKVVSQSQ-IIFTTNIAAGGRELKVIKECPVVIMDEA 803
Query: 561 TQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR 619
TQ++E L+PL L G + V VGD QL + L SLFER++ G R
Sbjct: 804 TQSSEASTLVPLSLPGIRNFVFVGDEKQLSSF-----SNIPQLETSLFERVLSNGTYKNR 858
Query: 620 LQV--QYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY------ 671
L + QYRMHP +SEFP Y G L++GVT G WP P+FFY
Sbjct: 859 LMLDTQYRMHPKISEFPIKKIYNGELRDGVT-------GKQKGWPGVEHPLFFYHCDLGS 911
Query: 672 ---VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIVN 727
V+ Q +I G +Y N+ E + KIV L VP +IG++TPY QR + N
Sbjct: 912 ESRVRSAQRDIV--GFTYENKHECGEIVKIVQILLLDKKVPLEEIGIVTPYSAQRDLLSN 969
Query: 728 YMSRNGALR------QQLYKEIE-------------------------VASVDSFQGREK 756
+++N + +Q Y EIE VA+VDSFQG EK
Sbjct: 970 ILTKNTVINPRQISMEQEYDEIELFNAADSQGASSLQNNVINIINGLHVATVDSFQGHEK 1029
Query: 757 DYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYK 815
+II SCVR+N IGFL D RRLNVALTRA++G++++GN VL K PLW +T+ +
Sbjct: 1030 SFIIFSCVRNNAENKIGFLRDKRRLNVALTRAKHGLIVVGNKDVLKKGDPLWRDYVTYLE 1089
Query: 816 EHECL 820
E + +
Sbjct: 1090 EQDAI 1094
>gi|448115785|ref|XP_004202904.1| Piso0_001771 [Millerozyma farinosa CBS 7064]
gi|359383772|emb|CCE79688.1| Piso0_001771 [Millerozyma farinosa CBS 7064]
Length = 1096
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 259/483 (53%), Gaps = 59/483 (12%)
Query: 375 VRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
++ + R + LN SQ AV+SVL I+++QGPPG+GKT T I+ +
Sbjct: 614 IKQIVFRNYVKYSRDSLNQSQKVAVQSVLNNSITVLQGPPGSGKTSTIFEIILQLLDNLN 673
Query: 435 GQ-VLVCAPSNVAVDQLAEKISAT-GLKVVRLCAKSREAVSSPVEHL---TLHYQVRHLD 489
+LV A SN+A+D +AEK+ L ++R+ A +E + +L LH++V
Sbjct: 674 TYPILVVAASNIAIDNIAEKLMGNHALSILRIVANDKEKEYNRDHYLGSICLHHKVYDSL 733
Query: 490 TSEKSELHKLQQLKDEQGELSSSDEKKYKALK----RATEREISQSADVICCTCVGAGDP 545
+ E+ + LK+ + L S ++ YK L R ++ I+Q+ + T V G+
Sbjct: 734 SLYMKEI--MDNLKNGRSHLVSQNQ--YKKLLAEQIRLSDMFIAQAKVIFTTTVVAGGNQ 789
Query: 546 RLANFRFRQVLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
+ + V++DE+TQ++EP LIPL + G + V VGD QL + L+
Sbjct: 790 LKSVKKLPVVIMDEATQSSEPTTLIPLSMPGVDKFVFVGDQKQLSSF-----SQVPNLSL 844
Query: 605 SLFERLVLLGL--KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
SLFER++L G P L QYRMHP +SEFP FY G L++G+T ++R+ G+
Sbjct: 845 SLFERVLLNGTYKSPHMLDTQYRMHPLISEFPRKRFYGGLLKDGITADDRKMDGL----- 899
Query: 663 VPNRPMFFYVQMGQEEISA--------SGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIG 713
P P++F+ G+ S G +Y+N+ E ++++V + V S IG
Sbjct: 900 -PENPVYFWDTAGKCRESRIKVGFREDRGFTYVNKPEVDLIKQVVINLIYEHNVKRSDIG 958
Query: 714 VITPYEGQRAYIVNYMSRNGALR---QQLYKEIE--------------------VASVDS 750
VITPY GQR I + + ++ + ++LY E++ +AS+D+
Sbjct: 959 VITPYRGQRDLISSELVKDTLVNPENKELYVEVDRDDIDNDAKPVTIHMVSDIMIASIDA 1018
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
FQGREK+++++SCVRSN +GFL+D RRLNVALTRA++G+V+ G+ L P+W+
Sbjct: 1019 FQGREKNFMVMSCVRSNTENKVGFLSDERRLNVALTRAKFGLVLAGDKTCLKSSPVWDEY 1078
Query: 811 LTH 813
+++
Sbjct: 1079 ISY 1081
>gi|156087819|ref|XP_001611316.1| regulator of nonsense transcripts [Babesia bovis T2Bo]
gi|154798570|gb|EDO07748.1| regulator of nonsense transcripts, putative [Babesia bovis]
Length = 1086
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 229/415 (55%), Gaps = 33/415 (7%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQL 450
L +Q A + L P++LIQGPPGTGKT + AI+ + ++ ++L A SNVA D L
Sbjct: 643 LTDTQAAACRYALSHPLTLIQGPPGTGKTQVACAIIDCLIRKTSEKILAVADSNVAADNL 702
Query: 451 AEKISATGLKVVRLCAKSREAV-SSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGEL 509
E + G++ +R+ S + ++ T + + R+L +S +HK
Sbjct: 703 IEGLDRRGIQALRVGFGSESLLQEESLKRCTRYGRYRYL---RESGMHK----------- 748
Query: 510 SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECL 569
+ +++ + ++ VI TCVG+G+ LA + F V+IDE Q+ EP L
Sbjct: 749 ------EANSMRVLMILDAIKTHQVIIATCVGSGNDVLAGYSFPYVIIDECAQSIEPSNL 802
Query: 570 IPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQYRMHP 628
IP+ G +Q+VL+GDH QL P I+ +AA GL+ SL E LV + + L VQ RMHP
Sbjct: 803 IPIGKGCRQLVLIGDHMQLRPTIISTEAASEGLSSSLLENLVNANVGKVHLLDVQRRMHP 862
Query: 629 SLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQM-----GQEEISASG 683
S+SEFP+N FY+G + + + N R F WP P + F GQ E S G
Sbjct: 863 SISEFPNNQFYKGLITDAIEENSRNPIK-GFEWPSPAYNIAFIDASSGGPNGQFE-SVVG 920
Query: 684 TSYLNRTEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE 742
TS N E + ++ +FL +G V S IG++T Y+ Q+ + +++ + Q
Sbjct: 921 TSRSNALEVEIILMLLKSFLDAGDVRESDIGILTAYDAQKWQLRRKVNQMFGINAQ---A 977
Query: 743 IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 797
IE+ SVD FQG+EK+ I+ S VRSN H+ IGFL DPRR+NV LTRAR G++++ +
Sbjct: 978 IEIDSVDGFQGKEKELILFSGVRSNNHKDIGFLKDPRRMNVMLTRARRGLIVVAD 1032
>gi|291234059|ref|XP_002736968.1| PREDICTED: regulator of nonsense transcripts 1-like [Saccoglossus
kowalevskii]
Length = 3483
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 272/550 (49%), Gaps = 71/550 (12%)
Query: 330 SVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFG--APG 387
+V+ + K++S RM+ A++ A + S + + +G + ++ + L + P
Sbjct: 2942 TVEVIPKASSDSRMENAIRNLA----NTSELVKNICMGKRIIMEENKQALLVKDTEIKPS 2997
Query: 388 LP--ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVY---HMAKQGQG---QVLV 439
P +LN Q VK L+ P +LIQGPPGTGKTVT I Y H+ KQ G Q+L
Sbjct: 2998 HPFYKLNRVQDDVVKKALREPFTLIQGPPGTGKTVTGVHITYWFNHLNKQMSGAKKQLLY 3057
Query: 440 CAPSNVAVDQLAEKISAT-----GLKVVRLCAKS-----------------REAVSSPVE 477
C PSN ++D + + G+K+VR+ + + R V P E
Sbjct: 3058 CGPSNKSIDVVTSYLKRLPLGDFGMKIVRVYSDNIEQKEFPIPGTPQQRSKRRDVIMPPE 3117
Query: 478 H--LTLHYQVRHLDTSEKSELHKLQQL-KDEQGELSSSDEKKYKALKRATEREISQSADV 534
H ++LH+ +R E+ + +L KD+ + D KYK+ E E + DV
Sbjct: 3118 HQCVSLHHLIRQKSNQFSEEIREFDRLFKDQNYSPTREDIGKYKSTVSKAEAEELTNCDV 3177
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAK-QVVLVGDHCQLGPVIM 593
I CTC AG RLA+ +Q ++DE TEPE ++PLV QVVL+GDH QL P++
Sbjct: 3178 ILCTCSTAGSRRLADCNIQQCIVDECGMCTEPEVVVPLVASKPLQVVLIGDHRQLRPIVT 3237
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
A + G+ SL E+ +K + L QYRMH + +FPS FY G L G + +R
Sbjct: 3238 ESMAKKLGMEISLLEQ---YQMKAVMLTDQYRMHQGICKFPSTQFYNGQLVTGECVRKR- 3293
Query: 654 SSGIDFPWPVPNRPMFFYVQMGQEE---ISASGTSYLNRTEAANVEKIV----TTFLRSG 706
G++ WP + P F +G+EE +S + +++ + VE++V T +R
Sbjct: 3294 PQGLNI-WPNQDTPTVFCHIIGKEESLTVSTAEGGEESKSNSLEVEQVVRIAITLVVRHK 3352
Query: 707 VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS 766
V I +++ Y Q A I + G Y EI V++V QG E DY++ S VRS
Sbjct: 3353 VKSRSIIILSQYRAQCAEITKRLEEKG------YPEINVSTVIISQGSEWDYVLFSTVRS 3406
Query: 767 NEHQGI-------------GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
I GF+ D ++NVA+TRA+ G++++GN +L +W + H
Sbjct: 3407 IPKNQIEEKPSRGWLLNHLGFITDEHQINVAITRAKLGLILVGNRDLLQSHSMWKAFVNH 3466
Query: 814 YKEHECLVEG 823
Y+++ C+V+
Sbjct: 3467 YQQNRCIVDA 3476
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 200/467 (42%), Gaps = 92/467 (19%)
Query: 385 APGLP------------ELNASQVFAVKSVLQ-----RPISLIQGPPGTGKTVTSAAIVY 427
PGLP E+N +Q+ AV S+L P +I GP GTGKT T A V
Sbjct: 1312 VPGLPIQSHRVPKVAGREMNENQLKAVASILAPKQTVSPALIIYGPFGTGKTFTLAVSVE 1371
Query: 428 HMAK-QGQGQVLVCAPSNVAVDQ--------LAEKISATGLKVVRLCAKSREAVSSP--V 476
+ K Q +VL+C SN A D L EK +K +R+ A++ S P V
Sbjct: 1372 QVVKKQPTAKVLICTHSNSAADLYITDYLHPLVEK-GINEIKPLRIHAETIRVQSIPEVV 1430
Query: 477 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L + R ++ + + Q+K KY + ++ A+ +
Sbjct: 1431 LKYCLIKERRGVECVHMPMVDDIDQIK------------KYSVI-------VTTLANSVA 1471
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAK--QVVLVGDHCQLGPVIMC 594
+G F ++IDE+ QA E E + PL L + +VVL GDH Q+ P +
Sbjct: 1472 LKRIGLEG------HFTHIIIDEAGQALECEAITPLTLATENTKVVLAGDHQQMSPEVYS 1525
Query: 595 KKAARAGLAQSLFERL----VLLGLK--PIRLQV--QYRMHPSLSEFPSNSFYEGTLQNG 646
K A QS+ +R+ + +G K P R+ + YR + +F S SFY L
Sbjct: 1526 KCARNLKFDQSILKRICDYYIDIGTKSEPYRIMMVDNYRCQSDILQFISKSFYGSRL--I 1583
Query: 647 VTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR-- 704
N Q D P+ FY G E TSY N E + V +
Sbjct: 1584 AKSNPPQPGHPDI------HPLSFYSAYGSE--LKVDTSYCNMAEVMEISDRVEHLCKHW 1635
Query: 705 ----SGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYII 760
+ S++GVI+PY Q I +LR++ E+ V + + QG+E +
Sbjct: 1636 PKDWGKIDYSKVGVISPYSTQVQQI------RQSLRKRYLTEVTVDRIFNVQGKEYRALF 1689
Query: 761 LSCVR------SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
+S VR S E+ +GFL D + LN AL+RA+ +V++G+P L
Sbjct: 1690 ISPVRTHAAESSTENLNLGFLTDRKLLNTALSRAQSMLVVVGDPVAL 1736
>gi|403222822|dbj|BAM40953.1| regulator of nonsense transcripts-related protein [Theileria
orientalis strain Shintoku]
Length = 1221
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/426 (36%), Positives = 229/426 (53%), Gaps = 39/426 (9%)
Query: 386 PGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQG-QGQVLVCAPSN 444
P L SQ A S + P++LIQGPPGTGKT + AI+ K ++L A +N
Sbjct: 753 PTTMSLTPSQHMACLSAITNPLTLIQGPPGTGKTHVACAIIDSWNKMYPDVRILAVADTN 812
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKD 504
VA D L E +S G+ +R+ A S + E + Y+ + + +H
Sbjct: 813 VAADNLIEGLSKRGITALRIGASSEWDLQE--EAIKGLYRYNNYLQMRMAGMH------- 863
Query: 505 EQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT 564
K+ L+ E + ++ TCVG+G+ L++ F V++DE Q+
Sbjct: 864 ----------KEANTLRVLLFTEAIKKHKIVIATCVGSGNEILSSHTFPFVIVDECAQSI 913
Query: 565 EPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQ 623
E +IP+ G + +VL+GDH QL P I+ +A+ GL +SL ERL+ + P+ L +Q
Sbjct: 914 EASNMIPIGRGCRSLVLIGDHKQLRPTIISMQASTLGLNKSLLERLIEDKVAPVHLLDIQ 973
Query: 624 YRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV-PNRPMFFYVQMGQEEI--- 679
RMHPS++EFP+ FY+G ++N + + + F WPV N +F V G
Sbjct: 974 RRMHPSIAEFPNMHFYDGQIRNQDVNDTNRPPILGFKWPVCGNNLVFVDVSTGSPNTQFE 1033
Query: 680 SASGTSYLNRTEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYI---VNYMSRNGAL 735
++ GTS N E V +V +FL++G V +QIG++TPY+ QR I VNYM
Sbjct: 1034 TSHGTSKFNTMELTCVLALVNSFLKAGDVKENQIGILTPYDAQRGMIRKNVNYMKD---- 1089
Query: 736 RQQLYKE--IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV 793
YK IE+ SVD FQG+EKD II S VRSN + IGFL DPRR+NV LTRA+ G++
Sbjct: 1090 ----YKTHLIEIDSVDGFQGKEKDLIIFSAVRSNVSKDIGFLRDPRRMNVMLTRAKRGLI 1145
Query: 794 ILGNPK 799
ILG+ +
Sbjct: 1146 ILGDER 1151
>gi|440300434|gb|ELP92903.1| hypothetical protein EIN_312750 [Entamoeba invadens IP1]
Length = 1343
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 257/520 (49%), Gaps = 100/520 (19%)
Query: 386 PGLP---ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMA------------ 430
PGL ELNASQ+ AV S L +SL+ GPPGTGKT + +IV H+
Sbjct: 410 PGLKNPVELNASQIAAVLSALNNHLSLVVGPPGTGKTSVAVSIVQHILFYREKIEIQRIE 469
Query: 431 ---------KQGQG-----QVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA-VSSP 475
+G+ +VLV A SN AV+ L E++ G+ VVR+ A + A +S
Sbjct: 470 MNTGRDFIPHRGKDISINKKVLVSASSNNAVNVLCERLVDFGISVVRIPADEKYADLSDK 529
Query: 476 VEHLTLHYQV----RHLDTS------------------------EKSELHKLQQ------ 501
V ++L Y+ +H D E E+ ++++
Sbjct: 530 VRGVSLLYRAYEYCKHADVDKDGNSLSDIQNLLKKKIDSFFTQQENKEICRIEEEYKESP 589
Query: 502 -----LKDEQGELSSSDEKKYK---------------ALKRATEREISQSADVICCTCVG 541
KD Q LS ++ K Y+ R EI+++ DVI T
Sbjct: 590 KLQLMFKDFQKYLSFANNKLYQRKRITLSDTENKTINDFTRINLAEITENYDVIAATLSK 649
Query: 542 AGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
A + +F +IDES Q+ EPE ++ ++ VL+GD QL P ++ +A G
Sbjct: 650 A----VFKIKFACAVIDESAQSIEPETF-SGIMNVQKAVLIGDIQQLPPTVVSNEAKNGG 704
Query: 602 LAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
L +S+FERL+ G+ L QYRMHP++S+FP+N+FY G L +GV ++R I+ +
Sbjct: 705 LEKSMFERLLQNGVAYALLTTQYRMHPAISQFPNNNFYNGKLVDGVDEDDRFDERIEGLF 764
Query: 662 PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQ 721
P P+ F G E SG SY N E V+ +V + +IG+I+PY Q
Sbjct: 765 PNNEFPVMFVHCKGDEFYGTSGKSYGNDEEKKVVKFMVKKLNEKNIRDDEIGIISPYATQ 824
Query: 722 RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
R L + +K IEV+SVD FQG EK +II+SCVRSNE++GIGF+ D RRL
Sbjct: 825 R-----------ELLGEEHKTIEVSSVDGFQGNEKPFIIISCVRSNENRGIGFVGDHRRL 873
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLV 821
NV+LTRA+YG+VI+G+ L P++ L+ + C V
Sbjct: 874 NVSLTRAKYGLVIIGDAYTLMINPIFKNLMKFLYDKNCFV 913
>gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus VF5]
gi|2984278|gb|AAC07803.1| DNA helicase [Aquifex aeolicus VF5]
Length = 530
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 179/495 (36%), Positives = 252/495 (50%), Gaps = 83/495 (16%)
Query: 387 GLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 445
G+ +LNA Q AV+ L+ + LI GPPGTGKT T + +A++G +VL A SNV
Sbjct: 45 GMTKLNAYQKKAVERALKAEKVFLIHGPPGTGKTTTLVECIKRLAQEGY-KVLATADSNV 103
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHKLQQL 502
AVD L E++ +KVVR+ R V ++ TL Y V+ D + K ++ L
Sbjct: 104 AVDNLVERLVRENVKVVRVGNPVR--VLKTIQRHTLDYLVQFEPEFDKARKI-YEEIDNL 160
Query: 503 KDEQGELSS---------SDEKKYKALKRAT--------------------ER------- 526
K+EQ + SDE+ K K T E+
Sbjct: 161 KEEQKKYVKPEPRYRRGLSDEEILKRAKTGTPVRGLSPKILRSMAKWIKLQEKVKELYEK 220
Query: 527 ----------EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA 576
+I A V+C T AG L N F V+IDE+TQATEP CLIPL+ G
Sbjct: 221 AKKEEEKAVNKILSRAQVVCTTNSTAGSEVLQNLNFDVVIIDEATQATEPSCLIPLIKG- 279
Query: 577 KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFP 634
K++++ GDH QL P ++ ++A A L+ +LFERL+ L + I L++QYRM+ + EF
Sbjct: 280 KKLIMAGDHKQLPPTVLSQEAQEA-LSYTLFERLLDLYGEEIYEILRIQYRMNKKIMEFS 338
Query: 635 SNSFYEGTLQNGVTINERQSSGI-------DFPWPV-----PNRPMFFYVQMGQEEISAS 682
+ FYEG L ++ + + P P P + + F G+E+
Sbjct: 339 NKMFYEGKLIADKSVENHTIKDLINPEKLKEIPEPFKSVLEPEKVVVFINVRGKEKQRRG 398
Query: 683 GTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK- 741
TS+ N EA KIV ++ G+ IGVI+PYE Q VN++ ++L K
Sbjct: 399 STSFYNEEEAKVAVKIVEYLMKIGLRSEHIGVISPYEDQ----VNFL-------EELLKD 447
Query: 742 -EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKV 800
E+EV +VD FQGREK+ II+S VRSNE IGFL D RRLNVALTRAR ++ LGN K
Sbjct: 448 FEVEVKTVDGFQGREKEVIIISFVRSNEKGEIGFLKDYRRLNVALTRARRKLITLGNEKT 507
Query: 801 LSKQPLWNGLLTHYK 815
LS ++ + + K
Sbjct: 508 LSSDEVYKQFIGYVK 522
>gi|291228829|ref|XP_002734380.1| PREDICTED: regulator of nonsense transcripts 1-like [Saccoglossus
kowalevskii]
Length = 2720
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 272/556 (48%), Gaps = 75/556 (13%)
Query: 330 SVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRF------ 383
+V+ + KS R++ ++ S ++ LGH + Q+ R RR
Sbjct: 2169 TVEIIKKSIPDRRVEDTVRMLR----ESSEFVQQIALGHPPKRQIPRQQSLRRLVMKVST 2224
Query: 384 -GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSA--AIVYHMAKQGQ-----G 435
GLP LN Q A+K L+ +++QGPPGTGK+ +A A + ++ + + G
Sbjct: 2225 NKREGLPSLNEDQFHAIKMSLENKFTVVQGPPGTGKSYMAANLANAFVLSNRDEPSMKGG 2284
Query: 436 QVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS- 494
++L CAPSN AVD A+ ++ + ++R+ +KS E PV LT Q + + +E S
Sbjct: 2285 RILYCAPSNKAVDVAADYLTRFDMNIIRMYSKSMEGKDYPVPGLTDITQYKRGNNAESSP 2344
Query: 495 -----ELHKL----------------QQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
LH++ + ++ S D + YKAL + E++ D
Sbjct: 2345 ALDDIALHRVIRKAPSKYGNEIRQFDSRFRNAAIPSSKKDIEDYKALIKKAEKDALIGCD 2404
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA-KQVVLVGDHCQLGPVI 592
VI CTC A RL Q +IDE+ TEPE L+PLV +QVVL+GDH QL P++
Sbjct: 2405 VILCTCSEAASKRLDKLCILQCIIDEAGMCTEPETLVPLVRANPEQVVLIGDHRQLQPIV 2464
Query: 593 MCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
+ + GL SL ER IRL++QYRMH ++ EFP+N FY+G L+ T+ +R
Sbjct: 2465 THNLSNQMGLGVSLLERYCDQN-HFIRLKIQYRMHNAICEFPNNQFYDGDLETAETVLKR 2523
Query: 653 Q--SSGIDFPWP-VPNRPMFFYVQMGQEE----ISASGTSYLNRT-----EAANVEKIVT 700
+ +D WP + P F +G+EE + G+ + + + + KI+T
Sbjct: 2524 SQLKTTMDGVWPGGKHVPTVFCHSVGKEESLKVTTDEGSEHSKKNLQEVKDVVRIAKILT 2583
Query: 701 TFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYII 760
T + G+ S+I +++ Y Q I G L+ + I V SV FQG E+DYII
Sbjct: 2584 T--KYGLAKSRIQILSQYRAQCHEIT------GELKGVNCQNIGVNSVIGFQGSEQDYII 2635
Query: 761 LSCVRSNEHQGI-------------GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 807
LS VRS + I GF+ D ++NVALTRAR G++I+GN +L W
Sbjct: 2636 LSTVRSLPQREIEERPTKGWLKKNLGFVTDEHQINVALTRARKGLIIIGNANLLRTDYNW 2695
Query: 808 NGLLTHYKEHECLVEG 823
LL Y+ C V+
Sbjct: 2696 RRLLEEYRRKNCCVDA 2711
>gi|255721903|ref|XP_002545886.1| hypothetical protein CTRG_00667 [Candida tropicalis MYA-3404]
gi|240136375|gb|EER35928.1| hypothetical protein CTRG_00667 [Candida tropicalis MYA-3404]
Length = 1106
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 301/629 (47%), Gaps = 89/629 (14%)
Query: 243 ESQSKDNVTIRWDIGLNKKRVAYFV------FPKE----DNELRLVPGDELRLRYSGDAA 292
E Q K N + I +N FV F K D + L+ DE+ A
Sbjct: 494 EDQDKKNNQYQLHIPMNSDVTDKFVSHKLKKFKKNPFSVDQTMFLILNDEIMWSGYIATA 553
Query: 293 HPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAV 352
G +K E + + +Q +P + H ++ + S R+ AMKT
Sbjct: 554 DEVASKKGRRVKKDVIELIIVLHPWTQPLPRTV-HVSNLKILPASQPVSRVLNAMKTLN- 611
Query: 353 DETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQG 412
+ +LG E +R R F LN SQ V+SVL I+++QG
Sbjct: 612 -----NLSFIKMILGKEP----IRQIDFRNFIKFRGENLNDSQKKGVQSVLNNSITVLQG 662
Query: 413 PPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQLAEKISATGLK-VVRLCAKSRE 470
PPGTGKT T I+ + +LV A SN+A+D +AEK+ K ++R+ A +E
Sbjct: 663 PPGTGKTSTIYEIILQLLDSLNTYPILVVAASNIAIDNIAEKLMKNHEKDILRITAGEKE 722
Query: 471 A---VSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE--QGELSSSDEKKYKALKRATE 525
S P+ + LH+++ + + QQ+ DE +G S YK K A E
Sbjct: 723 RDYNRSHPLASICLHHKMYD------AMPMRYQQVMDEMRRGYAPSIGTTAYK--KFAQE 774
Query: 526 R-----EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVL-GAKQV 579
R +I A V+ T V AG + N R V+IDE+TQ++EP LIPL L +++
Sbjct: 775 RFFLSNQIVTQAKVVLATPVVAGGIKSLN-NVRVVIIDEATQSSEPTTLIPLALPSVEKL 833
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KPIRLQVQYRMHPSLSEFPSNS 637
VLVGD QL + L+ SLFER++L G P L QYRMHP +SEF N
Sbjct: 834 VLVGDQKQLSCFSLI-----PNLSLSLFERVLLNGTYKTPHMLDTQYRMHPDISEFSRNR 888
Query: 638 FYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISA--------SGTSYLNR 689
FY G L++G+ + R G V + P++F+ G + G +Y NR
Sbjct: 889 FYGGLLKDGIDSSARHIEG------VTSSPLYFWDTKGNAREQSVRNFLREDRGYTYTNR 942
Query: 690 TEAANVEKIVTTFLRS-GVVPSQIGVITPYEGQRAYIVNYMSRNGALR---QQLYKEIEV 745
E A +++++ T + S GV QIG++TPY GQR I + + + + +Q+ E+++
Sbjct: 943 DEIAYIQQVLRTLIISKGVKRDQIGIVTPYSGQRDLISSVLVNDEIINPTNEQMKTEVDI 1002
Query: 746 --------------------ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
AS+D+FQGREKD++++SCVRSN IGFL D RRLNVAL
Sbjct: 1003 DDLKNDSKPVTIHIVSGIMIASIDAFQGREKDFMVMSCVRSNTKGVIGFLKDERRLNVAL 1062
Query: 786 TRARYGIVILGNPKVLSK-QPLWNGLLTH 813
TRA+Y ++++G+ + L + LW L +
Sbjct: 1063 TRAKYSLIMIGDVECLKRGDKLWKDYLEY 1091
>gi|294936357|ref|XP_002781732.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239892654|gb|EER13527.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 503
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 229/424 (54%), Gaps = 19/424 (4%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYH-----MAKQGQGQVL 438
G G+P L +Q+ A++S + PI+LIQGPPGTGKT T+ A+V H + +G+G+VL
Sbjct: 62 GDLGMP-LTEAQLNAIRSSWETPITLIQGPPGTGKTHTAVALVKHWVVNKITARGEGKVL 120
Query: 439 VCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHK 498
V A SN A D + + G++ R+ +++E R + +L
Sbjct: 121 VVADSNAAADNIRGLMVKAGIECYRV-GRAQETDGG----------TREVSDDVLRKLEG 169
Query: 499 LQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLID 558
+ ++D + + D K ++ ++ V+ TC+G+G L + F V+ID
Sbjct: 170 TRAVRDYRRAVILGDIHKLPYFRQRIDKAAVDEYQVLVATCIGSGHQLLDSVDFESVIID 229
Query: 559 ESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPI 618
E TQATEP L+PL GAK+ VL+GDH QL + C A GL SLFERL + G
Sbjct: 230 ECTQATEPASLVPLARGAKRCVLLGDHKQLPATVHCNTAKSGGLGISLFERLAMSGTPVH 289
Query: 619 RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEE 678
L +Q RMHPS++EF ++ FY+ +++ V+ + G+ +P P + Q+ E
Sbjct: 290 LLDIQRRMHPSIAEFSNHHFYDNRIKHEVS-DRPLIPGLRWPNPQIRVALVDTSQLIAGE 348
Query: 679 ISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQ 738
S GTS +NR EA + + + +G P QIG++ PY Q+++++ + + +
Sbjct: 349 -SKVGTSLMNREEARLLLDALYDAVANGTPPGQIGLVVPYNAQKSHVIAALKEDTRFSPE 407
Query: 739 LYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNP 798
+++ +VD FQG EK+ I S VRSN +GF+ DPRR+NV LTRAR G+V+ +
Sbjct: 408 QRAAVQINTVDGFQGHEKELIFFSAVRSNVSGQVGFIADPRRMNVMLTRARRGLVVFCDV 467
Query: 799 KVLS 802
++
Sbjct: 468 NTMT 471
>gi|254167906|ref|ZP_04874755.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289596630|ref|YP_003483326.1| DNA helicase [Aciduliprofundum boonei T469]
gi|197623197|gb|EDY35763.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289534417|gb|ADD08764.1| DNA helicase [Aciduliprofundum boonei T469]
Length = 655
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 263/552 (47%), Gaps = 95/552 (17%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEV-EVQMVRNTLPRRFG 384
+ G +D +F RM A+++ DE + + LLG+ E+ V L R
Sbjct: 121 SRGVRIDLYANDITFQRMLSALQSLK-DENKLR--LRAILLGNANPELCKVGIKLENR-- 175
Query: 385 APGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
LN Q AV+S++ + LI GPPGTGKT T A + M K+G +VL A SN
Sbjct: 176 -----RLNNFQRKAVESLIGSELFLIHGPPGTGKTTTLAEGIIQMVKKGY-RVLATADSN 229
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKD 504
VAVD L EK+ A + VVR+ +R S +EH TL Y V D K + +++ D
Sbjct: 230 VAVDNLVEKL-AHKVNVVRVGHPARIG-KSIIEH-TLDYIVAQ-DIEYKKAMEIWEKIDD 285
Query: 505 EQGELSS-------------SDE------------------------------------K 515
+ E DE K
Sbjct: 286 MRAEQEKYKKPTPQWRRGMGDDEIVYLANASRSYRGVPVEIMKNMAQWIKIQRRIEEYVK 345
Query: 516 KYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLG 575
K K ++ + + ++ADVIC T AG L N F V+IDE+TQ+ EP CLIP++ G
Sbjct: 346 KAKKMEEKVIKRVLKNADVICTTNSTAGSELLYNMDFDFVVIDEATQSIEPSCLIPMIKG 405
Query: 576 AKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP---IRLQVQYRMHPSLSE 632
+ ++ GDH QL P IM KA L +LFER + L P I L+VQYRM+ + +
Sbjct: 406 DR-YIMAGDHRQLPPTIMSYKAK--ALQLTLFERFI--KLYPHLSITLRVQYRMNEKIMK 460
Query: 633 FPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM-----------FFYVQMGQEEISA 681
FPS FY+ L ++ R + PM F +Q +EE
Sbjct: 461 FPSKLFYKDLLIAHPSVKNRSIEDLGVSAENLEEPMRSICEPQSIIVFLDMQNCKEEKRG 520
Query: 682 SGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK 741
TSY N EA V+ V L+ G+ IG+ITPY+ Q L + + +
Sbjct: 521 GSTSYYNECEAETVKDTVDCLLKIGLKEKHIGIITPYDDQ-----------VDLLRSMIE 569
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
+IE+ SVD FQGREKD II+S VRSN+ IGFL+D RRLNVA+TRA+ +++LGN K L
Sbjct: 570 DIEIKSVDGFQGREKDVIIISFVRSNDKGDIGFLDDLRRLNVAITRAKRKLIMLGNAKTL 629
Query: 802 SKQPLWNGLLTH 813
S ++ L+ +
Sbjct: 630 SSNEVYTKLIDY 641
>gi|432328902|ref|YP_007247046.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
gi|432135611|gb|AGB04880.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
Length = 650
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 190/549 (34%), Positives = 275/549 (50%), Gaps = 92/549 (16%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDE-TSVSGYIY--HHLLGHEVEVQMVRNTLPRRFGAPG 387
VD +F RM A+ + +E + G I +L HE +V NT
Sbjct: 121 VDLYANDITFQRMLEAVNSIKREEYLRLRGIILGRANLEIHEEQVNF-ENT--------- 170
Query: 388 LPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
LN Q AV+ + + LI GPPGTGKT T A + M ++G +VL A SNVAV
Sbjct: 171 --RLNEFQRRAVRRSIGSELFLIHGPPGTGKTTTLAEGIVQMVRRG-FKVLATADSNVAV 227
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKSEL-HKLQQLKDE 505
D L EK+ A + VVR+ +R + S +EH TL Y V R ++ + EL ++ +++E
Sbjct: 228 DNLVEKL-AHKVNVVRIGHPARIS-KSIIEH-TLDYIVSRDIEYRKAMELWERIDGMREE 284
Query: 506 QGELSS----------SDEKKYKA------------------------------LKRATE 525
Q + DE Y A +KRA +
Sbjct: 285 QSRYTKPTPQWRRGMGDDEIVYLANASRSYRGVPVEVMKGMAQWIKIQRRIDEYVKRAKK 344
Query: 526 RE------ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV 579
E + +ADVIC T AG L + +F V+IDE+TQA EP CLIP++ G + +
Sbjct: 345 MEERAIIRVLDNADVICTTNSTAGGEMLRDLKFDFVVIDEATQAVEPSCLIPMLKGTR-I 403
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNSF 638
++ GDH QL P +M A L +LFERL+ + I L++QYRM+ + EFPSN F
Sbjct: 404 LMAGDHKQLPPTVMSYDA--KALQLTLFERLIKIYPQASITLRIQYRMNEKIMEFPSNMF 461
Query: 639 YEGTLQNGVTINERQSS--GIDFPWPV--------PNRPMFFYVQMGQEEISASGTSYLN 688
Y G L+ T+ +R + GID P + P + F +EE TSY N
Sbjct: 462 YRGLLEAHRTVKDRTIADVGID-PSRISEMRDICNPEEVIIFVDLETEEEQRRGSTSYQN 520
Query: 689 RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 748
EA V +IV L+ G+ IG+ITPY+ Q + + + +++E+ SV
Sbjct: 521 PGEARCVTRIVNCLLKIGLKEKHIGIITPYDDQVDLLKSIIPN---------EDLEIKSV 571
Query: 749 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
D FQGREK+ I++S VR+N+ +GFL D RRLNVA+TRA+ ++I+GN K L P+++
Sbjct: 572 DGFQGREKEVIVISFVRANDRGELGFLTDLRRLNVAITRAKRKLIIVGNSKTLRAHPVYD 631
Query: 809 GLLTHYKEH 817
L+ Y EH
Sbjct: 632 SLI-DYIEH 639
>gi|401400080|ref|XP_003880707.1| putative ATP-dependent helicase [Neospora caninum Liverpool]
gi|325115118|emb|CBZ50674.1| putative ATP-dependent helicase [Neospora caninum Liverpool]
Length = 1394
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 225/429 (52%), Gaps = 35/429 (8%)
Query: 387 GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQG-QGQVLVCAPSNV 445
GLP L Q A S L ++L+QGPPGTGKT + AI+ + ++L A SNV
Sbjct: 863 GLP-LTRPQKAACLSALTNRLTLVQGPPGTGKTHVACAIIDAWQRNDPSKKILAVADSNV 921
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
A D L E +SA G++ VR+ S D E++ + L + +D
Sbjct: 922 AADNLMEGLSARGIRSVRVGNGSES------------------DLQEEA-IADLGRYRDY 962
Query: 506 QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATE 565
+ + K ++ A RE + VI TCVG+G + F +V+IDE QA E
Sbjct: 963 VRLKQNGMYGEAKTVRMALFREAIRRQPVIIATCVGSGHEMFDDLVFPRVIIDEGAQAIE 1022
Query: 566 PECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQY 624
P LIPL G + VL+GDH QL P I+ +AA GL SL ER V G+ PI+ L Q
Sbjct: 1023 PSNLIPLARGCRNFVLIGDHKQLPPTILSPEAASRGLDVSLLERFVGSGIAPIQLLDEQR 1082
Query: 625 RMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISAS-- 682
RMHPS++ FP+ FY+G +Q+ + + F WP N + V + +S S
Sbjct: 1083 RMHPSIAYFPNLQFYDGKIQSRDVDDRNRPPVAGFRWPSQNSRVCL-VDISAAGLSGSEA 1141
Query: 683 --GTSYLNRTEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 739
GTS + E + I+ + G V+PSQIGV+TPY+ Q+A + + N
Sbjct: 1142 SQGTSKYSAAEIDPIIAILQSVANEGSVLPSQIGVLTPYDAQKARLRKAI--NETFEPPA 1199
Query: 740 YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 799
+IEV SVD FQG+EKD II S VRSN IGFL DPRR+NV LTRA+ G++++G+
Sbjct: 1200 CYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRAKRGVIVVGD-- 1257
Query: 800 VLSKQPLWN 808
+ LWN
Sbjct: 1258 ---QLTLWN 1263
>gi|401881567|gb|EJT45865.1| hypothetical protein A1Q1_05671 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1018
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 238/457 (52%), Gaps = 44/457 (9%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCA 441
G P +P LN SQ A+ +L +SL+QGPPGTGKT + + + Q VLVCA
Sbjct: 528 GDPRVP-LNPSQTRAIAMMLSERLSLVQGPPGTGKTRVIVETIKLLKQHWQIPHPVLVCA 586
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV------------RHLD 489
+NVAVD L E + G+ VR + R VS VE TL ++ R+
Sbjct: 587 HTNVAVDNLVEGLKTQGVNAVRFGSPDR--VSPRVEAHTLEARIEQHPAYPVLNRARNSK 644
Query: 490 TSEKSELHKL---QQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPR 546
S ++EL + Q + +Q E+ + + Y LKR + E+ ADV+C TC+ A
Sbjct: 645 ESLQAELSENLAGPQREAKQKEIGKLNGRIY-LLKRLLQAEVLHEADVVCTTCLSATSRV 703
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
L F V +DE++ ATEP ++PL G+ QV ++GDH QL PVI+ + A + GL SL
Sbjct: 704 LEVIDFPFVFLDEASMATEPLSIVPLTKGSAQVAIIGDHKQLPPVIVSEAAQQGGLGTSL 763
Query: 607 FERLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER-------QSSGID 658
FERL+ P I L QYRMHPS++ F S +FY G L++G ++ + ++
Sbjct: 764 FERLIHEQAVPSIMLDTQYRMHPSIAAFSSEAFYNGQLRDGTVVDGQVDPVLHPPTTAFL 823
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG--VVPSQIGVIT 716
P ++ + F E S S N EA V IV L S + + IGVI
Sbjct: 824 LPDGDSSKSLTFLNHDFPE--SPQNRSIANHHEAGRVCDIVADLLASNPDLKGADIGVIA 881
Query: 717 PYEGQRAYIVNYMS----RNGALRQQL-------YKEIEVASVDSFQGREKDYIILSCVR 765
PY Q I +++ R A RQ L ++IE+ +VD F+GREK II S VR
Sbjct: 882 PYSAQIRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVIIFSTVR 941
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 802
SN +GFL D RRLNV LTRA+ +++LG+ + LS
Sbjct: 942 SNTGGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTLS 978
>gi|406696583|gb|EKC99865.1| hypothetical protein A1Q2_05830 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1018
Score = 239 bits (610), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 238/457 (52%), Gaps = 44/457 (9%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCA 441
G P +P LN SQ A+ +L +SL+QGPPGTGKT + + + Q VLVCA
Sbjct: 528 GDPRVP-LNPSQTRAIAMMLSERLSLVQGPPGTGKTRVIVETIKLLKQHWQIPHPVLVCA 586
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV------------RHLD 489
+NVAVD L E + G+ VR + R VS VE TL ++ R+
Sbjct: 587 HTNVAVDNLVEGLKTQGVNAVRFGSPDR--VSPRVEAHTLEARIEQHPAYPVLNRARNSK 644
Query: 490 TSEKSELHKL---QQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPR 546
S ++EL + Q + +Q E+ + + Y LKR + E+ ADV+C TC+ A
Sbjct: 645 ESLQAELSENLAGPQREAKQKEIGKLNGRIY-LLKRRLQAEVLHEADVVCTTCLSATSRV 703
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
L F V +DE++ ATEP ++PL G+ QV ++GDH QL PVI+ + A + GL SL
Sbjct: 704 LEVIDFPFVFLDEASMATEPLSIVPLTKGSAQVAIIGDHKQLPPVIVSEAAQQGGLGTSL 763
Query: 607 FERLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER-------QSSGID 658
FERL+ P I L QYRMHPS++ F S +FY G L++G ++ + ++
Sbjct: 764 FERLIHEQAVPSIMLDTQYRMHPSIAAFSSEAFYNGQLKDGTVVDGQVDPVLHPPTTAFL 823
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG--VVPSQIGVIT 716
P ++ + F E S S N EA V IV L S + + IGVI
Sbjct: 824 LPDGDSSKSLTFLNHDFPE--SPQNRSIANHHEAGRVCDIVADLLASNPDLKGADIGVIA 881
Query: 717 PYEGQRAYIVNYMS----RNGALRQQL-------YKEIEVASVDSFQGREKDYIILSCVR 765
PY Q I +++ R A RQ L ++IE+ +VD F+GREK II S VR
Sbjct: 882 PYSAQIRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVIIFSTVR 941
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 802
SN +GFL D RRLNV LTRA+ +++LG+ + LS
Sbjct: 942 SNTGGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTLS 978
>gi|435853073|ref|YP_007314392.1| DNA helicase, putative [Halobacteroides halobius DSM 5150]
gi|433669484|gb|AGB40299.1| DNA helicase, putative [Halobacteroides halobius DSM 5150]
Length = 750
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 188/567 (33%), Positives = 279/567 (49%), Gaps = 95/567 (16%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLG-HEVEVQMVRNTLPRRFG 384
+ G +D +F RM A+ T + LLG +VE N LP+
Sbjct: 204 DKGLRLDLYVNDITFQRMLDALGNLE-SATGRLKVLRDKLLGLADVEF----NQLPKIDY 258
Query: 385 APGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 443
+LN SQ AV+S L + L+ GPPGTGKT+TS I+ A G+ +L A S
Sbjct: 259 YN--KDLNDSQRQAVRSALAAKDFFLVHGPPGTGKTMTSIEILQQEA--GEKNILATADS 314
Query: 444 NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSEL----HK 498
N AVD L E++ A G+KV+R+ +R V+S V TL + ++ H E S+L +K
Sbjct: 315 NTAVDNLVERLVARGVKVLRVGHPAR--VNSLVREYTLDHIIQEHPKYKEASQLRDKAYK 372
Query: 499 L-----------------------QQLKD----------------------EQGELSSSD 513
L QQ++D + EL
Sbjct: 373 LSKQQDDNPQCIFPSGENRRGFSNQQIRDLGSKNINGRPRGLSPKKIKGMAKWLELQDEI 432
Query: 514 EKKYKALKRATER---EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLI 570
+ + ++R + E+ + A+V+C T AG LA F +LIDE+TQ+TEP LI
Sbjct: 433 NQLFSQIERLEDEAVTELIEEAEVVCTTNSTAGSEVLAEQNFDLLLIDEATQSTEPAALI 492
Query: 571 PLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR--LQVQYRMHP 628
P V+ + +V+LVGDH QL P I+ ++AAR GL++SLFERL+ + I+ L VQYRM+
Sbjct: 493 P-VVKSNKVILVGDHKQLPPTILNEEAARKGLSKSLFERLLEVHGAKIKEILNVQYRMNQ 551
Query: 629 SLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP----------MFFYVQMGQ-- 676
++ F S+ FY+ L + E + ++ P N P + F G
Sbjct: 552 AIMNFSSSQFYDQQLVAAKKVKEWNITDLNIQLPKGNSPAEKVLKIKDAVVFLDTSGMSA 611
Query: 677 -EEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 735
E TS NR EA V +I+ + + + S++ VITPY+ Q I
Sbjct: 612 PEYTKGDSTSLQNRIEAELVSEIINQTVNTKIDLSEVAVITPYKDQVDLI---------- 661
Query: 736 RQQLYK--EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV 793
+QL K E+EV +VD FQGREK+ +ILS VRSN+ IGFL D RRLNV+LTRA+ ++
Sbjct: 662 -KQLIKLEEVEVNTVDGFQGREKELVILSLVRSNQQDNIGFLRDIRRLNVSLTRAKKKLI 720
Query: 794 ILGNPKVLSKQPLWNGLLTHYKEHECL 820
ILG+ ++ + L+ + +++ L
Sbjct: 721 ILGDSSTITSHETYQSLVEYIEKNGYL 747
>gi|76155569|gb|AAX26862.2| SJCHGC04134 protein [Schistosoma japonicum]
Length = 441
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/247 (52%), Positives = 174/247 (70%), Gaps = 9/247 (3%)
Query: 241 MKESQSKDNVTIRWDIGLNKKRVAYFVFP--KEDNELRLVPGDELRLRYSGDAAHPAWQS 298
+KES +NV++RW+ LNK+RVAYF P E ELR++ GDEL +R ++ +
Sbjct: 198 IKESLKLENVSVRWETALNKRRVAYFRIPGANEGPELRIMHGDELIIR-QFNSPNDCLIG 256
Query: 299 VGHVIKL--TAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETS 356
VGHV+K+ +EV LE++ P++ + ++F WKST FDRM+ A+ + DE
Sbjct: 257 VGHVVKVPDNFSDEVGLEMKQVIDTPLE-PVTYKIEFKWKSTPFDRMRRAI-SVVTDEQH 314
Query: 357 --VSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
+ YI++ LLG E++ +++ LP+R+ AP LPELN SQVFAVK+VLQRP+SLIQGPP
Sbjct: 315 GLLPPYIFYRLLGQELDDMVLKCNLPKRYSAPDLPELNHSQVFAVKTVLQRPLSLIQGPP 374
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKTVTSA+IVYH+ + Q +VLV APSN AVDQL EKI TGLKVVRLCA+SREA++S
Sbjct: 375 GTGKTVTSASIVYHLNQIHQKKVLVVAPSNTAVDQLCEKIDRTGLKVVRLCARSREALAS 434
Query: 475 PVEHLTL 481
PV L L
Sbjct: 435 PVSRLML 441
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/101 (69%), Positives = 82/101 (81%), Gaps = 2/101 (1%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 202
HAC YCG+ +PACVV CN + +KWFCN RGNTSGSHI+NHLVRA+ KEV LHKD PL +
Sbjct: 1 HACAYCGIHDPACVVFCN--TTKKWFCNGRGNTSGSHIINHLVRARAKEVTLHKDGPLKD 58
Query: 203 TILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNMMKE 243
T+LECY CG +NVFLLGF+ AK+ESVVVLLCR C N K+
Sbjct: 59 TLLECYVCGSKNVFLLGFVPAKSESVVVLLCRNVCANANKD 99
>gi|358057220|dbj|GAA96829.1| hypothetical protein E5Q_03501 [Mixia osmundae IAM 14324]
Length = 925
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 244/463 (52%), Gaps = 46/463 (9%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVT--SAAIVYHMAKQGQGQVLVCA 441
G P L +LN +Q+ A+ L +LIQGPPGTGK++T A + + Q +LVCA
Sbjct: 454 GDPVL-DLNRTQIRAIAQSLSSRCALIQGPPGTGKSITIIEALRLLKVHFQVPQPILVCA 512
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEL--HKL 499
P++VAVDQL + GL+ +R+ + + VS E + QV +EK E+ ++
Sbjct: 513 PTHVAVDQLLARAVKAGLRPLRVGLEDK--VSPSAEPYCMLAQVARHPFAEKLEVMSDRI 570
Query: 500 QQLKDEQ-GELSSSDEKKYKALKRATER----------EISQSADVICCTCVGAGDPRLA 548
+ L ++ G ++ DE KR +I + DVI TC+GA +A
Sbjct: 571 RGLDHQRIGPAATPDEAVDTKFKRVLSSRYFLESLIWADICSNVDVIFSTCLGASVSHVA 630
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
+ F V IDE+ Q E L+PL+ G++Q+VL+GDH QL + M A + G SLFE
Sbjct: 631 SIDFPIVFIDEAAQCNEASTLVPLMKGSQQLVLIGDHKQLPSIAMSPDATQEGFNISLFE 690
Query: 609 RLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNG-VTINERQSSGIDFPWPVPNR 666
RL++ P + L QYRMHP +S+FP+ +FY G L++ T+ +Q++ P
Sbjct: 691 RLMVSKRVPSVMLDTQYRMHPDISKFPNMAFYRGQLRDAPSTLKSKQAAIRSRFSPAGKS 750
Query: 667 PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL--RSGVVPSQIGVITPYEGQ--- 721
++ E G SY+N EA + IV L S + S IG+ITPY GQ
Sbjct: 751 SALTFINCDGLE-QKEGKSYINEGEAEEITLIVRDLLARNSDLRCSDIGIITPYAGQVHR 809
Query: 722 --RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
R + ++ GA Q IEV+SVD FQGREK+ I+ S VRSN+H +GFL+D R
Sbjct: 810 LRRMMLQSWRFPAGARVDQ----IEVSSVDGFQGREKEVIVFSAVRSNKHSQLGFLSDRR 865
Query: 780 RLNVALTRARYGIVILGNPKVL--------------SKQPLWN 808
RLNVALTRA+ + ++GN L SK P+W+
Sbjct: 866 RLNVALTRAKAALFVVGNALTLQGKTPASGATAVSPSKTPIWS 908
>gi|291228827|ref|XP_002734379.1| PREDICTED: regulator of nonsense transcripts 1-like [Saccoglossus
kowalevskii]
Length = 2926
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 263/553 (47%), Gaps = 70/553 (12%)
Query: 330 SVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAP--- 386
+V+ + KS R+Q ++ + ++ LGH + + R RR
Sbjct: 2377 TVEIIKKSIPDRRVQDTVRMLG----DSTDFVQQIALGHPPKSPIPRQQSLRRLVMKVST 2432
Query: 387 ----GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSA--AIVYHMAKQGQ-----G 435
GLP LN Q+ A+K L+ +++QGPPGTGK+ T+A A + ++ + + G
Sbjct: 2433 NRREGLPSLNQDQIHAIKMSLENKFTIVQGPPGTGKSYTAANLANAFVLSNRDEPSMKGG 2492
Query: 436 QVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLT--------------- 480
++L CAPSN AVD A+ + + +R+ +KS E PV LT
Sbjct: 2493 RILYCAPSNKAVDVAADYLKRFDMNTIRMYSKSMEGKDYPVPGLTDITRYKRGNNAESNP 2552
Query: 481 ------LHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
LH +R + E+ + S D + YKAL + E++ DV
Sbjct: 2553 ALDDIALHRVIRKASSKCGKEIREFDSRFRNAIPQSKQDIENYKALIKKAEKDALIGCDV 2612
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA-KQVVLVGDHCQLGPVIM 593
I CTC A RL Q +IDE+ TEPE L+PLV +QVVL+GDH QL P++
Sbjct: 2613 ILCTCSEAASKRLDKLGILQCIIDEAGMCTEPETLVPLVRAKPEQVVLIGDHRQLQPIVP 2672
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
+++ GL SL ER IRL++QYRMH ++ EFP++ FY+G L+ T+ +R
Sbjct: 2673 HNLSSQMGLGVSLLERYCDEN-HFIRLKMQYRMHDAICEFPNSQFYDGELETAETVLKRS 2731
Query: 654 --SSGIDFPWP-VPNRPMFFYVQMGQEEI------SASGTSYLNRTEAANVEKIVTTF-L 703
+ +D WP + P F +G+EE S S N E +V +I
Sbjct: 2732 QFKTTMDGVWPGGKHVPTVFCHCVGREESLKVTTDEGSEQSKKNLQEVKDVVRIAKIMSK 2791
Query: 704 RSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSC 763
R + S+I +++ Y Q I G L++ + I V SV FQG E+DYIILS
Sbjct: 2792 RYSLRTSRIQILSQYRAQCHEI------KGELKRANCQSIGVNSVIGFQGSEQDYIILST 2845
Query: 764 VRSNEHQGI-------------GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
VRS + I GF+ D ++NVALTRAR G++I+GN +L W L
Sbjct: 2846 VRSLPQREIEERPTKGWLKKNLGFVTDEHQINVALTRARKGLIIIGNANLLRTDHNWRKL 2905
Query: 811 LTHYKEHECLVEG 823
L Y+ C V+
Sbjct: 2906 LEEYRRKNCCVDA 2918
>gi|189463893|ref|ZP_03012678.1| hypothetical protein BACINT_00227 [Bacteroides intestinalis DSM
17393]
gi|189438466|gb|EDV07451.1| putative DNA helicase [Bacteroides intestinalis DSM 17393]
Length = 629
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 247/468 (52%), Gaps = 48/468 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 179 RELYPVRF-----PWLNSTQENAVNKVLYSRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 232
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R S
Sbjct: 233 PQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFEGHPAYS 288
Query: 495 ELHKLQQLKDEQG--------ELSSSDEKKYKALKRATEREISQSAD------VICCTCV 540
EL +++ E G E S+ + + RAT+ EI +AD VI T V
Sbjct: 289 ELWSIRKAIREMGGKHRGSYEERESARNRMSRLRDRATQLEIQINADLFDNAHVITSTLV 348
Query: 541 GAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
+ L RF + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 349 SSNHRILNGHRFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAARG 407
Query: 601 GLAQSLFERLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
GL +L ER+V KP L+VQYRMH + +FPS FY G L+ I R
Sbjct: 408 GLESTLMERVV--ANKPSTVSLLKVQYRMHEEIMKFPSQWFYNGELEAAPEIRYRGILDW 465
Query: 658 DFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL-RSG---VVPSQ 711
D P W + M F +EE +N+ EA + + + ++ R G V+ +
Sbjct: 466 DTPISW-IDTSEMDF-----KEEFVGETFGRINKAEADLLLQELKVYINRIGGKRVLEER 519
Query: 712 I--GVITPYEGQRAYIVNYMSRNGALRQQLYKEI-EVASVDSFQGREKDYIILSCVRSNE 768
I G+I+PY+ Q Y+ N + +G+L+ Y+ + V +VD FQG+E+D I +S VR+NE
Sbjct: 520 IDFGIISPYKAQVQYLRNKIKASGSLKP--YRSLLTVNTVDGFQGQERDVIFISLVRANE 577
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
IGFLND RR+NVA+TRAR +VILG L ++ L+ H ++
Sbjct: 578 EGQIGFLNDLRRMNVAITRARMKLVILGEVNTLKHHKFYHKLIEHIQQ 625
>gi|237843993|ref|XP_002371294.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
gi|211968958|gb|EEB04154.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
Length = 1419
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 225/429 (52%), Gaps = 35/429 (8%)
Query: 387 GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQG-QGQVLVCAPSNV 445
GLP L Q A S L ++L+QGPPGTGKT + AI+ + ++L A SNV
Sbjct: 888 GLP-LTRPQKAACLSALTNRLTLVQGPPGTGKTHVACAIIDAWQRNDPSKKILAVADSNV 946
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
A D L E +SA G++ VR+ S D E++ + L + +D
Sbjct: 947 AADNLMEGLSARGIRSVRVGNGSES------------------DLQEEA-IADLGRYRDY 987
Query: 506 QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATE 565
+ + K ++ A RE + VI TCVG+G + F +V+IDE QA E
Sbjct: 988 VRLKQNGMFGEAKTVRMALFREAIRRQPVIIATCVGSGHEMFDDLVFSRVIIDEGAQAIE 1047
Query: 566 PECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQY 624
P LIPL G + VL+GDH QL P I+ +AA GL SL ER V G+ PI+ L Q
Sbjct: 1048 PSNLIPLAHGCRNFVLIGDHKQLPPTILSPEAAARGLDVSLLERFVGSGIAPIQLLDEQR 1107
Query: 625 RMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISAS-- 682
RMHPS++ FP+ FY+G +Q+ + + F WP + + V + +S S
Sbjct: 1108 RMHPSIAYFPNLQFYDGKIQSRDVDDGNRPPVAGFRWPSQHSRVCL-VDISAAGLSGSET 1166
Query: 683 --GTSYLNRTEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 739
GTS N E + I+ + G V+PSQIGV+TPY+ Q+A + + N
Sbjct: 1167 SQGTSKYNAAEIDPIIAILQSVANEGSVLPSQIGVLTPYDAQKARLRKAI--NETFVPPA 1224
Query: 740 YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 799
+IEV SVD FQG+EKD II S VRSN IGFL DPRR+NV LTRA+ G++++G+
Sbjct: 1225 CYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRAKRGVIVVGD-- 1282
Query: 800 VLSKQPLWN 808
+ LWN
Sbjct: 1283 ---QLTLWN 1288
>gi|221483749|gb|EEE22061.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1431
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 225/429 (52%), Gaps = 35/429 (8%)
Query: 387 GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQG-QGQVLVCAPSNV 445
GLP L Q A S L ++L+QGPPGTGKT + AI+ + ++L A SNV
Sbjct: 888 GLP-LTRPQKAACLSALTNRLTLVQGPPGTGKTHVACAIIDAWQRNDPSKKILAVADSNV 946
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
A D L E +SA G++ VR+ S D E++ + L + +D
Sbjct: 947 AADNLMEGLSARGIRSVRVGNGSES------------------DLQEEA-IADLGRYRDY 987
Query: 506 QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATE 565
+ + K ++ A RE + VI TCVG+G + F +V+IDE QA E
Sbjct: 988 VRLKQNGMFGEAKTVRMALFREAIRRQPVIIATCVGSGHEMFDDLVFSRVIIDEGAQAIE 1047
Query: 566 PECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQY 624
P LIPL G + VL+GDH QL P I+ +AA GL SL ER V G+ PI+ L Q
Sbjct: 1048 PSNLIPLAHGCRNFVLIGDHKQLPPTILSPEAAARGLDVSLLERFVGSGIAPIQLLDEQR 1107
Query: 625 RMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISAS-- 682
RMHPS++ FP+ FY+G +Q+ + + F WP + + V + +S S
Sbjct: 1108 RMHPSIAYFPNLQFYDGKIQSRDVDDGNRPPVAGFRWPSQHSRVCL-VDISAAGLSGSET 1166
Query: 683 --GTSYLNRTEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 739
GTS N E + I+ + G V+PSQIGV+TPY+ Q+A + + N
Sbjct: 1167 SQGTSKYNAAEIDPIIAILQSVANEGSVLPSQIGVLTPYDAQKARLRKAI--NETFVPPA 1224
Query: 740 YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 799
+IEV SVD FQG+EKD II S VRSN IGFL DPRR+NV LTRA+ G++++G+
Sbjct: 1225 CYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRAKRGVIVVGD-- 1282
Query: 800 VLSKQPLWN 808
+ LWN
Sbjct: 1283 ---QLTLWN 1288
>gi|410076224|ref|XP_003955694.1| hypothetical protein KAFR_0B02620 [Kazachstania africana CBS 2517]
gi|372462277|emb|CCF56559.1| hypothetical protein KAFR_0B02620 [Kazachstania africana CBS 2517]
Length = 1164
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 249/493 (50%), Gaps = 77/493 (15%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVDQ 449
N SQ+ A++ VL +++IQGPPGTGKT T I+ + ++C A SN+A+D
Sbjct: 693 FNISQMDAIEQVLNNRVTVIQGPPGTGKTSTIEEIILQLISSFHSFPILCVAASNIAIDN 752
Query: 450 LAEKI--SATGLKVVRLCAKSREA---VSSPVEHLTLHYQVRH------LDTSEKSELHK 498
+AEKI S +K++R+ + +E+ + P+ + LH V + ++K +
Sbjct: 753 IAEKIMHSRPDIKILRILSDRKESEYNMEHPLGKICLHNIVYDQMPPDMKELTDKVRSGR 812
Query: 499 LQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI- 557
+Q+L + D Y + + + +SQ A +I T + AG +L + V+I
Sbjct: 813 MQELSKRE------DSNLYIFKNKISNKNVSQ-AQIIFTTNITAGGRQLKAIKEVPVVIM 865
Query: 558 DESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG-- 614
DESTQ++E L+PL L G K V VGD QL + L SLFER++L G
Sbjct: 866 DESTQSSEASTLVPLSLPGIKSFVFVGDEKQLSSF-----SNVPQLELSLFERVLLNGSY 920
Query: 615 LKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY-VQ 673
PI L VQYRMHP +SEFP FY+ L++GVT +D WP P+FFY
Sbjct: 921 KSPIMLDVQYRMHPKISEFPILKFYKNQLKDGVT-------EVDRAWPGITYPLFFYQCD 973
Query: 674 MGQEEISA------SGTSYLNRTEAANVEKIV-TTFLRSGVVPSQIGVITPYEGQRAYIV 726
G+E ++ S +Y+N+ E + KI+ L V +IG+ITPY QR +
Sbjct: 974 RGKESVTVNRRNNLSALTYINQYECQEIVKILYKLILEKNVSLDEIGIITPYSAQRDLLS 1033
Query: 727 NYMSRNG-------ALRQQ----------------------LYKEIEVASVDSFQGREKD 757
+ + A+ QQ + + VA+VDSFQG EK+
Sbjct: 1034 KVLLEDDIINPEGKAMEQQNDEAEFLNKNNVDYSVQSHVVNIINGLHVATVDSFQGHEKN 1093
Query: 758 YIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKE 816
+II SCVR+N IGFL D RRLNVALTRAR G++I+GN VL LW +T ++
Sbjct: 1094 FIIFSCVRNNAENKIGFLRDERRLNVALTRARNGLIIVGNKHVLKAGDKLWREFVTFLED 1153
Query: 817 HECLVEGPLNNLK 829
+ NNL+
Sbjct: 1154 KGVI----FNNLE 1162
>gi|406606341|emb|CCH42332.1| Regulator of nonsense transcripts 1 [Wickerhamomyces ciferrii]
Length = 1077
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 264/509 (51%), Gaps = 64/509 (12%)
Query: 360 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT 419
+ + LLG + Q + P ++ P +LN Q+ A+ VL PI+++QGPPGTGKT
Sbjct: 577 FFQNMLLGKNLLNQTNKTLRPLKY--PTTTKLNNPQLIAINQVLDNPITILQGPPGTGKT 634
Query: 420 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISAT-GLKVVRLCAKSREAVSSPVEH 478
T ++ + K +LV A SNVA+D +AEK+ L+++R+ + ++E+ + H
Sbjct: 635 STINELILQLVKDTYP-ILVVAASNVAIDNIAEKLMKNKDLEILRILSTAKESEYNERHH 693
Query: 479 LT---LHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVI 535
L LH +V +EK +L+ K ++ +++ ++ L+ ++ SA VI
Sbjct: 694 LNPICLHRKVFDNLPTEKQDLY--LDFKMDRRQINKNEFFALTKLQIKETDKLVNSAKVI 751
Query: 536 CCTCVGAGDPRLANFRFRQVLI-DESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIM 593
T + AG P L + +LI DESTQ+ E L+PL L G ++++LVGD QL
Sbjct: 752 LTTTITAGGPHLRHLDKIPILIMDESTQSNEASTLVPLSLKGLEKILLVGDEKQLSSF-- 809
Query: 594 CKKAARAGLAQSLFERLVLLG--LKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE 651
L QSLFER++ G P LQ+QYRM+P +S+FP+ FYE L +GVT +
Sbjct: 810 ---NDIPYLEQSLFERVLKNGTYFNPNMLQIQYRMNPKISKFPNIKFYENKLIDGVTEQD 866
Query: 652 RQSSGI------DF-----PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVT 700
R + GI D+ P+ F + G + +SY N EA + K++
Sbjct: 867 RTTFGIPPLLFIDYGDHYKETQSLKNPIKFLINSG------NISSYQNIGEANLILKLIY 920
Query: 701 TFL-RSGVVPSQIGVITPYEGQRAYIVNYMSRNGALR---QQLYKEIE------------ 744
+ G+ IG+ITPY QR I + + + +++ +EI+
Sbjct: 921 ELNHKGGINLKDIGIITPYSSQRDIIAQLIRNDRKINPNFEKIQEEIDDDFNHSNNSQFK 980
Query: 745 ------------VASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 792
++S+D+FQGREK++II SCVRSNE IGF+ D RRLNVALTRA+ +
Sbjct: 981 KPSSIKTICGLMISSIDAFQGREKNHIIFSCVRSNEFNKIGFVKDLRRLNVALTRAKNSL 1040
Query: 793 VILGNPKVLSK-QPLWNGLLTHYKEHECL 820
I+GN + + +WN L+ H + + C+
Sbjct: 1041 TIVGNKSCMKQGDSVWNDLINHLETNHCI 1069
>gi|254167856|ref|ZP_04874705.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|197623147|gb|EDY35713.1| DNA helicase, putative [Aciduliprofundum boonei T469]
Length = 655
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 267/551 (48%), Gaps = 93/551 (16%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEV-EVQMVRNTLPRRFG 384
+ G +D +F RM A+++ DE + + LLG+ E+ V L R
Sbjct: 121 SRGVRIDLYANDITFQRMLSALQSLK-DENKLR--LRTLLLGNANPELCKVGIKLENR-- 175
Query: 385 APGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
LN Q AV+S++ + LI GPPGTGKT T A + M K+G +VL A SN
Sbjct: 176 -----RLNNFQKKAVESLIGSELFLIHGPPGTGKTTTLAEGIIQMVKKGY-KVLATADSN 229
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-------RHLDTSEKSELH 497
VAVD L EK+ A + VVR+ +R S +EH TL Y V + ++ EK +
Sbjct: 230 VAVDNLVEKL-AHKVNVVRVGHPARIG-KSIIEH-TLDYIVAQDIEYKKAMEIWEKIDNM 286
Query: 498 KLQQLK--------------DEQGELSSSDE---------------------------KK 516
+ +Q K DE L+++ KK
Sbjct: 287 RAEQEKYKKPTPQWRRGMGDDEIVYLANASRSYRGVPVDIMKNMAQWIKIQRRIEEYVKK 346
Query: 517 YKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA 576
K ++ + + ++ADVIC T AG L + F V+IDE+TQ+ EP CLIP++ G
Sbjct: 347 AKKMEEKVIKRVLKNADVICTTNSTAGSELLYDMDFDFVVIDEATQSIEPSCLIPMIKGD 406
Query: 577 KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP---IRLQVQYRMHPSLSEF 633
+ ++ GDH QL P IM KA L +LFER + L P I L+VQYRM+ + +F
Sbjct: 407 R-YIMAGDHRQLPPTIMSYKAK--ALQLTLFERFI--KLYPHLSITLRVQYRMNEKIMKF 461
Query: 634 PSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM-----------FFYVQMGQEEISAS 682
PS FY L ++ R + PM F +Q +EE
Sbjct: 462 PSKLFYNDLLIAHPSVKNRSIEDLGVSAENLEEPMRSICEPQSIIVFLDMQNCKEEKRRG 521
Query: 683 GTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE 742
TSY N EA V+ V L+ G+ IG+ITPY+ Q L + + ++
Sbjct: 522 STSYYNECEAGMVKDTVDCLLKIGLKEKHIGIITPYDDQ-----------VDLLRSMIED 570
Query: 743 IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 802
IE+ SVD FQGREKD II+S VRSN+ IGFL+D RRLNVA+TRA+ +++LGN K LS
Sbjct: 571 IEIKSVDGFQGREKDVIIISFVRSNDKGDIGFLDDLRRLNVAITRAKRKLIMLGNAKTLS 630
Query: 803 KQPLWNGLLTH 813
++ L+ +
Sbjct: 631 SNEVYAKLIDY 641
>gi|325280121|ref|YP_004252663.1| helicase [Odoribacter splanchnicus DSM 20712]
gi|324311930|gb|ADY32483.1| putative helicase [Odoribacter splanchnicus DSM 20712]
Length = 627
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 265/512 (51%), Gaps = 49/512 (9%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
V + TS+ M A++ A + + + + LLG ++ R T P RF
Sbjct: 133 LGVQLYFDDTSYKTMFAALREVAEAKGNRTARLREVLLGKAPALR--RETGPVRF----- 185
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LNASQ AV VL + ++++ GPPGTGKT T VY + + QV+V A SN AV
Sbjct: 186 PWLNASQEKAVNQVLCAKEVAVVHGPPGTGKTTTLVEAVYETLHR-ENQVMVSAQSNTAV 244
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LKDEQ 506
D +AEK+ G+ V+R+ +R V+ + L Y+ R S+ EL ++++ +++
Sbjct: 245 DWIAEKLVDRGIPVLRIGNPTR--VNDKM--LAFTYERRFEAHSDYPELWQIRKTIREMT 300
Query: 507 GELSSSDEKKYKALK--------RAT------EREISQSADVICCTCVGAGDPRLANFRF 552
G L S + + L RAT + E+ A VI CT VGA L RF
Sbjct: 301 GRLRKSGREDRERLHNQLTKLRVRATGLEIRIDTELFTEARVIACTLVGAASRVLERKRF 360
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 612
+ IDE+ QA E C I + A +V+L GDHCQL P I C +AAR GL ++L E++VL
Sbjct: 361 SSLFIDEAAQAIEAACWIA-ISRADRVILAGDHCQLPPTIKCIEAARGGLGRTLLEKVVL 419
Query: 613 LGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY 671
+ + L ++QYRMH + FPS FY L+ + R +DF PV +
Sbjct: 420 HKPETVSLLKIQYRMHEDIMRFPSRWFYHDELEAAPEVKYR--GILDFDTPVS------W 471
Query: 672 VQMG----QEEISASGTSYLNRTEAANVEKIVTTFL-RSGV---VPSQI--GVITPYEGQ 721
+ QE+ A GT LN EA + + + ++ R G+ + I GVI+PY Q
Sbjct: 472 IDTSELDLQEKAVAEGTGRLNTGEAELLVRELKNYMERIGIRRILEEHIDFGVISPYRAQ 531
Query: 722 RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
Y+ + + + R + I V +VD FQG+E+D I++S VR+NE IGFL D RR+
Sbjct: 532 VHYLRHLLKKEPFFRP-CRRLITVHTVDGFQGQERDVIMISLVRANEKGQIGFLRDLRRM 590
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
NVA+TRAR ++ILG L++ P + L +
Sbjct: 591 NVAITRARMKLLILGEAVTLTRHPFYRELYEY 622
>gi|87311458|ref|ZP_01093578.1| DNA-binding protein [Blastopirellula marina DSM 3645]
gi|87285870|gb|EAQ77784.1| DNA-binding protein [Blastopirellula marina DSM 3645]
Length = 687
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 236/454 (51%), Gaps = 46/454 (10%)
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P+LNASQ AV+ L R S+I GPPGTGKT+T A IV +G+ +VL CAPSN+AV
Sbjct: 240 PQLNASQQAAVQLALSARDFSIIHGPPGTGKTITLAEIVRAAVARGE-KVLACAPSNLAV 298
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDT--SEK--SELHKL--- 499
D L E+ A GLK VRL +R VS + L VR H D +EK SE L
Sbjct: 299 DNLVERFWACGLKAVRLGHPAR--VSESLHDALLEALVREHPDAKLAEKLVSEAKTLFRK 356
Query: 500 --------------QQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDP 545
+ L+DE EL + +++ T + A V+CCT G D
Sbjct: 357 ADRFTRSKPAPGEKRSLRDEARELLDDAAR----IQQQTLERLLDDAPVVCCTLTGVDDD 412
Query: 546 RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQS 605
L RF +IDE+ Q TEP C IP V ++++V+ GDHCQL P I+ ++A AG S
Sbjct: 413 LLGARRFDLAVIDEACQTTEPACWIP-VSRSQRLVIAGDHCQLPPTIVSREAEAAGFGVS 471
Query: 606 LFERLVLLGLKPI-RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP 664
+ ERL+ + RL++QYRMH + EF S FY+G L ++ + + +
Sbjct: 472 MLERLIARYPQAAQRLELQYRMHAHIMEFSSLEFYDGALLADPSVEAHSLTDLIAADELW 531
Query: 665 NRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQ 721
+P+ F+ G QEE S +S N EA V + V + + P QI VI+PY Q
Sbjct: 532 AKPVQFFDTAGADYQEEQDDS-SSRTNPREAELVVRKVNQLIALEMPPEQIAVISPYAAQ 590
Query: 722 RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
LR+ L +E SVD FQGRE++ +I S VRSNE IGFL D RR+
Sbjct: 591 VRL----------LRESLPGGVECDSVDGFQGREQEVVICSLVRSNEKGEIGFLADVRRM 640
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
NVA+TRA+ ++++G+ + + L + +
Sbjct: 641 NVAMTRAKRKLIVIGDSSTIGGNEFYARFLEYVE 674
>gi|255718735|ref|XP_002555648.1| KLTH0G14190p [Lachancea thermotolerans]
gi|238937032|emb|CAR25211.1| KLTH0G14190p [Lachancea thermotolerans CBS 6340]
Length = 1083
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 253/483 (52%), Gaps = 66/483 (13%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVDQ 449
N SQ A++ VL I+++QGPPGTGKT T I+ + + ++C A SN+A+D
Sbjct: 611 FNESQKAAIQHVLNNSITVLQGPPGTGKTSTIEEIILQLIENFHTLPILCVAASNIAIDN 670
Query: 450 LAEKISAT--GLKVVRLCAKSREAVSSPVEHL---TLHYQV-RHLDTSEKSELHKLQQLK 503
+AEK +K++R+ ++S+E+ +P L LH V L K + KL+
Sbjct: 671 IAEKFMENRPDIKILRIVSQSKESQYNPKHMLGKICLHNIVYEQLPADMKDNISKLRS-- 728
Query: 504 DEQGELSSSDEKKYKALKRA-TEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDEST 561
G +S + K + + A ++R I+Q A +I T + +G +L R V++DEST
Sbjct: 729 GVPGLVSKNQYNKLLSTQNAISDRYIAQ-AQIIFTTNIASGGRQLKAIRELPAVIMDEST 787
Query: 562 QATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KPI 618
Q++E L+PL L G K+ V VGD QL + L SLFER++ G KP
Sbjct: 788 QSSEVSTLVPLSLPGIKRFVFVGDEKQLSSF-----SNVPQLEMSLFERILTNGTYEKPH 842
Query: 619 RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYV--QMGQ 676
L QYRMHP++SEFP FYEG L++GVT +++ WP + P+FFY Q +
Sbjct: 843 MLDTQYRMHPAISEFPIAKFYEGKLKDGVTAEDKK-------WPGISYPLFFYQCNQGSE 895
Query: 677 EEISAS-----GTSYLNRTEAANVEKIV-TTFLRSGVVPSQIGVITPYEGQRAYIVNYMS 730
++ S G +Y N EA + ++ L GV +IGVITPY QR I +
Sbjct: 896 NKVFNSKRGMRGFTYNNAHEAEYILAVLHKLILEKGVKTDEIGVITPYSSQRDLISEMLV 955
Query: 731 RN-------GALRQQLYKE-----------------------IEVASVDSFQGREKDYII 760
++ A+ Q++ K+ + VA+VDSFQG EK +++
Sbjct: 956 KDPIVNPSGKAMEQEMDKDDALGGGESVSGSANKVTINIVNGVYVATVDSFQGHEKSFVL 1015
Query: 761 LSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHEC 819
SCVR+N IGF+ D RR+NVALTRA+ G+V++GN V+ K LW + + +E E
Sbjct: 1016 FSCVRNNSENKIGFVKDRRRMNVALTRAKNGLVVVGNKDVMKKGDQLWADYINYLEEKEV 1075
Query: 820 LVE 822
+ E
Sbjct: 1076 IFE 1078
>gi|313148991|ref|ZP_07811184.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424664802|ref|ZP_18101838.1| hypothetical protein HMPREF1205_00677 [Bacteroides fragilis HMW
616]
gi|313137758|gb|EFR55118.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404575335|gb|EKA80078.1| hypothetical protein HMPREF1205_00677 [Bacteroides fragilis HMW
616]
Length = 656
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 248/463 (53%), Gaps = 43/463 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN +Q AV VL+ + ++++ GPPGTGKT T VY + +
Sbjct: 204 REIYPVRF-----PWLNTTQEEAVNKVLRAKDVAIVHGPPGTGKTTTLVEAVYETLHR-E 257
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 258 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFESHPAYT 313
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREI------SQSADVICCTC 539
EL +++ + G E S+ + + +RATE EI SA VI T
Sbjct: 314 ELWGIRKSIRDMGHHMRKGGYSERESTRNRILRLKERATELEILINEDLFSSARVIASTL 373
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L F + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 374 VSSNHRILTGRHFSSLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCMEAAR 432
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+GL ++L E++V+ + + L ++QYRMH S+ +FPS FY+G L+ I+ R +D
Sbjct: 433 SGLDRTLMEKVVMNKQEAVSLLKIQYRMHRSIMQFPSAWFYQGELEAAPEISHRGILELD 492
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR----SGVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R + V I
Sbjct: 493 TPINW-IDTSEMDFH-----EEFVGESFGRINKPEANLLLQELENYIRKIGENRVAEECI 546
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ N + N R + I V +VD FQG+E+D I +S VR+NE+
Sbjct: 547 DFGLISPYKAQVQYLRNKIKGNPFFRPYRSR-ITVNTVDGFQGQERDVIFISLVRANENG 605
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
IGFLND RR+NVA+TRAR +VILG+ +SK + L+ +
Sbjct: 606 QIGFLNDLRRMNVAITRARMKLVILGDATTMSKHAFYRKLIEY 648
>gi|423278771|ref|ZP_17257685.1| hypothetical protein HMPREF1203_01902 [Bacteroides fragilis HMW
610]
gi|404585763|gb|EKA90367.1| hypothetical protein HMPREF1203_01902 [Bacteroides fragilis HMW
610]
Length = 656
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 247/463 (53%), Gaps = 43/463 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN +Q AV VL+ + ++++ GPPGTGKT T VY + +
Sbjct: 204 REIYPVRF-----PWLNTTQEEAVNKVLRAKDVAIVHGPPGTGKTTTLVEAVYETLHR-E 257
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 258 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFESHPAYT 313
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREI------SQSADVICCTC 539
EL +++ + G E S+ + + +RATE EI SA VI T
Sbjct: 314 ELWGIRKSIRDMGNHLRKGGYSERESTRNRILRLKERATELEILINEDLFSSARVIASTL 373
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L F + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 374 VSSNHRILTGRHFSTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCMEAAR 432
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+GL ++L E++V+ + + L ++QYRMH S+ +FPS FY+G L+ I+ R +D
Sbjct: 433 SGLDRTLMEKVVMNKQEAVSLLKIQYRMHRSIMQFPSAWFYQGELEAAPEISHRGILELD 492
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR----SGVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R + V I
Sbjct: 493 TPINW-IDTSEMDFH-----EEFVGESFGRINKPEANLLLQELENYIRKIGENRVAEECI 546
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ N + N R I V +VD FQG+E+D I +S VR+NE+
Sbjct: 547 DFGLISPYKAQVQYLRNKIKGNPFFRP-YRNRITVNTVDGFQGQERDVIFISLVRANENG 605
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
IGFLND RR+NVA+TRAR +VILG+ +SK + L+ +
Sbjct: 606 QIGFLNDLRRMNVAITRARMKLVILGDATTMSKHAFYRKLIEY 648
>gi|85001273|ref|XP_955355.1| regulator of nonsense transcripts-related protein [Theileria annulata
strain Ankara]
gi|65303501|emb|CAI75879.1| regulator of nonsense transcripts-related protein, putative
[Theileria annulata]
Length = 1189
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 231/438 (52%), Gaps = 54/438 (12%)
Query: 395 QVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQG-QGQVLVCAPSNVAVDQLAEK 453
Q A S L+ P++LIQGPPGTGKT + AI+ AK ++L A SN+A D L +
Sbjct: 706 QYTATISALKNPLTLIQGPPGTGKTHVACAIIDCWAKLNPNIRILAVADSNIAADNLIDA 765
Query: 454 ISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSD 513
++ ++ +R+ S E+ +++LD + LK + G
Sbjct: 766 LTKKNIQALRIGQSS--------EYELQEESIKNLDRYQ-------TYLKLKMG----GH 806
Query: 514 EKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLV 573
K+ K LK E + ++I TCVG+G+ L+N++F V+IDE +Q+ E LIP+
Sbjct: 807 YKEAKNLKVLLYSEAIKQHNIIIATCVGSGNDLLSNYQFSHVIIDECSQSIEMSNLIPIG 866
Query: 574 LGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSE 632
G K +VL+GDH QL P I+ A + GL +SL ERL+ + P+ L VQ RMHPS+ E
Sbjct: 867 KGCKSLVLIGDHKQLRPTIISNYALKLGLDKSLLERLIQEEVAPVHMLNVQRRMHPSIIE 926
Query: 633 FPSNSFYEGTLQNGVTINERQSSGID-FPWPVPNRPMFFY------------VQMGQEEI 679
FP+ FY + N +N+ S I F WPVP + F + G+ +I
Sbjct: 927 FPNMHFYANKIFNQ-DVNDINRSMIRGFKWPVPFYNLVFIDVSTPSPNTQFEIPQGKSKI 985
Query: 680 SASGT-----SYLNR----------TEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRA 723
+ +YL +E V ++ +FL+S V QIG++TPY+ Q+
Sbjct: 986 NMILIIYIIFNYLQNYLIIYNKKIFSEIKCVIALLNSFLKSNDVKEQQIGILTPYDAQKL 1045
Query: 724 YIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNV 783
I ++ ++ L IEV SVD FQGREKD II S VRSN + IGFL DPRR+NV
Sbjct: 1046 MIKKHLKPLKEVQSHL---IEVDSVDGFQGREKDLIIFSAVRSNMVKDIGFLRDPRRMNV 1102
Query: 784 ALTRARYGIVILGNPKVL 801
LTRAR G+V+LG+ L
Sbjct: 1103 MLTRARRGLVVLGDSHTL 1120
>gi|260831591|ref|XP_002610742.1| hypothetical protein BRAFLDRAFT_90929 [Branchiostoma floridae]
gi|229296110|gb|EEN66752.1| hypothetical protein BRAFLDRAFT_90929 [Branchiostoma floridae]
Length = 3820
Score = 234 bits (598), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 171/512 (33%), Positives = 249/512 (48%), Gaps = 82/512 (16%)
Query: 386 PGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQ--------GQG-- 435
P LN Q AVK + +P +LIQGPPGTGKTVT I Y +A+ G+G
Sbjct: 3281 PAFFPLNQVQELAVKQAISQPFTLIQGPPGTGKTVTGVHIAYFLAEMNKRIQSVSGEGMY 3340
Query: 436 --QVLVCAPSNVAVDQLA---EKISATGLKVVRL---------------------CAKSR 469
QVL C PSN AVD + +KI GLK+VR+ C +
Sbjct: 3341 PPQVLYCGPSNKAVDVVTGYMKKIKG-GLKIVRMYSEMIEREEFPIPNEPVHPNKCKSEK 3399
Query: 470 EA-VSSPVEHLTLHYQVRHLDTSEKSELHKLQQL-KDEQGELSSSDEKKYKA-LKRATER 526
E+ +++ + ++LH+ +R + + L KD ++ +D YK + +A
Sbjct: 3400 ESKITNEHDDVSLHHLIRKPSNPHAETIKAFESLFKDPNYTVTENDITTYKNHIIKAKIH 3459
Query: 527 EISQSADVICCTCVGAGDPRLA-NFRFRQVLIDESTQATEPECLIPLVLGA--------- 576
E+ Q VI CTC A P++ Q ++DE TEPE +P+V GA
Sbjct: 3460 ELRQK-HVILCTCTAAASPKMGMATNIEQCIVDECGMCTEPESFVPIV-GAPVERNGSMT 3517
Query: 577 ----KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
KQV+L+GDH QL P+++ K + + GL SLF+R K L +QYRMH ++
Sbjct: 3518 FHNPKQVILIGDHQQLRPIVLEKTSQQLGLDTSLFQRY---AWKATMLTIQYRMHEAICS 3574
Query: 633 FPSNSFYEGTLQNGVTINER-QSSGIDFPWPV-PNRPMFFYVQMGQEEISASGT------ 684
FPS FYE L+ T+ ER + +D WP NRP F +G+EE+ T
Sbjct: 3575 FPSRMFYENKLRTHRTVIERPRHPALDRLWPGGDNRPTAFCHVVGKEEVQTVATAEGNQM 3634
Query: 685 SYLNRTEAANVEKIVTTFLRS-GVVPSQIGVITPYEGQRAYIVNYMS-RNGALRQQLYKE 742
S N EA K+ +R G+ P + +++ Y Q A I +S L + +
Sbjct: 3635 SRSNEMEADMAVKMAICLVREHGIKPENVILLSQYRAQCALINKKLSSERKRLNDERVER 3694
Query: 743 IEVASVDSFQGREKDYIILSCVRSNE-------------HQGIGFLNDPRRLNVALTRAR 789
+ V SV S QG E DY+I S VRS + +GF+ D ++NVA+TRA+
Sbjct: 3695 VGVNSVVSSQGSEWDYVIFSTVRSLPSYEIEQNPSPSWLRKYLGFIMDQNQVNVAITRAK 3754
Query: 790 YGIVILGNPKVLSKQPLWNGLLTHYKEHECLV 821
G+ ++GN +L LWN L+ HY+E +CLV
Sbjct: 3755 RGLCVIGNKNLLRVHTLWNKLIIHYEEQKCLV 3786
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 227/555 (40%), Gaps = 95/555 (17%)
Query: 311 VALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEV 370
+ L+L + +D++ G + +F + +R+ FAVD + H +
Sbjct: 1543 IYLQLSSRCCQDLDLSSGTTEEFEVR-FQLNRLHFCYMHFAVDNMAA----LHAIFPSRA 1597
Query: 371 EVQMVRNT--LPRRFGAPGLPELNASQVFAVKSVLQR-----PISLIQGPPGTGKTVTSA 423
++ V T LPR+ +LNA Q AV ++ R P ++ GP GTGKT T A
Sbjct: 1598 DMSWVSVTESLPRQVQDT---QLNARQRTAVARIMSRIGDTNPPVVLYGPFGTGKTRTMA 1654
Query: 424 AIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHY 483
+ + +Q VL+ SN A D + T + S ++P L +++
Sbjct: 1655 SAALQILQQPGTNVLIATHSNSAADLYIKDYIHTYVT-------SGHPEATP---LRVYF 1704
Query: 484 QVRHLDTSEKS--ELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVG 541
+ R L+T ++ + KL K+ D ++ VI
Sbjct: 1705 KERRLETVHETVRQYCKLDPNKESFAMPQMDDIMSHRI--------------VIVTLATS 1750
Query: 542 AGDPRLANFR--FRQVLIDESTQATEPECLIPLVLG--AKQVVLVGDHCQLGPVIMCKKA 597
R+ R F +L+DE+ QA E E ++PL L ++VL GDH Q+ P + +A
Sbjct: 1751 MYLIRMGIRRGHFTHILLDEAAQAMECETILPLCLADSTTRIVLSGDHKQMSPKVHSTEA 1810
Query: 598 ARAGLAQSLFERLVLLGLK---------------PIRLQVQYRMHPSLSEFPSNSFYEGT 642
+SL ER+V ++ + L+ YR + F S SFY G
Sbjct: 1811 CDFSFDKSLLERMVQRYIEFGKAKGTTEKAENPFLVMLKDNYRCCEEILRFLSESFYGGL 1870
Query: 643 LQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF 702
G R W P+ F+ G ++ TS+ N E + + V
Sbjct: 1871 KSMGQPRYPR--------W----YPLTFFSAEGDDKTGDYSTSFFNMAEVLEITERVQQL 1918
Query: 703 LRSGVVP------SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREK 756
+ + IGVITPY Q I LRQ+ + V V + QG++
Sbjct: 1919 WKDWPEEWGPPNMADIGVITPYHNQMQLI------RKELRQKRMGGVTVEMVTNIQGKQF 1972
Query: 757 DYIILSCVRS-------NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK----QP 805
+ +S VR+ N+ GFL+D + LN A+TRA+ + ++G+P+ L Q
Sbjct: 1973 RAVFISTVRTRATCDPNNDKNSYGFLSDSKLLNTAMTRAQSLVAVIGDPRALCSRGECQR 2032
Query: 806 LWNGLLTHYKEHECL 820
+W ++ ++++ L
Sbjct: 2033 VWQRFISECEKNKSL 2047
>gi|237720100|ref|ZP_04550581.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450652|gb|EEO56443.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 649
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 240/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 200 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 253
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 309
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 310 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 369
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 370 VSSNHRLLNGRRFSTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEAAR 428
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V L + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 429 GGLDHTLMEKVVQLKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRGILDFD 488
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI 712
P W + M F+ E+ +N+ EA +E + + ++ +I
Sbjct: 489 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELEAYIERIGKERILDERI 542
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + N LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 543 DFGLISPYKAQVQYLRGKIKGNSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 601
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 602 QIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKED 649
>gi|255727729|ref|XP_002548790.1| predicted protein [Candida tropicalis MYA-3404]
gi|240133106|gb|EER32662.1| predicted protein [Candida tropicalis MYA-3404]
Length = 788
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 254/470 (54%), Gaps = 61/470 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQL 450
LN SQ AV + L P++ +QGPPGTGKT IV + + + +LV A SNV+VD +
Sbjct: 322 LNESQRRAVFTSLYNPVTFLQGPPGTGKTSAIYEIVVQLLQSNEYPILVTAASNVSVDNI 381
Query: 451 AEKISATGLK-VVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQ 506
AEK+ + + ++R+ A + A P+ + LH+ V T E+ + KD
Sbjct: 382 AEKLMKSHPETLIRIPATQKLAEYDRKHPLASICLHHMVYDSLTPEQQRIADRLYHKD-- 439
Query: 507 GELSSSDEKKYKALKRATER---EISQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQ 562
++S D+ ++ + A ++ EI + VI T AG ++ + + R VLIDE+TQ
Sbjct: 440 --VASIDKCEFDSFCNARKKKSMEILSAHKVIFATTTVAGGGQIKSLPQVRVVLIDEATQ 497
Query: 563 ATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KPIR 619
+ EP LIPL L K+VV+VGD QL + K L+ S+FERL+L P+
Sbjct: 498 SAEPATLIPLALPRLKKVVVVGDDKQLSCLSEIK-----SLSMSMFERLLLNNTCANPLM 552
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMG---- 675
L QYRMHP +SEFP F +G L +G++ +ERQ GI P++F+ G
Sbjct: 553 LDTQYRMHPQISEFPRLQFCKGKLTDGISSSERQEIGI-------THPLYFWDTDGDAPE 605
Query: 676 ----QEEISASGTSYLNRTEAANVEKIVTTFLRSGVV-PSQIGVITPYEGQRAYIVNYMS 730
++ + G +Y+N E A V+ ++ T ++ + PS+IGVIT Y GQR I + +
Sbjct: 606 SPIQNKKKADKGFTYVNPFEVAYVQSVLRTLIQDKKINPSRIGVITSYAGQRDVISSNLL 665
Query: 731 RNGALR---QQLYKEIE---------------------VASVDSFQGREKDYIILSCVRS 766
++ + ++L +E++ +A+VD+FQGREKD I++SCVRS
Sbjct: 666 QDRIINPDAEKLKQEVDLVNQRVRSAKGATINFVAGIMIATVDAFQGREKDIIVMSCVRS 725
Query: 767 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ-PLWNGLLTHYK 815
N IGFL D RRLNV+LTRA+Y ++++G+ + L ++ +W K
Sbjct: 726 NVDGSIGFLKDERRLNVSLTRAKYSMILIGDVECLKRRGKVWRNYFEFLK 775
>gi|242062790|ref|XP_002452684.1| hypothetical protein SORBIDRAFT_04g030630 [Sorghum bicolor]
gi|241932515|gb|EES05660.1| hypothetical protein SORBIDRAFT_04g030630 [Sorghum bicolor]
Length = 981
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 279/559 (49%), Gaps = 77/559 (13%)
Query: 321 VPVDINHG---FSVDFVWKSTSFDRMQGAMKTF---------------AVDETSVSGYIY 362
V ++ HG FS F KS DR+QG + + E +VS +
Sbjct: 410 VALESRHGDATFSRLF-GKSVRIDRIQGLADSLRYKRNLEALMLLERNGLQEDNVSIAVV 468
Query: 363 HHLLGHEVEV-QMVRNTLPRRFGAPGLPELN--------ASQVFAVKSVL--QRPISLIQ 411
L G +V +M +N L + G P+LN ASQ+ A+K L +RP+ +IQ
Sbjct: 469 ATLFGDSKDVVKMAKNNLTDWDESSG-PDLNLSERYAYDASQLRALKLGLNKKRPVLIIQ 527
Query: 412 GPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA 471
GPPGTGKTV ++ KQG+ +VLV APSN AVD++ E +S TGL +VR+ R +
Sbjct: 528 GPPGTGKTVLLTELIVRAVKQGE-RVLVTAPSNAAVDKMVESLSRTGLNIVRVGNPVRLS 586
Query: 472 --VSSPVEHLTLHYQVRHLDTS---EKSELHKLQQLKDEQGELSSSDEKKYKAL------ 520
V+S ++ ++R ++++L K + E L++ + K L
Sbjct: 587 PFVASKSLGEIVNCRLRQFRKELERKRTDLRKDLRQCIEDDSLAAGIRQLLKQLGKDLEN 646
Query: 521 -KRATEREISQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQATEPECLIPLVLGAKQ 578
++ T RE+ A V+ T GA DP + F V+IDE+ QA EP C IP++ G K+
Sbjct: 647 KEKETIREVLSDAQVVLSTNTGAADPLVRRTGSFDLVIIDEAGQAIEPACWIPILQG-KR 705
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSN 636
+L GDHCQL PV++ +KA GL +SL E L GL RL VQYRMH S++ + S
Sbjct: 706 CILAGDHCQLAPVVLSRKALDGGLGKSLLETASSLHDGLLTTRLTVQYRMHDSIAMWASK 765
Query: 637 SFYEGTLQNGVTINER---QSSGIDFPWPVPNRPMFFY--------VQMG-QEEISASGT 684
Y G L++ + S + W + P+ + +G +E + +GT
Sbjct: 766 EMYHGLLKSSDLVASHLLADSPVVKATW-ITRCPLLLLDTRMPNGALNIGCKEHLDPAGT 824
Query: 685 -SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE- 742
S+ N EA V + V + GV PS I V +PY Q LR++L +
Sbjct: 825 GSFYNEGEADIVTQQVLNLVHCGVSPSTIVVQSPYIAQVQL----------LREKLQEYP 874
Query: 743 ----IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNP 798
+EV+++DSFQGRE D +I+S VRSN +GFL D RR+NVA+TRAR + ++ +
Sbjct: 875 GLCPVEVSTIDSFQGREADAVIISMVRSNPLGAVGFLGDSRRINVAITRARKHVTVVCDT 934
Query: 799 KVLSKQPLWNGLLTHYKEH 817
+ LL H + +
Sbjct: 935 STICHSTFLARLLRHIRRY 953
>gi|86451930|gb|ABC97360.1| UPF1 [Streblomastix strix]
Length = 277
Score = 233 bits (595), Expect = 4e-58, Method: Composition-based stats.
Identities = 118/241 (48%), Positives = 157/241 (65%), Gaps = 21/241 (8%)
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID----------FPWPVPNRPMF 669
LQ+QYRMHP +++F S FY+G L +GV +RQ I FPWP P P+
Sbjct: 11 LQIQYRMHPEIAKFASEQFYKGLLIDGVNAEQRQYRIITKCGQQIIKQVFPWPNPKCPIM 70
Query: 670 FYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV--- 726
F +E+ GTSYLN TEA +VEKI+T L +GV IG+ITPY+ Q + I+
Sbjct: 71 FVNSTNEEK--KLGTSYLNNTEANHVEKILTHLLINGVKAKDIGIITPYKLQISCIIDQF 128
Query: 727 -----NYMSRNG-ALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
N S+NG L + Y++++VASVD+FQGREKD+II SCVRSNE +GIGFLNDPRR
Sbjct: 129 KRVADNSQSQNGRGLPYETYQDVQVASVDAFQGREKDFIIFSCVRSNERKGIGFLNDPRR 188
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 840
LNVA+TRARYG++I+GN K L PLWN LL H +E C+++G NN K++ + + +
Sbjct: 189 LNVAITRARYGLIIIGNAKCLFSYPLWNNLLVHLQEKHCIIKGQFNNYKEAEIVLKTKMQ 248
Query: 841 I 841
I
Sbjct: 249 I 249
>gi|427385832|ref|ZP_18882139.1| hypothetical protein HMPREF9447_03172 [Bacteroides oleiciplenus YIT
12058]
gi|425726871|gb|EKU89734.1| hypothetical protein HMPREF9447_03172 [Bacteroides oleiciplenus YIT
12058]
Length = 629
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 248/468 (52%), Gaps = 48/468 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 179 RELYPVRF-----PWLNSTQETAVNKVLCSRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 232
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 233 PQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFESHPSYT 288
Query: 495 ELHKLQQ-LKDEQGELSSSDEKKYKALKR-------ATEREISQSAD------VICCTCV 540
EL +++ +++ G S E++ A R AT+ EI +AD VI T V
Sbjct: 289 ELWGIRKAMREMNGRRRGSYEERESARNRLSRLRDRATQLEIQINADLFDSAHVIASTLV 348
Query: 541 GAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
+ L RF + IDE+ QA E C I + A ++VL GDHCQL I C +AARA
Sbjct: 349 SSNHRVLNGRRFGTLFIDEAAQALEAACWIA-IRKADRIVLAGDHCQLPATIKCYEAARA 407
Query: 601 GLAQSLFERLVLLGLKPI---RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
GL +L ER+V KP L++QYRM+ ++ FPS FY+G L+ I R
Sbjct: 408 GLEHTLMERIV--TTKPTVVSLLKIQYRMNEAIMHFPSQWFYDGQLEAAPEIRHRGILDW 465
Query: 658 DFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL-RSG---VVPSQ 711
D P W + M F +EE +NR EA + K + ++ R G ++ +
Sbjct: 466 DTPITW-IDTSEMEF-----KEEFVGETFGRINREEAHLLLKELEAYIQRIGGHRILDER 519
Query: 712 I--GVITPYEGQRAYIVNYMSRNGALRQQLYKEI-EVASVDSFQGREKDYIILSCVRSNE 768
I G+I+PY+ Q Y+ N + + ALR Y+ + V +VD FQG+E+D + +S VR+NE
Sbjct: 520 IDFGIISPYKAQVQYLRNKIKTSAALRP--YRSLLTVNTVDGFQGQERDVVFISLVRANE 577
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
IGFLND RR+NVA+TRAR +VILG L ++ L+ + E
Sbjct: 578 EGQIGFLNDLRRMNVAITRARMKLVILGEANTLKHHKFYHKLIEYINE 625
>gi|359405877|ref|ZP_09198604.1| putative DNA helicase [Prevotella stercorea DSM 18206]
gi|357557227|gb|EHJ38779.1| putative DNA helicase [Prevotella stercorea DSM 18206]
Length = 622
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 247/451 (54%), Gaps = 39/451 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
FGA LP LNASQ AV VL+ + ++++ GPPGTGKT T +Y ++ + QVLVCA
Sbjct: 178 FGAMSLPWLNASQQQAVNEVLRAKDVAVVHGPPGTGKTTTLVEAIYETLRR-ESQVLVCA 236
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 501
SN+AVD +AEK+ G+ V+R+ +R V+ + L+ Y+ R + +L +++
Sbjct: 237 QSNMAVDWIAEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFEAHPDYPQLWSIRK 292
Query: 502 -LKDEQGELSSSD--EKKYKALK-RATEREISQSAD------VICCTCVGAGDPRLANFR 551
+++ +GE SD +K LK RATE E+ A VI CT GA + L +
Sbjct: 293 AIRELRGERRRSDAWHQKMDRLKSRATEIELRIRASLFGEARVIACTLTGAANRVLEGEK 352
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F + IDE+ QA E C I + A +V+ GDHCQL P + A + GL +L ER+V
Sbjct: 353 FSTLFIDEAAQALEAACWIA-IRRAGRVIFAGDHCQLPPTVKSIMALKGGLGITLMERIV 411
Query: 612 LLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
KP L+VQYRM+ + F S+ FY G +Q I R S +D+ +RPM
Sbjct: 412 --KAKPDVVTLLKVQYRMNEQIMRFSSDWFYGGEVQTAPGIERR--SILDY-----DRPM 462
Query: 669 FFY---VQMGQEEISASGTSYLNRTEAA-NVEKIVTTFLRSG---VVPSQI--GVITPYE 719
+ G+EE +NRTEA ++ + F + G ++ I G+I+PY
Sbjct: 463 MWVDTSEAEGKEEFVGENFGRINRTEAELTLQTLQQYFEKIGKQRILDEHIDVGIISPYR 522
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
Q +++ M R + + I V +VD FQG+E+D I++S VR+N+ + IGFL D R
Sbjct: 523 AQ-VQLLHKMIRQSEFFRPYRRAISVNTVDGFQGQERDIIVISLVRNNDGKEIGFLRDLR 581
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
R+NVA+TRAR ++ILG+ ++ P + L
Sbjct: 582 RMNVAITRARMKLIILGSAATMTAHPFYKKL 612
>gi|71012553|ref|XP_758509.1| hypothetical protein UM02362.1 [Ustilago maydis 521]
gi|46098167|gb|EAK83400.1| hypothetical protein UM02362.1 [Ustilago maydis 521]
Length = 1604
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 250/511 (48%), Gaps = 96/511 (18%)
Query: 388 LPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCAPSNV 445
LP+LN++Q AV +L+ +SLIQGPPGTGKT T + + + Q +++ A +NV
Sbjct: 1018 LPDLNSTQTQAVAMMLRERVSLIQGPPGTGKTRTIVTAIKLLKQDFQVPHPIMLAAHTNV 1077
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLH-YQVRH-----LDTSEKSELHKL 499
AVD LA+ GL+VVR+ +R + ++ TL Y +RH LD K +L L
Sbjct: 1078 AVDNLADGCIKAGLRVVRIGPSAR--ARAGIDQYTLDAYFLRHPAKQRLDQI-KRQLDTL 1134
Query: 500 QQLKD--EQGELSSS--------------DE----------------------------- 514
+LK E G + S DE
Sbjct: 1135 DRLKSEYELGRMGGSDPCIASSVRERLAEDEAIGQTEAQSWENMMAEREEEREAAQPKGG 1194
Query: 515 ---KKYKALKRATER--------------EISQSADVICCTCVGAGDPRLANFRFRQVLI 557
++Y+ +K+ R EI DVIC + + AG P L V
Sbjct: 1195 TASEEYETIKKQLNRLKATYFFLRASIRGEILNGVDVICGSAIAAGSPELDMIDLPVVFF 1254
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV--LLGL 615
DE++ ATEP L+PL+ G + + ++GDH QL PV+ +A +AGL++SLFERL+ +
Sbjct: 1255 DEASMATEPVSLVPLMKGCRHLSIIGDHKQLPPVVTSAEAKKAGLSRSLFERLIQSRSSI 1314
Query: 616 KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV-------PNRPM 668
I L VQ+RMHP+L+EF + +FY+G LQNG T E + WP + +
Sbjct: 1315 PSIMLNVQFRMHPTLAEFANQTFYDGALQNG-TGTELIAPVASSYWPSCAGVAKQDTQRL 1373
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG--VVPSQIGVITPYEGQRAYIV 726
F G+E + + +S N +EA V +VT LR + IGV+TPY GQ+ +
Sbjct: 1374 CFIDHKGRETKAENSSSLRNASEARIVLDVVTDLLRQNPDLTGDDIGVVTPYAGQQVLLE 1433
Query: 727 NYMSRNGAL-RQQL----------YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
+ +L RQQ I+V +VD F+GREK I+ S VR+N +GFL
Sbjct: 1434 KMLHNEASLSRQQAAGILGTRSSELGNIDVHTVDGFEGREKKVILFSTVRTNAQGYVGFL 1493
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
D RRLNVALTRA+ + ++GN L + L
Sbjct: 1494 ADGRRLNVALTRAQSALFLIGNIDTLKRAQL 1524
>gi|406604174|emb|CCH44397.1| putative ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 1153
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 239/473 (50%), Gaps = 57/473 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQ 449
N SQ A++ VL I+++QGPPGTGKT T I+ + + + +LV A SN+A+D
Sbjct: 689 FNDSQKEAIQHVLNNAITVLQGPPGTGKTSTIYEIILQLFRNLKTWPILVVAASNIAIDN 748
Query: 450 LAEKISATG-LKVVRLCAKSREAVSSPVEHL---TLHYQVRHLDTSEKSELHKLQQLKDE 505
+AEK+ A L ++R+ + +E + HL LH Q+ + ++ L+
Sbjct: 749 IAEKLKADDDLNILRIVSTEKEKEYNEKHHLYDVCLHQQIFQRLPEQNKQI--ALDLRYN 806
Query: 506 QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDESTQAT 564
+ +S + KK ++ + ++ A VI T V AG +L N + V++DESTQ++
Sbjct: 807 RKPVSQNQYKKLLTIQNSIIEKLVAQAQVILTTSVVAGGYQLKNLKKLPVVIMDESTQSS 866
Query: 565 EPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KPIRLQ 621
E LIPL + G + V VGD QL + L QSLFER++ G P L
Sbjct: 867 EATSLIPLSMPGVDKFVFVGDDKQLSSF-----SEVPYLEQSLFERVLNNGTYRNPHMLN 921
Query: 622 VQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFF--YVQMGQE-- 677
VQYRMHP +SEFP FY L NGVT +R GI+ P+ F Y + QE
Sbjct: 922 VQYRMHPKISEFPIKRFYRNLLSNGVTEEDRFIEGIN--------PLVFVDYGSIHQESK 973
Query: 678 -----EISASGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGVITPYEGQRAYIVNYMSR 731
+ G ++ N EA + KI+ + + I VITPY QR + +
Sbjct: 974 VSNFKRFNGGGYTFTNHGEAKLILKILKDLIFTKNINKEDISVITPYSAQRDLLATTFQK 1033
Query: 732 NGALRQ----------------------QLYKEIEVASVDSFQGREKDYIILSCVRSNEH 769
+ + + I V+S+D+FQGREK++II SCVRSNE
Sbjct: 1034 DDLINPNNEDIEEEVDEDSLTNKKPTTIKTICNIMVSSIDAFQGREKNFIIFSCVRSNEE 1093
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLS-KQPLWNGLLTHYKEHECLV 821
IGF+ D RRLNVALTRAR G++++GN + +S PLW L H + ++ +V
Sbjct: 1094 SKIGFVKDERRLNVALTRARNGLILVGNKQCMSLGDPLWKELTDHLESNDSIV 1146
>gi|373958634|ref|ZP_09618594.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
gi|373895234|gb|EHQ31131.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
Length = 636
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 170/529 (32%), Positives = 269/529 (50%), Gaps = 63/529 (11%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAV-DETSVSGYIYHHLLGHEVEVQMVRNTLPRRFG 384
N +D ++ S+D MQ A+K +V E + G + L G E + T
Sbjct: 119 NGKLGIDLLFDDNSYDEMQNALKQASVLSEKAGEGRLVKVLTGAE------QPTFSAPLL 172
Query: 385 APGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 443
P L LN SQ AV+ ++ + ++++ GPPGTGKT T + + QG+ Q+LV APS
Sbjct: 173 LPKLTGLNPSQQAAVEKIVSAQDLAIVHGPPGTGKTTTLVQAIKSLISQGEKQLLVVAPS 232
Query: 444 NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLK 503
N AVD L+EK++ GL V+R+ +R VS + LTL ++ +E + +++LK
Sbjct: 233 NTAVDLLSEKLAGEGLNVLRIGNPAR--VSDRLMSLTLDSKM-----AEHGRMKDIKKLK 285
Query: 504 DEQGELSSSDEKKYKALKRA---------------------TEREISQS----ADVICCT 538
+ E + K ++ +A TE+ I A VI T
Sbjct: 286 KQAAEFKNMAHKYKRSFGKAERDQRKALFDEAHKIMKDVGKTEQYIIDDLVGRAQVITAT 345
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
VG+ + +F V+IDE+ QA EP C IP +L A++V+L GDH QL P I KAA
Sbjct: 346 LVGSNHYTIRGLQFNTVVIDEAGQALEPACWIP-ILKAQKVILAGDHFQLSPTIKSAKAA 404
Query: 599 RAGLAQSLFERLVLLGLKPI-RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
GL+ +L E+ + L + + L+ QYRM+ ++ + S FY+ LQ ++ +R
Sbjct: 405 HDGLSNTLLEKCITLHPEAVVLLEEQYRMNEAIMTYSSQVFYQNKLQAHASVAQRLLFTA 464
Query: 658 DFPWPVPNRPMFFYVQM---GQEEISASGTSYLNRTEAA----NVEKIVTTFLRSGVVPS 710
D P F YV G +E GTS N EA ++EK+VT +
Sbjct: 465 DAP--------FSYVDTAGCGFDE-KPEGTSMANAEEAGFLFKHLEKLVTELNEHYTTEN 515
Query: 711 --QIGVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSN 767
I +++PY+ Q + + L QLY++ I V ++DSFQG+E+D + +S RSN
Sbjct: 516 FPTIAIVSPYKEQIRLLKDQQQHWPGL--QLYQDKISVNTIDSFQGQERDIVYISMTRSN 573
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
IGFL+D RR+NVA+TRAR ++I+G+ L++ P + ++ + ++
Sbjct: 574 TKGEIGFLSDIRRMNVAMTRARKKLIIIGDSSTLAQAPFYADMIKYAEQ 622
>gi|319903097|ref|YP_004162825.1| helicase [Bacteroides helcogenes P 36-108]
gi|319418128|gb|ADV45239.1| putative helicase [Bacteroides helcogenes P 36-108]
Length = 651
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 248/470 (52%), Gaps = 49/470 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LNA+Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 180 RELYPVRF-----PWLNATQESAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHR-E 233
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QV+VCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R S +
Sbjct: 234 PQVMVCAQSNTAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFESHSLYT 289
Query: 495 ELHKL-QQLKDEQGELS--SSDEK------------KYKALKRATEREISQSADVICCTC 539
EL + Q+L+ QG+ S DE+ + AL+ E+ SA VI T
Sbjct: 290 ELWSIRQELRQLQGKTRRGSYDEREGVRSRISRLRDRATALELQINAELFDSAHVIASTL 349
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
VG+ L+ RF + IDE+ QA E C I + A +V+L GDHCQL P + C +AAR
Sbjct: 350 VGSNHRLLSGHRFGTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTVKCPEAAR 408
Query: 600 AGLAQSLFERLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
GL ++L E + KP L++QYRMH + F S FY G L+ + R
Sbjct: 409 GGLERTLME--TVAAAKPTAVSLLKMQYRMHEDIMRFSSEWFYNGELKAAPEVRHRGILD 466
Query: 657 IDFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA-ANVEKIVTTFLRSG---VVPS 710
D P W + M F +EE +N+ EA ++++ LR G ++
Sbjct: 467 WDTPICW-IDTSEMNF-----KEEFVGETFGRINKEEANLLLQELEAYILRIGGKRILEE 520
Query: 711 QI--GVITPYEGQRAYIVNYMSRNGALRQQLYKEI-EVASVDSFQGREKDYIILSCVRSN 767
QI G+I+PY+ Q ++ N + + ALR Y+ + V +VD FQG+E+D I +S VR+N
Sbjct: 521 QIDFGLISPYKAQVQHLRNKIKTSAALRP--YRSLLTVNTVDGFQGQERDVIFISLVRAN 578
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
E IGFL+D RR+NVA+TRAR +VILG L++ + L+ + KE
Sbjct: 579 EDGQIGFLHDLRRMNVAITRARMKLVILGEADTLNRHAFYKKLMEYIKEQ 628
>gi|321256931|ref|XP_003193410.1| DNA helicase [Cryptococcus gattii WM276]
gi|317459880|gb|ADV21623.1| DNA helicase, putative [Cryptococcus gattii WM276]
Length = 954
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 249/491 (50%), Gaps = 56/491 (11%)
Query: 355 TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
T + + H G E+ V++ G P +P LN +Q+ A+ +L +SL+QGPP
Sbjct: 434 TLIRSWAERHRSGREIPVEVE--------GDPHVP-LNRTQLRAMGMMLTEALSLVQGPP 484
Query: 415 GTGKTVTSAAIVYHMAKQGQ--GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAV 472
GTGKT + + Q +LVCA +NVAVD L + G+K +R R V
Sbjct: 485 GTGKTRVIVETIKLLKHHFQIPHPILVCAHTNVAVDNLLAGMVKHGVKAIRTGTAER--V 542
Query: 473 SSPVEHLTLHYQVRH--LDTSEKSELHKLQQLKDEQGELSSSD-EKKYKAL--------- 520
+ ++ TL ++ + S +S K ++LKDE + + E++ K L
Sbjct: 543 PAELKQYTLEIKMESHPMWISVQSMTEKAKRLKDEIFRMDFDNPERQQKNLEMKKIWRQI 602
Query: 521 ---KRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAK 577
++ RE+ ADV+C TC+ A L + F V +DE++ ATEP L+PL+ G+
Sbjct: 603 WGIQQIINRELLLDADVVCTTCISAISANLNSIDFPIVFLDEASMATEPLTLLPLMKGSS 662
Query: 578 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP-IRLQVQYRMHPSLSEFPSN 636
V ++GDH QL PVI+ A GL+ SLFERL+ P I L QYRMHPSL+ F S
Sbjct: 663 HVAIIGDHKQLPPVIVSGDAHAGGLSTSLFERLIHEKDVPSIMLDTQYRMHPSLAAFSSK 722
Query: 637 SFYEGTLQNGVTINERQSSGIDFPW---PVPNRPMFFYVQMGQEEISASGT--------- 684
+FY L+NG +ER F P+P+ P +++ E+ + +
Sbjct: 723 TFYSSLLKNGTAASERPPPETAFLIPEDPIPD-PSTGELRLSGEKTNLTFLNHSHPESPV 781
Query: 685 --SYLNRTEAANVEKIVTTFLRSG--VVPSQIGVITPYEGQRAYIVNYMSRNGAL----- 735
S N EA + ++T L + SQIG+I PY GQ + + +G
Sbjct: 782 LQSMANEGEAEIIVDVITDLLHKNPDLKGSQIGIIAPYLGQIKVLSETLFASGTQDSLKK 841
Query: 736 -----RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARY 790
R + +++E+ +VD F+GREK+ II S VRSN IGFL D RR+NV LTRAR
Sbjct: 842 ILGDERTEEVQDVEIKTVDGFEGREKEVIIFSTVRSNPGGYIGFLGDWRRVNVGLTRARR 901
Query: 791 GIVILGNPKVL 801
++++GN + L
Sbjct: 902 ALIMVGNKETL 912
>gi|134115759|ref|XP_773593.1| hypothetical protein CNBI2070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256219|gb|EAL18946.1| hypothetical protein CNBI2070 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 952
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 237/462 (51%), Gaps = 44/462 (9%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCA 441
G P +P LN +Q+ A+ +L +SL+QGPPGTGKT + + Q +LVCA
Sbjct: 453 GDPYVP-LNRTQLRAMGMMLSEALSLVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVCA 511
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 501
+NVAVD L + G+K +R R L + + + T ++ K ++
Sbjct: 512 HTNVAVDNLLAGMVKHGVKAIRTGMAERVPTDLKQYTLGIKMESHPMWTCVQTMTEKTKR 571
Query: 502 LKDEQGELS---------SSDEKKYK----ALKRATEREISQSADVICCTCVGAGDPRLA 548
LKDE L SS+ KK ++++ RE+ ADV+C TC+ A L
Sbjct: 572 LKDEIFRLDFGNPERQQKSSELKKIWRQIWGIQQSITRELLLDADVVCTTCISAISANLN 631
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
+ F V +DE++ ATEP L+PL+ G+ V ++GDH QL PVI+ + A GL+ SLFE
Sbjct: 632 SIDFPIVFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFE 691
Query: 609 RLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW---PVP 664
RL+ P I L QYRMHPSL+ F S +FY L+NG +ER F P+P
Sbjct: 692 RLIHEKNVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTPASERPPPETAFLIPEDPIP 751
Query: 665 NRPMFFYVQMGQEEISASGT-----------SYLNRTEAANVEKIVTTFLRSG--VVPSQ 711
+ P +++ E+ + + S N EA + +VT L + SQ
Sbjct: 752 D-PSTGELRLSGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPDLKGSQ 810
Query: 712 IGVITPYEGQRAYIVNYMSRN----------GALRQQLYKEIEVASVDSFQGREKDYIIL 761
IG+I PY GQ + + + G R + +++E+ +VD F+GREK+ II
Sbjct: 811 IGIIAPYLGQIKVLSETLFASETQDSLKRILGDERTEEIQDVEIKTVDGFEGREKEVIIF 870
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
S VRSN IGFL D RR+NV LTRAR ++++GN + L +
Sbjct: 871 STVRSNAGGYIGFLGDWRRVNVGLTRARRALIMVGNKETLKR 912
>gi|58261218|ref|XP_568019.1| DNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57230101|gb|AAW46502.1| DNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 952
Score = 232 bits (591), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 237/462 (51%), Gaps = 44/462 (9%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCA 441
G P +P LN +Q+ A+ +L +SL+QGPPGTGKT + + Q +LVCA
Sbjct: 453 GDPYVP-LNRTQLRAMGMMLSEALSLVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVCA 511
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 501
+NVAVD L + G+K +R R L + + + T ++ K ++
Sbjct: 512 HTNVAVDNLLAGMVKHGVKAIRTGMAERVPTDLKQYTLGIKMESHPMWTCVQTMTEKTKR 571
Query: 502 LKDEQGELS---------SSDEKKYK----ALKRATEREISQSADVICCTCVGAGDPRLA 548
LKDE L SS+ KK ++++ RE+ ADV+C TC+ A L
Sbjct: 572 LKDEIFRLDFGNPERQQKSSELKKIWRQIWGIQQSITRELLLDADVVCTTCISAISANLN 631
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
+ F V +DE++ ATEP L+PL+ G+ V ++GDH QL PVI+ + A GL+ SLFE
Sbjct: 632 SIDFPIVFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFE 691
Query: 609 RLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW---PVP 664
RL+ P I L QYRMHPSL+ F S +FY L+NG +ER F P+P
Sbjct: 692 RLIHEKNVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTPASERPPPETAFLIPEDPIP 751
Query: 665 NRPMFFYVQMGQEEISASGT-----------SYLNRTEAANVEKIVTTFLRSG--VVPSQ 711
+ P +++ E+ + + S N EA + +VT L + SQ
Sbjct: 752 D-PSTGELRLWGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPDLKGSQ 810
Query: 712 IGVITPYEGQRAYIVNYMSRN----------GALRQQLYKEIEVASVDSFQGREKDYIIL 761
IG+I PY GQ + + + G R + +++E+ +VD F+GREK+ II
Sbjct: 811 IGIIAPYLGQIKVLSETLFASETQDSLKRILGDERTEEIQDVEIKTVDGFEGREKEVIIF 870
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
S VRSN IGFL D RR+NV LTRAR ++++GN + L +
Sbjct: 871 STVRSNAGGYIGFLGDWRRVNVGLTRARRALIMVGNKETLKR 912
>gi|423260347|ref|ZP_17241269.1| hypothetical protein HMPREF1055_03546 [Bacteroides fragilis
CL07T00C01]
gi|423266481|ref|ZP_17245483.1| hypothetical protein HMPREF1056_03170 [Bacteroides fragilis
CL07T12C05]
gi|387775493|gb|EIK37600.1| hypothetical protein HMPREF1055_03546 [Bacteroides fragilis
CL07T00C01]
gi|392701058|gb|EIY94219.1| hypothetical protein HMPREF1056_03170 [Bacteroides fragilis
CL07T12C05]
Length = 634
Score = 232 bits (591), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 246/470 (52%), Gaps = 53/470 (11%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R T P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RATYPVRF-----PWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFEGHPAYT 291
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E ++ + +RATE EI + D VI T
Sbjct: 292 ELWGIRKSIREMGNRMRKSSYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L +RF + IDE+ QA E C I + A +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILTGWRFTTLFIDEAAQALEAACWIA-IRKADRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL Q+L E++ + + L +VQYRMH S+ +F S FY+G LQ + R +D
Sbjct: 411 NGLEQTLMEKVAANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLD 470
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS----GVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R V+ +I
Sbjct: 471 LPMSW-IDTSEMEFH-----EEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERI 524
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLY-----KEIEVASVDSFQGREKDYIILSCVR 765
G+I+PY+ Q Y+ G L+ L+ +I + +VD FQG+E+D I +S VR
Sbjct: 525 DFGLISPYKAQVQYL------RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVR 578
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+NE IGFLND RR+NVA+TRAR +VILG+ +SK + L+ + +
Sbjct: 579 ANEDGQIGFLNDLRRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|237708745|ref|ZP_04539226.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|423228836|ref|ZP_17215242.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei
CL02T00C15]
gi|423247648|ref|ZP_17228696.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei
CL02T12C06]
gi|229457171|gb|EEO62892.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392631541|gb|EIY25512.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei
CL02T12C06]
gi|392635575|gb|EIY29474.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei
CL02T00C15]
Length = 630
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 242/456 (53%), Gaps = 40/456 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
FG P LN SQ AV V+ + ++++ GPPGTGKT T +Y + + QV+VCA
Sbjct: 184 FGFTRFPWLNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCA 242
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R H D + + K
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFESHPDYPQLWSIRK 298
Query: 499 -LQQL--KDEQGELSSSDEKKYKALK-RATEREIS------QSADVICCTCVGAGDPRLA 548
+++L + +G + K +LK RATE EI A VI CT V + + L
Sbjct: 299 AIRELYSRSRKGAERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVLT 358
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
RF + IDE+ QA EP C I + A ++VL GDHCQL P I C +AAR GL Q+L +
Sbjct: 359 GRRFGTLFIDEAAQALEPACWIA-IRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQ 417
Query: 609 RLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
+V + + L +VQYRM+ + F S FY+G L++ + R D P N
Sbjct: 418 EIVQNKPETVSLLKVQYRMNDEIMHFSSEWFYQGELKSAPEVKYRGILDYDTPIEWVNTE 477
Query: 668 MFFYVQMGQEEISASGTSYLNRTEAA--------NVEKI-VTTFLRSGVVPSQIGVITPY 718
Y EE +N+ EAA + KI FL + +G+I+PY
Sbjct: 478 GMNY----NEEFVGESFGRINKAEAALSISQLTHYINKIGKERFLEERI---DVGLISPY 530
Query: 719 EGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
+ Q Y+ + R+ + Y+ I + +VD FQG+E+D I++S VR+NE IGFLND
Sbjct: 531 KAQVQYLRQLIKRDAFFKP--YRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLND 588
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
RR+NVA+TRAR ++ILG+ L+K P + L +
Sbjct: 589 LRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|299147977|ref|ZP_07041040.1| putative DNA helicase [Bacteroides sp. 3_1_23]
gi|298514160|gb|EFI38046.1| putative DNA helicase [Bacteroides sp. 3_1_23]
Length = 649
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 239/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 200 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 253
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 309
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + RATE EI +AD VI T
Sbjct: 310 ELWGIRKSIREMGSRMRRGSYSEREGMRNRISHLRDRATELEIQINADLFDSARVIASTL 369
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 370 VSSNHRLLNGRRFSTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEAAR 428
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V L + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 429 GGLDHTLMEKVVQLKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRGILDFD 488
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI 712
P W + M F+ E+ +N+ EA +E + + ++ +I
Sbjct: 489 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELEAYIERIGKERILDERI 542
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + N LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 543 DFGLISPYKAQVQYLRGKIKGNSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 601
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 602 QIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKED 649
>gi|256421450|ref|YP_003122103.1| ATPase AAA [Chitinophaga pinensis DSM 2588]
gi|256036358|gb|ACU59902.1| AAA ATPase [Chitinophaga pinensis DSM 2588]
Length = 635
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 279/563 (49%), Gaps = 61/563 (10%)
Query: 294 PAWQSVGHVIKLTAQEEVALELRASQGVPVDINHG-FSVDFVWKSTSFDRMQGAMKTF-A 351
P V I ++ + LR + +P N+G +D ++ S+D MQ A+K
Sbjct: 87 PKTDRVEGTISYQGGNKLKITLRTDE-LPEWANNGKLGIDLLFDDNSYDEMQNALKQADT 145
Query: 352 VDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQ-RPISLI 410
+ E + ++ L G + + LP +P LNASQ AV +L ++++
Sbjct: 146 LAEKGENDHLIRVLTGEKSP--GFHDNLPPVI----IPRLNASQQHAVNRILAANDLAIV 199
Query: 411 QGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSRE 470
GPPGTGKT T + + KQ Q+LV APSN AVD L+EK+S GL V+R+ +R
Sbjct: 200 HGPPGTGKTTTLVQAIKALIKQDNKQILVVAPSNTAVDLLSEKLSEEGLNVLRVGNPAR- 258
Query: 471 AVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE--- 527
VS + LTL ++ +E + + ++++LK + E K + +A ERE
Sbjct: 259 -VSERLSSLTLDSRM-----TEHASMKEIKRLKKQANEFRDMAHKYKRNFGKA-EREQRK 311
Query: 528 -----------------------ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT 564
+ A +I T VGA + ++ ++IDE+ QA
Sbjct: 312 ALFDEARNIMKSVENTEQYIMDDLMAKAQIITATLVGANHYTVRKLKYHTIVIDEAGQAL 371
Query: 565 EPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPI-RLQVQ 623
EP C IP +L A++V+L GDHCQL P + +AAR GL+ +L E+ + L + + L+ Q
Sbjct: 372 EPACWIP-ILKAQKVILAGDHCQLSPTVKSDEAARKGLSTTLLEKCIALHPESVVLLEEQ 430
Query: 624 YRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMG-QEEISAS 682
YRMH + + S FY L+ ++ ++ FP + P+ F G +
Sbjct: 431 YRMHEMIMGYSSAVFYADKLKAHASV----AAHTLFP---DDMPLSFVDTAGCGFDEKTE 483
Query: 683 GTSYLNRTEAANVEKIVTTF---LRSGVVPSQ---IGVITPYEGQRAYIVNYMSRNGALR 736
GTS N EAA + K + F L + P Q I +I+PY+ Q+ +I+ +
Sbjct: 484 GTSTTNPEEAAFLFKHLRQFVTGLHTHYQPQQFPSIAIISPYK-QQIHILKEQLLSVPEL 542
Query: 737 QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILG 796
Q I V ++DSFQG+E+D + +S RSN IGFL+D RR+NVA+TRAR +VI+G
Sbjct: 543 QAYGDRISVNTIDSFQGQERDIVYISMTRSNNDNKIGFLSDIRRMNVAMTRARKKLVIIG 602
Query: 797 NPKVLSKQPLWNGLLTHYKEHEC 819
+ LS+ P + G + + ++
Sbjct: 603 DSATLSQLPFYAGFIAYAEQQNA 625
>gi|410099466|ref|ZP_11294437.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
gi|409218937|gb|EKN11903.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
Length = 647
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 260/519 (50%), Gaps = 53/519 (10%)
Query: 324 DINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRF 383
++N V + TS+ M A+ + + ++ LLG + RN P RF
Sbjct: 130 NVNSELGVQLYFDETSYKTMFNALSGVMKAKNNQLAHLRDVLLGKTPTSR--RNLFPVRF 187
Query: 384 GAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 442
P LN +Q AV VL + +S++ GPPGTGKT T +Y + + QV+VCA
Sbjct: 188 -----PWLNTTQEEAVNHVLSAKEVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCAQ 241
Query: 443 SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSE----KSE 495
SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R H D SE +
Sbjct: 242 SNTAVDWISEKLVDRGINVLRIGNPTR--VNDKM--LSFTYERRFESHPDYSELWGIRKA 297
Query: 496 LHKLQQ--LKDEQGELSSSDEKKYKALKRATEREISQSAD------VICCTCVGAGDPRL 547
+ ++Q K E ++ + + RATE E+ AD VI CT VG+ + L
Sbjct: 298 IREIQSSFRKKSHSEKDTARNRLSRLRFRATELEVQIDADLFSEARVIACTLVGSANRVL 357
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
N F + IDE+ QA E C I + A +V+L GDH QL P I C +A R GL ++L
Sbjct: 358 TNHNFTTLFIDEAAQALEAACWIA-ISKADRVILAGDHHQLPPTIKCIEATRGGLDRTLM 416
Query: 608 ERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--WPVP 664
+++ + + L +VQYRMH + F S FY+ LQ + R D P W
Sbjct: 417 QKVAAGKPETVSLLKVQYRMHEDIMRFSSRWFYQDELQAAPEVKYRGILAYDTPVVWFDT 476
Query: 665 NRPMFFYVQMGQEEISASGTSYLNRTEA--------ANVEKIVTTFLRSGVVPSQI--GV 714
F +E+ + S +N+ EA A +EKI + V+ I G+
Sbjct: 477 ADCDF------EEDQLSESQSRINKKEAELLVEQLQAYIEKIS----KERVLDESIDFGL 526
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
I+PY+ Q YI + RN + K I V +VD FQG+E+D I++S VR+N+ IGF
Sbjct: 527 ISPYKSQVQYIRGLIKRNSFFKP-FRKLITVHTVDGFQGQERDVIMISLVRANDQGNIGF 585
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
LND RR+NVA+TRAR ++ILG+ L+K + L +
Sbjct: 586 LNDLRRMNVAITRARMKLIILGDASTLTKHTFYRELYKY 624
>gi|423285449|ref|ZP_17264331.1| hypothetical protein HMPREF1204_03869 [Bacteroides fragilis HMW
615]
gi|404578964|gb|EKA83682.1| hypothetical protein HMPREF1204_03869 [Bacteroides fragilis HMW
615]
Length = 634
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 245/470 (52%), Gaps = 53/470 (11%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R T P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RETYPVRF-----PWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFEGHPSYT 291
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E ++ + +RATE EI + D VI T
Sbjct: 292 ELWGIRKSIREMGNRMRKSSYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILTGRRFTTLFIDEAAQALEAACWIA-IRKADRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL Q+L E++ + + L +VQYRMH S+ +F S FY+G LQ + R +D
Sbjct: 411 NGLEQTLMEKVAANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLD 470
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS----GVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R V+ +I
Sbjct: 471 LPMSW-IDTSEMEFH-----EEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERI 524
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLY-----KEIEVASVDSFQGREKDYIILSCVR 765
G+I+PY+ Q Y+ G L+ L+ +I + +VD FQG+E+D I +S VR
Sbjct: 525 DFGLISPYKAQVQYL------RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVR 578
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+NE IGFLND RR+NVA+TRAR +VILG+ +SK + L+ + +
Sbjct: 579 ANEDGQIGFLNDLRRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|224536127|ref|ZP_03676666.1| hypothetical protein BACCELL_00992 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522261|gb|EEF91366.1| hypothetical protein BACCELL_00992 [Bacteroides cellulosilyticus
DSM 14838]
Length = 627
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 244/465 (52%), Gaps = 48/465 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 179 RELYPVRF-----PWLNSTQENAVNKVLNSRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 232
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R S
Sbjct: 233 PQVLVCAQSNTAVDWICEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFEGHPAYS 288
Query: 495 ELHKLQQLKDEQG--------ELSSSDEKKYKALKRATEREISQSAD------VICCTCV 540
EL +++ E G E S+ + + RAT+ EI +AD VI T V
Sbjct: 289 ELWSIRKAMREIGGKHRGSYEERESARNRMSRLRDRATQLEIQINADLFDNAHVIASTLV 348
Query: 541 GAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
+ L F + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 349 SSNHRILNGRHFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAARG 407
Query: 601 GLAQSLFERLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
GL +L ER+V KP L+VQYRMH + +FPS FY G LQ I R
Sbjct: 408 GLECTLMERVV--ANKPSTVSLLKVQYRMHEDIMKFPSQWFYNGELQAAPEIRYRGILDW 465
Query: 658 DFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL-RSG---VVPSQ 711
D P W + M F +EE +N+ EA + + + ++ R G V+ +
Sbjct: 466 DTPINW-IDTSDMDF-----KEEFIGETFGRINKAEADLLLQELKVYIDRIGGKRVLEER 519
Query: 712 I--GVITPYEGQRAYIVNYMSRNGALRQQLYKEI-EVASVDSFQGREKDYIILSCVRSNE 768
I G+I+PY+ Q Y+ N + +G+L+ Y+ + V +VD FQG+E+D I +S VR+NE
Sbjct: 520 IDFGIISPYKAQVQYLRNKIKASGSLKP--YRSLLTVNTVDGFQGQERDVIFISLVRANE 577
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
IGFLND RR+NVA+TRAR +VILG + + + + L+ +
Sbjct: 578 DGQIGFLNDLRRMNVAITRARMKLVILGEAETMKRHKFYKELIEY 622
>gi|154419455|ref|XP_001582744.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121916981|gb|EAY21758.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 481
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 230/447 (51%), Gaps = 18/447 (4%)
Query: 394 SQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEK 453
S +F L + + IQGPPGTGKT T AI G VL+ SN+ D ++
Sbjct: 2 SDLFFSYIRLSQKFTFIQGPPGTGKTRTIVAITKSFIDAGIKPVLIVGHSNLTADFCCQE 61
Query: 454 ISATGLKVVRLCAKSREAVSSPVEHLTLHYQ--VRHLDTSEKSELHKLQQLKDEQGELSS 511
+ + V V++ + Y + + S+ S K + + + +
Sbjct: 62 LRHINVGRVLSLQIEDAIVAAKANEIDSEYDHPIPGFNRSDYSIHRKAVDAYNNKNGIEA 121
Query: 512 SDE------KKYKALKRATEREISQSADVICCTCVGAGDPRL-----ANFRFRQVLIDES 560
K Y+ LK E+++ D IC T +G RL RF V+ DE+
Sbjct: 122 GTYPNMRRMKVYRELK-DIEQKLIMDKDAICVTSSTSGAARLDTLKNTKLRFPVVIFDEA 180
Query: 561 TQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRL 620
Q +P+ LI L ++++LVGD QLGP+I+ + A + GL ++ +L+ + P L
Sbjct: 181 GQCIDPDFLISLCHFPERMILVGDTFQLGPLILNRSAEQCGLGVNILTKLLKQEIAPNLL 240
Query: 621 QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS---GIDFPWPVPNRPMFFYVQMGQE 677
QYRMHP+L EFPS FY +++G+ + R + G F +P P +P+ F+ G+E
Sbjct: 241 VHQYRMHPALLEFPSKYFYHDLVKSGIKADARIFAYPKGKMFKFPNPEKPLMFWDVDGKE 300
Query: 678 EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL-R 736
+ + G S++N +A V K + +G+ P IG+IT Y GQ ++++ + ++
Sbjct: 301 SVGSDGNSFVNLVQADAVSKALDALHEAGIPPESIGIITAYNGQNDFLMDNLGEICSVCG 360
Query: 737 QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILG 796
++ +E+A+VD FQGREKD+II + VRSN IGFL RLNV++TRARYG++++G
Sbjct: 361 EKFINRVEIATVDGFQGREKDFIIFNLVRSNPDFNIGFLVRKERLNVSITRARYGLIVIG 420
Query: 797 NPKVLSKQPLWNGLLTHYKEHECLVEG 823
+ + S ++ + ++ ++ C + G
Sbjct: 421 SARTFSGCQMYCDWMKYFVDNNCFIRG 447
>gi|357155053|ref|XP_003576992.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium
distachyon]
Length = 980
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 268/548 (48%), Gaps = 83/548 (15%)
Query: 333 FVWKSTSFDRMQGA---------------MKTFAVDETSVSGYIYHHLLGHEVEVQMVRN 377
F KS DR+Q ++ + +T+ S L G + +++M+ N
Sbjct: 421 FSGKSVRIDRIQALADGLTYERNCEALMLLQRKGLQKTNASIGAVATLFGDKEDMKMLEN 480
Query: 378 TLPRRFGAPGLP----------ELNASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAI 425
+G +P + +ASQ A+ L +RPI +IQGPPGTGKT + +
Sbjct: 481 NNMADWGESAMPVDGLLEKYNYDFDASQSHAIALGLNKKRPIVVIQGPPGTGKTGLLSNL 540
Query: 426 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR-----------EAVSS 474
+ A Q + +VLV APSN AVD + EK+S TGL +VR+ SR E V
Sbjct: 541 I-RCAVQQRERVLVTAPSNAAVDNMVEKLSGTGLNIVRVGNPSRISPSVSSKSLGEIVKR 599
Query: 475 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR-------ATERE 527
+E T +Q++ KS L K + L++ ++ K L + T +E
Sbjct: 600 SLEKFTQEFQMK------KSNLRKDLNHCIQDDSLAAGIRQRLKKLGKNFRKKENETIKE 653
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQ-VLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
I +A+V+ T +GA DP + F V+IDE+ QA EP C IP++ G K+ +L GD
Sbjct: 654 ILSNAEVVLSTNIGAADPLIKGIGFFDLVIIDEAGQAIEPSCWIPILQG-KRCILAGDQH 712
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
QL PVI+ ++A GL SL +R L GL +L +QYRMH S++ + SN Y G L+
Sbjct: 713 QLAPVILSREAMEGGLGISLLQRASSLHDGLLTTQLTMQYRMHESIASWASNEMYSGLLK 772
Query: 645 NGVTINERQSSGIDFP-----WPVPNRPMFFYVQM--------GQEEISASGT-SYLNRT 690
+ ++ R +D+P W + +M +E + +GT S+ N
Sbjct: 773 SSPSVASRLL--VDYPFIQETWITRCALLLLDTRMPYGSLNIDCEEHLDFAGTGSFYNNG 830
Query: 691 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE---IEVAS 747
EA V + V + GV P+ I V +PY Q + + + Y E +EV++
Sbjct: 831 EADIVVQHVLNLVLCGVSPTAIAVQSPYIAQVQLLRDTLEE--------YPEAYGVEVST 882
Query: 748 VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 807
+DSFQGRE D +++S VRSN +GFL D RR+NVA+TRAR +V++ + +
Sbjct: 883 IDSFQGREADAVVISMVRSNSLGAVGFLGDSRRMNVAITRARRHVVLVCDSSTICNNAFL 942
Query: 808 NGLLTHYK 815
LL H +
Sbjct: 943 ARLLRHIR 950
>gi|255533226|ref|YP_003093598.1| DEAD/DEAH box helicase [Pedobacter heparinus DSM 2366]
gi|255346210|gb|ACU05536.1| DEAD-like helicase [Pedobacter heparinus DSM 2366]
Length = 636
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 267/520 (51%), Gaps = 51/520 (9%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 385
N +D ++ S+D MQ A+K +V HHL+ ++ + + +
Sbjct: 119 NGKLGIDVLFDDHSYDEMQAAVKRASVQNEQADN---HHLI--KILTGIDKPSFAEDVVH 173
Query: 386 PGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
+ +LN Q AV ++ + ++++ GPPGTGKT T V M KQ Q+LV APSN
Sbjct: 174 YPVAKLNKVQQLAVYHIVAAQQLAIVHGPPGTGKTTTLVQAVKTMIKQHGRQILVVAPSN 233
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSEL------- 496
AVD L+EK++ GL V+R+ R VS + LTL ++ H E +L
Sbjct: 234 TAVDLLSEKLADEGLNVLRIGNPVR--VSEKLFSLTLDSKMSAHASIKEVKDLKKQAAEY 291
Query: 497 ----HKLQQ-----LKDEQGELSSSDEKKYKALKRATEREISQ---SADVICCTCVGAGD 544
HK ++ K+++ L K KA+ A + I A V+ T VGA
Sbjct: 292 KKMAHKYKRNFGRAEKEQRKALFDEAHKLMKAVAGAEQYIIEDLIGKAQVVTATLVGANH 351
Query: 545 PRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
+ + +F V+IDE+ QA EP C IP +L A++V+L GDHCQL P I AA+AGL+
Sbjct: 352 YTIKDRKFDTVVIDEAGQALEPACWIP-ILKAQKVILAGDHCQLPPTIKSNDAAKAGLST 410
Query: 605 SLFERLVLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
+L E+ + L P + L+ QYRMH + + S FYEG L+ + + + FP
Sbjct: 411 TLLEKCI--ALHPNAVVLLEEQYRMHTQIMAYSSKVFYEGKLKAHAAV----AGHLLFP- 463
Query: 662 PVPNRPMFFYVQMG-QEEISASGTSYLNRTEAANVEKIVTTF-LRSGVV------PSQIG 713
+ + F G E GTS N EA + K +T L+ V PS IG
Sbjct: 464 --GDTALNFIDTAGCGFEEQREGTSIYNSEEAVFLLKHLTQLVLKLAEVYVAENFPS-IG 520
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
VI+PY+ Q+ YI+ + N + Q ++I V ++DSFQG+E+D + + RSN IG
Sbjct: 521 VISPYK-QQIYILKDLLLNHPVLQLYIEKISVNTIDSFQGQERDIVYIGMTRSNNEGVIG 579
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
FL+D RR+NVA+TRAR +V++G+ LS+ P ++ + +
Sbjct: 580 FLSDIRRMNVAMTRARKKLVVIGDSATLSRLPFYSDFIAY 619
>gi|423251575|ref|ZP_17232588.1| hypothetical protein HMPREF1066_03598 [Bacteroides fragilis
CL03T00C08]
gi|423254898|ref|ZP_17235828.1| hypothetical protein HMPREF1067_02472 [Bacteroides fragilis
CL03T12C07]
gi|392649760|gb|EIY43433.1| hypothetical protein HMPREF1066_03598 [Bacteroides fragilis
CL03T00C08]
gi|392653464|gb|EIY47120.1| hypothetical protein HMPREF1067_02472 [Bacteroides fragilis
CL03T12C07]
Length = 634
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 245/470 (52%), Gaps = 53/470 (11%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R T P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RETYPVRF-----PWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFEGHPAYT 291
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E ++ + +RATE EI + D VI T
Sbjct: 292 ELWGIRKSIREMGNRMRKSSYSEREAAHSRINHLRERATELEIQINEDLFSGARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILTGRRFTTLFIDEAAQALEAACWIA-IRKADRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL Q+L E++ + + L +VQYRMH S+ +F S FY+G LQ + R +D
Sbjct: 411 NGLEQTLMEKVAANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLD 470
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS----GVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R V+ +I
Sbjct: 471 LPMSW-IDTSEMEFH-----EEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERI 524
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLY-----KEIEVASVDSFQGREKDYIILSCVR 765
G+I+PY+ Q Y+ G L+ L+ +I + +VD FQG+E+D I +S VR
Sbjct: 525 DFGLISPYKAQVQYL------RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVR 578
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+NE IGFLND RR+NVA+TRAR +VILG+ +SK + L+ + +
Sbjct: 579 ANEDGQIGFLNDLRRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|423270406|ref|ZP_17249377.1| hypothetical protein HMPREF1079_02459 [Bacteroides fragilis
CL05T00C42]
gi|423275362|ref|ZP_17254307.1| hypothetical protein HMPREF1080_02960 [Bacteroides fragilis
CL05T12C13]
gi|392698330|gb|EIY91512.1| hypothetical protein HMPREF1079_02459 [Bacteroides fragilis
CL05T00C42]
gi|392702843|gb|EIY95988.1| hypothetical protein HMPREF1080_02960 [Bacteroides fragilis
CL05T12C13]
Length = 634
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 245/470 (52%), Gaps = 53/470 (11%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R T P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RETYPVRF-----PWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFEGHPAYT 291
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E ++ + +RATE EI + D VI T
Sbjct: 292 ELWGIRKSIREMGNRMRKSSYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILTGRRFTTLFIDEAAQALEAACWIA-IRKADRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL Q+L E++ + + L +VQYRMH S+ +F S FY+G LQ + R +D
Sbjct: 411 NGLEQTLMEKVAANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLD 470
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS----GVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R V+ +I
Sbjct: 471 LPMSW-IDTSEMEFH-----EEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERI 524
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLY-----KEIEVASVDSFQGREKDYIILSCVR 765
G+I+PY+ Q Y+ G L+ L+ +I + +VD FQG+E+D I +S VR
Sbjct: 525 DFGLISPYKAQVQYL------RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVR 578
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+NE IGFLND RR+NVA+TRAR +VILG+ +SK + L+ + +
Sbjct: 579 ANEDGQIGFLNDLRRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|336410631|ref|ZP_08591107.1| hypothetical protein HMPREF1018_03124 [Bacteroides sp. 2_1_56FAA]
gi|335944206|gb|EGN06030.1| hypothetical protein HMPREF1018_03124 [Bacteroides sp. 2_1_56FAA]
Length = 634
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 245/470 (52%), Gaps = 53/470 (11%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R T P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RETYPVRF-----PWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFEGHPAYT 291
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E ++ + +RATE EI + D VI T
Sbjct: 292 ELWGIRKSIREMGNRMRKSSYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILTGRRFTTLFIDEAAQALEAACWIA-IRKADRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL Q+L E++ + + L +VQYRMH S+ +F S FY+G LQ + R +D
Sbjct: 411 NGLEQTLMEKVAANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLD 470
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS----GVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R V+ +I
Sbjct: 471 LPMSW-IDTSEMEFH-----EEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERI 524
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLY-----KEIEVASVDSFQGREKDYIILSCVR 765
G+I+PY+ Q Y+ G L+ L+ +I + +VD FQG+E+D I +S VR
Sbjct: 525 DFGLISPYKAQVQYL------RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVR 578
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+NE IGFLND RR+NVA+TRAR +VILG+ +SK + L+ + +
Sbjct: 579 ANEDGQIGFLNDLRRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|423226361|ref|ZP_17212827.1| hypothetical protein HMPREF1062_05013 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629789|gb|EIY23795.1| hypothetical protein HMPREF1062_05013 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 627
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 244/465 (52%), Gaps = 48/465 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 179 RELYPVRF-----PWLNSTQENAVNKVLNSRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 232
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R S
Sbjct: 233 PQVLVCAQSNTAVDWICEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFEGHPAYS 288
Query: 495 ELHKLQQLKDEQG--------ELSSSDEKKYKALKRATEREISQSAD------VICCTCV 540
EL +++ E G E S+ + + RAT+ EI +AD VI T V
Sbjct: 289 ELWSIRKAMREMGGKHRGSYEERESARNRMSRLRDRATQLEIQINADLFDNAHVIASTLV 348
Query: 541 GAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
+ L F + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 349 SSNHRILNGRHFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAARG 407
Query: 601 GLAQSLFERLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
GL +L ER+V KP L+VQYRMH + +FPS FY G LQ I R
Sbjct: 408 GLECTLMERVV--ANKPSTVSLLKVQYRMHEDIMKFPSQWFYNGELQAAPEIRYRGILDW 465
Query: 658 DFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL-RSG---VVPSQ 711
D P W + M F +EE +N+ EA + + + ++ R G ++ +
Sbjct: 466 DTPINW-IDTSDMDF-----KEEFIGETFGRINKAEADLLLQELKAYIDRIGGKRMLEER 519
Query: 712 I--GVITPYEGQRAYIVNYMSRNGALRQQLYKEI-EVASVDSFQGREKDYIILSCVRSNE 768
I G+I+PY+ Q Y+ N + +G+L+ Y+ + V +VD FQG+E+D I +S VR+NE
Sbjct: 520 IDFGIISPYKAQVQYLRNKIKASGSLKP--YRSLLTVNTVDGFQGQERDVIFISLVRANE 577
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
IGFLND RR+NVA+TRAR +VILG + + + + L+ +
Sbjct: 578 DGQIGFLNDLRRMNVAITRARMKLVILGEAETMKRHKFYKELIEY 622
>gi|294930582|ref|XP_002779607.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239889004|gb|EER11402.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 151
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/148 (68%), Positives = 123/148 (83%)
Query: 524 TEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVG 583
ERE+ ++ADVIC TC GAGDPRL RF+ VL+DE+TQA EPE LIP+ GAKQV+LVG
Sbjct: 1 VERELLENADVICTTCAGAGDPRLGKLRFKMVLVDEATQACEPEALIPICNGAKQVILVG 60
Query: 584 DHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTL 643
DH QLGPV+MCKKAA+AG QSLFERL+ LG++PIRL+VQYRMHPSL+EFPS +FY+G L
Sbjct: 61 DHKQLGPVVMCKKAAKAGFKQSLFERLIALGVRPIRLEVQYRMHPSLAEFPSQTFYDGCL 120
Query: 644 QNGVTINERQSSGIDFPWPVPNRPMFFY 671
QNG+T+ +RQ SG+ FPWP PMFFY
Sbjct: 121 QNGITMEDRQVSGVKFPWPREEMPMFFY 148
>gi|384248299|gb|EIE21783.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Coccomyxa subellipsoidea C-169]
Length = 426
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 227/441 (51%), Gaps = 38/441 (8%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQG--------QGQVLVCAP 442
LN SQ A+ + + +L QGPPGTGKT T A++ +A+ G +L CA
Sbjct: 1 LNRSQQRAIATAMSSTFTLWQGPPGTGKTRTLLALLEILARISGTPQRAAMMGPILACAD 60
Query: 443 SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQL 502
+N A D + E + A G+ V R+ + A P L + H + + + ++Q
Sbjct: 61 TNAATDNIVEGLLARGINVTRM---GQPAKVRPFLCLLSLVLLLH-AVAARRQPARVQSF 116
Query: 503 KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDP-RLANFRFRQVLIDEST 561
L SS K L +A + + + V+C TC GAGD RL R++ V++DE+T
Sbjct: 117 CG----LLSSKFIKANELVQAAGESVLRDSQVVCATCAGAGDDQRLFTARYKMVIVDEAT 172
Query: 562 QATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQ 621
QATEP +IPLV GA+ VV+ GD QL P + + A A L ++LF+RL GL P+ L
Sbjct: 173 QATEPSNIIPLVRGAECVVMAGDPKQLPPTLQSQGALDAQLDRTLFDRLQESGLGPVLLD 232
Query: 622 VQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP-MFFYVQMGQEEIS 680
+QYRMHP ++EFPS FY+G L+ G++ ER WP P P M + G EE S
Sbjct: 233 MQYRMHPLIAEFPSARFYQGKLKTGISAEERPLPQ-GLAWPNPGCPVMMVECETGLEERS 291
Query: 681 ASGTSYLNRTEA---ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMS--RNGAL 735
+G+ + + ++ E S Q ++ V Y S + A
Sbjct: 292 MTGSIGVTKAKSPAKPGAESAAAANTGSSYFNKQEAILA---------VRYASPPKPVAK 342
Query: 736 RQQLYK-----EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARY 790
+ Y ++ V+SVD +QGRE D I+ S VR NE +GF+ DPRRLNVA+TR R
Sbjct: 343 PLEFYSVIMGVQVTVSSVDGYQGREADVIVFSAVRCNEMGSLGFVADPRRLNVAITRPRR 402
Query: 791 GIVILGNPKVLSKQPLWNGLL 811
G+V++G+P LS W G +
Sbjct: 403 GLVVVGSPNTLSSDGGWRGWV 423
>gi|375359786|ref|YP_005112558.1| putative DNA-binding protein [Bacteroides fragilis 638R]
gi|301164467|emb|CBW24025.1| putative DNA-binding protein [Bacteroides fragilis 638R]
Length = 634
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 245/470 (52%), Gaps = 53/470 (11%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R T P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RETYPVRF-----PWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFEGHPAYT 291
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E ++ + +RATE EI + D VI T
Sbjct: 292 ELWGIRKSIREMGNRMRKSSYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILTGRRFTTLFIDEAAQALEAACWIA-IRKADRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL Q+L E++ + + L +VQYRMH S+ +F S FY+G LQ + R +D
Sbjct: 411 NGLEQTLMEKVAANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLD 470
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS----GVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R V+ +I
Sbjct: 471 LPMSW-IDTSEMEFH-----EEFIGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERI 524
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLY-----KEIEVASVDSFQGREKDYIILSCVR 765
G+I+PY+ Q Y+ G L+ L+ +I + +VD FQG+E+D I +S VR
Sbjct: 525 DFGLISPYKAQVQYL------RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVR 578
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+NE IGFLND RR+NVA+TRAR +VILG+ +SK + L+ + +
Sbjct: 579 ANEDGQIGFLNDLRRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|409074520|gb|EKM74916.1| hypothetical protein AGABI1DRAFT_123471 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 937
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 249/487 (51%), Gaps = 72/487 (14%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ--VLVCA 441
G P LN SQ+ A+ +++ + ISL+QGPPGTGKT T + + + +LVC
Sbjct: 382 GDPDFKHLNKSQIKAMATMIGKRISLVQGPPGTGKTKTIVETIKLLKLHFEVSHPILVCT 441
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVS---SPVEHLTLHYQVRHLDTSEKSELHK 498
+NVAVD L E + GLK +R+ SR S ++HL L + ++ L + L K
Sbjct: 442 YTNVAVDNLLEGFAKAGLKPLRVGFGSRIRASLQEYSLDHLLLKHPLQPLLLETIALLDK 501
Query: 499 LQQ------------LKDEQGELSSS-----------------------DEKKYKALKRA 523
+++ LK +G+ S+ KKY L++
Sbjct: 502 MEEEISQLGALIRDTLKKIEGKTPSAAMEQRVRNMSQAMGMKDRRRNELRAKKY-GLQQE 560
Query: 524 TEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVG 583
+I +SADV+C TC+ + L F V +DE++ +TEP LIP++ G++ + L+G
Sbjct: 561 MLHDIVKSADVVCSTCITSASSALNVADFPVVFVDEASMSTEPATLIPIMKGSRHLALIG 620
Query: 584 DHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGT 642
DH QL PVI+ ++A GLA SLFERL G+ P + L +QYRMHP +S FPS FY +
Sbjct: 621 DHKQLPPVIVSQEARAQGLAVSLFERLTEEGIVPSVMLDIQYRMHPRISHFPSLEFYNSS 680
Query: 643 LQNGVTINE-RQSSGIDFPWPVP-------------NRP-MFFYVQMGQEEISASGTSYL 687
+Q+G T + G++ P + +RP + F G E + SG S +
Sbjct: 681 IQDGTTDKDGNVVVGLEPPMSLTHLLQDGNHEGQSRSRPSVIFLDHFGYE--TMSGRSRV 738
Query: 688 NRTEAANVEKIVTTFLRSG--VVPSQIGVITPYEGQRAYIVNYMS---RNG-----ALRQ 737
N EA V +V L + IG+I PY Q + ++ RNG L
Sbjct: 739 NHHEAQIVVSLVEDLLLQNPQLRGQDIGIIAPYVAQINLLNRLLTTDVRNGERFREVLGN 798
Query: 738 QLYK---EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 794
Q Y+ ++EV +VD F+GREK+ I+ S VR+N+ IGFL D RRLNV LTRA+ G+ +
Sbjct: 799 QRYRDMSDVEVKTVDGFEGREKEVIVFSTVRNNDSGRIGFLADRRRLNVGLTRAKRGLFV 858
Query: 795 LGNPKVL 801
+G + +
Sbjct: 859 VGGMRTI 865
>gi|156094736|ref|XP_001613404.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802278|gb|EDL43677.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 2314
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 219/422 (51%), Gaps = 28/422 (6%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQ 449
LN SQ A S L R ++L+QGPPGTGKT + AI+ +Q + +L A SNVA +
Sbjct: 1807 LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHRQNSNKKILAVADSNVAANN 1866
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGEL 509
L E + ++ VR+ A S ++ +D +L KL++
Sbjct: 1867 LVEGLKKRNIQAVRVGAGSDSDF----------HEEAIMDFHRYKDLLKLRK-------- 1908
Query: 510 SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECL 569
++ +K+ K +K E + +V+ TCVG+G N +F +V+IDE Q+ EP L
Sbjct: 1909 -NNLQKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPSNL 1967
Query: 570 IPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQYRMHP 628
IPL +VL+GDH QL P I+ A + GL +SL ER V+ + P+ L Q RMH
Sbjct: 1968 IPLGHNCNNLVLIGDHKQLPPTIISSDATKLGLDRSLLERFVMAKIAPVHLLTTQRRMHL 2027
Query: 629 SLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN-RPMFFYVQMGQ---EEISASGT 684
S+ FP+ FY+ L+ E + F WP P R F V +G+ + +A GT
Sbjct: 2028 SICTFPNIHFYDNKLKTENVTEENRPIIKGFLWPNPKCRLAFIDVSLGKPGSKFENAYGT 2087
Query: 685 SYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S N E + ++ + + G V +IG++T Y+ Q+ + + A + I
Sbjct: 2088 SKFNLYEIEPLISVLKSIVNEGCVSVDEIGILTAYDAQKVKLKKAVQ--DAFPYEAACRI 2145
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
E+ S+D FQG+EKD I+ S VRSN + +GFL D RRLNV LTRA+ G+++ G+ L+
Sbjct: 2146 EIDSIDGFQGKEKDLILFSAVRSNANNELGFLKDARRLNVMLTRAKRGVILFGDQFTLAN 2205
Query: 804 QP 805
P
Sbjct: 2206 DP 2207
>gi|380696742|ref|ZP_09861601.1| helicase [Bacteroides faecis MAJ27]
Length = 652
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 240/466 (51%), Gaps = 43/466 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 200 RELYPVRF-----PWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHR-E 253
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK++ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 254 PQVLVCAQSNTAVDWICEKLADRGVAVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 309
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 310 ELWGIRKSIREMGSRMRRGSYSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTL 369
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 370 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEAAR 428
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ FPS FY G L+ + R D
Sbjct: 429 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMRFPSEWFYNGELEAAPEVRNRGILDFD 488
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI 712
P W + M F+ EE +N+ EA +E + ++ ++ +I
Sbjct: 489 TPMNW-IDTSEMDFH-----EEFVGESFGRINKQEANLLLQELEAYINRIGKTRILDERI 542
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + N LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 543 DFGLISPYKAQVQYLRSKIRGNSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 601
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
IGFLND RR+NVA+TRAR +VILG+ L++ P + L+ + ++
Sbjct: 602 QIGFLNDLRRMNVAITRARMKLVILGDATTLAQHPFYRKLMQYIRQ 647
>gi|60683002|ref|YP_213146.1| DNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|60494436|emb|CAH09232.1| putative DNA-binding protein [Bacteroides fragilis NCTC 9343]
Length = 634
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 245/470 (52%), Gaps = 53/470 (11%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R T P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RATYPVRF-----PWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFEGHPAYT 291
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E ++ + +RATE EI + D VI T
Sbjct: 292 ELWGIRKSIREMGNRMRKSSYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILTGRRFTTLFIDEAAQALEAACWIA-IRKADRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL Q+L E++ + + L +VQYRMH S+ +F S FY+G LQ + R +D
Sbjct: 411 NGLEQTLMEKVAANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLD 470
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS----GVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R V+ +I
Sbjct: 471 LPMSW-IDTSEMEFH-----EEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERI 524
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLY-----KEIEVASVDSFQGREKDYIILSCVR 765
G+I+PY+ Q Y+ G L+ L+ +I + +VD FQG+E+D I +S VR
Sbjct: 525 DFGLISPYKAQVQYL------RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVR 578
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+NE IGFLND RR+NVA+TRAR +VILG+ +SK + L+ + +
Sbjct: 579 ANEDGQIGFLNDLRRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|388583155|gb|EIM23458.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 745
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 172/575 (29%), Positives = 264/575 (45%), Gaps = 91/575 (15%)
Query: 313 LELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEV 372
L+L + VP++ F +D+ S+ R A++ +D + + L G +
Sbjct: 192 LQLLFERKVPINTEDRFRIDYTLNDVSYRRSLDALECLHLDPVEQASSSDNALKGTHLRD 251
Query: 373 QMVR---------------NTLPRRFGAPG--------LPELNASQVFAVKSVLQRPISL 409
++ + R+ P + LN QV AV ++ SL
Sbjct: 252 LLIEGSTNYDGIFANDCWIRSWASRYSKPNPIRVEGDPILNLNPRQVQAVALMIGNRASL 311
Query: 410 IQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAK 467
IQGPPGTGKT T + + M K + +L+ A +NVA D +A +S T LK+ RL
Sbjct: 312 IQGPPGTGKTATISNSINLMKKYFKIPHPILIAAHTNVATDNIASILSKTDLKITRLGHI 371
Query: 468 SR-------EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ----LKDEQGELSSSDEKK 516
SR + + + VE + +V+H + K L+++ E + ++
Sbjct: 372 SRIAPELHKDTLVAQVEAHPQYREVKHARIKSEGLFKKAYSMTGLLREQLNEEARKQRRE 431
Query: 517 YKALKRATEREISQSADVICCTCVGAGDPR-LANFRFRQVLIDESTQATEPECLIPLVLG 575
+ + + +I +SADV+C TC+G G+PR L F V IDE +QATEP LIPL+ G
Sbjct: 432 ATRITKEIQDKIIKSADVVCATCLG-GNPRDLTGIDFPIVFIDEGSQATEPTTLIPLMKG 490
Query: 576 AKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPS 635
+ ++GDH QL P+I ++A+R VQYRMHP LSE P+
Sbjct: 491 CSHMSIIGDHKQLAPIITSEEASRQ--------------------DVQYRMHPDLSEIPN 530
Query: 636 NSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFF-------YVQMGQEEISASGTSYLN 688
N FY L +G R S+G P F +V E + G S +N
Sbjct: 531 NIFYNSQLIDGC----RSSNGTLLSGYTPPHSSFTRKDSALAFVNHDHSE-TKDGESTMN 585
Query: 689 RTEAANVEKIVTTFLRSG--VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL------- 739
EA + I+ + + IG+++PY Q ++ ++R+ R++
Sbjct: 586 EGEAQVIMTIIADLFEKNEDLKGTDIGIVSPYIAQTIELLRLINRDYYWRRRFADILGPQ 645
Query: 740 ----YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
++IEV +VD F+GREK IILS RSNE IGFL+DPRR NV LTRA+ ++++
Sbjct: 646 RVHELRQIEVKTVDGFEGREKQVIILSLTRSNEMGSIGFLDDPRRANVGLTRAKRCLMVV 705
Query: 796 GNPKVLSK--------QPLWNGLLTHYKEHECLVE 822
GN + L K LW L++ K VE
Sbjct: 706 GNARTLEKGVVNMSKETQLWKELISLCKSKSAYVE 740
>gi|153808854|ref|ZP_01961522.1| hypothetical protein BACCAC_03154 [Bacteroides caccae ATCC 43185]
gi|149128680|gb|EDM19898.1| putative DNA helicase [Bacteroides caccae ATCC 43185]
Length = 647
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 241/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 196 RELYPVRF-----PWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHR-E 249
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 250 PQVLVCAQSNTAVDWISEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFESHPAYP 305
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREIS------QSADVICCTC 539
EL +++ E G E + + RATE EI SA VI T
Sbjct: 306 ELWGIRKSIRETGSRMRKGSYSEREGMRSRMSRLRDRATELEIQINTDLFDSARVIASTL 365
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 366 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEAAR 424
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+GL +L E++V + L ++QYRMH S+ FPS FY G L+ + R D
Sbjct: 425 SGLDHTLMEKVVHKKPSAVSLLKMQYRMHESIMRFPSEWFYHGELEAAPEVRYRSILDFD 484
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI 712
P W + M F+ EE +N+ EA +E + ++ ++ +I
Sbjct: 485 TPMNW-IDTSEMDFH-----EEFVGESFGRINKQEANLLLQELEAYINRIGKARILDEKI 538
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 539 DFGLISPYKAQVQYLRSKIKVSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 597
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L++ K+ +
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDAVTLTKHPFYKRLMSFIKKED 645
>gi|423220918|ref|ZP_17207412.1| hypothetical protein HMPREF1061_04185 [Bacteroides caccae
CL03T12C61]
gi|392622396|gb|EIY16524.1| hypothetical protein HMPREF1061_04185 [Bacteroides caccae
CL03T12C61]
Length = 647
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 241/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 196 RELYPVRF-----PWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHR-E 249
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 250 PQVLVCAQSNTAVDWISEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFESHPAYP 305
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREIS------QSADVICCTC 539
EL +++ E G E + + RATE EI SA VI T
Sbjct: 306 ELWGIRKSIRETGSRMRKGSYSEREGMRSRMSRLRDRATELEIQINTDLFDSARVIASTL 365
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 366 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEAAR 424
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+GL +L E++V + L ++QYRMH S+ FPS FY G L+ + R D
Sbjct: 425 SGLDHTLMEKVVHKKPSAVSLLKMQYRMHESIMRFPSEWFYHGELEAAPEVRYRSILDFD 484
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI 712
P W + M F+ EE +N+ EA +E + ++ ++ +I
Sbjct: 485 TPMNW-IDTSEMDFH-----EEFVGESFGRINKQEANLLLQELEAYINRIGKARILDEKI 538
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 539 DFGLISPYKAQVQYLRSKIKVSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 597
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L++ K+ +
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDAVTLTKHPFYKRLMSFIKKED 645
>gi|149276566|ref|ZP_01882710.1| DNA helicase [Pedobacter sp. BAL39]
gi|149233086|gb|EDM38461.1| DNA helicase [Pedobacter sp. BAL39]
Length = 634
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 265/526 (50%), Gaps = 69/526 (13%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTF-AVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPG 387
VD ++ S+D MQ A+K ++D + + L G N P A
Sbjct: 121 LGVDVLFDQNSYDEMQHALKQADSIDGQGGTADLVKTLTG---------NRTPEFSIAHY 171
Query: 388 ---LPELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 443
+P LN Q AV +L ++++ GPPGTGKT T V ++KQ Q+LV APS
Sbjct: 172 QYLIPSLNVMQQLAVDKILSADHLAIVHGPPGTGKTTTLVQAVKALSKQDHQQILVAAPS 231
Query: 444 NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLK 503
N AVD L EK++ GL V+R+ SR VS + LTL ++ +E E+ + + LK
Sbjct: 232 NTAVDLLTEKLAEQGLNVLRIGNPSR--VSERLMSLTLDSRM-----AEHPEMKQAKALK 284
Query: 504 DEQGE-----------LSSSDEKKYKAL--------------KRATEREISQSADVICCT 538
+ E +++++ KAL ++ +I ADVI T
Sbjct: 285 KQANEYKNMAHKYKRNFGKAEKEQRKALFDEAHKIMKEVGNIEQYVSDDIISKADVIAAT 344
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
VGA + +++ V+IDE+ QA EP C IP++ +++V+ GDHCQL P I +AA
Sbjct: 345 LVGANHHTIRKLKYKTVIIDEAGQALEPACWIPII-KSEKVIFAGDHCQLSPTIKSNEAA 403
Query: 599 RAGLAQSLFERLVLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
+ GL+ +L E++V P + L+ QYRM+ S+ E+ S FY+G L+ S
Sbjct: 404 KKGLSNTLMEKMV--NQYPESVVLLEEQYRMNRSIMEYSSEVFYQGKLK------AHDSV 455
Query: 656 GIDFPWPVPNRPMFFYVQMGQE-EISASGTSYLNRTEAANVEKIVTTF-----LRSGV-- 707
+ ++P+ F G E G S N EA+ V K + T LR +
Sbjct: 456 ATHLLYD-DDKPLLFIDTAGASFEEKTEGHSISNPDEASFVSKQLETLVQELSLRYSIED 514
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
P+ + +I+PY+ Q +I + + + + +I V ++DSFQG+E+D +++S VRSN
Sbjct: 515 FPT-VAIISPYKQQIVHIKELLQHSPDI-DKFKSKISVNTIDSFQGQERDVVVISMVRSN 572
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
+ IGFL D RR+NVA+TRAR ++++G+ L + P + + +
Sbjct: 573 DEGIIGFLADIRRMNVAMTRARKKLIVIGDSATLCRLPFYENFIAY 618
>gi|124511670|ref|XP_001348968.1| erythrocyte membrane-associated antigen [Plasmodium falciparum 3D7]
gi|23498736|emb|CAD50806.1| erythrocyte membrane-associated antigen [Plasmodium falciparum 3D7]
Length = 2283
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 224/442 (50%), Gaps = 28/442 (6%)
Query: 371 EVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMA 430
+V+ + L P LN SQ A S L R ++L+QGPPGTGKT + AI+
Sbjct: 1757 QVEDIDKYLIESINLPTNLPLNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWH 1816
Query: 431 KQGQGQ-VLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLD 489
KQ + +L A SNVA + L E + ++ VR+ A S D
Sbjct: 1817 KQNSNKKILAVADSNVAANNLVEGLKKRNIQAVRVGAGSDS------------------D 1858
Query: 490 TSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLAN 549
E++ + + + KD ++ +K+ K +K E + +V+ TCVG+G N
Sbjct: 1859 FHEEA-IMEFHRYKDLLKLRKNNMQKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDN 1917
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
+F +V+IDE Q+ EP LIPL +VL+GDH QL P I+ A + GL +SL ER
Sbjct: 1918 EKFERVIIDECAQSIEPSNLIPLGHYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLER 1977
Query: 610 LVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN-RP 667
V+ + P+ L Q RMH S+ FP+ FY+ L+ E + F WP P R
Sbjct: 1978 FVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCRL 2037
Query: 668 MFFYVQMGQ---EEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRA 723
F V +G+ + +A GTS N E + ++ + + G V +IG++T Y+ Q+
Sbjct: 2038 AFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINEGCVSVDEIGILTAYDAQKM 2097
Query: 724 YIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNV 783
+ + A + IE+ S+D FQG+EKD I+ S VRSN + +GFL D RRLNV
Sbjct: 2098 KLKKAVQ--DAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNV 2155
Query: 784 ALTRARYGIVILGNPKVLSKQP 805
LTRA+ G+++ G+ L+ P
Sbjct: 2156 MLTRAKRGVILFGDQFTLANDP 2177
>gi|307102593|gb|EFN50864.1| hypothetical protein CHLNCDRAFT_59413 [Chlorella variabilis]
Length = 762
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 166/457 (36%), Positives = 232/457 (50%), Gaps = 61/457 (13%)
Query: 392 NASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMA---------KQGQGQVLVCAP 442
N SQV AV + L R +L QGPPGTGKT T A V M + QG +L A
Sbjct: 320 NESQVRAVAASLTRTFTLWQGPPGTGKTRTLLAFVEVMVRAVEGSVVRRHAQGAILAVAD 379
Query: 443 SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQL 502
+N A D L + + A G++ VR V P + + ++RH + L L Q
Sbjct: 380 TNAAADNLLDGLLARGIRAVR--------VGQPAK---VRPELRH------ACLEALVQ- 421
Query: 503 KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQ 562
S+ ++ L+ + + Q V+ TC GAGD RL FR V++DE Q
Sbjct: 422 -------STPSGQRAARLRAGADVFLQQ---VVVATCNGAGDARLEAQCFRIVVLDECAQ 471
Query: 563 ATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQ 621
ATEP L+PLV GA+ VV+ GD QL P ++ ++A L LF RL+ G+ L+
Sbjct: 472 ATEPSSLVPLVKGAQCVVMAGDQRQLPPTVVSERAKEMYHLDVPLFTRLLEGGVSSRLLE 531
Query: 622 VQYRMHPSLSEFPSNSFYEGTLQNGVTINER-QSSGIDFPWPVPNRPMFFY-VQMGQEEI 679
VQYRMHP++SEFPS FY G +Q+GVT +R G+ PW P P+ F + G E+
Sbjct: 532 VQYRMHPAISEFPSRHFYSGRVQSGVTQQDRPPVRGV--PWTNPACPVLFINIAEGSEQQ 589
Query: 680 SASGTS------------YLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVN 727
+ +G + Y N EA K + L+ I +++PY GQ + +
Sbjct: 590 ALAGNNRRGGSGDSSGASYSNSEEAEVAMKALQRVLQEDDSVQSIVLLSPYNGQVRLLTS 649
Query: 728 YMSR----NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNV 783
+SR GA + +I V++VD +QGRE D +I S VRSN +GFL+D RRLNV
Sbjct: 650 LLSRAELPEGAADR---CQITVSTVDGYQGRESDVVIFSTVRSNPAGRVGFLSDERRLNV 706
Query: 784 ALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 820
A+TRAR G+++LGN L P W + E L
Sbjct: 707 AITRARRGLIVLGNQATLQHDPNWGAWMQWVAEQRRL 743
>gi|426193612|gb|EKV43545.1| hypothetical protein AGABI2DRAFT_210326 [Agaricus bisporus var.
bisporus H97]
Length = 927
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 249/487 (51%), Gaps = 72/487 (14%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ--VLVCA 441
G P LN SQ+ A+ +++ + ISL+QGPPGTGKT T + + + +LVC
Sbjct: 372 GDPDFKHLNKSQIKAMATMIGKRISLVQGPPGTGKTKTIVETIKLLKLHFEVSHPILVCT 431
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVS---SPVEHLTLHYQVRHLDTSEKSELHK 498
+NVAVD L E + GLK +R+ SR S ++HL L + ++ L + L K
Sbjct: 432 YTNVAVDNLLEGFAKAGLKPLRVGFGSRIRASLQEYSLDHLLLKHPLQPLLLETIALLDK 491
Query: 499 LQQ------------LKDEQGELSSS-----------------------DEKKYKALKRA 523
+++ LK +G+ S+ KKY L++
Sbjct: 492 MEEEIGQLGALIRDTLKKIEGKTPSAAMEQRVRNMSQAMGMKDRRRNELRAKKY-GLQQE 550
Query: 524 TEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVG 583
+I +SADV+C TC+ + L F V +DE++ +TEP LIP++ G++ + L+G
Sbjct: 551 MLHDIVKSADVVCSTCITSASSALNVADFPVVFVDEASMSTEPATLIPIMKGSRHLALIG 610
Query: 584 DHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGT 642
DH QL PVI+ ++A GLA SLFERL G+ P + L +QYRMHP +S FPS FY +
Sbjct: 611 DHKQLPPVIVSQEARAQGLAVSLFERLTEEGIVPSVMLDIQYRMHPRISHFPSLEFYNSS 670
Query: 643 LQNGVTINE-RQSSGIDFPWPVP-------------NRP-MFFYVQMGQEEISASGTSYL 687
+Q+G T + G++ P + +RP + F G E + SG S +
Sbjct: 671 IQDGTTDKDGNVVVGLEPPMSLTHLLQDGNHEGQSRSRPSVIFLDHFGYE--TMSGRSRV 728
Query: 688 NRTEAANVEKIVTTFLRSG--VVPSQIGVITPYEGQRAYIVNYMS---RNG-----ALRQ 737
N EA V +V L + IG+I PY Q + ++ RNG L
Sbjct: 729 NHHEAQIVVSLVEDLLLQNPQLRGQDIGIIAPYVAQINLLNRLLTTDVRNGERFREVLGN 788
Query: 738 QLYK---EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 794
Q Y+ ++EV +VD F+GREK+ I+ S VR+N+ IGFL D RRLNV LTRA+ G+ +
Sbjct: 789 QRYRDMSDVEVKTVDGFEGREKEVIVFSTVRNNDSGRIGFLADRRRLNVGLTRAKRGLFV 848
Query: 795 LGNPKVL 801
+G + +
Sbjct: 849 VGGMRTI 855
>gi|53715040|ref|YP_101032.1| helicase [Bacteroides fragilis YCH46]
gi|52217905|dbj|BAD50498.1| putative helicase [Bacteroides fragilis YCH46]
Length = 634
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 244/465 (52%), Gaps = 43/465 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R T P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RETYPVRF-----PWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFEGHPAYT 291
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E ++ + +RATE EI + D VI T
Sbjct: 292 ELWGIRKSIREMGNRMRKSSYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILTGRRFTTLFIDEAAQALEAACWIA-IRKADRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL Q+L E++ + + L +VQYRMH S+ +F S FY+G LQ + R +D
Sbjct: 411 NGLEQTLMEKVAANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLD 470
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS----GVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R V+ +I
Sbjct: 471 LPMSW-IDTSEMEFH-----EEFIGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERI 524
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + + + +I + +VD FQG+E+D I +S VR+NE
Sbjct: 525 DFGLISPYKAQVQYLRGKL-KGCSFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDG 583
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
IGFLND RR+NVA+TRAR +VILG+ +SK + L+ + +
Sbjct: 584 QIGFLNDLRRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|298385061|ref|ZP_06994620.1| DNA helicase [Bacteroides sp. 1_1_14]
gi|298262205|gb|EFI05070.1| DNA helicase [Bacteroides sp. 1_1_14]
Length = 651
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 240/466 (51%), Gaps = 43/466 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 200 RELYPVRF-----PWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHR-E 253
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFENHPSYP 309
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 310 ELWGIRKSIREMGSRMRRGSYSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTL 369
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 370 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEAAR 428
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ FPS FY G L+ + R D
Sbjct: 429 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMRFPSEWFYNGELEAAPEVRNRGILDFD 488
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI 712
P W + M F+ EE +N+ EA +E ++ ++ ++ I
Sbjct: 489 TPMNW-IDTSEMDFH-----EEFVGESFGRINKQEANLLLQELEAYISRIGKARILDESI 542
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + R + + I V +VD FQG+E+D + +S VR+NE
Sbjct: 543 DFGLISPYKAQVQYLRSKI-RGSSFLRPFRSLITVNTVDGFQGQERDVVFISLVRANEDG 601
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
IGFLND RR+NVA+TRAR +VILG+ L+K + L+T+ K+
Sbjct: 602 QIGFLNDLRRMNVAITRARMKLVILGDATTLTKHAFYRKLITYIKQ 647
>gi|387790987|ref|YP_006256052.1| ATPase [Solitalea canadensis DSM 3403]
gi|379653820|gb|AFD06876.1| Putative ATPase (DUF699) [Solitalea canadensis DSM 3403]
Length = 642
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 174/559 (31%), Positives = 273/559 (48%), Gaps = 74/559 (13%)
Query: 299 VGHVIKLTAQEEVALELRASQGVPVDINHG-FSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
V VI ++ + L L A + +P IN G +D ++ TS+ M ++ A + +
Sbjct: 97 VEGVIGTALKDRLRLYLNADE-LPEWINDGKIGIDLLFDETSYKEMDDTLRIVAEAQNNR 155
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLP----ELNASQVFAVKSVLQ-RPISLIQG 412
+ LLGH P F A +LN SQ AV ++L ++++ G
Sbjct: 156 LAELREILLGHS----------PASFSADFYTSESQQLNTSQNSAVHNILNANDVAIVHG 205
Query: 413 PPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAV 472
PPGTGKT T + + + + QVLV APSN AVD L E++SA GL VVR+ +R V
Sbjct: 206 PPGTGKTTTFVEAIKQVTLK-EKQVLVTAPSNTAVDLLCERLSAQGLNVVRIGHPAR--V 262
Query: 473 SSPVEHLTLHYQVRHLD--TSEKSELHKLQQLKD--------------EQGELSSSDEKK 516
+ L + ++ + KS K ++ ++ Q +L ++ +
Sbjct: 263 GDHLADLVIDNKISQHEYFNDIKSIRKKAEEFRNMAFKYKRNFGKEESRQRQLLFNEARS 322
Query: 517 YK----ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL 572
K L+ +I A VI CT VG+ + L + +F+ V IDE+ QA EP C IP
Sbjct: 323 LKQEAIKLEDYIVSDILSEAQVIACTLVGSNNSVLRDRQFKTVFIDEAAQALEPACWIP- 381
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
++ A++V++ GDHCQL P + +A + GL +LFE+++ L+VQYRM+ ++ E
Sbjct: 382 IMKAQRVIMAGDHCQLPPTVKSYEAGKQGLNVTLFEKVIERQKVDTLLEVQYRMNKAIME 441
Query: 633 FPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTE- 691
F + FY G L T+ R+ D P+ F I +G + RTE
Sbjct: 442 FSNQQFYRGKLTAFETVANRKLVKED------ENPLLF--------IDTAGCGFNERTEN 487
Query: 692 ---AANVEK--IVTTFLRSGVVP------------SQIGVITPYEGQRAYIVNYMSRNGA 734
A+N E+ ++ +L + ++GVI+PY+ Q +++ + N
Sbjct: 488 GRSASNPEEGNLLMNYLNDYLQQLTNYDNEVMDKIRRVGVISPYKAQVSFLTEQLE-NFE 546
Query: 735 LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 794
L K+I +VD FQG+E D I +S VRSNE IGFL D RR+NVA+TRA+ ++I
Sbjct: 547 TLASLGKKISFNTVDGFQGQECDLIAISLVRSNEKNEIGFLADTRRMNVAITRAKKKLLI 606
Query: 795 LGNPKVLSKQPLWNGLLTH 813
+G+ LS P + L H
Sbjct: 607 IGDSATLSSHPFYASFLDH 625
>gi|221051872|ref|XP_002257512.1| erythrocyte membrane-associated antigen,putative [Plasmodium knowlesi
strain H]
gi|193807342|emb|CAQ37847.1| erythrocyte membrane-associated antigen,putative [Plasmodium knowlesi
strain H]
Length = 2351
Score = 229 bits (583), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 222/430 (51%), Gaps = 39/430 (9%)
Query: 388 LPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVA 446
LP LN SQ A S L R ++L+QGPPGTGKT + AI+ +Q + +L A SNVA
Sbjct: 1842 LP-LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHRQNSNKKILAVADSNVA 1900
Query: 447 VDQLAEKISATGLKVVRLCAKS-----REAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 501
+ L E + ++ VR+ A S EA+ +D +L KL++
Sbjct: 1901 ANNLVEGLKKRNIQAVRVGAGSDSDFHEEAI---------------MDFHRYKDLLKLRK 1945
Query: 502 LKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDEST 561
++ +K+ K +K E + +V+ TCVG+G N +F +V+IDE
Sbjct: 1946 ---------NNLQKEAKVMKALLFLEAVRKYNVVIATCVGSGHEIFDNEKFERVIIDECA 1996
Query: 562 QATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-L 620
Q+ EP LIPL +VL+GDH QL P I+ A + GL +SL ER V+ + P+ L
Sbjct: 1997 QSIEPSNLIPLGHNCTNLVLIGDHKQLPPTIISSDATKLGLDRSLLERFVMAKIAPVHLL 2056
Query: 621 QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN-RPMFFYVQMGQ--- 676
Q RMH S+ FP+ FY+ L+ E + F WP P R F V +G+
Sbjct: 2057 TTQRRMHLSICTFPNIHFYDNKLKTENVTEENRPIIKGFLWPNPKCRLAFIDVSLGKPGS 2116
Query: 677 EEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIVNYMSRNGAL 735
+ +A GTS N E + ++ + + G V +IG++T Y+ Q+ + + A
Sbjct: 2117 KFENAYGTSKFNLYEIEPLIAVLKSIVNEGCVSVDEIGILTAYDAQKVKLKKAVQ--DAF 2174
Query: 736 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
+ IE+ S+D FQG+EKD I+ S VRSN + +GFL D RRLNV LTRA+ G+++
Sbjct: 2175 PYEAACRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLKDARRLNVMLTRAKRGVILF 2234
Query: 796 GNPKVLSKQP 805
G+ L+ P
Sbjct: 2235 GDQFTLANDP 2244
>gi|383116067|ref|ZP_09936820.1| hypothetical protein BSHG_3112 [Bacteroides sp. 3_2_5]
gi|251945242|gb|EES85680.1| hypothetical protein BSHG_3112 [Bacteroides sp. 3_2_5]
Length = 634
Score = 229 bits (583), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 244/465 (52%), Gaps = 43/465 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R T P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RATYPVRF-----PWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFEGHPAYT 291
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E ++ + +RATE EI + D VI T
Sbjct: 292 ELWGIRKSIREMGNRMRKSSYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILTGRRFTTLFIDEAAQALEAACWIA-IRKADRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL Q+L E++ + + L +VQYRMH S+ +F S FY+G LQ + R +D
Sbjct: 411 NGLEQTLMEKVAANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLD 470
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS----GVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R V+ +I
Sbjct: 471 LPMSW-IDTSEMEFH-----EEFIGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERI 524
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + + + +I + +VD FQG+E+D I +S VR+NE
Sbjct: 525 DFGLISPYKAQVQYLRGKL-KGCSFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDG 583
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
IGFLND RR+NVA+TRAR +VILG+ +SK + L+ + +
Sbjct: 584 QIGFLNDLRRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|212693586|ref|ZP_03301714.1| hypothetical protein BACDOR_03103 [Bacteroides dorei DSM 17855]
gi|212663839|gb|EEB24413.1| putative DNA helicase [Bacteroides dorei DSM 17855]
Length = 630
Score = 229 bits (583), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 241/456 (52%), Gaps = 40/456 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
FG P LN SQ AV V+ + ++++ GPPGTGKT T +Y + + QV+VCA
Sbjct: 184 FGFTRFPWLNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCA 242
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R H D + + K
Sbjct: 243 QSNMAVDWISEKLVDRGIPVLRIGNPTR--VNDKM--LSFTYERRFESHPDYPQLWSIRK 298
Query: 499 -LQQL--KDEQGELSSSDEKKYKALK-RATEREIS------QSADVICCTCVGAGDPRLA 548
+++L + +G + K +LK RATE EI A VI CT V + + L
Sbjct: 299 AIRELYSRSRKGAERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVLT 358
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
RF + IDE+ QA EP C I + A ++VL GDHCQL P I C +AAR GL Q+L +
Sbjct: 359 GRRFGTLFIDEAAQALEPACWIA-IRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQ 417
Query: 609 RLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
+V + + L +VQYRM+ + F S FY+G L++ + R D P N
Sbjct: 418 EIVQNKPETVSLLKVQYRMNDEIMHFSSEWFYQGELKSAPEVKYRGILDYDTPIEWVNTE 477
Query: 668 MFFYVQMGQEEISASGTSYLNRTEAA--------NVEKI-VTTFLRSGVVPSQIGVITPY 718
EE +N+ EAA + KI FL + +G+I+PY
Sbjct: 478 GM----NCNEEFVGESFGRINKAEAALSISQLTHYINKIGKERFLEERI---DVGLISPY 530
Query: 719 EGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
+ Q Y+ + R+ + Y+ I + +VD FQG+E+D I++S VR+NE IGFLND
Sbjct: 531 KAQVQYLRQLIKRDAFFKP--YRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLND 588
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
RR+NVA+TRAR ++ILG+ L+K P + L +
Sbjct: 589 LRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|389581976|dbj|GAB64376.1| erythrocyte membrane-associated antigen [Plasmodium cynomolgi strain
B]
Length = 2167
Score = 229 bits (583), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 219/422 (51%), Gaps = 28/422 (6%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQ 449
LN SQ A S L R ++L+QGPPGTGKT + AI+ +Q + +L A SNVA +
Sbjct: 1660 LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHRQNSNKKILAVADSNVAANN 1719
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGEL 509
L E + ++ VR+ A S ++ +D +L KL++
Sbjct: 1720 LVEGLKKRNIQAVRVGAGSDSDF----------HEEAIMDFHRYKDLLKLRK-------- 1761
Query: 510 SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECL 569
++ +K+ K +K E + +V+ TCVG+G N +F +V+IDE Q+ EP L
Sbjct: 1762 -NNLQKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPSNL 1820
Query: 570 IPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQYRMHP 628
IPL +VL+GDH QL P I+ A + GL +SL ER V+ + P+ L Q RMH
Sbjct: 1821 IPLGHNCNNLVLIGDHKQLPPTIISSDATKLGLDRSLLERFVMAKIAPVHLLTTQRRMHL 1880
Query: 629 SLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN-RPMFFYVQMGQ---EEISASGT 684
S+ FP+ FY+ L+ E + F WP P R F V +G+ + ++ GT
Sbjct: 1881 SICTFPNIHFYDNKLKTENVTEENRPIIKGFLWPNPKCRLAFIDVSLGKPGSKFENSYGT 1940
Query: 685 SYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S N E + ++ + + G V +IG++T Y+ Q+ + + A + I
Sbjct: 1941 SKFNLYEIEPLISVLKSIVNEGCVSVDEIGILTAYDAQKVKLKKAVQ--DAFPYEAACRI 1998
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
E+ S+D FQG+EKD I+ S VRSN + +GFL D RRLNV LTRA+ G+++ G+ L+
Sbjct: 1999 EIDSIDGFQGKEKDLILFSAVRSNANNELGFLKDARRLNVMLTRAKRGVILFGDQFTLAN 2058
Query: 804 QP 805
P
Sbjct: 2059 DP 2060
>gi|189461769|ref|ZP_03010554.1| hypothetical protein BACCOP_02435 [Bacteroides coprocola DSM 17136]
gi|189431529|gb|EDV00514.1| putative DNA helicase [Bacteroides coprocola DSM 17136]
Length = 629
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 251/459 (54%), Gaps = 45/459 (9%)
Query: 380 PRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVL 438
P RF P LNA+Q A+ VL + ++++ GPPGTGKT T +VY + + QVL
Sbjct: 185 PLRF-----PWLNATQEEAMNKVLHAKDVAIVHGPPGTGKTTTLVEVVYETLHR-ENQVL 238
Query: 439 VCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSE 495
VCA SN+AVD ++EK+ G+ V+R+ SR V+ + L+ Y+ R H D +
Sbjct: 239 VCAQSNMAVDWISEKLVDRGVSVLRIGNPSR--VNDKM--LSFTYERRFESHPDYPQLWS 294
Query: 496 LHK-LQQL--KDEQGELSSSDEKKYKALK-RATEREIS------QSADVICCTCVGAGDP 545
+ K +++L + +G + +K +LK RATE EI A VI CT VG+ +
Sbjct: 295 IRKAIRELYARSRKGAEREAVRQKINSLKDRATELEIRINESLFSEARVIACTLVGSANR 354
Query: 546 RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQS 605
L +F + IDE+ QA E C IP + A +V+L GDHCQL P + +A RAGL +
Sbjct: 355 LLTGQKFGTLFIDEAAQALEAACWIP-IRKADRVILAGDHCQLPPTVKAPEALRAGLGHT 413
Query: 606 LFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP 664
L + +V + L ++QYRM+ + F S FY G LQ+ + R S +DF P+
Sbjct: 414 LMQTIVKNKPDTVSLLKLQYRMNDEIMRFSSEWFYGGMLQSAPEVKYR--SILDFDTPIE 471
Query: 665 NRPMFFYVQMG----QEEISASGTSYLNRTEAA-NVEKI---VTTFLRSGVVPSQI--GV 714
++ EE +N++EA ++E++ +T R + +I G+
Sbjct: 472 ------WINTEGLDCNEEFIGENYGRINKSEAELSIEQLKGYITKIGRERFLNERIDVGM 525
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
I+PY+ Q Y+ + RN A + + I + +VD FQG+E+D I++S VR+NE IGF
Sbjct: 526 ISPYKAQVQYL-RRLVRNDAFFKPYRQAITINTVDGFQGQERDVILISLVRANEEGQIGF 584
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
LND RR+NVA+TRAR ++ILG+ L++ + L T+
Sbjct: 585 LNDLRRMNVAITRARMKLIILGDASTLTRHAFYKKLYTY 623
>gi|336403156|ref|ZP_08583876.1| hypothetical protein HMPREF0127_01189 [Bacteroides sp. 1_1_30]
gi|335946894|gb|EGN08690.1| hypothetical protein HMPREF0127_01189 [Bacteroides sp. 1_1_30]
Length = 645
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 242/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 196 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 249
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 250 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 305
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 306 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 365
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +A+R
Sbjct: 366 VSSNHRLLNGRRFSTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEASR 424
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 425 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRGILDFD 484
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ E+ +N+ EA + + + T++ + ++ +I
Sbjct: 485 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELETYIERIGKERILDERI 538
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 539 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 597
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDTSTLAKHPFYKRLMLFIKKED 645
>gi|265755988|ref|ZP_06090455.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|423242331|ref|ZP_17223440.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei
CL03T12C01]
gi|263234066|gb|EEZ19667.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392639617|gb|EIY33433.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei
CL03T12C01]
Length = 630
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 241/456 (52%), Gaps = 40/456 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
FG P LN SQ AV V+ + ++++ GPPGTGKT T +Y + + QV+VCA
Sbjct: 184 FGFTRFPWLNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCA 242
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R H D + + K
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFESHPDYPQLWSIRK 298
Query: 499 -LQQL--KDEQGELSSSDEKKYKALK-RATEREIS------QSADVICCTCVGAGDPRLA 548
+++L + +G + K +LK RATE EI A VI CT V + + L
Sbjct: 299 AIRELYSRSRKGAERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVLT 358
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
RF + IDE+ QA EP C I + A ++VL GDHCQL P I C +AAR GL Q+L +
Sbjct: 359 GRRFGTLFIDEAAQALEPACWIA-IRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQ 417
Query: 609 RLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
+V + + L +VQYRM+ + F S FY+G L++ + R D P N
Sbjct: 418 EIVQNKPETVSLLKVQYRMNDEIMHFSSEWFYQGELKSAPEVKYRGILDYDTPIEWVNTE 477
Query: 668 MFFYVQMGQEEISASGTSYLNRTEAA--------NVEKI-VTTFLRSGVVPSQIGVITPY 718
EE +N+ EAA + KI FL + +G+I+PY
Sbjct: 478 GM----NCNEEFVGESFGRINKAEAALSISQLTHYINKIGKERFLEERI---DVGLISPY 530
Query: 719 EGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
+ Q Y+ + R+ + Y+ I + +VD FQG+E+D I++S VR+NE IGFLND
Sbjct: 531 KAQVQYLRQLIKRDAFFKP--YRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLND 588
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
RR+NVA+TRAR ++ILG+ L+K P + L +
Sbjct: 589 LRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|298479725|ref|ZP_06997925.1| DNA helicase [Bacteroides sp. D22]
gi|298274115|gb|EFI15676.1| DNA helicase [Bacteroides sp. D22]
Length = 649
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 242/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 200 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 253
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 309
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 310 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 369
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +A+R
Sbjct: 370 VSSNHRLLNGRRFSTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEASR 428
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 429 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRGILDFD 488
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ E+ +N+ EA + + + T++ + ++ +I
Sbjct: 489 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELETYIERIGKERILDERI 542
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 543 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 601
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 602 QIGFLNDLRRMNVAITRARMKLVILGDTSTLAKHPFYKRLMLFIKKED 649
>gi|366990359|ref|XP_003674947.1| hypothetical protein NCAS_0B04910 [Naumovozyma castellii CBS 4309]
gi|342300811|emb|CCC68575.1| hypothetical protein NCAS_0B04910 [Naumovozyma castellii CBS 4309]
Length = 1176
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 242/479 (50%), Gaps = 61/479 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVDQ 449
LN SQ AV+ VL I++IQGPPGTGKT T ++ + + ++C A SN+A+D
Sbjct: 707 LNESQRKAVQHVLNNRITVIQGPPGTGKTSTIEEVILQLIENFHSFPILCVAASNIAIDN 766
Query: 450 LAEKISAT--GLKVVRLCAKSREAV---SSPVEHLTLHYQVRHLDTSEKSEL-HKLQQLK 503
+AEKI T +K +R+ + +E+ P+ + LH V + E E+ KL+
Sbjct: 767 IAEKIIETRPNIKSLRILSDKKESQYGPDHPLGKICLHNMVYDRLSPEMREIASKLRS-- 824
Query: 504 DEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDESTQ 562
D +GE+S + + K+ ++ A ++ T + AG +L + V++DESTQ
Sbjct: 825 DRRGEVSRNQDNKFYTETTNISNKLIAQAQILFTTNITAGGRQLKVIKELPVVIMDESTQ 884
Query: 563 ATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG--LKPIR 619
++E L+PL L G K V VGD QL + L SLFER++ G +P
Sbjct: 885 SSEASTLVPLSLPGIKNFVFVGDEKQLSSF-----SNIPQLEMSLFERILANGSYREPNM 939
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYV------- 672
L QYRMHP +S+FP FY G L++GVT + GI + P+FFY
Sbjct: 940 LDTQYRMHPRISDFPIKKFYHGKLKDGVTAENKMWDGIQY-------PLFFYQCDKGPEG 992
Query: 673 QMGQEEISASGTSYLNRTEAANVEKIV-TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSR 731
++ + +Y N E + K+V +L V IG+ITPY QR + +
Sbjct: 993 RVVNNQNGMRAFTYNNIFECQEIIKLVYKLYLEKNVKLEDIGIITPYSSQRDLLSQMFVK 1052
Query: 732 N--------GALRQQLYKE-------------------IEVASVDSFQGREKDYIILSCV 764
+ G L++ E + VA+VDSFQG EK++II SCV
Sbjct: 1053 DAVVNPLGKGMLQETDEAEFLNSRRNDIQSHTVNIINGLHVATVDSFQGHEKNFIIFSCV 1112
Query: 765 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLVE 822
R+N IGFL D RRLNVALTRA+ G++++GN +VL + LW + + +E E + +
Sbjct: 1113 RNNAENKIGFLRDRRRLNVALTRAKNGLIVVGNKEVLKRGDHLWRDFVQYLEEQEVVFD 1171
>gi|405119638|gb|AFR94410.1| DNA helicase [Cryptococcus neoformans var. grubii H99]
Length = 903
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 232/448 (51%), Gaps = 44/448 (9%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCA 441
G P +P LN +Q+ A+ +L +SL+QGPPGTGKT + + Q +LVCA
Sbjct: 453 GDPYIP-LNRTQLRAMGMMLSEALSLVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVCA 511
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 501
+NVAVD L + G+K +R R L + + + TS ++ + K ++
Sbjct: 512 HTNVAVDNLLAGMIKHGVKAIRTGMAERVPADLKQYSLEIKMESHPMWTSVQTMVEKAKR 571
Query: 502 LKDE-----------QGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLA 548
LKDE Q ++S + ++ ++++ RE+ ADV+C TC+ A L
Sbjct: 572 LKDEIFRMDFGNPERQQKISEMKKIWRQIWGIRQSITRELLLDADVVCTTCISAISANLN 631
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
+ F V +DE++ ATEP L+PL+ G+ V ++GDH QL PVI+ + A GL+ SLFE
Sbjct: 632 SIDFPIVFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFE 691
Query: 609 RLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW---PVP 664
RL+ P I L QYRMHPSL+ F S +FY L+NG +ER F P+P
Sbjct: 692 RLIHEKDVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTPASERPPPETAFLIPEDPIP 751
Query: 665 NRPMFFYVQMGQEEISASGT-----------SYLNRTEAANVEKIVTTFLRSG--VVPSQ 711
+ P +++ E+ + + S N EA + +VT L + SQ
Sbjct: 752 D-PSTGELRLSGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPDLKGSQ 810
Query: 712 IGVITPYEGQRAYIVN--YMSRN--------GALRQQLYKEIEVASVDSFQGREKDYIIL 761
IG+I PY GQ + + SR G R + +++E+ +VD F+GREK+ II
Sbjct: 811 IGIIAPYLGQIKVVSETLFASRTQDSLKTILGDERTEEVQDVEIKTVDGFEGREKEVIIF 870
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRAR 789
S VRSN IGFL D RR+NV LTRAR
Sbjct: 871 STVRSNAGGYIGFLGDWRRVNVGLTRAR 898
>gi|82596421|ref|XP_726255.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481586|gb|EAA17820.1| nam7 protein [Plasmodium yoelii yoelii]
Length = 1791
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 230/462 (49%), Gaps = 43/462 (9%)
Query: 362 YHHLLGHEVEVQM-------VRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
Y LL + Q+ V L P LN SQ A S L R ++L+QGPP
Sbjct: 1250 YEDLLNEALNKQIGNTYLEDVDQYLVESINLPTNLPLNDSQKLACLSALTRRLTLVQGPP 1309
Query: 415 GTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS 473
GTGKT + AI+ +Q + +L A SNVA + L E + ++ VR+ A S
Sbjct: 1310 GTGKTHVACAIIDSWHRQNSSKKILAVADSNVAANNLVEGLKKRNIQAVRVGAGSDS--- 1366
Query: 474 SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
D E++ + + + KD ++ +K+ K +K E + +
Sbjct: 1367 ---------------DFHEEA-IMEFHRYKDLLKLRKNNMQKEAKVMKALLFLEAVKKYN 1410
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM 593
V+ TCVG+G N +F +V+IDE Q+ EP LIPL +VL+GDH QL P I+
Sbjct: 1411 VVIATCVGSGHEIFDNEKFERVIIDECAQSIEPSNLIPLGHYCTNLVLIGDHKQLPPTII 1470
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
A + GL +SL ER V+ + PI L Q RMH S+ FP+ FY+ L+ E
Sbjct: 1471 SPDAIKLGLDKSLLERFVMAKIAPIHLLSTQRRMHLSICTFPNFHFYDNKLKTANVTEEN 1530
Query: 653 QSSGIDFPWPVPN-RPMFFYVQMGQ---EEISASGTSYLNRTEAANVEKIVTTFLRSGVV 708
+ F WP P R +F V +G+ + +A GTS N E + ++ + + G V
Sbjct: 1531 RPIIKGFLWPNPKCRLVFIDVSLGKPGSKFENAYGTSKFNLYEIEPLIAVLKSIVNEGCV 1590
Query: 709 P-SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE----IEVASVDSFQGREKDYIILSC 763
+IG++T Y+ Q+ + A+++ E IE+ S+D FQG+EKD I+ S
Sbjct: 1591 SVDEIGILTAYDAQK------IKLKKAVQETFPYEAAHRIEIDSIDGFQGKEKDLILFSA 1644
Query: 764 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 805
VRSN + +GFL D RRLNV LTRA+ G++I G+ L+ P
Sbjct: 1645 VRSNANNELGFLRDARRLNVMLTRAKRGVIIFGDQFTLANDP 1686
>gi|423298652|ref|ZP_17276707.1| hypothetical protein HMPREF1070_05372 [Bacteroides ovatus
CL03T12C18]
gi|392662021|gb|EIY55587.1| hypothetical protein HMPREF1070_05372 [Bacteroides ovatus
CL03T12C18]
Length = 645
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 242/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 196 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 249
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 250 PQVLVCAQSNTAVDWICEKLVDRGVAVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 305
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 306 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 365
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +A+R
Sbjct: 366 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEASR 424
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 425 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRGILDFD 484
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ E+ +N+ EA + + + T++ + ++ +I
Sbjct: 485 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELETYIERIGKKRILDERI 538
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 539 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 597
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKED 645
>gi|29347483|ref|NP_810986.1| helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|29339383|gb|AAO77180.1| putative helicase [Bacteroides thetaiotaomicron VPI-5482]
Length = 652
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 240/467 (51%), Gaps = 43/467 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 200 RELYPVRF-----PWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHR-E 253
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R + S
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFENHSAYP 309
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 310 ELWGIRKSIREMGSRMRRGSYSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTL 369
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 370 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEAAR 428
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ FPS FY G L+ + R D
Sbjct: 429 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMRFPSEWFYNGELEAAPEVRNRGILDFD 488
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI 712
P W + M F+ EE +N+ EA +E ++ ++ ++ I
Sbjct: 489 TPMNW-IDTSEMDFH-----EEFVGESFGRINKQEANLLLQELEAYISRIGKARILDESI 542
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + R + + I V +VD FQG+E+D + +S VR+NE
Sbjct: 543 DFGLISPYKAQVQYLRSKI-RGSSFLRPFRSLITVNTVDGFQGQERDVVFISLVRANEDG 601
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
IGFLND RR+NVA+TRAR +VILG+ L+K + L+ + ++
Sbjct: 602 QIGFLNDLRRMNVAITRARMKLVILGDATTLTKHAFYRKLIQYIRQE 648
>gi|345507626|ref|ZP_08787273.1| hypothetical protein BSAG_02536 [Bacteroides sp. D1]
gi|345455366|gb|EEO50825.2| hypothetical protein BSAG_02536 [Bacteroides sp. D1]
Length = 645
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 242/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 196 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 249
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 250 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 305
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 306 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 365
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +A+R
Sbjct: 366 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEASR 424
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 425 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRGILDFD 484
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ E+ +N+ EA + + + T++ + ++ +I
Sbjct: 485 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELETYIERIGKERILDERI 538
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 539 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 597
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDTSTLAKHPFYKRLMLFIKKED 645
>gi|365983354|ref|XP_003668510.1| hypothetical protein NDAI_0B02320 [Naumovozyma dairenensis CBS 421]
gi|343767277|emb|CCD23267.1| hypothetical protein NDAI_0B02320 [Naumovozyma dairenensis CBS 421]
Length = 1185
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 245/484 (50%), Gaps = 66/484 (13%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVDQ 449
LN SQ AV+ VL I++IQGPPGTGKT T I+ + + ++C A SN+A+D
Sbjct: 713 LNDSQKLAVQHVLNNSITVIQGPPGTGKTSTIEEIILQLIENFHSFPILCVAASNIAIDN 772
Query: 450 LAEKI--SATGLKVVRLCAKSREAV---SSPVEHLTLHYQVRHLDTSEKSELHKLQQLKD 504
+AEKI S +K++R+ + +E+ P+ + LH ++ + E ++ +
Sbjct: 773 IAEKIMESRPNIKILRILSDKKESQYGPDHPLGKICLHNKIYERLSPEMKDIANKFRF-G 831
Query: 505 EQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDESTQA 563
+ E+S + + KY K + ++ +I T + AG +L + V++DESTQ+
Sbjct: 832 RRDEVSKNQDNKYYQEKTSITNKLVAQTQIIFTTNITAGGRQLKVIKELPVVIMDESTQS 891
Query: 564 TEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KPIRL 620
+E L+PL L G K+ V VGD QL + L SLFER++ G +P L
Sbjct: 892 SEASTLVPLSLPGIKKFVFVGDEKQLSSF-----SNIPHLEMSLFERILANGTYEQPHML 946
Query: 621 QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY--------- 671
QYRMHP +S+FP + FY G L++GVT ++Q P P+FFY
Sbjct: 947 DTQYRMHPQISKFPIHKFYYGELKDGVTAEQKQ-------LPNIKHPLFFYQSNNGYEST 999
Query: 672 VQMGQEEISASGTSYLNRTEAANVEKIVTTF-LRSGVVPSQIGVITPYEGQRAYIVNYMS 730
V+ Q I A +Y N+ E ++ KI+ L V +IG+ITPY QR + +
Sbjct: 1000 VENRQNGIKA--FTYNNKYECQDILKILYKLILEKNVKHEEIGIITPYSAQRDLLSELLV 1057
Query: 731 RN------GALRQQLYKEIE------------------------VASVDSFQGREKDYII 760
+ G +Q E E VA+VDSFQG EK++II
Sbjct: 1058 ADPVVNPYGRSMEQETDEAEFLNSKHTLGNDIQSHTVNIINGLHVATVDSFQGHEKNFII 1117
Query: 761 LSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHEC 819
SCVR+N IGFL D RRLNVALTR++ G++++GN +VL K LW + ++ +
Sbjct: 1118 FSCVRNNPENKIGFLRDRRRLNVALTRSKNGLILVGNKEVLKKGDNLWRDFMVFLEKEKV 1177
Query: 820 LVEG 823
+ +
Sbjct: 1178 IFDS 1181
>gi|375146785|ref|YP_005009226.1| ATPase AAA [Niastella koreensis GR20-10]
gi|361060831|gb|AEV99822.1| ATPase AAA [Niastella koreensis GR20-10]
Length = 633
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 264/513 (51%), Gaps = 50/513 (9%)
Query: 331 VDFVWKSTSFDRMQGAMKTFA-VDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLP 389
+D ++ S+D MQ A K A + E G + L G++ N+ P +
Sbjct: 124 IDLLFDENSYDEMQNACKLAASLAEKPAEGRLIQILTGNKAP--SFENSAP-----VAVS 176
Query: 390 ELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
LN+SQ AV +LQ ++++ GPPGTGKT T + M K+ Q+LV APSN AVD
Sbjct: 177 NLNSSQQAAVNKILQANDLAIVHGPPGTGKTTTLVQAIKAMIKKDNQQILVVAPSNTAVD 236
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKSELHK--------L 499
L+EK+S GL V+R+ +R VS + LTL Y++ H T E L K
Sbjct: 237 LLSEKLSDEGLNVLRVGNPAR--VSERLLSLTLDYKMADHPHTKEIKRLKKQASAFMDMA 294
Query: 500 QQLKDEQGELSSSDEKKYKALKRATEREISQS-----------ADVICCTCVGAGDPRLA 548
+ K G+ K A R +E+ S A VI T +G+ +
Sbjct: 295 HKYKRHFGKAERDQRKALFAEARNIMKEVDNSEQYIIKDLVAKAQVITATLLGSNHYTVR 354
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
N +F V+IDE+ QA EP C +P +L A++VVL GDHCQL P + +AA+ GLA +L E
Sbjct: 355 NLKFNTVVIDEAGQALEPACWVP-ILKAQKVVLAGDHCQLPPTVKSAEAAQNGLATTLLE 413
Query: 609 RLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
+ V L + + L+ QYRMH + + S++FY+ L+ ++ + + F + P
Sbjct: 414 KCVALHPEAEVLLEEQYRMHEMIMGYSSSTFYDDRLKAHASV----ARHVLFS---NDNP 466
Query: 668 MFFY--VQMGQEEISASGTSYLNRTEAANVEKIVTTF---LRSGVVPSQ---IGVITPYE 719
+ F G +E + ++Y N EAA + + +T L S P I +I+PY+
Sbjct: 467 LVFVDTAGCGFDEKTEQTSTY-NPEEAAFLFRHLTQLVSSLDSHYKPENFPSIAIISPYK 525
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
Q + + AL+ +K I + ++DSFQG+E+D + +S RSN IGFL+D R
Sbjct: 526 QQIDTLKQQFLSSPALQAYGHK-IAINTIDSFQGQERDIVYISMTRSNPDNRIGFLSDIR 584
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLT 812
R+NVA+TRAR +V++G+ LS+ +N ++
Sbjct: 585 RMNVAMTRARKKLVVIGDSATLSQFDFYNNFIS 617
>gi|423215342|ref|ZP_17201869.1| hypothetical protein HMPREF1074_03401 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691910|gb|EIY85150.1| hypothetical protein HMPREF1074_03401 [Bacteroides xylanisolvens
CL03T12C04]
Length = 645
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 242/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 196 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 249
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 250 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 305
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 306 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 365
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +A+R
Sbjct: 366 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEASR 424
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 425 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRGILDFD 484
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ E+ +N+ EA + + + T++ + ++ +I
Sbjct: 485 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELETYIERIGKERILDERI 538
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 539 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 597
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDASTLAKHPFYKRLMLFIKKED 645
>gi|262407014|ref|ZP_06083563.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294805767|ref|ZP_06764646.1| putative DNA helicase [Bacteroides xylanisolvens SD CC 1b]
gi|262355717|gb|EEZ04808.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294447090|gb|EFG15678.1| putative DNA helicase [Bacteroides xylanisolvens SD CC 1b]
Length = 649
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 242/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 200 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 253
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 309
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 310 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 369
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +A+R
Sbjct: 370 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEASR 428
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 429 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRGILDFD 488
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ E+ +N+ EA + + + T++ + ++ +I
Sbjct: 489 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELETYIERIGKERILDERI 542
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 543 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 601
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 602 QIGFLNDLRRMNVAITRARMKLVILGDTSTLAKHPFYKRLMLFIKKED 649
>gi|436833526|ref|YP_007318742.1| AAA ATPase [Fibrella aestuarina BUZ 2]
gi|384064939|emb|CCG98149.1| AAA ATPase [Fibrella aestuarina BUZ 2]
Length = 632
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 270/517 (52%), Gaps = 52/517 (10%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
V+ ++ S+D M+ A+KT + L G +V T + AP L
Sbjct: 122 LGVEVLFDDNSYDEMEAALKTANTLSQKPGHPLIPILTGEQVP------TFNAQTPAPVL 175
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P+LN SQV AV +L ++++ GPPGTGKT T + + KQ + ++LV APSN AV
Sbjct: 176 PQLNPSQVAAVHKILSANELAIVHGPPGTGKTTTLIQAIKALIKQDRQKLLVVAPSNTAV 235
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEK---------SE 495
D L+EK+ GL V+R+ +R VS + LTL ++V H++ ++K +
Sbjct: 236 DLLSEKLHDEGLNVLRIGNPAR--VSERLMALTLDHKVSTHPHMNAAKKLKKQANEFRTM 293
Query: 496 LHKLQQL--KDEQGELSSSDEKKYKALKRATERE------ISQSADVICCTCVGAGDPRL 547
HK ++ K E+ + + ++ ++ LK + E + +A V+ T VGA + +
Sbjct: 294 AHKYKRNFGKAEREQRKALFDEAHRLLKDVGQAEQYVIDDLIANAQVVTATLVGANNYTV 353
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
+ + V+IDE+ QA EP C IP +L A++VVL GDHCQL P I +AAR GL +L
Sbjct: 354 RDLTYHTVVIDEAGQALEPACWIP-ILKAQKVVLAGDHCQLPPTIKSAEAARNGLGTTLL 412
Query: 608 ERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR 666
E+ V L + + L QYRMH + + S FY+ ++ ++ R + D +
Sbjct: 413 EKCVALHPEAVTLLNEQYRMHEHIMGYSSQVFYDNQVKAHPSV-ARHALFAD------DT 465
Query: 667 PMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRS-------GVVPSQIGVIT 716
+ F G E++ GTS N EAA + + +T + G P+ I VI+
Sbjct: 466 ALAFVDTAGCGFDEKLD--GTSSTNPDEAALLIRHLTQLVGDLSQRYSLGTFPT-IAVIS 522
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PY+ Q+ ++ +N Q I V ++DSFQG+E+D + +S VRSN IGFL+
Sbjct: 523 PYK-QQINVLTEQLKNSPELQPYSGHISVNTIDSFQGQERDIVYISLVRSNTEGDIGFLS 581
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
D RR+NVA+TRAR +VI G+ L+ P ++ +T+
Sbjct: 582 DIRRMNVAMTRARKKLVIFGDSATLASLPFYSDFITY 618
>gi|345513474|ref|ZP_08792995.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
gi|229437375|gb|EEO47452.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
Length = 630
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 240/456 (52%), Gaps = 40/456 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
FG P LN SQ AV V+ + ++++ GPPGTGKT T +Y + + QV+VCA
Sbjct: 184 FGFTRFPWLNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCA 242
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++EK+ G+ V+R+ +R V+ + T Y+ R H D + + K
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR--VNDKMLFFT--YERRFESHPDYPQLWSIRK 298
Query: 499 -LQQL--KDEQGELSSSDEKKYKALK-RATEREIS------QSADVICCTCVGAGDPRLA 548
+++L + +G + K +LK RATE EI A VI CT V + + L
Sbjct: 299 AIRELYSRSRKGAERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVLT 358
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
RF + IDE+ QA EP C I + A ++VL GDHCQL P I C +AAR GL Q+L +
Sbjct: 359 GRRFGTLFIDEAAQALEPACWIA-IRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQ 417
Query: 609 RLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
+V + + L +VQYRM+ + F S FY+G L++ + R D P N
Sbjct: 418 EIVQNKPETVSLLKVQYRMNDEIMHFSSEWFYQGELKSAPEVKYRGILDYDTPIEWVNTE 477
Query: 668 MFFYVQMGQEEISASGTSYLNRTEAA--------NVEKI-VTTFLRSGVVPSQIGVITPY 718
EE +N+ EAA + KI FL + +G+I+PY
Sbjct: 478 GM----NCNEEFVGESFGRINKAEAALSISQLTHYINKIGKERFLEERI---DVGLISPY 530
Query: 719 EGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
+ Q Y+ + R+ + Y+ I + +VD FQG+E+D I++S VR+NE IGFLND
Sbjct: 531 KAQVQYLRQLIKRDAFFKP--YRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLND 588
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
RR+NVA+TRAR ++ILG+ L+K P + L +
Sbjct: 589 LRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|68076201|ref|XP_680020.1| erythrocyte membrane-associated antigen [Plasmodium berghei strain
ANKA]
gi|56500887|emb|CAI00225.1| erythrocyte membrane-associated antigen, putative [Plasmodium
berghei]
Length = 1480
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 230/462 (49%), Gaps = 43/462 (9%)
Query: 362 YHHLLGHEVEVQM-------VRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
Y LL + Q+ V L P LN SQ A S L R ++L+QGPP
Sbjct: 940 YEDLLNEALNKQIGNTYLEDVDQYLVESINLPTNLPLNDSQKLACLSALTRRLTLVQGPP 999
Query: 415 GTGKTVTSAAIVYHMAKQGQGQ-VLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVS 473
GTGKT + AI+ +Q + +L A SNVA + L E + ++ VR+ A S
Sbjct: 1000 GTGKTHVACAIIDSWHRQNSSKKILAVADSNVAANNLVEGLKKRNIQAVRVGAGSDS--- 1056
Query: 474 SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSAD 533
D E++ + + + KD ++ +K+ K +K E + +
Sbjct: 1057 ---------------DFHEEA-IMEFHRYKDLLKLRKNNMQKEAKVMKALLFLEAVKKYN 1100
Query: 534 VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM 593
V+ TCVG+G N +F +V+IDE Q+ EP LIPL +VL+GDH QL P I+
Sbjct: 1101 VVIATCVGSGHEIFDNEKFERVIIDECAQSIEPSNLIPLGHYCTNLVLIGDHKQLPPTII 1160
Query: 594 CKKAARAGLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
A + GL +SL ER V+ + PI L Q RMH S+ FP+ FY+ L+ E
Sbjct: 1161 SPDAIKLGLDKSLLERFVMAKIAPIHLLSTQRRMHLSICTFPNFHFYDNKLKTANVTEEN 1220
Query: 653 QSSGIDFPWPVPN-RPMFFYVQMGQ---EEISASGTSYLNRTEAANVEKIVTTFLRSGVV 708
+ F WP P R +F V +G+ + +A GTS N E + ++ + + G V
Sbjct: 1221 RPIIKGFLWPNPKCRLVFIDVSLGKPGSKFENAYGTSKFNLYEIEPLIAVLKSIVNEGCV 1280
Query: 709 P-SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE----IEVASVDSFQGREKDYIILSC 763
+IG++T Y+ Q+ + A+++ E IE+ S+D FQG+EKD I+ S
Sbjct: 1281 SVDEIGILTAYDAQK------IKLKKAVQETFPYEAAHRIEIDSIDGFQGKEKDLILFSA 1334
Query: 764 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 805
VRSN + +GFL D RRLNV LTRA+ G++I G+ L+ P
Sbjct: 1335 VRSNANNELGFLRDARRLNVMLTRAKRGVIIFGDQFTLANDP 1376
>gi|50303681|ref|XP_451783.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640915|emb|CAH02176.1| KLLA0B05555p [Kluyveromyces lactis]
Length = 1997
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 286/616 (46%), Gaps = 118/616 (19%)
Query: 314 ELRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLG 367
E++ S+G +D+ +H FS +S M T + TS+ G Y+ LL
Sbjct: 1241 EIKNSKGENMDLTFRIHRSHKFSNLLTLRSEIHALKVMQMTTVEREYTSLKGLPYYDLLK 1300
Query: 368 HEVEVQ-----MVRNTLPRRFGAPGLPELNASQVFAVKS-VLQRPISLIQGPPGTGKTVT 421
++ Q + +T R A LN SQ A+ S V + SLIQGPPGTGKT T
Sbjct: 1301 QILKAQPSVPENISSTEVNRIKANF--HLNTSQATAILSTVTTQGFSLIQGPPGTGKTKT 1358
Query: 422 SAAIV-YHMAKQGQG-------------------------QVLVCAPSNVAVDQLAEKIS 455
+IV Y ++K +VL+CAPSN AVD+L ++
Sbjct: 1359 ILSIVGYFISKANTNSKNTVTHTIITPTNTTSTEQLLERQKVLICAPSNAAVDELVLRLR 1418
Query: 456 ATGL---------KVVRLCAKSREAVSSPVEHLTLHYQV-------------------RH 487
L ++VR+ +AV+ V+ LTL +V +
Sbjct: 1419 EGVLDYSGNTFRPEIVRIGRS--DAVNESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKF 1476
Query: 488 LDTSEKS----------------------------ELHKLQQLKDEQG----ELSSSDEK 515
D +K E+ L++L E G E+ S+
Sbjct: 1477 QDALQKRKMLQAKLNKEDGNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEIRESNSL 1536
Query: 516 KYKAL---KRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLI 570
KY+ +R + I +D+IC T G+ LA+ +F ++IDE+ Q TE +I
Sbjct: 1537 KYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSII 1596
Query: 571 PLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSL 630
PL G K+ ++VGD QL P ++ A+ QSLF R+ P L VQYRMHP++
Sbjct: 1597 PLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAI 1655
Query: 631 SEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV-PNRPMFFYVQMGQEEISASGTSYLNR 689
S+FPS FY+G LQ+G ++ E + +P P + FF + G+++ + SY N
Sbjct: 1656 SKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYK--FFDIVTGKQKQNTKTMSYTNP 1713
Query: 690 TEAAN----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV 745
E VE ++ T+ ++IG+I+PY Q + N R Q+ I+
Sbjct: 1714 EETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRR--YFGDQIRSYIDF 1771
Query: 746 ASVDSFQGREKDYIILSCVRSNEHQ-GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ 804
++D FQG+EKD II+SCVR++++ +GFL D RR+NVALTRA+ + ILG+ K L
Sbjct: 1772 NTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNN 1831
Query: 805 PLWNGLLTHYKEHECL 820
LW L++ KE CL
Sbjct: 1832 KLWKHLISDAKERNCL 1847
>gi|293373939|ref|ZP_06620281.1| putative DNA helicase [Bacteroides ovatus SD CMC 3f]
gi|292631160|gb|EFF49796.1| putative DNA helicase [Bacteroides ovatus SD CMC 3f]
Length = 649
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 241/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 200 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 253
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 309
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL + + E G E + + RATE EI +AD VI T
Sbjct: 310 ELWGIHKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 369
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +A+R
Sbjct: 370 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEASR 428
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 429 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRGILDFD 488
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ E+ +N+ EA + + + T++ + ++ +I
Sbjct: 489 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELETYIERIGKKRILDERI 542
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 543 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 601
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 602 QIGFLNDLRRMNVAITRARMKLVILGDASTLAKHPFYKRLMLFIKKED 649
>gi|326507228|dbj|BAJ95691.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 980
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 295/610 (48%), Gaps = 95/610 (15%)
Query: 277 LVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQE--EVALELRASQGVPVDINHGFSVDFV 334
L PGD + +R + V I ++ + + L++ G P FS F
Sbjct: 369 LSPGDMVCVRTCNNQGEVGTSCVQGFIHNLGEDGCSITVSLKSRPGDPT-----FS-KFS 422
Query: 335 WKSTSFDRMQGA---------------MKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTL 379
KS DR+Q ++ + +T+ S + L G + ++ M+
Sbjct: 423 GKSVRIDRIQALADGLTYERNCEALILLQRKGLQKTNASIGVVATLFGDKEDMTMLEQNN 482
Query: 380 PRRFGAPGLPE----------LNASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAIVY 427
+G + + +ASQ A+ L +RP+ +IQGPPGTGKT + ++
Sbjct: 483 LTDWGESAIQDAGLLRKHKYDFDASQSQAISLGLNKKRPVLVIQGPPGTGKTGLLSYLID 542
Query: 428 HMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR-----------EAVSSPV 476
+QG+ +VLV APSN AVD + EK+S TGL +VR+ +R E V +
Sbjct: 543 CAVQQGE-RVLVTAPSNAAVDNMVEKLSGTGLNIVRVGNPARISPSVSSRSLGELVKRRL 601
Query: 477 EHLTLHYQVRHLDTSEKSELHK-LQQ-LKDEQGELSSSDEKKYKAL-----KRATE--RE 527
E T +Q +KS L K L+Q L+D+ L+S + K L K+ E +E
Sbjct: 602 EKFTQEFQ------RKKSNLRKDLKQCLQDDS--LASGIRQLLKKLGKNFRKKENEIIKE 653
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQ-VLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
+ +ADV+ T +GA DP + F V+IDE+ QA EP C IP++ G K+ +L GD
Sbjct: 654 VLSNADVVLSTNIGAADPLIKEIGFFDLVIIDEAGQAIEPSCWIPILRG-KRCILAGDQH 712
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
QL PVI+ ++A + GL SL ER L L +L +QYRMH S++ + SN Y G L+
Sbjct: 713 QLAPVILSREAMQGGLGMSLLERASSLHDELLTTKLTMQYRMHESIANWASNEMYFGLLK 772
Query: 645 NGVTINERQSSGIDFP-----WPVPNRPMFFYVQM--------GQEEISASGT-SYLNRT 690
+ ++ R +D+P W + +M +E + +GT S+ N
Sbjct: 773 SSPSVASRLL--VDYPSIQETWITRCALLLLDTRMPYGSLNIDCEENLDLAGTGSFYNSG 830
Query: 691 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE---IEVAS 747
EA V + V + GV P+ I V +PY Q + + R + Y E +EV++
Sbjct: 831 EADIVAQHVVNLVLCGVSPTSIAVQSPYIAQVQLLRD--------RLEEYPEALGVEVST 882
Query: 748 VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 807
+DSFQGRE D +++S VRSN +GFL D RR+NVA+TRAR + ++ + +
Sbjct: 883 IDSFQGREADAVVISMVRSNSLGAVGFLGDNRRMNVAITRARRHVALVCDSFTICNNEFL 942
Query: 808 NGLLTHYKEH 817
LL H ++H
Sbjct: 943 ARLLRHIRQH 952
>gi|383112071|ref|ZP_09932871.1| hypothetical protein BSGG_3732 [Bacteroides sp. D2]
gi|382949144|gb|EFS33032.2| hypothetical protein BSGG_3732 [Bacteroides sp. D2]
Length = 645
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 238/468 (50%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 196 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 249
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 250 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 305
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + RATE EI +AD VI T
Sbjct: 306 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSHLRDRATELEIQINADLFDSARVIASTL 365
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 366 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEAAR 424
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 425 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRGILDFD 484
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI 712
P W + M F+ E+ +N+ EA +E + + ++ +I
Sbjct: 485 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELEAYIERIGKERILDERI 538
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 539 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 597
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKED 645
>gi|268324732|emb|CBH38320.1| putative ATP-dependent helicase [uncultured archaeon]
Length = 658
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 260/552 (47%), Gaps = 91/552 (16%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
+D +F RM A+K F + + LLG NT P +
Sbjct: 126 LRIDLFVNDITFQRMIEALKQF----KRLPRWRKDKLLG---------NTAPAFTQVDKI 172
Query: 389 P----ELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 443
+LN SQ AV +S+ R LI GPPGTGKT+T ++ + K+G ++L A S
Sbjct: 173 EFFNSKLNKSQQEAVIRSLAARDFFLIHGPPGTGKTITCVEVIAQLIKRG-NKILTAADS 231
Query: 444 NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS--------- 494
NVAVD L E++ G+ VVR+ +R + + +L Y V+ K+
Sbjct: 232 NVAVDNLVERLDRIGVNVVRIGHPAR--IIPALRRRSLDYLVQDEPDYRKAQEFRKRAYE 289
Query: 495 -----------ELHKLQQLKDEQGELSSSD--------------EKKYKALKRATER--- 526
E+ + L DE+ L +S+ KK+ LK +R
Sbjct: 290 LKEDMKRYIMPEMRWRRGLSDEEIMLLASEGATTRGIPLKKIEGMKKWLDLKHELDRLFG 349
Query: 527 -----------EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLG 575
I ++A VIC T AG L +F +IDE+TQ+TEP LI VL
Sbjct: 350 DARELEERAIRRIIKAAAVICTTNSTAGSEILKGEKFDFAVIDEATQSTEPSALIA-VLK 408
Query: 576 AKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEF 633
AK+ ++ GDH QL P ++ ++AA +SLFERL+ L IR L VQYRM+ ++EF
Sbjct: 409 AKRFIMAGDHKQLPPTVLNEEAACRSFTKSLFERLLALHGDKIRVMLDVQYRMNEEIAEF 468
Query: 634 PSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM----FFYVQMG-----QEEISASGT 684
P+ FY+G L+ + R I P V F ++ G +E + T
Sbjct: 469 PNWEFYDGKLKADEQVKRRTLMDI-LPESVDEESEDVKPFLFIDTGGNAELEERVRKGST 527
Query: 685 SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIE 744
S N EA V+ + L G+ P I VI+PY+ Q +I + G +E
Sbjct: 528 SRENPGEARLVKDVAERLLNRGIRPEDIAVISPYDDQVVHIKRMLHVEG---------LE 578
Query: 745 VASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ 804
+ +VD FQGREK+ +I+S VRSN+ + IGFL D RRLNV++TRA+ +V++G+ L +
Sbjct: 579 IKTVDGFQGREKEVVIVSFVRSNKSRTIGFLKDLRRLNVSITRAKRKLVLIGDSNTLESE 638
Query: 805 PLWNGLLTHYKE 816
+ L+ KE
Sbjct: 639 GCYRRLVALAKE 650
>gi|414884936|tpg|DAA60950.1| TPA: hypothetical protein ZEAMMB73_755312 [Zea mays]
Length = 737
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 243/462 (52%), Gaps = 54/462 (11%)
Query: 394 SQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEK 453
S+ A+ +RP+ +IQGPPGTGKT + +V + ++G+ +VLV APSN AVD +AE
Sbjct: 268 SRALALALDKERPVLVIQGPPGTGKTRLLSYLVARVVRRGE-RVLVTAPSNAAVDNMAES 326
Query: 454 ISATGLK-VVRLCAKSR-----------EAVSSPVEHLTLHYQVRHLDTSEKSELHK-LQ 500
+SA+GLK +VR+ SR + V++ +E LT ++ R +S L K L+
Sbjct: 327 LSASGLKNIVRVGNPSRISPSVAPMSLGQIVATRLEKLTREFETR------RSALRKDLK 380
Query: 501 QLKDEQGELSSSDE------KKYKALKRATEREISQSADVICCTCVGAGDP--RLANFRF 552
+ + G+ SS + K Y+ K+ RE+ +A+V+ T GA DP R F
Sbjct: 381 RRVQDGGDGSSVRQQLKRLGKDYRKEKKEAVREVLANAEVVLSTNTGAADPLVRGTGGCF 440
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 612
V+IDE+ QA EP C IP++ G K+ +L GDH QL PV++ ++A GL SL ER
Sbjct: 441 DLVIIDEAGQAIEPSCWIPMLQG-KRCILAGDHRQLAPVVLSREAMEGGLGMSLLERASS 499
Query: 613 L--GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER---QSSGIDFPWPVPNRP 667
L GL L QYRMH S++ + S Y+G L++ ++ R + W
Sbjct: 500 LHDGLLATTLTTQYRMHESIASWASKEMYDGLLRSFPSVASRLLVNYPSVKVTWMTQCAL 559
Query: 668 MFFYVQMG--------QEEISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
+ + +E + +GT S+ N EA V V ++ GV P+ I V +PY
Sbjct: 560 LLLDTRRAYGSLNIDCEESLDPAGTGSFYNNGEADIVAHHVLNLVQCGVPPTSIVVQSPY 619
Query: 719 EGQRAYIVNYMSRNGALRQQLYK---EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
Q + + R Q Y ++EV+++DSFQGRE D +++S VRSN +GFL
Sbjct: 620 IAQVQLLQD--------RLQEYPMAFDVEVSTIDSFQGREADAVVISMVRSNSMGEVGFL 671
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
D RR+NVA+TRA+ + ++ + + LL H ++H
Sbjct: 672 ADRRRMNVAITRAKSHVAVVCDTSTICNNAFLARLLLHIRQH 713
>gi|115478052|ref|NP_001062621.1| Os09g0130800 [Oryza sativa Japonica Group]
gi|113630854|dbj|BAF24535.1| Os09g0130800 [Oryza sativa Japonica Group]
gi|215694894|dbj|BAG90085.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641090|gb|EEE69222.1| hypothetical protein OsJ_28445 [Oryza sativa Japonica Group]
Length = 981
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 244/464 (52%), Gaps = 50/464 (10%)
Query: 390 ELNASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
+ +ASQ+ A+ L +RP+ +IQGPPGTGKT + ++ ++G+ +VLV APSN AV
Sbjct: 504 DFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGE-RVLVTAPSNAAV 562
Query: 448 DQLAEKISATGLKVVRLCAKSR-----------EAVSSPVEHLTLHYQVRHLDTSEKSEL 496
D + EK+S TGL VR+ +R E V+ ++ T ++ + D K
Sbjct: 563 DNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDL-RKDLK 621
Query: 497 HKLQQLKDEQG--ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FR 553
H +Q G +L K +K ++ RE+ +ADV+ T +GA DP + F
Sbjct: 622 HCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFD 681
Query: 554 QVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
V+IDE+ QA EP C IP++ G K+ +L GD QL PV++ ++A + GLA SL ER L
Sbjct: 682 LVIIDEAGQAIEPSCWIPILQG-KRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSL 740
Query: 614 --GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP-----WPVPNR 666
L +L QYRMH S++ + SN Y+G L++ ++ + D+P W
Sbjct: 741 HNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLA--DYPFIKETWITRCA 798
Query: 667 PMFFYVQM--------GQEEISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
+ +M +E + +GT S+ N EA V + V ++ GV P+ I V +P
Sbjct: 799 FLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIAVQSP 858
Query: 718 YEGQ----RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
Y Q R + +Y +G +EV+++DSFQGRE D +++S VRSN +G
Sbjct: 859 YIAQVQLLRDRLEDYPEASG---------VEVSTIDSFQGREADAVVISMVRSNTLGAVG 909
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
FL D RR+NVA+TRAR + ++ + + LL H ++H
Sbjct: 910 FLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQH 953
>gi|383123539|ref|ZP_09944218.1| putative DNA helicase [Bacteroides sp. 1_1_6]
gi|251839647|gb|EES67730.1| putative DNA helicase [Bacteroides sp. 1_1_6]
Length = 648
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 239/467 (51%), Gaps = 43/467 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 196 RELYPVRF-----PWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHR-E 249
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 250 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFENHPSYP 305
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 306 ELWGIRKSIREMGSRMRRGSYSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTL 365
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +AAR
Sbjct: 366 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEAAR 424
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ FPS FY G L+ + R D
Sbjct: 425 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMRFPSEWFYNGELEAAPEVRNRGILDFD 484
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI 712
P W + M F+ EE +N+ EA +E ++ ++ ++ I
Sbjct: 485 TPMNW-IDTSEMDFH-----EEFVGESFGRINKQEANLLLQELEAYISRIGKARILDESI 538
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + R + + I V +VD FQG+E+D + +S VR+NE
Sbjct: 539 DFGLISPYKAQVQYLRSKI-RGSSFLRPFRSLITVNTVDGFQGQERDVVFISLVRANEDG 597
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
IGFLND RR+NVA+TRAR +VILG+ L+K + L+ + ++
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDATTLTKHAFYRKLIQYIRQE 644
>gi|431799922|ref|YP_007226826.1| type III restriction enzyme, res subunit [Echinicola vietnamensis
DSM 17526]
gi|430790687|gb|AGA80816.1| Type III restriction enzyme, res subunit [Echinicola vietnamensis
DSM 17526]
Length = 643
Score = 226 bits (576), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 255/521 (48%), Gaps = 59/521 (11%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
VD + S+ M+ A++ G + + LLG E + VR LP+ AP
Sbjct: 126 LGVDLHFDEASYREMEYAVQQVIKAGEGRLGQLRNVLLGQE-KASFVRG-LPKSVEAP-- 181
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
LN SQV AV+ VL + ++L+ GPPGTGKT T + + + QVLVCAPSN AV
Sbjct: 182 -HLNHSQVEAVEMVLAAQEVALVHGPPGTGKTTTMVQAIEETLRSHR-QVLVCAPSNAAV 239
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQG 507
D L EK+ A GL +R+ +R V + TL ++ S +L KL++ +E
Sbjct: 240 DLLVEKLLAIGLSTLRIGHPAR--VDDELLEQTLDAKIAQ--HSSFRDLKKLRKAAEEYR 295
Query: 508 ELSSSDEKKYKALKRATER----------------------EISQSADVICCTCVGAGDP 545
+L ++ + A +R + ++ Q VI T VGA P
Sbjct: 296 KLGRKYKRNFGAAERQQRKQLFAEASKVKEAARHLEDYILYDVFQQNQVIATTLVGANHP 355
Query: 546 RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQS 605
L F V IDE+ Q EP IP VL A+++V+ GDHCQL P I +AA+ GL+++
Sbjct: 356 VLKGMAFPVVFIDEAAQGLEPATWIP-VLKAQKIVMAGDHCQLPPTIKSYEAAKDGLSET 414
Query: 606 LFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP 664
LFE+++ + R L+VQYRM + F S FY G L+ +E G D
Sbjct: 415 LFEKVIQRQPEASRMLRVQYRMPELIMRFSSEYFYHGQLEAAALTDE-HFLGHD------ 467
Query: 665 NRPMFFYVQMGQ---EEISASGTSYLNRTEA--------ANVEKI-VTTFLRSGVVPSQI 712
R M + G E + S LN EA VEKI V+TF I
Sbjct: 468 ERVMAYIDTAGSGFGEHLEKDSLSKLNTDEARFGLGMLEKLVEKIGVSTFKEKAFT---I 524
Query: 713 GVITPYEGQRAYIVNYMSRNGALR--QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
GVI+PY+ Q + M +QL + + ++D FQG+E+D +++S VRSN+
Sbjct: 525 GVISPYKAQVKKLAELMEEGSEYENLRQLSDHVTIGTIDGFQGQERDVVLISMVRSNDEG 584
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
IGFL D RR+NVALTRA+ ++++G+ LS P + L
Sbjct: 585 EIGFLADTRRMNVALTRAKRKLMVVGDSGTLSTHPFYQKFL 625
>gi|406836754|ref|ZP_11096348.1| AAA ATPase [Schlesneria paludicola DSM 18645]
Length = 628
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 235/461 (50%), Gaps = 45/461 (9%)
Query: 388 LPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVA 446
L +L+ SQ AV L + +++I GPPGTGKT T ++ ++G+ +VL CA SN+A
Sbjct: 176 LAQLDESQQAAVSHALSAQHLAVIHGPPGTGKTTTVVELIRQAVRRGE-KVLACAASNLA 234
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSELHK-LQQLKD 504
VD L E++ +V+R+ +R V + TL V H D E K L+
Sbjct: 235 VDNLLERLVIARERVIRIGHPAR--VLPELREHTLDVMVESHPDLKLAREWTKEAWSLRR 292
Query: 505 EQGELSSS-----------DEKKYKALKRATERE------ISQSADVICCTCVGAGDPRL 547
+ G+ + + DE K + L+ A E E + SA V+C T G D L
Sbjct: 293 QAGKFTRTAPPPGARRDARDEAK-RLLRDARELESRLVEYLLDSAQVVCATLTGLNDEIL 351
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
+F V+IDE+ Q+TEP C IPL L +K++VL GDHCQL P I+ A R G S+
Sbjct: 352 GERQFDLVVIDEAAQSTEPPCWIPL-LRSKRLVLAGDHCQLPPTIISHDARREGFQVSMM 410
Query: 608 ERLVLL--GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP----W 661
ERLV L RL QYRMH + +F S+ FY+ +L + ++ R D P
Sbjct: 411 ERLVSRWGDLIARRLDTQYRMHDRIMQFSSDEFYDSSLISANSV--RAHRLADLPHVTDG 468
Query: 662 PVPNRPMFFYVQMGQ---EEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
+ + F+ G E+ G S N EA V V L +GV P++I VITPY
Sbjct: 469 ELTQSSIRFFDTAGSDCVEQAEVEGESRTNPGEAEFVVIKVNELLAAGVRPTEIAVITPY 528
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q + ++ G +E+ +VD FQGREK+ +++S VRSN +GFL D
Sbjct: 529 SAQARLLRTLIAEAG---------VEIDTVDGFQGREKEAVVISLVRSNAKGELGFLTDT 579
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHEC 819
RR+NVALTRAR +++ G+ L+ + +L +++ +
Sbjct: 580 RRMNVALTRARRHLMVFGDSATLANHEFYLRMLNYFERQDA 620
>gi|393235485|gb|EJD43040.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 887
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 241/494 (48%), Gaps = 49/494 (9%)
Query: 365 LLGHEVEVQMVRNTLPRRFGAPGLPEL--NASQVFAVKSVLQRPISLIQGPPGTGKTVTS 422
+L ++ R + P PG PEL N++QV A+ +L +SL+QGPPGTGKT T
Sbjct: 390 MLDQRIQSWARRYSRPDPIVLPGDPELPLNSTQVRAIALMLASRVSLVQGPPGTGKTKTI 449
Query: 423 AAIVYHMAKQGQGQ--VLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLT 480
+ + + +LVC +N+AVD L E + GL+ +R + L
Sbjct: 450 VETIRLLKRHFHVPYPILVCTYTNIAVDNLVEGLGKAGLRPLRFGSSGTAPAGGAQYTLR 509
Query: 481 LHYQVRHLDTSEKSELHKLQQLKDEQGELSSSD----------EKKYKALK-------RA 523
L L ++++L + L +++ EK+ L+ R
Sbjct: 510 ARRDAHVLGPHLDKLLGRIERLNRDLRGLRAAEPPNPAAIARREKEVLGLRGAVFKLERL 569
Query: 524 TEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVG 583
+EI + +DV+C TC+ AG L F V +DE++ +TEP LIPL+ G + V L+G
Sbjct: 570 LMQEIVEDSDVVCTTCISAGSAALHVADFPIVFLDEASMSTEPASLIPLMRGCEHVALIG 629
Query: 584 DHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGT 642
DH QL PVI +A R GL +SLFERL G P I L VQYRMHP LS FP++ FY +
Sbjct: 630 DHKQLPPVITSDEAERGGLGRSLFERLTEEGEVPSIMLDVQYRMHPDLSRFPASEFYGRS 689
Query: 643 LQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEI--------SASGTSYLNRTEAAN 694
L +G + + P P ++Q G + + S +N EA
Sbjct: 690 LLDGTVSAHGEVA------PALRPPASRFLQRGAGVVFLDHRHGEARRDRSRVNVGEARL 743
Query: 695 VEKIVTTFL--RSGVVPSQIGVITPYEGQRAYIVNYMSRN-----GAL----RQQLYKEI 743
V +V L +V +IGVI PY Q + + + N AL R + I
Sbjct: 744 VCDVVEDLLLQNEDLVGREIGVIAPYAAQISLLERVLGENRERWVDALGSERRADEVEAI 803
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
EV +VD F+GREK+ II S VR+N IGFL D RRLNV LTRA+ G+ + G+ + L
Sbjct: 804 EVKTVDGFEGREKEVIIFSTVRNNGAGQIGFLADRRRLNVGLTRAKRGLFVAGSVRTLGT 863
Query: 804 QPLWNGLLTHYKEH 817
+ +G+ Y E+
Sbjct: 864 EK--SGVWARYVEY 875
>gi|329957754|ref|ZP_08298229.1| putative DNA helicase [Bacteroides clarus YIT 12056]
gi|328522631|gb|EGF49740.1| putative DNA helicase [Bacteroides clarus YIT 12056]
Length = 632
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 246/466 (52%), Gaps = 45/466 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +++ GPPGTGKT T +Y + +
Sbjct: 180 RELYPVRF-----PWLNSTQETAVNKVLCARDTAIVHGPPGTGKTTTLVEAIYETLHR-E 233
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN+AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 234 PQVLVCAQSNMAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFENHPLYP 289
Query: 495 ELHKL-QQLKDEQGELS--SSDEKK------YKALKRATEREIS------QSADVICCTC 539
EL + ++L+ G+ S DE++ + RAT EI SA VI T
Sbjct: 290 ELWSIRKELRQLGGKARHGSYDEREGIRSRMSRLRDRATTLEIQINAELFDSAHVIASTL 349
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 350 VSSNHRLLNGRRFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAAR 408
Query: 600 AGLAQSLFERLVLLGLKPI---RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
+GL Q+L E++V KP L+VQYRMH + F S+ FY+G L+ I R G
Sbjct: 409 SGLEQTLMEKVV--ANKPSVVSLLKVQYRMHEDIMRFSSDWFYDGALEAAPEIRHR---G 463
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR----SGVVPSQI 712
I W P + +EE +N+ EA + K + +++ S ++ +I
Sbjct: 464 I-LDWDTPITWLDTSEMDFKEEFVGETFGRINKEEAHLLLKELEAYIQRIGGSRILEERI 522
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEH 769
G+I+PY+ Q Y+ + + +LR Y+ I V +VD FQG+E+D I +S VR+NE
Sbjct: 523 DFGLISPYKAQVQYLRGKIKSSASLRP--YRSLITVNTVDGFQGQERDVIFISLVRANEE 580
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
IGFLND RR+NVA+TRAR +VILG LS + LL + +
Sbjct: 581 GQIGFLNDLRRMNVAITRARMKLVILGEATTLSHHTFYKRLLEYVR 626
>gi|265766889|ref|ZP_06094718.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253266|gb|EEZ24742.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 634
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 244/470 (51%), Gaps = 53/470 (11%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R T P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RATYPVRF-----PWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ SR V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPSR--VNDKM--LSFTYERRFEGHPAYT 291
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E ++ + +RATE EI + D VI T
Sbjct: 292 ELWGIRKSIREMGNRMRKSSYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C + A +V+ GDHCQL P I C +AA+
Sbjct: 352 VSSNHRILTGRRFTTLFIDEAAQALEAACWTA-IRRADRVIFAGDHCQLPPTIKCIEAAQ 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL Q+L E++ + + L +VQYRMH S+ +F S FY+G LQ + R +D
Sbjct: 411 NGLEQTLMEKVAANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLD 470
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS----GVVPSQI 712
P W + M F+ EE +N+ EA + + + ++R V+ +I
Sbjct: 471 LPMSW-IDTSEMEFH-----EEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERI 524
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLY-----KEIEVASVDSFQGREKDYIILSCVR 765
G+I+PY+ Q Y+ G L+ L+ +I + +VD FQG+E+D I +S VR
Sbjct: 525 DFGLISPYKAQVQYL------RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVR 578
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+NE IGFLND RR+NVA+TRAR +VILG+ +SK + L+ + +
Sbjct: 579 ANEDGQIGFLNDLRRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|218201695|gb|EEC84122.1| hypothetical protein OsI_30457 [Oryza sativa Indica Group]
Length = 981
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 244/464 (52%), Gaps = 50/464 (10%)
Query: 390 ELNASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
+ +ASQ+ A+ L +RP+ +IQGPPGTGKT + ++ ++G+ +VLV APSN AV
Sbjct: 504 DFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGE-RVLVTAPSNAAV 562
Query: 448 DQLAEKISATGLKVVRLCAKSR-----------EAVSSPVEHLTLHYQVRHLDTSEKSEL 496
D + EK+S TGL VR+ +R E V+ ++ T ++ + D K
Sbjct: 563 DNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDL-RKDLK 621
Query: 497 HKLQQLKDEQG--ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FR 553
H +Q G +L K +K ++ RE+ +ADV+ T +GA DP + F
Sbjct: 622 HCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFD 681
Query: 554 QVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
V+IDE+ QA EP C IP++ G K+ +L GD QL PV++ ++A + GLA SL ER L
Sbjct: 682 LVIIDEAGQAIEPSCWIPILQG-KRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSL 740
Query: 614 --GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP-----WPVPNR 666
L +L QYRMH S++ + SN Y+G L++ ++ + D+P W
Sbjct: 741 HNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVVSHLLA--DYPFIKETWITRCA 798
Query: 667 PMFFYVQM--------GQEEISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
+ +M +E + +GT S+ N EA V + V ++ GV P+ I V +P
Sbjct: 799 FLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIAVQSP 858
Query: 718 YEGQ----RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
Y Q R + +Y +G +EV+++DSFQGRE D +++S VRSN +G
Sbjct: 859 YIAQVQLLRDRLEDYPEASG---------VEVSTIDSFQGREADAVVISMVRSNTLGAVG 909
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
FL D RR+NVA+TRAR + ++ + + LL H ++H
Sbjct: 910 FLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQH 953
>gi|390350102|ref|XP_788705.3| PREDICTED: uncharacterized protein LOC583716 [Strongylocentrotus
purpuratus]
Length = 3661
Score = 225 bits (574), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 168/485 (34%), Positives = 241/485 (49%), Gaps = 63/485 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQG--------QVLVCAP 442
LN SQ AVK L+ S+IQGPPGTGKTVT A + Y + Q QVL C P
Sbjct: 3179 LNGSQQAAVKKALKDTFSVIQGPPGTGKTVTGAYLAYFFTRLNQQLRAGKMPPQVLYCGP 3238
Query: 443 SNVAVDQLAEKISA-TGLKVVRLCAKSREAVSSPV---------------------EHLT 480
SN +VD +A + + +VR+ ++ E P+ +
Sbjct: 3239 SNKSVDVVAAYLKKFQNISIVRVYSEQIERKEYPIPGVPGLISKWSRKEASMSEGLSDIA 3298
Query: 481 LHYQVRHLDTSEKSELHKLQQ-LKDEQGELSSSDEKKYKA-LKRATEREISQSADVICCT 538
LH +R EL ++ + + S D K YK+ + AT++E+ ++ ++ CT
Sbjct: 3299 LHRLIRMRGKPHAEELAAYERRFRTNPAGILSRDIKDYKSTIFEATKQEL-KNHHIVLCT 3357
Query: 539 CVGAGDPRLANF-RFRQVLIDESTQATEPECLIPLV-LGAKQVVLVGDHCQLGPVIMCKK 596
C AG R++ F R QV++DE+ +EPE LIPLV + KQVVLVGDH QL +I
Sbjct: 3358 CNAAGAGRISRFTRIIQVIVDEAGMCSEPETLIPLVSVKPKQVVLVGDHQQLRSIITEPN 3417
Query: 597 AARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A + G+ SL E+ K L +QYRMH + EFPS +FY+ L+ ++ R
Sbjct: 3418 ARQLGIDISLLEKY---KDKAEMLTIQYRMHKQICEFPSLAFYDDRLRTAESVMRRGPDP 3474
Query: 657 IDFPWPVPNR-PMFFYVQMGQEEI----SASGT--SYLNRTEAANVEKIVTTFLRSGVVP 709
I WP + P F GQEE S G S N E +V +IV + GV P
Sbjct: 3475 IRSIWPNNGQTPRVFCHVSGQEETLSVKSEEGNEQSKSNSAEIRHVIRIVREMISRGVSP 3534
Query: 710 SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN-- 767
+I V++ Y Q A I + + LRQ I+V++V QG E DY++LS VRS
Sbjct: 3535 EKIIVLSQYRLQCAQIEERLQTDRNLRQ-----IKVSTVVKSQGSEWDYVVLSTVRSKPR 3589
Query: 768 -----------EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
+ + +GF+ND ++NVALTRA+ G++I+GN +L W +L Y+E
Sbjct: 3590 IEIEEKPSKGWQRKHLGFINDENQMNVALTRAKQGLIIIGNQYLLRCHNRWREMLKMYEE 3649
Query: 817 HECLV 821
CLV
Sbjct: 3650 THCLV 3654
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 126/538 (23%), Positives = 200/538 (37%), Gaps = 111/538 (20%)
Query: 408 SLIQGPPGTGKTVTSA-AIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
++I GP GTGKT T A AI + ++ + L+C SN A D + + C
Sbjct: 1407 TMILGPFGTGKTHTLAKAIQRTLTERKDAKFLICTHSNSAADLYIRDY------LHKFCE 1460
Query: 467 KSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRA--- 523
S + + VR T + KL ++D K+Y + A
Sbjct: 1461 DSPDT-----------WMVRVYAT-----MRKLSMIRDPV--------KQYMLIDAAGPR 1496
Query: 524 --TEREISQSAD------VICCTCVGAGDPRLANFR--FRQVLIDESTQATEPECLIPLV 573
TE E V+ + A R F ++IDE+ QA E E +IPL
Sbjct: 1497 LPTEEECQDWVSRKGPSIVVVTLSTAVHLTKTATLRGYFSHIVIDEAGQALETEAIIPLA 1556
Query: 574 LGAKQ--VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLK-----PIRLQVQYRM 626
L + VVL GD Q+ P + + A SL +RL + L + YR
Sbjct: 1557 LATEDTSVVLAGDPKQMSPKVHSPRTMEAKFNMSLLQRLFKYDKQNDCHASCNLTINYRS 1616
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR-PMFFYVQMGQEEISASGTS 685
+ +F + G + +S PN P+ F G++++ GTS
Sbjct: 1617 CQPILDFLKVHY-------GTAFISKSTSS-----EHPNLFPLNFVDVRGEDQL--VGTS 1662
Query: 686 YLNRTEAANVEKIVTTFLR------SGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 739
Y+N EA + + V + ++ S + V++PY Q I M RN L
Sbjct: 1663 YMNAEEARIIAEYVASLMKHWPEEWDRPKQSDVVVLSPYRVQVQVIRQEM-RNRGLHA-- 1719
Query: 740 YKEIEVASVDSFQGREKDYIILSCVRSNEHQG--------------------IGFLNDPR 779
+ V +V + QG++ + LS VR+ GFL+D
Sbjct: 1720 ---VTVETVQNVQGKQYRAVFLSTVRTRSSLNKVDITSLPQVGDRNVRNKFWYGFLSDKA 1776
Query: 780 RLNVALTRARYGIVILGNPKVLSK----QPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
LN A TRA+ I ++G+P + Q W + C G +++ K+ +
Sbjct: 1777 LLNTAFTRAQSLITVMGDPVAVCSAGECQKTWQRYI-----RTCERNGAIHS-KEGLTMA 1830
Query: 836 QKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHP 893
+I N +RL + +P S P+ RG+ P P +P
Sbjct: 1831 SIQNEIANAKRLLNPSANSFIPR---ASAPSTACRGTPRTVTARPAVSRAIEVPSCYP 1885
>gi|448105212|ref|XP_004200439.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|448108344|ref|XP_004201070.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359381861|emb|CCE80698.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359382626|emb|CCE79933.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
Length = 1934
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 263/527 (49%), Gaps = 111/527 (21%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-YHMAK------------QG--- 433
+N SQ A+ ++ SLIQGPPGTGKT T IV Y +AK QG
Sbjct: 1293 VNRSQASAILGTYKQDGFSLIQGPPGTGKTKTILGIVGYALAKSQNNSISVPTNTQGSNK 1352
Query: 434 ---QGQVLVCAPSNVAVDQLAEKI-----SATG----LKVVRLCAKSREAVSSPVEHLTL 481
++L+CAPSN AVD+L ++ S++G L VVRL +A++S V LTL
Sbjct: 1353 QVNNSKLLICAPSNAAVDELVLRLRQGVKSSSGESMNLSVVRLGRS--DAINSSVRDLTL 1410
Query: 482 HYQV-RHLDT-------------------SEKSELHKLQQ---LKDEQ-----GELSSSD 513
V + L + SE++ L +L Q L +E+ EL + +
Sbjct: 1411 EELVDKQLQSQATNTMSDPTIRTEHTKCVSERNRLRELLQQPNLTEEEVTKYEDELRAVN 1470
Query: 514 EKKYKALKRATE-----------REISQ---------SADVICCTCVGAGDPRLA--NFR 551
K+ + KR E REI + A+VIC T G+ LA N
Sbjct: 1471 RKRNELAKRLDEQRERVSIAFRTREIERRQLQSKILSEANVICSTLSGSAHDFLASMNMV 1530
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL- 610
F QV+IDE+ Q E LIPL G K+ ++VGD QL P ++ + A+ QSLF R+
Sbjct: 1531 FDQVIIDEACQCVELSALIPLRYGCKKCIMVGDPNQLPPTVLSQVASSFNYEQSLFVRMQ 1590
Query: 611 ------VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQSSGIDFPW 661
V L L +QYRMHP +S FPS FY L +G +N+R+ DFP
Sbjct: 1591 KKYPSHVYL------LDIQYRMHPDISRFPSAEFYNSRLHDGEGMKELNQREWHS-DFPL 1643
Query: 662 PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS-----QIGVIT 716
P F+ G+ + S S N +EA ++V T ++ ++P +IG+I+
Sbjct: 1644 S----PYRFFNITGKHKQSEYTRSLYNYSEAQVALEMVKTLMK--ILPQNEFSGRIGIIS 1697
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PY+ Q + + +N Q + EI+ +VD FQG+EK+ II+SCVR+++ +GFL+
Sbjct: 1698 PYKEQIRVLKDVFRKNYG--QTILNEIDFNTVDGFQGQEKEIIIMSCVRASDSGNVGFLS 1755
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG 823
D RR+NVALTRAR + ILGN + LS+ WN LL KE + + +
Sbjct: 1756 DVRRMNVALTRARTTLWILGNKESLSRNKTWNHLLEDAKERDAVTDA 1802
>gi|222623514|gb|EEE57646.1| hypothetical protein OsJ_08074 [Oryza sativa Japonica Group]
Length = 980
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 278/597 (46%), Gaps = 71/597 (11%)
Query: 277 LVPGDELRLRYS---GDAAHPAWQSVGHVIKLTAQE-EVALELRASQGVPVDINHGFSVD 332
L PGD + +R G+ A Q G V L + L L + G P FS
Sbjct: 371 LSPGDMVCVRTCNSRGEGATSCMQ--GFVYNLGEDGCSITLALESRHGDPT-----FSRL 423
Query: 333 FVWKSTSFDRMQGAMKTF---------------AVDETSVSGYIYHHLLGHEVEVQMVRN 377
F KS DR+QG + +++ S + L G +V +
Sbjct: 424 F-GKSVRIDRIQGLADALTYERNLEALIILQRNGLQKSNASIGVVATLFGDNKDVMKMEQ 482
Query: 378 TLPRRFGAPGLPE--------LNASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAIVY 427
+G P+ L+ASQ+ A+ L +RP+ +IQGPPGTGKTV ++
Sbjct: 483 NHLTDWGESSAPDPRISERYALDASQLKALSLGLNKKRPVLIIQGPPGTGKTVLLTELIV 542
Query: 428 HMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLT-----LH 482
+QG+ VLV APSN AVD + E++S TGL +VR+ +R + S + L
Sbjct: 543 RAVQQGE-NVLVTAPSNAAVDNMVERLSNTGLNIVRVGNPARISPSVASKSLAEIVNGRL 601
Query: 483 YQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATE-------REISQSADVI 535
Q R ++S+L K E L++ + K L R E RE A V+
Sbjct: 602 EQFRKELERKRSDLRKDLSYCIEDDSLAAGIRQLLKQLGRDLEKKEKEMIREALSEAQVV 661
Query: 536 CCTCVGAGDPRLA-NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
T GA DP + F V+IDE+ QA EP C IP++ G K+ +L GDHCQL PVI+
Sbjct: 662 LSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQG-KRCILAGDHCQLAPVILS 720
Query: 595 KKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
+KA GL +SL ER L GL RL VQ+RM+ S++ + S Y G L++ ++ +
Sbjct: 721 RKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQ 780
Query: 653 ---QSSGIDFPWPVPNRPMFFYVQM--------GQEEISASGT-SYLNRTEAANVEKIVT 700
S + W + +M E+I SGT S+ N EA V + V
Sbjct: 781 TLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDGEADIVTQHVL 840
Query: 701 TFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYII 760
+ GV P+ I V +PY Q + + L +EV+++DSFQGRE D ++
Sbjct: 841 NLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGL-----SGVEVSTIDSFQGREADAVV 895
Query: 761 LSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+S VRSN +GFL D RR+NVA+TRA + ++ + + LL H + +
Sbjct: 896 ISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHIRRY 952
>gi|406605000|emb|CCH43533.1| hypothetical protein BN7_3085 [Wickerhamomyces ciferrii]
Length = 2034
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 260/516 (50%), Gaps = 99/516 (19%)
Query: 390 ELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHM------------------- 429
++N SQ A+ S ++ + L+QGPPGTGKT T I+ HM
Sbjct: 1271 KVNRSQANAIASSIKAQGFFLVQGPPGTGKTKTILGIISHMLSNYRANSNVIQTPSVIPG 1330
Query: 430 ---AKQGQGQVLVCAPSNVAVDQLAEKI-----SATGL----KVVRLCAKSREAVSSPVE 477
A +VL+CAPSN AVD+L ++ +A G ++VRL +A+++ V+
Sbjct: 1331 KTLADFKNKKVLICAPSNAAVDELVLRLKDGIPNAKGEIYNPQLVRLGRS--DAINTAVK 1388
Query: 478 HLTLH-------------------------YQVRHLDTSEKSEL---------------- 496
+TL +V+H +++ L
Sbjct: 1389 DMTLEELVDAKLGKNTATKSDTIPALLKELSEVKHELEKKRAILAAGNNKNEEKVRGEIR 1448
Query: 497 -HKLQQLK-----DEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLAN- 549
+KL+Q K DE+ E +S + + +R + +I A++IC T GA +AN
Sbjct: 1449 DNKLKQNKIKKQLDEEREAQTSSNRTREVNRRNIQAQILNEAEIICSTLSGAAHDMVANI 1508
Query: 550 -FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
+F V+IDE+ Q TE +IPL G ++ ++VGD QL P ++ AA + QSLF
Sbjct: 1509 GIKFDSVVIDEACQCTELSAIIPLRYGCQRCIMVGDPNQLPPTVLSSVAAESKYDQSLFV 1568
Query: 609 RLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNG----VTINERQSSGIDFPWPVP 664
R+ KP+ L VQYRMH +S+FPS FY+G LQ+G V + FP P
Sbjct: 1569 RMTSHS-KPLLLDVQYRMHSDISKFPSKKFYDGHLQDGPSMDVLTKREWHKNVSFP---P 1624
Query: 665 NRPMFFYVQMGQEEISASGTSYLNRTE-AANVEKIVTTFLRSGVVP--SQIGVITPYEGQ 721
R F+ + G+E ++ SY+N+ E +E I T + + G + ++IGVITPY+ Q
Sbjct: 1625 YR--FYDIAEGKESQNSKTFSYVNKMEIKIAIELIDTLYTKFGRIDYRNKIGVITPYKEQ 1682
Query: 722 RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ-GIGFLNDPRR 780
I R+ Q+ +I ++D FQG+EK+ II+SCVR++ ++ G+GFL D RR
Sbjct: 1683 NRAIQQAFIRHFG--NQIRGDITFNTIDGFQGQEKEIIIMSCVRADSNKSGVGFLKDFRR 1740
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
+NVALTR++ + ILG+ L K LW+ L+T K+
Sbjct: 1741 MNVALTRSKCSLWILGHNNSLVKNDLWSDLITDAKD 1776
>gi|374384247|ref|ZP_09641773.1| putative DNA helicase [Odoribacter laneus YIT 12061]
gi|373228854|gb|EHP51157.1| putative DNA helicase [Odoribacter laneus YIT 12061]
Length = 645
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 237/457 (51%), Gaps = 32/457 (7%)
Query: 381 RRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLV 439
R+ P LN Q AV VL+ + I+++ GPPGTGKT T +Y + + QVLV
Sbjct: 180 RKLPLLRFPWLNDQQEKAVNHVLRAQDIAIVHGPPGTGKTTTLVEAIYETLHK-ENQVLV 238
Query: 440 CAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSEL 496
CA SN+AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R H D E +
Sbjct: 239 CAQSNMAVDWISEKLVDRGIHVLRIGNPTR--VNDKM--LSFTYERRFEAHPDYPELWNI 294
Query: 497 HKLQQLKDEQGELSSSDEKKYKALK----RATEREISQS------ADVICCTCVGAGDPR 546
K + + + E Y L+ RATE EI A VI T VG+ +
Sbjct: 295 RKTIRELSPKLRKRETREAVYSRLQHLRHRATELEIKIEQELFGEARVIASTLVGSANKI 354
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
L RF + IDE+ QA E C I + +V+L GDHCQL P I K+AA+ GLA++L
Sbjct: 355 LEGKRFSTLFIDEAAQALEAACWIA-IRKTDRVILAGDHCQLPPTIKNKEAAQQGLARTL 413
Query: 607 FERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
+++ + L Q+QYRMH + FPS FY LQ + R D P +
Sbjct: 414 MQKVAQRQPPAVSLLQIQYRMHEDIMHFPSRWFYHNCLQAAPEVRFRNILEYDSPIVWCD 473
Query: 666 RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR----SGVVPSQI--GVITPYE 719
+ EE + S+LNRTEA + + + +++ + ++ QI G+I+PY+
Sbjct: 474 TQAY----DSSEETAGESLSHLNRTEALLLLQQLQEYIQKIGETRILDEQIDFGLISPYK 529
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
Q YI M +N + + I + +VD FQG+E+D I +S VR+NE IGFL D R
Sbjct: 530 AQVRYIRQLMRKNPFFKP-FSRLISINTVDGFQGQERDVIFISLVRANEAGNIGFLQDLR 588
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
R+NVA+TRAR +++LG+ L P + L + +E
Sbjct: 589 RMNVAITRARMKLILLGDALTLLHHPFYKALFEYIQE 625
>gi|41053136|dbj|BAD08079.1| putative DNA helicase [Oryza sativa Japonica Group]
Length = 794
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 278/597 (46%), Gaps = 71/597 (11%)
Query: 277 LVPGDELRLRYS---GDAAHPAWQSVGHVIKLTAQE-EVALELRASQGVPVDINHGFSVD 332
L PGD + +R G+ A Q G V L + L L + G P FS
Sbjct: 185 LSPGDMVCVRTCNSRGEGATSCMQ--GFVYNLGEDGCSITLALESRHGDPT-----FSRL 237
Query: 333 FVWKSTSFDRMQGAMKTF---------------AVDETSVSGYIYHHLLGHEVEVQMVRN 377
F KS DR+QG + +++ S + L G +V +
Sbjct: 238 F-GKSVRIDRIQGLADALTYERNLEALIILQRNGLQKSNASIGVVATLFGDNKDVMKMEQ 296
Query: 378 TLPRRFGAPGLPE--------LNASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAIVY 427
+G P+ L+ASQ+ A+ L +RP+ +IQGPPGTGKTV ++
Sbjct: 297 NHLTDWGESSAPDPRISERYALDASQLKALSLGLNKKRPVLIIQGPPGTGKTVLLTELIV 356
Query: 428 HMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLT-----LH 482
+QG+ VLV APSN AVD + E++S TGL +VR+ +R + S + L
Sbjct: 357 RAVQQGE-NVLVTAPSNAAVDNMVERLSNTGLNIVRVGNPARISPSVASKSLAEIVNGRL 415
Query: 483 YQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATE-------REISQSADVI 535
Q R ++S+L K E L++ + K L R E RE A V+
Sbjct: 416 EQFRKELERKRSDLRKDLSYCIEDDSLAAGIRQLLKQLGRDLEKKEKEMIREALSEAQVV 475
Query: 536 CCTCVGAGDPRLA-NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
T GA DP + F V+IDE+ QA EP C IP++ G K+ +L GDHCQL PVI+
Sbjct: 476 LSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQG-KRCILAGDHCQLAPVILS 534
Query: 595 KKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
+KA GL +SL ER L GL RL VQ+RM+ S++ + S Y G L++ ++ +
Sbjct: 535 RKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQ 594
Query: 653 ---QSSGIDFPWPVPNRPMFFYVQM--------GQEEISASGT-SYLNRTEAANVEKIVT 700
S + W + +M E+I SGT S+ N EA V + V
Sbjct: 595 TLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDGEADIVTQHVL 654
Query: 701 TFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYII 760
+ GV P+ I V +PY Q + + L +EV+++DSFQGRE D ++
Sbjct: 655 NLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGL-----SGVEVSTIDSFQGREADAVV 709
Query: 761 LSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+S VRSN +GFL D RR+NVA+TRA + ++ + + LL H + +
Sbjct: 710 ISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHIRRY 766
>gi|388854659|emb|CCF51816.1| related to regulator of nonsense transcripts 1 [Ustilago hordei]
Length = 926
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 246/519 (47%), Gaps = 112/519 (21%)
Query: 388 LPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCAPSNV 445
LPELN SQ AV +L+ +SLIQGPPGTGKT T + + + Q +++ A +NV
Sbjct: 344 LPELNRSQTQAVAMMLRERVSLIQGPPGTGKTRTIVTAIKLLKQDFQVPHPIMLAAHTNV 403
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLH-YQVRH-----LDTSEKSELHKL 499
AVD LA+ GL+VVR+ +R + ++ TL Y +RH LD K L L
Sbjct: 404 AVDNLADGCIKAGLRVVRIGPSAR--ARAGIDQYTLDAYFLRHPAKARLDQI-KRRLDTL 460
Query: 500 QQLKD--EQGELSSSDEKK----------------------------------------- 516
+LK E G +S S K
Sbjct: 461 DRLKSDYEMGRMSGSASSKVANRLYESVGADGEAVAQSWKDVMAGRKEERDATQSQAGAA 520
Query: 517 ---YKALKRATER--------------EISQSADVICCTCVGAGDPRLANFRFRQVLIDE 559
Y+A+K+ R EI ADVIC + + AG P L V DE
Sbjct: 521 SVEYEAVKKQLNRLKATYFFLRASIRGEILNRADVICGSAIAAGSPELDMIDLPVVFFDE 580
Query: 560 STQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG--LKP 617
++ ATEP L+PL+ G + + ++GDH QL PV+ +A + GL++SLFERL+ G +
Sbjct: 581 ASMATEPVSLVPLMKGCRHLSIIGDHKQLPPVVTSVEAKQGGLSRSLFERLIESGQNIPS 640
Query: 618 IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN------------ 665
L VQ+RMHPSL+EFP+ +FY+G LQNG G + PV +
Sbjct: 641 TMLNVQFRMHPSLAEFPNKAFYDGALQNG--------KGTEQIAPVESSYWRTRTAGQKK 692
Query: 666 ----RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG--VVPSQIGVITPYE 719
+ + F G+E + + TS N +EA V +V LR + IG++TPY
Sbjct: 693 SQDAQRLCFIDHQGRESKTDNSTSLYNTSEARIVVDVVVDVLRRNPQLTGDDIGIVTPYA 752
Query: 720 GQRAYIVNYM------------SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
GQ+ + + S GA QL I++ +VD F+GREK I+ S VR+N
Sbjct: 753 GQQILLEKMLQNERSDARKKASSAIGARSSQL-GFIDIHTVDGFEGREKKVILFSTVRTN 811
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+GFL D RRLNVALTRA+ + I+GN K L
Sbjct: 812 ALGYVGFLADGRRLNVALTRAQSAMFIIGNIDTFKKAQL 850
>gi|367015784|ref|XP_003682391.1| hypothetical protein TDEL_0F03690 [Torulaspora delbrueckii]
gi|359750053|emb|CCE93180.1| hypothetical protein TDEL_0F03690 [Torulaspora delbrueckii]
Length = 1082
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 247/485 (50%), Gaps = 71/485 (14%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVDQ 449
N SQ A++ VL ++++QGPPGTGKT T I+ M K ++C A SN+A+D
Sbjct: 611 FNDSQKSAIQHVLNNSVTILQGPPGTGKTSTIEEIILQMIKNFHSFPILCVAASNIAIDN 670
Query: 450 LAEK--ISATGLKVVRLCAKSREAVSS---PVEHLTLHYQV-RHLDTSEKSELHKLQQLK 503
+AEK ++ +K++R+ ++ +EA + P+ + LH V + K + KL+
Sbjct: 671 IAEKFMVNRPDIKILRIVSEGKEAQYNNEHPLGKICLHNIVYDQMPPDMKENIAKLRS-- 728
Query: 504 DEQGELSSSDEKKYKAL----KRATEREISQSADVICCTCVGAGDPRLANFR-FRQVLID 558
G + ++ L ++R + Q A ++ T + AG +L + V++D
Sbjct: 729 ---GRSKDVSKNQFSKLLTQQNNISDRHVLQ-AQILFTTNIAAGGRQLKAIQELPVVIMD 784
Query: 559 ESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL-- 615
ESTQ++E L+PL L G + V VGD QL + L SLFER++L G
Sbjct: 785 ESTQSSEASTLVPLSLPGIRTFVFVGDEKQLSSF-----SNIPQLEMSLFERVLLNGCYK 839
Query: 616 KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY---- 671
KP L QYRMHP +SEFP FY+G L+NGVT E Q S W P+++Y
Sbjct: 840 KPHMLDTQYRMHPQISEFPIKKFYQGELKNGVT--EEQKS-----WESIKYPLYYYHCNE 892
Query: 672 ---VQMGQEEISASGTSYLNRTEAANVEKIVTTF-LRSGVVPSQIGVITPYEGQRAYIVN 727
++ + SG +Y NR E + K++ + GV QIGVITPY QR I
Sbjct: 893 GPESKVFNRQRGMSGFTYNNRHECDAILKVIYKLIMDKGVKNDQIGVITPYSAQRDLISE 952
Query: 728 YMSRNG-------ALRQQLYKE----------------------IEVASVDSFQGREKDY 758
+ + A+ Q+L + + VA++DSFQG EK++
Sbjct: 953 TLVNDDVVNPAKIAMEQELDEADLLDAGIGRSNGKKNTINIINGVYVATIDSFQGHEKEF 1012
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEH 817
+I SCVR+N+ IGF +D +R+NVALTRA+ G+V++GN +V K LW + + +E
Sbjct: 1013 VIFSCVRNNKENRIGFASDKKRMNVALTRAKNGLVLVGNSEVFRKGDSLWKDYIEYLEEK 1072
Query: 818 ECLVE 822
+ +
Sbjct: 1073 SLIFQ 1077
>gi|225851051|ref|YP_002731285.1| DNA helicase [Persephonella marina EX-H1]
gi|225645408|gb|ACO03594.1| putative DNA helicase [Persephonella marina EX-H1]
Length = 653
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 268/558 (48%), Gaps = 100/558 (17%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH------EVEVQMVRNTLPRR 382
+ +D +F RM G + F E S + +LG E E+Q +L
Sbjct: 123 WRIDLFVNDITFKRMSGTLHMF---EKGYSFFPEDTVLGDNGYTVCEEEIQFFNESL--- 176
Query: 383 FGAPGLPELNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
N Q AVK +V + +I GPPGTGKT T ++ +G +VL A
Sbjct: 177 ---------NQFQREAVKKAVCSDKLFMIHGPPGTGKTTTLLEVIIQHVSKGD-RVLATA 226
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSR-------EAVSSPVEHLTLHYQVRHLDTSEKS 494
SN AVD + E + G+ VVR+ +R ++ + E + +VR ++
Sbjct: 227 DSNTAVDNIVEGLVERGVNVVRIGHPARLKKELLDVSLDAVAESHPDYNEVRSIE----K 282
Query: 495 ELHKLQQLKDEQGE--------LSSSDEKKY-------------------------KALK 521
++ KL+ L++ + LS SD KY K +K
Sbjct: 283 KIKKLKSLQESYKKPTAQRRRGLSYSDILKYAKSGKKVRGHRIETLKSMAEWIRLQKEIK 342
Query: 522 RATER----------EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIP 571
+ ++R +I SA+VIC T AG L+++ F V IDE++Q+TEP CLIP
Sbjct: 343 KLSDRKRKIEDRIINDILNSAEVICATNSTAGSEFLSDYVFDVVFIDEASQSTEPSCLIP 402
Query: 572 LVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSL 630
++ G K VV+ GDH QL P ++ A L+ ++FER + + L++QYRM+ +
Sbjct: 403 VIKGLK-VVMAGDHKQLPPTVLNPDA--KDLSFTMFERFMKIYPENTYMLKIQYRMNDII 459
Query: 631 SEFPSNSFYEGTLQNGVTINERQSSGI-----DFPWPVPNRPMFFYVQMGQ--EEISASG 683
+FPS FY+G L + ++ +R+ S I D P + P+ F G+ E+
Sbjct: 460 KQFPSEEFYDGQLISDESVKDRKLSDITGKEGDAPI-TDDTPVVFIDTEGKFLEKQKKGS 518
Query: 684 TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S N EA V+ IV GV+ IGVITPY+ Y+ +++ ++
Sbjct: 519 RSKYNPEEAKAVKSIVEKLKEIGVLTEDIGVITPYKDHEDYL-----------KKIIPDV 567
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
EV +VD FQGREK+ I++S VRSN + IGFL+D RRLNVALTRA+ ++I+G+ K LS
Sbjct: 568 EVKTVDGFQGREKEVIVISLVRSNPEEEIGFLDDLRRLNVALTRAKRKVIIIGDSKTLSS 627
Query: 804 QPLWNGLLTHYKEHECLV 821
+ L+ KE V
Sbjct: 628 NETYRKLIKFIKEKGTFV 645
>gi|198274180|ref|ZP_03206712.1| hypothetical protein BACPLE_00320 [Bacteroides plebeius DSM 17135]
gi|198272855|gb|EDY97124.1| putative DNA helicase [Bacteroides plebeius DSM 17135]
Length = 630
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 245/459 (53%), Gaps = 45/459 (9%)
Query: 380 PRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVL 438
P RF P LNA+Q AV VL + ++++ GPPGTGKT T +Y + + QVL
Sbjct: 186 PVRF-----PWLNATQDEAVNKVLHAKDVAIVHGPPGTGKTTTLVEAIYETLHR-ENQVL 239
Query: 439 VCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSE 495
VCA SN+AVD ++EK+ G+ V+R+ SR V+ + L+ Y+ R H D +
Sbjct: 240 VCAQSNMAVDWISEKLVDRGVSVLRIGNPSR--VNDKM--LSFTYERRFESHPDYPQLWS 295
Query: 496 LHK-LQQL--KDEQGELSSSDEKKYKALK-RATEREIS------QSADVICCTCVGAGDP 545
+ K +++L + +G S +K +LK RATE EI A VI CT VG+ +
Sbjct: 296 IRKAIRELYTRSRKGNDRESIRQKINSLKDRATELEIRINESLFSEARVIACTLVGSANR 355
Query: 546 RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQS 605
L +F V IDE+ QA E C IPL A +V+ GDHCQL P + +A RAGL +
Sbjct: 356 LLTGQKFGTVFIDEAAQALEAACWIPL-RKADRVIWAGDHCQLPPTVKNPEALRAGLGHT 414
Query: 606 LFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP 664
L + +V + + L +VQYRM+ + F S+ FY G LQ+ + R S +DF P+
Sbjct: 415 LMQAIVKNKPEVVSLLKVQYRMNDEIMRFSSDWFYGGMLQSAPEVKYR--SILDFDTPIE 472
Query: 665 NRPMFFYVQMG----QEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI--GV 714
+V EE +N+ EA +++ +T R + +I G+
Sbjct: 473 ------WVNTEGMDCNEEFVGENYGRINKPEAELSIGQLKEYITKIGRERFLEERIDVGL 526
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
I+PY+ Q Y+ + R A + I + +VD FQG+E+D I++S VR+NE IGF
Sbjct: 527 ISPYKAQVQYL-RQLVRKDAFFKPYRSLITINTVDGFQGQERDVILISLVRANEDGQIGF 585
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
LND RR+NVA+TRAR ++ILG+ L+K + L +
Sbjct: 586 LNDLRRMNVAITRARMKLIILGDASTLTKHAFYKKLYEY 624
>gi|336416735|ref|ZP_08597067.1| hypothetical protein HMPREF1017_04175 [Bacteroides ovatus
3_8_47FAA]
gi|335937173|gb|EGM99077.1| hypothetical protein HMPREF1017_04175 [Bacteroides ovatus
3_8_47FAA]
Length = 645
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 241/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 196 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 249
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 250 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 305
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 306 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 365
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +A+
Sbjct: 366 VSSNHRLLNGRRFSTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEASC 424
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 425 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRGILDFD 484
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ E+ +N+ EA + + + T++ + ++ +I
Sbjct: 485 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELETYIERIGKERILDERI 538
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 539 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 597
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKED 645
>gi|160885310|ref|ZP_02066313.1| hypothetical protein BACOVA_03309 [Bacteroides ovatus ATCC 8483]
gi|156109660|gb|EDO11405.1| putative DNA helicase [Bacteroides ovatus ATCC 8483]
Length = 649
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 241/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 200 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 253
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 309
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 310 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 369
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +A+
Sbjct: 370 VSSNHRLLNGRRFSTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEASC 428
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 429 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRGILDFD 488
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ E+ +N+ EA + + + T++ + ++ +I
Sbjct: 489 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELKTYIERIGKERILDERI 542
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 543 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 601
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 602 QIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKED 649
>gi|295084850|emb|CBK66373.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
Length = 649
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 241/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 200 RELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHR-E 253
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSSTYERRFESHPAYP 309
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 310 ELWGIRKSIREMGSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTL 369
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+L GDHCQL P I C +A+
Sbjct: 370 VSSNHRLLNGRRFSTLFIDEAAQALEAACWIA-IRKADRVILAGDHCQLPPTIKCIEASC 428
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRMH ++ +FPS+ FY G L+ + R D
Sbjct: 429 GGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRGILDFD 488
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ E+ +N+ EA + + + T++ + ++ +I
Sbjct: 489 TPMNW-IDTSEMDFH-----EDFVGESFGRINKQEANLLLQELETYIERIGKERILDERI 542
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + LR I V +VD FQG+E+D I +S VR+NE
Sbjct: 543 DFGLISPYKAQVQYLRGKIKGSSFLRP-FRSLITVNTVDGFQGQERDVIFISLVRANEDG 601
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG+ L+K P + L+ K+ +
Sbjct: 602 QIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKED 649
>gi|218191424|gb|EEC73851.1| hypothetical protein OsI_08612 [Oryza sativa Indica Group]
Length = 979
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 188/597 (31%), Positives = 278/597 (46%), Gaps = 71/597 (11%)
Query: 277 LVPGDELRLRYS---GDAAHPAWQSVGHVIKLTAQE-EVALELRASQGVPVDINHGFSVD 332
L PGD + +R G+ A Q G V L + L L + G P FS
Sbjct: 370 LSPGDMVCVRTCNSRGEGATSCMQ--GFVYNLGEDGCSITLALESRHGDPT-----FSRL 422
Query: 333 FVWKSTSFDRMQGAMKTF---------------AVDETSVSGYIYHHLLGHEVEVQMVRN 377
F KS DR+QG + +++ S + L G +V +
Sbjct: 423 F-GKSVRIDRIQGLADALTYERNLEALIILQRNGLQKSNASIGVVATLFGDNKDVMKMEQ 481
Query: 378 TLPRRFGAPGLPE--------LNASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAIVY 427
+G P+ L+ASQ+ A+ L +RP+ +IQGPPGTGKTV ++
Sbjct: 482 NHLTDWGESSAPDPRISERYALDASQLKALSLGLNKKRPVLIIQGPPGTGKTVLLTELIV 541
Query: 428 HMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLT-----LH 482
+QG+ VLV APSN AVD + E++S TGL +VR+ +R + S + L
Sbjct: 542 RAVQQGE-NVLVTAPSNAAVDNMVERLSNTGLNIVRVGNPARISPSVASKSLAEIVNRRL 600
Query: 483 YQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATE-------REISQSADVI 535
Q R ++S+L K E L++ + K L R E RE+ A V+
Sbjct: 601 EQFRKELERKRSDLRKDLSYCIEDDSLAAGIRQLLKQLGRDLEKKEKEMIREVLSEAQVV 660
Query: 536 CCTCVGAGDPRLA-NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
T GA DP + F V+IDE+ QA EP C IP++ G K+ +L GDHCQL PVI+
Sbjct: 661 LSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQG-KRCILAGDHCQLAPVILS 719
Query: 595 KKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
+K GL +SL ER L GL RL VQ+RM+ S++ + S Y G L++ ++ +
Sbjct: 720 RKVLDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQ 779
Query: 653 ---QSSGIDFPWPVPNRPMFFYVQM--------GQEEISASGT-SYLNRTEAANVEKIVT 700
S + W + +M E+I +GT S+ N EA V + V
Sbjct: 780 TLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLAGTGSFYNDGEADIVTQHVL 839
Query: 701 TFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYII 760
+ GV P+ I V +PY Q + + L +EV+++DSFQGRE D ++
Sbjct: 840 NLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGL-----SGVEVSTIDSFQGREADAVV 894
Query: 761 LSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+S VRSN +GFL D RR+NVA+TRA + ++ + + LL H + +
Sbjct: 895 ISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHIRRY 951
>gi|19075869|ref|NP_588369.1| DNA polymerase alpha-associated DNA helicase A (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676175|sp|O94247.1|HCS1_SCHPO RecName: Full=DNA polymerase alpha-associated DNA helicase A
gi|4239673|emb|CAA20863.1| DNA polymerase alpha-associated DNA helicase A (predicted)
[Schizosaccharomyces pombe]
Length = 660
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 279/532 (52%), Gaps = 55/532 (10%)
Query: 298 SVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
SV V+ + +++ L++ + +P + V V + T ++RM+ M F
Sbjct: 119 SVEGVVTRVHERHISVALKSEEDIPSSVTRLSVVKLVNRVT-YERMRHTMLEFKRSIPEY 177
Query: 358 SGYIYHHLLGHE-----VEVQMVRNTLPRRFGAPGLPELNASQVFAVK-SVLQRPISLIQ 411
+++ L+G + ++ +++ + + F ELNASQ AVK S+ + +SLI
Sbjct: 178 RNSLFYTLIGRKKADVSIDQKLIGDI--KYFN----KELNASQKKAVKFSIAVKELSLIH 231
Query: 412 GPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREA 471
GPPGTGKT T I+ + + + ++LVC SN+AVD + +++S++G+ +VRL +R
Sbjct: 232 GPPGTGKTHTLVEIIQQLVLRNK-RILVCGASNLAVDNIVDRLSSSGIPMVRLGHPAR-L 289
Query: 472 VSSPVEHLTLHYQVRHLDT-------SEKSE--LHKLQQLKD--EQGELSSSDE---KKY 517
+ S ++H +L R D SE + L K+ + K+ E+ E+ + K Y
Sbjct: 290 LPSILDH-SLDVLSRTGDNGDVIRGISEDIDVCLSKITKTKNGRERREIYKNIRELRKDY 348
Query: 518 KALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAK 577
+ + T I ++ V+ CT GAG +L RF V+IDE++QA EP+C IPL LG
Sbjct: 349 RKYEAKTVANIVSASKVVFCTLHGAGSRQLKGQRFDAVIIDEASQALEPQCWIPL-LGMN 407
Query: 578 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPS 635
+V+L GDH QL P + K+ S+FERLV L L +QYRMH +S+FPS
Sbjct: 408 KVILAGDHMQLSPNVQSKRPY-----ISMFERLVKSQGDLVKCFLNIQYRMHELISKFPS 462
Query: 636 NSFYEGTLQNGVTINERQSSGIDF--PWPVPNRPMFFYVQMG--QEEISASGT------S 685
++FY+ L + +R ++ + + P++FY +G QE+ + S
Sbjct: 463 DTFYDSKLVPAEEVKKRLLMDLENVEETELTDSPIYFYDTLGNYQEDDRSEDMQNFYQDS 522
Query: 686 YLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV 745
N EA V ++ L +G+ I V+TPY Q A I + G E+E+
Sbjct: 523 KSNHWEAQIVSYHISGLLEAGLEAKDIAVVTPYNAQVALIRQLLKEKGI-------EVEM 575
Query: 746 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 797
SVD QGREK+ II S VRSN+ + +GFL + RRLNVA+TR + + ++G+
Sbjct: 576 GSVDKVQGREKEAIIFSLVRSNDVREVGFLAEKRRLNVAITRPKRHLCVIGD 627
>gi|255691334|ref|ZP_05415009.1| DNA helicase [Bacteroides finegoldii DSM 17565]
gi|260622976|gb|EEX45847.1| putative DNA helicase [Bacteroides finegoldii DSM 17565]
Length = 628
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 243/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 179 RELYPVRF-----PWLNSTQETAVNKVLCARDVSIVHGPPGTGKTTTLVEAIYETLHR-E 232
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QV+VCA SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 233 PQVMVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFESHPAYP 288
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 289 ELWGIRKSIREMGGRMRRGSYEEREGMRSRMSRLRDRATELEIQINADLFDSARVIASTL 348
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 349 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCIEAAR 407
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRM+ ++ +FPS+ FY+G L+ + R D
Sbjct: 408 GGLEYTLMEKVVRQKPSSVSLLKVQYRMNEAIMQFPSDWFYQGELEAAPEVRYRGILDFD 467
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ EE +N+ EA + + + ++ + ++ +I
Sbjct: 468 SPMSW-IDTSEMEFH-----EEFVGESFGRINKQEANLLLEELEAYINRIGKERILEERI 521
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + + LR L I V +VD FQG+E+D + +S VR+NE
Sbjct: 522 DFGLISPYKAQVQYLRSKIKGSSFLRP-LRSLITVNTVDGFQGQERDVVFISLVRANEEG 580
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG L+K P + L+ K+ +
Sbjct: 581 QIGFLNDLRRMNVAITRARMKLVILGEAATLTKHPFYKRLMAFIKKED 628
>gi|423344038|ref|ZP_17321751.1| hypothetical protein HMPREF1077_03181 [Parabacteroides johnsonii
CL02T12C29]
gi|409213558|gb|EKN06575.1| hypothetical protein HMPREF1077_03181 [Parabacteroides johnsonii
CL02T12C29]
Length = 637
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 259/512 (50%), Gaps = 45/512 (8%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPE 390
V + TS+ M A+ T + + Y+ LLG + R P RF P
Sbjct: 136 VQLYFDETSYKTMFNALSTVIQAKGNRLAYLRDVLLGKTPAGR--RTLFPMRF-----PW 188
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN AVD
Sbjct: 189 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCAQSNTAVDW 247
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LKDEQGE 508
++EK+ G+ V+R+ +R V+ + L+ Y+ R + +EL +++ +++ Q
Sbjct: 248 ISEKLVDRGIHVLRIGNPTR--VNDKM--LSFTYERRFESHPDYAELWGIRKAIREIQSN 303
Query: 509 LSSSDEKKYKALK--------RATEREIS------QSADVICCTCVGAGDPRLANFRFRQ 554
L + + ++ RATE E+ A V+ CT VG+ + L N F
Sbjct: 304 LRRKSHSEKETVRNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTT 363
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
+ IDE+ QA E C I + A +V+L GDH QL P I C +AAR GL +L +++
Sbjct: 364 LFIDEAAQALEAACWIA-IGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRK 422
Query: 615 LKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--WPVPNRPMFFY 671
+ + L + QYRM+ S+ FPS FY LQ+ + R D P W F
Sbjct: 423 PETVSLLKTQYRMNESIMRFPSRWFYRDELQSAPEVKHRGILEFDTPVVWLDTADCHF-- 480
Query: 672 VQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI--GVITPYEGQRAYI 725
+E+ S +N+ EA + ++K + + V+ I G+I+PY+ Q YI
Sbjct: 481 ----EEDQLTDSMSRINKDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYI 536
Query: 726 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
+ RN + + I V +VD FQG+E+D I++S VR+N+ IGFL D RR+NVA+
Sbjct: 537 RGLVKRN-VFFKPFRRLITVHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAI 595
Query: 786 TRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
TRAR ++ILG+ L++ + L + +E+
Sbjct: 596 TRARMKLMILGDAPTLTRHAFYKELYEYIREN 627
>gi|256840040|ref|ZP_05545549.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738970|gb|EEU52295.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 640
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 264/511 (51%), Gaps = 41/511 (8%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 385
++ V + TS+ M A+ + + ++ LLG E Q R P RF
Sbjct: 130 SNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPGQ--RELFPIRF-- 185
Query: 386 PGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
P LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN
Sbjct: 186 ---PWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVIVCAQSN 241
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LK 503
AVD ++EK+ G+ V+R+ +R ++ + L+ Y+ R + EL +++ ++
Sbjct: 242 TAVDCISEKLVDRGINVLRIGNPTR--INDKM--LSFTYERRFESHPDYPELWSIRKAVR 297
Query: 504 DEQGELSSSDEKKYKALK--------RATEREIS------QSADVICCTCVGAGDPRLAN 549
D Q + ++ ++ RATE E+ A V+ CT VG+ + + N
Sbjct: 298 DIQSNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMN 357
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F + IDE+ QA E C I + A +V+L GDH QL P I C +A R GL ++L ++
Sbjct: 358 RHFTTLFIDEAAQALEAACWIA-IGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQK 416
Query: 610 LVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
+ + + L ++QYRMH + F S FY L++ ++ R +D P +
Sbjct: 417 IAHTKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSE 476
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYEGQR 722
+ + +EE S +NR EA + + + +++ + V+ I G+I+PY+ Q
Sbjct: 477 CDFTENTREE----TMSRVNRQEAELLVEQLRSYIQKISKERVLEEHIDFGLISPYKAQV 532
Query: 723 AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
YI + ++ A + L + I V +VD FQG+E+D I++S VR+NE IGFLND RR+N
Sbjct: 533 QYIRKLIKQD-AFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMN 591
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
VA+TRAR ++ILG+ L++ +N L +
Sbjct: 592 VAITRARMKLMILGDASTLTRHAFYNELYNY 622
>gi|71026185|ref|XP_762778.1| hypothetical protein [Theileria parva strain Muguga]
gi|68349730|gb|EAN30495.1| hypothetical protein, conserved [Theileria parva]
Length = 1158
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 215/426 (50%), Gaps = 58/426 (13%)
Query: 395 QVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQG-QGQVLVCAPSNVAVDQLAEK 453
Q A S L+ P++LIQGPPGTGKT + AI+ AK ++L A SN+A D L +
Sbjct: 718 QYTACMSALRNPLTLIQGPPGTGKTHVACAIIDCWAKLNPTNRILAVADSNIAADNLIDA 777
Query: 454 ISATGLKVVRLCAKSR-EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
++ G+ +R+ S E ++ + Q+ +D + KL+Q S
Sbjct: 778 LTRKGINALRIGQSSEYELQEDSIKRIFTLRQLNCIDLERYNSYVKLRQ---------SG 828
Query: 513 DEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL 572
K+ K LK E + ++I TCVG+G+ L N++F V+IDE +Q+ E LIP+
Sbjct: 829 YYKEAKNLKVLLYSEAIKQHNIIIATCVGSGNDLLHNYQFSHVIIDECSQSIEMSNLIPI 888
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQYRMHPSLS 631
G K +VL+GDH QL P I+ A + GL +SL ERL+ + P+ L VQ RMHPS+
Sbjct: 889 GKGCKSLVLIGDHKQLRPTIISNHALKLGLDKSLLERLIEEEVAPVHMLNVQRRMHPSII 948
Query: 632 EFPSNSFYEGTLQNGVTIN------ERQSSGID-FPWPVPNRPMFFYVQMGQEEISAS-- 682
EFP+ FY + + +N E S I F WPV + F ++S S
Sbjct: 949 EFPNMHFYSNKIHSQGNVNCVYNVGEVNRSRIRGFKWPVECYNVVFI------DVSTSPS 1002
Query: 683 -------GTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 735
G S N E V ++ +FLR+ V G+ +G
Sbjct: 1003 TQFELPQGKSKSNLIEVKCVMALLNSFLRANDVKEHQGL----------------ESGM- 1045
Query: 736 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
IEV SVD FQGREKD II + VRSN + IGFL DPRR+NV LTRAR G+VIL
Sbjct: 1046 -------IEVDSVDGFQGREKDLIIFTAVRSNLVKDIGFLKDPRRMNVMLTRARRGLVIL 1098
Query: 796 GNPKVL 801
G+ L
Sbjct: 1099 GDSHTL 1104
>gi|393785219|ref|ZP_10373372.1| hypothetical protein HMPREF1071_04240 [Bacteroides salyersiae
CL02T12C01]
gi|392662922|gb|EIY56477.1| hypothetical protein HMPREF1071_04240 [Bacteroides salyersiae
CL02T12C01]
Length = 634
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 248/466 (53%), Gaps = 49/466 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RELYPVRF-----PWLNSTQEEAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD +AEK+ G+ V+R+ +R V+ + L+ Y+ R + +
Sbjct: 236 NQVLVCAQSNTAVDWIAEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFENHPAYT 291
Query: 495 ELHKLQQ-LKDEQGELSSSDEKKYKALK--------RATEREI------SQSADVICCTC 539
EL +++ +++ G + + + ++++ RATE EI SA VI T
Sbjct: 292 ELWSVRKSIREISGHIRKGNYSERESMRNRISRLRDRATELEILINEDLFSSARVIASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILEGRRFSTLFIDEAAQALEAACWIA-IRKADRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
GL Q+L E++V KP+ L+VQYRM+ ++ FPS FY L++ + R
Sbjct: 411 GGLDQTLMEKVV--TNKPVSVSLLKVQYRMNEAIMRFPSEWFYNNQLESAPEVRHRGILD 468
Query: 657 IDFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR----SGVVPS 710
D P W + F EE +N+ EA + + + +++ + V
Sbjct: 469 YDTPMVWIDTSELEF------HEEFVGESFGRINKPEADLLIQELKNYIQRIGENRVFDE 522
Query: 711 QI--GVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSN 767
+I G+I+PY+ Q Y+ N + + R ++E I + +VD FQG+E+D I +S VR+N
Sbjct: 523 RIDFGLISPYKAQVQYLRNKIKSSSFFRP--FRELITINTVDGFQGQERDVIFISLVRAN 580
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
E+ IGFLND RR+NVA+TRAR +VILG + L++ + L+ +
Sbjct: 581 ENGQIGFLNDLRRMNVAITRARMKLVILGEAQTLTRHAFYKKLMEY 626
>gi|255013517|ref|ZP_05285643.1| putative helicase [Bacteroides sp. 2_1_7]
gi|410103629|ref|ZP_11298550.1| hypothetical protein HMPREF0999_02322 [Parabacteroides sp. D25]
gi|409236358|gb|EKN29165.1| hypothetical protein HMPREF0999_02322 [Parabacteroides sp. D25]
Length = 640
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 264/511 (51%), Gaps = 41/511 (8%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 385
++ V + TS+ M A+ + + ++ LLG E Q R P RF
Sbjct: 130 SNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPGQ--RELFPIRF-- 185
Query: 386 PGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
P LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN
Sbjct: 186 ---PWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVIVCAQSN 241
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LK 503
AVD ++EK+ G+ V+R+ +R ++ + L+ Y+ R + EL +++ ++
Sbjct: 242 TAVDCISEKLVDRGINVLRIGNPTR--INDKM--LSFTYERRFESHPDYPELWSIRKAVR 297
Query: 504 DEQGELSSSDEKKYKALK--------RATEREIS------QSADVICCTCVGAGDPRLAN 549
D Q + ++ ++ RATE E+ A V+ CT VG+ + + N
Sbjct: 298 DIQSNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMN 357
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F + IDE+ QA E C I + A +V+L GDH QL P I C +A R GL ++L ++
Sbjct: 358 RHFTTLFIDEAAQALEAACWIA-IGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQK 416
Query: 610 LVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
+ + + L ++QYRMH + F S FY L++ ++ R +D P +
Sbjct: 417 IAHTKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSE 476
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYEGQR 722
+ + +EE S +NR EA + + + +++ + V+ I G+I+PY+ Q
Sbjct: 477 CDFTENTREE----TMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQV 532
Query: 723 AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
YI + ++ A + L + I + +VD FQG+E+D I++S VR+NE IGFLND RR+N
Sbjct: 533 QYIRKLIKQD-AFFKPLRRLITIHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMN 591
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
VA+TRAR ++ILG+ L++ +N L +
Sbjct: 592 VAITRARMKLMILGDASTLTRHAFYNELYNY 622
>gi|218128722|ref|ZP_03457526.1| hypothetical protein BACEGG_00293 [Bacteroides eggerthii DSM 20697]
gi|217989177|gb|EEC55492.1| putative DNA helicase [Bacteroides eggerthii DSM 20697]
Length = 636
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 242/469 (51%), Gaps = 49/469 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 184 RELYPVRF-----PWLNSTQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHR-E 237
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN+AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 238 PQVLVCAQSNMAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFENHPLYP 293
Query: 495 ELHKLQQLKDEQG---ELSSSDEK------------KYKALKRATEREISQSADVICCTC 539
EL +++ + G S DE+ + AL+ E+ SA VI T
Sbjct: 294 ELWSIRKELRQLGGRARRGSYDEREGIRSRMSRLRDRATALEVQINTELFDSAHVIASTL 353
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 354 VSSNHRLLNGRRFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAAR 412
Query: 600 AGLAQSLFERLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
GL ++L E++ KP L+VQYRMH + F SN FY+G L+ I R
Sbjct: 413 GGLERTLMEKVA--ANKPSAVSLLKVQYRMHEDIMRFSSNWFYDGELEAAPEIRHRGILD 470
Query: 657 IDFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF-LRSG---VVPS 710
D P W + M F +EE +N+ EA + K + + LR G ++
Sbjct: 471 WDTPVTW-IDTSDMDF-----KEEFVGETFGRINKEEAHLLLKELEAYILRIGGSRILEE 524
Query: 711 QI--GVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSN 767
+I G+I+PY+ Q Y+ + + LR Y+ I V +VD FQG+E+D I +S VR+N
Sbjct: 525 RIDFGLISPYKAQVQYLRGKIKGSATLRP--YRSLITVNTVDGFQGQERDVIFISLVRAN 582
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
E IGFLND RR+NVA+TRAR +VILG L + LL + K+
Sbjct: 583 EEGQIGFLNDLRRMNVAITRARMKLVILGEAATLGHHAFYKQLLEYVKK 631
>gi|298375719|ref|ZP_06985676.1| DNA helicase [Bacteroides sp. 3_1_19]
gi|298268219|gb|EFI09875.1| DNA helicase [Bacteroides sp. 3_1_19]
Length = 640
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 263/511 (51%), Gaps = 41/511 (8%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 385
++ V + TS+ M A+ + + ++ LLG E Q R P RF
Sbjct: 130 SNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPRQ--RELFPIRF-- 185
Query: 386 PGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
P LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN
Sbjct: 186 ---PWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVIVCAQSN 241
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LK 503
AVD ++EK+ G+ V+R+ +R ++ + L+ Y+ R + EL +++ ++
Sbjct: 242 TAVDCISEKLVDRGINVLRIGNPTR--INDKM--LSFTYERRFESHPDYPELWSIRKAVR 297
Query: 504 DEQGELSSSDEKKYKALK--------RATEREIS------QSADVICCTCVGAGDPRLAN 549
D Q + ++ ++ RATE E+ A V+ CT VG+ + + N
Sbjct: 298 DIQSNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMN 357
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F + IDE+ QA E C I + A +V+L GDH QL P I C +A R GL ++L ++
Sbjct: 358 RHFTTLFIDEAAQALEAACWIA-IGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQK 416
Query: 610 LVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
+ + + L ++QYRMH + F S FY L++ ++ R +D P +
Sbjct: 417 IAHTKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSE 476
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYEGQR 722
+ + +EE S +NR EA + + +++ + V+ I G+I+PY+ Q
Sbjct: 477 CDFTENTREE----TMSRVNRQEAELLVEQSRSYIQKISKERVLEENIDFGLISPYKAQV 532
Query: 723 AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
YI + ++ A + L + I V +VD FQG+E+D I++S VR+NE IGFLND RR+N
Sbjct: 533 QYIRKLIKQD-AFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMN 591
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
VA+TRAR ++ILG+ L++ +N L +
Sbjct: 592 VAITRARMKLMILGDASTLTRHAFYNELYNY 622
>gi|218261116|ref|ZP_03476067.1| hypothetical protein PRABACTJOHN_01731 [Parabacteroides johnsonii
DSM 18315]
gi|218224216|gb|EEC96866.1| hypothetical protein PRABACTJOHN_01731 [Parabacteroides johnsonii
DSM 18315]
Length = 638
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 261/512 (50%), Gaps = 45/512 (8%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPE 390
V + TS+ M A+ T + + Y+ LLG + R P RF P
Sbjct: 137 VQLYFDETSYKTMFNALSTVIQAKGNRLAYLRDVLLGKTPAGR--RTLFPMRF-----PW 189
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN AVD
Sbjct: 190 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCAQSNTAVDW 248
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LKDEQGE 508
++EK+ G+ V+R+ +R V+ + L+ Y+ R + +EL +++ +++ Q
Sbjct: 249 ISEKLVDRGIHVLRIGNPTR--VNDKM--LSFTYERRFESHPDYAELWGIRKAIREIQSN 304
Query: 509 L--SSSDEK-----KYKALK-RATEREIS------QSADVICCTCVGAGDPRLANFRFRQ 554
L S EK + L+ RATE E+ A V+ CT VG+ + L N F
Sbjct: 305 LRRKSHSEKETGRNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTT 364
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
+ IDE+ QA E C I + A +V+L GDH QL P I C +AAR GL +L +++
Sbjct: 365 LFIDEAAQALEAACWIA-IGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRK 423
Query: 615 LKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--WPVPNRPMFFY 671
+ + L + QYRM+ S+ FPS FY LQ+ + R D P W F
Sbjct: 424 PETVSLLKTQYRMNESIMRFPSRWFYRDELQSAPEVKHRGILEFDTPVVWLDTADCHF-- 481
Query: 672 VQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI--GVITPYEGQRAYI 725
+E+ S +N+ EA + ++K + + V+ I G+I+PY+ Q YI
Sbjct: 482 ----EEDQLTDSMSRINKDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYI 537
Query: 726 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
+ RN + + I V +VD FQG+E+D I++S VR+N+ IGFL D RR+NVA+
Sbjct: 538 RGLVKRN-VFFKPFRRLITVHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAI 596
Query: 786 TRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
TRAR ++ILG+ L++ + L + +E+
Sbjct: 597 TRARMKLMILGDAPTLTRHAFYKELYEYIREN 628
>gi|343427563|emb|CBQ71090.1| related to regulator of nonsense transcripts 1 [Sporisorium
reilianum SRZ2]
Length = 916
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 170/518 (32%), Positives = 245/518 (47%), Gaps = 108/518 (20%)
Query: 388 LPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCAPSNV 445
LPELN SQ AV +L+ +SLIQGPPGTGKT T + + + + +++ A +NV
Sbjct: 336 LPELNRSQTQAVAMMLRERVSLIQGPPGTGKTRTIVTAIKLLKQDFRVPHPIMLAAHTNV 395
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLH-YQVRH-----LDTSEKSELHKL 499
AVD LA+ GL+VVR+ +R + ++ TL Y +RH LD +K L L
Sbjct: 396 AVDNLADGCIKAGLRVVRIGPSAR--ARAGIDEYTLDAYFLRHPAKPRLDQIKK-RLDTL 452
Query: 500 QQLKDE----------------------QGELS--------------------------- 510
+LK E +GE +
Sbjct: 453 DRLKSEYELGRMGGFGTSSGSALREELEEGEAAIVPKEAQSWEDVMAEREEEREAAQPQG 512
Query: 511 SSDEKKYKALKRATER--------------EISQSADVICCTCVGAGDPRLANFRFRQVL 556
+ ++Y+A+K+ R EI ADVIC + + AG P L V
Sbjct: 513 GTASEEYEAIKKQLNRLKATYFFLRASIRGEILNGADVICGSAIAAGSPELDMIDLPVVF 572
Query: 557 IDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL--LG 614
DE++ ATEP L+PL+ G + + ++GDH QL PV+ +A + GL++SLFERL+
Sbjct: 573 FDEASMATEPVSLVPLMKGCRHLSIIGDHKQLPPVVTSVEAKQGGLSRSLFERLIQSESN 632
Query: 615 LKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP-----WPVPNRP-- 667
+ L VQ+RMHPSL+EFP+ +FY+G L+NG Q + + P WP
Sbjct: 633 IPSTMLNVQFRMHPSLAEFPNKTFYDGALENG------QGTELIAPVASSYWPASGNTAA 686
Query: 668 ------MFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG--VVPSQIGVITPYE 719
+ F G+E + + TS N EA V +V LR + IGV+TPY
Sbjct: 687 DKNAHRLCFIDHKGRETKAENSTSLCNAAEARIVVDVVVDLLRQNPELTGDDIGVVTPYA 746
Query: 720 GQRAYIVNYMSRNG-----------ALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE 768
GQ+ + + A R I++ +VD F+GREK I+ S VR+N
Sbjct: 747 GQQILLEKMLHNEASPARKQAASVLATRASELGSIDMHTVDGFEGREKKVILFSTVRTNA 806
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
H +GFL D RRLNVALTRA+ + ++GN K L
Sbjct: 807 HGYVGFLADARRLNVALTRAQSALFLIGNIDTFKKAQL 844
>gi|317479605|ref|ZP_07938732.1| hypothetical protein HMPREF1007_01848 [Bacteroides sp. 4_1_36]
gi|316904267|gb|EFV26094.1| hypothetical protein HMPREF1007_01848 [Bacteroides sp. 4_1_36]
Length = 631
Score = 223 bits (567), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 164/464 (35%), Positives = 240/464 (51%), Gaps = 49/464 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 180 RELYPVRF-----PWLNSTQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHR-E 233
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 234 PQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFENHPLYP 289
Query: 495 ELHKLQQLKDEQGELS---SSDEK------------KYKALKRATEREISQSADVICCTC 539
EL +++ E G + S DE+ + AL+ E+ A VI T
Sbjct: 290 ELWSIRKNLRELGSRARRGSYDEREGVRSRMSRLRDRATALEIQINSELFDGAHVIASTL 349
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 350 VSSNHRLLNGRRFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAAR 408
Query: 600 AGLAQSLFERLVLLGLKPI---RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
GL ++L E++V KP L+VQYRMH + +FPS FY G L+ + R
Sbjct: 409 GGLERTLMEKVV--SNKPAVVSLLKVQYRMHEEIMKFPSQWFYNGELEAASEVRYRGILD 466
Query: 657 IDFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPS 710
D P W + M F +EE +N+ EA + ++ + + ++
Sbjct: 467 WDTPIHW-IDTSEMDF-----KEEFVGETFGRINKAEADLLLSELKIYINRISGNRILEE 520
Query: 711 QI--GVITPYEGQRAYIVNYMSRNGALRQQLYKEI-EVASVDSFQGREKDYIILSCVRSN 767
+I G+I+PY+ Q Y+ N + + +L+ Y+ + V +VD FQG+E+D I +S VR+N
Sbjct: 521 KIDFGIISPYKAQVQYLRNKIKADASLKP--YRSLFTVNTVDGFQGQERDVIFISLVRAN 578
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
E IGFLND RR+NVA+TRAR +VILG + L + LL
Sbjct: 579 EEGQIGFLNDLRRMNVAITRARMKLVILGEAETLKHHGFYRKLL 622
>gi|423312487|ref|ZP_17290424.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
gi|392688175|gb|EIY81464.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
Length = 630
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 157/455 (34%), Positives = 242/455 (53%), Gaps = 38/455 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
FG P LN +Q AV V+ + ++++ GPPGTGKT T +Y + + QV+VCA
Sbjct: 184 FGFTRFPWLNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCA 242
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++EK+ G+ V+R+ +R V+ + L Y+ R H D + + K
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR--VNDKM--LAFTYERRFESHPDYPQLWSIRK 298
Query: 499 -LQQL--KDEQGELSSSDEKKYKALK-RATEREISQS------ADVICCTCVGAGDPRLA 548
+++L + +G + +K +LK RATE EI + A VI CT V + + L
Sbjct: 299 AIRELYGRSRKGAERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRILT 358
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
+F + IDE+ QA EP C I + A +V+L GD+CQL P I C +AAR GL ++L +
Sbjct: 359 GRKFSTLFIDEAAQALEPACWIA-IRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQ 417
Query: 609 RLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
+ KP L+VQYRM+ + F S FY+G L++ + R D P N
Sbjct: 418 EIA--DNKPDTVSLLKVQYRMNDEIMRFSSEWFYQGELKSAPEVKYRSILDYDTPIEWIN 475
Query: 666 RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYE 719
EE +N+ EAA +T ++ + + +I G+I+PY+
Sbjct: 476 TEGM----ECNEEFVGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLISPYK 531
Query: 720 GQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q Y+ + R+ + Y+ I + +VD FQG+E+D I++S VR+NE IGFLND
Sbjct: 532 AQVQYLRQLIKRDAFFKP--YRHLITINTVDGFQGQERDVILISLVRANEEGQIGFLNDL 589
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
RR+NVA+TRAR ++ILG+ L+K P + L +
Sbjct: 590 RRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|213407736|ref|XP_002174639.1| DNA-binding protein SMUBP-2 [Schizosaccharomyces japonicus yFS275]
gi|212002686|gb|EEB08346.1| DNA-binding protein SMUBP-2 [Schizosaccharomyces japonicus yFS275]
Length = 655
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 296/584 (50%), Gaps = 67/584 (11%)
Query: 280 GDELRLRYSGDA-------AHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVD 332
GD +R++ SG + + +W +V V+++ + ++L L +P D +
Sbjct: 94 GDVVRIQESGASKSLNSADSSISWDAV--VVRVR-ENTISLALENDDKIP-DGRKRLWIF 149
Query: 333 FVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL--PE 390
+ +F++M+ ++ + S + LLG M ++TL A +
Sbjct: 150 KLANRVTFEKMRSCIQQLSKISLESSTPLVSVLLG------MRKSTLASEELALTYYNTD 203
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AV + P ++LI GPPGTGKT T +V AK GQ +VLVC PSN++VD
Sbjct: 204 LNESQKKAVSFAVSAPELALIHGPPGTGKTHTLVEVVRQFAKLGQ-RVLVCGPSNLSVDN 262
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHY--------QVRHLDTSEKSELH-KLQ 500
L E+++ G+ +VRL +R + V + +L Y +V + + LH K+
Sbjct: 263 LVERLAPCGIPMVRLGHPAR--LLPGVVNYSLAYLSRTGNAGEVLRAISQDADALHAKIS 320
Query: 501 QLKD--EQGELSSSDE---KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
+ K E+ E+ S K YK + R+I + V+ T GAG L++ +F V
Sbjct: 321 KTKSGREKREIYKSIRALNKDYKKYEDKVVRDIIARSQVVFATLHGAGSKLLSHKQFDVV 380
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLG 614
+IDE++QA E +C IPL L K+ +L GDH QL P + K G SLFE L+ G
Sbjct: 381 IIDEASQALEAQCWIPL-LQTKKAILAGDHHQLPPNVRTK-----GRYVSLFESLLSRYG 434
Query: 615 LKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER---QSSGIDFPWPVPNRPMFF 670
+ R L VQYRMH +S F S SFYEG L+ ++ +R SG++ + N ++F
Sbjct: 435 PRVKRFLNVQYRMHEVISAFSSKSFYEGQLKPDSSVKDRLLKDLSGVE-DTDLTNDALYF 493
Query: 671 YVQMGQ---EEISASGTSYL------NRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQ 721
Y M + +E S S S L N+ EA V + + +G+ PS+I +ITPY Q
Sbjct: 494 YDTMHEYFEDENSVSEKSVLLQMSKSNQWEAKIVCNHAASLVDAGLNPSEIAIITPYNAQ 553
Query: 722 RAYIVNYM-SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
+ N + RN A IEV S+DS QGREK+ II S VRSN+ + IGF+++ RR
Sbjct: 554 ATLLRNLLHERNLA--------IEVGSIDSVQGREKEAIIFSLVRSNDEREIGFMSEKRR 605
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGP 824
LNVA+TRA+ + ++G+ + + Y E +V P
Sbjct: 606 LNVAITRAKRHLCVVGDAMTVRNGSDFLKSWIDYMEENAIVLAP 649
>gi|345518256|ref|ZP_08797710.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
gi|254835551|gb|EET15860.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
Length = 630
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 157/455 (34%), Positives = 242/455 (53%), Gaps = 38/455 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
FG P LN +Q AV V+ + ++++ GPPGTGKT T +Y + + QV+VCA
Sbjct: 184 FGFTRFPWLNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCA 242
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++EK+ G+ V+R+ +R V+ + L Y+ R H D + + K
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR--VNDKM--LAFTYERRFESHPDYPQLWSIRK 298
Query: 499 -LQQL--KDEQGELSSSDEKKYKALK-RATEREISQS------ADVICCTCVGAGDPRLA 548
+++L + +G + +K +LK RATE EI + A VI CT V + + L
Sbjct: 299 AIRELYGRSRKGAERENIRQKINSLKDRATELEIRVNEALFGEARVIACTLVSSANRILT 358
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
+F + IDE+ QA EP C I + A +V+L GD+CQL P I C +AAR GL ++L +
Sbjct: 359 GRKFSTLFIDEAAQALEPACWIA-IRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQ 417
Query: 609 RLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
+ KP L+VQYRM+ + F S FY+G L++ + R D P N
Sbjct: 418 EIA--DNKPDTVSLLKVQYRMNDEIMRFSSEWFYQGELKSAPEVKYRSILDYDTPIEWIN 475
Query: 666 RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYE 719
EE +N+ EAA +T ++ + + +I G+I+PY+
Sbjct: 476 TEGM----ECNEEFVGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLISPYK 531
Query: 720 GQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q Y+ + R+ + Y+ I + +VD FQG+E+D I++S VR+NE IGFLND
Sbjct: 532 AQVQYLRQLIKRDAFFKP--YRHLITINTVDGFQGQERDVILISLVRANEEGQIGFLNDL 589
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
RR+NVA+TRAR ++ILG+ L+K P + L +
Sbjct: 590 RRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|384484388|gb|EIE76568.1| hypothetical protein RO3G_01272 [Rhizopus delemar RA 99-880]
Length = 1809
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 189/604 (31%), Positives = 289/604 (47%), Gaps = 102/604 (16%)
Query: 323 VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 382
+ I + S VW + AM+ +A E + H+ LG E+ + P
Sbjct: 1074 ISILNSLSPKTVWSMLRIMSLTTAMREYAALEG-----LEHYDLGPEI-----LSPTPTT 1123
Query: 383 FGAPGLP---------ELNASQVFAVKSVLQRP--ISLIQGPPGTGKTVTSAAIVYHMAK 431
P +N Q A+ S +Q+ SLIQGPPGTGKT T A++ +
Sbjct: 1124 MKKPSTSVIQQYCTNYNVNEPQAEAIASAIQKKKGFSLIQGPPGTGKTKTILALIVSLLD 1183
Query: 432 QGQG--QVLVCAPSNVAVDQLAEKI-----SATGLK---VVRL--------CAKSR---E 470
Q QG ++LVCAPSN AVD++ +++ +A G+K VVR+ K R
Sbjct: 1184 QRQGYSKLLVCAPSNAAVDEITKRLKEGVMTAQGIKKPNVVRIGVADSVNASVKDRILDR 1243
Query: 471 AVSSPVEHL---------------TLHYQVRHLD----------TSEKSELHKLQQLKDE 505
+ + +E TLH ++R+L T S++ ++ L+ +
Sbjct: 1244 LIEAEMEAKIGNDATMSKMGARLDTLHSEIRNLQIGLDDVDREITQAGSDMVQMSILRSK 1303
Query: 506 QGELSSSDEKKYKALKRA--------TEREISQ---------SADVICCTCVGAGDPRLA 548
+ L + K AL+ A E E+S+ +ADV+C T G+G L
Sbjct: 1304 RKALGAKLTKAKMALREAYQDQKNYGQEMEVSRVRARQKVFANADVVCATLSGSGHDMLT 1363
Query: 549 NF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
+ F V++DE+ Q+ E LIPL ++ +LVGD QL P +M AA+ QSL
Sbjct: 1364 SMGASFETVIVDEAAQSIEISSLIPLKFDTQRCILVGDPNQLPPTVMSTVAAKYDYQQSL 1423
Query: 607 FERL-VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW-PVP 664
F RL +G + L +QYRMHP +S FPS FY+ LQ+G ++ + SS I W +P
Sbjct: 1424 FMRLEKTVGKEVNLLSIQYRMHPEISTFPSKLFYQSRLQDGPGMD-KISSAI---WHALP 1479
Query: 665 NRP--MFFYVQMGQEEISASGTSYLNRTEA---ANVEKIVTTFLRSGVVPSQIGVITPYE 719
P F+ V+ GQE++ G S N EA + ++ T L + S+IGVITPY+
Sbjct: 1480 EFPPYCFYDVRDGQEKM-GRGKSIFNVAEADAAVCLVDLLLTKLPTIKFASKIGVITPYK 1538
Query: 720 GQRAYI-VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q + + R G + I+ +VD FQG+EK+ +I SCVR+ +GIGFL D
Sbjct: 1539 QQVGQLKARFQKRFG---NGIVDAIDFNTVDGFQGQEKEIVIFSCVRAGSGRGIGFLADM 1595
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
RR+NV LTRA+ + +LG+ + LS+ W L+ ++ + E + M + P
Sbjct: 1596 RRMNVGLTRAKCSLFVLGHARSLSRSEYWGDLVRDAEKRSLVRECGYPYFQHRMNGSKVP 1655
Query: 839 KKIY 842
+ IY
Sbjct: 1656 QNIY 1659
>gi|160889253|ref|ZP_02070256.1| hypothetical protein BACUNI_01675 [Bacteroides uniformis ATCC 8492]
gi|156861260|gb|EDO54691.1| putative DNA helicase [Bacteroides uniformis ATCC 8492]
Length = 637
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 164/464 (35%), Positives = 240/464 (51%), Gaps = 49/464 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 186 RELYPVRF-----PWLNSTQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHR-E 239
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 240 PQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFENHPLYP 295
Query: 495 ELHKLQQLKDEQGELS---SSDEK------------KYKALKRATEREISQSADVICCTC 539
EL +++ E G + S DE+ + AL+ E+ A VI T
Sbjct: 296 ELWSIRKNLRELGSRARRGSYDEREGVRSRMSRLRDRATALEIQINSELFDGAHVIASTL 355
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 356 VSSNHRLLNGRRFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAAR 414
Query: 600 AGLAQSLFERLVLLGLKPI---RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
GL ++L E++V KP L+VQYRMH + +FPS FY G L+ + R
Sbjct: 415 GGLERTLMEKVV--SNKPAVVSLLKVQYRMHEEIMKFPSQWFYNGELEAASEVRYRGILD 472
Query: 657 IDFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPS 710
D P W + M F +EE +N+ EA + ++ + + ++
Sbjct: 473 WDTPIHW-IDTSEMDF-----KEEFVGETFGRINKAEADLLLSELKIYINRISGNRILEE 526
Query: 711 QI--GVITPYEGQRAYIVNYMSRNGALRQQLYKEI-EVASVDSFQGREKDYIILSCVRSN 767
+I G+I+PY+ Q Y+ N + + +L+ Y+ + V +VD FQG+E+D I +S VR+N
Sbjct: 527 KIDFGIISPYKAQVQYLRNKIKADASLKP--YRSLFTVNTVDGFQGQERDVIFISLVRAN 584
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
E IGFLND RR+NVA+TRAR +VILG + L + LL
Sbjct: 585 EEGQIGFLNDLRRMNVAITRARMKLVILGEAETLKHHGFYRKLL 628
>gi|241953325|ref|XP_002419384.1| helicase, putative; tRNA-splicing endonuclease positive effector,
putative [Candida dubliniensis CD36]
gi|223642724|emb|CAX42978.1| helicase, putative [Candida dubliniensis CD36]
Length = 2009
Score = 222 bits (566), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 198/651 (30%), Positives = 296/651 (45%), Gaps = 116/651 (17%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-YHMAKQ---------------- 432
+N SQ A+ + SLIQGPPGTGKT T IV Y ++++
Sbjct: 1298 VNDSQARAIMGTFKSEGFSLIQGPPGTGKTKTILGIVGYSLSQEKNKKVIDISESGSSPA 1357
Query: 433 --GQGQVLVCAPSNVAVDQLAEKI-----SATG----LKVVRLCAKSREAVSSPVEHLTL 481
+ ++L+CAPSN AVD+L ++ +++G LKVVRL +A++S V LTL
Sbjct: 1358 PSDKAKILICAPSNAAVDELVLRLRDGVRNSSGEHMPLKVVRL--GRSDAINSSVRDLTL 1415
Query: 482 HYQV-RHLDT-------------------SEKSELHK----------------------- 498
V + L T +E+ EL K
Sbjct: 1416 EELVDKELQTKQTEVVIDPNIRLEHTKCINERDELRKRLATESLEDKDITELEEKIRAIN 1475
Query: 499 -----LQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--R 551
L + DEQ E +S + + +R + I A V+C T G+ +AN +
Sbjct: 1476 KKRSELAKKLDEQREKASIANRTKEINRRNIQARILSEAQVLCSTLSGSAHDLVANLSVQ 1535
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F QV+IDE+ Q E +IPL G ++ ++VGD QL P ++ + AA QSLF R+
Sbjct: 1536 FDQVIIDEACQCLELSAIIPLRYGCRKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQ 1595
Query: 612 LLGLKPI-RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNRPM 668
+ L VQYRMHP +S+FPS+ FY L++G + E + PW P P
Sbjct: 1596 KNHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDNMLELNTR----PWHKDPPLTPY 1651
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS-----QIGVITPYEGQRA 723
F+ +G+ E + S N EA ++ ++ ++P +G+I+PY+ Q
Sbjct: 1652 RFFDILGKHEKNELTRSLFNTDEAMVALQLTDKLMQ--IIPQDKFSGNVGIISPYKEQIR 1709
Query: 724 YIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNV 783
I R + + EI+ +VD FQG+EK+ II+SCVR++ +GFL+D RR+NV
Sbjct: 1710 KIKEVFVRKYG--KPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNV 1767
Query: 784 ALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG---------PLNNLKQSMVQ 834
ALTRA+ + ILGN + LS+ +W LLT E +C+ + P+ K++ V
Sbjct: 1768 ALTRAKTTLWILGNKESLSRNEVWRKLLTDADERKCVTQAYPGFLNSSNPVLKRKEASV- 1826
Query: 835 FQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP--PGPPNGTHKPGLH 892
F P++ Y ++ V I S R + A G +P PPNG
Sbjct: 1827 FIPPQEKYAKKQKVSNESERNV-QKIRNSMTMPAYRVTNA-GVLPSKTKPPNGNKNFNYQ 1884
Query: 893 PAGF-PMPRVPLPPF-QGGPPSQPYAIPSR-GAVHGPVGAVHHVPPPGSRG 940
P P P Q P +P+R G + PV A P P S G
Sbjct: 1885 TKNSQPTNNAPKPYINQPKPQDDSKNVPTRSGTISKPVAA--STPTPTSSG 1933
>gi|150007774|ref|YP_001302517.1| helicase [Parabacteroides distasonis ATCC 8503]
gi|149936198|gb|ABR42895.1| putative helicase [Parabacteroides distasonis ATCC 8503]
Length = 640
Score = 222 bits (566), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 263/511 (51%), Gaps = 41/511 (8%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 385
++ V + TS+ M A+ + + ++ LLG E Q R P RF
Sbjct: 130 SNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPGQ--RELFPIRF-- 185
Query: 386 PGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
P LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN
Sbjct: 186 ---PWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVIVCAQSN 241
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LK 503
AVD ++EK+ G+ V+R+ +R ++ + L+ Y+ R + EL +++ ++
Sbjct: 242 TAVDCISEKLVDRGINVLRIGNPTR--INDKM--LSFTYERRFESHPDYPELWSIRKAIR 297
Query: 504 DEQGELSSSDEKKYKALK--------RATEREIS------QSADVICCTCVGAGDPRLAN 549
D Q + ++ ++ RATE E+ A V+ CT VG+ + + N
Sbjct: 298 DIQSNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMN 357
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F + IDE+ QA E C I + A +V+L GDH QL P I C +A R GL ++L ++
Sbjct: 358 RHFTTLFIDEAAQALEAACWIA-ISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQK 416
Query: 610 LVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
+ + + L ++QYRMH + F S FY L++ ++ R +D P +
Sbjct: 417 IAHTKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSE 476
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYEGQR 722
+ + +EE S +NR EA + + + +++ + V+ I G+I+PY+ Q
Sbjct: 477 CDFTENTREE----TMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQV 532
Query: 723 AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
YI + ++ A + L + I V +VD FQG+E+D I++S VR+NE IGFLND RR+N
Sbjct: 533 QYIRKLIKQD-AFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMN 591
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
VA+TRAR ++ILG+ L++ + L +
Sbjct: 592 VAITRARMKLMILGDASTLTRHAFYKELYNY 622
>gi|326668922|ref|XP_003198895.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein-like [Danio rerio]
Length = 2464
Score = 222 bits (566), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 236/502 (47%), Gaps = 94/502 (18%)
Query: 387 GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAK-----QGQGQ----V 437
GL LN SQ A++ L P +LIQGPPGTGKTV I+Y + K Q G +
Sbjct: 1972 GLSHLNNSQSKAIREALTNPFTLIQGPPGTGKTVVGVHILYWLHKNIQQLQASGSKKRAI 2031
Query: 438 LVCAPSNVAVDQLAEKIS--ATGLKVVRLCAKSREAVSSP-------------------- 475
L C PSN +VD +A + LK +R+ + E + P
Sbjct: 2032 LYCGPSNKSVDVVAGHLLHLRDHLKPLRVYSDQMEMLEFPYPGCNLKLSRNSKRGEKPNT 2091
Query: 476 -VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKY--KALKRATEREISQSA 532
+ + LH+ +R +++ +K ++G+ + +E+K + LK+A + E+
Sbjct: 2092 ELSSIALHHLIRKEGNPFSTQIRAFD-MKVQRGDQLTDEERKLFREILKKARKHELLHH- 2149
Query: 533 DVICCTCVGAGDPRLA-NFRFRQVLIDESTQATEPECLIPLVLGA-KQVVLVGDHCQLGP 590
DVI CTC A P LA F+Q++IDE ATEPE IPLV +Q+VL+GDH QL P
Sbjct: 2150 DVILCTCTAASHPALAETLDFKQIIIDECAMATEPEAFIPLVAHKPEQIVLLGDHKQLQP 2209
Query: 591 VIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTIN 650
V+ C+ A R G+++SLFER + L L QYRM + FPSN FY G LQ G+
Sbjct: 2210 VVHCEVAERLGMSRSLFERYMENALM---LDTQYRMQEDICAFPSNEFYGGRLQTGI--- 2263
Query: 651 ERQSSGIDFPWPVPNRPMFFYVQMGQE-----EISASGTSYLNRTEAAN---------VE 696
P + F Q Q + S + RTE N E
Sbjct: 2264 -------------PAKSKLFLTQTKQTCIVFGHVEGKEKSLVVRTEQGNENSKANMEEAE 2310
Query: 697 KIVTTFLR----SGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQ 752
++V + +G+ I ++TPY Q A I + N ++I V ++ Q
Sbjct: 2311 EVVRDTQQLVKGAGIKTKDIAILTPYNAQVAKISESLHNNHI------RDITVNTIMRSQ 2364
Query: 753 GREKDYIILSCVRSNEHQGI-------------GFLNDPRRLNVALTRARYGIVILGNPK 799
G E Y+I+S VRS I GF+ DP ++NV +TRA+ G+ I+GN
Sbjct: 2365 GSEWRYVIMSTVRSCPKSEIETQPPKSWIMKRLGFITDPHQVNVGITRAQEGLCIIGNEN 2424
Query: 800 VLSKQPLWNGLLTHYKEHECLV 821
+L LW LL HY+E C+V
Sbjct: 2425 LLRCSSLWRKLLNHYQEKGCVV 2446
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 182/471 (38%), Gaps = 84/471 (17%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD-----QLAEKISATGLK 460
P LI GP GTGKT T A + + +Q ++L+C +N + D E + L
Sbjct: 444 PPLLIYGPFGTGKTRTLAKMAQALVQQPHNKILICTHTNSSADLYIKAHFHEYVRNGQLH 503
Query: 461 VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKAL 520
L K+ E + + +TL Y HL S + ++
Sbjct: 504 ARPLRIKAMEIKLASTDFITLQYC--HL----------------------SREANCFEFP 539
Query: 521 KRATEREISQSADVICCTCVGA--GDPRLANFRFRQVLIDESTQATEPECLIPLVLGAK- 577
+A + + VI T + D +L F +LIDE++Q E E L+ L L
Sbjct: 540 DKAV---LDSTRIVITTTSLARFFNDMKLPENYFSHILIDEASQMLECEALMALSLAGNN 596
Query: 578 -QVVLVGDHCQLGPVIMC---KKAARAGLAQSLF-----ERLVLLGLKPIRLQVQYRMHP 628
+VVL GDH Q+GP + K + L LF E + I YR
Sbjct: 597 TRVVLAGDHMQMGPKLFSVRPDKCSEHTLLNRLFYHYQAENSDVAKQSRIIFNENYRSTK 656
Query: 629 SLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP----MFFYVQMGQEEISASGT 684
+ +F S FY G +S I VP+ P + F+ G+ +
Sbjct: 657 DIVDFVSTHFYVG-----------RSDVIKARGNVPSHPQQHALQFHHVRGECCLDPMSM 705
Query: 685 SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY------EGQRAYIVNYMSRNGALRQQ 738
S+ N + V I+ ++ P + G P +G++ + Y R L
Sbjct: 706 SWFNAEQIVRVVHILQEIMKEW--PQEWGAADPESVCVLSQGRQVLEIRYRLRLLGL--- 760
Query: 739 LYKEIEVASVDSFQGREKDYIILSCVRSNE------HQGIGFLNDPRRLNVALTRARYGI 792
V + ++ QG++ I++S V + + + F ND R LN +TRA+ I
Sbjct: 761 --PRFTVENAENVQGKQFRVIVISTVHTKDSLLETDRTCLEFFNDMRVLNTIMTRAQSQI 818
Query: 793 VILGNPKVLSKQP------LWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
++G+ LS LW + E + L++LKQ +++ K
Sbjct: 819 FVVGDAAALSCHQFGMCWRLWRAYIEECINKESCHDLTLDSLKQDLLEISK 869
>gi|319643934|ref|ZP_07998509.1| helicase [Bacteroides sp. 3_1_40A]
gi|317384458|gb|EFV65425.1| helicase [Bacteroides sp. 3_1_40A]
Length = 630
Score = 222 bits (566), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 157/455 (34%), Positives = 242/455 (53%), Gaps = 38/455 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
FG P LN +Q AV V+ + ++++ GPPGTGKT T +Y + + QV+VCA
Sbjct: 184 FGFTRFPWLNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCA 242
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++EK+ G+ V+R+ +R V+ + L Y+ R H D + + K
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR--VNDKM--LAFTYERRFESHPDYPQLWSIRK 298
Query: 499 -LQQL--KDEQGELSSSDEKKYKALK-RATEREISQS------ADVICCTCVGAGDPRLA 548
+++L + +G + +K +LK RATE EI + A VI CT V + + L
Sbjct: 299 AIRELYGRSRKGAERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRILT 358
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
+F + IDE+ QA EP C I + A +V+L GD+CQL P I C +AAR GL ++L +
Sbjct: 359 GRKFSTLFIDEAAQALEPACWIA-IRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQ 417
Query: 609 RLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
+ KP L+VQYRM+ + F S FY+G L++ + R D P N
Sbjct: 418 EIA--DNKPDTVSLLKVQYRMNDEIMRFSSEWFYQGELKSAPEVKYRSILDYDTPIEWIN 475
Query: 666 RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYE 719
EE +N+ EAA +T ++ + + +I G+I+PY+
Sbjct: 476 TEGM----ECNEEFVGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLISPYK 531
Query: 720 GQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q Y+ + R+ + Y+ I + +VD FQG+E+D I++S VR+NE IGFLND
Sbjct: 532 AQVQYLRQLIKRDAFFKP--YRHLITINTVDGFQGQERDVILISLVRANEEGQIGFLNDL 589
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
RR+NVA+TRAR ++ILG+ L+K P + L +
Sbjct: 590 RRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|294778267|ref|ZP_06743693.1| putative DNA helicase [Bacteroides vulgatus PC510]
gi|294447895|gb|EFG16469.1| putative DNA helicase [Bacteroides vulgatus PC510]
Length = 630
Score = 222 bits (566), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 157/455 (34%), Positives = 242/455 (53%), Gaps = 38/455 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
FG P LN +Q AV V+ + ++++ GPPGTGKT T +Y + + QV+VCA
Sbjct: 184 FGFTRFPWLNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCA 242
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++EK+ G+ V+R+ +R V+ + L Y+ R H D + + K
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR--VNDKM--LAFTYERRFESHPDYPQLWSIRK 298
Query: 499 -LQQL--KDEQGELSSSDEKKYKALK-RATEREISQS------ADVICCTCVGAGDPRLA 548
+++L + +G + +K +LK RATE EI + A VI CT V + + L
Sbjct: 299 AIRELYGRSRKGAERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRILT 358
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
+F + IDE+ QA EP C I + A +V+L GD+CQL P I C +AAR GL ++L +
Sbjct: 359 GRKFSTLFIDEAAQALEPACWIA-IRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQ 417
Query: 609 RLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
+ KP L+VQYRM+ + F S FY+G L++ + R D P N
Sbjct: 418 EIA--DNKPDTVSLLKVQYRMNDEIMRFSSEWFYQGELKSAPEVKYRSILDYDTPIEWIN 475
Query: 666 RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYE 719
EE +N+ EAA +T ++ + + +I G+I+PY+
Sbjct: 476 TEGM----ECNEEFVGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLISPYK 531
Query: 720 GQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q Y+ + R+ + Y+ I + +VD FQG+E+D I++S VR+NE IGFLND
Sbjct: 532 AQVQYLRQLIKRDAFFKP--YRHLITINTVDGFQGQERDVILISLVRANEEGQIGFLNDL 589
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
RR+NVA+TRAR ++ILG+ L+K P + L +
Sbjct: 590 RRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|167764772|ref|ZP_02436893.1| hypothetical protein BACSTE_03163 [Bacteroides stercoris ATCC
43183]
gi|167697441|gb|EDS14020.1| putative DNA helicase [Bacteroides stercoris ATCC 43183]
Length = 631
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 242/466 (51%), Gaps = 45/466 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 180 RELYPVRF-----PWLNSTQESAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHR-E 233
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTS 491
QVLVCA SN+AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R H
Sbjct: 234 PQVLVCAQSNMAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFENHPLYP 289
Query: 492 EKSELHKLQQLKDEQGELSSSDEKK------YKALKRATEREIS------QSADVICCTC 539
E + K +L + S DE++ + RAT EI SA VI T
Sbjct: 290 ELWSIRKELRLLGGKSRRGSYDEREGIRNRMSRLRDRATTLEIQINSELFDSAHVIASTL 349
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 350 VSSNHRLLNGRRFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAAR 408
Query: 600 AGLAQSLFERLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
GL ++L E++V KP L+VQYRMH + F S+ FY G L+ I R G
Sbjct: 409 GGLERTLMEKVV--AGKPSAVSLLKVQYRMHEDIMRFSSDWFYGGELEAAPEIRHR---G 463
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR----SGVVPSQI 712
I W P + +EE +N+ EA + K + +++ + ++ +I
Sbjct: 464 I-LDWDTPVTWLDTSEMDFKEEFVGETFGRINKEEAGLLLKELEAYIQRIGGNRILEERI 522
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEH 769
G+I+PY+ Q Y+ + + +LR Y+ I V +VD FQG+E+D I +S VR+NE
Sbjct: 523 DFGLISPYKAQVQYLRGKIKGSASLRP--YRSLITVNTVDGFQGQERDVIFISLVRANEE 580
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
IGFLND RR+NVA+TRAR +VILG LS + LL + +
Sbjct: 581 GQIGFLNDLRRMNVAITRARMKLVILGEAATLSHHAFYKKLLEYVR 626
>gi|357137188|ref|XP_003570183.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium
distachyon]
Length = 975
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 264/552 (47%), Gaps = 63/552 (11%)
Query: 321 VPVDINHG---FSVDFVWKSTSFDRMQGAMKTF---------------AVDETSVSGYIY 362
V ++ HG FS F KS DR+QG + +++ S +
Sbjct: 404 VALESRHGDPTFSRLF-GKSVRIDRIQGLADALTYERNLEALMLLQRNGLQKSNASISVV 462
Query: 363 HHLLGHEVEVQMVRNTLPRRFGAPGLPEL--------NASQVFAVKSVL--QRPISLIQG 412
L G ++ + +G LP+L +ASQ+ A+ L +RP+ +IQG
Sbjct: 463 ATLFGDSKDMMKMEQNCLTDWGELSLPDLRLSERYAFDASQLRAISLGLNKKRPVLVIQG 522
Query: 413 PPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAV 472
PPGTGKTV A ++ +QG+ VLV APSN AVD + E++S+TGL +VR+ +R +
Sbjct: 523 PPGTGKTVLLAELIVRAVRQGE-NVLVTAPSNAAVDNMVERLSSTGLNIVRVGNPARISP 581
Query: 473 SSPVEHLTLHYQVR---HLDTSEKSELHKLQQLKD--EQGELSSSDEKKYKALKRATER- 526
S + L R + E+ + + L+D E L++ + K L R E+
Sbjct: 582 SVASKSLAEIVNGRLGQFMKELERKRTNLREDLRDCIEDDSLAAGIRQLLKQLGRDMEKK 641
Query: 527 ------EISQSADVICCTCVGAGDPRLANFR-FRQVLIDESTQATEPECLIPLVLGAKQV 579
E+ A V+ T GA DP + F V+IDE+ QA EP C IP++ G K+
Sbjct: 642 EKETIMEVLSDAQVVLSTNTGAADPHIRKAGCFDLVIIDEAGQAIEPSCWIPILQG-KRC 700
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSNS 637
+L GDHCQL P I+ +KA GL +S+ ER L GL RL VQ+RMH S++ + S
Sbjct: 701 ILAGDHCQLAPAILSRKALEGGLGKSMMERASSLHDGLLNSRLMVQHRMHDSIASWASKE 760
Query: 638 FYEGTLQNGVTINERQSSG---IDFPWPVPNRPMFFYVQM--------GQEEISASGT-S 685
Y G L++ +++ + + W + +M E + +GT S
Sbjct: 761 MYHGLLKSSHSVSSHLLADSPVVKATWITRCPLLLLDTRMPYGILNIDCVEHLDPAGTGS 820
Query: 686 YLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV 745
+ N EA V + V + GV PS I V +PY Q + L +E
Sbjct: 821 FYNDGEADIVTQHVLNLVHCGVSPSAIAVQSPYIAQVQLLREKFEEYPGL-----SGVEA 875
Query: 746 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 805
+++DSFQGRE D +++S VRSN +GF+ D R +NVA+TRAR + ++ + +
Sbjct: 876 STIDSFQGREADAVVISMVRSNPLGAVGFMGDSRLMNVAITRARRHVTVVCDTSTICHST 935
Query: 806 LWNGLLTHYKEH 817
LL H + H
Sbjct: 936 FLARLLRHIRRH 947
>gi|262381717|ref|ZP_06074855.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|423336431|ref|ZP_17314178.1| hypothetical protein HMPREF1059_00130 [Parabacteroides distasonis
CL09T03C24]
gi|262296894|gb|EEY84824.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|409240906|gb|EKN33680.1| hypothetical protein HMPREF1059_00130 [Parabacteroides distasonis
CL09T03C24]
Length = 640
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 263/511 (51%), Gaps = 41/511 (8%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 385
++ V + TS+ M A+ + + ++ LLG E Q R P RF
Sbjct: 130 SNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPGQ--RELFPIRF-- 185
Query: 386 PGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
P LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN
Sbjct: 186 ---PWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVIVCAQSN 241
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LK 503
AVD ++EK+ G+ V+R+ +R ++ + L+ Y+ R + EL +++ ++
Sbjct: 242 TAVDCISEKLVDRGINVLRIGNPTR--INDKM--LSFTYERRFESHPDYPELWSIRKAVR 297
Query: 504 DEQGELSSSDEKKYKALK--------RATEREIS------QSADVICCTCVGAGDPRLAN 549
D Q + ++ ++ RATE E+ A V+ CT VG+ + + N
Sbjct: 298 DIQSNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRIMMN 357
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F + IDE+ QA E C I + A +V+L GDH QL P I C +A R GL ++L ++
Sbjct: 358 RHFTTLFIDEAAQALEAACWIA-ISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQK 416
Query: 610 LVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
+ + + L ++QYRMH + F S FY L++ ++ R +D P +
Sbjct: 417 IAHAKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSE 476
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYEGQR 722
+ + +EE S +NR EA + + + +++ + V+ I G+I+PY+ Q
Sbjct: 477 CDFTENTREE----TMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQV 532
Query: 723 AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
YI + ++ A + L + I V +VD FQG+E+D I++S VR+NE IGFLND RR+N
Sbjct: 533 QYIRKLIKQD-AFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMN 591
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
VA+TRAR ++ILG+ L++ + L +
Sbjct: 592 VAITRARMKLMILGDASTLTRHAFYKELYNY 622
>gi|301310190|ref|ZP_07216129.1| DNA helicase [Bacteroides sp. 20_3]
gi|300831764|gb|EFK62395.1| DNA helicase [Bacteroides sp. 20_3]
Length = 640
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 263/511 (51%), Gaps = 41/511 (8%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 385
++ V + TS+ M A+ + + ++ LLG E Q R P RF
Sbjct: 130 SNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPGQ--RELFPIRF-- 185
Query: 386 PGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
P LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN
Sbjct: 186 ---PWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVIVCAQSN 241
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LK 503
AVD ++EK+ G+ V+R+ +R ++ + L+ Y+ R + EL +++ ++
Sbjct: 242 TAVDCISEKLVDRGINVLRIGNPTR--INDKM--LSFTYERRFESHPDYPELWSIRKAVR 297
Query: 504 DEQGELSSSDEKKYKALK--------RATEREIS------QSADVICCTCVGAGDPRLAN 549
D Q + ++ ++ RATE E+ A V+ CT VG+ + + N
Sbjct: 298 DIQSNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRIMMN 357
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F + IDE+ QA E C I + A +V+L GDH QL P I C +A R GL ++L ++
Sbjct: 358 RHFTTLFIDEAAQALEAACWIA-ISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQK 416
Query: 610 LVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
+ + + L ++QYRMH + F S FY L++ ++ R +D P +
Sbjct: 417 IAHAKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSE 476
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYEGQR 722
+ + +EE S +NR EA + + + +++ + V+ I G+I+PY+ Q
Sbjct: 477 CDFTENTREE----TMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQV 532
Query: 723 AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
YI + ++ A + L + I V +VD FQG+E+D I++S VR+NE IGFLND RR+N
Sbjct: 533 QYIRKLIKQD-AFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMN 591
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
VA+TRAR ++ILG+ L++ + L +
Sbjct: 592 VAITRARMKLMILGDASTLTRHAFYKELYNY 622
>gi|423331731|ref|ZP_17309515.1| hypothetical protein HMPREF1075_01528 [Parabacteroides distasonis
CL03T12C09]
gi|409229572|gb|EKN22444.1| hypothetical protein HMPREF1075_01528 [Parabacteroides distasonis
CL03T12C09]
Length = 640
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 263/511 (51%), Gaps = 41/511 (8%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 385
++ V + TS+ M A+ + + ++ LLG E Q R P RF
Sbjct: 130 SNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPGQ--RELFPIRF-- 185
Query: 386 PGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
P LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN
Sbjct: 186 ---PWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVIVCAQSN 241
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LK 503
AVD ++EK+ G+ V+R+ +R ++ + L+ Y+ R + EL +++ ++
Sbjct: 242 TAVDCISEKLVDRGINVLRIGNPTR--INDKM--LSFTYERRFESHPDYPELWSIRKAIR 297
Query: 504 DEQGELSSSDEKKYKALK--------RATEREIS------QSADVICCTCVGAGDPRLAN 549
D Q + ++ ++ RATE E+ A V+ CT VG+ + + N
Sbjct: 298 DIQSNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMN 357
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F + IDE+ QA E C I + A +V+L GDH QL P I C +A R GL ++L ++
Sbjct: 358 RHFTTLFIDEAAQALEAACWIA-IGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQK 416
Query: 610 LVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
+ + + L ++QYRMH + F S FY L++ ++ R +D P +
Sbjct: 417 IAHTKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSE 476
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVITPYEGQR 722
+ + +EE S +NR EA + + + +++ + V+ I G+I+PY+ Q
Sbjct: 477 CDFTENTREE----TMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQV 532
Query: 723 AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
YI + ++ A + L + I V +VD FQG+E+D I++S VR+NE IGFLND RR+N
Sbjct: 533 QYIRKLIKQD-AFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMN 591
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
VA+TRAR ++ILG+ L++ + L +
Sbjct: 592 VAITRARMKLMILGDASTLTRHAFYKELYNY 622
>gi|294896732|ref|XP_002775704.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239881927|gb|EER07520.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 674
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 258/493 (52%), Gaps = 82/493 (16%)
Query: 390 ELNASQVFAVKSV--LQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
+LN +Q+ AV S + PI+L+QGPPGTGKT T A+V + K +++CAPSN AV
Sbjct: 154 DLNQAQLRAVTSAADVSSPITLVQGPPGTGKTKTIVAMVKALLKT-TNTLVICAPSNAAV 212
Query: 448 DQLAEKISAT---------GLKVVRL--CAK-SREAVSS-PVEHLTLH------YQVRHL 488
D+LA +I A+ +V+R+ C + +RE V + +E L Y++R
Sbjct: 213 DELASRIMASWPPSKSLSDAHQVLRVGSCRRITREEVKTISLEELAKTGGREKVYELRGF 272
Query: 489 DTSEKSE-LHKLQQLKDEQGELSSSDEKKYKALK---RATEREISQSAD----------- 533
++ E L ++++L++ EL+ ++ + KA + A ++E+ + D
Sbjct: 273 HKEKREEILKEIRKLEEGIKELTGDNDSEAKADRGRLVARKKELKEELDKLKQRSSRALS 332
Query: 534 ---------------VICCTCVGAGDPRL-ANFRFRQV--LIDESTQATEPECLIPLVL- 574
V+ T G + +NF R +IDE+ QA EP LIPL L
Sbjct: 333 RSRDEACKHLLGRARVVLGTLSSFGSSTITSNFVARDATCIIDEACQAIEPSALIPLKLR 392
Query: 575 GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFP 634
G K++VLVGD QL ++ +A +SLFERL+ G K L QYRM P ++ F
Sbjct: 393 GVKRLVLVGDPQQLPATVVSMEAKALRYERSLFERLIGAGWKAHLLDEQYRMLPEIANFA 452
Query: 635 SNSFYEGTLQNGVTINERQSSGIDFPWPV--PNRPMFFY-VQMGQEEISASGTSYLNRTE 691
S FY+G L+ + FP + P RP+ F ++G E+ GTS +N E
Sbjct: 453 SKEFYDGRLKTAESCR--------FPSSLGQPLRPLLFLDSRLGSEQ--RGGTSLVNTEE 502
Query: 692 AANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSF 751
A V K+V + +GV+TPY Q I +S +GA EV +VD++
Sbjct: 503 AIIVGKMVEAVANRKL---SVGVVTPYRQQALLIRRTVSMSGA---------EVDTVDAY 550
Query: 752 QGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGL 810
QG+EKD II+SCVRSN GIGF+ D RRLNV+LTRA+Y + I+GN + L + +W L
Sbjct: 551 QGQEKDIIIMSCVRSNRDGGIGFVADYRRLNVSLTRAKYALWIVGNAESLGRSSKVWADL 610
Query: 811 LTHYKEHECLVEG 823
+ + +EHE LV+
Sbjct: 611 IHYCQEHESLVDA 623
>gi|300727419|ref|ZP_07060828.1| DNA helicase [Prevotella bryantii B14]
gi|299775299|gb|EFI71898.1| DNA helicase [Prevotella bryantii B14]
Length = 614
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 243/466 (52%), Gaps = 49/466 (10%)
Query: 383 FGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F P LN SQ AV VL + + ++ GPPGTGKT T + + + QVLVCA
Sbjct: 162 FAPTRFPWLNPSQEKAVNEVLWAKDVEVVHGPPGTGKTTTLVEAINETLMR-ENQVLVCA 220
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD + EK+ G+ V+R+ ++ + L+ Y+ R H D + + K
Sbjct: 221 QSNMAVDWICEKLVDRGINVLRIGNPTK----VNEQMLSFTYERRFEAHPDYPQLWAIRK 276
Query: 499 -LQQLKDEQGELSSSDEKKYKALK-RATEREISQS------ADVICCTCVGAGDPRLANF 550
++QL+ ++ +K + LK RATE EI + A VI T VG+ + L
Sbjct: 277 TIRQLRSQKKGRDDRYHQKLEHLKARATELEIRINTQLFGEARVIASTLVGSANRILEGQ 336
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
+F + IDE+ QA E C IP+ A +V+L GDHCQL P I A +AGL ++L ER+
Sbjct: 337 KFGTLFIDEAAQALEAACWIPM-RRATRVILAGDHCQLPPTIKSLAALKAGLGKTLMERI 395
Query: 611 VLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV---- 663
V KP L+VQYRM+ + +F SN FY G ++ I R +D+ P+
Sbjct: 396 V--ENKPEVVTLLKVQYRMNEQIMQFSSNYFYHGEVETAPQIKYR--GILDYEDPMMWID 451
Query: 664 -------PNRPMFFYVQMGQEEISASGTSYLNRTEAA----NVEKIVTTFLRSGVVPSQI 712
P+ P F +E+ +N+ EA +E+ ++ ++ I
Sbjct: 452 TSEIEVGPDEPSF------KEQFIGENFGRVNKGEAELTLRTLEEYFQKIGKTRILDENI 505
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY Q Y+ + R + K I V +VD FQG+E+D I++S VR+N+
Sbjct: 506 DVGIISPYRAQVQYL-KKLIRKREFFKPYRKFISVNTVDGFQGQERDIILISMVRANDDG 564
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
IGFLND RR+NVA+TRAR ++ILGN + +SK P ++ L + +E
Sbjct: 565 QIGFLNDLRRMNVAITRARMKLIILGNAQTMSKHPFYHQLWNYIQE 610
>gi|390444674|ref|ZP_10232447.1| ATPase AAA [Nitritalea halalkaliphila LW7]
gi|389664177|gb|EIM75683.1| ATPase AAA [Nitritalea halalkaliphila LW7]
Length = 601
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 172/563 (30%), Positives = 274/563 (48%), Gaps = 69/563 (12%)
Query: 298 SVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSV 357
S+ VI +E++A+ L + ++ VD ++ S+ M+ AM+ +
Sbjct: 49 SLNGVINYVRKEKMAITLNVDEVPQWLLHEKIGVDLLFDEASYRHMESAMRRVIKAKGDR 108
Query: 358 SGYIYHHLLGHEVEVQMVRNTLPRRFG------APGLPELNASQVFAVKSVLQ-RPISLI 410
+ + LLG + P RF AP LN Q A + + Q ++L+
Sbjct: 109 TAELKEVLLGAQ----------PARFSPHATLIAPN-RALNPPQEKACQLIQQAEDVALV 157
Query: 411 QGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSRE 470
GPPGTGKT T + A QVLVCAPSN AVD L E++ GL+V+RL +R
Sbjct: 158 HGPPGTGKTSTLVQAIL-TASYTYPQVLVCAPSNAAVDLLTERLGEAGLEVLRLGHPAR- 215
Query: 471 AVSSPVEHLTLHYQVRHLDTSEKSEL--HKLQQLKDEQGEL-----SSSDEKKYKALKRA 523
+ +P+ TL ++ D+ ++ +L K + L+ + G+ ++ + AL+ A
Sbjct: 216 -IDAPIIASTLDARIAAHDSYKELKLLRKKAEALRKQAGKYKRNFGAAERAARNHALQEA 274
Query: 524 -------------TEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLI 570
++ Q A VI CT VGA +L +RF V IDE+ Q EP I
Sbjct: 275 RMLKENARHLEDYIHYDVFQRAQVIACTLVGAASAQLDGYRFPLVFIDEAAQGLEPATWI 334
Query: 571 PLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP---IRLQVQYRMH 627
P +L A +VV+ GDHCQL P I +A RAGL+++LFE+++ +P + L+VQYRM
Sbjct: 335 P-ILRADRVVMAGDHCQLPPTIKSFEAGRAGLSRTLFEKVI--QRQPEAAVMLEVQYRMP 391
Query: 628 PSLSEFPSNSFYEGTLQNG-VTINERQSSGIDFPWPVPNRPMFFYVQMG----QEEISAS 682
+ F + +FY+G LQ +T R PN P+ ++ E
Sbjct: 392 EVIMRFSAQTFYKGKLQAAPITETHRLH---------PNEPILEFIDTAGTGFLEHKEKD 442
Query: 683 GTSYLNRTEAANVEKIVTTFLRS---GVVPSQ---IGVITPYEGQRAYIVNYMSRNGAL- 735
S LN EA + + + +R G + + IG+I PY Q + +++
Sbjct: 443 SLSTLNEREAVALLRYLEQCIRRLGIGHMKQEGWNIGLIAPYSAQVRALRHHIFETFQFP 502
Query: 736 -RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 794
+ + + V S+D FQG+E+D + +S VR+NE IGFL+D RR+NVALTRA+ +++
Sbjct: 503 NLKAFSELLTVNSIDGFQGQERDIMAISLVRANETGEIGFLSDIRRMNVALTRAKRKLIV 562
Query: 795 LGNPKVLSKQPLWNGLLTHYKEH 817
+G+ LS P + + + H
Sbjct: 563 MGDSATLSHHPFYADFIDYVDRH 585
>gi|38175739|dbj|BAC83245.2| regulator of nonsense transcripts 1 homolog -like protein [Oryza
sativa Japonica Group]
gi|50509202|dbj|BAD30406.1| regulator of nonsense transcripts 1 homolog -like protein [Oryza
sativa Japonica Group]
Length = 303
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 144/210 (68%), Gaps = 28/210 (13%)
Query: 832 MVQFQKPKKIYNDRRLFFGAGPGIVPN---DISTSNPNADRRGSRARG--YMPPGPPNGT 886
MVQFQKPKKIYNDRRLF G G G++ + +NP AD+R R +G ++P GPPNG
Sbjct: 1 MVQFQKPKKIYNDRRLFLGGGQGVMQGASFGAAGTNPVADKRSGRGKGHSFVPFGPPNGA 60
Query: 887 HKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRG 946
HKPG+HP+G+P+PR+P PPF G SQPYAIP+RG++HGP+GAV VP PG+R FG RG
Sbjct: 61 HKPGVHPSGYPLPRMPFPPFAGAH-SQPYAIPTRGSLHGPIGAVPPVPQPGNRNFGP-RG 118
Query: 947 SAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQPGFVNNMPVQGPS 1006
+ G PIG HL HQQ++QQ +G +GS FNFP LEN +SQPS GGP++Q
Sbjct: 119 NTGGPIGGHLAHQQSSQQAMGGMGSAFNFPGLENPSSQPSGGGPMSQ------------- 165
Query: 1007 QTFRDGFSVGSMSQDFLGDDFKSQGSHVCL 1036
G M+QDF GDDFKSQGSHV
Sbjct: 166 --------TGLMTQDFFGDDFKSQGSHVAY 187
>gi|357060587|ref|ZP_09121355.1| hypothetical protein HMPREF9332_00912 [Alloprevotella rava F0323]
gi|355375892|gb|EHG23160.1| hypothetical protein HMPREF9332_00912 [Alloprevotella rava F0323]
Length = 640
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 238/450 (52%), Gaps = 36/450 (8%)
Query: 387 GLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 445
LP LNASQ AV VL R + ++ GPPGTGKT T + + ++ + QV+VCA SN+
Sbjct: 178 NLPWLNASQEQAVNDVLAARDLMIVHGPPGTGKTTTLVEAIMEVMRR-EPQVMVCAQSNM 236
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK-LQQ 501
AVD ++E+++ G+ V+R+ SR V+ + L+ Y+ R H D S + + ++Q
Sbjct: 237 AVDWISEQLADRGVSVLRIGNPSR--VTDKM--LSFTYERRFESHPDYSTLWSIRRTIRQ 292
Query: 502 LKD--EQGELSSSDEKKYKALKRATEREIS------QSADVICCTCVGAGDPRLANFRFR 553
L +G S +K + +RA E E+ + V+ CT VG+ + L F
Sbjct: 293 LYATPRKGRSESFHQKITRLRERADELELRIRNALFDQSRVVACTLVGSANQLLQGIHFH 352
Query: 554 QVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
+ IDE+ QA EP C I L + VL GDHCQL P I A GL ++L E L
Sbjct: 353 TLFIDEAAQALEPACWIAL-RKCDRFVLAGDHCQLPPTIKSNAARYGGLDKTLMETLAET 411
Query: 614 GLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI--DFPWPVPNRPMFF 670
+ +RL VQYRM+ +L F S FYEG LQ ++ R GI D P+
Sbjct: 412 HPEAVRLLTVQYRMNEALMRFSSEWFYEGKLQAAPEVSHR---GIMADMDEPLVWVDTAG 468
Query: 671 YVQMGQEEISAS--GTSY--LNRTEA----ANVEKIVTTFLRSGVVPSQI--GVITPYEG 720
GQE+ G SY +N+ EA A + R ++ +I G+I+PY+
Sbjct: 469 EDSEGQEDFHEQFIGASYGRINKAEARLTLATLIDYTERIGRQRLLEERIDIGIISPYKA 528
Query: 721 QRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
Q Y+ + +N LR L K I + +VD+FQG+E+D I++S VR+NE IGFLND RR
Sbjct: 529 QVQYLRALLKKNAYLRP-LRKSITINTVDAFQGQERDVILVSLVRANETGEIGFLNDLRR 587
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGL 810
+NVA+TRAR ++ILG L + + L
Sbjct: 588 MNVAITRARMKLIILGASTTLCRHKFYKKL 617
>gi|317475492|ref|ZP_07934755.1| hypothetical protein HMPREF1016_01737 [Bacteroides eggerthii
1_2_48FAA]
gi|316908323|gb|EFV30014.1| hypothetical protein HMPREF1016_01737 [Bacteroides eggerthii
1_2_48FAA]
Length = 633
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 240/467 (51%), Gaps = 45/467 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 181 RELYPVRF-----PWLNSTQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHR-E 234
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN+AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 235 PQVLVCAQSNMAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFENHPLYP 290
Query: 495 ELHKLQQLKDEQG---ELSSSDEK------------KYKALKRATEREISQSADVICCTC 539
EL +++ + G S DE+ + AL+ E+ SA VI T
Sbjct: 291 ELWSIRKELRQLGGRARRGSYDEREGIRSRMSRLRDRATALEVQINTELFDSAHVIASTL 350
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L F + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 351 VSSNHRLLNGRHFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAAR 409
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL ++L E++ + L +VQYRMH + F SN FY+G L+ I R D
Sbjct: 410 GGLERTLMEKVAASKPSAVSLLKVQYRMHEDIMRFSSNWFYDGELEAAPEIRHRGILDWD 469
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF-LRSG---VVPSQI 712
P W + M F +EE +N+ EA + K + + LR G ++ +I
Sbjct: 470 TPVTW-IDTSDMDF-----KEEFVGETFGRINKEEAHLLLKELEAYILRIGGSRILEERI 523
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEH 769
G+I+PY+ Q Y+ + + LR Y+ I V +VD FQG+E+D I +S VR+NE
Sbjct: 524 DFGLISPYKAQVQYLRGKIKGSATLRP--YRSLITVNTVDGFQGQERDVIFISLVRANEE 581
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
IGFLND RR+NVA+TRAR +VILG L + LL + K+
Sbjct: 582 GQIGFLNDLRRMNVAITRARMKLVILGEAATLGHHAFYKQLLEYVKK 628
>gi|242048802|ref|XP_002462147.1| hypothetical protein SORBIDRAFT_02g020475 [Sorghum bicolor]
gi|241925524|gb|EER98668.1| hypothetical protein SORBIDRAFT_02g020475 [Sorghum bicolor]
Length = 862
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 243/461 (52%), Gaps = 53/461 (11%)
Query: 394 SQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEK 453
S+ A+ +RP+ +IQGPPGTGKT + ++ +A++G+ +VLV APSN A+D + E
Sbjct: 397 SRALALALDKERPVLVIQGPPGTGKTRLLSYLITCVARRGE-RVLVTAPSNAAIDNIVES 455
Query: 454 ISATGLKVVRLCAKSR-----------EAVSSPVEHLTLHYQVRHLDTSEKSELHK-LQQ 501
+S +GLK+VR+ SR E V+ +E T ++ +K L K L++
Sbjct: 456 LSRSGLKIVRVGNPSRISPSVTSMSLGEIVTKRLEKFTQEFE------RKKYALRKDLKR 509
Query: 502 LKDEQGELSSSDE-------KKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FR 553
+ L+S K YK ++ RE+ +A+V+ T GA DP + F
Sbjct: 510 CIQDDDSLASGIRQRLKKLGKDYKKEEKEAIREVLSNAEVVLSTNTGAADPLIRGMGCFD 569
Query: 554 QVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
V+IDE+ QATEP C IP++ G K+ +L GDH QL PVI+ ++A GL SL ER L
Sbjct: 570 LVIIDEAGQATEPSCWIPILQG-KRCILAGDHRQLAPVILSREAMEGGLGISLLERASSL 628
Query: 614 --GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP--------- 662
GL L QYRMH S++ + S Y+G LQ+ + R +D+P+
Sbjct: 629 HDGLLTTTLTTQYRMHESIASWASKEMYDGLLQSFPPVASRLL--VDYPFVKATWMTQCA 686
Query: 663 ---VPNRPMFFYVQMGQEE-ISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
+ R + + + EE + +GT S+ N EA V + V ++ GV P+ I V +P
Sbjct: 687 LLLLDTRKEYGSLNIDCEESLDLAGTGSFYNNGEADIVAQHVFNLIQCGVPPTSIVVQSP 746
Query: 718 YEGQRAYIVNYMSRNGALRQQ-LYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
Y Q + G L + + +EV+++DSFQGRE D +++S VRSN +GFL
Sbjct: 747 YIAQVQLL------RGRLEEYPVASNVEVSTIDSFQGREADAVVISMVRSNSLGAVGFLG 800
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
D RR+NVA+TRAR + ++ + + LL H ++H
Sbjct: 801 DIRRMNVAITRARSHVAVVCDTSTICNNAFLARLLRHIRQH 841
>gi|282859892|ref|ZP_06268980.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|424899896|ref|ZP_18323438.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
gi|282587295|gb|EFB92512.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|388592096|gb|EIM32335.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
Length = 637
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 244/461 (52%), Gaps = 45/461 (9%)
Query: 383 FGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F A LP LN +Q AV VL + ++++ GPPGTGKT T + + + QVLVCA
Sbjct: 186 FNALKLPWLNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMR-ENQVLVCA 244
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+A+D ++EK+ G+ V+R+ +R V+ + L Y+ R H D + L K
Sbjct: 245 QSNMAIDWISEKLVDRGINVLRIGNPTR--VNDKM--LGFTYERRFEAHSDYPQLWSLRK 300
Query: 499 -LQQLKDEQGE-LSSSDEKKYKALKRATEREIS------QSADVICCTCVGAGDPRLANF 550
++QL+ + L EK + RATE EI A V+ CT V A +
Sbjct: 301 AIRQLRSNRKRGLERFHEKLDRLKSRATELEIRINSELFSEARVVACTLVSANSRIMEGQ 360
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
+F + IDE+ QA E C IP + A +VV GDHCQL P I A RAGL ++L ER+
Sbjct: 361 KFDTLFIDEAAQALEAACWIP-IRRASRVVFAGDHCQLPPTIKNIAAMRAGLGKTLMERI 419
Query: 611 VLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--WPVPN 665
V KP L+VQYRM+ + F S+ FY G +++ I R D P W +
Sbjct: 420 V--ENKPEVVTLLKVQYRMNEEIMRFSSDWFYHGEVESAPQIRYRSILDYDHPMLWLDTS 477
Query: 666 RPMFFYVQMGQEEISAS----GTSY--LNRTEAA----NVEKIVTTFLRSGVVPSQI--G 713
+ V +G +E+S G S+ +N+ EA ++++ T + ++ I G
Sbjct: 478 K-----VDIGDDEVSFKEEFVGESFGRINKGEAELTLNSLQEYFTKIGKQRILDESIDVG 532
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGI 772
VI+PY Q Y+ + + + Y+ I V +VD FQG+E+D I++S VR+N+ I
Sbjct: 533 VISPYRAQVQYLRKLIRKRKFFKP--YRHLITVNTVDGFQGQERDVILISMVRANDEGQI 590
Query: 773 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
GFL D RR+NVA+TRAR ++ILGN + ++K P + L +
Sbjct: 591 GFLKDLRRMNVAITRARMKLIILGNAETMTKHPFYAKLYEY 631
>gi|150004508|ref|YP_001299252.1| helicase [Bacteroides vulgatus ATCC 8482]
gi|149932932|gb|ABR39630.1| putative helicase [Bacteroides vulgatus ATCC 8482]
Length = 630
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 241/459 (52%), Gaps = 46/459 (10%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
FG P LN +Q AV V+ + ++++ GPPGTGKT T +Y + + QV+VCA
Sbjct: 184 FGFTRFPWLNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCA 242
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV----EHLTLHYQVR---HLDTSEKS 494
SN+AVD ++EK+ G+ V+R + +P+ + L Y+ R H D +
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLR--------IGNPIRVNDKMLAFTYERRFESHPDYPQLW 294
Query: 495 ELHK-LQQL--KDEQGELSSSDEKKYKALK-RATEREISQS------ADVICCTCVGAGD 544
+ K +++L + +G + +K +LK RATE EI + A VI CT V + +
Sbjct: 295 SIRKAIRELYGRSRKGAERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSAN 354
Query: 545 PRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
L +F + IDE+ QA EP C I + A +V+L GD+CQL P I C +AAR GL +
Sbjct: 355 RILTGRKFSTLFIDEAAQALEPACWIA-IRKADRVILAGDYCQLPPTIKCMEAARGGLDR 413
Query: 605 SLFERLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
+L + + KP L+VQYRM+ + F S FY+G L++ + R D P
Sbjct: 414 TLMQEIA--DNKPDTVSLLKVQYRMNDEIMRFSSEWFYQGELKSAPEVKYRSILDYDTPI 471
Query: 662 PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI--GVI 715
N EE +N+ EAA +T ++ + + +I G+I
Sbjct: 472 EWINTEGM----ECNEEFVGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLI 527
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
+PY+ Q Y+ + R+ + Y+ I + +VD FQG+E+D I++S VR+NE IGF
Sbjct: 528 SPYKAQVQYLRQLIKRDAFFKP--YRHLITINTVDGFQGQERDVILISLVRANEEGQIGF 585
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
LND RR+NVA+TRAR ++ILG+ L+K P + L +
Sbjct: 586 LNDLRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|392964636|ref|ZP_10330056.1| AAA ATPase [Fibrisoma limi BUZ 3]
gi|387846019|emb|CCH52102.1| AAA ATPase [Fibrisoma limi BUZ 3]
Length = 632
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 257/523 (49%), Gaps = 64/523 (12%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
V+ ++ S+D M+ A+KT + + + L G + T L
Sbjct: 122 LGVELLFDDNSYDEMEQALKTASTLSRKSDHRLINILTGEQ------SPTFRSEVAELSL 175
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P+LN SQV AV + ++++ GPPGTGKT T + + +Q +VLV APSN AV
Sbjct: 176 PQLNPSQVAAVDKIRSANELAIVHGPPGTGKTTTIVQAIKALIRQANQKVLVVAPSNTAV 235
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQG 507
D L+E++ GL V+R+ +R VS + LTL ++V +E + + ++LK +
Sbjct: 236 DLLSERLHDQGLNVLRVGNPAR--VSERLMALTLDHKV-----NEHPYMKEAKKLKKQAN 288
Query: 508 ELSSSDEKKYKALKRATEREISQS--------------------------ADVICCTCVG 541
E + K + +A ERE ++ A VI T VG
Sbjct: 289 EFRNMAHKYKRQFGKA-EREQRKALFDEAHRIMKDVANSEQYVIDDLIARAQVITATLVG 347
Query: 542 AGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
A + N + V+IDE+ QA EP C IP +L A++VVL GDHCQL P I +AAR G
Sbjct: 348 ANHHTVRNLTYHTVVIDEAGQALEPACWIP-ILKAQKVVLAGDHCQLPPTIKSPEAARRG 406
Query: 602 LAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
L+++L E+ + + + + L QYRMH + + S FYE L+ ++ D
Sbjct: 407 LSETLLEKCIAMHPEAVSLLDEQYRMHEHIMGYSSEVFYEKKLKAHASVARHTLFDGD-- 464
Query: 661 WPVPNRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVT-------TFLRSGVVPS 710
+ F G E++ GTS N EAA + K +T T+ + P+
Sbjct: 465 -----TSLVFVDTAGCGFDEKLD--GTSSTNPDEAALLVKHLTQLVADLSTYYKPQDFPT 517
Query: 711 QIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
I VI+PY+ Q A + ++ L Q I V ++DSFQG+E+D + +S VRSN
Sbjct: 518 -IAVISPYKQQIAILKEQIANTPEL-QPYSHVISVNTIDSFQGQERDIVYISMVRSNADG 575
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
IGFL D RR+NVA+TRAR +VI+G+ L+ P + + +
Sbjct: 576 DIGFLADIRRMNVAMTRARKKLVIVGDSATLAGLPFYADFIAY 618
>gi|395218587|ref|ZP_10402229.1| ATPase AAA [Pontibacter sp. BAB1700]
gi|394454278|gb|EJF08968.1| ATPase AAA [Pontibacter sp. BAB1700]
Length = 645
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 244/483 (50%), Gaps = 70/483 (14%)
Query: 380 PRRFGAPGLPE---LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQG 435
P F L E LN SQ AV+ + Q R +++I GPPGTGKT T + H K Q
Sbjct: 166 PATFTDEKLEEIQVLNESQNEAVQKIAQARDVAIIHGPPGTGKTTTLVQAILHTLK-SQK 224
Query: 436 QVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSE 495
++LV APSN AVD L EK++ G+ V+R+ SR VS + TL QV + +
Sbjct: 225 RLLVTAPSNTAVDLLTEKLANEGVNVIRIGNPSR--VSDVLLEHTLDAQV--MAHRAYKD 280
Query: 496 LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQS--------AD-------------- 533
L L++ +E ++ ++K+ +RA +R++ +S AD
Sbjct: 281 LKNLRKTAEEYKRMAYQFKRKFGHQERA-QRQLYKSESHRLLDEADNVEHYITDDLLDNV 339
Query: 534 -VICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVI 592
VI CT VGA + + + + V IDE+ QA EP C IP + +VVL GDHCQL P I
Sbjct: 340 QVITCTLVGAANKAIRHLTYDTVFIDEAAQALEPACWIP-ISRTNRVVLAGDHCQLPPTI 398
Query: 593 MCKKAARAGLAQSLFERLVLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 649
A + GL+ +LFE+ + +P + L+ QYRMH + +F + FY G L ++
Sbjct: 399 KSLVADKGGLSVTLFEKCI--NRQPEVSVMLKTQYRMHHHIMQFSNQQFYGGELVAHESV 456
Query: 650 NERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTE------AANVEK------ 697
+ + G F M E I +G Y N E +AN E+
Sbjct: 457 HSAELHGY---------STIFAPDMAVEFIDTAGCGY-NEAEMPETQSSANPEEGDLLIN 506
Query: 698 ----IVTTFLRSGVVPSQIGVITPYEGQRAYI---VNYMSRNGALRQQLYKEIEVASVDS 750
++ + V P +IGVI PY Q Y+ V + R L Q+ +++ + +VDS
Sbjct: 507 HLSNLLKDYDEEEVAPLKIGVIAPYRAQINYLQDKVEHTPRLHELHQK--RQLSIGTVDS 564
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
FQG+E+D I +S VRSNE IGFL D RR+NVA+TRAR ++I+G+ LS P + L
Sbjct: 565 FQGQERDIICMSLVRSNERGEIGFLADERRMNVAMTRARRKLIIVGDSSTLSTNPFFAEL 624
Query: 811 LTH 813
+ +
Sbjct: 625 IAY 627
>gi|423302630|ref|ZP_17280652.1| hypothetical protein HMPREF1057_03793 [Bacteroides finegoldii
CL09T03C10]
gi|408470506|gb|EKJ89040.1| hypothetical protein HMPREF1057_03793 [Bacteroides finegoldii
CL09T03C10]
Length = 628
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 241/468 (51%), Gaps = 43/468 (9%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R +S++ GPPGTGKT T +Y + +
Sbjct: 179 RELYPVRF-----PWLNSTQETAVNKVLCARDVSIVHGPPGTGKTTTLVEAIYETLHR-E 232
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QV+VC SN AVD + EK+ G+ V+R+ +R V+ + L+ Y+ R
Sbjct: 233 PQVMVCTQSNTAVDWICEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFESHPAYP 288
Query: 495 ELHKLQQLKDEQG---------ELSSSDEKKYKALKRATEREISQSAD------VICCTC 539
EL +++ E G E + + RATE EI +AD VI T
Sbjct: 289 ELWGIRKSIREMGGRMRRGSYEEREGMRSRMSRLRDRATELEIQINADLFDSARVIASTL 348
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + +VVL GDHCQL P I C +AAR
Sbjct: 349 VSSNHRLLNGRRFPTLFIDEAAQALEAACWIA-IRKTDRVVLAGDHCQLPPTIKCIEAAR 407
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++V + L +VQYRM+ ++ +FPS+ FY+G L+ + R D
Sbjct: 408 GGLEYTLMEKVVRQKPSSVSLLKVQYRMNEAIMQFPSDWFYQGELEAAPEVRYRGILDFD 467
Query: 659 FP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL----RSGVVPSQI 712
P W + M F+ EE +N+ EA + + + ++ + ++ +I
Sbjct: 468 SPMSW-IDTSEMEFH-----EEFIGESFGRINKQEANLLLEELEAYINRIGKERILEERI 521
Query: 713 --GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+I+PY+ Q Y+ + + + LR L I V +VD FQG+E+D + +S VR+NE
Sbjct: 522 DFGLISPYKAQVQYLRSKIKGSSFLRP-LRSLITVNTVDGFQGQERDVVFISLVRANEEG 580
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFLND RR+NVA+TRAR +VILG L+K P + L+ K+ +
Sbjct: 581 QIGFLNDLRRMNVAITRARMKLVILGEAATLTKHPFYKRLMAFIKKED 628
>gi|329961517|ref|ZP_08299598.1| putative DNA helicase [Bacteroides fluxus YIT 12057]
gi|328531729|gb|EGF58558.1| putative DNA helicase [Bacteroides fluxus YIT 12057]
Length = 627
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 242/466 (51%), Gaps = 49/466 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 179 RELYPVRF-----PWLNSTQETAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 232
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 233 PQVLVCAQSNTAVDWISEKLIDRGVNVLRIGNPTR--VNDKM--LSFTYERRFEGHPLYT 288
Query: 495 ELHKLQQ-LKDEQGELSSSDEKKYKALK--------RATEREISQSAD------VICCTC 539
EL +++ L++ G + + + ++ RAT EI +AD VI T
Sbjct: 289 ELWSIRKNLRELSGRSRRGNYDEREGIRNRMSRLRDRATALEIQINADLFDGAHVIASTL 348
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 349 VSSNHRLLNGHRFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCHEAAR 407
Query: 600 AGLAQSLFERLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
GL ++L E++V KP L+VQYRMH + +F S FY G L+ + R
Sbjct: 408 GGLERTLMEKVV--SSKPSTVSLLKVQYRMHEDIMKFSSQWFYNGELEAAPEVRCRGILD 465
Query: 657 IDFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPS 710
D P W + M F +EE +N+ EA ++ +T + ++
Sbjct: 466 WDSPISW-IDTSDMDF-----KEEFVGETFGRINKDEANLLLQELKSYITRIGSNRILEE 519
Query: 711 QI--GVITPYEGQRAYIVNYMSRNGALRQQLYKEI-EVASVDSFQGREKDYIILSCVRSN 767
+I G+I+PY Q Y+ N + + +L+ Y+ + V +VD FQG+E+D I +S VR+N
Sbjct: 520 RIDFGIISPYRAQVQYLRNKIKTDASLKP--YRSLLTVNTVDGFQGQERDVIFISLVRAN 577
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
E IGFLND RR+NVA+TRAR +VILG LS + L+ +
Sbjct: 578 EEGQIGFLNDLRRMNVAITRARMKLVILGEAATLSHHSFYRKLMEY 623
>gi|270295956|ref|ZP_06202156.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273360|gb|EFA19222.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 637
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 239/464 (51%), Gaps = 49/464 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 186 RELYPVRF-----PWLNSTQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHR-E 239
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 240 PQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFENHPLYP 295
Query: 495 ELHKLQQLKDEQGELS---SSDEK------------KYKALKRATEREISQSADVICCTC 539
EL +++ E G + S DE+ + AL+ E+ A VI T
Sbjct: 296 ELWSIRKNLRELGSRARRGSYDEREGVRSRMSRLRDRATALEIQINSELFDGAHVIASTL 355
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 356 VSSNHRLLNGRRFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAAR 414
Query: 600 AGLAQSLFERLVLLGLKPI---RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
GL ++L E++V KP L+VQYRMH + +FPS FY G L+ + R
Sbjct: 415 GGLERTLMEKVV--SNKPAVVSLLKVQYRMHEEIMKFPSQWFYNGELEAAPEVRYRGILD 472
Query: 657 IDFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPS 710
D P W + M F +EE +N+ EA + ++ + + ++
Sbjct: 473 WDTPIHW-IDTSEMDF-----KEEFVGETFGRINKAEADLLLSELKIYINRISGNRILEE 526
Query: 711 QI--GVITPYEGQRAYIVNYMSRNGALRQQLYKEI-EVASVDSFQGREKDYIILSCVRSN 767
+I G+I+PY+ Q Y+ N + + +L+ Y+ + V +VD FQG+E+D I +S VR+N
Sbjct: 527 KIDFGIISPYKAQVQYLRNKIKADASLKP--YRSLFTVNTVDGFQGQERDVIFISLVRAN 584
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
E IGFLND RR+NVA+TRAR +VI+G L + LL
Sbjct: 585 EEGQIGFLNDLRRMNVAITRARMKLVIMGEADTLKHHGFYRKLL 628
>gi|294506246|ref|YP_003570304.1| DNA helicase [Salinibacter ruber M8]
gi|294342574|emb|CBH23352.1| Putative DNA helicase [Salinibacter ruber M8]
Length = 766
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 241/497 (48%), Gaps = 85/497 (17%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN +Q AV K+V + LI GPPGTGKT T+ ++ +G+ VL A SN AVD
Sbjct: 276 LNDAQRRAVRKAVATDDVHLIHGPPGTGKTTTATEVLQQCVDRGES-VLATAASNTAVDN 334
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLK--DEQG 507
+ ++ G VVRL +R V+ + TL Q+ DT +S+ + + D Q
Sbjct: 335 VVAFLAEQGTDVVRLGHPAR--VNDRLRTHTLDAQIEDTDTHRRSQQKREKAFAVLDRQE 392
Query: 508 ELSS---------SDEK-------------------------------------KYKALK 521
+L++ SD K + +AL+
Sbjct: 393 DLTAPSGRWRRGMSDRKIKERAEQGRGSRGVPPERIEEMAAWLALQERADALFDEAEALE 452
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
+ E+ ++ADV+C T AG L F ++IDE+TQAT P C IP+ A++ VL
Sbjct: 453 QEAIDEVLRAADVVCSTNSTAGSDLLDGHTFDTLVIDEATQATAPSCWIPMT-HARRAVL 511
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLV--------LLGLKPIRLQVQYRMHPSLSEF 633
VGDH QL P I ++AAR GL ++LFERL G L+ QYRMH ++ F
Sbjct: 512 VGDHKQLPPTIQNQEAARRGLRRTLFERLAHHHETAPESPGSIRSLLRRQYRMHETIMGF 571
Query: 634 PSNSFYEGTLQNGVTINERQSSGIDFP---WPV--------PNRPMFFYVQMGQE--EIS 680
P+ +FY+G L+ T R +G+ P P P P+ F G + E
Sbjct: 572 PNRTFYDGRLEADDTARHRTLAGLGVPEHALPADERRAILDPEAPLVFVDTSGIDAPEHQ 631
Query: 681 ASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 739
SG+ S N EA + ++ T L +G+ PS I VI+PY+ Q I ++ +G
Sbjct: 632 RSGSHSRENPREADLIAQLTTALLEAGMAPSAIAVISPYDDQVDRIDRALAPDGP----- 686
Query: 740 YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 799
E +VD FQGREK+ ++LS VRSN+ IGFL++PRR NVA+TRA V++G+
Sbjct: 687 ----ETDTVDGFQGREKEIVLLSLVRSNDRGAIGFLDEPRRFNVAVTRAERKAVVVGDAS 742
Query: 800 VLSKQPLWNGLLTHYKE 816
++ + G Y E
Sbjct: 743 TVAAADVL-GAFVRYAE 758
>gi|357509763|ref|XP_003625170.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355500185|gb|AES81388.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 645
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 146/446 (32%), Positives = 232/446 (52%), Gaps = 26/446 (5%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ K++ + + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 195 LDYSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 253
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELHKL--QQLKD 504
+ E++ +K+VR+ +R + V S ++ L L + E+ L + LK
Sbjct: 254 IVERLVPHRVKLVRIGHPARLLPQVVDSALDAQVLRGDNSGLANDIRKEMKVLNGKLLKT 313
Query: 505 EQGELSSSDEKKYKALKRATER-------EISQSADVICCTCVGAGDPRLANFRFRQVLI 557
++ +K+ + L R + ++ +++DVI T +GA +L N F V+I
Sbjct: 314 KEKNTRREIQKELRTLSREERKRQQLAVTDVIKTSDVILTTLIGASSKKLGNTSFDLVII 373
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP 617
DE+ QA E C IPL+ G + +L GDH QL P I +A + GL ++LFERL L
Sbjct: 374 DEAAQALEVACWIPLLKGTR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAELYGDE 432
Query: 618 I--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID-FPWPVPNRPMFFYVQM 674
+ L VQYRMH + ++ S Y ++ + ++ P +
Sbjct: 433 VTSMLTVQYRMHQLIMDWSSKELYNSKVKAHACVASHMLYDLEGVKKTSSTEPTLLLIDT 492
Query: 675 G---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSR 731
EE S LN E+ ++SGV+PS IG+ITPY Q ++ M +
Sbjct: 493 AGCDMEEKKDEEDSTLNEGESEVAMAHAKRLVQSGVLPSDIGIITPYAAQ--VVLLKMLK 550
Query: 732 NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 791
N ++ K+IE+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 551 N---KENSLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 607
Query: 792 IVILGNPKVLSKQPLWNGLLTHYKEH 817
I+ + + +S L+ +++EH
Sbjct: 608 CCIVCDTETVSSDGFLKRLIEYFEEH 633
>gi|145514990|ref|XP_001443400.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410778|emb|CAK76003.1| unnamed protein product [Paramecium tetraurelia]
Length = 1068
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 166/538 (30%), Positives = 269/538 (50%), Gaps = 91/538 (16%)
Query: 363 HHLLGHEV--------EVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRP--ISLIQG 412
HLLG E+ Q+ + +F + N SQ ++K +LQ+ ISL+QG
Sbjct: 498 QHLLGTEIGGSWTAQFRNQVSNSEYLTKFFKLVDQKFNKSQANSIKEILQQEKGISLLQG 557
Query: 413 PPGTGKTVTSAAIV---YHMAKQG----QGQVLVCAPSNVAVDQLAEKI-------SATG 458
PPGTGKT T I+ Y K + ++L+CAPSN A+D++ +I + G
Sbjct: 558 PPGTGKTHTLIGILSGAYEYMKMTDKFPRKKILICAPSNAAIDEIILRIMRPDSLFDSDG 617
Query: 459 ----LKVVRLCAKSREA-VSSPVEHLTLHY---------QVRHLDTSEKS------ELHK 498
+KV+R+ E+ S V+ ++L Y Q+ + +K+ ++ K
Sbjct: 618 KPREVKVIRIGLIDEESEFSDTVKKVSLEYLAQNMLLKSQIIKQEADQKTTADLRIDICK 677
Query: 499 LQ----------------------QLKDEQGELSSSDEKKYKALKRATEREISQS----- 531
+Q QL + + +LS +++Y RA + + +S
Sbjct: 678 IQNQIKKLQKIKKQDLTDQSTYSEQLSNLKSDLSI--KQQYLERMRAKKIQYKESYNLFC 735
Query: 532 ------ADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVG 583
A++IC T +G +L+ + + +++DE+ Q TEP +IPL LG ++++L+G
Sbjct: 736 EKILNEAEIICSTLNSSGSEKLSKYMDQIELLIVDEAAQCTEPSNIIPLRLGVEKMILIG 795
Query: 584 DHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTL 643
D QL + +SLFER++ +P L +QYRM + +FPS FY+ L
Sbjct: 796 DPKQLAATTFSPSSTTGFYNRSLFERILDNNFQPHFLNIQYRMDSEIRKFPSFEFYQNKL 855
Query: 644 QNGVTINERQSSGIDFPWPVPNRPMFFY-VQMGQEEISASGTSYLNRTEAANVEKIVTTF 702
+ ++ +R+ P + M F + GQE+ TSY+N EA V +++ +
Sbjct: 856 IDHESVIQRK-----LPENYFKKQMLFLDIIDGQEK--RDNTSYINEKEANLVIQLINS- 907
Query: 703 LRSGVVPSQIGVITPYEGQRAYIVNYMSR-NGALRQQLYKEIEVASVDSFQGREKDYIIL 761
++ IGVI+ Y+ Q I + + N L+ K + V +VDSFQG+EKD II
Sbjct: 908 IKEQFKTQTIGVISSYKAQVKLIQTLIKQSNTRLKDIDNKILSVNTVDSFQGQEKDIIIF 967
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHEC 819
SCVRS+E +GIGFLND RR+NVALTRA++ + ++GN LSK LW LL + +E +
Sbjct: 968 SCVRSSECKGIGFLNDGRRINVALTRAKFALFVIGNGLTLSKGQLWRNLLQNMQERQL 1025
>gi|260950507|ref|XP_002619550.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
gi|238847122|gb|EEQ36586.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
Length = 1970
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 258/527 (48%), Gaps = 108/527 (20%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV----------------------Y 427
+N SQ A+ Q SLIQGPPGTGKT T IV +
Sbjct: 1256 VNKSQAKAILGSFQNNGFSLIQGPPGTGKTKTILGIVGNTLSHSKKSNVIEVPGVTSSDH 1315
Query: 428 HMAKQGQGQVLVCAPSNVAVDQLAEKI-----SATGL----KVVRLCAKSREAVSSPVEH 478
H K+ +VL+CAPSN AVD+L ++ +A G K+VRL +A++S V
Sbjct: 1316 HSDKEQGPKVLICAPSNAAVDELVVRLRQGVHNAKGEEMIPKIVRLGRS--DAINSSVRD 1373
Query: 479 LTLHYQVRH----------LDTSEKSELHKLQQLKDE------QGELSSSDEKKYKAL-- 520
L L Q+ +D + ++E +K +DE +G+L D++K AL
Sbjct: 1374 LGLEEQIEKQLKVRNISVVIDPNIRTEHNKCIAERDEIREKLRRGDL---DDEKIAALET 1430
Query: 521 ---------------------------------KRATEREISQSADVICCTCVGAGDPRL 547
KR + +I A VIC T G+ L
Sbjct: 1431 QLREINKKRSELGKRLDEQRENASIAYRTKEIEKRQLQAKILSEAQVICSTLSGSAHDFL 1490
Query: 548 ANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQS 605
A+ +F QV+IDE+ Q E +IPL G K+ ++VGD QL P ++ +KAA +S
Sbjct: 1491 ASMSMKFDQVIIDEACQCVELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQKAASFKYEES 1550
Query: 606 LFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--P 662
LF R+ + + L VQYRMHP +S+FPS FY+ L +G + E+ + PW
Sbjct: 1551 LFVRMQRTNPESVYLLDVQYRMHPQISKFPSAQFYKSKLTDGPHMMEKNNR----PWHAD 1606
Query: 663 VPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS-----QIGVITP 717
P P F+ G+ + + S+ N +EA ++V ++ ++P +IG+I+P
Sbjct: 1607 FPLSPYRFFDIGGRHQQNVQTKSFFNPSEAKVALELVEKLMQ--ILPQDKFRGRIGIISP 1664
Query: 718 YEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
Y+ Q R ++ + G L + EI+ +VD FQG+EK+ II+SCVR++E +GFL+
Sbjct: 1665 YKEQIRTLKDTFVRKYGNL---ILNEIDFNTVDGFQGQEKEIIIMSCVRASESGSVGFLS 1721
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG 823
D RR+NVALTRAR + ILGN + L + +W+ L+ + +C+
Sbjct: 1722 DVRRMNVALTRARTTLWILGNKQSLRRDKIWSKLIADAESRDCVTSA 1768
>gi|125806827|ref|XP_699251.2| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein [Danio rerio]
Length = 2781
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 181/571 (31%), Positives = 259/571 (45%), Gaps = 80/571 (14%)
Query: 317 ASQGVP-VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMV 375
AS +P N F+V+ + K R + A+ V H + ++ Q V
Sbjct: 2214 ASMKIPKFKRNETFTVEIIPKLLPDIRKESAVNNLKGANELVQNIALKHRIVNQSSNQDV 2273
Query: 376 RNTLPRRFGAP-GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMA---- 430
L R AP GLP+LN SQ A++ L ++IQGPPGTGKTV A IVY +
Sbjct: 2274 PLYLLMREEAPAGLPQLNESQFKALEKALNGKFTIIQGPPGTGKTVVGAYIVYWFSQLNS 2333
Query: 431 -----------KQGQGQVLVCAPSNVAVDQLAEKISATG--LKVVR-------------- 463
K + +L C PSN +VD +AE + G LK++R
Sbjct: 2334 RNLWRLKDPTDKDKREVILYCGPSNKSVDVVAEYLLKFGEKLKLLRVYSRQMEMQEYPYP 2393
Query: 464 -----LCAKSREAVSSP-VEHLTLHYQVRHLDTSEKSELHKLQ-QLKDEQGELSSSDEKK 516
L KSR+ S P + +TLH+++R + ++K + L+ +D ++
Sbjct: 2394 GSNLQLSHKSRQERSKPELRAITLHHRIRMGHNPYSQRITDFDDRIKSDPYSLTDTDIEE 2453
Query: 517 YKALKRATEREISQSADVICCTCVGAGDPRLAN-FRFRQVLIDESTQATEPECLIPLV-L 574
YK L + D+I CTC A P L RQ+LIDE ATEP+ L+PLV
Sbjct: 2454 YKKLLNDARLHELERHDIILCTCTAAASPNLKKTLSARQILIDECAMATEPQTLVPLVSF 2513
Query: 575 GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFP 634
++VVL+GDH QL P++ R G+ +SLFER + + I L QYRMH + +FP
Sbjct: 2514 KPEKVVLLGDHKQLRPIVKNNHVRRLGMTRSLFERYMD---RAIMLDTQYRMHEEICKFP 2570
Query: 635 SNSFYEGTLQ----------NGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGT 684
S ++Y L+ N T RQS I F + + V + +
Sbjct: 2571 SEAYYNDMLKTVVRERTSVLNAETEGRRQSKRILFG-DIRGEEIGLVVSTAR----GNEN 2625
Query: 685 SYLNRTEAANVEKIVTTFLRSGVV-PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S N E +I + G V P I +++PY Q A I +S K
Sbjct: 2626 SKANFDEVKKAVEICIQLVTVGRVRPEDIAILSPYNAQVAQIRERLSDFE------LKGF 2679
Query: 744 EVASVDSFQGREKDYIILSCVRS---NE----------HQGIGFLNDPRRLNVALTRARY 790
V ++ QG E Y+ILS VRS +E + IGF+ D ++NV +TRA+
Sbjct: 2680 TVTTITKSQGSEWQYVILSIVRSCPSDEIEPMPSREWLSKHIGFVGDENQINVGITRAQV 2739
Query: 791 GIVILGNPKVLSKQPLWNGLLTHYKEHECLV 821
G+ ILGN VL+ P W LL HY H C+V
Sbjct: 2740 GLCILGNQAVLNCSPAWQKLLKHYSGHGCVV 2770
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 216/506 (42%), Gaps = 93/506 (18%)
Query: 390 ELNASQVFAVKSVLQR--------PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
+LN Q A+ +L + P+ LI GP GTGKT+ A+ +A + Q +VL+C
Sbjct: 530 QLNNKQQIALNFILGKCEDDKVAAPL-LIYGPFGTGKTLCLASAAKELAHRSQNKVLICT 588
Query: 442 PSNVAVDQLAEK----ISATG---LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
+N + D + G LK++R+ A + + +T Y
Sbjct: 589 YTNSSADLYVREHFHPYIINGHPTLKLLRIKANKGGSAIIATDDITRKYC---------- 638
Query: 495 ELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVG--AGDPRLANFRF 552
L S D + + R+ ++ +I T + + +L F
Sbjct: 639 --------------LCSRDGQSFILPARS---DLESHRIIITTTSIARHLHELKLPKGFF 681
Query: 553 RQVLIDESTQATEPECLIPLVLGAK--QVVLVGDHCQLGPVIMC---KKAARAGLAQSLF 607
+LIDE++Q E E L+ L L K +VVL GDH Q+ P + K + L LF
Sbjct: 682 THILIDEASQMLEGEALMALGLADKHTRVVLAGDHMQMAPKLFSVTDDKRSEHTLLNRLF 741
Query: 608 -----ERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
+ + + I YR + +F S FY + +G+ ++ G P P
Sbjct: 742 HYYQDQSINIAKKSRIIFNENYRSTTEIVDFVSTYFY---VSDGI-----KARGDVHPHP 793
Query: 663 VPNRPMFFYVQMGQEEISAS--GTSYLNRTEAANVEKIVTTFLRSGVV------PSQIGV 714
+P+ F+ G+ +S++ TS+LN E +V +V L + P QI V
Sbjct: 794 RL-KPLIFHHVRGECHLSSTITSTSWLNYAEVNSVVNMVQVLLTDWPMEWGDKDPKQICV 852
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEH----- 769
++ EGQ+ + LR++ + + V ++ + QG++ II++ V + +
Sbjct: 853 LS--EGQQVAAIRI-----HLRRKGFYGVSVQNLANIQGKQFRVIIITTVHTRDKLLQLD 905
Query: 770 -QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPL--- 825
F +D R LN ALTRA+ +V++G+ L + + Y EH C+ +G +
Sbjct: 906 SSCPEFFDDIRALNTALTRAQSLVVVIGDAGALCCFGKCSKVWRAYIEH-CISKGSIKPD 964
Query: 826 ----NNLKQSMVQFQKPKKIYNDRRL 847
+ L++ +++ K +K N ++
Sbjct: 965 HFTRDVLQREVLEISKFQKTENVEKI 990
>gi|392587391|gb|EIW76725.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1113
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 234/481 (48%), Gaps = 62/481 (12%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT--VTSAAIVYHMAKQGQGQVLVCA 441
G P LNA+Q+ A+ ++ ISL+QGPPGTGKT + A + + + +LV
Sbjct: 576 GDPVFDGLNATQIRAIAMMVGEKISLVQGPPGTGKTKTIIEAVKLLKVEFEVPQPILVAT 635
Query: 442 PSNVAVDQLAEKISATGLKVVR---------------LCAK---------------SREA 471
+NVAVD L E + GLK +R L AK +E
Sbjct: 636 YTNVAVDNLVEGLLKAGLKPLRVGFGGKVNASLHDCTLDAKMEKHRHKPVVDKLLAEQER 695
Query: 472 VSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEK------KYKALKRATE 525
++ + L + R D + +++ + L S+ + K L
Sbjct: 696 INQHIAELNKRLRERQRDPKIRDNARNQAIIENLRNALVVSERRLGIVRGKLHVLHNDML 755
Query: 526 REISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDH 585
R+I+ ADVIC TC+ + + L+ F V +DE++ +TEP LIPL+ G++ V L+GDH
Sbjct: 756 RDITAQADVICTTCISSVNSALSVIDFPVVFLDEASMSTEPASLIPLMRGSQHVALIGDH 815
Query: 586 CQLGPVIMCKKAARAGLAQSLFERLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
QL PVI+ +A GL SLFERL G+ P I L VQYRMHP+LS FPS FY +LQ
Sbjct: 816 KQLPPVIVSYEADLKGLGISLFERLTEEGVVPSIMLDVQYRMHPALSYFPSLEFYNLSLQ 875
Query: 645 NGVTINERQSSGIDFP-----WPVP----NRPMFFYVQMGQEEISASGTSYLNRTEAANV 695
+G + S + P PV NRP ++ E + S +N EA V
Sbjct: 876 DGTVDSGGNVSPLLLPPLSAHLPVDESTGNRPSIVFMDHAGSE-TLKDRSRVNYDEANIV 934
Query: 696 EKIVTTFLRSG--VVPSQIGVITPYEGQRAYIVNYMSRN-----------GALRQQLYKE 742
I+ L + IG+I PY Q + + ++ + G R + +
Sbjct: 935 CSIIEDLLLRNEHMRGDDIGIIAPYAAQISLLTRLLNTDAKYARRFAATLGDRRVRELSK 994
Query: 743 IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 802
+EV +VD F+GR+KD II S VR+N +GFL D RRLNV LTRA+ G+ ++G+ L
Sbjct: 995 VEVRTVDGFEGRQKDVIIFSTVRNNPAGHVGFLADRRRLNVGLTRAKRGLFVVGSISTLK 1054
Query: 803 K 803
+
Sbjct: 1055 Q 1055
>gi|312144201|ref|YP_003995647.1| DNA helicase [Halanaerobium hydrogeniformans]
gi|311904852|gb|ADQ15293.1| DNA helicase [Halanaerobium hydrogeniformans]
Length = 749
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 265/557 (47%), Gaps = 92/557 (16%)
Query: 328 GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPG 387
G +D T+FDRM A++ + + LL + + + F
Sbjct: 208 GVRLDLFVNETTFDRMFSALEIVKKPQNEIETRKRDILLAKKEFTNTAKISYNSDF---- 263
Query: 388 LPELNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVA 446
LN SQ+ A++ S+ LIQGPPGTGKTVT+ +V K+G +VL A SN A
Sbjct: 264 ---LNQSQIKAIENSLAAEDFYLIQGPPGTGKTVTAVELVLEAVKKG-NKVLTTAGSNTA 319
Query: 447 VDQLAEKISATGLKVVRL------CAKSREAV--------SSPVEHLTLHYQVRHLDTSE 492
VD L E + L VVR+ K R+ S +E L +V L +
Sbjct: 320 VDNLLELLIEKDLNVVRVGHPIRVNKKLRKNTLDDRVLKHHSYIEAEKLRDEVSDLINKQ 379
Query: 493 KSELH---------KLQQLKDEQG----------------------ELSSSDEKKYKALK 521
S ++ Q++K+ EL S +K +K ++
Sbjct: 380 DSYIYPGGKYRRGLSDQEIKEYAERDIEHHVRGISPKVINEMASWLELQSKIDKYFKQIE 439
Query: 522 RATER---EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
+ +I ADVIC T + AG L +F F +IDE+TQ+T+P LIP + K
Sbjct: 440 KLENEAVEDILNKADVICSTNITAGSEILKDFHFNLSVIDEATQSTQPATLIPYFMADKS 499
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPI----RLQVQYRMHPSLSEFP 634
V L+GDH QL P ++ ++AA+ GLA+SLFERL P L++QYRM+ + F
Sbjct: 500 V-LIGDHKQLPPTVINQQAAKGGLAKSLFERLS--ETHPTDALSTLKIQYRMNRKIMGFS 556
Query: 635 SNSFYEGTLQNGVTINERQSSGID-FPWP---------VPNRPMFFYVQMGQEEISAS-- 682
S +FY+G+L+ ++ + + +P P PM F + +E+ AS
Sbjct: 557 SLNFYDGSLRAAPSVAQHNLGDLGVYPQSEKCFTEKALKPEYPMVF---LDTKEMEASER 613
Query: 683 ----GTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQ 738
SY N E+ V I+ + + I VITPY+ Q V+ ++++ L
Sbjct: 614 SLKASNSYDNPVESEIVLDILDRAAMLSMDENNIAVITPYKDQ----VDLLNQHNNL--- 666
Query: 739 LYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNP 798
EIE+ +VD+FQGREK+ ++ S VRSN+ IGFL D RRLNVALTRA+ I+ +G+
Sbjct: 667 --TEIEIDTVDAFQGREKEMVVFSAVRSNDDANIGFLRDLRRLNVALTRAKRKIIFIGDS 724
Query: 799 KVLSKQPLWNGLLTHYK 815
+ + + LLT+ K
Sbjct: 725 STICQHQSYKNLLTYIK 741
>gi|423303764|ref|ZP_17281763.1| hypothetical protein HMPREF1072_00703 [Bacteroides uniformis
CL03T00C23]
gi|423307517|ref|ZP_17285507.1| hypothetical protein HMPREF1073_00257 [Bacteroides uniformis
CL03T12C37]
gi|392687095|gb|EIY80392.1| hypothetical protein HMPREF1072_00703 [Bacteroides uniformis
CL03T00C23]
gi|392690126|gb|EIY83397.1| hypothetical protein HMPREF1073_00257 [Bacteroides uniformis
CL03T12C37]
Length = 610
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 244/464 (52%), Gaps = 49/464 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL R ++++ GPPGTGKT T +Y + +
Sbjct: 159 RELYPVRF-----PWLNSTQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHR-E 212
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 213 PQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFENHPLYP 268
Query: 495 ELHKLQQLKDEQGELS---SSDEKK------YKALKRATEREISQSAD------VICCTC 539
EL +++ E G + S DE++ + RAT EI +A+ VI T
Sbjct: 269 ELWSIRKNLRELGSRARRGSYDEREGVRSRMSRLRDRATALEIQINAELFDGAHVIASTL 328
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + A +VVL GDHCQL P I C +AAR
Sbjct: 329 VSSNHRLLNGRRFGTLFIDEAAQALEAACWIA-IRKADRVVLAGDHCQLPPTIKCYEAAR 387
Query: 600 AGLAQSLFERLVLLGLKPI---RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
GL ++L E++V KP L+VQYRMH + +FPS FY G L+ + R
Sbjct: 388 GGLERTLMEKVV--SNKPAVVSLLKVQYRMHEEIMKFPSQWFYNGELEAAPEVRYRGILD 445
Query: 657 IDFP--WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL-RSG---VVPS 710
D P W + M F +EE +N+ EA + + ++ R G ++
Sbjct: 446 WDTPIHW-IDTSEMDF-----KEEFVGETFGRINKAEADLLLSELKIYINRIGGNRILEE 499
Query: 711 QI--GVITPYEGQRAYIVNYMSRNGALRQQLYKEI-EVASVDSFQGREKDYIILSCVRSN 767
+I G+I+PY+ Q Y+ + + + +L+ Y+ + V +VD FQG+E+D I +S VR+N
Sbjct: 500 KIDIGIISPYKAQVQYLRSKIKADASLKP--YRSLFTVNTVDGFQGQERDVIFISLVRAN 557
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
E IGFLND RR+NVA+TRAR +VILG + L + LL
Sbjct: 558 EEGQIGFLNDLRRMNVAITRARMKLVILGEAETLKHHGFYRKLL 601
>gi|294655237|ref|XP_002770105.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
gi|199429794|emb|CAR65475.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
Length = 1968
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 257/532 (48%), Gaps = 106/532 (19%)
Query: 387 GLPELNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIV----YHMAKQG-------- 433
L ++N SQ A+ S SLIQGPPGTGKT T IV H K+G
Sbjct: 1305 SLYDVNRSQAKAIMGSYNSDGFSLIQGPPGTGKTKTILGIVGYSISHQQKEGTIIIPKGI 1364
Query: 434 ---------QGQ-----VLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSR 469
+G+ +L+CAPSN AVD+L ++ G+K VVRL
Sbjct: 1365 ADNNPLAGSKGESNGPKILICAPSNAAVDELVLRLRK-GVKTSKGESIIPRVVRLGRS-- 1421
Query: 470 EAVSSPVEHLTL------HYQVRHLDTSE------------------KSELHK------- 498
+A+++ V+ LTL QV+ ++T+ + EL K
Sbjct: 1422 DAINAAVKDLTLEELVDKQLQVQSVNTTSDPKIRMEHTKCIAERDRLREELRKPNLNEEE 1481
Query: 499 -----------------LQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVG 541
L + DEQ E S + + +R + +I S+ +IC T G
Sbjct: 1482 IKVLEIQLRDTNKSRNELAKKLDEQRERISIAYRTKEIERRQLQAKILNSSQIICSTLSG 1541
Query: 542 AGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
+ LAN +F QV+IDE+ Q+ E +IPL G K+ ++VGD QL P ++ + AA
Sbjct: 1542 SAHDFLANMSMKFDQVIIDEACQSVELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAAS 1601
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
QSLF R+ + + + L VQYRMHP++S+FPS+ FY L +G + + S
Sbjct: 1602 FNYEQSLFVRMQKMYPESVYLLDVQYRMHPAISKFPSSEFYFSRLHDGEGMAAKNSR--- 1658
Query: 659 FPW--PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS-----Q 711
PW P P F+ +G+ + + S N EA ++V ++ ++P +
Sbjct: 1659 -PWHKDYPLSPYMFFDIVGKHQQNELSRSLFNYAEAQVALELVDKLIQ--ILPQTEFSGR 1715
Query: 712 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
IG+I+PY+ Q + + R + EI+ +VD FQG+EK+ II+SCVR++E
Sbjct: 1716 IGIISPYKEQIRTLKDVFKRKYG--HSILSEIDFNTVDGFQGQEKEIIIMSCVRASESGN 1773
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG 823
+GFL+D RR+NVALTRAR + ILGN K LS+ +W LL E + E
Sbjct: 1774 VGFLSDVRRMNVALTRARTSLWILGNKKSLSRNTVWKRLLDDAAERNAVSEA 1825
>gi|353241966|emb|CCA73744.1| related to regulator of nonsense transcripts 1 [Piriformospora
indica DSM 11827]
Length = 850
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 233/463 (50%), Gaps = 63/463 (13%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKT--VTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
LNASQ A+ + + +SL+QGPPGTGKT + A + + + +LVC +NVAVD
Sbjct: 326 LNASQTQAIALMFKERLSLVQGPPGTGKTRTIIEALRILKSHFKVEHPLLVCTYTNVAVD 385
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKD---- 504
L E I+ G+ +R+ E + H V+ ++ E+ +++Q++D
Sbjct: 386 NLVEGIADAGMNPLRV---GNEGGAQMERHPRWPEVVKIMN-----EIAQIRQIRDRLRR 437
Query: 505 EQGELSSSDEKK---------------YKALKRATEREISQSADVICCTCVGAGDPRLAN 549
E G S +K+ L+ A I +SADVIC TC+ AG
Sbjct: 438 EMGSAPSDQQKESISRLGNKIHLLRESKAKLESAMRYMIFKSADVICTTCITAGSSAFRM 497
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F V +DE++ +TEP LIPL+ G K + L+GDH QL PVI + A GL +SLFER
Sbjct: 498 MDFPVVFLDEASMSTEPASLIPLMHGCKHLALIGDHKQLPPVITSELAKEGGLGKSLFER 557
Query: 610 LVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR-- 666
L+ G P + L QYRMHPS+S FPS+ FY L++G TI+ + G+ P+
Sbjct: 558 LIEEGSVPSVMLDTQYRMHPSISAFPSDEFYGKALRDG-TIS--PAGGVPATLAPPHSMH 614
Query: 667 ------------PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL--RSGVVPSQI 712
P ++ EIS S N E V ++ L G+ I
Sbjct: 615 LARRKSKLTGEIPAVLFIHHDNHEISRD-RSRANLEEMKIVAAVLEDLLLMNPGLRGRDI 673
Query: 713 GVITPYEGQRAYIVNYM-----SRNGALRQQL-------YKEIEVASVDSFQGREKDYII 760
G+I+PY Q ++N M S A R L +++E+ +VD F+GREK+ II
Sbjct: 674 GIISPYVAQ-VRMLNKMLKEDSSWADAFRDALGDPRCHELQDVEIKTVDGFEGREKEIII 732
Query: 761 LSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
S VR+N IGFL D RR+NVALTRA+ + ++G+ LSK
Sbjct: 733 FSTVRNNSWGHIGFLADRRRMNVALTRAKRALFVVGSISTLSK 775
>gi|302309402|ref|NP_986774.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|299788342|gb|AAS54598.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|374110024|gb|AEY98929.1| FAGR108Cp [Ashbya gossypii FDAG1]
Length = 930
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 239/461 (51%), Gaps = 49/461 (10%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVD 448
+LN SQ A ISLI+GPPGTGKT I+ K G ++C A SNVAVD
Sbjct: 482 KLNESQEAAYAYFHANRISLIKGPPGTGKTAVIVEIIKRTVKLETGCPVLCTAGSNVAVD 541
Query: 449 QLAEKISAT-GLKVVRLCAKSREAVSSPVEH----LTLHYQVRHLDTSEKSELHKLQQLK 503
+AE++ ++ VR+CA +R P EH + LH + + +L+ L
Sbjct: 542 NIAERLLGDPTVRPVRICAGAR-IEQYPDEHPLAPICLHTHILKQLPPQYQKLYLLWAKG 600
Query: 504 DEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQ 562
D + E A + +I A+V+ T + AG+ + V++DE+TQ
Sbjct: 601 DVDNDSPGFHEMVLIANR--VSYDIVSDANVLLATNISAGNRSIRKLPEVPTVIMDEATQ 658
Query: 563 ATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-- 619
ATE L+PL L G +++VLVGD QL P + + SLF R+V P
Sbjct: 659 ATEASTLVPLALAGIQKLVLVGDEKQLPPFALSRNPK-----TSLFNRVVTRS--PAEDL 711
Query: 620 --LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQE 677
L++QYRMHP++ EFP+ FY+ L+NGVT +R G+ P +F + E
Sbjct: 712 QFLKIQYRMHPAICEFPNMQFYDNRLRNGVTPEDRSWLGVQEPV------VFIDIPSSAE 765
Query: 678 E----ISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 729
++ S+ N EA A + K+V+ + V PSQIGVITPY QR I + +
Sbjct: 766 RRGQAAASQDMSWCNLAEADFVCATLRKLVS---KKHVPPSQIGVITPYVAQRDAIASRL 822
Query: 730 SRNGALRQQLY---------KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
+R+ L + K++ VASVD+FQG E+ +II SCVRSN +GF++D RR
Sbjct: 823 ARDTTLAAHVTMHEVADPDSKQLMVASVDAFQGHERAFIIFSCVRSNSDGQLGFVSDRRR 882
Query: 781 LNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECL 820
+NVALTRAR G++++G+ L+K +W +T+ + + +
Sbjct: 883 MNVALTRARNGLIVVGHADTLAKGSKIWRAYITYLRSRDLV 923
>gi|423345058|ref|ZP_17322747.1| hypothetical protein HMPREF1060_00419 [Parabacteroides merdae
CL03T12C32]
gi|409222844|gb|EKN15781.1| hypothetical protein HMPREF1060_00419 [Parabacteroides merdae
CL03T12C32]
Length = 639
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 254/512 (49%), Gaps = 45/512 (8%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPE 390
V + TS+ M A+ T + + Y+ LLG + R P RF P
Sbjct: 136 VQLYFDETSYKTMFNALSTVIQAKGNRLAYLRDVLLGKTPVGR--RTFFPMRF-----PW 188
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN AVD
Sbjct: 189 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCAQSNTAVDW 247
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQL------- 502
++EK+ G+ V+R+ +R ++ + L+ Y+ R + +EL +++
Sbjct: 248 ISEKLVDRGIHVLRIGNPTR--INDKM--LSFTYERRFESHPDYAELWGIRKAIREIQSN 303
Query: 503 --KDEQGELSSSDEKKYKALKRATEREIS------QSADVICCTCVGAGDPRLANFRFRQ 554
K GE ++ + + RATE E+ A V+ CT VG+ + L N F
Sbjct: 304 LRKKSHGEKETARNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTT 363
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
+ IDE+ QA E C I + A +V+L GDH QL P I C +AAR GL +L +++
Sbjct: 364 LFIDEAAQALEAACWIA-IGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRK 422
Query: 615 LKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--WPVPNRPMFFY 671
+ + L + QYRM+ + FPS FY LQ+ + R D P W F
Sbjct: 423 PETVSLLKTQYRMNEDIMRFPSRWFYHDELQSAPEVKHRGILEFDTPVVWLDTADCHF-- 480
Query: 672 VQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI--GVITPYEGQRAYI 725
+E+ S +NR EA + ++K + + V+ I G+I+PY+ Q YI
Sbjct: 481 ----EEDRLDDSMSRINRDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYI 536
Query: 726 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
+ R+ + + I +VD FQG+E+D I++S VR+N+ IGFL D RR+NVA+
Sbjct: 537 RGLIKRDTFFKP-FRRLITAHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAI 595
Query: 786 TRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
TRAR ++ILG+ L++ + L + E+
Sbjct: 596 TRARMKLMILGDAPTLTRHAFYKELYEYIWEN 627
>gi|168705200|ref|ZP_02737477.1| DNA-binding protein SMUBP-2 [Gemmata obscuriglobus UQM 2246]
Length = 766
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 229/458 (50%), Gaps = 50/458 (10%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN Q AV L P ++I GPPGTGKT T + + +G +VL CAPSN AVD
Sbjct: 315 LNEPQRDAVAFALAAPDFAIIHGPPGTGKTTTVVEFIRKLVARGD-KVLACAPSNHAVDN 373
Query: 450 LAEKISATGLKVVRLC---------------------AKSREAVSSPVEHLTLHYQVRHL 488
L EK+ G VRL +R+A E L Q
Sbjct: 374 LLEKLLGVGELPVRLGHPARVMPELRARAIDILAEKHPDARQARKVAREAFALFRQADKW 433
Query: 489 DTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLA 548
T EK + + L+ E E+ + + ++ +A ATER + + A V+C T G L
Sbjct: 434 -TREKPQPGEKAALRKEAREMLT-EVRRLEA--SATERVLDE-ARVVCATLTGLDSQLLG 488
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
RF V+IDE+ Q+TEP +PL L A +VVL GDHCQL P ++ +AA GL+ SL E
Sbjct: 489 QRRFDVVVIDEACQSTEPAAWVPL-LRANKVVLAGDHCQLPPTVLSPEAAERGLSVSLME 547
Query: 609 RLVL-LGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINER---QSSGIDFPWPV 663
RLV G RL VQ+RMH ++ F + FY+ L ++ G+ P+
Sbjct: 548 RLVRQFGPGASRLLTVQHRMHAAVMGFSNGEFYDSQLVAHESVAAHLLCHLPGVARD-PL 606
Query: 664 PNRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEG 720
P+ F G EE+ S N EA K V L G+ PSQIG+ITPY
Sbjct: 607 TETPVQFIDTAGASYDEELEEDTGSRFNAQEATLAVKKVRALLALGIAPSQIGLITPYRA 666
Query: 721 QRAYIVNYMSRNGALRQQLYK--EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q LR++L +E+ SVD FQGREK+ I++S VRSN IGFL+D
Sbjct: 667 QVRL----------LREKLADVPGLEIDSVDGFQGREKEAIVVSLVRSNNEGEIGFLSDT 716
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
RR NVA TRAR ++++G+ L+ P + +LT++++
Sbjct: 717 RRTNVAFTRARRKLLVIGDSATLASDPFYQRMLTYFEQ 754
>gi|170097065|ref|XP_001879752.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645155|gb|EDR09403.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 829
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 241/493 (48%), Gaps = 74/493 (15%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCA 441
G P L LN SQ+ AV ++++ +SL+QGPPGTGKT T + + + +LVC
Sbjct: 293 GDPPLDGLNRSQIRAVATMIKHRLSLVQGPPGTGKTKTIIETIKLLKVHFEIPHPILVCT 352
Query: 442 PSNVAVDQLAEKISATGLKVVRLC--AKSREAV------SSPVEHL---TLHYQVRHLDT 490
+NVAVD L E + G+K +R+ +E++ + EH TL Q++ D
Sbjct: 353 YTNVAVDNLVEGLVNAGVKALRVGFGGSIKESLRPHSLDTKLEEHRLQKTLKAQIKEKDD 412
Query: 491 SEKSELHKLQQLKDEQGELSSSD-------------------------EKKYKALKRATE 525
+ +L+D Q ++SS+ + K ++++
Sbjct: 413 LQVKMDDLEARLRDVQDKISSTSTGRLVEKEQNMKKALVSMQKQFAVTKMKVYSIQQEML 472
Query: 526 REISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDH 585
R++ +AD IC TC+ + L F V +DE++ +TEP LIP++ G++ V L+GDH
Sbjct: 473 RDVVNAADAICTTCITSACMALNVTDFPVVFLDEASMSTEPASLIPIMKGSRHVALIGDH 532
Query: 586 CQLGPVIMCKKAARAGLAQSLFERLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
QL PVI+ ++A GL SLFERL P + L VQYRMHP++S FPS+ FY L
Sbjct: 533 KQLPPVIISREAQALGLGMSLFERLTGEAAVPSVMLDVQYRMHPAISRFPSHEFYNRALL 592
Query: 645 NGVTINERQSSGIDFPWPVP-----NRP---------MFFYVQMGQEEISASGTSYLNRT 690
+G G P P RP + F G E S S +NR
Sbjct: 593 DGTV----DVFGNAIPRLSPPDSHYLRPHVETGASPSIVFLDHAGDE--SVKDRSRVNRN 646
Query: 691 EAANVEKIVTTFLRSG--VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE------ 742
EA V +V L + + S IG+I PY Q + + + + A Q +KE
Sbjct: 647 EAYIVASVVEDLLLNNPHLRGSDIGIIAPYVAQISLLTRLFNTD-ATYQARFKEVLGDHR 705
Query: 743 ------IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILG 796
IE+ +VD F+GREK+ II S VR+N IGFL D RRLNV LTRA+ G++++G
Sbjct: 706 AMQLPHIEIKTVDGFEGREKEVIIFSTVRNNAGGYIGFLADKRRLNVGLTRAKRGLIVVG 765
Query: 797 NPKVLSKQPLWNG 809
+ L + G
Sbjct: 766 SINTLKSSKMSGG 778
>gi|358371124|dbj|GAA87733.1| tRNA-splicing endonuclease [Aspergillus kawachii IFO 4308]
Length = 2117
Score = 219 bits (559), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 184/602 (30%), Positives = 280/602 (46%), Gaps = 124/602 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM------------------AK 431
+N++Q A+KS L +LIQGPPG+GKT T A+V + AK
Sbjct: 1288 VNSAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSNVLGNQGVAISRPMGNAK 1347
Query: 432 QGQG------QVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSPV 476
G ++LVCAPSN AVD+L + L V+RL +A+++ V
Sbjct: 1348 PAGGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRQEKLSVIRL--GRSDAINTNV 1405
Query: 477 EHLTL------------------------HYQVRHLDTSEKSELHKLQQ----------- 501
+TL + + + DT+ K ++ Q
Sbjct: 1406 LDVTLDELVNARLNQTARKDPGERDLQKIYMEHKAADTAFKETRARMDQCRAQGLPVPAE 1465
Query: 502 -------LKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTCVGAGD 544
LK ++ +LS S+ +K + A +R ++EI A VIC T G+G
Sbjct: 1466 LEREFDLLKKKKTQLSQEIDSARDKNHSAARDAELTRRRIQQEIIDGAHVICATLSGSGH 1525
Query: 545 PRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1526 EMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQY 1585
Query: 603 AQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
QSLF R+ + + L +QYRMHP +S FPS++FY+G LQ+G + + + PW
Sbjct: 1586 EQSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVR----PW 1641
Query: 662 PVPN--RPMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGVI 715
P F+ G + +A G S +N R E++VT F R+ +IG+I
Sbjct: 1642 HQSELLSPYRFFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDF-RAFNFDRKIGII 1700
Query: 716 TPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
TPY+GQ R + +R G +++ +I+ + D+FQGRE + II SCVR++ ++GIGF
Sbjct: 1701 TPYKGQLRELKTQFAARYG---NEIFNKIDFNTTDAFQGRESEVIIFSCVRAS-NKGIGF 1756
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ---- 830
L D RR+NV LTRA+ + +LGN + L + WNGL+ + +G + + Q
Sbjct: 1757 LADIRRMNVGLTRAKSSLWVLGNSQALVQGEFWNGLIKDARRRNVYTDGDVLKILQRPQF 1816
Query: 831 ------SMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSN-PNADRRGSRARGYMPPGPP 883
M+ Q + R A P P+ S N P+ S + PP PP
Sbjct: 1817 TGYQNVDMLDAQTEASVVQSRAA--SAAPVSRPSSASARNSPSV----SVSEQETPPVPP 1870
Query: 884 NG 885
+G
Sbjct: 1871 DG 1872
>gi|294675290|ref|YP_003575906.1| helicase [Prevotella ruminicola 23]
gi|294473767|gb|ADE83156.1| putative helicase [Prevotella ruminicola 23]
Length = 539
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 239/457 (52%), Gaps = 52/457 (11%)
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LNA+Q AV VL+ + ++++ GPPGTGKT T +Y + + QVLVCA SN+AVD
Sbjct: 97 LNATQEDAVNKVLRAKDVAIVHGPPGTGKTTTLVEAIYETLMR-ESQVLVCAQSNMAVDW 155
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LKDEQGE 508
++E + G+ V+R+ +R V+ + L+ Y+ R + L L++ +++ +
Sbjct: 156 ISEILVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFEAHPDYEMLWALRKAIREVRAN 211
Query: 509 LSSSDEKKYKALKRATER----------EISQSADVICCTCVGAGDPRLANFRFRQVLID 558
D+K ++ ++R ER ++ A VI CT VG+ + L +F + ID
Sbjct: 212 RKRGDQKFHQKVERLKERATELELRIKNDLFSEARVIACTLVGSANKVLDGQKFGTLFID 271
Query: 559 ESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP- 617
E+ QA E C IP+ +V+L GDHCQL P + C +A +AGL ++L ER+V KP
Sbjct: 272 EAAQALEAACWIPM-RRVSRVILAGDHCQLPPTVKCYEALKAGLGKTLMERIV--ENKPE 328
Query: 618 --IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMG 675
L++QYRM+ + F S+ FY +++ + R +D P + F + +
Sbjct: 329 VVTLLKMQYRMNEEIMRFSSDWFYNNQVESAPDVKYRSILDLDVPMTWIDTSQFDFPEES 388
Query: 676 ----QEEISASGTSYLNRTEAA----NVEKIVTTFLRSGVVPSQI--GVITPYEGQRAYI 725
+EE +N+ EA +++ + ++ +I GVI+PY Q Y
Sbjct: 389 GITFKEEFVGESFGRINKAEAELTMLALQQYFEKIGKERIIKERIDVGVISPYRAQVQY- 447
Query: 726 VNYMSRNGALRQQLYKE---------IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
LRQQL K I + +VD FQG+E+D I++S VR+N+ IGFL
Sbjct: 448 ---------LRQQLKKREFFKPFKSLISINTVDGFQGQERDIIMISLVRANDEGQIGFLR 498
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
D RR+NVA+TRAR ++ILG+ L++ P + L +
Sbjct: 499 DLRRMNVAITRARMKLIILGDASTLTRHPFYKKLYDY 535
>gi|423723542|ref|ZP_17697691.1| hypothetical protein HMPREF1078_01678 [Parabacteroides merdae
CL09T00C40]
gi|409241252|gb|EKN34022.1| hypothetical protein HMPREF1078_01678 [Parabacteroides merdae
CL09T00C40]
Length = 639
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 254/512 (49%), Gaps = 45/512 (8%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPE 390
+ + TS+ M A+ T + + Y+ LLG + R P RF P
Sbjct: 136 IQLYFDETSYKTMFNALSTVIQAKGNRLAYLRDVLLGKTPVGR--RTFFPMRF-----PW 188
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN AVD
Sbjct: 189 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCAQSNTAVDW 247
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQL------- 502
++EK+ G+ V+R+ +R ++ + L+ Y+ R + +EL +++
Sbjct: 248 ISEKLVDRGIHVLRIGNPTR--INDKM--LSFTYERRFESHPDYAELWGIRKAIREIQSN 303
Query: 503 --KDEQGELSSSDEKKYKALKRATEREIS------QSADVICCTCVGAGDPRLANFRFRQ 554
K GE ++ + + RATE E+ A V+ CT VG+ + L N F
Sbjct: 304 LRKKSHGEKETARNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTT 363
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
+ IDE+ QA E C I + A +V+L GDH QL P I C +AAR GL +L +++
Sbjct: 364 LFIDEAAQALEAACWIA-IGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRK 422
Query: 615 LKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--WPVPNRPMFFY 671
+ + L + QYRM+ + FPS FY LQ+ + R D P W F
Sbjct: 423 PETVSLLKTQYRMNEDIMRFPSRWFYHDELQSAPEVKHRGILEFDTPVVWLDTADCHF-- 480
Query: 672 VQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI--GVITPYEGQRAYI 725
+E+ S +NR EA + ++K + + V+ I G+I+PY+ Q YI
Sbjct: 481 ----EEDRLDDSMSRINRDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYI 536
Query: 726 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
+ R+ + + I +VD FQG+E+D I++S VR+N+ IGFL D RR+NVA+
Sbjct: 537 RGLIKRDTFFKP-FRRLITAHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAI 595
Query: 786 TRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
TRAR ++ILG+ L++ + L + E+
Sbjct: 596 TRARMKLMILGDAPTLTRHAFYKELYEYIWEN 627
>gi|154492784|ref|ZP_02032410.1| hypothetical protein PARMER_02423 [Parabacteroides merdae ATCC
43184]
gi|154087089|gb|EDN86134.1| putative DNA helicase [Parabacteroides merdae ATCC 43184]
Length = 640
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 165/512 (32%), Positives = 256/512 (50%), Gaps = 45/512 (8%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPE 390
+ + TS+ M A+ T + + Y+ LLG + R P RF P
Sbjct: 137 IQLYFDETSYKTMFNALSTVIQAKGNRLAYLRDVLLGKTPVGR--RTFFPMRF-----PW 189
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AV VL + +S++ GPPGTGKT T +Y + + QV+VCA SN AVD
Sbjct: 190 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHR-ENQVMVCAQSNTAVDW 248
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSE----KSELHKLQQ- 501
++EK+ G+ V+R+ +R ++ + L+ Y+ R H D +E + + ++Q
Sbjct: 249 ISEKLVDRGIHVLRIGNPTR--INDKM--LSFTYERRFESHPDYAELWGIRKAIREIQSN 304
Query: 502 -LKDEQGELSSSDEKKYKALKRATEREIS------QSADVICCTCVGAGDPRLANFRFRQ 554
K GE ++ + + RATE E+ A V+ CT VG+ + L N F
Sbjct: 305 LRKKSHGEKETARNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTT 364
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
+ IDE+ QA E C I + A +V+L GDH QL P I C +AAR GL +L +++
Sbjct: 365 LFIDEAAQALEAACWIA-IGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRK 423
Query: 615 LKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--WPVPNRPMFFY 671
+ + L + QYRM+ + FPS FY LQ+ + R D P W F
Sbjct: 424 PETVSLLKTQYRMNEDIMRFPSRWFYHDELQSAPEVKHRGILEFDTPVVWLDTADCHF-- 481
Query: 672 VQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI--GVITPYEGQRAYI 725
+E+ S +NR EA + ++K + + V+ I G+I+PY+ Q YI
Sbjct: 482 ----EEDRLDDSMSRINRDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYI 537
Query: 726 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
+ R+ + + I +VD FQG+E+D I++S VR+N+ IGFL D RR+NVA+
Sbjct: 538 RGLIKRDTFFKP-FRRLITAHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAI 596
Query: 786 TRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
TRAR ++ILG+ L++ + L + E+
Sbjct: 597 TRARMKLMILGDAPTLTRHAFYKELYEYIWEN 628
>gi|366999404|ref|XP_003684438.1| hypothetical protein TPHA_0B03320 [Tetrapisispora phaffii CBS 4417]
gi|357522734|emb|CCE62004.1| hypothetical protein TPHA_0B03320 [Tetrapisispora phaffii CBS 4417]
Length = 1133
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 153/489 (31%), Positives = 248/489 (50%), Gaps = 76/489 (15%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVDQ 449
LN SQ A++ VL I+++QGPPGTGKT T I+ M K ++C A SN+A+D
Sbjct: 655 LNDSQKSAIQHVLNNSITILQGPPGTGKTSTIEEIILQMIKNFNSFPILCVAASNIAIDN 714
Query: 450 LAEKI--SATGLKVVRLCAKSRE---AVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKD 504
+AEK+ S +K++R+ ++ +E P+ + LH V D ++ + L +K
Sbjct: 715 IAEKLLESKPDIKILRILSEGKEQQYGKDHPLGKICLHNIVN--DQLSENGIDTL--IKV 770
Query: 505 EQGELSSSDEKKYKAL----KRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI-DE 559
G + + + L ++R +SQ A ++ T + AG +L + + V+I DE
Sbjct: 771 RSGRIKDVSKNQLNKLMTEQNNISDRYVSQ-AQILLTTNIAAGGRQLKSIKEVPVVIMDE 829
Query: 560 STQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG--LK 616
+TQ++E L+PL L G + V VGD QL + L SLFER++L G
Sbjct: 830 ATQSSEMSTLVPLSLPGIRTFVFVGDEKQLSSF-----SNVPQLEMSLFERILLNGSYKN 884
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY-VQMG 675
P L QYRMHP +S FP FY+ L +GVT +++ WP P++F+ G
Sbjct: 885 PHMLDTQYRMHPQISRFPIEKFYDNKLLDGVTEEQKK-------WPGIEHPLYFHQCDKG 937
Query: 676 QEEI------SASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITPYEGQRAYIVNY 728
E + G +Y N+ E + K + + VP ++IG+ITPY QR I
Sbjct: 938 LENKVFNYNRGSRGFTYTNKHEVKEIVKFIYRLILEKNVPRTEIGIITPYSAQRDLISET 997
Query: 729 MSRNGAL---RQQLYKEIE---------------------------------VASVDSFQ 752
+ ++ + R ++ +E++ ++++DSFQ
Sbjct: 998 LQKDLVVNPERLEMEREVDDLDLLNSRLRAKTSGLSNDGNKVNTINIINGVFISTIDSFQ 1057
Query: 753 GREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ-PLWNGLL 811
G EK +II SCVR+N+ IGF++D RR+NVALTRA++G++++GN +L K LW +
Sbjct: 1058 GHEKGFIIFSCVRNNKENKIGFVSDKRRMNVALTRAKHGLIMIGNKNILKKDTKLWASYI 1117
Query: 812 THYKEHECL 820
+ ++H +
Sbjct: 1118 DYLEKHNLI 1126
>gi|385800522|ref|YP_005836926.1| DNA helicase [Halanaerobium praevalens DSM 2228]
gi|309389886|gb|ADO77766.1| DNA helicase [Halanaerobium praevalens DSM 2228]
Length = 749
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 181/555 (32%), Positives = 274/555 (49%), Gaps = 82/555 (14%)
Query: 326 NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 385
N G +D TSF RM A++ + LL + + F
Sbjct: 206 NRGVRLDLFVNDTSFQRMFSALEKIKHPANEIEKSKRDILLNRK------KPEFKSEFDL 259
Query: 386 PGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
+ N SQ A+K+ LQ + + LIQGPPGTGKT+T+ I+ K G +VL A SN
Sbjct: 260 E-IENFNHSQKNAIKNSLQAKKLYLIQGPPGTGKTLTAVEIIQQAVKNG-DKVLATADSN 317
Query: 445 VAVDQLAEKISATGLKVVR------LCAKSREAVSSPV--EHL------TLHYQVRHLDT 490
AVD L E ++A LKV+R + K RE + EH L QV L
Sbjct: 318 TAVDNLLELLAANNLKVIRIGHPIRVNKKLREHTLDEIVLEHQDYLKAEKLRDQVSDLIN 377
Query: 491 SEKSELH---KLQQ-LKDEQ---------------------GELSSSDE---------KK 516
+++ ++ K ++ L D++ E++S E KK
Sbjct: 378 KQEAYIYPSGKYRRGLSDQEIKNYAEKDLEKHVRGISPEVIEEMASWIELQEKIDKYFKK 437
Query: 517 YKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA 576
++L+ E+ +ADVIC T + AG L N +F +IDE+TQAT+P LIP L A
Sbjct: 438 IESLENKAVEELITAADVICTTNITAGAEILENQQFDLSIIDEATQATQPAALIPY-LKA 496
Query: 577 KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFP 634
K+ +L+GD QL P ++ ++AA+ GL SLFE+L+ L++QYRMH + F
Sbjct: 497 KKTILIGDQQQLPPTVVNQEAAKNGLKISLFEKLIKTYQNDFSSLLKIQYRMHRKIMGFS 556
Query: 635 SNSFYEGTLQNGVTINERQSSGIDFPWP----VPNR------PMFFY--VQMGQEEISAS 682
S FY L+ ++ + S + F P++ PM F +M EE S +
Sbjct: 557 SIYFYNNYLKAADSVAKNTLSDLGFQLENKSCFPDKSLKAEYPMVFLDTKEMKAEERSFA 616
Query: 683 GT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK 741
G+ SY N EA V ++ L+S + +I VI Y+ Q V++++++ +K
Sbjct: 617 GSNSYDNPVEAEIVLDLLDRALKSSLKEEEIAVIAAYKDQ----VDFINQHNK-----FK 667
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
+E+ +VD+FQGREK+ II S VRSN+ IGFL D RRLNVALTRA+ ++ +G+ +
Sbjct: 668 NVEIDTVDAFQGREKEMIIFSAVRSNQDNNIGFLRDLRRLNVALTRAKRKMIFVGDSSTI 727
Query: 802 SKQPLWNGLLTHYKE 816
K ++ LL + K+
Sbjct: 728 CKYNVYEKLLKYIKK 742
>gi|68465577|ref|XP_723150.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|68465870|ref|XP_723003.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|46445015|gb|EAL04286.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|46445171|gb|EAL04441.1| potential nuclear RNA processing factor [Candida albicans SC5314]
Length = 2018
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 198/674 (29%), Positives = 297/674 (44%), Gaps = 147/674 (21%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-YHMAKQ---------------- 432
+N SQ A+ + SLIQGPPGTGKT T IV Y ++++
Sbjct: 1297 VNDSQARAIMGTFKSEGFSLIQGPPGTGKTKTILGIVGYSLSQEKNNKVIDISGSGSSPT 1356
Query: 433 --GQGQVLVCAPSNVAVDQLAEKI-----SATG----LKVVRLCAKSREAVSSPVEHLTL 481
+ ++L+CAPSN AVD+L ++ +++G LKVVRL +A++S V LTL
Sbjct: 1357 PSDKAKILICAPSNAAVDELVLRLRDGVRNSSGEHMPLKVVRL--GRSDAINSSVRDLTL 1414
Query: 482 HYQV-RHLDT-------------------SEKSELHK----------------------- 498
V + L T +E+ EL K
Sbjct: 1415 EELVDKELQTKQTEVVIDPNIRLEHTKCINERDELRKRLATESLEEKEITELEEKIRAIN 1474
Query: 499 -----LQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--R 551
L + DEQ E +S + + +R + I A V+C T G+ +AN +
Sbjct: 1475 KKRSELAKKLDEQREKASIANRTKEINRRNIQARILSEAQVLCSTLSGSAHDLVANLSVQ 1534
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F QV+IDE+ Q E +IPL G K+ ++VGD QL P ++ + AA QSLF R+
Sbjct: 1535 FDQVIIDEACQCLELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQ 1594
Query: 612 LLGLKPI-RLQVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPN 665
+ L VQYRMHP +S+FPS+ FY L++G + +N R PW P
Sbjct: 1595 KNHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTR-------PWHKDPPL 1647
Query: 666 RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR---SGVVPSQIGVITPYEGQR 722
P F+ +G+ E + S N EA ++ ++ +IG+I+PY+ Q
Sbjct: 1648 TPYRFFDILGKHEKNELTRSLFNTDEAIVALQLTDKLMQLLPQDKFSGKIGIISPYKEQI 1707
Query: 723 AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
I R + + EI+ +VD FQG+EK+ II+SCVR++ +GFL+D RR+N
Sbjct: 1708 RKIKEVFVRKYG--KPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMN 1765
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG---------PLNNLKQS-- 831
VALTRA+ + ILGN LS+ +W LLT E C+ + P + LK+
Sbjct: 1766 VALTRAKTTLWILGNKDSLSRNEVWKKLLTDAGERNCITQAYPGFLNPSNPNSGLKRKEE 1825
Query: 832 ------MVQFQKPKKIYND-------------RRLFFGAGPGIVPNDISTSNPN------ 866
+F K +K+ N+ + + G++P+ +SN N
Sbjct: 1826 NVFTPQQTKFAKKQKVSNESERNVHKIRNNLTKPTYRPTNAGVLPSKSKSSNGNNKPDYS 1885
Query: 867 ADRRGSRARGYMPPGPPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGP 926
A+ S A+ N T P P + P QG P + P G + P
Sbjct: 1886 ANNLQSSAKQSNKDTKSNTTDDA-------PKPYINQPKPQGDPKNGP---TRSGTISKP 1935
Query: 927 VGAVHHVPPPGSRG 940
+ P P S G
Sbjct: 1936 --STTSTPAPTSSG 1947
>gi|124009432|ref|ZP_01694109.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
gi|123984980|gb|EAY24938.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
Length = 649
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 165/530 (31%), Positives = 270/530 (50%), Gaps = 47/530 (8%)
Query: 321 VPVDINHG-FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTL 379
+P + +G +D ++ + ++ M A++ E + L+G + + ++ L
Sbjct: 115 LPEWVEYGTLGIDLLFDAVTYKEMDAAVRKVVSSEDPRVIELRDVLIGKKKARFLDKSEL 174
Query: 380 PRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVL 438
P + + LN SQ AV+++L+ + +++I GPPGTGKT T A V + Q + QVL
Sbjct: 175 PDYYE---VATLNESQNEAVQNILRAQDVAIIHGPPGTGKTTTMVAAV-KLTLQQEKQVL 230
Query: 439 VCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTS------ 491
V APSN AVD L +++ A G+ V+R+ +R V+ + +L Q+ +H D
Sbjct: 231 VTAPSNTAVDLLTKRLLAKGVSVIRVGNPAR--VNEDLIPFSLESQIAQHPDYKLLKKIR 288
Query: 492 -EKSELHKLQ--------QLKDEQGELSSSDEKKYKALKRATEREISQS----ADVICCT 538
+ E K+ + + EQ +L ++ K K A E+ I S V+ T
Sbjct: 289 RDADEYKKMAAKYKRNFGKEEREQRKLMFAEASKLKHEAYALEKYIVDSLLNNTQVVTAT 348
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
VG+ + + RF V IDE+ QA EP C IPL L +++VV GDHCQL P I AA
Sbjct: 349 LVGSVNKFIRYRRFSTVFIDEAGQALEPACWIPL-LKSERVVFAGDHCQLPPTIKSFDAA 407
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI-NERQSSGI 657
+ GL ++LFE+++ + L+ QYRMH + +F + FY+G L T+ N R +
Sbjct: 408 KGGLTETLFEQVIKKQAVDVMLKTQYRMHEHIMQFSNKEFYQGELLAADTVVNHRLFAHA 467
Query: 658 DFPWPVPNRPMFFYVQMG---QEEISASGTSYLNRTEAANVEK----IVTTF-------L 703
D + N+P+ F G +E+ A S N EA + K + T L
Sbjct: 468 DLQGEMINQPVEFIDTAGCGFEEKTMAETGSKYNPDEAGILLKHWIQLATQLQLAEPDML 527
Query: 704 RSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSC 763
+ G + G+I+PY+ Q ++ + + L ++ ++ S+D FQG+E+D + +S
Sbjct: 528 KEGWFSA--GIISPYQAQVKHLKELFAEHPDL-TEVAPWTDINSIDGFQGQERDVVYISM 584
Query: 764 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
VRSN+ IGFL D RR+NVALTRAR +V++G+ L + + L +
Sbjct: 585 VRSNDKGKIGFLEDTRRMNVALTRARKKLVVIGDSGTLGQNAFYQHFLDY 634
>gi|238880881|gb|EEQ44519.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 2018
Score = 219 bits (557), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 252/523 (48%), Gaps = 103/523 (19%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-YHMAKQ---------------- 432
+N SQ A+ + SLIQGPPGTGKT T IV Y ++++
Sbjct: 1297 VNDSQARAIMGTFKSEGFSLIQGPPGTGKTKTILGIVGYSLSQEKNNKVIDISGSGSSPT 1356
Query: 433 --GQGQVLVCAPSNVAVDQLAEKI-----SATG----LKVVRLCAKSREAVSSPVEHLTL 481
+ ++L+CAPSN AVD+L ++ +++G LKVVRL +A++S V LTL
Sbjct: 1357 PSDKAKILICAPSNAAVDELVLRLRDGVRNSSGEHMPLKVVRL--GRSDAINSSVRDLTL 1414
Query: 482 HYQV-RHLDT-------------------SEKSELHK----------------------- 498
V + L T +E+ EL K
Sbjct: 1415 EELVDKELQTKQTEVVIDPNIRLEHTKCINERDELRKRLATESLEEKEITELEEKIRAIN 1474
Query: 499 -----LQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--R 551
L + DEQ E +S + + +R + I A V+C T G+ +AN +
Sbjct: 1475 KKRSELAKKLDEQREKASIANRTKEINRRNIQARILSEAQVLCSTLSGSAHDLVANLSVQ 1534
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F QV+IDE+ Q E +IPL G K+ ++VGD QL P ++ + AA QSLF R+
Sbjct: 1535 FDQVIIDEACQCLELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQ 1594
Query: 612 LLGLKPI-RLQVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPN 665
+ L VQYRMHP +S+FPS+ FY L++G + +N R PW P
Sbjct: 1595 KNHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTR-------PWHKDPPL 1647
Query: 666 RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS-----QIGVITPYEG 720
P F+ +G+ E + S N EA ++ ++ ++P +IG+I+PY+
Sbjct: 1648 TPYRFFDILGKHEKNELTRSLFNTDEAIVALQLTDKLMQ--LLPQDRFSGKIGIISPYKE 1705
Query: 721 QRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
Q I R + + EI+ +VD FQG+EK+ II+SCVR++ +GFL+D RR
Sbjct: 1706 QIRKIKEVFVRKYG--KPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRR 1763
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG 823
+NVALTRA+ + ILGN LS+ +W LLT E C+ +
Sbjct: 1764 MNVALTRAKTTLWILGNKDSLSRNEVWKKLLTDAGERNCITQA 1806
>gi|389738890|gb|EIM80085.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 806
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 253/543 (46%), Gaps = 99/543 (18%)
Query: 358 SGYIYHHLLGHEV------------EVQMVRNTLPRRF---------GAPGLPELNASQV 396
+ Y+ H LL HE + M + RR+ G P L LN +Q+
Sbjct: 193 TNYVPHSLLEHEARHRAPGDHGGAFKDDMRIQSWTRRYMRVNPVRVEGDPVLEGLNKTQL 252
Query: 397 FAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCAPSNVAVDQLAEKI 454
AV ++ SLIQGPPGTGKT T V + Q ++VC +NVAVD L E +
Sbjct: 253 RAVALMIGERASLIQGPPGTGKTKTIIETVKLLKVHFQVPHPIMVCTYTNVAVDNLVEGL 312
Query: 455 SATGLKVVRLCAKSR-------EAVSSPVEHLTLHYQVRHLDTSEKSELHKL-----QQL 502
+A+G+K +R+ + + S +E+ L + L T E L K +++
Sbjct: 313 AASGVKPLRVGYGGKVKKSLYPHTLESKLENHALRPEFERL-TQEGEHLRKRSGALQKKI 371
Query: 503 KDEQGELSSSDE------------------------------KKYKALKRATEREISQSA 532
++ + S DE K A+++ +I A
Sbjct: 372 RELSKKADSGDEGGAAVTRARRMLERAEMEGITLERQENILRSKLYAVRQEMLHDIVAQA 431
Query: 533 DVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVI 592
DV+C TC+ + L F V +DE++ +TEP LIP++ G++ + L+GDH QL PVI
Sbjct: 432 DVVCTTCITSASAALRIIDFPVVFLDEASMSTEPASLIPIMKGSRHLALIGDHKQLPPVI 491
Query: 593 MCKKAARAGLAQSLFERLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNGV---T 648
++A GL SLFERL G P I L +QYRMHPS+S FPS FY +L +G +
Sbjct: 492 TSREAQVKGLGISLFERLTEEGDVPSIMLDLQYRMHPSISRFPSEEFYNFSLLDGTVDAS 551
Query: 649 INERQ------SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF 702
N R SS + RP +V +E S+ S +N EA V KIV
Sbjct: 552 GNVRSSLLPPTSSHLVLDPNTGKRPSVVFVDHSGQE-SSRDRSKVNWEEAGIVVKIVEDL 610
Query: 703 LRSG--VVPSQIGVITPYEGQRAYIVNY--------------------MSRNGALRQQLY 740
L S + IG+I PY Q + + + +S G+ R
Sbjct: 611 LLSNPDLKGENIGIIAPYVAQISLLTRFLHTSTSSPSPSTSSPWSTHLLSTLGSHRCMQL 670
Query: 741 KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKV 800
IE+ +VD F+GREKD II S VR+N+ IGFL D RRLNV LTRA+ G+ ++G+ +
Sbjct: 671 PSIEIKTVDGFEGREKDIIIFSTVRNNDLGQIGFLADRRRLNVGLTRAKRGLFVVGSLRT 730
Query: 801 LSK 803
L +
Sbjct: 731 LRE 733
>gi|153007203|ref|YP_001381528.1| superfamily I DNA/RNA helicase [Anaeromyxobacter sp. Fw109-5]
gi|152030776|gb|ABS28544.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. Fw109-5]
Length = 651
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 224/429 (52%), Gaps = 34/429 (7%)
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
++L+ GPPGTGKT ++ +G+ +VL APSN+AVD L E+++A G++ VR+
Sbjct: 221 LALVHGPPGTGKTTVLVEVIRRAVARGE-KVLATAPSNLAVDNLVERLAAAGVRCVRVGH 279
Query: 467 KSR---EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQ------GELSSSDEKKY 517
+R +S +E LT ++ + E L++ + G S+S E++
Sbjct: 280 PARVLPAVLSHTLEALTESHEAARIARGLVEEAIALRRSAARRRQKRGPGRFSASREQER 339
Query: 518 KA---------LKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
A L+ E E+ A+V+ T G P LA RF + DE+TQA EP
Sbjct: 340 DARALFAEARTLEARAEGEVLDRAEVVLSTLTGLDAPPLARRRFTLAVADEATQAVEPAL 399
Query: 569 LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQV--QYRM 626
+ L L A++ VL GDH QL P ++ A GL SLFERLV L I++ + Q+RM
Sbjct: 400 YLAL-LRAERAVLAGDHLQLPPTVLSGAAQAGGLGVSLFERLVALHGDAIKVTLAEQHRM 458
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
+ + FPS + Y G L+ + ER G P V + + +EE S
Sbjct: 459 NARIMAFPSEALYGGALRAHPAVAERAIDGA--PLEVVDTAGRGF----EEETPEGSDSK 512
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EAA V V L G+ P+++ VI+PY+ Q + ++ L + +EV
Sbjct: 513 QNAGEAALVAGEVEALLAQGLDPAEVAVISPYDAQVQRLRQLLA------AHLDRGLEVD 566
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD FQGREKD +++S VR+NE +GFL D RR+NVALTRAR +V++G+ +++ P
Sbjct: 567 TVDGFQGREKDAVVVSLVRANETGEVGFLADVRRMNVALTRARMKLVVVGDGATVARHPF 626
Query: 807 WNGLLTHYK 815
+ L+H +
Sbjct: 627 YARFLSHAE 635
>gi|118368904|ref|XP_001017658.1| hypothetical protein TTHERM_00339940 [Tetrahymena thermophila]
gi|89299425|gb|EAR97413.1| hypothetical protein TTHERM_00339940 [Tetrahymena thermophila
SB210]
Length = 676
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 234/451 (51%), Gaps = 38/451 (8%)
Query: 390 ELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
+LN Q A+ L + I LI GPPGTGKT+T ++Y K G +VL CA SN+AVD
Sbjct: 235 DLNEEQKDAINFCLSSQTIGLIHGPPGTGKTMTVCELIYQAVKMGL-RVLACAGSNIAVD 293
Query: 449 QLAEKISATGLKVVRLCAKSR-------EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 501
+ E+++ T LKV+R+ +R + + + + T +++ L + +L KLQ+
Sbjct: 294 NMVERLAKTDLKVMRIGHPARMLPTIYEQCLDNKLRKTTCFKELKALKQNINKQLQKLQK 353
Query: 502 -----LKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGD----PRLANFRF 552
K E +L + K+ + ++ + +E+ Q V+CCT GA D F
Sbjct: 354 DISYGEKKEIKKLLTELRKEMREQEQLSIKEVIQDTQVVCCTNSGAADYIFKRDFGKVEF 413
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 612
V+IDE QA E C IP++LG K+VVL GDH QL P I K+ GL+ +LF+R VL
Sbjct: 414 DLVVIDECAQALELSCWIPILLG-KRVVLAGDHKQLPPTI---KSKNQGLSVTLFDR-VL 468
Query: 613 LGLKPIR----LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
+P L+VQYRM+ + E+ S Y G L+ ++ G +
Sbjct: 469 KEFQPENVSRLLKVQYRMNQQIMEWSSQYVYGGQLKAHESVATHSIGGESILLFIDTAG- 527
Query: 669 FFYVQMGQ---EEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYI 725
+MG+ E + S N EA V+ I G+ ++GVITPY Q I
Sbjct: 528 ---AKMGETINENANDKNKSKSNLGEADLVKIIFEELKLQGLQEKEVGVITPYNAQVDLI 584
Query: 726 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
N QQ +EV++VD FQGREK+ II+S VRSN +GFL+D RR+NVA+
Sbjct: 585 KKLFENNNINTQQ----VEVSTVDGFQGREKECIIISMVRSNPLNQVGFLSDYRRMNVAV 640
Query: 786 TRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
TRAR + ++G+ + +S + ++ +++E
Sbjct: 641 TRARKFVCLIGDSETVSSDKFLDEMVKYFQE 671
>gi|302308150|ref|NP_984975.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|299789319|gb|AAS52799.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|374108198|gb|AEY97105.1| FAER115Wp [Ashbya gossypii FDAG1]
Length = 2027
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 188/606 (31%), Positives = 280/606 (46%), Gaps = 132/606 (21%)
Query: 390 ELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIV---------------------- 426
+LN SQ AV SV + SLIQGPPGTGKT T +V
Sbjct: 1306 KLNTSQAKAVISSVKKLGFSLIQGPPGTGKTKTILGVVGFFLTTAKALPSNVIRNPTESN 1365
Query: 427 ---YHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVS 473
M Q Q +VL+CAPSN AVD+L ++ GL K+VR+ KS +AV+
Sbjct: 1366 ATSTEMLLQKQ-KVLICAPSNAAVDELVLRLRE-GLVDTDGKLFKPKLVRI-GKS-DAVN 1421
Query: 474 SPVEHLTLH-----------YQVRH--------------------------------LDT 490
+ + LTL Y++ H L T
Sbjct: 1422 AAIRDLTLEELVDKRALNQSYEINHDPNLDQSFHDAVAERRKLRDMMNKEDGSPTSKLST 1481
Query: 491 SEKSELH--------KLQQLKDEQGELSSSDEKKYKAL---KRATEREISQSADVICCTC 539
E S++ K+ +L ++ EL + Y+ KR + I +D+IC T
Sbjct: 1482 DEISKIQLKLRDLSKKINELGKQRDELRERNAVNYRNRELNKRKAQARILAESDIICSTL 1541
Query: 540 VGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
G+ LA+ +F V++DE+ Q TE +IPL G K+ ++VGD QL P ++ A
Sbjct: 1542 SGSAHDVLASLGVKFDTVIVDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAA 1601
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
+ QSLF R+ KP L VQYRMH +S FPS FY+G L+NG +++ +
Sbjct: 1602 SNFKYNQSLFVRMEK-NCKPHLLDVQYRMHSMISAFPSLEFYDGRLKNGPNMDQVNTR-- 1658
Query: 658 DFPW--PVPNRPM-FFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPS 710
PW P P FF + G+++ +A SY+N E ++K+++ + +
Sbjct: 1659 --PWHESQPFGPYRFFDIITGKQQQNAKTMSYVNYDECQVSIEMIDKLLSQYEKKVDFSG 1716
Query: 711 QIGVITPYEGQRAYIVNYMSRNGALRQ----QLYKEIEVASVDSFQGREKDYIILSCVRS 766
+IG+I+PY Q + M R A R ++K I+ ++D FQG+EK+ II+SCVR+
Sbjct: 1717 KIGIISPYREQ----MQMMKR--AFRSYFGGTIFKYIDFNTIDGFQGQEKEIIIISCVRA 1770
Query: 767 NEHQG-IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL----- 820
++ +G +GFL D RR+NVALTRA+ + ILG+ K L K LW L++ K +CL
Sbjct: 1771 DDSKGGVGFLKDFRRMNVALTRAKASLWILGHHKSLYKNKLWMHLISDAKGRDCLQMACP 1830
Query: 821 -VEGPLNNLKQSMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMP 879
P N Q + K Y + +G P + + R SR R +M
Sbjct: 1831 GFLDPRNRAAQDALHRFKNHHNYIENADDYGPEPVM-------TKSRGRNRSSRKRKHME 1883
Query: 880 PGPPNG 885
P +
Sbjct: 1884 DNPDDN 1889
>gi|255036839|ref|YP_003087460.1| type III restriction protein res subunit [Dyadobacter fermentans
DSM 18053]
gi|254949595|gb|ACT94295.1| type III restriction protein res subunit [Dyadobacter fermentans
DSM 18053]
Length = 636
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 266/519 (51%), Gaps = 54/519 (10%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTF-AVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPG 387
+D ++ S+D MQ A+KT ++ + G++ L G + + +
Sbjct: 122 LGIDLLFDDNSYDEMQSALKTADSLGSSDKEGHLIKVLTGEKAP------SFDKDIYPIT 175
Query: 388 LPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVA 446
LP+LN SQ AV+++L + ++++ GPPGTGKT T + + K+ +LV APSN A
Sbjct: 176 LPKLNPSQQRAVQNILSAQELAIVHGPPGTGKTTTLVQAIKALVKKDNRPILVVAPSNTA 235
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTL------HYQVRHLDTSEKSE----- 495
VD L+EK+S GL V+R+ R VS + LTL H V+ + T +K
Sbjct: 236 VDLLSEKLSEEGLNVLRVGNPVR--VSERLTALTLDSKMSSHASVKDIKTLKKQANEYKN 293
Query: 496 -LHKLQQL--KDEQGELSSSDEKKYKALKRATERE------ISQSADVICCTCVGAGDPR 546
HK ++ K E+ + + ++ ++ +K E + V+ T VG+
Sbjct: 294 MAHKYKRHFGKAERDQRKALFDEAHRIMKDVANMEQYIIDDLLTKTQVVTATLVGSNHFT 353
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
+ N ++R V+IDE+ QA EP C IP +L A++VV GDH QL P I ++AA+ GL+ +L
Sbjct: 354 VRNMKYRTVVIDEAGQALEPACWIP-ILKAEKVVFAGDHLQLPPTIKSEEAAKGGLSTTL 412
Query: 607 FERLVLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV 663
E+ V L P + L+ QYRM+ ++ + S FY L+ ++ R + FP
Sbjct: 413 LEKCV--ALHPESVVLLEEQYRMNEAIMGYSSKVFYHDKLKAHESVAGR----VLFPGEA 466
Query: 664 PNRPMFFYVQMG-QEEISASGTSYLNRTEAA----NVEKIVTTFLRSGVVPSQ---IGVI 715
P + F G + GTS N EAA ++ ++ F + P I +I
Sbjct: 467 P---LAFVDTAGCGFDDKLEGTSSTNPEEAAFLFKHLTQLAAEFAKVNPKPESFPSIAII 523
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLY-KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
+PY+ Q + N ++ L QLY +I V ++DSFQG+E+D + +S R+N IGF
Sbjct: 524 SPYKEQINILKNLLAHAPHL--QLYLDKIAVNTIDSFQGQERDVVYISMTRNNIEGQIGF 581
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
L D RR+NVA+TRAR +V++G+ LS P + + +
Sbjct: 582 LADIRRMNVAMTRARKKLVVIGDSATLSVLPFYENFIAY 620
>gi|320036907|gb|EFW18845.1| tRNA-splicing endonuclease [Coccidioides posadasii str. Silveira]
Length = 1086
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 175/572 (30%), Positives = 269/572 (47%), Gaps = 119/572 (20%)
Query: 387 GLPELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM---------------- 429
G +LN +Q AVKS + +LIQGPPG+GKT T A+V +
Sbjct: 237 GTYDLNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPG 296
Query: 430 ---AKQGQGQVLVCAPSNVAVDQLAEKIS---------ATGLKVVRLCAKSREAVSSPVE 477
A+ ++LVCAPSN AVD+L + A + V+RL +A+++ V
Sbjct: 297 DKTARTLAKKLLVCAPSNAAVDELVMRFKEGVKTLQGRAQKISVLRLGRS--DAINTNVL 354
Query: 478 HLTLHYQV----------------------RHLDTSEK-------------------SEL 496
+TL +V H D+S K +EL
Sbjct: 355 DVTLDERVNAKLSEIGQKNGSERDLHSLYTEHKDSSNKFNEIRERMDQCRAKAQGLPAEL 414
Query: 497 HK-LQQLKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTCVGAGDP 545
+ LK ++ +LS S+ +K A +R ++EI A VIC T G+G
Sbjct: 415 EREFDLLKKKKAQLSQAIDSARDKSQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHE 474
Query: 546 RLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K+A+R
Sbjct: 475 MFQTLSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYE 534
Query: 604 QSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
QSLF R+ + + L QYRMHP +S FPS +FY+G LQ+G ++ + + PW
Sbjct: 535 QSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPSMAKLRIR----PWH 590
Query: 663 VPNR--PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR---SGVVPSQIGVITP 717
P F+ G + G S +N E ++ ++ + +IG+ITP
Sbjct: 591 STELLGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITP 650
Query: 718 YEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
Y+GQ R ++ ++ G ++K +E + D+FQGRE + II SCVR++ H GIGFL
Sbjct: 651 YKGQLRELKQHFANKYG---NAIFKAVEFNTTDAFQGRECEVIIFSCVRASNH-GIGFLA 706
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
D RR+NV LTRA+ + +LGN + L++ W GL+ +E + +G + + QS
Sbjct: 707 DIRRMNVGLTRAKSSLWVLGNSQSLARGEFWRGLINDARERQLYTDGDVYKILQS----- 761
Query: 837 KPKKIYNDRRLFFGAGPGIVPNDISTSNPNAD 868
P++ +VPNDI ++ + D
Sbjct: 762 -PQR-------------SLVPNDIEMTDGSMD 779
>gi|350637189|gb|EHA25547.1| hypothetical protein ASPNIDRAFT_42089 [Aspergillus niger ATCC 1015]
Length = 2051
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 259/536 (48%), Gaps = 107/536 (19%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM------------------AK 431
+N++Q A+KS L +LIQGPPG+GKT T A+V + AK
Sbjct: 1288 VNSAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSNVLGNQGVAISRPMGNAK 1347
Query: 432 QGQG------QVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSPV 476
G ++LVCAPSN AVD+L + L V+RL +A+++ V
Sbjct: 1348 PAGGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRQEKLSVIRL--GRSDAINTNV 1405
Query: 477 EHLTL------------------------HYQVRHLDTSEKSELHKLQQ----------- 501
+TL + + + DT+ K ++ Q
Sbjct: 1406 LDVTLDELVNARLNQTARKDPGERDLQKIYMEHKAADTAFKETRARMDQCRAQGLPVPAE 1465
Query: 502 -------LKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTCVGAGD 544
LK ++ +LS S+ +K + A +R ++EI A VIC T G+G
Sbjct: 1466 LEREFDLLKKKKTQLSQEIDSARDKNHSAARDAELTRRRIQQEIIDGAHVICATLSGSGH 1525
Query: 545 PRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1526 EMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQY 1585
Query: 603 AQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
QSLF R+ + + L +QYRMHP +S FPS++FY+G LQ+G + + + PW
Sbjct: 1586 EQSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVR----PW 1641
Query: 662 PVPN--RPMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGVI 715
P F+ G + +A G S +N R E++VT F R+ +IG+I
Sbjct: 1642 HQSELLSPYRFFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDF-RAFNFDRKIGII 1700
Query: 716 TPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
TPY+GQ R + +R G +++ +I+ + D+FQGRE + II SCVR++ ++GIGF
Sbjct: 1701 TPYKGQLRELKTQFAARYG---NEIFNKIDFNTTDAFQGRESEVIIFSCVRAS-NKGIGF 1756
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
L D RR+NV LTRA+ + +LGN + L + WNGL+ + +G + + Q
Sbjct: 1757 LADIRRMNVGLTRAKSSLWVLGNSQALVQGEFWNGLIKDARRRNVYTDGDVLKILQ 1812
>gi|156838553|ref|XP_001642980.1| hypothetical protein Kpol_1046p14 [Vanderwaltozyma polyspora DSM
70294]
gi|156113564|gb|EDO15122.1| hypothetical protein Kpol_1046p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 1115
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 245/466 (52%), Gaps = 73/466 (15%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVDQ 449
LN SQ A++ VL I+++QGPPGTGKT T I+ M + ++C A SN+A+D
Sbjct: 641 LNESQRSAIQHVLNNHITVLQGPPGTGKTSTIEEIIIQMIENFHSFPILCVAASNIAIDN 700
Query: 450 LAEK--ISATGLKVVRLCAKSRE---AVSSPVEHLTLHYQV-RHLDTSEKSELHKLQQLK 503
+AEK ++ +K++R+ ++ +E + P+ + LH V L K L KL+
Sbjct: 701 IAEKFLLNRPNIKILRIVSEGKEPQYGPNHPLGKICLHNIVNEQLPDQMKQNLRKLRS-- 758
Query: 504 DEQGELSSSDEKKYKALKRA----TEREISQSADVICCTCVGAGDPRLANFR-FRQVLID 558
G ++ + + L +R +SQ A +I T + AG +L + + V++D
Sbjct: 759 ---GRINDISKNQINKLSTQQTTIADRYVSQ-AQIIFTTNIAAGGRQLKSIKELPVVIMD 814
Query: 559 ESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG--L 615
ESTQ++E L+PL L G + V VGD QL + L SLFER++L G
Sbjct: 815 ESTQSSEAATLVPLSLPGLRTFVFVGDEKQLSSF-----SNVPQLEMSLFERVLLNGSYK 869
Query: 616 KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY-VQM 674
KP L QYRMHPS+S+FP +FY G L++GVTI +++ GI + P+FFY
Sbjct: 870 KPHMLDTQYRMHPSISKFPIKAFYNGELKDGVTIKDKEFPGIKY-------PLFFYNCNK 922
Query: 675 GQE-----EISAS-GTSYLNRTEAANVEKIVTTF-LRSGVVPSQIGVITPYEGQRAYIVN 727
G+E ++ S G +Y N +EA + KI+ L V +IG+ITPY QR + N
Sbjct: 923 GREGKVFNKVRGSAGFTYNNISEAREIVKILYKLILDKNVQRDEIGIITPYSAQRDLLSN 982
Query: 728 YMSRNGALRQ------QLYKEIE--------------------------VASVDSFQGRE 755
+ + + Q + EI+ V+++DSFQG E
Sbjct: 983 LLVNDSVINPEKVEMFQDFDEIDLLNSKASGNTLEGPKVNTINIINGIFVSTIDSFQGHE 1042
Query: 756 KDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
K +II SCVR+N IGF++D RR+NVALTRA+ G++I+GN V+
Sbjct: 1043 KKFIIFSCVRNNPENKIGFVSDKRRMNVALTRAKNGLIIVGNKDVM 1088
>gi|145247364|ref|XP_001395931.1| tRNA-splicing endonuclease [Aspergillus niger CBS 513.88]
gi|134080665|emb|CAK41330.1| unnamed protein product [Aspergillus niger]
Length = 2116
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 259/536 (48%), Gaps = 107/536 (19%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM------------------AK 431
+N++Q A+KS L +LIQGPPG+GKT T A+V + AK
Sbjct: 1288 VNSAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSNVLGNQGVAISRPMGNAK 1347
Query: 432 QGQG------QVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSPV 476
G ++LVCAPSN AVD+L + L V+RL +A+++ V
Sbjct: 1348 PAGGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRQEKLSVIRLGRS--DAINTNV 1405
Query: 477 EHLTL------------------------HYQVRHLDTSEKSELHKLQQ----------- 501
+TL + + + DT+ K ++ Q
Sbjct: 1406 LDVTLDELVNARLNQTARKDPGERDLQKIYMEHKAADTAFKETRARMDQCRAQGLPVPAE 1465
Query: 502 -------LKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTCVGAGD 544
LK ++ +LS S+ +K + A +R ++EI A VIC T G+G
Sbjct: 1466 LEREFDLLKKKKTQLSQEIDSARDKNHSAARDAELTRRRIQQEIIDGAHVICATLSGSGH 1525
Query: 545 PRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1526 EMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQY 1585
Query: 603 AQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
QSLF R+ + + L +QYRMHP +S FPS++FY+G LQ+G + + + PW
Sbjct: 1586 EQSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVR----PW 1641
Query: 662 PVPN--RPMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGVI 715
P F+ G + +A G S +N R E++VT F R+ +IG+I
Sbjct: 1642 HQSELLSPYRFFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDF-RAFNFDRKIGII 1700
Query: 716 TPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
TPY+GQ R + +R G +++ +I+ + D+FQGRE + II SCVR++ ++GIGF
Sbjct: 1701 TPYKGQLRELKTQFAARYG---NEIFNKIDFNTTDAFQGRESEVIIFSCVRAS-NKGIGF 1756
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
L D RR+NV LTRA+ + +LGN + L + WNGL+ + +G + + Q
Sbjct: 1757 LADIRRMNVGLTRAKSSLWVLGNSQALVQGEFWNGLIKDARRRNVYTDGDVLKILQ 1812
>gi|302771055|ref|XP_002968946.1| hypothetical protein SELMODRAFT_90782 [Selaginella moellendorffii]
gi|300163451|gb|EFJ30062.1| hypothetical protein SELMODRAFT_90782 [Selaginella moellendorffii]
Length = 827
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 191/618 (30%), Positives = 296/618 (47%), Gaps = 64/618 (10%)
Query: 257 GLNKKRVAYFVFPKEDNEL---RLVPGDELRLRYSGDAAHPAWQSV-GHVIKLTAQE--- 309
GL V F N L L PGD + +R S PA + + G V KL
Sbjct: 206 GLGGTEVVSFRSKNSQNRLPPTSLSPGDMVCVRVSNRQGIPATECLRGSVYKLCEDGQFI 265
Query: 310 EVAL-----ELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTF---AVDETSVSGYI 361
EVAL L G + I+ F + +T+++R A+K AV + + + I
Sbjct: 266 EVALPGGGRALMKLSGRSIRIDKIFDL---ANATTYERNCEALKQLKKVAVSKDNPAAAI 322
Query: 362 YHHLLGHEVEVQ-------MVRNTLPRRFGAPGLPELNASQVFAVKSVLQ--RPISLIQG 412
L G E++ + +T + SQ A++ L RP+++IQG
Sbjct: 323 AAVLFGQGEEIEKLARGKDQLEDTHSLLASTLSGASFDKSQRRAIQLGLDKSRPVAVIQG 382
Query: 413 PPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR--- 469
PPGTGKT I+ +G +VL AP+N AVD L +++S T L+VVR+ R
Sbjct: 383 PPGTGKTNVVTEIIIQAVARGD-KVLATAPTNAAVDNLVDRLSDTSLRVVRVGNPVRMSP 441
Query: 470 EAVSSPVEHLTLHYQV--RHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE 527
VS + H+ V + S+K+ L + ++ + G++ + +K + L ++ +++
Sbjct: 442 SVVSKSLTHIVSSELVDFKRSIASDKAALRR-ASMRCQDGKIKAEIDKNLRRLDKSVKKK 500
Query: 528 -------ISQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQATEPECLIPLVLGAKQV 579
+ +A V+ CT +GAGDP L F ++DE+ QA EP C I +L + +V
Sbjct: 501 EEEIPVGVLAAAQVVLCTSIGAGDPLLRKTGLFDLAVVDEAGQAMEPSCWIG-ILRSSRV 559
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERL-VLLGLKPIR---LQVQYRMHPSLSEFPS 635
VL GD CQL P + +A GLA SL ER LG + LQVQYRM+ +++ + S
Sbjct: 560 VLAGDACQLAPTVFSAEAVDGGLATSLMERASTSLGHSAVMNTMLQVQYRMNEAIASWAS 619
Query: 636 NSFYEGTLQNGVTINER---QSSGIDFPWP-------VPNRPMFFYVQMGQEE-ISASGT 684
+ Y G ++ ++ ++ S + W + R F + MG EE + GT
Sbjct: 620 SEMYGGLVKTAPSVAKQVLSDSPQVKETWRTRAAMLLLDTRKAFGSLAMGCEECMDYLGT 679
Query: 685 -SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S+ N EA V + V + SGV S I V +PY Q ++ R + L +
Sbjct: 680 GSFYNDGEADIVVEHVKALIHSGVPASSIAVQSPYLAQ-----VHLLRARLDEESLGDIV 734
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+ S+DSFQGRE D +++S VRSNE +GFL D RR+NVA+TR+R + I+ + +
Sbjct: 735 QTESIDSFQGREADAVVISMVRSNELGVVGFLADKRRINVAVTRSRKHVAIVCDSSTVGS 794
Query: 804 QPLWNGLLTHYKEHECLV 821
P LL H + H +V
Sbjct: 795 NPFLRRLLQHIRAHGIVV 812
>gi|19115031|ref|NP_594119.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe 972h-]
gi|2842700|sp|Q92355.1|SEN1_SCHPO RecName: Full=Helicase sen1
gi|1644322|emb|CAB03612.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe]
Length = 1687
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 264/578 (45%), Gaps = 117/578 (20%)
Query: 347 MKTFAVDETSVSGYIYHHLLGHEVEV----QMVRNTLPRRFGAPGLPELNASQVFAVKSV 402
+ TF + G Y HL + Q V+++ A ++N Q A+
Sbjct: 1082 LATFTRQYAGIRGLPYFHLADDIIRARPCSQPVKHSSSEIKAAMKRYQVNEPQAKAIMCA 1141
Query: 403 LQRP-ISLIQGPPGTGKTVTSAAIV---------YHMAK--------QGQGQVLVCAPSN 444
L +LIQGPPGTGKT T I+ YH+ + + + Q+L+CAPSN
Sbjct: 1142 LDNNGFTLIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQQSKSTESKQQILLCAPSN 1201
Query: 445 VAVDQLAEKISATGL---------KVVRLCAKSREAVSSPVEHLTLHYQVRH-------- 487
AVD++ ++ L +VVR+ + E ++ V L+L YQ
Sbjct: 1202 AAVDEVLLRLKRGFLLENGEKYIPRVVRI--GNPETINVSVRDLSLEYQTEKQLLEVNQG 1259
Query: 488 -LDTSEKSEL-----------HKLQQL------------------KDEQGEL-------- 509
+D EL K+++L K+ Q ++
Sbjct: 1260 AIDLGSLQELTRWRDTFYDCIQKIEELEKQIDVARDVAEDTKSLGKELQNKINEKNLAEQ 1319
Query: 510 --------SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLA--NFRFRQVLIDE 559
S + K+ L++ ++ I + ADV+C T G+G +A + F V+IDE
Sbjct: 1320 KVEELQSQSFTKNKEVDLLRKKAQKAILKQADVVCATLSGSGHDLVAHSSLNFSTVIIDE 1379
Query: 560 STQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL-LGLKPI 618
+ QA E + +IPL GAK+ +LVGD QL P ++ KKAA +QSLF R+ +
Sbjct: 1380 AAQAVELDTIIPLRYGAKKCILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQKNFSNQMC 1439
Query: 619 RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQM---- 674
L +QYRMHP +S FPS FY+ L++G + E+ W V P F ++
Sbjct: 1440 LLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKTQQ----VWHV--NPKFTQYRLFDVR 1493
Query: 675 GQEEISASGTSYLNRTEAANVEKIVTTFLRSG---VVPSQIGVITPYEGQ-----RAYIV 726
G+E S + ++Y N E + +V L +IGVITPY Q RA+ V
Sbjct: 1494 GKERTSNTMSTY-NLEEVEYLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHELRRAFKV 1552
Query: 727 NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 786
Y + I++ +VD FQG+EKD I SCV+S GIGFL D RRLNVALT
Sbjct: 1553 KY-------GKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALT 1605
Query: 787 RARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGP 824
RAR ++I+GN + L LW L+ + LVE P
Sbjct: 1606 RARSSLLIIGNMETLKTDDLWGSLVDDALSRK-LVESP 1642
>gi|119181373|ref|XP_001241901.1| hypothetical protein CIMG_05797 [Coccidioides immitis RS]
Length = 2066
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 176/572 (30%), Positives = 268/572 (46%), Gaps = 119/572 (20%)
Query: 387 GLPELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM---------------- 429
G +LN +Q AVKS + +LIQGPPG+GKT T A+V +
Sbjct: 1217 GTYDLNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPG 1276
Query: 430 ---AKQGQGQVLVCAPSNVAVDQLAEKIS---------ATGLKVVRLCAKSREAVSSPVE 477
A+ ++LVCAPSN AVD+L + A + V+RL +A+++ V
Sbjct: 1277 DKTARTLAKKLLVCAPSNAAVDELVMRFKEGVKTLQGRAQKISVLRL--GRSDAINTNVL 1334
Query: 478 HLTLHYQV----------------------RHLDTSEK-------------------SEL 496
+TL +V H DTS K +EL
Sbjct: 1335 DVTLDERVNAKLSEIGQKNGSERDLQSLYTEHKDTSNKFNEIRERMDQCRAKAQALPAEL 1394
Query: 497 HK-LQQLKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTCVGAGDP 545
+ LK ++ +LS S+ +K A +R ++EI A VIC T G+G
Sbjct: 1395 EREFDLLKKKKAQLSQAIDSARDKNQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHE 1454
Query: 546 RLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K+A+R
Sbjct: 1455 MFQTLSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYE 1514
Query: 604 QSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
QSLF R+ + + L QYRMHP +S FPS +FY+G LQ+G + + + PW
Sbjct: 1515 QSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRIR----PWH 1570
Query: 663 VPNR--PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR---SGVVPSQIGVITP 717
P F+ G + G S +N E ++ ++ + +IG+ITP
Sbjct: 1571 NTELLGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITP 1630
Query: 718 YEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
Y+GQ R ++ ++ G ++K +E + D+FQGRE + II SCVR++ H GIGFL
Sbjct: 1631 YKGQLRELKQHFANKYG---NAIFKAVEFNTTDAFQGRECEVIIFSCVRASNH-GIGFLA 1686
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
D RR+NV LTRA+ + +LGN + L++ W GL+ +E + +G + + QS
Sbjct: 1687 DIRRMNVGLTRAKSSLWVLGNSQSLARGEFWRGLINDARERQLYTDGDVYKILQS----- 1741
Query: 837 KPKKIYNDRRLFFGAGPGIVPNDISTSNPNAD 868
P++ +VPNDI ++ + D
Sbjct: 1742 -PQR-------------SLVPNDIEMTDASMD 1759
>gi|356570496|ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 233/449 (51%), Gaps = 32/449 (7%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ AV K++ + + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 198 LDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 256
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQ------ 500
+ E++ +K+VRL +R + + S ++ L L + E+ L
Sbjct: 257 IVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKALNGKLLKT 316
Query: 501 ----QLKDEQGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
KD Q EL S +E+K + L ++ +SADVI T +GA +L + F
Sbjct: 317 KDRNTRKDIQRELRTLSKEERKRQQLAVT---DVLKSADVILTTLIGAFSKKLDSTSFDL 373
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
V+IDE+ QA E C IPL+ G++ VL GDH QL P I +A + GL ++LFERL +
Sbjct: 374 VIIDEAAQALEIACWIPLLKGSR-CVLAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEVY 432
Query: 615 LKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID-FPWPVPNRPMFFY 671
I L VQYRMH + ++ S Y ++ ++ ++ P
Sbjct: 433 GDEITSMLTVQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTTSTEPTLLL 492
Query: 672 VQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNY 728
+ EE S N EA ++SGV+PS IG+ITPY Q ++
Sbjct: 493 IDTAGCDMEEKKDEEDSTFNEGEAEVTVAHAKRLVQSGVIPSDIGIITPYAAQ--VVLLK 550
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
M +N ++ K++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TR+
Sbjct: 551 MLKN---KEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRS 607
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R ++ + + +S L+ +++EH
Sbjct: 608 RRQCCLVSDTETVSGDGFLKRLIEYFEEH 636
>gi|393219539|gb|EJD05026.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 791
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 236/483 (48%), Gaps = 71/483 (14%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQV----LV 439
G P L LNASQ+ A+ ++ ISLIQGPPGTGKT T V + +G +V LV
Sbjct: 250 GDPPLNHLNASQIRAMAMMIGERISLIQGPPGTGKTKTIVETVKLL--KGHFEVPHPILV 307
Query: 440 CAPSNVAVDQLAEKISATGLKVVRL----CAK----------------SREAVSSPV--E 477
C +NVA+D L E + GLK +R+ AK + A P+ E
Sbjct: 308 CTFTNVAIDNLLEGFANGGLKPLRVGNEGSAKPELQEYMFDEQFDGHPKKAAELDPLIKE 367
Query: 478 HLTLHYQVRHL--------DTSEKSELHKLQQLK---DEQGELSSSDEKKYKALKRATER 526
+ L ++R L D + + K + +K D + S + + + L+ +
Sbjct: 368 YEELDSRIRKLRKDIKALEDEKPTNWIEKRENMKLDMDRKSYRSYILKARARLLRESIFY 427
Query: 527 EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
+I ADVIC T + + L F V +DE++ +TEP LIPL+ G K + L+GDH
Sbjct: 428 DICTKADVICTTSIRSASYYLQTMDFPVVFLDEASMSTEPASLIPLMKGCKHLALIGDHK 487
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQN 645
QL PV++ + A + L SLFERL+ G P + L VQYRMHP +S+FPS FY+ L +
Sbjct: 488 QLPPVVVSRDAQQGELDVSLFERLISEGDVPSVMLDVQYRMHPGISKFPSMEFYDTMLLD 547
Query: 646 GVTINERQSSGIDFPWPVP-------------NRPMFFYVQMGQEEISASGTSYLNRTEA 692
G +G P +P +RP ++ E + S S +N TE
Sbjct: 548 GTV-----HAGEVIPSLMPLSSSHLVAHPETGHRPSVIFIDHEGPEATKS-RSRVNWTEG 601
Query: 693 ANVEKIVTTFLRSG--VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK--------- 741
+ IV LR ++ IGVI PY+ Q + + ++ +R
Sbjct: 602 YIICSIVEDLLRLNPDLLGEDIGVIAPYKSQMNLLTRLLKKDDEVRDHFKAHLGDRALEV 661
Query: 742 -EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKV 800
IEV +VD F+GREK II S VR+N+ IGFL D RRLNV LTRA+ + ++G+
Sbjct: 662 PNIEVKTVDGFEGREKQAIIFSTVRNNQFGHIGFLADRRRLNVGLTRAKRALFVVGSMST 721
Query: 801 LSK 803
L +
Sbjct: 722 LER 724
>gi|145353141|ref|XP_001420883.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581119|gb|ABO99176.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 388
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 177/298 (59%), Gaps = 11/298 (3%)
Query: 511 SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLI 570
++ + Y+A RA + A +C TC G+G L F V++DE++Q TEP L+
Sbjct: 38 ATKHEAYEAQLRAV-----RYAQAVCATCSGSGSDFLDRINFSAVMLDEASQVTEPMALV 92
Query: 571 PLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSL 630
PL G +Q+VLVGDH QL P ++ ++A AG+ SLF+RL+ G+KP L Q+RMHP++
Sbjct: 93 PLANGCQQLVLVGDHKQLPPTVVSREAELAGMTLSLFDRLIRAGVKPYLLDTQFRMHPAI 152
Query: 631 SEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRT 690
S FPS SFY+G +++G ER + F WP+P+ P+ F + SY N+
Sbjct: 153 SYFPSLSFYKGLVKSGTPAAERPAPK-GFAWPIPSVPIAFCPSPQDAMETNDNMSYSNKV 211
Query: 691 EAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNYMS----RNGALRQQLYKEIEV 745
EA V KI+T L++ + IG++TPY Q I + + R G R+ +EV
Sbjct: 212 EAERVMKILTDLLQAKELRECNIGIVTPYASQVRLIRSMLRARGVRTGVDRETGEAGVEV 271
Query: 746 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+SVD +QGREK+ +I+S VR+N IGF+ D RR NV LTRAR G++++G+ LS+
Sbjct: 272 SSVDGYQGREKELMIVSTVRANNLNTIGFVADARRCNVTLTRARRGVIVVGHASTLSR 329
>gi|443895133|dbj|GAC72479.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1520
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 238/499 (47%), Gaps = 93/499 (18%)
Query: 389 PELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ--GQVLVCAPSNVA 446
PELN SQ AV +L+ +SLIQGPPGTGKT T + + ++ V++ A +NVA
Sbjct: 943 PELNRSQTQAVAMMLRERVSLIQGPPGTGKTRTIVTAIKLLKQEFHVPHPVMLAAHTNVA 1002
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRH-----LDTSEKSELHKLQQ 501
VD LA+ GL+VVR+ +R L H+ +RH LD K + L++
Sbjct: 1003 VDNLADGCIKAGLRVVRIGPSARARAGIDQFTLDAHF-LRHPAKPRLDDI-KRRMDTLEK 1060
Query: 502 LK----------------DEQGE----------LSSSD-------------------EKK 516
LK DE E LS D ++
Sbjct: 1061 LKNDYEMVRGTVAAPAARDESEEGIGATGGDAALSWEDVMAEREEEREVAQSQGGTASEE 1120
Query: 517 YKALKRATER--------------EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQ 562
Y+++K+ R EI ADVIC + + AG P L V DE++
Sbjct: 1121 YESIKKRLNRLKATYFFLRASIRGEILNGADVICGSAIAAGSPELDMIDLPVVFFDEASM 1180
Query: 563 ATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL------LGLK 616
ATEP L+PL+ G + + ++GDH QL PV+ +A + GL++SLFERL+ +
Sbjct: 1181 ATEPVSLVPLMKGCRHLSIIGDHKQLPPVVTSAEAKQGGLSKSLFERLIESTAADGSKIP 1240
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP-VPNRP----MFFY 671
L VQ+RMHP L+EFP+ +FY G L+NG ++ + + WP V + + F
Sbjct: 1241 STMLNVQFRMHPRLAEFPNKTFYSGALENGSGTDKIPAVESGY-WPHVEGKDEAHRLCFI 1299
Query: 672 VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG--VVPSQIGVITPYEGQRAYIVNYM 729
G+E + + S N EA + LR + IG++TPY GQ+ + +
Sbjct: 1300 DHKGRESKADNSLSLCNVAEARLAVDVAMDVLRRNPELTGDDIGIVTPYAGQQILLERML 1359
Query: 730 SRN---------GAL--RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
+ GAL R I+V +VD F+GREK I+ S VR+N +GFL D
Sbjct: 1360 HNDTSAERRRAAGALGARSSQLGCIDVHTVDGFEGREKKVILFSTVRTNAQGYVGFLADG 1419
Query: 779 RRLNVALTRARYGIVILGN 797
RRLNVALTRA+ + +LGN
Sbjct: 1420 RRLNVALTRAQSALFVLGN 1438
>gi|432859192|ref|XP_004069058.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein-like [Oryzias latipes]
Length = 2885
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/523 (31%), Positives = 248/523 (47%), Gaps = 81/523 (15%)
Query: 370 VEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV--- 426
V+ M+R + R+ LPELN SQ AV + + P +LIQGPPGTGKTV IV
Sbjct: 2370 VQYSMLRFQVKRKKLPGDLPELNDSQSQAVTTAINEPFTLIQGPPGTGKTVVGVYIVHWF 2429
Query: 427 --------------YHMAKQGQGQVLVCAPSNVAVDQLAEKIS------ATGLKVVRLCA 466
Y + + +L C PSN +VD +A K+ L+++R+ +
Sbjct: 2430 LEMNSKTPRIFDDPYDEHRNKKEVILYCGPSNKSVDVVAGKLLYYLMRLKDSLRLLRVYS 2489
Query: 467 KSREAVSSP---------------------VEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
E + P + +TLH+++R ++ K +
Sbjct: 2490 HHVEMLDYPYPDSTLQFSPKTLRQDRSKPELRSITLHHRMRENPNPHADDIRKFDERIRR 2549
Query: 506 QGELSSSDEKKYK-ALKRATEREISQSADVICCTCVGAGDPRLA-NFRFRQVLIDESTQA 563
+ + + ++YK LK+A E+ Q D+I CTC + P L+ + RQ+LIDE A
Sbjct: 2550 NEDFTQKEIEEYKDLLKKARVHELEQH-DIILCTCTQSSTPSLSRSVSARQILIDECAMA 2608
Query: 564 TEPECLIPLVLGA-KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV--LLGLKPIRL 620
TEP+ LIPLV ++VVL+GDH QL P++ + + G+++SLFE L K + L
Sbjct: 2609 TEPQALIPLVCNKPEKVVLIGDHKQLRPIVKNESVKKLGMSRSLFESYFNQLSEKKAVML 2668
Query: 621 QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFF------YVQM 674
QYRMH + EFPS FYEG L+ V E +S + V P+ F +++
Sbjct: 2669 DTQYRMHEDICEFPSEKFYEGKLKTAV---EPAASVLRVDGKV--MPVVFGDIEGVTIKL 2723
Query: 675 GQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ-IGVITPYEGQRAYIVNYMSRNG 733
+ + S N E V +IVT + V + I V++PY Q + I + +N
Sbjct: 2724 VVKTSKGNNNSKANYEERDQVVRIVTMLVNKAKVEQRSIVVLSPYNAQVSEIREELGKNN 2783
Query: 734 ALRQQLYKEIEVASVDSFQGREKDYIILSCVRS-------NEHQG------IGFLNDPRR 780
K+I V ++ QG E Y+ILS V S E G IGF+ DP +
Sbjct: 2784 ------LKQITVTTITKSQGSEWRYVILSTVCSLSSKEIVREPDGGWLSKHIGFVGDPNQ 2837
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG 823
+NV +TRA+ G+ I+GN K+L+ W LL HY+ + E
Sbjct: 2838 INVGITRAKEGLCIIGNQKLLACSSTWRALLAHYRCRNAVTEA 2880
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 195/481 (40%), Gaps = 93/481 (19%)
Query: 383 FGAPGLP-------ELNASQVFAVKSVL-----QRPIS--LIQGPPGTGKTVTSAAIVYH 428
FG G+P +LN Q AV +L ++ ++ LI GP GTGKT T A
Sbjct: 855 FGNCGVPVGNVTFEKLNPKQQLAVDFILGDCNGKKFVAPLLIYGPFGTGKTFTLATATRE 914
Query: 429 MAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHL 488
+ K Q +VL+C +N + D L + +
Sbjct: 915 LCKHPQNKVLICTHTNSSAD------------------------------LYIRDHFHPI 944
Query: 489 DTSEKSELHKLQQLKDEQGE-LSSSDE--KKYKALKRATEREISQSAD-------VICCT 538
+SEK L L+ ++QG L ++DE KY L + + + D V+ T
Sbjct: 945 ISSEKEGLQPLRIKANKQGRALLTTDEITLKYCLLSKDKHQFLPPKKDDLDAHNIVVTTT 1004
Query: 539 CVGAG--DPRLANFRFRQVLIDESTQATEPECLIPLVLGAK--QVVLVGDHCQLGPVIMC 594
+ D +L F +LIDE++Q E E L+ L L ++VL GDH Q+GP +
Sbjct: 1005 SMAKHFHDLKLPEGYFTHILIDEASQMLECEALLALDLAGSNTRIVLAGDHMQMGPQLFS 1064
Query: 595 KKAARAGLAQSLFERLV---------LLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQN 645
R +L RL I YR + EF S FY G
Sbjct: 1065 VDDDRRS-DHTLLTRLFHYYQGQLCDAAQSSRIIFSDNYRSTKEIVEFVSTHFYVGK--- 1120
Query: 646 GVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS 705
N +++G D P N + F+ G + S+ N E V K+V L
Sbjct: 1121 ---TNVIKAAG-DVSPPANNHALRFHHVRGDCALDRFSMSWWNMQEVVEVAKVVKDILEQ 1176
Query: 706 GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK---EIEVASVDSFQGREKDYIILS 762
PS G + E + I++ ++ +RQ L K EI V ++ + QG++ +I++
Sbjct: 1177 W--PSTWGQM---EQRSICILSEGAQVWKIRQALSKTFPEINVETLANVQGKQFRAVIMT 1231
Query: 763 CVRSNEHQ------GIGFLNDPRRLNVALTRARYGIVILGNPKVLSK----QPLWNGLLT 812
V++ + G+ ND R LN A+TRA+ +V++G+ L +W +
Sbjct: 1232 TVQTRDSLQSSHLPGLPLFNDARVLNTAMTRAQSLVVVVGDAAALCSFGKCSGIWKSFID 1291
Query: 813 H 813
H
Sbjct: 1292 H 1292
>gi|392864810|gb|EAS30536.2| tRNA-splicing endonuclease [Coccidioides immitis RS]
Length = 2141
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 176/572 (30%), Positives = 268/572 (46%), Gaps = 119/572 (20%)
Query: 387 GLPELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM---------------- 429
G +LN +Q AVKS + +LIQGPPG+GKT T A+V +
Sbjct: 1292 GTYDLNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPG 1351
Query: 430 ---AKQGQGQVLVCAPSNVAVDQLAEKIS---------ATGLKVVRLCAKSREAVSSPVE 477
A+ ++LVCAPSN AVD+L + A + V+RL +A+++ V
Sbjct: 1352 DKTARTLAKKLLVCAPSNAAVDELVMRFKEGVKTLQGRAQKISVLRL--GRSDAINTNVL 1409
Query: 478 HLTLHYQV----------------------RHLDTSEK-------------------SEL 496
+TL +V H DTS K +EL
Sbjct: 1410 DVTLDERVNAKLSEIGQKNGSERDLQSLYTEHKDTSNKFNEIRERMDQCRAKAQALPAEL 1469
Query: 497 HK-LQQLKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTCVGAGDP 545
+ LK ++ +LS S+ +K A +R ++EI A VIC T G+G
Sbjct: 1470 EREFDLLKKKKAQLSQAIDSARDKNQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHE 1529
Query: 546 RLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K+A+R
Sbjct: 1530 MFQTLSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYE 1589
Query: 604 QSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
QSLF R+ + + L QYRMHP +S FPS +FY+G LQ+G + + + PW
Sbjct: 1590 QSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRIR----PWH 1645
Query: 663 VPNR--PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR---SGVVPSQIGVITP 717
P F+ G + G S +N E ++ ++ + +IG+ITP
Sbjct: 1646 NTELLGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITP 1705
Query: 718 YEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
Y+GQ R ++ ++ G ++K +E + D+FQGRE + II SCVR++ H GIGFL
Sbjct: 1706 YKGQLRELKQHFANKYG---NAIFKAVEFNTTDAFQGRECEVIIFSCVRASNH-GIGFLA 1761
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
D RR+NV LTRA+ + +LGN + L++ W GL+ +E + +G + + QS
Sbjct: 1762 DIRRMNVGLTRAKSSLWVLGNSQSLARGEFWRGLINDARERQLYTDGDVYKILQS----- 1816
Query: 837 KPKKIYNDRRLFFGAGPGIVPNDISTSNPNAD 868
P++ +VPNDI ++ + D
Sbjct: 1817 -PQR-------------SLVPNDIEMTDASMD 1834
>gi|393786855|ref|ZP_10374987.1| hypothetical protein HMPREF1068_01267 [Bacteroides nordii
CL02T12C05]
gi|392658090|gb|EIY51720.1| hypothetical protein HMPREF1068_01267 [Bacteroides nordii
CL02T12C05]
Length = 634
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 240/468 (51%), Gaps = 47/468 (10%)
Query: 376 RNTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
R P RF P LN++Q AV VL + ++++ GPPGTGKT T +Y + +
Sbjct: 182 RELYPVRF-----PWLNSTQEEAVNKVLCTKDVAIVHGPPGTGKTTTLVEAIYETLHR-E 235
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 494
QVLVCA SN AVD ++EK+ G+ V+R+ +R V+ + L+ Y+ R +
Sbjct: 236 NQVLVCAQSNTAVDWISEKLVDRGVPVLRIGNPTR--VNDKM--LSFTYERRFESHPAYT 291
Query: 495 ELHKLQQ-LKDEQGELSSSDEKKYKALK--------RATEREI------SQSADVICCTC 539
EL +++ +++ G + + + ++ RATE EI S V+ T
Sbjct: 292 ELWGIRKSIREMSGRIRKGSHIERENMRNHISHLRDRATELEILINEALFSSTRVVASTL 351
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
V + L RF + IDE+ QA E C I + +V+ GDHCQL P I C +AAR
Sbjct: 352 VSSNHRILNGRRFSTLFIDEAAQALEAACWIA-IRKTDRVIFAGDHCQLPPTIKCIEAAR 410
Query: 600 AGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
GL +L E++ + L +VQYRM+ S+ FPS FY L++ I RQ +D
Sbjct: 411 GGLNHTLMEKVATNKPSSVSLLKVQYRMNESIMRFPSEWFYNNQLESAPEI--RQRGILD 468
Query: 659 FPWPVPNRPMFFYVQMGQ----EEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPS 710
F P+ ++ + EE +N+ EA +E + + V+
Sbjct: 469 FDTPM------IWIDTSEMECHEEFVGESFGRINKPEANLLLQELESYIQKIGENRVLDE 522
Query: 711 QI--GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE 768
QI G+I+PY+ Q Y+ N + + R+ I V +VD FQG+E+D I +S VR+NE
Sbjct: 523 QIDFGLISPYKAQVQYLRNKIKSSSFFRR-FRPLITVNTVDGFQGQERDVIFISLVRANE 581
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
IGFLND RR+NVA+TRAR +VILGN L K ++ L+ + ++
Sbjct: 582 SGQIGFLNDLRRMNVAITRARMKLVILGNAATLIKHTFYHKLMEYIQK 629
>gi|303236249|ref|ZP_07322845.1| putative DNA helicase [Prevotella disiens FB035-09AN]
gi|302483563|gb|EFL46562.1| putative DNA helicase [Prevotella disiens FB035-09AN]
Length = 641
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 249/468 (53%), Gaps = 52/468 (11%)
Query: 383 FGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F LP LN +Q AV VL + ++++ GPPGTGKT T + + + QVLVCA
Sbjct: 188 FAPIRLPWLNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMK-ESQVLVCA 246
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD + EK+ G+ V+R+ +R V+ + L Y+ R H D + + K
Sbjct: 247 QSNMAVDWICEKLVDRGINVLRIGNPTR--VNDKM--LGFTYERRFEAHPDYDQLWAIRK 302
Query: 499 -LQQLKDEQGELSSSDEKKYKALK-RATEREI---SQ---SADVICCTCVGAGDPRLANF 550
++QL++ +G + S +K LK RATE EI SQ A VI T VG+ +
Sbjct: 303 AIRQLRNGKGRGTDSYHQKMDRLKSRATELEIRINSQLFGEARVIASTLVGSNSRIMEGQ 362
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
+F + IDE+ QA E C IP + A +V+ GDHCQL P + A +AGL ++L ER+
Sbjct: 363 KFSTLFIDEAAQALEAACWIP-IRRASRVIFAGDHCQLPPTVKSIAALKAGLGKTLMERI 421
Query: 611 VLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--WPVPN 665
V KP L+VQYRM+ + F S+ FY G +++ I R D P W +
Sbjct: 422 V--ENKPEVVTLLKVQYRMNEQIMRFSSDWFYHGEVESAPQIKYRGILDYDHPMLWLDTS 479
Query: 666 RPMFFYVQMGQEEISAS----GTSY--LNRTEAANVEKIVTTFL----RSGVVPSQI--G 713
+++G +E + G SY +N+ EA K + + + ++ +I G
Sbjct: 480 E-----IEVGNDEPTFHEQFVGESYGRINKGEAELTLKTLQDYFTKIGKQRILDERIDVG 534
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYK----EIEVASVDSFQGREKDYIILSCVRSNEH 769
VI+PY Q Y+ R +++ +K I V +VD FQG+E+D I++S VR+NE+
Sbjct: 535 VISPYRAQVQYL-----RRLIKKREFFKPYRALISVNTVDGFQGQERDVILISMVRANEN 589
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
IGFL D RR+NVA+TRAR ++ILGN +S+ P + L Y +H
Sbjct: 590 GEIGFLKDLRRMNVAITRARMKLIILGNAATMSQHPFYKRLF-EYIQH 636
>gi|338532930|ref|YP_004666264.1| putative DNA helicase [Myxococcus fulvus HW-1]
gi|337259026|gb|AEI65186.1| putative DNA helicase [Myxococcus fulvus HW-1]
Length = 639
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 166/522 (31%), Positives = 253/522 (48%), Gaps = 55/522 (10%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
+D V ++DR++ ++ + + LLG+E P R+ P
Sbjct: 125 LRLDVVPNDVTYDRLRAGLQRIKALDKGAERHRREVLLGNE----------PPRYDKPRE 174
Query: 389 PE----LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 443
E LN Q A +++ L+ GPPGTGK+ A I G+ ++L A S
Sbjct: 175 LEPTRPLNPEQQDATARALAAEDFFLVHGPPGTGKSTVLAEIAAQAVADGK-RLLCTAAS 233
Query: 444 NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSEL------ 496
N AVD L + GL+ +R+ +R V++ ++ TL V H D +L
Sbjct: 234 NAAVDHLLDLCLDKGLRAIRVGHPAR--VAARLQEHTLDIVVESHPDRGVSRDLFDEAYS 291
Query: 497 -------HKLQQLKDEQ---GELSSSDEK----KYKALKRATEREISQSADVICCTCVGA 542
+ Q E+ S+S+ K + +AL+R R + +ADVIC T
Sbjct: 292 LLGYARRQRTQGRSRERFANARASTSEAKGMLDEARALERKAVRSVLANADVICVTLSSL 351
Query: 543 GDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
LA +F L+DE+TQATEP L+ L A +V+L GD QL P ++ ++AA+AGL
Sbjct: 352 DSGVLAGEQFDLALLDEATQATEPLALLGF-LRAPRVILAGDPQQLPPTVLSQEAAKAGL 410
Query: 603 AQSLFERLVL---LGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
SLFERL+ G+K + L+ QYRM+ + +FPS Y G L+ ++ +R +
Sbjct: 411 GVSLFERLLKDHGEGVKRM-LREQYRMNARIMDFPSREMYGGELRAHPSVADRTLDAVLT 469
Query: 660 PWPVPNRPMFFYVQMG----QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
P + P Y+ +EE+ + S N EA VE V L +G+ P ++ VI
Sbjct: 470 PGADVDAPPVLYLDTAGKGFEEEVEPTTKSLFNPGEAGLVEARVRALLAAGLSPRELAVI 529
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPY Q + + + L E+EV +VD+FQGREKD +I+S RSN +GFL
Sbjct: 530 TPYSAQAHQLRERI-------EALSPEVEVDTVDAFQGREKDAVIVSLTRSNSEGQLGFL 582
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
D RR+NVALTRAR + ++G+ LS P + + + H
Sbjct: 583 TDLRRMNVALTRARRHLFVVGDSATLSGHPFYTRFVEGTQAH 624
>gi|405963675|gb|EKC29231.1| hypothetical protein CGI_10027445 [Crassostrea gigas]
Length = 522
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/510 (32%), Positives = 250/510 (49%), Gaps = 74/510 (14%)
Query: 392 NASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVY--------HMAKQGQGQVLV-CAP 442
N Q A+K L+ SLIQGPPGTGKT T ++ H + G +++V C P
Sbjct: 28 NEKQSEAIKQALKSRFSLIQGPPGTGKTRTGMKLIILFNRINLKHREEGGDHKLVVYCGP 87
Query: 443 SNVAVDQLAE--KISATGL--KVVRLCAKSREAVSSPVEH-------------------- 478
SN +VD +A+ KI L K+VR+ S E + P+ +
Sbjct: 88 SNKSVDLVAKWMKIHIPDLCPKIVRMYGNSMENMMYPIPNREYINQRSCKDNRPDSDLAD 147
Query: 479 LTLHYQVRHLDTSEKSELHKLQ-QLKDEQGELSSSDEKKYK-ALKRATEREISQSADVIC 536
++LH +R+ + +L + Q K+ ++++ D KYK A+ AT+ E+ + DVI
Sbjct: 148 ISLHNLIRNKENPYAEKLAMFEKQFKNSPDDIATQDILKYKKAISMATQEELKK-YDVIF 206
Query: 537 CTCVGAGDP---RLANFRFRQVLIDESTQATEPECLIPLV-LGAKQVVLVGDHCQLGPVI 592
CT A P R + + Q++IDE+ TEPE L P++ A QVVL+GDH QL P+I
Sbjct: 207 CTTAAALSPKFLRATDGKIFQLIIDEAGMCTEPETLAPIIATKADQVVLIGDHKQLQPII 266
Query: 593 MCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
+C++A+ GL++SLFER + L QYRM+P + EFPS FY+G L+ G
Sbjct: 267 LCQEASDLGLSKSLFERY---ADSAVFLDTQYRMNPKICEFPSTQFYKGRLKTGPVGKWT 323
Query: 653 QSSGIDFPWPVPNRPMFFYVQMGQEEISASGT------SYLNRTEAANVEKIVTTFLRSG 706
+ W P+ P+ F G+EE + T S NR E +V K+ +
Sbjct: 324 VKKPLQI-WKRPDVPLLFCHIEGEEECLSVSTEEGNQQSRSNRAEVDHVVKVYEYLMSHD 382
Query: 707 VVP-SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 765
+ + V++ Y Q I + + + G + +V + S QG E DY+I S VR
Sbjct: 383 KMDWDDVKVMSQYNAQCFAIRDALKKKGLINS------DVTTAVSSQGGEWDYVIFSAVR 436
Query: 766 S--------NEHQG-----IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLT 812
S N ++G +GF+ D ++NV LTRAR GI+I+GN +L W L+
Sbjct: 437 SLPKFRIESNRNKGWCKKNLGFITDAHQINVVLTRARKGIIIIGNKNLLQCDETWEALIK 496
Query: 813 HYKEHECLVEGPLNNLKQSMVQFQKPKKIY 842
HY C+V N Q + ++P + Y
Sbjct: 497 HYTILGCMV----NAEDQDLTPLERPGRRY 522
>gi|255714232|ref|XP_002553398.1| KLTH0D15862p [Lachancea thermotolerans]
gi|238934778|emb|CAR22960.1| KLTH0D15862p [Lachancea thermotolerans CBS 6340]
Length = 2090
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 184/611 (30%), Positives = 281/611 (45%), Gaps = 134/611 (21%)
Query: 323 VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLG----------HEVEV 372
+D +H FS ++ F M T + TS+ G ++ L+G H V
Sbjct: 1242 IDRSHRFSRFLTLRAEIFAVKVMQMTTVEREYTSLVGLPFYDLVGQIVSGKPTPHHPVNS 1301
Query: 373 QMVRNTLPRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIV-YHMA 430
+ + + +LN SQ A+ S + SLIQGPPGTGKT T IV Y ++
Sbjct: 1302 GQIEDVKAKY-------KLNNSQAEAIVSTVSCEGFSLIQGPPGTGKTKTILGIVGYTLS 1354
Query: 431 KQG-----------------------QGQVLVCAPSNVAVDQLAEKISATGL-------- 459
Q + +VL+CAPSN AVD+L ++
Sbjct: 1355 TQKALPPGVIKQPLDAVASSTEQLLLKQKVLICAPSNAAVDELVLRLKLGVFDKSGRLFQ 1414
Query: 460 -KVVRLCAKSREAVSSPVEHLTLHYQV-------------------------------RH 487
K+VR+ +AV++ + LTL QV RH
Sbjct: 1415 PKLVRIGRP--DAVNAAIRDLTLEEQVEKRLNGKNYEFASNPDLEKNLQAAIGERRQLRH 1472
Query: 488 -LDTSEKS----------------------ELHKLQQLKDEQGELSSSDEKKYKALKRAT 524
LD + S ++++L + KDE E +S + + + +R
Sbjct: 1473 KLDNEDGSAGSTLSTDDITKIQLSIRELSRKINELGKQKDEIREKNSVNFRNREVDRRKA 1532
Query: 525 EREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLV 582
+ I +DVIC T G+ +A+ +F V++DE+ Q TE +IPL GAK+ ++V
Sbjct: 1533 QSRILAESDVICSTLSGSAHDIMASLGVKFDTVIVDEACQCTELSSIIPLRYGAKRCIMV 1592
Query: 583 GDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGT 642
GD QL P ++ A+ QSLF R+ P L VQYRMHP++S+FPS FY+G
Sbjct: 1593 GDPNQLPPTVLSGAASNFKYNQSLFVRMEK-QCSPHLLNVQYRMHPAISKFPSIEFYKGK 1651
Query: 643 LQNG---VTINERQSSGIDFPWPVPNRP-----MFFYVQMGQEEISASGTSYLNRTEAAN 694
L +G TIN R PW +RP FF + G++E + S++N E
Sbjct: 1652 LTDGPDMETINTR-------PWH--SRPPLGPYKFFDIATGKQEQNKKTMSFVNFEECKV 1702
Query: 695 ----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 750
VE ++ ++ +S +IG+I+PY Q + R + ++ ++D
Sbjct: 1703 AIELVEYLLNSYEKSFDFSGKIGIISPYREQMQTMRREFRR--YFGNTIAGYVDFNTIDG 1760
Query: 751 FQGREKDYIILSCVRSNEHQ-GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNG 809
FQG+EK+ II+SCVR+++ + G+GFL D RR+NVALTRA+ + ILG+ L K LW
Sbjct: 1761 FQGQEKEIIIISCVRADDTKSGVGFLKDFRRMNVALTRAKTSMWILGHHSSLFKNKLWRN 1820
Query: 810 LLTHYKEHECL 820
L+T K+ CL
Sbjct: 1821 LITDAKDRNCL 1831
>gi|326800123|ref|YP_004317942.1| ATPase AAA [Sphingobacterium sp. 21]
gi|326550887|gb|ADZ79272.1| AAA ATPase [Sphingobacterium sp. 21]
Length = 630
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 248/467 (53%), Gaps = 54/467 (11%)
Query: 387 GLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 445
L LNA+Q A++ + I++I GPPGTGKT T + K+ Q+LV APSN
Sbjct: 171 SLDRLNANQQLAIEKIRSANDIAIIHGPPGTGKTTTIIEACKVLLKERNCQLLVVAPSNT 230
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
AVD L +++ + V R+ + SR V+ + H TL Q+ TS E+ K+++ ++
Sbjct: 231 AVDLLTDQLLKAQINVTRIGSPSR--VTPELLHATLDEQISQ--TSSIKEVKKIRKRANQ 286
Query: 506 QGELSSSDEKKY----------------------KALKRATEREISQSADVICCTCVGAG 543
E++ ++ + AL++ + ++A VI T VGAG
Sbjct: 287 FREMARRYKRNFGKEERIQRQTLFAEAAKLIKEADALEQYATESVIKNAQVITATLVGAG 346
Query: 544 DPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
+ N F V+IDE+ QA EP C IP +L AK+++L GDH QL P I AA GL
Sbjct: 347 HYSIKNICFEAVIIDEAAQALEPACWIP-ILKAKKLILAGDHQQLPPTIKSVSAANQGLK 405
Query: 604 QSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTL--QNGVTINERQSSGIDFP 660
++L E+ + L + LQ QYRMH S+ F S FY+ +L N V ++ + FP
Sbjct: 406 ETLLEKCIHLYPQSGVMLQEQYRMHTSIMSFSSQKFYQSSLIAHNSV------ANTLLFP 459
Query: 661 WPVPNRPMFFY--VQMGQEEISASGTSYLNRTEAANVE---KIVTTFLRSGVVPS---QI 712
++P+ F V G +E G+ Y N EA+ V +++T L P +I
Sbjct: 460 ---NDQPLQFIDTVGCGFDERDDEGSIY-NLEEASFVLHYLSMLSTSLSQHYSPENYPRI 515
Query: 713 GVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQG 771
+I+PY Q + + + A +YK+ + + ++D FQG+E+D +I+S RSN+ +
Sbjct: 516 AIISPYASQ---VDKFKALLEADPLSIYKDKVTINTIDGFQGQERDIVIISLTRSNQERK 572
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHY-KEH 817
IGFL+D RR+NVA+TRA+ +V++G+ LSK P + L+T+ KEH
Sbjct: 573 IGFLSDIRRMNVAMTRAKKKLVMVGDSLTLSKLPFYADLITYSEKEH 619
>gi|406858745|gb|EKD11835.1| DNA-binding protein SMUBP-2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 690
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 240/480 (50%), Gaps = 59/480 (12%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R ++LI GPPGTGKT T ++ M KQ +VLVC PSN++V
Sbjct: 211 PSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQMLKQNL-RVLVCGPSNISV 269
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + +VRL +R + ++ E + VR ++++ +
Sbjct: 270 DNIVERLAPHKIPIVRLGHPARLLPSVLNHSLDVLTQTSEAAAIVKDVRKEMDTKQASIK 329
Query: 498 KLQQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
K + ++ + E K+++ +R + + + V+ T GAG + + F V
Sbjct: 330 KTKSGRERKAIYGDLKELRKEFRERERKCIGSLIKGSKVVLATLHGAGGFQTKDEVFDVV 389
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC----KKAARA----------G 601
+IDE++QA E +C +PL L A +VVL GDH QL P I K ++A
Sbjct: 390 IIDEASQALEAQCWVPL-LRASKVVLAGDHLQLPPTIKTLNSKTKKSKAVETEGIIKGMT 448
Query: 602 LAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
L +LF+RL+ L I+ L QYRMH + FPS+ YE L + R +
Sbjct: 449 LETTLFDRLLALHGPAIKRMLTTQYRMHEKIMRFPSDELYESKLIAADGVKTRILK--EL 506
Query: 660 PWPVP-----NRPMFFYVQMG--------QEEISAS------GTSYLNRTEAANVEKIVT 700
P+ V +P+ FY G +EE+ G S N EAA V + V
Sbjct: 507 PYEVAETEDTTKPLIFYDTQGGDFPEKNEEEEVDKKAGKGMMGDSKSNEMEAALVRQHVQ 566
Query: 701 TFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYII 760
+ + +GV P I VITPY Q A I + + ++ + IE+ SVD FQGREK+ +I
Sbjct: 567 SLVDAGVEPEDIAVITPYNAQLALIKSSI-------KEAFPGIELGSVDGFQGREKEAVI 619
Query: 761 LSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 820
+S VRSN + +GFL + RRLNVA+TR + +V++G+ + L + +EH L
Sbjct: 620 VSLVRSNSDKEVGFLGEKRRLNVAMTRPKRSLVVIGDSETLQGNKFLKRWMEFLEEHSDL 679
>gi|303318509|ref|XP_003069254.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240108940|gb|EER27109.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 2141
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 175/572 (30%), Positives = 269/572 (47%), Gaps = 119/572 (20%)
Query: 387 GLPELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM---------------- 429
G +LN +Q AVKS + +LIQGPPG+GKT T A+V +
Sbjct: 1292 GTYDLNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPG 1351
Query: 430 ---AKQGQGQVLVCAPSNVAVDQLAEKIS---------ATGLKVVRLCAKSREAVSSPVE 477
A+ ++LVCAPSN AVD+L + A + V+RL +A+++ V
Sbjct: 1352 DKTARTLAKKLLVCAPSNAAVDELVMRFKEGVKTLQGRAQKISVLRL--GRSDAINTNVL 1409
Query: 478 HLTLHYQV----------------------RHLDTSEK-------------------SEL 496
+TL +V H D+S K +EL
Sbjct: 1410 DVTLDERVNAKLSEIGQKNGSERDLHSLYTEHKDSSNKFNEIRERMDQCRAKAQGLPAEL 1469
Query: 497 HK-LQQLKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTCVGAGDP 545
+ LK ++ +LS S+ +K A +R ++EI A VIC T G+G
Sbjct: 1470 EREFDLLKKKKAQLSQAIDSARDKSQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHE 1529
Query: 546 RLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K+A+R
Sbjct: 1530 MFQTLSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYE 1589
Query: 604 QSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
QSLF R+ + + L QYRMHP +S FPS +FY+G LQ+G ++ + + PW
Sbjct: 1590 QSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPSMAKLRIR----PWH 1645
Query: 663 VPNR--PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR---SGVVPSQIGVITP 717
P F+ G + G S +N E ++ ++ + +IG+ITP
Sbjct: 1646 STELLGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITP 1705
Query: 718 YEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
Y+GQ R ++ ++ G ++K +E + D+FQGRE + II SCVR++ H GIGFL
Sbjct: 1706 YKGQLRELKQHFANKYG---NAIFKAVEFNTTDAFQGRECEVIIFSCVRASNH-GIGFLA 1761
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
D RR+NV LTRA+ + +LGN + L++ W GL+ +E + +G + + QS
Sbjct: 1762 DIRRMNVGLTRAKSSLWVLGNSQSLARGEFWRGLINDARERQLYTDGDVYKILQS----- 1816
Query: 837 KPKKIYNDRRLFFGAGPGIVPNDISTSNPNAD 868
P++ +VPNDI ++ + D
Sbjct: 1817 -PQR-------------SLVPNDIEMTDGSMD 1834
>gi|405355805|ref|ZP_11024917.1| hypothetical protein A176_1051 [Chondromyces apiculatus DSM 436]
gi|397091077|gb|EJJ21904.1| hypothetical protein A176_1051 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 639
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 253/517 (48%), Gaps = 45/517 (8%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
+D V ++DR++ ++ + + LLG+E R PR F P
Sbjct: 125 LRLDVVPNDVTYDRLRAGLQRIKALDKGAERHKREVLLGNEPP----RFDKPREF-EPTR 179
Query: 389 PELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
P Q +++ L+ GPPGTGK+ A I GQ ++L A SN AVD
Sbjct: 180 PLNPEQQDATARALASEDFFLVHGPPGTGKSTVLAEIAAQAVADGQ-RLLCTAASNAAVD 238
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSELHK-------LQ 500
L + GL+ VR+ +R V++ ++ TL V H D EL
Sbjct: 239 HLLDLCLDKGLRAVRVGHPAR--VAARLQEHTLDIVVESHPDRVVSRELFDEAYSLLGYA 296
Query: 501 QLKDEQGE---------LSSSDEK----KYKALKRATEREISQSADVICCTCVGAGDPRL 547
+ + QG S+S+ K + +AL+R + + +ADVIC T L
Sbjct: 297 RRQRNQGRSRERFANARASTSEAKGMLDEARALERKAVKAVLANADVICVTLSSLDSGVL 356
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
+ +F L+DE+TQATEP L+ L A +V+L GD QL P ++ ++AA+AGL SLF
Sbjct: 357 SGEKFDLALLDEATQATEPLALLGF-LRAPRVILAGDPQQLPPTVLSQEAAKAGLGVSLF 415
Query: 608 ERLVL---LGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP-V 663
ERL+ G+K + L+ QYRM+ + FPS Y G L+ ++ +R + + P V
Sbjct: 416 ERLLKDHGEGVKRM-LREQYRMNARIMAFPSREMYAGELRAHPSVADRALAEVLTPGADV 474
Query: 664 PNRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEG 720
P+ F G +EE+ + S N EA VE V L +G+ P ++ VITPY
Sbjct: 475 DAPPVLFLDTAGKGFEEEVEPTTRSLFNPGEAGLVEARVRALLAAGLSPRELAVITPYSA 534
Query: 721 QRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
Q + + + L ++EV +VD+FQGREKD II+S RSN +GFLND RR
Sbjct: 535 QAHRLRERI-------EALSPDVEVDTVDAFQGREKDAIIVSLTRSNGEGQLGFLNDLRR 587
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+NVALTRAR + ++G+ LS + + +EH
Sbjct: 588 MNVALTRARRHLFVVGDSATLSGHAFYARFVEGTQEH 624
>gi|168051009|ref|XP_001777949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670709|gb|EDQ57273.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 791
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 239/458 (52%), Gaps = 44/458 (9%)
Query: 391 LNASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
L+ SQ A++ L +RP+ +IQGPPGTGKT ++ +G+ +VL AP+N AVD
Sbjct: 316 LDESQKRAIEMGLDRKRPVVVIQGPPGTGKTSVVTELIEKAVMRGE-RVLATAPTNAAVD 374
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKSELHKLQQLKDEQG 507
+ E+++ GL VVR+ +R V+ V +L + V + L T + + L+ +
Sbjct: 375 NIVERLANAGLNVVRVGNPAR--VAPAVCSRSLSFIVDKSLTTFRGDLVRRRANLRSDLR 432
Query: 508 ELSSSD----------EKKYKALKRATEREISQ---SADVICCTCVGAGDPRLANFR-FR 553
E +D ++ K+LK+ + I+ SA VI CT GAGDP + F
Sbjct: 433 ECLDNDSVAAGIRQVLKQLGKSLKQKEKEAINDALSSAQVILCTNTGAGDPLIRKQEAFD 492
Query: 554 QVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
V++DE+ QA EP C IPL+ G ++ VL GD QL P IM + A GL SL ER L
Sbjct: 493 LVVVDEAAQAIEPSCWIPLLQG-RRCVLAGDASQLAPTIMSRTALDGGLGVSLMERAGNL 551
Query: 614 --GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE---RQSSGIDFPWPVPNRPM 668
GL L QYRMH +++++ S+ Y G+L++ + R + G+ PV PM
Sbjct: 552 HSGLLSTMLSTQYRMHSAIADWASHEMYGGSLRSAPAVASHLLRDTPGVK-DTPVTKVPM 610
Query: 669 FFY---------VQMGQEEISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
+ +E + +GT S+ N EA V + L +GV PS I V +PY
Sbjct: 611 LLLDTRLPFGSLIPGCEERLDPAGTGSFYNEGEADIVVDHIRALLATGVEPSSIAVQSPY 670
Query: 719 EGQRAYIVNYMSRN-GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Q + + + GA + ++VASVDSFQGRE D +++S VRSN +GFL D
Sbjct: 671 MAQVQLLCDRIEEIPGA------EGVQVASVDSFQGREADAVVVSMVRSNNIGVVGFLGD 724
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
RR+NVA+TRAR + I+ + +S+ LL H +
Sbjct: 725 NRRMNVAVTRARKHVTIVCDSTTVSRNSFLQRLLQHIR 762
>gi|442323516|ref|YP_007363537.1| DNA helicase [Myxococcus stipitatus DSM 14675]
gi|441491158|gb|AGC47853.1| DNA helicase [Myxococcus stipitatus DSM 14675]
Length = 637
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 256/518 (49%), Gaps = 47/518 (9%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
+D V +++RM+ ++ + + LLG+E R PR F PG
Sbjct: 125 LRLDVVPNDVTYERMRTGLQRVKAMDKGLERRKREVLLGNEPP----RTDKPRDF-EPGR 179
Query: 389 PELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN Q+ AV +++ L+ GPPGTGK+ A + +GQ ++L A SN AV
Sbjct: 180 P-LNPEQLDAVGRALAAEDFFLVHGPPGTGKSTVLAEVAAQAVARGQ-RLLCTAASNAAV 237
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSELHK-------L 499
D L + GL+ VR+ +R V++ ++ TL V H D EL
Sbjct: 238 DHLLDLCLGQGLRAVRVGHPAR--VAARLQEHTLDIVVEEHPDRVVSRELFDEAFSLLGY 295
Query: 500 QQLKDEQGE--------LSSSDEKKY-----KALKRATEREISQSADVICCTCVGAGDPR 546
+ + QG +S+ E K +AL+R R + +ADV+C T
Sbjct: 296 ARRQRTQGRSRARFSNARASTTEAKAMLDEARALERKAVRSVLATADVVCVTLASLDSGV 355
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
L+ +F L+DE+TQATEP L+ L A V+L GD QL P ++ + AARAGLA SL
Sbjct: 356 LSGEQFDLALLDEATQATEPLALLGF-LRAPIVILAGDPQQLPPTVLSQDAARAGLAVSL 414
Query: 607 FERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP-WP 662
FERL+ G+K + L+ QYRM+ + +FPS Y G L+ ++ +R + + P
Sbjct: 415 FERLLADHGDGVKRMLLE-QYRMNTRIMDFPSREMYGGQLRAHPSVADRTLADVLPPGTE 473
Query: 663 VPNRPMFFYVQMGQ---EEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
V P+ F G+ EE+ + S N EA +E V L G+ ++ VITPY
Sbjct: 474 VDAPPVLFLDTAGKGFDEEVEPTTRSLFNTGEADLIEARVRALLALGLSQRELAVITPYS 533
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
Q + + + ++EV ++D+FQGREKD +++S RSN +GFLND R
Sbjct: 534 AQAHRLRERL-------ESFAPDVEVDTMDAFQGREKDAVLVSLTRSNSEGQVGFLNDLR 586
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R+NVALTRAR + ++G+ LS P + + + H
Sbjct: 587 RMNVALTRARRHLFVVGDSATLSGHPFYARFIEESQAH 624
>gi|118100744|ref|XP_417438.2| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein [Gallus gallus]
Length = 2818
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 266/576 (46%), Gaps = 88/576 (15%)
Query: 319 QGVPVDINHG---FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMV 375
+ VP +I+ F+V+ + K R + A+ + S LGHE ++
Sbjct: 2247 ENVPAEISQASARFTVELIPKMLPDVRKENAIWKLQ----NASDLAKSIALGHEPPSKVT 2302
Query: 376 RNTL--PRRFGAPGLP-ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAK- 431
++ + + F PG +LN SQ AV + L +P +LIQGPPGTGKTV IVY K
Sbjct: 2303 KSKILQQKSFDLPGSQRKLNPSQNKAVLNALTKPFTLIQGPPGTGKTVVGTHIVYWFHKL 2362
Query: 432 ------------------QGQGQVLVCAPSNVAVDQLAEKI-SATGLKVVRLCAKSREAV 472
QG+ +L C PSN +VD +AE + LK +R+ ++ E +
Sbjct: 2363 NEEATAKEQLPCPDEDEPQGKKCILYCGPSNKSVDVVAEILMKMKSLKPLRVYGEAIETL 2422
Query: 473 SSPVEHLTLHYQVRHL-DTSEKSEL------HKLQQLKDEQGELSSSDEKKYKALKRATE 525
P + H + L D EL H+++Q + + + +++ +A + TE
Sbjct: 2423 EYPYPGSSRHLSRKALRDAKPNHELSTIILHHRIRQPSNPKCQQICQFDRRVRAGEEITE 2482
Query: 526 REISQSA--------------DVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIP 571
EI Q DVI CTC A L +Q+LIDE +TEPE LIP
Sbjct: 2483 EEIKQHKHTLMEARAYELACHDVILCTCSSASAGSLEKLNVKQILIDECAMSTEPETLIP 2542
Query: 572 LV--LGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPS 629
LV A++VVL+GDH QL PV+ G+ SLFER + L QYRMH +
Sbjct: 2543 LVSHKHAEKVVLLGDHKQLKPVVNNDFCKSLGMETSLFERY---QKQAWMLDTQYRMHKN 2599
Query: 630 LSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR--PMFFYVQMGQEEISASGTSYL 687
+ EFPS FYE L+ + S + NR P+ F G+E+ T
Sbjct: 2600 ICEFPSQEFYEHRLKTCPQLLRIPS----VLYHKNNRCCPIIFGHVEGKEQSLVISTEEG 2655
Query: 688 NRTEAAN---VEKIVTT----FLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLY 740
N AN VE+ V T L + P I +++PY Q + I N L ++
Sbjct: 2656 NENSKANPEEVEQAVRTAKQLTLDGTIRPQSIAILSPYNAQVSEI------NKRLLKEGI 2709
Query: 741 KEIEVASVDSFQGREKDYIILSCVRSN-------------EHQGIGFLNDPRRLNVALTR 787
+ + V ++ QG E Y+ILS VRS + + +GF+ DP ++NVA+TR
Sbjct: 2710 RGVTVCTIMKSQGSEWRYVILSTVRSCSRHEIDKKPTKSWQKKHLGFVTDPNQVNVAITR 2769
Query: 788 ARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG 823
A+ G+ I+GN +L PLW LL HY +H C G
Sbjct: 2770 AQEGLCIIGNRYLLECNPLWRRLLQHYIDHNCYTSG 2805
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 193/470 (41%), Gaps = 88/470 (18%)
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD----QLAEKISATG- 458
Q P LI GP GTGKT T A + +Q +VL+C +N A D + K G
Sbjct: 773 QVPPLLIYGPFGTGKTFTLAMATLEVIRQPNTRVLICTHTNSAADIYIREYFHKYVTNGH 832
Query: 459 -----LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSD 513
L+++ A P+ L D ++
Sbjct: 833 PWAVPLRII--------ATDRPI------------------------NLTDPTTQMYCCL 860
Query: 514 EKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLV 573
K ++ + T EI + +I T + + ++A F ++IDE+ Q E E LIPL
Sbjct: 861 TKDQRSFRHPTREEIDKHP-IIITTSMLSKHLKVAPGYFTHIMIDEAAQMLECEALIPLS 919
Query: 574 LGA--KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP---------IRLQV 622
++VL GDH Q+ P + C ++ +L RL K I
Sbjct: 920 YATFETRIVLAGDHMQITPKLFCVADGQSAY-HTLLNRLFQFYQKEKHEVAMKSRIIFNE 978
Query: 623 QYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISAS 682
YR + EF S FY G G I+ +SG P P MF +V G E S
Sbjct: 979 NYRSTAGIIEFVSKHFYIG---KGNAIH---ASGNIPPHPEIYPLMFCHVP-GVAERDMS 1031
Query: 683 GTSYLNRTEAAN-VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK 741
S+ N +E VEK+ + R P + G + +R +V++ + A+RQ+L K
Sbjct: 1032 MISWHNASEITQVVEKVEEIYQRW---PHEWGA---QDQKRICVVSHGVQVSAIRQELRK 1085
Query: 742 ----EIEVASVDSFQGREKDYIILSCVRSNEHQGIG------FLNDPRRLNVALTRARYG 791
E+ V + ++ GRE II+S V ++E + F N+ R LN +TRA+
Sbjct: 1086 KQLPEVVVENYENLPGREFRVIIISTVHTSESLRVSASHNHEFFNEARVLNTIMTRAQSQ 1145
Query: 792 IVILGNPKVLSKQ----PLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
++++G+ L +W + EC+ +G ++ +M Q ++
Sbjct: 1146 VIVVGDAVALCSHGQCSKVWKRFI-----QECIEKGSISPANLTMAQIKQ 1190
>gi|207342692|gb|EDZ70377.1| YLR430Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 955
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 187/641 (29%), Positives = 300/641 (46%), Gaps = 138/641 (21%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VD+ NH FS +S + M T + +++ G Y+ L+G
Sbjct: 209 LKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVG- 267
Query: 369 EVEVQMVRNTLPRRFGAPGLP------ELNASQVFA-VKSVLQRPISLIQGPPGTGKTVT 421
++ + + P A + +LN SQ A V SV + SLIQGPPGTGKT T
Sbjct: 268 --QILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKT 325
Query: 422 SAAIV-YHMAKQG-----------------------QGQVLVCAPSNVAVDQLAEKISAT 457
I+ Y ++ + + ++L+CAPSN AVD++ ++ +
Sbjct: 326 ILGIIGYFLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLK-S 384
Query: 458 GL----------KVVRLCAKSREAVSSPVEHLTL-----------HYQVRH--------- 487
G+ ++VR+ + V+ ++ LTL +Y++R
Sbjct: 385 GVYDKQGHQFKPQLVRVGRS--DVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFN 442
Query: 488 -----------------------LDTSEKSELH-KLQQL----------KDEQGELSSSD 513
+ T + S+L K+++L +DE E +S +
Sbjct: 443 NAVTKRRELRGKLDSESGNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVN 502
Query: 514 EKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIP 571
+ +R + I +D+IC T G+ LA +F V+IDE+ Q TE +IP
Sbjct: 503 YRNRDLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIP 562
Query: 572 LVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLS 631
L G K+ ++VGD QL P ++ A+ QSLF R+ P L VQYRMHPS+S
Sbjct: 563 LRYGGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSIS 621
Query: 632 EFPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPNRPM-FFYVQMGQEEISASGTS 685
+FPS+ FY+G L++G +N+R PW P P FF + G++E +A S
Sbjct: 622 KFPSSEFYQGRLKDGPGMDILNKR-------PWHQLEPLAPYKFFDIISGRQEQNAKTMS 674
Query: 686 YLNRTEAANVEKIVTTFLRSGV----VPSQIGVITPYEGQRAYIVNYMSRN-GALRQQLY 740
Y N E ++V R +IG+I+PY Q + +R G + +
Sbjct: 675 YTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGM---IN 731
Query: 741 KEIEVASVDSFQGREKDYIILSCVRSNEHQG-IGFLNDPRRLNVALTRARYGIVILGNPK 799
K I+ ++D FQG+EK+ I++SCVR+++ + +GFL D RR+NVALTRA+ I +LG+ +
Sbjct: 732 KSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQR 791
Query: 800 VLSKQPLWNGLLTHYKEHECLVEG------PLNNLKQSMVQ 834
L+K LW L+ K+ CL P NN QS+++
Sbjct: 792 SLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNNRAQSILR 832
>gi|283779091|ref|YP_003369846.1| AAA ATPase [Pirellula staleyi DSM 6068]
gi|283437544|gb|ADB15986.1| AAA ATPase [Pirellula staleyi DSM 6068]
Length = 639
Score = 216 bits (550), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 174/502 (34%), Positives = 243/502 (48%), Gaps = 47/502 (9%)
Query: 338 TSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEV-EVQMVRNTLPRRFGAPGLPELNASQV 396
S +R AM+T E+ + LLG + + V+N F A L+ SQ
Sbjct: 143 VSRNRQLQAMRTATTVESGRIKQLRDSLLGETAPKFREVKN-----FVADA--ALDPSQQ 195
Query: 397 FAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS 455
VK L + I GPPGTGKT T A++ + +G +VL APSN+AVD L EK+
Sbjct: 196 EGVKLALSAEDFACIHGPPGTGKTTTLVAVIRQLVARG-AKVLATAPSNLAVDHLLEKLH 254
Query: 456 ATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSEL-HKLQQLKDEQGELSSSD 513
G++V+RL +R V + HL L QV H D + +L +LKD + + +
Sbjct: 255 LAGVRVLRLGHPAR--VQESLHHLVLDEQVENHPDVAVARKLVRDALRLKDRAAKFTRAK 312
Query: 514 EK-KYKALKRATEREI---------------SQSADVICCTCVGAGDPRLANFRFRQVLI 557
YK RA RE+ SADV+ T G L + RF +I
Sbjct: 313 PPPGYKQELRAEARELFSDARRIEAGVVRYLLDSADVVLATLTGIDATVLEDRRFDVAVI 372
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP 617
DE+ QATEP C P +L A +V+L GD QL P I+ +AAR GLA+SL ERL+
Sbjct: 373 DEAAQATEPACW-PALLRADRVILAGDPFQLPPTIISPEAARGGLARSLMERLLETSTTT 431
Query: 618 I--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV--PNRPMFFYVQ 673
I RL VQYRMH S+ F S FYE L ++ S + P + + F
Sbjct: 432 ISHRLAVQYRMHQSIMAFSSAEFYEQGLTADPSVASHLLSDLSEVTPTDRTSTALEFIDT 491
Query: 674 MG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMS 730
G E +S S N EA V K+ +GV I +I+PY Q + +
Sbjct: 492 AGAGYDERAGSSQESRENPQEAELVVKLALALRDAGVAAEAIAIISPYAAQVRLLRRLL- 550
Query: 731 RNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARY 790
+G L I+V ++D FQGRE + +I+S VRSN IGFL D RR+NVA+TRAR
Sbjct: 551 -DGTL-------IDVDTIDGFQGRESEAVIISLVRSNATGEIGFLADVRRMNVAITRARR 602
Query: 791 GIVILGNPKVLSKQPLWNGLLT 812
++I+G+ + + +L+
Sbjct: 603 KLIIIGDSATIGGHDFYARMLS 624
>gi|328851436|gb|EGG00591.1| hypothetical protein MELLADRAFT_118002 [Melampsora larici-populina
98AG31]
Length = 1001
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 229/479 (47%), Gaps = 77/479 (16%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ--VLVCA 441
G P L LN Q A+ + P+SLIQGPPGTGKT T +V + Q + VCA
Sbjct: 497 GDPDLGHLNEPQTRAIAMAISSPLSLIQGPPGTGKTQTIIQMVALLKIHFQVSQPIAVCA 556
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAK----SREAVSSPVEHLTLHYQV------------ 485
P++V+VD L + GLK VR C + + E +E L L + +
Sbjct: 557 PTHVSVDNLVLGLVKAGLKPVR-CGEHLKVASEVAQYSLETLELQHSLTPTIDAKNRRLE 615
Query: 486 ---RHLDTSEKSELH-------KLQQLKDEQGELSSSDEKKYK-------ALKRATEREI 528
+ LD EK + K Q +Q + + +YK LKR + +I
Sbjct: 616 SLTKDLDAIEKRWRNVKPAVSSKRQPANTKQARVLEILKTEYKRLLYEVYILKRRRQLQI 675
Query: 529 SQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQL 588
S+DV+CCTC+GAG L F V+IDE+ EP L+PL G+ VLVGDH QL
Sbjct: 676 IASSDVVCCTCLGAGASGLEAVEFASVIIDEAAMCHEPTALVPLTKGSAHAVLVGDHKQL 735
Query: 589 GPVIMCKKAARAGLAQSLFERL-VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
+ + A G SLFER+ ++ I L QYRM+P +S FP+ FY+ L + +
Sbjct: 736 PAITLSPAAEAHGFGISLFERIQSQQSVQSILLHKQYRMNPIISAFPNAEFYDHALVDSI 795
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQ--MGQEEISASGT-------------SYLNRTEA 692
P +P++F+ +G E+ S + + + N+TEA
Sbjct: 796 K-------------PDSIKPVYFHFDRSLGPEQKSRAVSFVTHNHLETKIEKTLTNQTEA 842
Query: 693 ANVEKIVTTFLRSG--VVPSQIGVITPYEGQRAYIVNY--------MSRNGALRQQLYKE 742
V I+ LR+ + IG+I PY GQ + + + + RN Q E
Sbjct: 843 EIVLGILRDLLRTNPELSGRDIGIIAPYRGQVSLLQSLQRQPQKASLIRNS--EQSYRNE 900
Query: 743 IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
+E+ +VD FQGREK IILSCVR N + IGFL D RR NVA TRA+ +++G+ L
Sbjct: 901 VEINTVDGFQGREKPVIILSCVRGNFERQIGFLADLRRFNVAATRAKQKFIVVGHLDTL 959
>gi|365764213|gb|EHN05738.1| Sen1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 2101
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 298/640 (46%), Gaps = 136/640 (21%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VD+ NH FS +S + M T + +++ G Y+ L+G
Sbjct: 1120 LKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVG- 1178
Query: 369 EVEVQMVRNTLPRRFGAPGLP------ELNASQVFA-VKSVLQRPISLIQGPPGTGKTVT 421
++ + + P A + +LN SQ A V SV + SLIQGPPGTGKT T
Sbjct: 1179 --QILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKT 1236
Query: 422 SAAIV-YHMAKQG-----------------------QGQVLVCAPSNVAVDQLAEKISAT 457
I+ Y ++ + + ++L+CAPSN AVD++ ++ +
Sbjct: 1237 ILGIIGYFLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSG 1296
Query: 458 GL---------KVVRLCAKSREAVSSPVEHLTL-----------HYQVRH---------- 487
++VR+ + V+ ++ LTL +Y++R
Sbjct: 1297 VYDKQGHQFKPQLVRVGRS--DVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFNN 1354
Query: 488 ----------------------LDTSEKSELH-KLQQL----------KDEQGELSSSDE 514
+ T + S+L K+++L +DE E +S +
Sbjct: 1355 AVTKRRELRGKLDSESGNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNY 1414
Query: 515 KKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPL 572
+ +R + I +D+IC T G+ LA +F V+IDE+ Q TE +IPL
Sbjct: 1415 RNRDLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPL 1474
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
G K+ ++VGD QL P ++ A+ QSLF R+ P L VQYRMHPS+S+
Sbjct: 1475 RYGGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISK 1533
Query: 633 FPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPNRPM-FFYVQMGQEEISASGTSY 686
FPS+ FY+G L++G +N+R PW P P FF + G++E +A SY
Sbjct: 1534 FPSSEFYQGRLKDGPGMDILNKR-------PWHQLEPLAPYKFFDIISGRQEQNAKTMSY 1586
Query: 687 LNRTEAANVEKIVTTFLRSGV----VPSQIGVITPYEGQRAYIVNYMSRN-GALRQQLYK 741
N E ++V R +IG+I+PY Q + +R G + + K
Sbjct: 1587 TNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGM---INK 1643
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQG-IGFLNDPRRLNVALTRARYGIVILGNPKV 800
I+ ++D FQG+EK+ I++SCVR+++ + +GFL D RR+NVALTRA+ I +LG+ +
Sbjct: 1644 SIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRS 1703
Query: 801 LSKQPLWNGLLTHYKEHECLVEG------PLNNLKQSMVQ 834
L+K LW L+ K+ CL P NN QS+++
Sbjct: 1704 LAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNNRAQSILR 1743
>gi|224026767|ref|ZP_03645133.1| hypothetical protein BACCOPRO_03524 [Bacteroides coprophilus DSM
18228]
gi|224020003|gb|EEF78001.1| hypothetical protein BACCOPRO_03524 [Bacteroides coprophilus DSM
18228]
Length = 607
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 241/452 (53%), Gaps = 42/452 (9%)
Query: 388 LPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVA 446
P LN +Q AV VL + ++++ GPPGTGKT T VY + + QVLVCA SN+A
Sbjct: 166 FPWLNRTQEEAVNKVLHAKDVAIVHGPPGTGKTTTLVEAVYETLHR-ENQVLVCAQSNMA 224
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE- 505
VD ++EK+ G+ V+R+ SR V+ + L+ Y+ R + +L +++ E
Sbjct: 225 VDWISEKLVDRGVSVLRIGNPSR--VNDKM--LSFTYERRFESHPDYPQLWSIRKAVREL 280
Query: 506 -----QGELSSSDEKKYKALK-RATEREISQSAD------VICCTCVGAGDPRLANFRFR 553
+ S +K +LK RATE EI +A VI CT V + + L +F
Sbjct: 281 YARMRKASDRESIRQKINSLKDRATELEIRINASLFAEARVIACTLVSSANRLLEGQKFG 340
Query: 554 QVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
+ IDE+ QA E C IP + +V+L GDHCQL P + C +A RAGL ++L + +V
Sbjct: 341 TLFIDEAAQALEAACWIP-IRKVDRVILAGDHCQLPPTVKCPQALRAGLGETLMQTIVKN 399
Query: 614 GLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYV 672
+ + L ++QYRM+ + F S+ FY G +Q+ + R S +DF P+ ++
Sbjct: 400 KPETVALLKLQYRMNEEIMRFSSDWFYGGMVQSAPEVKYR--SILDFDTPIE------WI 451
Query: 673 QMGQ----EEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQI--GVITPYEGQR 722
EE +N+ EA + ++ +T R + +I G+I+PY+ Q
Sbjct: 452 DTEDMDCNEEFVGENYGRINKAEAELSVSQLKTYITKIGRERFLEERIDVGLISPYKAQV 511
Query: 723 AYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
Y+ + R+ + Y+ I V +VD FQG+E+D I++S VR+NE IGFL+D RR+
Sbjct: 512 QYLRQLLKRDPFFKP--YRSLITVNTVDGFQGQERDVILISLVRANEDGQIGFLSDLRRM 569
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
NVA+TRAR ++ILG+ L++ + L +
Sbjct: 570 NVAITRARMKLIILGDVSTLTRHAFYRKLYEY 601
>gi|328351981|emb|CCA38380.1| hypothetical protein PP7435_Chr2-0694 [Komagataella pastoris CBS
7435]
Length = 2154
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 230/506 (45%), Gaps = 106/506 (20%)
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMA------------------------KQGQGQVLVCAP 442
SLIQGPPGTGKT T IV + + G +VLVCAP
Sbjct: 1293 FSLIQGPPGTGKTKTILGIVGKVLTTRNNLHSTPISIPGAVTSGPRKPETGVRKVLVCAP 1352
Query: 443 SNVAVDQLAEKIS--ATGL-------KVVRLCAKSREAVSSPVEHLTL------------ 481
SN AVD+L ++ G+ KVVRL +A++S V+ LTL
Sbjct: 1353 SNAAVDELVIRLREGVPGISGQMFKPKVVRLGRS--DAINSAVKDLTLEELVDAELNETA 1410
Query: 482 ------------HYQVRHLDTSEKSELHKLQQLK-------------------------D 504
H +V S + L ++ LK D
Sbjct: 1411 RAPKADQSIREKHNKVLAERNSIREALKEVSNLKPEEVKDLQKRYSEITKAKNELGKKLD 1470
Query: 505 EQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQ 562
EQ E S + + +RA + I A +IC T G+ LA F V+IDE+ Q
Sbjct: 1471 EQREEVSVSYRNREIQRRAVQFRILSQAQIICSTLSGSAHDFLATMDTSFDTVVIDEACQ 1530
Query: 563 ATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRL-Q 621
E +IPL G K+ ++VGD QL P ++ + AA QSLF R++ + K + L
Sbjct: 1531 CIELSAIIPLRYGCKRCIMVGDPNQLPPTVLSQAAAEYKYEQSLFVRMMNVHPKSVYLLN 1590
Query: 622 VQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISA 681
VQYRMHP +S FPS FY G L +G + + W P F G+E +
Sbjct: 1591 VQYRMHPQISVFPSKEFYNGKLIDGEGTETKNTRS----WHKKIPPYCFIDVTGKESTNT 1646
Query: 682 SGTSYLNRTEAANVEKIVTTFL---RSGVVPSQIGVITPYEGQ----RAYIVNYMSRNGA 734
S S NR EA V ++ L R S+IGVI+PY+ Q R I+ RN
Sbjct: 1647 SNKSLFNRAEAQAVVSLIDALLGLDRDFNFASKIGVISPYKQQVVLLRDMILRKFGRNIG 1706
Query: 735 LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 794
I+V +VD FQG+EKD I+ SCVR++E +G+GFL D RRLNVALTRA+ ++I
Sbjct: 1707 --------IDVNTVDGFQGQEKDVILFSCVRADETKGVGFLADVRRLNVALTRAKSTLLI 1758
Query: 795 LGNPKVLSKQPLWNGLLTHYKEHECL 820
+G+ LS LW L+ K+
Sbjct: 1759 VGHASNLSGHSLWRHLVQDSKDRNVF 1784
>gi|172574|gb|AAB63976.1| SEN1 [Saccharomyces cerevisiae]
Length = 2112
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 298/640 (46%), Gaps = 136/640 (21%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VD+ NH FS +S + M T + +++ G Y+ L+G
Sbjct: 1131 LKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVG- 1189
Query: 369 EVEVQMVRNTLPRRFGAPGLP------ELNASQVFA-VKSVLQRPISLIQGPPGTGKTVT 421
++ + + P A + +LN SQ A V SV + SLIQGPPGTGKT T
Sbjct: 1190 --QILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKT 1247
Query: 422 SAAIV-YHMAKQG-----------------------QGQVLVCAPSNVAVDQLAEKISAT 457
I+ Y ++ + + ++L+CAPSN AVD++ ++ +
Sbjct: 1248 ILGIIGYFLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSG 1307
Query: 458 GL---------KVVRLCAKSREAVSSPVEHLTL-----------HYQVRH---------- 487
++VR+ + V+ ++ LTL +Y++R
Sbjct: 1308 VYDKQGHQFKPQLVRVGRS--DVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFNN 1365
Query: 488 ----------------------LDTSEKSELH-KLQQL----------KDEQGELSSSDE 514
+ T + S+L K+++L +DE E +S +
Sbjct: 1366 AVTKRRELRGKLDSESGNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNY 1425
Query: 515 KKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPL 572
+ +R + I +D+IC T G+ LA +F V+IDE+ Q TE +IPL
Sbjct: 1426 RNRDLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPL 1485
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
G K+ ++VGD QL P ++ A+ QSLF R+ P L VQYRMHPS+S+
Sbjct: 1486 RYGGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISK 1544
Query: 633 FPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPNRPM-FFYVQMGQEEISASGTSY 686
FPS+ FY+G L++G +N+R PW P P FF + G++E +A SY
Sbjct: 1545 FPSSEFYQGRLKDGPGMDILNKR-------PWHQLEPLAPYKFFDIISGRQEQNAKTMSY 1597
Query: 687 LNRTEAANVEKIVTTFLRSGV----VPSQIGVITPYEGQRAYIVNYMSRN-GALRQQLYK 741
N E ++V R +IG+I+PY Q + +R G + + K
Sbjct: 1598 TNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGM---INK 1654
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQG-IGFLNDPRRLNVALTRARYGIVILGNPKV 800
I+ ++D FQG+EK+ I++SCVR+++ + +GFL D RR+NVALTRA+ I +LG+ +
Sbjct: 1655 SIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRS 1714
Query: 801 LSKQPLWNGLLTHYKEHECLVEG------PLNNLKQSMVQ 834
L+K LW L+ K+ CL P NN QS+++
Sbjct: 1715 LAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNNRAQSILR 1754
>gi|254568798|ref|XP_002491509.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
gi|238031306|emb|CAY69229.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
Length = 2146
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 230/506 (45%), Gaps = 106/506 (20%)
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMA------------------------KQGQGQVLVCAP 442
SLIQGPPGTGKT T IV + + G +VLVCAP
Sbjct: 1293 FSLIQGPPGTGKTKTILGIVGKVLTTRNNLHSTPISIPGAVTSGPRKPETGVRKVLVCAP 1352
Query: 443 SNVAVDQLAEKIS--ATGL-------KVVRLCAKSREAVSSPVEHLTL------------ 481
SN AVD+L ++ G+ KVVRL +A++S V+ LTL
Sbjct: 1353 SNAAVDELVIRLREGVPGISGQMFKPKVVRLGRS--DAINSAVKDLTLEELVDAELNETA 1410
Query: 482 ------------HYQVRHLDTSEKSELHKLQQLK-------------------------D 504
H +V S + L ++ LK D
Sbjct: 1411 RAPKADQSIREKHNKVLAERNSIREALKEVSNLKPEEVKDLQKRYSEITKAKNELGKKLD 1470
Query: 505 EQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQ 562
EQ E S + + +RA + I A +IC T G+ LA F V+IDE+ Q
Sbjct: 1471 EQREEVSVSYRNREIQRRAVQFRILSQAQIICSTLSGSAHDFLATMDTSFDTVVIDEACQ 1530
Query: 563 ATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRL-Q 621
E +IPL G K+ ++VGD QL P ++ + AA QSLF R++ + K + L
Sbjct: 1531 CIELSAIIPLRYGCKRCIMVGDPNQLPPTVLSQAAAEYKYEQSLFVRMMNVHPKSVYLLN 1590
Query: 622 VQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISA 681
VQYRMHP +S FPS FY G L +G + + W P F G+E +
Sbjct: 1591 VQYRMHPQISVFPSKEFYNGKLIDGEGTETKNTRS----WHKKIPPYCFIDVTGKESTNT 1646
Query: 682 SGTSYLNRTEAANVEKIVTTFL---RSGVVPSQIGVITPYEGQ----RAYIVNYMSRNGA 734
S S NR EA V ++ L R S+IGVI+PY+ Q R I+ RN
Sbjct: 1647 SNKSLFNRAEAQAVVSLIDALLGLDRDFNFASKIGVISPYKQQVVLLRDMILRKFGRNIG 1706
Query: 735 LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 794
I+V +VD FQG+EKD I+ SCVR++E +G+GFL D RRLNVALTRA+ ++I
Sbjct: 1707 --------IDVNTVDGFQGQEKDVILFSCVRADETKGVGFLADVRRLNVALTRAKSTLLI 1758
Query: 795 LGNPKVLSKQPLWNGLLTHYKEHECL 820
+G+ LS LW L+ K+
Sbjct: 1759 VGHASNLSGHSLWRHLVQDSKDRNVF 1784
>gi|356501783|ref|XP_003519703.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 928
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 158/446 (35%), Positives = 231/446 (51%), Gaps = 48/446 (10%)
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 463
+RP+ +IQGPPGTGKT ++ +QG+ +VLV AP+N AVD + EK+S GL +VR
Sbjct: 469 KRPVLVIQGPPGTGKTGLLKQLIVCAVQQGE-RVLVTAPTNAAVDNMVEKLSNVGLNIVR 527
Query: 464 LCAKSREAVSSPVEHLTLHYQV-------RHLDTSEKSELHKLQQ--LKDEQGELSSSDE 514
+ +R +S V +L V R +KS+L K + LKD+ L+S
Sbjct: 528 VGNPAR--ISKTVGSKSLEEIVNAKLASFREEYERKKSDLRKDLRHCLKDDS--LASGIR 583
Query: 515 KKYKALKRATER-------EISQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQATEP 566
+ K L R+ ++ E+ SA V+ T GA DP + F V+IDE+ QA EP
Sbjct: 584 QLLKQLGRSLKKKEKQTVVEVLSSAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEP 643
Query: 567 ECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQY 624
C IP++ G K+ +L GD CQL PVI+ +KA GL SL ER L G+ RL QY
Sbjct: 644 SCWIPILQG-KRCILAGDQCQLAPVILSRKALEGGLGISLLERAATLHEGILTTRLTTQY 702
Query: 625 RMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP--VPNRPMFFY--------VQM 674
RM+ +++ + S Y G L++ T+ F P + P+ + +
Sbjct: 703 RMNDAIASWASKEMYGGLLKSSETVFSHLLVNSPFVKPTWITQCPLLLLDTRMPYGSLSV 762
Query: 675 GQEE-ISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRN 732
G EE + +GT S N EA V + V + + +GV P+ I V +PY Q + + +
Sbjct: 763 GCEEHLDPAGTGSLYNEGEAEIVLQHVFSLIYAGVSPTAIAVQSPYVAQVQLLRDKLDE- 821
Query: 733 GALRQQLYKE---IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 789
+ E EVA++DSFQGRE D +ILS VRSN +GFL D RR+NVA+TRAR
Sbjct: 822 -------FPEAAGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRAR 874
Query: 790 YGIVILGNPKVLSKQPLWNGLLTHYK 815
+ ++ + + LL H +
Sbjct: 875 KHLALVCDSSTICHNTFLARLLRHIR 900
>gi|190405466|gb|EDV08733.1| nuclear-localized tRNA splicing complex component [Saccharomyces
cerevisiae RM11-1a]
Length = 2231
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 298/640 (46%), Gaps = 136/640 (21%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VD+ NH FS +S + M T + +++ G Y+ L+G
Sbjct: 1250 LKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVG- 1308
Query: 369 EVEVQMVRNTLPRRFGAPGLP------ELNASQVFA-VKSVLQRPISLIQGPPGTGKTVT 421
++ + + P A + +LN SQ A V SV + SLIQGPPGTGKT T
Sbjct: 1309 --QILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKT 1366
Query: 422 SAAIV-YHMAKQG-----------------------QGQVLVCAPSNVAVDQLAEKISAT 457
I+ Y ++ + + ++L+CAPSN AVD++ ++ +
Sbjct: 1367 ILGIIGYFLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSG 1426
Query: 458 GL---------KVVRLCAKSREAVSSPVEHLTL-----------HYQVRH---------- 487
++VR+ + V+ ++ LTL +Y++R
Sbjct: 1427 VYDKQGHQFKPQLVRVGRS--DVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFNN 1484
Query: 488 ----------------------LDTSEKSELH-KLQQL----------KDEQGELSSSDE 514
+ T + S+L K+++L +DE E +S +
Sbjct: 1485 AVTKRRELRGKLDSESGNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNY 1544
Query: 515 KKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPL 572
+ +R + I +D+IC T G+ LA +F V+IDE+ Q TE +IPL
Sbjct: 1545 RNRDLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPL 1604
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
G K+ ++VGD QL P ++ A+ QSLF R+ P L VQYRMHPS+S+
Sbjct: 1605 RYGGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISK 1663
Query: 633 FPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPNRPM-FFYVQMGQEEISASGTSY 686
FPS+ FY+G L++G +N+R PW P P FF + G++E +A SY
Sbjct: 1664 FPSSEFYQGRLKDGPGMDILNKR-------PWHQLEPLAPYKFFDIISGRQEQNAKTMSY 1716
Query: 687 LNRTEAANVEKIVTTFLRSGV----VPSQIGVITPYEGQRAYIVNYMSRN-GALRQQLYK 741
N E ++V R +IG+I+PY Q + +R G + + K
Sbjct: 1717 TNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGM---INK 1773
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQG-IGFLNDPRRLNVALTRARYGIVILGNPKV 800
I+ ++D FQG+EK+ I++SCVR+++ + +GFL D RR+NVALTRA+ I +LG+ +
Sbjct: 1774 SIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRS 1833
Query: 801 LSKQPLWNGLLTHYKEHECLVEG------PLNNLKQSMVQ 834
L+K LW L+ K+ CL P NN QS+++
Sbjct: 1834 LAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNNRAQSILR 1873
>gi|151940946|gb|EDN59328.1| splicing endonuclease [Saccharomyces cerevisiae YJM789]
Length = 2232
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 298/640 (46%), Gaps = 136/640 (21%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VD+ NH FS +S + M T + +++ G Y+ L+G
Sbjct: 1251 LKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVG- 1309
Query: 369 EVEVQMVRNTLPRRFGAPGLP------ELNASQVFA-VKSVLQRPISLIQGPPGTGKTVT 421
++ + + P A + +LN SQ A V SV + SLIQGPPGTGKT T
Sbjct: 1310 --QILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKT 1367
Query: 422 SAAIV-YHMAKQG-----------------------QGQVLVCAPSNVAVDQLAEKISAT 457
I+ Y ++ + + ++L+CAPSN AVD++ ++ +
Sbjct: 1368 ILGIIGYFLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSG 1427
Query: 458 GL---------KVVRLCAKSREAVSSPVEHLTL-----------HYQVRH---------- 487
++VR+ + V+ ++ LTL +Y++R
Sbjct: 1428 VYDKQGHQFKPQLVRVGRS--DVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFNN 1485
Query: 488 ----------------------LDTSEKSELH-KLQQL----------KDEQGELSSSDE 514
+ T + S+L K+++L +DE E +S +
Sbjct: 1486 AVTKRRELRGKLDSESGNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNY 1545
Query: 515 KKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPL 572
+ +R + I +D+IC T G+ LA +F V+IDE+ Q TE +IPL
Sbjct: 1546 RNRDLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPL 1605
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
G K+ ++VGD QL P ++ A+ QSLF R+ P L VQYRMHPS+S+
Sbjct: 1606 RYGGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISK 1664
Query: 633 FPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPNRPM-FFYVQMGQEEISASGTSY 686
FPS+ FY+G L++G +N+R PW P P FF + G++E +A SY
Sbjct: 1665 FPSSEFYQGRLKDGPGMDILNKR-------PWHQLEPFAPYKFFDIISGRQEQNAKTMSY 1717
Query: 687 LNRTEAANVEKIVTTFLRSGV----VPSQIGVITPYEGQRAYIVNYMSRN-GALRQQLYK 741
N E ++V R +IG+I+PY Q + +R G + + K
Sbjct: 1718 TNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGM---INK 1774
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQG-IGFLNDPRRLNVALTRARYGIVILGNPKV 800
I+ ++D FQG+EK+ I++SCVR+++ + +GFL D RR+NVALTRA+ I +LG+ +
Sbjct: 1775 SIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRS 1834
Query: 801 LSKQPLWNGLLTHYKEHECLVEG------PLNNLKQSMVQ 834
L+K LW L+ K+ CL P NN QS+++
Sbjct: 1835 LAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNNRAQSILR 1874
>gi|398366241|ref|NP_013534.3| putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|3123282|sp|Q00416.2|SEN1_YEAST RecName: Full=Helicase SEN1; AltName: Full=tRNA-splicing endonuclease
positive effector
gi|664872|gb|AAB67502.1| Sen1p [Saccharomyces cerevisiae]
gi|285813835|tpg|DAA09731.1| TPA: putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|392297931|gb|EIW09030.1| Sen1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 2231
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 298/640 (46%), Gaps = 136/640 (21%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VD+ NH FS +S + M T + +++ G Y+ L+G
Sbjct: 1250 LKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVG- 1308
Query: 369 EVEVQMVRNTLPRRFGAPGLP------ELNASQVFA-VKSVLQRPISLIQGPPGTGKTVT 421
++ + + P A + +LN SQ A V SV + SLIQGPPGTGKT T
Sbjct: 1309 --QILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKT 1366
Query: 422 SAAIV-YHMAKQG-----------------------QGQVLVCAPSNVAVDQLAEKISAT 457
I+ Y ++ + + ++L+CAPSN AVD++ ++ +
Sbjct: 1367 ILGIIGYFLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSG 1426
Query: 458 GL---------KVVRLCAKSREAVSSPVEHLTL-----------HYQVRH---------- 487
++VR+ + V+ ++ LTL +Y++R
Sbjct: 1427 VYDKQGHQFKPQLVRVGRS--DVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFNN 1484
Query: 488 ----------------------LDTSEKSELH-KLQQL----------KDEQGELSSSDE 514
+ T + S+L K+++L +DE E +S +
Sbjct: 1485 AVTKRRELRGKLDSESGNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNY 1544
Query: 515 KKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPL 572
+ +R + I +D+IC T G+ LA +F V+IDE+ Q TE +IPL
Sbjct: 1545 RNRDLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPL 1604
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
G K+ ++VGD QL P ++ A+ QSLF R+ P L VQYRMHPS+S+
Sbjct: 1605 RYGGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISK 1663
Query: 633 FPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPNRPM-FFYVQMGQEEISASGTSY 686
FPS+ FY+G L++G +N+R PW P P FF + G++E +A SY
Sbjct: 1664 FPSSEFYQGRLKDGPGMDILNKR-------PWHQLEPLAPYKFFDIISGRQEQNAKTMSY 1716
Query: 687 LNRTEAANVEKIVTTFLRSGV----VPSQIGVITPYEGQRAYIVNYMSRN-GALRQQLYK 741
N E ++V R +IG+I+PY Q + +R G + + K
Sbjct: 1717 TNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGM---INK 1773
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQG-IGFLNDPRRLNVALTRARYGIVILGNPKV 800
I+ ++D FQG+EK+ I++SCVR+++ + +GFL D RR+NVALTRA+ I +LG+ +
Sbjct: 1774 SIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRS 1833
Query: 801 LSKQPLWNGLLTHYKEHECLVEG------PLNNLKQSMVQ 834
L+K LW L+ K+ CL P NN QS+++
Sbjct: 1834 LAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNNRAQSILR 1873
>gi|395829539|ref|XP_003787913.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal proliferator-activated
receptor A-interacting complex 285 kDa protein-like
[Otolemur garnettii]
Length = 2953
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 241/510 (47%), Gaps = 85/510 (16%)
Query: 387 GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ---------- 436
G +LN SQ AV+ L++P ++IQGPPGTGKTV I+Y K Q +
Sbjct: 2453 GCHKLNPSQNGAVREALEKPFTVIQGPPGTGKTVVGLHIIYWFHKSNQEERQPSGTPGGE 2512
Query: 437 -------VLVCAPSNVAVDQLAEKI-SATGLKVVRLCAKSREAVSSPV------------ 476
+L C PSN +VD LA + LK +R+ + EA PV
Sbjct: 2513 NGPRDPCILYCGPSNKSVDVLAGLLLRRAELKPLRVYGEQAEASEFPVPGVGNNGLLKKT 2572
Query: 477 ----------EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKY-----KALK 521
+TLH+++R +E+ + E SS D Y KA K
Sbjct: 2573 PRDGRPNPALRSITLHHRIRQASNPHATEIKAFDARVQKGEEFSSEDLLLYRTILGKARK 2632
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVL--GAKQV 579
ER I VI CTC A P L RQVL+DE+ ATEPE LIPLV A++V
Sbjct: 2633 FELERHI-----VILCTCSCAASPSLRKLDVRQVLVDEAGMATEPETLIPLVHFPQAEKV 2687
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFY 639
VL+GDH QL PV+ ++ R GL QSLFER L QYRMH + FPS FY
Sbjct: 2688 VLLGDHKQLRPVVKNEQLQRLGLDQSLFER---YHGDAYMLDTQYRMHEGICAFPSMEFY 2744
Query: 640 EGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIV 699
+G L+ G + R+ S I + P+ F GQE+ T N + AN++++
Sbjct: 2745 KGKLKTGAGL--RRPSSILGHANKESCPVIFGYMQGQEQSLLVSTDEGNESSKANLKEVA 2802
Query: 700 TTF-------LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQ 752
L V P I ++TPY Q + I R G L++ + + V+S+ Q
Sbjct: 2803 VVVHIAKQLTLGRTVEPKDIAILTPYNAQASEI-----RKGLLKEGVTG-VTVSSITKSQ 2856
Query: 753 GREKDYIILSCVRSNEH-------------QGIGFLNDPRRLNVALTRARYGIVILGNPK 799
G E Y+++S VR+ + +GF+ DP ++NVA+TRA+ G+ ++G+
Sbjct: 2857 GSEWRYVLVSTVRTCAQSDLDQQPTKGWLRKFLGFVVDPNQVNVAITRAQEGLCLIGDHL 2916
Query: 800 VLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
+L PLW LL + + LV P N+++
Sbjct: 2917 LLRCCPLWKHLLDFCEAQQSLV--PANHVQ 2944
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 203/503 (40%), Gaps = 91/503 (18%)
Query: 378 TLPRRFGAPGLPELNASQVFAVKSVLQR--------PISLIQGPPGTGKTVTSAAIVYHM 429
LPR AP N Q A+ + R P LI GP GTGKT T A +
Sbjct: 751 VLPRPLPAPSSVRGNCKQKLAMALIAGRGPVDGRPVPPLLIYGPFGTGKTYTLAMASLEV 810
Query: 430 AKQGQGQVLVCAPSNVAVDQLAEK-----ISATGLKVVRLCAKSREAVSSPVEHLTLHYQ 484
+Q +VL+C +N A D + +S+ + L + S + TL Y
Sbjct: 811 IRQPYTKVLICTHTNSAADIYVREYFHNFVSSGHAEAAPLRVMYTDRPPSQTDATTLRYC 870
Query: 485 VRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGD 544
+D ++A + T+ E+ Q V+ T A +
Sbjct: 871 CLSVD---------------------------HRAFRPPTDAELVQH-RVVVSTTSQARE 902
Query: 545 PRLANFRFRQVLIDESTQATEPECLIPLVLG--AKQVVLVGDHCQLGPVIMCKKAARAGL 602
R+ + F +LIDE+ Q E E L PL + +VVL GDH Q+ P + ARA
Sbjct: 903 LRVPSGFFSHILIDEAAQMLECEALTPLAYASPSTRVVLAGDHMQVTPRLF--SVARAQS 960
Query: 603 AQ-SLFERLV---------LLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
A+ +L RL L + YR ++ F S FY L G+
Sbjct: 961 AEHTLLYRLFLHYQQETHELAKQSRVIFHENYRSTQAIVSFVSRHFY---LAKGIC---- 1013
Query: 653 QSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAAN-VEKIVTTFLRSGVVPSQ 711
+SG P + P+ F +G+ E S TS+LN E VEK+ + P
Sbjct: 1014 -ASG-SVPRHPRHYPLSFCHVVGRPERDLSMTSWLNLAEIIQVVEKVQEVW---DTWPCC 1068
Query: 712 IGVITPYEGQRAYI--VNYMSRNGALRQQLYK----EIEVASVDSFQGREKDYIILSCVR 765
G ++ YI V++ ++ ALRQ+L + E+ V S + GRE ++LS V
Sbjct: 1069 WG-----SREQRYICAVSHGAQVSALRQELRRRSLGEVSVGSFEILPGREFRVVVLSTVH 1123
Query: 766 -SNEHQGIG-----FLNDPRRLNVALTRARYGIVILGNPKVLSK----QPLWNGLLTH-Y 814
S+ G G F D R LN +TRA+ +V +G+ L LW +
Sbjct: 1124 NSDTLLGPGAPAAEFFTDARVLNTVMTRAQSQLVAVGDAVALCSFGTCSKLWKSFIRECV 1183
Query: 815 KEHECLVEG-PLNNLKQSMVQFQ 836
+H +G L ++QS+ Q Q
Sbjct: 1184 AQHSVCPKGLSLEQIEQSVAQRQ 1206
>gi|256271104|gb|EEU06199.1| Sen1p [Saccharomyces cerevisiae JAY291]
Length = 2231
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 298/640 (46%), Gaps = 136/640 (21%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VD+ NH FS +S + M T + +++ G Y+ L+G
Sbjct: 1250 LKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVG- 1308
Query: 369 EVEVQMVRNTLPRRFGAPGLP------ELNASQVFA-VKSVLQRPISLIQGPPGTGKTVT 421
++ + + P A + +LN SQ A V SV + SLIQGPPGTGKT T
Sbjct: 1309 --QILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKT 1366
Query: 422 SAAIV-YHMAKQG-----------------------QGQVLVCAPSNVAVDQLAEKISAT 457
I+ Y ++ + + ++L+CAPSN AVD++ ++ +
Sbjct: 1367 ILGIIGYFLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSG 1426
Query: 458 GL---------KVVRLCAKSREAVSSPVEHLTL-----------HYQVRH---------- 487
++VR+ + V+ ++ LTL +Y++R
Sbjct: 1427 VYDKQGHQFKPQLVRVGRS--DVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFNN 1484
Query: 488 ----------------------LDTSEKSELH-KLQQL----------KDEQGELSSSDE 514
+ T + S+L K+++L +DE E +S +
Sbjct: 1485 AVTKRRELRGKLDSESGNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNY 1544
Query: 515 KKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPL 572
+ +R + I +D+IC T G+ LA +F V+IDE+ Q TE +IPL
Sbjct: 1545 RNRDLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPL 1604
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
G K+ ++VGD QL P ++ A+ QSLF R+ P L VQYRMHPS+S+
Sbjct: 1605 RYGGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISK 1663
Query: 633 FPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPNRPM-FFYVQMGQEEISASGTSY 686
FPS+ FY+G L++G +N+R PW P P FF + G++E +A SY
Sbjct: 1664 FPSSEFYQGRLKDGPGMDILNKR-------PWHQLEPLAPYKFFDIISGRQEQNAKTMSY 1716
Query: 687 LNRTEAANVEKIVTTFLRSGV----VPSQIGVITPYEGQRAYIVNYMSRN-GALRQQLYK 741
N E ++V R +IG+I+PY Q + +R G + + K
Sbjct: 1717 TNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGM---INK 1773
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQG-IGFLNDPRRLNVALTRARYGIVILGNPKV 800
I+ ++D FQG+EK+ I++SCVR+++ + +GFL D RR+NVALTRA+ I +LG+ +
Sbjct: 1774 SIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRS 1833
Query: 801 LSKQPLWNGLLTHYKEHECLVEG------PLNNLKQSMVQ 834
L+K LW L+ K+ CL P NN QS+++
Sbjct: 1834 LAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNNRAQSILR 1873
>gi|349580123|dbj|GAA25284.1| K7_Sen1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 2233
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 298/640 (46%), Gaps = 136/640 (21%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VD+ NH FS +S + M T + +++ G Y+ L+G
Sbjct: 1252 LKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVG- 1310
Query: 369 EVEVQMVRNTLPRRFGAPGLP------ELNASQVFA-VKSVLQRPISLIQGPPGTGKTVT 421
++ + + P A + +LN SQ A V SV + SLIQGPPGTGKT T
Sbjct: 1311 --QILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKT 1368
Query: 422 SAAIV-YHMAKQG-----------------------QGQVLVCAPSNVAVDQLAEKISAT 457
I+ Y ++ + + ++L+CAPSN AVD++ ++ +
Sbjct: 1369 ILGIIGYFLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSG 1428
Query: 458 GL---------KVVRLCAKSREAVSSPVEHLTL-----------HYQVRH---------- 487
++VR+ + V+ ++ LTL +Y++R
Sbjct: 1429 VYDKQGHQFKPQLVRVGRS--DVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFNN 1486
Query: 488 ----------------------LDTSEKSELH-KLQQL----------KDEQGELSSSDE 514
+ T + S+L K+++L +DE E +S +
Sbjct: 1487 AVTKRRELRGKLDSESGNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNY 1546
Query: 515 KKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPL 572
+ +R + I +D+IC T G+ LA +F V+IDE+ Q TE +IPL
Sbjct: 1547 RNRDLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPL 1606
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
G K+ ++VGD QL P ++ A+ QSLF R+ P L VQYRMHPS+S+
Sbjct: 1607 RYGGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISK 1665
Query: 633 FPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPNRPM-FFYVQMGQEEISASGTSY 686
FPS+ FY+G L++G +N+R PW P P FF + G++E +A SY
Sbjct: 1666 FPSSEFYQGRLKDGPGMDILNKR-------PWHQLEPLAPYKFFDIISGRQEQNAKTMSY 1718
Query: 687 LNRTEAANVEKIVTTFLRSGV----VPSQIGVITPYEGQRAYIVNYMSRN-GALRQQLYK 741
N E ++V R +IG+I+PY Q + +R G + + K
Sbjct: 1719 TNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGM---INK 1775
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQG-IGFLNDPRRLNVALTRARYGIVILGNPKV 800
I+ ++D FQG+EK+ I++SCVR+++ + +GFL D RR+NVALTRA+ I +LG+ +
Sbjct: 1776 SIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRS 1835
Query: 801 LSKQPLWNGLLTHYKEHECLVEG------PLNNLKQSMVQ 834
L+K LW L+ K+ CL P NN QS+++
Sbjct: 1836 LAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNNRAQSILR 1875
>gi|391871546|gb|EIT80706.1| DNA helicase [Aspergillus oryzae 3.042]
Length = 728
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 249/490 (50%), Gaps = 83/490 (16%)
Query: 379 LPRRFGAPGL-----PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQ 432
LP +GA G P LN SQ A++ L R I+LI GPPGTGKT T ++ M Q
Sbjct: 230 LPPDYGAVGDVEFNDPSLNDSQKEAIRFALASRDIALIHGPPGTGKTHTLIELILQMV-Q 288
Query: 433 GQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE 492
+ +VLVC PSN++VD + E+++ + VVR+ +R + S +EH +V +
Sbjct: 289 RKLRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPAR-LLPSVLEH---SLEVLTHTSDA 344
Query: 493 KSELHKLQQLKDEQGELSSSDEKKYKALKRATEREIS------------------QSADV 534
S + +++ D++ ++S + ++ KRA +++ + + V
Sbjct: 345 ASIVRDVRKEIDQK--VASIRKTRFGREKRAIYQDLKELRREFRERESKCVDNLVRESSV 402
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+ T GAG +L N +F V+IDE++QA E +C I L L A +VVL GDH QL P +
Sbjct: 403 VLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWISL-LSASKVVLAGDHLQLPPTVKS 461
Query: 595 ----KKAARAG-----------------LAQSLFERLVLLGLKPIR--LQVQYRMHPSLS 631
K +AG L ++F+RL+ L + I+ L QYRMH ++
Sbjct: 462 TDQKSKDVKAGKVDTVNDGDNGVLGKMSLETTMFDRLLSLHGESIKRMLTTQYRMHETIM 521
Query: 632 EFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP-----NRPMFFY-------------VQ 673
FPS+ YE L G + R D P+ V P+ F+ +
Sbjct: 522 RFPSDELYESKLMAGDAVKARLLK--DLPYDVEETDDTKEPLVFWDTQGGDFPEKTEDKE 579
Query: 674 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNG 733
+GQ+E + G S N EA V K V ++SG+ P I VITPY GQ A I++ M R
Sbjct: 580 VGQKE-ALLGESKSNEMEAMVVAKHVDNLVQSGLKPEDIAVITPYNGQLA-ILSQMLR-- 635
Query: 734 ALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV 793
+ Y IE+ SVD FQGREK+ +++S VRSN +GFL + RRLNVA+TR + +
Sbjct: 636 ----EKYPGIELGSVDGFQGREKEAVVVSLVRSNSENEVGFLGEKRRLNVAMTRPKRHLC 691
Query: 794 ILGNPKVLSK 803
+ G+ + +SK
Sbjct: 692 VCGDSETISK 701
>gi|259148407|emb|CAY81654.1| Sen1p [Saccharomyces cerevisiae EC1118]
Length = 2230
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 298/640 (46%), Gaps = 136/640 (21%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VD+ NH FS +S + M T + +++ G Y+ L+G
Sbjct: 1249 LKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVG- 1307
Query: 369 EVEVQMVRNTLPRRFGAPGLP------ELNASQVFA-VKSVLQRPISLIQGPPGTGKTVT 421
++ + + P A + +LN SQ A V SV + SLIQGPPGTGKT T
Sbjct: 1308 --QILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKT 1365
Query: 422 SAAIV-YHMAKQG-----------------------QGQVLVCAPSNVAVDQLAEKISAT 457
I+ Y ++ + + ++L+CAPSN AVD++ ++ +
Sbjct: 1366 ILGIIGYFLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSG 1425
Query: 458 GL---------KVVRLCAKSREAVSSPVEHLTL-----------HYQVRH---------- 487
++VR+ + V+ ++ LTL +Y++R
Sbjct: 1426 VYDKQGHQFKPQLVRVGRS--DVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFNN 1483
Query: 488 ----------------------LDTSEKSELH-KLQQL----------KDEQGELSSSDE 514
+ T + S+L K+++L +DE E +S +
Sbjct: 1484 AVTKRRELRGKLDSESGNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNY 1543
Query: 515 KKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPL 572
+ +R + I +D+IC T G+ LA +F V+IDE+ Q TE +IPL
Sbjct: 1544 RNRDLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPL 1603
Query: 573 VLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSE 632
G K+ ++VGD QL P ++ A+ QSLF R+ P L VQYRMHPS+S+
Sbjct: 1604 RYGGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISK 1662
Query: 633 FPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPNRPM-FFYVQMGQEEISASGTSY 686
FPS+ FY+G L++G +N+R PW P P FF + G++E +A SY
Sbjct: 1663 FPSSEFYQGRLKDGPGMDILNKR-------PWHQLEPLAPYKFFDIISGRQEQNAKTMSY 1715
Query: 687 LNRTEAANVEKIVTTFLRSGV----VPSQIGVITPYEGQRAYIVNYMSRN-GALRQQLYK 741
N E ++V R +IG+I+PY Q + +R G + + K
Sbjct: 1716 TNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGM---INK 1772
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQG-IGFLNDPRRLNVALTRARYGIVILGNPKV 800
I+ ++D FQG+EK+ I++SCVR+++ + +GFL D RR+NVALTRA+ I +LG+ +
Sbjct: 1773 SIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRS 1832
Query: 801 LSKQPLWNGLLTHYKEHECLVEG------PLNNLKQSMVQ 834
L+K LW L+ K+ CL P NN QS+++
Sbjct: 1833 LAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNNRAQSILR 1872
>gi|402220492|gb|EJU00563.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 868
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 231/476 (48%), Gaps = 64/476 (13%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKT--VTSAAIVYHMAKQGQGQVLVCA 441
G P L +LN +Q AV +L + +SL+QGPPGTGKT + AA + + + +LV
Sbjct: 345 GDPVL-DLNETQTRAVALMLSKRLSLVQGPPGTGKTKTIIEAARLLKLHFEVPQPLLVAT 403
Query: 442 PSNVAVDQLAEKISATGLKVVRL------------------------CAKSREAVSSPVE 477
+NVAVD L ++A GL+ +R+ K E + ++
Sbjct: 404 YTNVAVDNLVAGLAAAGLRPLRVGGEEYSQQPKLDKHRLEVKIAAHPLQKEVEKLEKAID 463
Query: 478 HLTLHYQVRHLDTSEKSE-LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVIC 536
L+ + +D ++ S+ ++++ K+ E + K A++ A +I ADV+C
Sbjct: 464 KLS-DRRREAIDAAKPSKNEERIERAKNTHKEHLLRLKMKKFAIRNAMIHDIVSKADVVC 522
Query: 537 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
TC+ + + L F V +DE++ +TEP LIPL+ G++ V L+GDH QL P+I +
Sbjct: 523 TTCLTSANTALNVIDFPVVFLDEASMSTEPASLIPLMKGSRHVALIGDHKQLPPIITSAE 582
Query: 597 AARAGLAQSLFERLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
A GL++SLFERL G P I L +QYRMHPS+S FPS FY TL++G +
Sbjct: 583 AQAGGLSKSLFERLTEEGDTPSIMLDMQYRMHPSISRFPSAQFYNKTLRDGTV----DHA 638
Query: 656 GIDFPWPVPNRPMFF------YVQMGQEEISA-----------SGTSYLNRTEAANVEKI 698
G P P + +Q +E +S S +N EA V I
Sbjct: 639 GKVRPSLAPPKSTLLDDESVSELQTEKERLSVVFVDHAGSEAKKDRSRINAGEAQMVCSI 698
Query: 699 VTTFL--RSGVVPSQIGVITPYEGQRAYIVNYMSRN-----------GALRQQLYKEIEV 745
V L + IG+I PY Q + + + G R IEV
Sbjct: 699 VEELLYCNPSMTGDDIGIIAPYVAQIRLLDRLLKHDQEQAERFKSTLGEHRGLQMSNIEV 758
Query: 746 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
+VD F+GREK+ II S VR+N IGFL D RRLNV LTRAR + +LGN L
Sbjct: 759 KTVDGFEGREKEVIIFSTVRNNPQGAIGFLADGRRLNVGLTRARRALFVLGNAGTL 814
>gi|417405556|gb|JAA49487.1| Putative dna replication helicase [Desmodus rotundus]
Length = 1000
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 243/463 (52%), Gaps = 53/463 (11%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P L+ASQ AV L QR +++I GPPGTGKT T I+ ++G +VL CAPSNVAV
Sbjct: 187 PSLDASQQEAVLFALSQRELAIIHGPPGTGKTTTVVEIILQAVERGL-KVLCCAPSNVAV 245
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE---------KSELHK 498
D L E ++ G +V+RL +R + ++ L + D+++ L K
Sbjct: 246 DNLVEALARCGRRVLRLGHPAR--LLESIQQHCLDAALSRGDSTQIVADIRRDIDQVLVK 303
Query: 499 LQQLKDEQGELSSSDE-----KKYKALKRATEREISQSADVICCTCVGA---GDPRLA-- 548
L++ +D++ + + +E K+ K + A E +SADVI T GA G RL
Sbjct: 304 LKKTQDKREKSNFRNEVKLLRKELKEREEAATLESLRSADVILATNTGASSDGPLRLLPD 363
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
+F F V++DE QA E C +PL L A + +L GDH QL P ++ KAA+ GL+ SL E
Sbjct: 364 DF-FDMVVVDECAQALEASCWVPL-LKASKCILAGDHKQLPPTVVSPKAAQEGLSLSLME 421
Query: 609 RLV-LLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER---------QSSGI 657
RL G +R L VQYRMH ++ ++ S + YEG L ++ ER +
Sbjct: 422 RLAGQCGAGVLRTLTVQYRMHRAIMQWASEALYEGQLTAHPSVAERLLRDLPGVAATEET 481
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
P + + ++ QE+ + G N E V V + +GV S I VITP
Sbjct: 482 GLPLLLVDTAGCGLSELEQEDDQSRG----NPGEVRLVSLHVQALVDAGVRASDIAVITP 537
Query: 718 YEGQRAYIVNYMSRNGALRQQL---YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
Y Q V+ LRQ L + E+E+ SVD FQGREK+ ++LS VRSN +GF
Sbjct: 538 YNLQ----VDL------LRQSLTHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGF 587
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
L + RR+NVA+TRAR + ++ + + +S P L+ ++ EH
Sbjct: 588 LAEDRRINVAVTRARRHVAVICDSRTVSNHPFLKTLVDYFTEH 630
>gi|190346052|gb|EDK38051.2| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 254/510 (49%), Gaps = 101/510 (19%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-YHMAK---------------- 431
++N SQ A+ S R SLIQGPPGTGKT T IV Y++++
Sbjct: 683 KVNESQANAIISTHNRSGFSLIQGPPGTGKTKTILGIVGYNLSQDVPSGLIEVDGQQGKP 742
Query: 432 QGQGQVLVCAPSNVAVDQLA------------EKISATGLKVVRLCAKSREAVSSPVEHL 479
Q ++LVCAPSN AVD+L E+I+ + VVRL +AV+S V L
Sbjct: 743 QTSSKILVCAPSNAAVDELVVRLRDGVFNFKGERITPS---VVRLGRS--DAVNSAVRDL 797
Query: 480 TLHYQV-RHLDTS-------------------EKSELH------------------KLQQ 501
TL V + L T+ E+ L +L++
Sbjct: 798 TLEELVDKQLQTTVQHVARDPEVRAEHTKLVKERDSLRQSLQSTTLSDEEFTQMESRLRE 857
Query: 502 LKDEQGELSSS-DEKKYKAL---------KRATEREISQSADVICCTCVGAGDPRLANF- 550
+ ++ EL+ DE++ A +R + +I ++ +IC T G+ LA+
Sbjct: 858 VNKKRNELAKKLDEQRENAAVAYRSRELERRQLQAKILNTSQIICSTLSGSAHDFLASLG 917
Query: 551 -RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F +V+IDE+ Q E +IPL G + ++VGD QL P ++ + AA +SLF R
Sbjct: 918 ITFEKVIIDEACQCVELSAIIPLRYGCTKCIMVGDPKQLPPTVLSQTAASLNYDKSLFVR 977
Query: 610 LV-LLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNR 666
+ L VQYRMHP +S FPS FY L +G + E+ + PW VP
Sbjct: 978 MQEQFPDSAYLLDVQYRMHPDISRFPSAEFYRSRLHDGAGMLEKNTR----PWHSEVPFS 1033
Query: 667 PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-----SQIGVITPYEGQ 721
P F+ +G+ + S S NR EA V ++V + ++P +IGVI+PY+ Q
Sbjct: 1034 PYRFFDIVGKHQQHESSRSLYNRAEAQVVLEMVDHLMY--MLPPKEFRGRIGVISPYKEQ 1091
Query: 722 RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
+ + ++ +Q++ E++ +VD +QG+EK+ II+SCVR++E +GFL+D RR+
Sbjct: 1092 IRTLKDIFAKKYG--RQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRM 1149
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLL 811
NVALTRAR + ILGN K L + +W+ LL
Sbjct: 1150 NVALTRARTTLWILGNQKSLMRNKVWSRLL 1179
>gi|224613390|gb|ACN60274.1| Peroxisomal proliferator-activated receptor A-interacting complex
285 kDa protein [Salmo salar]
Length = 509
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 226/494 (45%), Gaps = 74/494 (14%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ------------- 436
+LN SQ A+K L +LIQGPPGTGKTV +VY Q Q
Sbjct: 1 DLNISQTRAIKEALDNRFTLIQGPPGTGKTVVGVHLVYWFFLQNQKDPNHLRPKAVGGSS 60
Query: 437 ----VLVCAPSNVAVDQLAEKISATG--LKVVRLCAKSREAVSSP--------------- 475
+L C PSN +VD +A ++ LK +R+ ++ E + P
Sbjct: 61 KRKCILYCGPSNKSVDVVAGQLLKLRKVLKPLRVYSEQMEMLEFPYPGSNLKLSRRSIRE 120
Query: 476 ------VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREIS 529
+ +TLH+ +R + +E+ +L+ + + YK L
Sbjct: 121 ERPKRELSSITLHHLIRMPENPFSNEIIYFDARIQRGEDLTDKEIESYKVLLSQARNHEL 180
Query: 530 QSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA-KQVVLVGDHCQL 588
DVI CTC A +P +Q++IDE ATEPE IPLV +Q+VL+GDH QL
Sbjct: 181 MRHDVILCTCTAASNPNFYKLDLKQIIIDECAMATEPEAFIPLVTHKPEQIVLLGDHKQL 240
Query: 589 GPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVT 648
P+ +AR G+ +SLFER + K + L QYRMH + EFPS FY G L+ G T
Sbjct: 241 QPITHSDLSARLGMRKSLFERYM---EKALMLDTQYRMHERICEFPSKEFYNGILKTGAT 297
Query: 649 INERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGT------SYLNRTEAANVEKIVTTF 702
+ + P+ F G+E T S N EA +I +
Sbjct: 298 PKD----SVLLAQSHHLTPILFGHVSGKEISLVVSTERGNENSKANSAEAEESVRIASLL 353
Query: 703 LR-SGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
++ +GV S I ++TPY Q A + N L + + + V ++ QG E Y+IL
Sbjct: 354 IKHAGVAASDIAILTPYNAQVAKV------NETLLMKHIQNVNVNTITKSQGSEWRYVIL 407
Query: 762 SCVRSNEHQGI-------------GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
S VRS I GF+ DP ++NV +TRA+ G+ I+GN ++L LW
Sbjct: 408 STVRSCPKSEIDTEPTKAWLTKKLGFVMDPNQVNVGITRAQEGLCIIGNQELLRCSSLWK 467
Query: 809 GLLTHYKEHECLVE 822
LL HY++ C+V+
Sbjct: 468 RLLVHYQQCGCVVD 481
>gi|169777529|ref|XP_001823230.1| DNA polymerase alpha-associated DNA helicase A [Aspergillus oryzae
RIB40]
gi|83771967|dbj|BAE62097.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 720
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 249/490 (50%), Gaps = 83/490 (16%)
Query: 379 LPRRFGAPGL-----PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQ 432
LP +GA G P LN SQ A++ L R I+LI GPPGTGKT T ++ M Q
Sbjct: 222 LPPDYGAVGDVEFNDPSLNDSQKEAIRFALASRDIALIHGPPGTGKTHTLIELILQMV-Q 280
Query: 433 GQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE 492
+ +VLVC PSN++VD + E+++ + VVR+ +R + S +EH +V +
Sbjct: 281 RKLRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPAR-LLPSVLEH---SLEVLTHTSDA 336
Query: 493 KSELHKLQQLKDEQGELSSSDEKKYKALKRATEREIS------------------QSADV 534
S + +++ D++ ++S + ++ KRA +++ + + V
Sbjct: 337 ASIVRDVRKEIDQK--VASIRKTRFGREKRAIYQDLKELRREFRERESKCVDNLVRESSV 394
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+ T GAG +L N +F V+IDE++QA E +C I L L A +VVL GDH QL P +
Sbjct: 395 VLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWISL-LSASKVVLAGDHLQLPPTVKS 453
Query: 595 ----KKAARAG-----------------LAQSLFERLVLLGLKPIR--LQVQYRMHPSLS 631
K +AG L ++F+RL+ L + I+ L QYRMH ++
Sbjct: 454 TDQKSKDVKAGKVDTVNDGDNGVLGKMSLETTMFDRLLSLHGESIKRMLTTQYRMHETIM 513
Query: 632 EFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP-----NRPMFFY-------------VQ 673
FPS+ YE L G + R D P+ V P+ F+ +
Sbjct: 514 RFPSDELYESKLMAGDAVKARLLK--DLPYDVEETDDTKEPLVFWDTQGGDFPEKTEDKE 571
Query: 674 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNG 733
+GQ+E + G S N EA V K V ++SG+ P I VITPY GQ A I++ M R
Sbjct: 572 VGQKE-ALLGESKSNEMEAMVVAKHVDNLVQSGLKPEDIAVITPYNGQLA-ILSQMLR-- 627
Query: 734 ALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV 793
+ Y IE+ SVD FQGREK+ +++S VRSN +GFL + RRLNVA+TR + +
Sbjct: 628 ----EKYPGIELGSVDGFQGREKEAVVVSLVRSNSENEVGFLGEKRRLNVAMTRPKRHLC 683
Query: 794 ILGNPKVLSK 803
+ G+ + +SK
Sbjct: 684 VCGDSETISK 693
>gi|66804901|ref|XP_636183.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
gi|60464558|gb|EAL62696.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
Length = 1677
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 228/435 (52%), Gaps = 51/435 (11%)
Query: 390 ELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIV-YHMAKQGQGQVLVCAPSNVAV 447
+LN SQ+ A+KS L + I+LIQGPPGTGKT T ++ +A + ++LVC PS+ +V
Sbjct: 1192 KLNESQLNAIKSSLVESGITLIQGPPGTGKTTTINYLLSVLLAIDKKFKILVCGPSHASV 1251
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQG 507
D++A++ C K+ + ++ K ++ +
Sbjct: 1252 DEVAKR-----------CLKNL--------------------LNSDGQIFKPNMVRTGRK 1280
Query: 508 ELSSSDEKKYKALKRATEREIS--QSADVICCTCVGAGDPRL-ANFRFRQVLIDESTQAT 564
E S + +K + + R I+ +SA ++ T G+G + NF VLIDESTQ++
Sbjct: 1281 EKISPECQKISLKNKNSSRRINLIKSASIVFSTLAGSGSKAIFENFSPDIVLIDESTQSS 1340
Query: 565 EPECLIPLVLGA-KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQ-- 621
EP +IPL LG+ K+++LVGD QL P I K+ A GL SLFERL K I +Q
Sbjct: 1341 EPTSIIPLSLGSVKKLILVGDPVQLPPTIFSKQGADCGLKISLFERLA----KSIDVQFL 1396
Query: 622 -VQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEIS 680
QYRMHP S+F S FY GTL++G ++ + F + PM F+ + +
Sbjct: 1397 NTQYRMHPVTSKFISEEFYNGTLKDGENVSIDSYNNCKFHFDPSFGPMKFF-DLPKSNQK 1455
Query: 681 ASGTSYLNRTEAANVEKIVTTFLRS--GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQ 738
S +N+ E V ++ + G+ITPY+ Q I ++R+ +
Sbjct: 1456 VIKKSIMNQDEIDKVFTLIKELIEKYPECKKLSFGIITPYKLQMNQIKEQLNRS----EH 1511
Query: 739 LYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNP 798
I V+++D QG EKD II+SCVRS E GIGFL+D RR+NVALTRA+ G+ ++G
Sbjct: 1512 HNLNISVSTIDGVQGSEKDIIIMSCVRSIEKFGIGFLSDRRRINVALTRAKLGLYVIGTY 1571
Query: 799 KVLSKQPLWNGLLTH 813
KVL+K W L H
Sbjct: 1572 KVLAKDNTWEKFLIH 1586
>gi|440291801|gb|ELP85043.1| splicing endonuclease positive effector sen1, putative [Entamoeba
invadens IP1]
Length = 1569
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 240/485 (49%), Gaps = 64/485 (13%)
Query: 390 ELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIV------------YHMAKQGQGQ 436
E N SQ+ A+ +S+ + SLIQGPPGTGKT+T I+ ++ +
Sbjct: 277 EFNDSQIHAMFRSLAKSGFSLIQGPPGTGKTMTLCGIIGVILYGNSSSVFSKSSESHHER 336
Query: 437 VLVCAPSNVAVDQLAEKISATG----------LKVVRLCAKS-----------REAVSSP 475
VL+C+PSN A+D + K+ G +K+VR+ + V
Sbjct: 337 VLICSPSNAAIDGIIMKLLKMGVYDENGEKKSVKIVRVGTPTLTNPEIKDLVLENLVGKE 396
Query: 476 VE---HLTLHY---QVRHLDTSEKSEL---HKLQQLKDEQG---ELSSSDEKKYK--ALK 521
+E ++L Y ++ L K+ L K+ + K + G L D+ + K A+K
Sbjct: 397 IERRGEMSLEYLDKKINELKEKLKNALATNAKINKDKLKSGLALLLKQKDDLQNKICAMK 456
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQV---LIDESTQATEPECLIPLVLGAKQ 578
+ +I + DVICCT AG L F ++ +IDE+ Q E LIPL G ++
Sbjct: 457 HSVTIDIISNCDVICCTLNSAGCDTLQQHLFGKIETCIIDEAVQCVEVSALIPLKYGVER 516
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSF 638
+++GD QL ++ K+ +SLFERL+ GL L QYRM + EFPSN F
Sbjct: 517 CIMIGDQKQLPSTVLSPKSITYKYNKSLFERLLECGLNVTLLTQQYRMESKIREFPSNEF 576
Query: 639 YEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKI 698
YEG L +GV I + S V N +F V G+E+ +S N E V +
Sbjct: 577 YEGRLADGVKIEKINS--------VSNSVLFLNV-CGKEDRLGKESSLFNTEEVKAVVFL 627
Query: 699 VTTFLRS-GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKD 757
+T ++ V IG+ITPY Q + + +N + + V +VD FQGRE D
Sbjct: 628 LTEISKNVECVHWDIGIITPYRKQVLDVKKAIEQNEVAKSL---NVLVNTVDGFQGREFD 684
Query: 758 YIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+I+SCVRS+EH GIGF+ D RRLNVA+TRA+ + ++GN K L + +W + ++
Sbjct: 685 IVIMSCVRSSEHNGIGFVEDERRLNVAITRAKRALCVVGNIKTLRQVKVWEDYINWLTKN 744
Query: 818 ECLVE 822
++E
Sbjct: 745 RLILE 749
>gi|452989270|gb|EME89025.1| hypothetical protein MYCFIDRAFT_55523 [Pseudocercospora fijiensis
CIRAD86]
Length = 1999
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 256/548 (46%), Gaps = 114/548 (20%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQ----------------- 432
LNA+Q AV L+ +LIQGPPG+GKT T AIV + Q
Sbjct: 1281 LNAAQSEAVNGALENEGFTLIQGPPGSGKTKTIVAIVGGLLSQTLANNPRGATRISVPAA 1340
Query: 433 --------GQGQVLVCAPSNVAVDQLAEKISAT---------GLKVVRLCAKSREAVSSP 475
++LVCAPSN AVD+L ++ + VVRL +A+++
Sbjct: 1341 NSNFASDSASKKLLVCAPSNAAVDELVIRLKQGVKTKNGQNHAINVVRLG--RSDAINTQ 1398
Query: 476 VEHLTLHYQV-------RHLDTSEK---SELHKLQ-----QLKDEQGELSSSD------E 514
V +T+ V D ++ +EL K QL++ + ++D E
Sbjct: 1399 VRDVTMDELVAKKLGGGNEADEKQRQRNAELFKEHEQISAQLRELYAQRDAADAGEKMPE 1458
Query: 515 KKYKAL------------------------------------KRATEREISQSADVICCT 538
K+ K L KRA + + Q A VIC T
Sbjct: 1459 KERKTLDDSIVHVRRRKAELGARIDNVKDSERNAGREQELNRKRAQQAVLDQ-AHVICAT 1517
Query: 539 CVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
G+G N F V+IDE+ Q E LIPL G + ++VGD QL P + K+
Sbjct: 1518 LSGSGHDMFQSLNIEFETVVIDEAAQCVEMSSLIPLKYGCIKCIMVGDPKQLPPTVFSKE 1577
Query: 597 AARAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
AA+ QSLF R+ + L QYRMHP +S FPS SFY+G L++G ++ + ++
Sbjct: 1578 AAKFQYEQSLFVRMQNNFPDEVHLLDTQYRMHPDISLFPSRSFYDGLLKDGPSMAKLRAQ 1637
Query: 656 GIDFPW--PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV----VP 709
PW P F+ GQ E + G S +NR E A + +++ LR+
Sbjct: 1638 ----PWHKSALLAPYRFFDVAGQHESAPKGHSLVNRAEIA-IAELLYDRLRADFPDYDFT 1692
Query: 710 SQIGVITPYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE 768
S+IG+ITPY+ Q + N + S+ G QQ++ IE + D+FQGRE + II SCVR++
Sbjct: 1693 SKIGIITPYKSQLRELKNRFASKYG---QQIFDFIEFNTTDAFQGRESEIIIFSCVRASP 1749
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN- 827
GIGFL D RR+NV LTRA+ + +LGN + L + W L+ +E +CL G +
Sbjct: 1750 AGGIGFLQDIRRMNVGLTRAKSSLWVLGNSESLMRGQYWKRLVEDARERDCLTSGDVKRM 1809
Query: 828 LKQSMVQF 835
L Q QF
Sbjct: 1810 LHQPSSQF 1817
>gi|357044126|ref|ZP_09105810.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
gi|355367676|gb|EHG15104.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
Length = 632
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 237/450 (52%), Gaps = 36/450 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F LP LN +Q AV VL + ++++ GPPGTGKT T + + A + QV+VCA
Sbjct: 183 FAPIRLPWLNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAI-NEALMRESQVMVCA 241
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSELHK-L 499
SN+AVD + EK+ G+ V+R+ +R V+ + T + H D + + K +
Sbjct: 242 QSNMAVDWICEKLVDRGINVLRIGNPTR--VNDKMLGFTYERKFEAHPDYPQLWSIRKAI 299
Query: 500 QQLKDEQGELSSSDEKKYKALK-RATEREIS------QSADVICCTCVGAGDPRLANFRF 552
++L++ + S S +K LK RATE EI A V+ T VGA + +F
Sbjct: 300 RELRNNRKRGSESYHQKMDRLKSRATELEIRINTELFDEARVVASTLVGANSRVMEGQKF 359
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 612
+ IDE+ QA E C I + A +V+ GDHCQL P + A R GL ++L ER+V
Sbjct: 360 TTLFIDEAAQALEAACWIA-IRRASRVIFAGDHCQLPPTVKSIAALRGGLGKTLMERIV- 417
Query: 613 LGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--WPVPNRP 667
KP L+VQYRM+ + F S+ FY G + + I R D P W +
Sbjct: 418 -ENKPEVVTLLKVQYRMNEEIMRFSSDWFYHGQIVSAPQIKYRGILDYDNPMVWIDTSD- 475
Query: 668 MFFYVQMGQEEISASGTSYLNRTEAA-NVEKIVTTFLRSG---VVPSQI--GVITPYEGQ 721
++ +E+ +N+ EA ++ + F++ G ++ +I GVI+PY Q
Sbjct: 476 -----ELSKEQFVGESFGRINKGEAELTLKTLQEYFMKIGKQRILDERIDVGVISPYRAQ 530
Query: 722 RAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
Y+ + + + + Y+ I V +VD FQG+E+D I++S VRSNE IGFLND RR
Sbjct: 531 VQYLRSLIKKREFFKP--YRSLISVNTVDGFQGQERDVILISLVRSNEEGQIGFLNDLRR 588
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGL 810
+NVA+TRAR ++ILGN L++ P + L
Sbjct: 589 MNVAITRARMKLIILGNVATLTRHPFYKKL 618
>gi|226481519|emb|CAX73657.1| Egg protein CP82 [Schistosoma japonicum]
Length = 512
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/141 (68%), Positives = 119/141 (84%)
Query: 702 FLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
L+ GV P+ IGVITPYEGQRAY+ +Y+ +G+L +LY+EIE+ASVD+FQGREKDYIIL
Sbjct: 1 MLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGSLNAKLYQEIEIASVDAFQGREKDYIIL 60
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLV 821
SCVR+NE+QGIGFLNDPRRLNVALTRARYG++++GNPK L KQPLWN LL Y++ LV
Sbjct: 61 SCVRANENQGIGFLNDPRRLNVALTRARYGLIVVGNPKALCKQPLWNQLLHFYRDQHLLV 120
Query: 822 EGPLNNLKQSMVQFQKPKKIY 842
EGPLNNL + M+QF +PK Y
Sbjct: 121 EGPLNNLSEYMLQFPRPKIPY 141
>gi|302800219|ref|XP_002981867.1| hypothetical protein SELMODRAFT_179218 [Selaginella moellendorffii]
gi|300150309|gb|EFJ16960.1| hypothetical protein SELMODRAFT_179218 [Selaginella moellendorffii]
Length = 643
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 225/457 (49%), Gaps = 46/457 (10%)
Query: 390 ELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
EL+ SQV AVK L + + L+ GPPGTGKT I+ K+G +VL CA SN+AVD
Sbjct: 194 ELDESQVKAVKMALSAQDVMLLHGPPGTGKTTAVVEIILQEVKRGL-KVLACASSNIAVD 252
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGE 508
+ E+++ +KVVRL +R + V L QV D S + KD + E
Sbjct: 253 NMVERLACHKVKVVRLGHPAR--LLPQVLDCALDAQVLKTDNSSLA--------KDIRKE 302
Query: 509 LSSSDEKKYKALKRATEREIS----------------------QSADVICCTCVGAGDPR 546
+S + K KA R + E+ Q A V+ T GA +
Sbjct: 303 ISVLNAKILKAKDRKSRDELRRELRQLSKEERQRQQKAVTDVIQGASVVLTTLTGAMSAQ 362
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
L F V++DE+ QA E C I ++ G ++ +L GDH QL P ++ K+A + G +L
Sbjct: 363 LQKVDFDVVVLDEAAQALETACWIAILKG-RRCLLAGDHLQLAPTVLSKEAEKQGFGTTL 421
Query: 607 FERLVLL--GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID--FPWP 662
FERL L L VQYRMH + ++ S+ Y G +Q + R+ +D P
Sbjct: 422 FERLAGLYASQAMTMLTVQYRMHEHIMDWSSHELYGGKIQAHELVASRKLFELDGVKKTP 481
Query: 663 VPNRPMFFYVQMG--QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEG 720
+ G EE S N EA + SGV IG++TPY
Sbjct: 482 ATEHTLVLIDICGCDMEESKDETESSFNEGEARIAITHAQKLVESGVKAIDIGIVTPYAA 541
Query: 721 QRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
Q VN + R Q+L E+E++++D FQGREK+ +I+S VRSN+ + +GFL+D RR
Sbjct: 542 Q----VNVLRRMRNEEQRLL-EVEISTIDGFQGREKEAMIISMVRSNDKKEVGFLSDKRR 596
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+NVA+TRA+ ++ + + K P LL ++++H
Sbjct: 597 MNVAVTRAKRQCCVICDSDTVGKDPFLKRLLDYFEKH 633
>gi|341582257|ref|YP_004762749.1| DNA helicase [Thermococcus sp. 4557]
gi|340809915|gb|AEK73072.1| DNA helicase, putative [Thermococcus sp. 4557]
Length = 710
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 240/497 (48%), Gaps = 80/497 (16%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LNASQ AV L P LI GP GTGKT T A ++ ++G +VL A SNVAVD
Sbjct: 173 LNASQRRAVAKALGSPDFFLIHGPFGTGKTRTLAELIRQEVERGN-RVLATAESNVAVDN 231
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKSELHKLQQLKDEQGE 508
L E++ +GLKVVR+ SR VS + TL Y + RH E EL + Q E+ +
Sbjct: 232 LVERLVDSGLKVVRVGHPSR--VSRSLHETTLAYLITRHELYGELRELRVIGQNLAEKRD 289
Query: 509 LSSSDEKKYK-----------------------------------------------ALK 521
+ KY+ L+
Sbjct: 290 TFTKPSPKYRRGLSDKEILRLASKGIGTRGVPARLIREMAEWIKINRQVQKTFDDARKLE 349
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
REI + ADV+ T AG + + +IDE+TQAT P LIP + AK+ VL
Sbjct: 350 ERIAREIIREADVVLTTNSSAGLDVVDYGSYDVAIIDEATQATIPSVLIP-INRAKRFVL 408
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNSFYE 640
GDH QL P I+ +KA G +LFE L+ K L VQYRM+ L EFPS FY
Sbjct: 409 AGDHKQLPPTILSEKAKELG--NTLFEGLIERYPGKSEMLTVQYRMNERLMEFPSREFYG 466
Query: 641 GTLQ-----NGVTINER--QSSGIDFPWPVPNRP---MFFYVQMGQE---EISASGT-SY 686
G ++ +T+ + +S D W RP + F G+E E G+ S
Sbjct: 467 GRIEADESIRAITLADLGVKSPACDGLWNEVLRPENVLVFVDTSGREDRFERQRYGSESR 526
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EA V+++V L G+ P IGVITPY+ QR I R L +E+EV
Sbjct: 527 ENPLEARLVKEVVEKLLELGLNPEWIGVITPYDDQRDLI----------RSLLPEEVEVK 576
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD +QGREK+ I+LS VRSN +GFL D RRLNV+LTRA+ ++++G+ LS P
Sbjct: 577 TVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSVHPT 636
Query: 807 WNGLLTHYKEHECLVEG 823
+ L+ E E +V+
Sbjct: 637 YKRLVEFVSERETVVDA 653
>gi|378730540|gb|EHY56999.1| senataxin [Exophiala dermatitidis NIH/UT8656]
Length = 2264
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 170/534 (31%), Positives = 254/534 (47%), Gaps = 112/534 (20%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM------------------- 429
E+N +Q AVKS L +LIQGPPG+GKT T A+V M
Sbjct: 1298 EVNKAQAKAVKSALDNDAFTLIQGPPGSGKTKTICALVGAMMTGFIKNSDGKGVRLNAAT 1357
Query: 430 -----AKQGQGQVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSP 475
A + ++LVCAPSN AVD+L ++ L VVRL +A+++
Sbjct: 1358 GRPSPAPRASKKILVCAPSNAAVDELVMRLKLGVTTLDGQFEKLSVVRLG--RTDAINAG 1415
Query: 476 VEHLTLHYQV---------------------RHLDTSEKSELHKLQ-QLKDEQGE---LS 510
V+ +TL V H SE EL+ L+ ++ +++G+ +
Sbjct: 1416 VKDVTLEELVNAKLNVAAPKDPREDIHSVMMEHKAVSE--ELNALRDRITEQRGKGIPVP 1473
Query: 511 SSDEKKYKALKRA----------------------------TEREISQSADVICCTCVGA 542
++DE+ ALKR ++EI SA V+C T G+
Sbjct: 1474 TADEQLMDALKRKKNGLGSKIDEMRERQNTASRDMELSRKRIQQEILDSAHVLCATLSGS 1533
Query: 543 GDP--RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G + N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ ++AA+
Sbjct: 1534 GHEIFQSLNVEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSREAAKF 1593
Query: 601 GLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
QSLF R+ K + L QYRMHP++S FPS +FY+ L++G + + +
Sbjct: 1594 QYEQSLFARMENNHKKDVHLLDTQYRMHPAISLFPSKTFYDSRLKDGADMAKLRRR---- 1649
Query: 660 PWPVPN--RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS-----QI 712
PW + P F+ G + + G S +N E ++ ++ VP +I
Sbjct: 1650 PWHQSDLFAPYRFFDVQGMSQAAPKGHSLVNIAELNVAMQLYDRLVKD--VPKYDFAGKI 1707
Query: 713 GVITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
GVITPY+GQ + + + R G Q + +IE + D+FQGRE + II SCVR++ H G
Sbjct: 1708 GVITPYKGQLKELKLRFTQRYG---QDITSKIEFNTTDAFQGRESEIIIFSCVRASTH-G 1763
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPL 825
IGFLND RR+NV LTRA+ + +LGN + L + W L+ K G +
Sbjct: 1764 IGFLNDIRRMNVGLTRAKSSLWVLGNSQSLMQGEYWRALVNDAKARNVYTHGDI 1817
>gi|449451781|ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
Length = 957
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 240/459 (52%), Gaps = 44/459 (9%)
Query: 390 ELNASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
+ + SQ A+ L +RPI +IQGPPGTGKT ++ +QG+ +VLV AP+N AV
Sbjct: 482 DFDDSQKSAISRALNKKRPILIIQGPPGTGKTGLLKELIALAVQQGE-RVLVTAPTNAAV 540
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTS-------EKSELHK-- 498
D + EK+S G+ +VR+ +R +SS V +L V +S +K++L K
Sbjct: 541 DNMVEKLSNIGINIVRVGNPAR--ISSSVASKSLAEIVNSELSSFRTDIERKKADLRKDL 598
Query: 499 LQQLKDEQGELSSSDEKKYKALKRATEREIS-------QSADVICCTCVGAGDPRLANF- 550
Q LKD+ L++ + K L ++ +++ +A V+ T GA DP +
Sbjct: 599 RQCLKDD--SLAAGIRQLLKQLGKSLKKKEKETVKEVLSNAQVVLATNTGAADPLIRKLE 656
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
+F V+IDE+ QA EP C IP++ G ++ +L GD CQL PVI+ +KA GL SL ER
Sbjct: 657 KFDLVVIDEAGQAIEPACWIPILQG-RRCILAGDQCQLAPVILSRKALEGGLGVSLLERA 715
Query: 611 VLL--GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP--VPNR 666
L G L +QYRM+ +++ + S Y+G L++ T++ F P +
Sbjct: 716 ATLHEGALTTMLTIQYRMNDAIASWASKEMYDGILESSPTVSSHLLVNSPFVKPTWITQC 775
Query: 667 PMFFY--------VQMGQEE-ISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
P+ + +G EE + +GT S N EA V + V + + SGV P I V +
Sbjct: 776 PLLLLDTRMPYGSLSVGCEEHLDPAGTGSLYNEGEADIVVQHVCSLIYSGVSPRAIAVQS 835
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PY Q + N + IEVA++DSFQGRE D +I+S VRSN +GFL
Sbjct: 836 PYVAQVQLLRNRLDEIPE-----SAGIEVATIDSFQGREADAVIISMVRSNNLGAVGFLG 890
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
D RR+NVA+TRAR + ++ + + + LL H +
Sbjct: 891 DSRRMNVAITRARKHVALVCDSSTICQNTFLARLLRHIR 929
>gi|115386780|ref|XP_001209931.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190929|gb|EAU32629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 2086
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 259/540 (47%), Gaps = 112/540 (20%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------- 435
++N +Q A+KS L +LIQGPPG+GKT T A+V + G
Sbjct: 1293 KVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNNGVAISRPTTMS 1352
Query: 436 ------------QVLVCAPSNVAVDQLAEKIS---------ATGLKVVRLCAKSREAVSS 474
++LVCAPSN AVD+L + L V+RL +A+++
Sbjct: 1353 NARPQARTTTSKKLLVCAPSNAAVDELVMRFKNGVKTIQGREEKLSVIRLGRS--DAINT 1410
Query: 475 PVEHLTLHYQV--RHLDTSEKSELHK-LQQLKDE--------------------QG---- 507
V +TL V R TS K + LQQ+ E QG
Sbjct: 1411 NVLDVTLDELVNARMSQTSRKETGERDLQQIYTEHKAADTAFKETRARIDQCRAQGLPVP 1470
Query: 508 -------------------ELSSSDEKKYKALK------RATEREISQSADVICCTCVGA 542
E+ ++ +K + A + R ++EI A VIC T G+
Sbjct: 1471 AELEREFDLLKKKKTQLSQEIDNARDKNHSAARDADLNRRRIQQEIIDGAHVICATLSGS 1530
Query: 543 GDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1531 GHEMFQNLSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKF 1590
Query: 601 GLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
QSLF R+ + + L +QYRMHP +S FPS++FY+G LQ+G + ++
Sbjct: 1591 QYEQSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSTFYDGKLQDGPDMARLRTR---- 1646
Query: 660 PWPV-----PNRPMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQ 711
PW P R FF VQ G + +A G S +N E A + + ++T R +
Sbjct: 1647 PWHQGELLGPYR--FFDVQ-GLHQSAAKGHSLINMAELRVAMQLYERLSTDFRGIDFAGK 1703
Query: 712 IGVITPYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
IG+ITPY+GQ + N + +R G +++ +I+ + D+FQGRE + II SCVR++ ++
Sbjct: 1704 IGIITPYKGQLREMKNQFAARYG---NEIFSKIDFNTTDAFQGRESEVIIFSCVRAS-NK 1759
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
GIGFL+D RR+NV LTRA+ + +LGN + L + WNGL+ + EG + + Q
Sbjct: 1760 GIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLIKDARRRNVYTEGDILKILQ 1819
>gi|145494398|ref|XP_001433193.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400310|emb|CAK65796.1| unnamed protein product [Paramecium tetraurelia]
Length = 1493
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 253/530 (47%), Gaps = 107/530 (20%)
Query: 392 NASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAI---VYHMAKQG----QGQVLVCAP 442
N +Q ++K ++ ++ I L+QGPPGTGKT T + VY K + ++L+CAP
Sbjct: 821 NETQANSIKEIILKEKGICLLQGPPGTGKTHTLIGLLSGVYEYMKLTNKFPRKKILICAP 880
Query: 443 SNVAVDQLAEKISATG-----------LKVVRLCAKSREAVSSPV------EHLTLHY-- 483
SN A+D++ +I G ++R+ E V S + E L H
Sbjct: 881 SNAAIDEIILRILQKGGLFDSQGNSRQANLIRIGLLDEENVHSDIIKKVSLEDLAQHKLF 940
Query: 484 ----------------------QVR-HLDTSEK-------------------SELHKLQQ 501
Q++ H+ EK ++ L++
Sbjct: 941 STQKFNAQQDQKTTADLRIELCQIQNHIKKLEKKLNQHGIPGEERRIIKEQINQFSDLRK 1000
Query: 502 LKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDE 559
K E + + ++K YK ++ A++IC T +G +L+ + + +++DE
Sbjct: 1001 SKQEYLDKTRENKKMYKEYYNQFCEKLLNDAEIICSTLSSSGSDKLSKYLDQIELLIVDE 1060
Query: 560 STQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR 619
+ Q TEP +IPL LG ++++L+GD QL + + +SLFER++ +P
Sbjct: 1061 AAQCTEPSNIIPLRLGIQKMILIGDPKQLPATTFSPVSNQTLYNRSLFERILDNNFQPYF 1120
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV-PNRPMFFYVQMGQEE 678
L +QYRMH + FPS FY+ L++ + N R D P NR +F + GQE+
Sbjct: 1121 LDIQYRMHSEIRMFPSEYFYQNKLKDHESTNNR-----DLPTNFFKNRVLFLDILDGQEQ 1175
Query: 679 ISASGTSYLNRTEAANVEKIVTTFLR--SGVVPSQ-IGVITPYEGQRAYIVNYMSRNGAL 735
GTS +N EA+ I+ ++ P+Q IGVI Y+ Q YI L
Sbjct: 1176 --KDGTSNINEQEAS----IIVNSIKCIKEEFPTQTIGVICAYKSQVRYI-------KTL 1222
Query: 736 RQQLYKE--------IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTR 787
+Q Y + I + +VDSFQG+EKD I+ SCVRS++ GIGFLND RR+NVALTR
Sbjct: 1223 LKQKYSDESLFDHSTISINTVDSFQGQEKDIILFSCVRSSQTGGIGFLNDGRRMNVALTR 1282
Query: 788 ARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
A+ + ILGN LSK LW +L + ++ G NL+ QFQ+
Sbjct: 1283 AKNALFILGNAITLSKSDLWKSMLKNIQKR-----GLYRNLESQQFQFQQ 1327
>gi|108758058|ref|YP_634107.1| DNA helicase [Myxococcus xanthus DK 1622]
gi|108461938|gb|ABF87123.1| putative DNA helicase [Myxococcus xanthus DK 1622]
Length = 639
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 250/517 (48%), Gaps = 45/517 (8%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
+D V ++DR++ ++ + + +LG+E R PR F P
Sbjct: 125 LRLDVVPNDVTYDRLRAGLQRIKALDKGAERHKREVVLGNEPP----RFDKPREF-EPTR 179
Query: 389 PELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
P Q +++ L+ GPPGTGK+ A + G+ ++L A SN AVD
Sbjct: 180 PLNPEQQDATARALAAEDFFLVHGPPGTGKSTVLAEVAAQAVADGK-RLLCTAASNAAVD 238
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTS-------EKSELHKLQ 500
L + GL+ +R+ +R V++ ++ TL V H D + E L
Sbjct: 239 HLLDLCLDKGLRAIRVGHPAR--VAARLQEHTLDIVVESHPDRAVSRDLFDEAFSLLGYA 296
Query: 501 QLKDEQGE--------LSSSDEKK-----YKALKRATEREISQSADVICCTCVGAGDPRL 547
+ + QG +S+ E K +AL+R + + +ADVIC T L
Sbjct: 297 RRQRNQGRSRERFANARASTTEAKGMLDEARALERKAVKSVLANADVICVTLSSLDSGVL 356
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
+ +F L+DE+TQATEP L+ L A +V+L GD QL P ++ ++AA+AGL SLF
Sbjct: 357 SGQQFDLALLDEATQATEPLALLGF-LRAPRVILAGDPQQLPPTVLSQEAAKAGLGVSLF 415
Query: 608 ERLVL---LGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP 664
ERL+ G+K + L+ QYRM+ + +FPS Y G L+ +I +R + P
Sbjct: 416 ERLLKDHGEGVKRM-LREQYRMNARIMDFPSREMYGGELRAHPSIADRTLDAVLTPGADV 474
Query: 665 NRPMFFYVQMG----QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEG 720
+ P Y+ EE+ + S N EA VE V L +G+ P ++ VITPY
Sbjct: 475 DAPPVLYLDTAGKGFDEEVEPTTRSLFNPGEAGLVEARVRALLAAGLAPRELAVITPYSA 534
Query: 721 QRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
Q + + + L E+EV +VD+FQGREKD II+S RSN +GFL D RR
Sbjct: 535 QAHQLRERI-------EALSPEVEVDTVDAFQGREKDAIIVSLTRSNSEGQLGFLTDLRR 587
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+NVALTRAR + ++G+ LS P + + + H
Sbjct: 588 MNVALTRARRHLFVVGDSATLSGHPFYARFVEGTQTH 624
>gi|86160632|ref|YP_467417.1| superfamily I DNA/RNA helicase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85777143|gb|ABC83980.1| Superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 619
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 246/509 (48%), Gaps = 63/509 (12%)
Query: 338 TSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVF 397
+++R+ G ++ D +G +H +L E + +R AP PE A+
Sbjct: 132 VTWERLSGGLRRLRDDR---AGKRWHAVLAGE-PARFLRAPRGPALDAPLNPEQQAALEL 187
Query: 398 AVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISAT 457
A ++ ++L+ GPPGTGKT ++ A +G+ VL APSN+AVD L E+++A
Sbjct: 188 ADRA---EDLALVHGPPGTGKTTVLVEVIRRAAARGE-TVLAAAPSNLAVDNLVERLAAA 243
Query: 458 GLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKL-QQLKDEQ---------- 506
GL VR+ +R + +EH TL +V E E ++ Q L D+
Sbjct: 244 GLACVRVGHPAR-VLPGLLEH-TLEARV------EAHEAARIAQDLVDQALALRRDARKR 295
Query: 507 ------GELSSSDEKKYKA---------LKRATEREISQSADVICCTCVGAGDPRLANFR 551
G S+S E++ +A L+ E E+ + A V+ T P LA R
Sbjct: 296 RKKRGPGRFSASREQEREARALLAEARRLEARAEAEVLERAQVVLATLTSLDAPALAGRR 355
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F ++DE+TQA EP + L L A + VL GDH QL P ++ A GL SLFERLV
Sbjct: 356 FALAVVDEATQAVEPAAYLAL-LRADRAVLAGDHLQLPPTVLSAAAQAGGLGVSLFERLV 414
Query: 612 LLGLKPIRLQV--QYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMF 669
R+ + Q+RM+ + FPS + Y G L+ R + + P+
Sbjct: 415 EAHGDRARVMLAEQHRMNARIMAFPSEALYGGALRAHPAAAGR---------AIDDAPLE 465
Query: 670 FYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV 726
G +EE S N EA V L +G+ P+ + VI+PY+ Q +
Sbjct: 466 LVDTSGRGFEEETPEGSDSKQNAGEAELAASEVRRLLAAGLAPADVAVISPYDAQVQRLR 525
Query: 727 NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 786
++ +L +EV +VD FQGREK+ +++S VRSNE +GFL D RR+NVALT
Sbjct: 526 QLLA------DELEAGLEVDTVDGFQGREKEAVVVSLVRSNEAGEVGFLADVRRMNVALT 579
Query: 787 RARYGIVILGNPKVLSKQPLWNGLLTHYK 815
RAR +V++G+ +S+ P + L H +
Sbjct: 580 RARAKLVVVGDGSTVSRHPFYRSFLEHAE 608
>gi|299743534|ref|XP_001835836.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
gi|298405699|gb|EAU85901.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
Length = 1960
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/502 (31%), Positives = 238/502 (47%), Gaps = 101/502 (20%)
Query: 409 LIQGPPGTGKTVTSAAIVYHMAKQ--------------GQGQVLVCAPSNVAVDQLAEKI 454
LIQGPPGTGKT T A+V + + ++L+CAPSN A+D++A+++
Sbjct: 1308 LIQGPPGTGKTSTICALVARFMSRRAIPITAPGSKEVPAKPKILICAPSNAAIDEIAQRL 1367
Query: 455 SAT--------GLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE-------------- 492
A L +VR+ A+ ++ S V+ ++L V+ E
Sbjct: 1368 KAKYCDGDPVKKLSIVRMGAQG--SIGSAVKGVSLDSLVQDKIQEETGNQGFPTEELNRQ 1425
Query: 493 ----KSELHKLQQLKDEQ--------------------------------GELSS----- 511
K E+ L+ +DE+ EL+
Sbjct: 1426 ISMLKMEMESLKHARDEKLKEMTNLQNNYARHNALDQETQAMGRKRQALAAELNKLRDKL 1485
Query: 512 -SDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLI 570
SD + +AL+R EI + ADVIC T G+G L + F V+IDE+ QA E LI
Sbjct: 1486 KSDGRSMEALRRKARFEIIRDADVICSTLSGSGHEALLDQTFEMVIIDEAAQAVELSSLI 1545
Query: 571 PLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQYRMHPS 629
PL +K+ ++VGD QL P ++ ++AA QSLF+R K + L +QYRMHP
Sbjct: 1546 PLKYESKRCIMVGDPQQLPPTVISQQAASKKYDQSLFQRFFKKSPKAVHLLSIQYRMHPE 1605
Query: 630 LSEFPSNSFYEGTLQNGVTINERQSSGIDFPW---PVPNRPMFFYVQMGQEEISASGTSY 686
+S FPS +FY +Q+G + E + PW P+ F V EE S
Sbjct: 1606 ISRFPSKAFYNDRIQDGPNMKELTAR----PWHAEPLLGIYKIFNVNGNAEE--GPQNSL 1659
Query: 687 LNRTE---AANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRN--GALRQQLYK 741
NR E A + + ++T R + +IG+++PY Q + + R+ A Q +
Sbjct: 1660 KNRAEVEVATALYRRLSTQFREFGLERKIGIVSPYRAQ----IKELERSFFQAFGQSVLD 1715
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEH-QGIGFLNDPRRLNVALTRARYGIVILGN-PK 799
EI+ +VD FQG+EKD IILSCVR + IGF+ D RRLNVA+TRA+ + ILGN P
Sbjct: 1716 EIDFNTVDGFQGQEKDIIILSCVRGGPGVKSIGFMADVRRLNVAITRAKSALFILGNVPT 1775
Query: 800 VLSKQPLWNGLLTHYKEHECLV 821
+ + +W + +E +V
Sbjct: 1776 LERSESIWKQAIADARERNLIV 1797
>gi|322701388|gb|EFY93138.1| putative SEN1 protein [Metarhizium acridum CQMa 102]
Length = 2082
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 199/659 (30%), Positives = 290/659 (44%), Gaps = 131/659 (19%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQV------------ 437
LN Q AV +LIQGPPGTGKT T A+V + + QV
Sbjct: 1306 LNHGQAVAVLGAQDNDGFTLIQGPPGTGKTKTITAMVGSLLSEQLAQVSNGVPVGAPLRP 1365
Query: 438 ---------------LVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAV 472
LVCAPSN AVD+L ++ +G+K V+RL +A+
Sbjct: 1366 SAGAIPAAQGRPKKLLVCAPSNAAVDELVLRLK-SGIKTSSGKTKPINVLRLGRS--DAI 1422
Query: 473 SSPVEHLTLHYQVR-------------------HLDTSE-KSELHKLQQLKDE------- 505
++ V+ +TL VR H D ++ K EL +++QL DE
Sbjct: 1423 NAAVKDVTLDELVRIRMEGDNTKDKAKAERDKLHGDAAKIKEELAEIRQLLDEARAQDNR 1482
Query: 506 --QGELSSS-DEKKYKAL-----------------------KRATEREISQSADVICCTC 539
Q LS DE K + + +R ++EI SA V+C T
Sbjct: 1483 ITQNTLSRKFDELKRQQMNIGKQIDANKDSGNSLAREMEMRRRQVQQEILNSAHVLCATL 1542
Query: 540 VGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
G+G N F V+IDE+ Q E LIPL G + +LVGD QL P ++ + A
Sbjct: 1543 SGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSA 1602
Query: 598 ARAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
AR G QSLF R+ + + L +QYRMHP +S FPS FYEG LQ+G + + +
Sbjct: 1603 ARFGYDQSLFVRMQQNHPRSVHLLDMQYRMHPEISMFPSKEFYEGQLQDGQDMLQLRQQ- 1661
Query: 657 IDFPW--PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF---LRSGVVPSQ 711
PW P F+ G +E G S +N E +I F + + +
Sbjct: 1662 ---PWHQSALLGPYRFFDVEGVQEKGRKGQSLVNTRELQVAMEIYDRFSKEYKQCDLTGK 1718
Query: 712 IGVITPYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
IG+ITPY+ Q + N + SR G + + IE + D+FQGRE + II SCVR++
Sbjct: 1719 IGIITPYKAQLFELRNRFTSRYG---ENITDIIEFNTTDAFQGRECEIIIFSCVRASSTG 1775
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
GIGF+ D RR+NV LTRA+ + ILG+ + L + W L+ K + +G + + +
Sbjct: 1776 GIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAKARDRYTKGDILGMFR 1835
Query: 831 SMVQ------FQKPKKIY-NDRRLFFGAGPGIVPNDIS------TSNPNADRRGSRAR-- 875
+Q +Q P+K D + + + ++ ++ P A G++ R
Sbjct: 1836 KPLQRASPSTYQAPQKESPEDIEMLDSPAANTITDGVNNIESEPSTPPQALSNGNQTRKT 1895
Query: 876 --GYMPPGPPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYA--IPS--RGAVHGPVG 928
G +P P G P +H + P G P Q A I S RG + G G
Sbjct: 1896 PDGSIPNVVPRGPGLPVIHTSDNQGSEPKKRPLDGSDPGQQAAKRIASTQRGGLMGKFG 1954
>gi|146421053|ref|XP_001486478.1| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 254/510 (49%), Gaps = 101/510 (19%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-YHMAK---------------- 431
++N SQ A+ S R SLIQGPPGTGKT T IV Y++++
Sbjct: 683 KVNESQANAIISTHNRSGFSLIQGPPGTGKTKTILGIVGYNLSQDVPLGLIEVDGQQGKP 742
Query: 432 QGQGQVLVCAPSNVAVDQLA------------EKISATGLKVVRLCAKSREAVSSPVEHL 479
Q ++LVCAPSN AVD+L E+I+ + VVRL +AV+S V L
Sbjct: 743 QTSSKILVCAPSNAAVDELVVRLRDGVFNFKGERITPS---VVRLGRS--DAVNSAVRDL 797
Query: 480 TLHYQV-RHLDTS-------------------EKSELH------------------KLQQ 501
TL V + L T+ E+ L +L++
Sbjct: 798 TLEELVDKQLQTTVQHVARDPEVRAEHTKLVKERDSLRQSLQSTTLLDEEFTQMELRLRE 857
Query: 502 LKDEQGELSSS-DEKKYKAL---------KRATEREISQSADVICCTCVGAGDPRLANF- 550
+ ++ EL+ DE++ A +R + +I ++ +IC T G+ LA+
Sbjct: 858 VNKKRNELAKKLDEQRENAAVAYRSRELERRQLQAKILNTSQIICSTLSGSAHDFLASLG 917
Query: 551 -RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F +V+IDE+ Q E +IPL G + ++VGD QL P ++ + AA +SLF R
Sbjct: 918 ITFEKVIIDEACQCVELSAIIPLRYGCTKCIMVGDPKQLPPTVLSQTAASLNYDKSLFVR 977
Query: 610 LV-LLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNR 666
+ L VQYRMHP +S FPS FY L +G + E+ + PW VP
Sbjct: 978 MQEQFPDSAYLLDVQYRMHPDISRFPSAEFYRSRLHDGAGMLEKNTR----PWHSEVPFS 1033
Query: 667 PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVP-----SQIGVITPYEGQ 721
P F+ +G+ + S S NR EA V ++V + ++P +IGVI+PY+ Q
Sbjct: 1034 PYRFFDIVGKHQQHESSRSLYNRAEAQVVLEMVDHLMY--MLPPKEFRGRIGVISPYKEQ 1091
Query: 722 RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
+ + ++ +Q++ E++ +VD +QG+EK+ II+SCVR++E +GFL+D RR+
Sbjct: 1092 IRTLKDIFAKKYG--RQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRM 1149
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLL 811
NVALTRAR + ILGN K L + +W+ LL
Sbjct: 1150 NVALTRARTTLWILGNQKSLMRNKVWSRLL 1179
>gi|70988781|ref|XP_749245.1| DNA helicase [Aspergillus fumigatus Af293]
gi|66846876|gb|EAL87207.1| DNA helicase, putative [Aspergillus fumigatus Af293]
Length = 730
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 260/540 (48%), Gaps = 107/540 (19%)
Query: 339 SFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPG-----LPELNA 393
+F RM M+ A S + GH +Q +GA G P LN
Sbjct: 196 TFRRMNQTMEKMAKMTDSEYSHFMRVAFGHTAPMQ-------PDYGAIGPLEFVDPTLND 248
Query: 394 SQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAE 452
SQ A++ L R ++LI GPPGTGKT T ++ M K+ + +VLVC PSN++VD + E
Sbjct: 249 SQKEAIRFALAARDVALIHGPPGTGKTHTLIELILQMVKR-KLRVLVCGPSNISVDNIVE 307
Query: 453 KISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+++ G+ VVR+ +R + S +EH +L TSE + + +KD + E+
Sbjct: 308 RLAPNGVPVVRIGHPAR-LLPSVLEH-SLEVLTH---TSEAAAI-----IKDVRKEI--- 354
Query: 513 DEKKYKALKRATERE-------------------------ISQSADVICCTCVGAGDPRL 547
DEK+ K T RE + + ++V+ T GAG +L
Sbjct: 355 DEKQASIRKTRTGRERRAIYDDLKELRREFRERESRCVDNLVRESNVVLATLHGAGGHQL 414
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK------------ 595
N +F V+IDE++QA E +C IPL L A +VVL GDH QL P +
Sbjct: 415 KNQKFDVVVIDEASQALEAQCWIPL-LSASKVVLAGDHLQLPPTVKSSVDKLKNTKKKEK 473
Query: 596 ---KAARAGLAQ---------SLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYE 640
K A A A+ +LF+RL+ L G+K + L QYRMH + +FPS+ YE
Sbjct: 474 SDTKDASANSAEIIGDFSLETTLFDRLLSLHGPGIKRM-LTTQYRMHEKIMQFPSDELYE 532
Query: 641 GTLQNGVTINERQSSGIDFPWPVPN-----RPMFFYVQMGQE------------EISASG 683
L T+ R D P+ V P+ F+ G + + + G
Sbjct: 533 SKLVAAETVKSRLLK--DLPYEVEETDDTREPIVFWDTQGGDFPEKTEDDDVGKKEALLG 590
Query: 684 TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S N EA V K V +++GV P I ITPY GQ + + + LR++ Y +
Sbjct: 591 ESKSNEMEALVVAKHVQNLIQAGVKPEDIACITPYNGQLSLL------SSMLREK-YPGL 643
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
E+ SVD FQGREK+ +++S VRSN +GFL + RRLNVA+TR + + I G+ + +SK
Sbjct: 644 ELGSVDGFQGREKEAVVVSLVRSNSEHEVGFLGEKRRLNVAMTRPKRHLCICGDSETISK 703
>gi|378756061|gb|EHY66086.1| hypothetical protein NERG_00782 [Nematocida sp. 1 ERTm2]
Length = 1370
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 238/462 (51%), Gaps = 74/462 (16%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
+LN SQ AV + L++ I+LIQGPPGTGKT T ++++ + Q +VLVCAPSN AVD
Sbjct: 923 QLNKSQQVAVSTALKKNITLIQGPPGTGKTKTVSSMIAYFLLQN-CRVLVCAPSNAAVDM 981
Query: 450 LAE--------------KISATGLKVVRLCAKSREAV-----------SSP--VEHLTLH 482
L E +IS +G R+C + EAV +SP V+ + +
Sbjct: 982 LVESGSIWKTIPDCKWIRISISG---NRICDEGDEAVVNKGELMENLQNSPSLVQSINVQ 1038
Query: 483 YQVRHLDTSEKSELHKLQQLKDEQGE----LSSSDEKKYKALKRATEREISQS---ADVI 535
+ T K++L + + E +S+ K+ +++ + +E A ++
Sbjct: 1039 TTPNNYSTDPKNKLKTEKTRESEHTSPNVSYTSTANDKFASVREPSRKENKDEINRAQLV 1098
Query: 536 CCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
CT AG F ++IDE+ QATEP LIPL +++LVGD QL P I+ +
Sbjct: 1099 FCTLSMAGSSVFNQSPFDVLIIDEACQATEPSTLIPLRTAPTRIILVGDPMQLPPTIISQ 1158
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
L+ +LFERL + PI L QYRM+ +S+F S FYE L++GV++
Sbjct: 1159 SK---DLSVTLFERLSE-SITPILLDTQYRMNSIISKFASMQFYENRLRDGVSLESE--- 1211
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
P F G EE G NR E + I+ + +G+I
Sbjct: 1212 ----------LPFAFIDASGTEE--TEGKDIFNRKE---INVILQFSSMAAKAYDTVGII 1256
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
+PY+GQ G L++ + K +++++VD FQG+EKD II+S VRS + IGFL
Sbjct: 1257 SPYKGQV----------GQLKK-VIKGMDISTVDGFQGQEKDCIIISTVRS---KKIGFL 1302
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
ND RR+NVALTRARY ++I+G+ +L + P W L+ + +E+
Sbjct: 1303 NDIRRMNVALTRARYTVIIVGSMSLLQQDPTWKSLIKYVQEN 1344
>gi|326471889|gb|EGD95898.1| DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 716
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 236/472 (50%), Gaps = 70/472 (14%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R I+LI GPPGTGKT T ++ + Q + +VLVC PSN++V
Sbjct: 228 PSLNDSQKEAIRFALASREIALIHGPPGTGKTHTLIELIRQLV-QRKKRVLVCGPSNISV 286
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + +VR+ +R E +S E + VR S+++ +
Sbjct: 287 DNIVERLALHKVPLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIR 346
Query: 498 KLQQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
K + ++ + E K+++ + I + V+ T GAG +L N +F V
Sbjct: 347 KTRNGRERRAIYGDLKELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVV 406
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA--------------- 600
LIDE++QA E +C IPL L A +VVL GDH QL P I K ++ +
Sbjct: 407 LIDEASQAREAQCWIPL-LPASRVVLAGDHLQLPPTIKSKSSSNSDQTNSALWDKEDLRF 465
Query: 601 ----------GLAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
L +LF+RL+ L G+K + L QYRMH + +FPS+ YE L +
Sbjct: 466 NELSNTFDMRNLEITLFDRLLSLHGTGIKRM-LTTQYRMHQKIMDFPSDELYESKLISAD 524
Query: 648 TINERQSSGIDFPWPVPN-----RPMFFYVQMGQE---------EISASG---TSYLNRT 690
+ ER D P+ V + P+ FY G + ISA S N
Sbjct: 525 AVRERLLK--DLPYEVEDTDDTREPLVFYDTQGGDFPEKSPDSNGISAKSLLVESKCNDM 582
Query: 691 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 750
EAA V + V + +GV P I VITPY Q A + + ++ + +E+ SVD
Sbjct: 583 EAAVVARHVENLVSAGVRPEDIAVITPYNAQVALLSQLL-------KEKFPTLELGSVDG 635
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 802
FQGREK+ +++S VRSN+ +GFL + RRLNVA+TR R + I G+ + +S
Sbjct: 636 FQGREKEAVVVSLVRSNQDHEVGFLGEKRRLNVAMTRPRRHLCICGDSETVS 687
>gi|448521196|ref|XP_003868449.1| Sen1 helicase [Candida orthopsilosis Co 90-125]
gi|380352789|emb|CCG25545.1| Sen1 helicase [Candida orthopsilosis]
Length = 1946
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 250/514 (48%), Gaps = 105/514 (20%)
Query: 388 LPELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ---------- 436
L ++N SQ A+ Q SLIQGPPGTGKT T IV + G +
Sbjct: 1269 LYDVNMSQAKAIIGSYQSEGFSLIQGPPGTGKTKTILGIVGYSLSHGTNEKVIEMPSKSS 1328
Query: 437 -------VLVCAPSNVAVDQLAEKI-----SATG----LKVVRLCAKSREAVSSPVEHLT 480
+L+CAPSN AVD+L ++ ++ G LKVVRL +A++ V+ LT
Sbjct: 1329 SPPSKAKILICAPSNAAVDELVVRLRNGVKNSKGEHMPLKVVRL--GRSDAINPAVKDLT 1386
Query: 481 LHYQV-RHLDTSE---------KSELHKLQQLKD-------------------------- 504
L V + L T + +SEL+K+ Q +D
Sbjct: 1387 LEELVDKELQTKQVEVVTDPNLRSELNKMTQERDRLRSRLNDETLDPKEKDGVQQKLLEI 1446
Query: 505 ------------EQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR- 551
+Q E SS + + +R + I A+++C T G+ +AN
Sbjct: 1447 NKQRSELTKKLDDQRERSSIAYRNKEIDRRNIQARILSEANILCATLSGSAHDLVANLSV 1506
Query: 552 -FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
F QV+IDE+ Q E +IPL G K+ ++VGD QL P ++ + AA QSLF R+
Sbjct: 1507 TFDQVIIDEACQCLESAAIIPLRYGCKKCIMVGDPNQLPPTVLSQSAASLNYDQSLFVRM 1566
Query: 611 -------VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV 663
V L L QYRMHP +S+FPS FY+ L +G + E+ + PW +
Sbjct: 1567 QQNYPDSVYL------LNTQYRMHPMISKFPSAEFYQSKLIDGPGMKEKNTR----PWHL 1616
Query: 664 --PNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITP 717
P P F+ + + E + S N+ EA V+K++T +S + +IG+I+P
Sbjct: 1617 IDPLSPYRFFDIVSRHEKNELTRSLFNKEEANVCLQLVQKMMTMVPQSDIA-GKIGIISP 1675
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y+ Q I + R A + ++ EI+ +VD FQG+EK+ II+SCVR++ + +GFL+D
Sbjct: 1676 YKEQIRTIKSVFER--AYGRLIFNEIDFNTVDGFQGQEKEIIIMSCVRASANGNVGFLSD 1733
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
RR+NVALTRA + ILGN L + +W LL
Sbjct: 1734 VRRMNVALTRACTTLWILGNKTSLERDAVWKRLL 1767
>gi|405973110|gb|EKC37842.1| hypothetical protein CGI_10017666 [Crassostrea gigas]
Length = 731
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 234/488 (47%), Gaps = 70/488 (14%)
Query: 392 NASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV---------YHMAKQGQGQV-LVCA 441
N +Q A+K L SLIQGPPGTGKT+T A++ Y + +G V L C
Sbjct: 241 NDNQTKAIKKALMSSFSLIQGPPGTGKTLTGVALIKLFCIINQQYFESNKGNKHVVLYCG 300
Query: 442 PSNVAVDQLAEKI--SATGLKVVRLCAKSRE---------------AVSSPVEHL---TL 481
PSN +VD + + + LK++R+ + E A S+P E L +L
Sbjct: 301 PSNKSVDLVTANLKHNCGALKILRMYGGALECKDYPIPGKVFSITRADSTPDESLKDVSL 360
Query: 482 HYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVG 541
H +R +L + + ++ + K+YK RE DVI CT
Sbjct: 361 HQIIRKPGNQYAEKLKDFDRKFQSEEKIEFREVKEYKKFIAKAVREEIPKYDVILCTTSV 420
Query: 542 AGDPRLANFRFR---QVLIDESTQATEPECLIPLVLG-AKQVVLVGDHCQLGPVIMCKKA 597
A RL N R Q+LIDE+ TEPE + +V AKQVVL+GDH QL PV++C++A
Sbjct: 421 ATSSRLLNASGRSIYQLLIDEAGMCTEPESIATIVATQAKQVVLIGDHKQLQPVVLCQEA 480
Query: 598 ARAGLAQSLFERLVLLGLKPIRLQV---QYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
GL +SLFER L L + QYRMHPSL FPS +FYE L VT +
Sbjct: 481 ENLGLQRSLFERYAESDLSDKVLTLLTNQYRMHPSLCRFPSFAFYEKQL---VTKKSPKF 537
Query: 655 SGID--FPWPVPNRPMFFYVQMGQEE----ISASGT--SYLNRTEAANVEKIVTTFLRS- 705
++ W P+ F G+EE IS G S N E VEK+ ++
Sbjct: 538 EVLEPLSIWRDNKNPLIFCHTEGEEEYLANISEEGNVMSKFNTAEIDQVEKVYVCLVKKE 597
Query: 706 GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 765
GV+P I +++ Y Q + I + + ++ V +V QG E DY+I S VR
Sbjct: 598 GVLPENINIMSQYNAQCSKIKDRLKKHHVQH--------VNTVVGSQGGEWDYVIFSLVR 649
Query: 766 SN-------------EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLT 812
S + +GF+ND ++NVALTRAR G+VI+GN +++ ++N LL
Sbjct: 650 SLPEYRIEPNPTDGWRKENLGFINDDHQINVALTRARKGLVIIGNKRLMKCNDIFNKLLE 709
Query: 813 HYKEHECL 820
Y H CL
Sbjct: 710 DYGRHGCL 717
>gi|326477246|gb|EGE01256.1| DNA-binding protein SMUBP-2 [Trichophyton equinum CBS 127.97]
Length = 716
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 235/472 (49%), Gaps = 70/472 (14%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R I+LI GPPGTGKT T ++ + Q + +VLVC PSN++V
Sbjct: 228 PSLNDSQKEAIRFALASREIALIHGPPGTGKTHTLIELIRQLV-QRKKRVLVCGPSNISV 286
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + +VR+ +R E +S E + VR S+++ +
Sbjct: 287 DNIVERLALHKVPLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIR 346
Query: 498 KLQQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
K + ++ + E K+++ + I + V+ T GAG +L N +F V
Sbjct: 347 KTRNGRERRAIYGDLKELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVV 406
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA--------------- 600
LIDE++QA E +C IPL L A +VVL GDH QL P I K ++ +
Sbjct: 407 LIDEASQAREAQCWIPL-LPASRVVLAGDHLQLPPTIKSKSSSNSDQTNSALWDKEDLRF 465
Query: 601 ----------GLAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
L +LF+RL+ L G+K + L QYRMH + +FPS+ YE L
Sbjct: 466 NELSNTFDMRNLEITLFDRLLSLHGTGIKRM-LTTQYRMHQKIMDFPSDELYESKLIAAD 524
Query: 648 TINERQSSGIDFPWPVPN-----RPMFFYVQMGQE---------EISASG---TSYLNRT 690
+ ER D P+ V + P+ FY G + ISA S N
Sbjct: 525 AVRERLLK--DLPYEVEDTDDTREPLVFYDTQGGDFPEKSPDSNGISAKSPLVESKCNDM 582
Query: 691 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 750
EAA V + V + +GV P I VITPY Q A + + ++ + +E+ SVD
Sbjct: 583 EAAVVARHVENLVSAGVRPEDIAVITPYNAQVALLSQLL-------KEKFPTLELGSVDG 635
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 802
FQGREK+ +++S VRSN+ +GFL + RRLNVA+TR R + I G+ + +S
Sbjct: 636 FQGREKEAVVVSLVRSNQDHEVGFLGEKRRLNVAMTRPRRHLCICGDSETVS 687
>gi|356536591|ref|XP_003536820.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 949
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 233/448 (52%), Gaps = 52/448 (11%)
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 463
+RP+ +IQGPPGTGKT ++ +QG+ +VLV AP+N AVD + EK+S GL +VR
Sbjct: 490 KRPVLVIQGPPGTGKTGLLKQLIACAVQQGE-RVLVTAPTNAAVDNMVEKLSNVGLNIVR 548
Query: 464 LCAKSREAVSSPVEHLTLHYQV-------RHLDTSEKSELHKLQQ--LKDEQGELSSSDE 514
+ +R +S V +L V R +KS+L K + L+D+ L+S
Sbjct: 549 VGNPAR--ISKTVGSKSLEEIVNAKLASFREEYERKKSDLRKDLRHCLRDDS--LASGIR 604
Query: 515 KKYKALKRATER-------EISQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQATEP 566
+ K L R+ ++ E+ SA V+ T GA DP + F V+IDE+ QA EP
Sbjct: 605 QLLKQLGRSLKKKEKQTVIEVLSSAQVVVATNTGAADPLVRRLDTFDLVVIDEAGQAIEP 664
Query: 567 ECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQY 624
C IP++ G K+ +L GD CQL PVI+ +KA GL SL ER L G+ RL QY
Sbjct: 665 SCWIPILQG-KRCILAGDQCQLAPVILSRKALEVGLGISLLERAATLHEGILTTRLTTQY 723
Query: 625 RMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN------------RPMFFYV 672
RM+ +++ + S Y G L++ T+ +D P+ P R + +
Sbjct: 724 RMNDAIASWASKEMYGGLLKSSETVFSHLL--VDSPFVKPTWITQCPLLLLDTRMPYGSL 781
Query: 673 QMGQEE-ISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMS 730
+G EE + +GT S N EA V + V + + +GV P+ I V +PY Q + + +
Sbjct: 782 SVGCEEHLDPAGTGSLYNEGEAEIVLQHVFSLIYAGVSPTAIAVQSPYVAQVQLLRDKLD 841
Query: 731 RNGALRQQLYKE---IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTR 787
+ E EVA++DSFQGRE D +ILS VRSN +GFL D RR+NVA+TR
Sbjct: 842 E--------FPEAAGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITR 893
Query: 788 ARYGIVILGNPKVLSKQPLWNGLLTHYK 815
AR + ++ + + LL H +
Sbjct: 894 ARKHLALVCDSSTICHNTFLARLLRHIR 921
>gi|268637806|ref|XP_002649136.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
gi|256012898|gb|EEU04084.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
Length = 2069
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 241/505 (47%), Gaps = 90/505 (17%)
Query: 391 LNASQVFAVKSVLQRP--ISLIQGPPGTGKTVTSAAIVYHMA--------KQGQGQVLVC 440
LN SQ+ A+ S L+ SL+QGPPGTGKT T +++ ++LVC
Sbjct: 1372 LNESQLSAIASTLKNLGGFSLLQGPPGTGKTKTILSLLSVFTTVLTNIEKSHSDPKILVC 1431
Query: 441 APSNVAVDQLAEKISATGL----------KVVRLCAKSR---EAVSSPVEHLTL-HYQVR 486
APSN AVD++A +I GL + R+ +S VE L L Y+ +
Sbjct: 1432 APSNAAVDEIALRIKKDGLIDKNGNKFKPVICRIGNQSHIHPSVQDISVESLILGEYKDK 1491
Query: 487 H--------------------------LDTSEKSELHKLQQ-----LKDEQGELSSSDEK 515
+ +D K +L+Q L++E +L+ + EK
Sbjct: 1492 NSAIANEDQKKENTRLKIIKIKEKQVEIDKQIKDLAERLKQQEDNKLRNEITKLNYTREK 1551
Query: 516 KYKALKRATERE-----------------ISQSADVICCTCVGAGDPRL--ANFRFRQVL 556
LK A + E I + +I T G+G L A F V+
Sbjct: 1552 YNNDLKLAKDEERRFHEQYSNTKRNLYINIIGRSQIILSTLSGSGYDYLFTATKNFDLVI 1611
Query: 557 IDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLK 616
+DE+ QA E LIPL K+ +LVGD QL P + K A + SLF+RL+ G+
Sbjct: 1612 VDEAAQAVELSTLIPLRHDVKKCILVGDPQQLPPTTISKVATKFQYEISLFQRLMNCGMA 1671
Query: 617 PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR--PMFFYVQM 674
P L+ QYRMHP +S+FPS FY G L++G + E + D+ +R P+ FY
Sbjct: 1672 PTVLKTQYRMHPMISKFPSKIFYRGELEDGKNVREYKQ---DYYNDSASRFGPLVFYDLF 1728
Query: 675 GQE-EISASGTSYLNRTEAANVEKIVTTFLRS--GVVPSQIGVITPYEGQRAYIVNYMSR 731
+ E+ +S S N TE + IV + + +IGVITPY+ Q + N
Sbjct: 1729 DKHGEVRSSFFSLRNPTEVKLAKLIVDQLISNYPNTKDLEIGVITPYKSQSVDLFNAFKG 1788
Query: 732 NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 791
Y+ +EV+++D FQG+EKD++I S VR++ IGFL+D RR+NV LTRA+Y
Sbjct: 1789 --------YQNVEVSTIDGFQGKEKDFVIFSSVRAHSGHSIGFLSDIRRMNVGLTRAKYS 1840
Query: 792 IVILGNPKVLSKQPLWNGLLTHYKE 816
+VILGN +LS W L+ ++
Sbjct: 1841 MVILGNSSLLSNNDDWGNLVNDLRQ 1865
>gi|66826987|ref|XP_646848.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|60474984|gb|EAL72920.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2523
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 255/492 (51%), Gaps = 52/492 (10%)
Query: 324 DINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRF 383
DI H V ST+F R A + F +T ++ + L + + M R +P
Sbjct: 1531 DILHFIKVS---NSTTFIRELEAPEIFKNSKTLLNQILQPSLEVYNLMTSM-RMEIPSLL 1586
Query: 384 GAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIV-YHMAKQGQGQVLVCA 441
+ + ELN SQ AV++ L + I+LIQGPPGTGKT T ++ +A + ++LVC
Sbjct: 1587 RSMCIQELNTSQFSAVETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCG 1646
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 501
PS+ +VD++A++ L V + K L VR + KLQ
Sbjct: 1647 PSHASVDEVAKRCLKKSL--VNIDGKPY-----------LPNMVR---------IGKLQN 1684
Query: 502 LKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGD-PRLANFRFRQVLIDES 560
+ + +S D+ A + I ++A +I T +G P +NF+ VL+DES
Sbjct: 1685 ISPDCHRISLFDKTP------AQRKAIIRNATIIFATLSASGSKPIRSNFKANIVLVDES 1738
Query: 561 TQATEPECLIPLVLG-AKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR 619
TQ++EP LIPL +G ++++LVGD QL P I ++A+ GL SLFERL + P+
Sbjct: 1739 TQSSEPASLIPLCIGNIEKLILVGDPLQLPPTIFSSESAKNGLNISLFERLS--KVLPVE 1796
Query: 620 -LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEE 678
L QYRMHP++S FPSN FY+ L +G + + +F + P+ FY + +E
Sbjct: 1797 MLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKE 1856
Query: 679 ISASGTSYLNRTEAANVEKIVTTFLRS--GVVPSQIGVITPYEGQRAYIVN-YMSRNGAL 735
S S N+ E V ++ ++ G+ITPY+ Q++ I + N L
Sbjct: 1857 ESGKR-SLKNKLEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPL 1915
Query: 736 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
IE +++D QG EKD IILSCVRS + IGFL+D RR+NVALTRA++G+ ++
Sbjct: 1916 N------IETSTIDGVQGSEKDIIILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVI 1966
Query: 796 GNPKVLSKQPLW 807
GN K+L K W
Sbjct: 1967 GNSKLLKKDRTW 1978
>gi|255726544|ref|XP_002548198.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
gi|240134122|gb|EER33677.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
Length = 2061
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 255/533 (47%), Gaps = 116/533 (21%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-YHMAKQ---------------- 432
+N SQ A+ + SLIQGPPGTGKT T IV Y ++ Q
Sbjct: 1318 VNESQAKAIMGTYKSDGFSLIQGPPGTGKTKTILGIVGYSLSHQRSSKAIEIPGTGGTTS 1377
Query: 433 --------------GQGQVLVCAPSNVAVDQLAEK-----ISATG----LKVVRLCAKSR 469
+G++L+CAPSN AVD+L + I++ G L VVRL
Sbjct: 1378 TTPTPTPPPSSASANKGKILICAPSNAAVDELVLRLRDGVINSAGEHMPLNVVRLGRS-- 1435
Query: 470 EAVSSPVEHLTLHYQVR-----------HLD----------TSEKSELHK---------- 498
+A++ V LTL V +D T E+ L K
Sbjct: 1436 DAINVAVRDLTLEELVDKKLSEIKGSDVRIDPNITKELTKYTEERKALRKRLTTEALTDE 1495
Query: 499 -LQQLKDEQGELSSS--------DEKKYKAL---------KRATEREISQSADVICCTCV 540
+ +L+DE E+S D+++ +A +R + +I A V+C T
Sbjct: 1496 EINKLEDEIHEVSKKRSQLASKLDQQREQASIAARAKETNRRNIQNQILSEAQVLCSTLS 1555
Query: 541 GAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
G+ +AN F QV+IDE+ Q E +IPL G K+ ++VGD QL P ++ + AA
Sbjct: 1556 GSAHDLVANLAVSFDQVIIDEACQCLELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAA 1615
Query: 599 RAGLAQSLFERLVLLGLKPI-RLQVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQS 654
QSLF R+ + + L VQYRM+P +S+FPS FY+ L++G + +N R
Sbjct: 1616 SYNYEQSLFVRMQKNNPESVYMLDVQYRMNPMISKFPSAEFYDSKLKDGEGMLELNTR-- 1673
Query: 655 SGIDFPW--PVPNRPMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVP 709
PW P P F+ G+ + +A S NR E A + + + +L G
Sbjct: 1674 -----PWHKDDPLTPYRFFDISGKHQKNALTQSLFNRDEARVALELTEKLMQYLPDGEFS 1728
Query: 710 SQIGVITPYEGQRAYIVNYMSRN--GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
++G+I+PY+ Q VN + R + + EI+ +VD FQG+EK+ II+SCVR++
Sbjct: 1729 GKVGIISPYKEQ----VNTIKREFIAKFGRVILNEIDFNTVDGFQGQEKEIIIMSCVRAS 1784
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 820
E +GFL+D RR+NVALTRA+ + ILGN L + +WN LL + +C+
Sbjct: 1785 ESGSVGFLSDFRRMNVALTRAKTTLWILGNEDSLRRDAVWNRLLADATDRKCV 1837
>gi|281202655|gb|EFA76857.1| putative splicing endonuclease [Polysphondylium pallidum PN500]
Length = 1423
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 242/505 (47%), Gaps = 91/505 (18%)
Query: 388 LPELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVY---------HMAKQGQGQV 437
L ELN+SQ+ A+ S++ +L+QGPPGTGKT T A++ + ++
Sbjct: 808 LSELNSSQMEAIYHSLIPHGFTLLQGPPGTGKTKTIMALLSVLLSTPLDSKINSTAPPKI 867
Query: 438 LVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSSPVEHLTLHYQVRH 487
LVCAPSN AVD++A +I + +R+ S A+S V+ ++L Y +
Sbjct: 868 LVCAPSNAAVDEIASRIIDGDMFDKDGNSYVPSAIRIGQPS--AISRKVQQISLEYLLEK 925
Query: 488 LD----TSEKSELHKLQQLKDEQGELSSSDE---KKYKALKR--------ATE------- 525
TS E K+ ++++ E++SS E +K L+R AT+
Sbjct: 926 NSNDPSTSLNFEQSKIISVREKLAEINSSLESVKQKISTLQRSLGTSLGTATDSTRDLTT 985
Query: 526 ---------REISQSAD-------------------------VICCTCVGAGDPRL--AN 549
+EI + D +I T G+G A
Sbjct: 986 LYHEKDRLFKEIQATKDSEKKVSDVLESARKNMAHSLLNKCNIILSTLSGSGHQETFSAI 1045
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
+F V+IDE+ QA EP LIPL + +LVGD QL P I+ + A++ SLF+R
Sbjct: 1046 KKFDVVIIDEAAQAVEPSTLIPLKHNVMKCILVGDPNQLPPTIISRMASQYQYETSLFQR 1105
Query: 610 LVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMF 669
L G+ L+VQYRMHPS+S FPS FY L++G + P P
Sbjct: 1106 LSSCGIPQQVLKVQYRMHPSISRFPSRHFYMNVLEDGPNVKNYTEEFYKDP---RFGPFI 1162
Query: 670 FYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNY 728
FY E S G S N TEA V ++T S + IGVITPY+ Q I
Sbjct: 1163 FYDIYDSNEESGPGHSLKNVTEAKLVALLITNLENSFPNIKKSIGVITPYKQQVHEIKRR 1222
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
+S + ++I+V+SVD FQGREKD II SCVR++ IGFL+D RR+NV LTRA
Sbjct: 1223 IS-------PVNQDIDVSSVDGFQGREKDIIIFSCVRAHRGGTIGFLSDVRRMNVGLTRA 1275
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTH 813
R ++++GN +L P W L+ H
Sbjct: 1276 RSSLIVIGNSNLLKLNPDWEALVMH 1300
>gi|408674036|ref|YP_006873784.1| AAA ATPase [Emticicia oligotrophica DSM 17448]
gi|387855660|gb|AFK03757.1| AAA ATPase [Emticicia oligotrophica DSM 17448]
Length = 634
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 262/525 (49%), Gaps = 54/525 (10%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
+D ++ S++ MQ A+K G + L G + + T +
Sbjct: 122 LGIDLLFDDNSYEEMQSALKYAQEMANKPEGNLVKILTGEK------KPTFRTDLHPISV 175
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ--VLVCAPSNV 445
P+LN SQ A+ ++ ++++ GPPGTGKT T + + KQ + +LV APSN
Sbjct: 176 PKLNDSQNNALNKIISANELAIVHGPPGTGKTTTLVQTIKTIIKQENAKTPILVVAPSNT 235
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTL------HYQVRHLDTSEK------ 493
AVD L+EK+S GL V+R+ +R VS + LTL H +++ T +K
Sbjct: 236 AVDLLSEKLSEEGLNVLRIGNPAR--VSERLMALTLDNKMTDHQLMKNAKTLKKQANEYR 293
Query: 494 SELHKLQQL--KDEQGELSSSDEKKYKALKRATERE------ISQSADVICCTCVGAGDP 545
+ HK ++ K E+ + ++ +K +K E + +I T VGA
Sbjct: 294 NMAHKYKRSFGKAERDQRKLLFDEAHKIMKEVGNIEQYVIDDVVTKTQIITATLVGANHY 353
Query: 546 RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQS 605
+ N F V+IDE+ QA EP C IP +L A++V+ GDHCQL P I +AA+ GL +
Sbjct: 354 TIRNLSFHTVIIDEAGQALEPACWIP-ILKAQKVIFAGDHCQLPPTIKSNEAAKNGLNTT 412
Query: 606 LFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP 664
L E+ V L + + L + QYRM+ + S FY L+ ++ +Q+ +D
Sbjct: 413 LLEKCVALHPEAVTLLEEQYRMNEQIMAHSSKVFYNNQLKAHASV-AKQTLFVD------ 465
Query: 665 NRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLR-------SGVVPSQIGV 714
+P+ F G E++ GTS N EAA + K + F+ + PS I V
Sbjct: 466 EKPLHFIDTAGCSFDEKLE--GTSSTNPDEAAFLVKHLNGFVEELKKKFSTANFPS-IAV 522
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
I+PY+ Q + + + L++ L I V ++DSFQG+E+D + +S RSN IGF
Sbjct: 523 ISPYKQQISILKEQVEHAPELKEVL-NNISVNTIDSFQGQERDIVYISLTRSNAEGAIGF 581
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHEC 819
L+D RR+NVA+TRAR ++++G+ LS + +++ +E E
Sbjct: 582 LSDIRRMNVAMTRARKKLIVIGDSATLSSSNFYEEFISYTQEIEA 626
>gi|111219431|ref|XP_646847.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|90970906|gb|EAL72919.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2314
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 254/484 (52%), Gaps = 53/484 (10%)
Query: 334 VWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNA 393
V ST+F R A + F +T ++ + L + + M R +P + + ELNA
Sbjct: 1339 VSNSTTFIRELEATEEFKNSKTLLNQILQPSLEVYNLMTSM-RMEIPSLLRSICIQELNA 1397
Query: 394 SQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-YHMAKQGQGQVLVCAPSNVAVDQLA 451
SQ A+++ L + I+LIQGPPGTGKT T ++ +A + ++LVC PS+ +VD++A
Sbjct: 1398 SQFNAIETSLSKKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHASVDEVA 1457
Query: 452 EKISATGLKVVRLCAKSREAVS-SPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELS 510
+ R KS V P L VR + KLQ + + +S
Sbjct: 1458 K----------RCLKKSLINVDGKPY----LPNMVR---------IGKLQNISPDCHRIS 1494
Query: 511 SSDEKKYKALKRATEREISQSADVICCT--CVGAGDPRLANFRFRQVLIDESTQATEPEC 568
D+ A +EI ++A+++ T G+G R +NF+ VL+DESTQ++EP
Sbjct: 1495 PYDKTP------AQRKEIIRNANIVFSTLSASGSGSVR-SNFKANIVLVDESTQSSEPAS 1547
Query: 569 LIPLVLG-AKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQYRM 626
LIPL +G ++++LVGD QL P I +A GL SLFERL + P+ L QYRM
Sbjct: 1548 LIPLCIGNIEKLILVGDPLQLPPTIFSSGSAENGLNISLFERLS--KVLPVEMLNTQYRM 1605
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP++S FPSN FY+ L +G + + +F + P+ FY + +E S S
Sbjct: 1606 HPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKR-SL 1664
Query: 687 LNRTEAANVEKIVTTFLRS--GVVPSQIGVITPYEGQRAYIV-NYMSRNGALRQQLYKEI 743
N+ E V ++ ++ G+ITPY+ Q++ I + N L I
Sbjct: 1665 KNKLEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLN------I 1718
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
E +++D QG EKD IILSCVRS + IGFL+D RR+NVALTRA++G+ ++GN K+L K
Sbjct: 1719 ETSTIDGVQGSEKDIIILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVIGNSKLLKK 1775
Query: 804 QPLW 807
W
Sbjct: 1776 DRTW 1779
>gi|66804903|ref|XP_636184.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
gi|60464545|gb|EAL62683.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
Length = 1255
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 228/435 (52%), Gaps = 51/435 (11%)
Query: 390 ELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIV-YHMAKQGQGQVLVCAPSNVAV 447
+LN SQ+ A+KS L + I+LIQGPPGTGKT T ++ +A + ++LVC PS+ +V
Sbjct: 686 KLNESQLNAIKSSLVESGITLIQGPPGTGKTTTINYLLSVLLAIDKKFKILVCGPSHASV 745
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQG 507
D++A++ C K+ ++S ++ K ++ +
Sbjct: 746 DEVAKR-----------CLKN--LLNSDGQNF------------------KPNMVRTGRK 774
Query: 508 ELSSSDEKKYKALKRATEREIS--QSADVICCTCVGAGDPRL-ANFRFRQVLIDESTQAT 564
E S + +K + + R I+ +S ++ T G+G + NF VLIDESTQ++
Sbjct: 775 EKISPECQKISLKNKNSSRRINLIKSTSIVFSTLAGSGSKAIFENFSPDIVLIDESTQSS 834
Query: 565 EPECLIPLVLGA-KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQ-- 621
EP +IPL LG+ K+++LVGD QL P I K A GL SLFERL K I +Q
Sbjct: 835 EPTSIIPLSLGSIKKLILVGDPVQLAPTIFSKDGADCGLKISLFERLA----KSIDVQFL 890
Query: 622 -VQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEIS 680
QYRMHP +S+F S FY GTL++G ++ + F + PM F+ ++I
Sbjct: 891 NTQYRMHPVISKFISEEFYNGTLKDGENVSIDSFNNCKFHFDPSFGPMKFFNLPKSDQI- 949
Query: 681 ASGTSYLNRTEAANVEKIVTTFLRS--GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQ 738
S +N+ E V ++ + G+ITPY+ Q I ++R+ +
Sbjct: 950 VIKKSIMNQDEIDKVFTLIKELIEKYPECKKLSFGIITPYKLQMIQIKEQLNRS----EH 1005
Query: 739 LYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNP 798
Y I V+++D QG EKD II+SCVR E GIGFL+D RR+NVALTRA+ G+ ++G
Sbjct: 1006 RYLNISVSTIDGVQGSEKDIIIMSCVRCTEKYGIGFLSDRRRINVALTRAKLGLYVIGTS 1065
Query: 799 KVLSKQPLWNGLLTH 813
VL K W L +
Sbjct: 1066 WVLEKDNTWGNFLKY 1080
>gi|440634913|gb|ELR04832.1| DNA helicase [Geomyces destructans 20631-21]
Length = 674
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 240/457 (52%), Gaps = 56/457 (12%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A+K L R ++LI GPPGTGKT T ++ + K + +VLVC PSN++VD
Sbjct: 201 LNDSQKDAIKFALASREVALIHGPPGTGKTHTLIELILQLVKL-KLRVLVCGPSNISVDN 259
Query: 450 LAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKL 499
+ E++S L ++RL +R + ++ + + VR S+++ L K
Sbjct: 260 IVERLSPHKLPILRLGHPARLLPSVLNHSLDILTQTSDAAAIVRDVRKEMDSKQASLRKT 319
Query: 500 QQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI 557
+ ++ +G E K+++ ++ + + V+ T GAG +L +F VLI
Sbjct: 320 KSGRERRGIYGELRELRKEFREREKKCVANLVMGSKVVLATLHGAGGFQLRGEQFDVVLI 379
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC-------KKAARAG--LAQSLFE 608
DE++QA E +C +PL L A +VVL GDH QL P I K+ G L +LF+
Sbjct: 380 DEASQALEAQCWVPL-LQADKVVLAGDHLQLPPTIKSLNSKVKSKEVIIKGMTLETTLFD 438
Query: 609 RLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
RL+ + G+K + L QYRMH ++ FPS+ YEG L + R + D P+ V +
Sbjct: 439 RLLAMHGEGIKRM-LTTQYRMHETIMRFPSDELYEGKLIAAEAVKARLLT--DLPYEVQD 495
Query: 666 -----RPMFFYVQMG--------QEEISAS------GTSYLNRTEAANVEKIVTTFLRSG 706
P+ F+ G +E +S G S N EA V+ V +++G
Sbjct: 496 TEDTREPLVFWDTQGGDFPEASEEEGVSKKAGKGLMGESKSNEMEAVLVKLHVKNLVKAG 555
Query: 707 VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS 766
V P I V+TPY Q A + +G L+++ + IE+ SVD FQGREK+ II+S VRS
Sbjct: 556 VKPEDIAVVTPYNAQLALM------SGPLKEE-FPGIELGSVDGFQGREKEAIIVSLVRS 608
Query: 767 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
N +GFL + RRLNVA+TR R + ++G+ + ++K
Sbjct: 609 NGDGEVGFLGEKRRLNVAMTRPRRHLCVIGDAETVAK 645
>gi|340377341|ref|XP_003387188.1| PREDICTED: hypothetical protein LOC100637715 [Amphimedon
queenslandica]
Length = 3261
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 245/514 (47%), Gaps = 80/514 (15%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ------- 436
G PG ELNA Q ++K L+ LIQGPPGTGK+ T A + Y A +
Sbjct: 2748 GEPG-RELNAIQQDSIKRALRNRFQLIQGPPGTGKSETGAHLAYVFAITNEKMSEEVSKK 2806
Query: 437 --VLVCAPSNVAVD-------QLAEKISATGLKVVRLCAKS--REAVSSPVEHLT----- 480
VL C PSN +VD L ++ + L+++R+ +S R+ PV LT
Sbjct: 2807 KSVLYCGPSNKSVDVVHKNLHLLNRRLGSKKLQILRIYGRSHERKDYPDPVFDLTQERTN 2866
Query: 481 ------------------LHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR 522
LH ++R+ + ++LQ+L D+ S ++ K YK L
Sbjct: 2867 RDDDDDDGRVLEMFRDESLHKRIRNNCPEIVATENRLQELLDQGIIPSLAERKNYKKLIT 2926
Query: 523 ATER-EISQSADVICCTCVGAGDPRLANFR--FRQVLIDESTQATEPECLIPLVLGAKQV 579
E+ EI ++ DVI CTC RL + Q +IDES ATEPE + L + V
Sbjct: 2927 DEEKKEIQKNYDVILCTCNETCSQRLLRSKDILAQCIIDESGMATEPETIAASSL-CEHV 2985
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP-----IRLQVQYRMHPSLSEFP 634
VL+GDH QL PV+M A GL SLFE+ K I L++QYRMH + + P
Sbjct: 2986 VLIGDHKQLQPVVMYPPAKECGLGTSLFEKYANQFEKTNDPRLITLELQYRMHSFICQGP 3045
Query: 635 SNSFYEGTLQNGVTINERQ--SSGIDFPWPVPNR-PMFFYVQMGQEEISAS-------GT 684
S+ FY+ L+ + ER+ + ID W + P+ F G E + S
Sbjct: 3046 SSIFYDSKLKADQIVKERRPLTQSIDLFWSRGQQHPVMFLKVYGIERSTDSKYSRKVDSH 3105
Query: 685 SYLNRTEAANVEKIVTTFLRS-GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S N E V K + + + V I V+TPYE Q++ ++N + + L+ + +K +
Sbjct: 3106 SKCNEQEVKTVLKCIKKLVMNYDVKYKSIAVLTPYEAQKSLVLNTIKNDSVLKAK-WKSL 3164
Query: 744 EVASVDSFQGREKDYIILSCVRSNE-----------------HQGIGFLNDPRRLNVALT 786
VA++ QG E D +IL+ VRS E + +GFL + ++NV +T
Sbjct: 3165 RVATIVESQGDEYDIVILTTVRSQEVSQIRYKQYVQPDRVWFAENLGFLTNDHQINVGIT 3224
Query: 787 RARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 820
RARYG++I+GN +L P WN L+ Y+ C+
Sbjct: 3225 RARYGLIIIGNDILLKYDPTWNKLIEIYEREGCI 3258
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 211/522 (40%), Gaps = 103/522 (19%)
Query: 323 VDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 382
V + SV F+ K + FDR+ A+ + + +V + H V + +P
Sbjct: 1069 VKLEPNVSVTFILKYSYFDRLHRALDSLPL---AVLNRLMPSNPCHFSNVVLNNEDIPLP 1125
Query: 383 FGAP-GLPELNASQVFAVKSVL-----QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ-G 435
+ +L SQ A+KS++ + P+ LI G GTGKT A Y + +Q +
Sbjct: 1126 IKCVRDIVKLEYSQRMALKSIMSCEANKAPV-LIVGSFGTGKTQLIARAAYEILQQDRTS 1184
Query: 436 QVLVCAPSNVAVDQL-----AEKISATGL--KVVRLCAKSREAVSSPVEHLTLHYQVRHL 488
+VL+CA + D +E I + KVVRL A S V++
Sbjct: 1185 KVLICAHHQHSADTFMANYFSEMIDSGWYCGKVVRLMANRDYCAPSNC--------VKYY 1236
Query: 489 DTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLA 548
T + + KL Q+ S+S +G P+
Sbjct: 1237 ATIQDWQFKKLNQISIIVTTFSTS------------------------LHMLGVV-PK-- 1269
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAK--QVVLVGDHCQLGP--VIMCKKAARAGLAQ 604
+F F +L+DE Q EPE + PL L Q+V+ GDH Q+GP +++ + A + GL+
Sbjct: 1270 DF-FTHILLDEGAQTREPESIAPLCLADDNTQIVIAGDHKQVGPSLLVLGELAIKNGLSL 1328
Query: 605 SLFERLVLL----------GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
SL ERL +L + L +R H ++ PS FY+ L +
Sbjct: 1329 SLLERLHILYNDERLTDASSVHSATLLTNFRCHHAILSLPSYLFYDSVLITA-------A 1381
Query: 655 SGIDFPWPVPNRPMFFYVQ--MGQEEISASGTSYLNRTEAANVEKIVTTFLRSG------ 706
+ P P+ F +EIS + N E + + ++ ++ S
Sbjct: 1382 EAVTHLHPEAKYPLHFICSDLSVAKEISTND----NEIEVTILLQEISNYVESWPDQWGE 1437
Query: 707 VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS 766
+ S+I V+T Q+ ++ +S + Y +I+V +V QG E + I LS
Sbjct: 1438 MDLSKICVMTVTAHQKIRVIQKLSHH-------YLDIDVRTVFDIQGCEYEAIFLSTAEP 1490
Query: 767 NEHQGIGFLNDPRR-------LNVALTRARYGIVILGNPKVL 801
+G +P + N ALTRA+ +V GNP +L
Sbjct: 1491 TTKEGKS--KNPTKTPCSQYVFNTALTRAKSLVVCAGNPFLL 1530
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 113/271 (41%), Gaps = 39/271 (14%)
Query: 552 FRQVLIDESTQATEPECLIPLVLGAK--QVVLVGDHCQLGP--VIMCKKAARAGLAQSLF 607
F +LIDE Q EPE L PL++ K ++V+ G+H Q+GP +++ K + GL SL
Sbjct: 390 FTHILIDEGAQTCEPEALSPLLMANKNTRIVIAGNHQQVGPQLLVLGKAPQQFGLCVSLL 449
Query: 608 ERLVLLGLKPI---------RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+RL L K I + YR L E PS FY L+ T++
Sbjct: 450 QRL-LEKYKSIGDITKKNTPSWNINYRSQADLLELPSKLFYNSELRACGTVSCH------ 502
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
P P F +I L ++ + +S + ++TP
Sbjct: 503 ---PKAPYPYVFICSSFTNDIPVDAQCALEADRLLQAVQLYSDKFKSWEL-KDTCIMTPN 558
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIE---VASVDSFQGREKDYIILSCVRSNEHQGIGF- 774
Q A ++ + R +K +E V + +G+E + +S V S E G F
Sbjct: 559 LKQ-ANLIKELIRTK------FKNLEGVNVITTYEMKGQEYCMLFMSTVESLEPNGRPFD 611
Query: 775 ----LNDPRRLNVALTRARYGIVILGNPKVL 801
+P N A+TR++ +V +GNP +L
Sbjct: 612 PLKSFCNPALFNRAITRSKSLVVAVGNPLIL 642
>gi|336397671|ref|ZP_08578471.1| AAA ATPase [Prevotella multisaccharivorax DSM 17128]
gi|336067407|gb|EGN56041.1| AAA ATPase [Prevotella multisaccharivorax DSM 17128]
Length = 642
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 253/470 (53%), Gaps = 58/470 (12%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F P LN +Q AV VL+ + ++++ GPPGTGKT T + + + QVLVCA
Sbjct: 185 FAPMSFPWLNETQERAVNEVLRAKDVAVVHGPPGTGKTTTLVEAINETLMR-ESQVLVCA 243
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD + EK+ G+ V+R+ +R V+ + L Y+ R H D S+ + K
Sbjct: 244 QSNMAVDWICEKLVDRGINVLRIGNPTR--VNDKM--LGFTYERRFEAHPDYSQLWAIRK 299
Query: 499 -LQQLKDEQGELSSSDEKKYKALK-RATEREISQSAD------VICCTCVGAGDPRLANF 550
+++L+ + + +K + LK RATE EI +A+ VI T VG+ + L
Sbjct: 300 AIRELRRRKKGRDDNFHQKLERLKSRATELEIRINAELFGEARVIASTLVGSANRLLEGQ 359
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
+F + IDE+ QA E C IP + +V+L GDHCQL P + A + GL ++L ER+
Sbjct: 360 KFGTLFIDEAAQALEAACWIP-IRRVSRVILAGDHCQLPPTVKSIAALKGGLGKTLMERI 418
Query: 611 V--------LLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS-GIDFPW 661
V LLG VQYRM+ + F S+ FY G ++ I +R+S +D
Sbjct: 419 VENKPECVTLLG-------VQYRMNEEIMRFSSDWFYGGRVRTAPEILQRKSILNLD--- 468
Query: 662 PVPNRPMFFY----VQMGQEEISAS----GTSY--LNRTEA----ANVEKIVTTFLRSGV 707
RP+ + ++MG +E S G S+ +N+ EA ++++ T + +
Sbjct: 469 ----RPILWLDTGQIEMGPDEPSNKEQFIGESFGRVNKGEAELTLSSLQAYFTKIGKERI 524
Query: 708 VPSQI--GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 765
+ +I GVI+PY Q Y+ + + R + + I V +VD FQG+E+D I++S VR
Sbjct: 525 LDERIDVGVISPYRAQVQYLRS-LVRKREFFKPYRRLITVNTVDGFQGQERDIILISMVR 583
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+NE+ IGFL+D RR+NVA+TRAR ++ILG+ + L++ P + L + +
Sbjct: 584 ANENGEIGFLHDLRRMNVAITRARMKLIILGDVQTLARHPFYKKLWEYVR 633
>gi|367012806|ref|XP_003680903.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
gi|359748563|emb|CCE91692.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
Length = 2068
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 187/629 (29%), Positives = 289/629 (45%), Gaps = 148/629 (23%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VD+ H FS +S F M T + +++ Y+ L+
Sbjct: 1210 LKNTKGNKVDVTLRIHRKHNFSKFLTLRSEIFAVKVMQMTTVEREYSTLEALEYYDLVEQ 1269
Query: 369 ----------EV---EVQMVRNTLPRRFGAPGLPELNASQVFA-VKSVLQRPISLIQGPP 414
EV EV V++ +LN+SQ A V +V + SLIQGPP
Sbjct: 1270 ILRAAPSQSVEVDSSEVDFVKSNY----------KLNSSQAKAIVNTVSKEGFSLIQGPP 1319
Query: 415 GTGKTVTSAAIV-YHMAKQG-----------------------QGQVLVCAPSNVAVDQL 450
GTGKT T ++ Y ++ + + ++L+CAPSN AVD++
Sbjct: 1320 GTGKTKTILGVIGYFLSTRNTLPSNVIQAPKGSVSLSTEQLLKKQKILICAPSNAAVDEI 1379
Query: 451 AEKISATGL----------KVVRLCAKSREAVSSPVEHLTLHYQVRH------------- 487
++ G+ +VR+ +AV++ + LTL QV
Sbjct: 1380 VLRLK-DGITNRQGGKFQPSIVRVGRS--DAVNAAIRDLTLEEQVDKQVSQKNYEFSNNP 1436
Query: 488 ------------------------------LDTSEKSELH-KLQQL----------KDEQ 506
L T + ++L K+++L +DE
Sbjct: 1437 DLEKKFSSTVAQRRELRAKLDAENGSASSSLSTEDIAKLQIKIRELSKELNELGRQRDEI 1496
Query: 507 GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQAT 564
E +S + + +R + I S++VIC T GA LA+ +F V++DE+ Q T
Sbjct: 1497 REKNSVNYRNRDLDRRNAQARILASSNVICSTLSGAAHDVLASLGVKFDTVIVDEACQCT 1556
Query: 565 EPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQY 624
E +IPL G K+ ++VGD QL P ++ A+ G QSLF R+ P L VQY
Sbjct: 1557 ELSAIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNFGYNQSLFVRME-KNSSPYLLDVQY 1615
Query: 625 RMHPSLSEFPSNSFYEGTLQNG---VTINERQSSGIDFPWPVPNRPM----FFYVQMGQE 677
RMHP++S+FPS FY G L++G +N R PW N P+ FF + G+E
Sbjct: 1616 RMHPAISKFPSAEFYNGRLKDGPDVEILNIR-------PWH-KNAPLTPYRFFDIVTGKE 1667
Query: 678 EISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYI-VNYMSRN 732
+A SY+N R VE +V + R +IGVI+PY+ Q + + S
Sbjct: 1668 SQNAKSMSYVNTEEIRVAIELVENLVNKYERELDFSGKIGVISPYKEQAMTMRRQFRSHF 1727
Query: 733 GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ-GIGFLNDPRRLNVALTRARYG 791
GA + + ++ ++D FQG+EK+ II+SCVR+++ + +GFL D RR+NVALTRA+
Sbjct: 1728 GA---SIAQYVDFNTIDGFQGQEKEIIIISCVRADDSKTSVGFLRDFRRMNVALTRAKTS 1784
Query: 792 IVILGNPKVLSKQPLWNGLLTHYKEHECL 820
+ ILG+ K L K LW L+T + CL
Sbjct: 1785 MWILGHQKSLVKNKLWRNLITDAQGRGCL 1813
>gi|220919450|ref|YP_002494754.1| superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957304|gb|ACL67688.1| superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 622
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 221/439 (50%), Gaps = 54/439 (12%)
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
++L+ GPPGTGKT ++ A +G+ VL APSN+AVD L E+++A GL VR+
Sbjct: 197 LALVHGPPGTGKTTVLVEVIRRAAARGE-SVLAAAPSNLAVDNLVERLAAAGLACVRVGH 255
Query: 467 KSREAVSSPVEHLTLHYQVRHLDTSE------------KSELHKLQQLKDEQGELSSSDE 514
+R + +EH TL +V + + + + K +Q K G S+S E
Sbjct: 256 PAR-VLPGLLEH-TLEARVEAHEAARIAQGLVDQALALRRDARKRRQ-KRGPGRFSASRE 312
Query: 515 KKYKA---------LKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATE 565
++ +A L+ E E+ + A V+ T P LA RF ++DE+TQA E
Sbjct: 313 QEREARALLAEARRLEARAEAEVLERAQVVLATLTSLDAPALAGRRFALAVVDEATQAVE 372
Query: 566 PECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQV--Q 623
P + L L A + VL GDH QL P ++ A GL SLFERLV R+ + Q
Sbjct: 373 PAAYLAL-LRADRAVLAGDHLQLPPTVLSAAAQAGGLGVSLFERLVEAHGDRARVMLAEQ 431
Query: 624 YRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMG---QEEIS 680
+RM+ + FPS + Y G L+ R + + P+ G +EE
Sbjct: 432 HRMNARIMAFPSEALYGGALRAHPAAAGR---------AIDDAPLELVDTSGRGFEEETP 482
Query: 681 ASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLY 740
S N EA V L +G+ P+ + VI+PY+GQ + R LRQ L
Sbjct: 483 EGSDSKQNTGEAELAAAEVRRLLAAGLAPADVAVISPYDGQ-------VQR---LRQLLA 532
Query: 741 KEIE----VASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILG 796
E+E V +VD FQGREK+ +++S VRSNE +GFL D RR+NVALTRAR +V++G
Sbjct: 533 DEVEAGLEVDTVDGFQGREKEAVVVSLVRSNEAGEVGFLADVRRMNVALTRARAKLVVVG 592
Query: 797 NPKVLSKQPLWNGLLTHYK 815
+ +S+ P + L H +
Sbjct: 593 DGSTVSRHPFYRSFLEHAE 611
>gi|344301279|gb|EGW31591.1| hypothetical protein SPAPADRAFT_51586 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1937
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 245/518 (47%), Gaps = 103/518 (19%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-YHMAKQGQ-------------- 434
LN SQ A+ Q SLIQGPPGTGKT T IV Y ++++ +
Sbjct: 1265 LNVSQAKAILGTHQSEGFSLIQGPPGTGKTKTILGIVGYSLSQKDEKILDIPGHTPTTDP 1324
Query: 435 GQVLVCAPSNVAVDQLAEKI---------SATGLKVVRLCAKSREAVSSPVEHLTLH--- 482
++L+CAPSN AVD+L ++ LKVVRL +A+++ V LTL
Sbjct: 1325 AKILICAPSNAAVDELVLRLRDGVKNSSGETMNLKVVRLGRS--DAINASVRDLTLEELV 1382
Query: 483 ---YQVRHLDTS-------------------------------EKSELH----------- 497
Q + +D + E ++L
Sbjct: 1383 DKELQTKAVDVNIDPTIRQQHSKCIEERDALRARLVNESLSEKEMTDLEDRLRTVNKKRS 1442
Query: 498 KLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQV 555
+L + DEQ E +S + + +R + I A VIC T G+ LA+ +F +V
Sbjct: 1443 ELAKRLDEQRERASIAYRTKEIERRNAQARILSQAQVICSTLSGSAHDFLASLSLKFDKV 1502
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL----- 610
++DE+ Q E +IPL G + ++VGD QL P ++ + AA QSLF R+
Sbjct: 1503 IVDEACQCVELSAIIPLRYGCRTCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQKNHP 1562
Query: 611 --VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNR 666
V L L VQYRMHP +S+FPS FY L++G + E+ D PW P
Sbjct: 1563 DSVYL------LDVQYRMHPQISQFPSAEFYNSKLKDGEGMLEKN----DRPWHKDPPLT 1612
Query: 667 PMFFYVQMGQEEISASGTSYLNRTEAANVEKIV---TTFLRSGVVPSQIGVITPYEGQRA 723
P F+ + + E S N EA ++V T L +IG+I+PY+ Q
Sbjct: 1613 PYRFFDIVSKHERDDQSRSLFNVEEARVALELVQKLMTILPQDKFRGRIGIISPYKEQIR 1672
Query: 724 YIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
I N ++ R G + + +I+ +VD FQG+EK+ II+SCVR++ +GFL+D RR+N
Sbjct: 1673 SIKNEFIRRYG---RAIQDDIDFNTVDGFQGQEKEIIIMSCVRASPSGNVGFLSDVRRMN 1729
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 820
VALTRAR + ILGN LS+ +W LL +C+
Sbjct: 1730 VALTRARTTLWILGNKDSLSRNNVWRRLLEDASNRDCI 1767
>gi|111219429|ref|XP_646844.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
gi|90970905|gb|EAL73051.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
Length = 1772
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 249/500 (49%), Gaps = 85/500 (17%)
Query: 334 VWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLL-----GHEVEVQMVRNTLPRRFGAPGL 388
V +F R A+K F SG ++ +L H++ + R +P + +
Sbjct: 1187 VSNCITFIRELNAIKDFRN-----SGILFDQILQPSRKDHDI-LSSKRMAIPSLLRSMCI 1240
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIV-YHMAKQGQGQVLVCAPSNVA 446
ELN SQ ++++ L + I+LIQGPPGTGKT T ++ +A + ++LVC PS+ +
Sbjct: 1241 QELNTSQFNSIETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINPEFKILVCGPSHAS 1300
Query: 447 VDQLAEKISATGL----------KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEL 496
VD++A++ S L +VR+ K E +S +++
Sbjct: 1301 VDEIAKRCSKKKLIGLDGKPYLPNMVRIGKK--ENISPDCHSISIF-------------- 1344
Query: 497 HKLQQLKDEQGELSSSDEKKYKALKRATEREISQS---ADVICCTCVGAGDPRLAN-FRF 552
T+RE S S A ++ T G+G + N FR
Sbjct: 1345 -------------------------NKTQREKSDSIYRASIVFSTLSGSGSETVKNNFRA 1379
Query: 553 RQVLIDESTQATEPECLIPLVLG-AKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
+L+DESTQ+TEP +IPL +G ++++LVGD QL P I ++A GL SLFERL
Sbjct: 1380 DIILVDESTQSTEPSSIIPLCIGNIEKLILVGDPLQLPPTIFSTESAENGLNISLFERLS 1439
Query: 612 LLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFF 670
+ P+ L VQYRMHP++S FPSN FY L +G + + +F + P+ F
Sbjct: 1440 --KVLPVEMLHVQYRMHPTISRFPSNQFYRDRLLDGDNVKSLVYNQHNFHSDIKYGPIRF 1497
Query: 671 YVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS--GVVPSQIGVITPYEGQRAYIVN- 727
Y + +E + S N+ E V ++ ++ G+ITPY+ Q++ I
Sbjct: 1498 YDVIDSKE-ESGKRSLKNKLEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQ 1556
Query: 728 YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTR 787
+ N L IE +++D FQG EKD IILSCVRS + IGFL+D RR+NVALTR
Sbjct: 1557 HKQFNYPLN------IETSTIDGFQGSEKDIIILSCVRS---ERIGFLSDRRRINVALTR 1607
Query: 788 ARYGIVILGNPKVLSKQPLW 807
A++G+ ++GN K+L K W
Sbjct: 1608 AKFGLFVIGNSKLLKKDRTW 1627
>gi|242781508|ref|XP_002479814.1| tRNA-splicing endonuclease, putative [Talaromyces stipitatus ATCC
10500]
gi|218719961|gb|EED19380.1| tRNA-splicing endonuclease, putative [Talaromyces stipitatus ATCC
10500]
Length = 1391
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 167/539 (30%), Positives = 256/539 (47%), Gaps = 111/539 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQG-------------- 435
+N +Q A+KS L +LIQGPPG+GKT T A+V + G
Sbjct: 577 VNQAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGTLGNQHSVAISRPSAPQ 636
Query: 436 ------------QVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSS 474
++LVCAPSN AVD+L + A L V+RL +A+++
Sbjct: 637 TKAHSANATATKKLLVCAPSNAAVDELVMRFKAGIKTLNGQSEKLSVIRLGRS--DAINT 694
Query: 475 PVEHLTLHYQV------------------------RHLDTSEKSELHKLQQ--------- 501
V +TL V + DT+ K KL Q
Sbjct: 695 NVLDVTLDELVNARLNQSVPKPSEDNNPQKIFEDHKSTDTAFKEARSKLDQFRAKGQTPP 754
Query: 502 ---------LKDEQGELSSSDE----------KKYKALKRATEREISQSADVICCTCVGA 542
LK ++ +LS + + +R ++EI A VIC T G+
Sbjct: 755 DDLLREFELLKKKRTQLSQEIDNARDRNNAIARNNDLTRRRIQQEIVDGAHVICATLSGS 814
Query: 543 GDPRLANFR--FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K+A+R
Sbjct: 815 GHEMFQNLSIDFETVIIDEAAQSIELSALIPLKYGCAKCILVGDPKQLPPTVLSKEASRF 874
Query: 601 GLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
QSLF R+ + L +QYRMHP++S FPS +FY+G LQ+G + + ++
Sbjct: 875 QYEQSLFVRMQSNHPNDVHLLDIQYRMHPAISRFPSVTFYDGLLQDGPDMAKLRAR---- 930
Query: 660 PWPVPN--RPMFFYVQMGQEEISASGTSYLNRTEAANV-----EKIVTTFLRSGVVPSQI 712
PW P F+ G + ++ G S +N E NV E+++T F +S +I
Sbjct: 931 PWHNSQLLSPYRFFDVQGLHQSASKGHSLINVAE-LNVAMQLYERLLTDF-KSIDFSGKI 988
Query: 713 GVITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
G+ITPY+GQ R + + ++ G ++ ++E + D+FQGRE + II SCVR++ ++G
Sbjct: 989 GIITPYKGQLREMKIRFAAKYG---NSIFSKVEFNTTDAFQGRESEVIIFSCVRAS-NKG 1044
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
IGFL+D RR+NV LTRA+ + +LGN + L + W L+T ++ +G + + Q
Sbjct: 1045 IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLIQGEFWGKLITDARQRNLYTDGDVLRMLQ 1103
>gi|398398643|ref|XP_003852779.1| hypothetical protein MYCGRDRAFT_41426, partial [Zymoseptoria tritici
IPO323]
gi|339472660|gb|EGP87755.1| hypothetical protein MYCGRDRAFT_41426 [Zymoseptoria tritici IPO323]
Length = 1778
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 190/661 (28%), Positives = 296/661 (44%), Gaps = 124/661 (18%)
Query: 270 KEDNELRLVPGDELRL----RYSGDAAHP-AWQSVGHVIKLTAQEEVALELR-----ASQ 319
KE+ +L+++ GD + R +GD+ P V + + Q +V + ASQ
Sbjct: 1132 KENRDLQIMEGDIILFSKSPRPAGDSTTPNCLARVYRIKREKGQLQVVYQFTPGSSLASQ 1191
Query: 320 GVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEV---QMVR 376
P I HG V + T +R GA+K Y+ L V Q +
Sbjct: 1192 ITPQTIIHGVKVQSI---TPLEREYGALKALQ----------YYDLCNQIVRARPSQRIE 1238
Query: 377 NTLPRRFGAPGLPELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-----YHMA 430
+ + + ++N +Q A+ + L+ SLIQGPPG+GKT T AIV + ++
Sbjct: 1239 YSEKQISNFQDVYDVNRAQSEAINAALENEGFSLIQGPPGSGKTKTIVAIVGGLLTHTLS 1298
Query: 431 KQGQG------------------QVLVCAPSNVAVDQLAEKIS---------ATGLKVVR 463
+G ++LVCAPSN AVD++ ++ + + VVR
Sbjct: 1299 SAYKGATRISMPNGNANADGAVKKLLVCAPSNAAVDEIVMRLKEGVKTKDGRSHDINVVR 1358
Query: 464 LCAKSR-----------EAVSSPV------------------EHLTLHYQVRHLDT---- 490
+ R E V + EH + +Q++ + T
Sbjct: 1359 IGRSERINAMVGDVTMEELVQKKLGGNQMDEQKRKATAELFKEHQQVSHQLQEMYTQRNA 1418
Query: 491 SEKSELHKLQQLKDEQGEL--------SSSDEKKYKALKRATEREISQS---------AD 533
+EK E + ++L D G + S D+ K + L E+E+++ A
Sbjct: 1419 NEKMEESERKKLDDNIGHVRRRKAELGSRIDQTKDRELAAGREQELNRKRAQQAVLDEAH 1478
Query: 534 VICCTCVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
VIC T G+G N F V+IDE+ Q E LIPL G + ++VGD QL P
Sbjct: 1479 VICATLSGSGHDMFQSLNIEFETVIIDEAAQCVEMSSLIPLKYGCVKCIMVGDPKQLPPT 1538
Query: 592 IMCKKAARAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTIN 650
+ K+AAR QSLF R+ + L QYRMHP +S FPS +FY+ L++G +
Sbjct: 1539 VFSKEAARFQYEQSLFVRMQNNFPNEVHLLDTQYRMHPDISAFPSATFYDHKLKDGSNMA 1598
Query: 651 ERQSSGIDFPWPVPN--RPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLR 704
+ W N P FY GQ + G S +N E A ++ T F
Sbjct: 1599 ALRKKS----WHASNLLAPYRFYDVKGQHSAAPKGFSLVNHAEVEVAMALYSRLTTDFGS 1654
Query: 705 SGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCV 764
+ ++IG+ITPY+ Q + S L ++ +++E + D+FQGRE + II SCV
Sbjct: 1655 TYDFSNRIGIITPYKSQLELLRKKFSTAFGL--EILEKVEFNTTDAFQGREAEIIIFSCV 1712
Query: 765 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGP 824
R+++ G+GFL D RR+NV LTRA+ + +LGN + LS+ W L+ + +V+G
Sbjct: 1713 RASDKGGVGFLQDIRRMNVGLTRAKCSLWVLGNSESLSRGQYWRLLIEDVERKGAMVKGD 1772
Query: 825 L 825
L
Sbjct: 1773 L 1773
>gi|183229840|ref|XP_657569.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169803118|gb|EAL52192.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 966
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 191/342 (55%), Gaps = 13/342 (3%)
Query: 498 KLQQLKDEQGELSSSDEKKY-KALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVL 556
K+Q++ D + + +E +Y +I + +C T L +F +
Sbjct: 592 KIQKIFDRVSQRITLEENEYINKFTSTYFDDILSGTECVCSTLTICTRSTLLKQKFFASI 651
Query: 557 IDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL-LGL 615
+DE+ Q+ EPE L ++ ++ VL+GD QL P + +A AG +S+FER + +
Sbjct: 652 VDEAAQSLEPETLAGII-NVRKTVLIGDIQQLQPTCLSTEAREAGFQKSMFERFMANTQI 710
Query: 616 KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMG 675
K L+ QYRMHP++SEF + FY L+NGV+I++R + I +P P+ F G
Sbjct: 711 KRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSIDDRFDNRIINFFPDYTNPIMFINCDG 770
Query: 676 QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 735
E +SGTSY N E ++++V L + + ++IG+I+PY+ Q+ I Y+S
Sbjct: 771 TEHYGSSGTSYNNAGEVQIIQEVVEKLLNNDIEENEIGIISPYQAQQELISQYVST---- 826
Query: 736 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
+I+VA++D FQG EK+YII SCVRSN+ G+GF+ND +RLNVALTRA+ G++I+
Sbjct: 827 ------KIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALTRAKRGLIII 880
Query: 796 GNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
GN L +WN L+ H+ + L E + Q V+ Q+
Sbjct: 881 GNIPTLVTSKVWNMLIHHFYLKKALFELKEHKFVQYNVENQE 922
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 382 RFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV---------YHMAKQ 432
++ P L LN Q A+ + L ISL+ GPPGTGKT + +I ++ +
Sbjct: 356 KYNIPNLSNLNDYQRKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKYRFYNINR 415
Query: 433 GQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
G+ ++LVCA SN AVD + K+ G+ VR+ A
Sbjct: 416 GEKKLLVCASSNNAVDVICSKLIEKGVPTVRVVA 449
>gi|363740551|ref|XP_415453.3| PREDICTED: probable helicase senataxin [Gallus gallus]
Length = 2713
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 191/621 (30%), Positives = 279/621 (44%), Gaps = 129/621 (20%)
Query: 388 LPELNASQVFAVKS----VLQRP----ISLIQGPPGTGKTVTSAAIVYHM---------- 429
+ E N Q A+++ V Q P I LI GPPGTGK+ T ++ +
Sbjct: 1952 MNEYNEDQKRAIETAYAMVKQHPGLAKICLIHGPPGTGKSKTIVGLLSRVLRENTRNEKT 2011
Query: 430 ----AKQGQGQVLVCAPSNVAVDQLAEKI----------------SATGLKVVRLCAKSR 469
AK Q + LVCAPSN A+D+L +KI + +K+VRL A+
Sbjct: 2012 SKKNAKIKQNRFLVCAPSNAAIDELMKKIIIAFKEKCQNRQEPLGNCGDIKLVRLGAE-- 2069
Query: 470 EAVSSPVEHLTLHYQVRH-----------------------LDT-SEKSELHKL-----Q 500
+++S V +L QV H LD S + +H+ Q
Sbjct: 2070 RSINSEVRAFSLDKQVEHRMKRKPTDRDQDIQKKKAALDEKLDMLSRQRAMHRCEKRESQ 2129
Query: 501 QLKDEQGELSSSDEKKYKALK------RATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
L DE G LS ++ LK + + +I +D+ICCT +G L + +RQ
Sbjct: 2130 MLDDEIGRLSKERQQLASQLKEVRGHSQKVQTDIILESDIICCTLSTSGGGLLESAFWRQ 2189
Query: 555 -------VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
V++DE+ Q+ E E LIPL+ ++VLVGD QL P I KA G QSL
Sbjct: 2190 GLDPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLM 2249
Query: 608 ERL-----------VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
RL +L L ++L VQYRMHP + FPS+ Y+ TL+ E + S
Sbjct: 2250 ARLQRHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLKTDKATEENRCSS 2309
Query: 657 IDFPWPVPNRP-MFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF--LRSGVVPSQIG 713
WP +P + F V G EE S+ N E V +I+ T R + +IG
Sbjct: 2310 ---EWPF--QPYLVFDVGDGHEE--RDKDSFSNPQEVKLVLEIIRTIKEKRKDLGLRRIG 2362
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEI---EVASVDSFQGREKDYIILSCVRSNEHQ 770
+ITPY Q+ I + R ++K EV +VD+FQGREKD II++CVR+N +
Sbjct: 2363 IITPYSAQKKKIQEELDR-------VFKNNSPGEVDTVDAFQGREKDCIIVTCVRANSSK 2415
Query: 771 G-IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK 829
G IGFL +RLNV +TRAR+ + ILG K L + WN L+ + +++ + K
Sbjct: 2416 GSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNKLIQDAQRRGAIIKTSDKSYK 2475
Query: 830 QSMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKP 889
+ ++ K K + P +P T+ S +R P P+ +P
Sbjct: 2476 KDALKILKLKPPPQN-------PPCQLPTKAGTTKAPLAEACSSSRKMGEPADPSEASRP 2528
Query: 890 G--------LHPAGFPMPRVP 902
P G MP++P
Sbjct: 2529 REVAAGPSHAAPQGSRMPQLP 2549
>gi|356504807|ref|XP_003521186.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 233/449 (51%), Gaps = 32/449 (7%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ AV K++ + + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 198 LDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 256
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQ------ 500
+ E++ +K+VR+ +R + + S ++ L L + E+ L
Sbjct: 257 IVERLVPHRVKLVRVGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKALNGKLLKT 316
Query: 501 ----QLKDEQGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
KD Q EL S +E+K + L ++ +SADVI T +GA +L + F
Sbjct: 317 KDRNTRKDIQRELRTLSKEERKRQQLAVT---DVLKSADVILTTLIGAFSKKLDSTSFDL 373
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
V+IDE+ QA E C IP++ G++ +L GDH QL P I +A + GL ++LFERL +
Sbjct: 374 VIIDEAAQALEIACWIPILKGSR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMY 432
Query: 615 LKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID-FPWPVPNRPMFFY 671
I L +QYRMH + ++ S Y ++ ++ ++ P
Sbjct: 433 GDEITSMLTIQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTNSTEPTLLL 492
Query: 672 VQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNY 728
+ EE S N EA ++SGV+PS IG+ITPY Q ++
Sbjct: 493 IDTAGCDMEEKKDEEDSTFNEGEAEVTVTHAKRLVQSGVLPSDIGIITPYAAQ--VVLLK 550
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
M +N ++ K++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TR+
Sbjct: 551 MLKN---KEDQLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRS 607
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R ++ + + +S L+ +++EH
Sbjct: 608 RRQCCLVCDTETVSGDGFLKRLIEYFEEH 636
>gi|156061925|ref|XP_001596885.1| hypothetical protein SS1G_03108 [Sclerotinia sclerotiorum 1980]
gi|154700509|gb|EDO00248.1| hypothetical protein SS1G_03108 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 702
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 150/464 (32%), Positives = 233/464 (50%), Gaps = 64/464 (13%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A++ L + I+LI GPPGTGKT T ++ M KQG +VLVC PSN++VD
Sbjct: 224 LNDSQKHAIRFALASKEIALIHGPPGTGKTHTLIELILQMLKQGL-RVLVCGPSNISVDN 282
Query: 450 LAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKL 499
+ E+++ + ++RL +R + ++ E + VR ++++ + K
Sbjct: 283 IVERLAPHKVPILRLGHPARLLPSVVNHSLDVLTQTSEAAAIVQDVRKEMDTKQASIKKT 342
Query: 500 QQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI 557
+ ++ + E K+++ +R + + + V+ T GAG +L + F V+I
Sbjct: 343 KSGRERKAIYGDLKELRKEFRERERKCVNTLVKGSKVVLATLHGAGGYQLRDENFDVVII 402
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG---------------L 602
DE++QA E +C +PL L A +VVL GDH QL P I + L
Sbjct: 403 DEASQALEAQCWVPL-LSAGKVVLAGDHLQLPPTIKSLNSKTKTNPQSTETESIIKGMTL 461
Query: 603 AQSLFERLVLLGLKPIRLQV----QYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+LF+RL L L IR++V QYRMH + FPS+ YE L + R + +
Sbjct: 462 ETTLFDRL--LKLHGIRIKVMLTTQYRMHDKIMRFPSDELYESKLVAAEAVKARLLT--E 517
Query: 659 FPWPVPN-----RPMFFYVQMG--------QEEISAS------GTSYLNRTEAANVEKIV 699
P+ V P+ F+ G +E + G S N EAA V + V
Sbjct: 518 LPYDVEETEDTIEPLIFFDTQGGDFPEKSEEEGVDKKAGKGMLGESKSNEMEAALVRRHV 577
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
+ +G+ P I V+TPY Q A + M +Q++ IE+ SVD FQGREK+ I
Sbjct: 578 QNLVDAGLKPEDIAVVTPYNAQLALMARSM-------KQVFPGIELGSVDGFQGREKEAI 630
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
I+S VRSN +GFL + RRLNVA+TR R + ++G+ + +S+
Sbjct: 631 IVSLVRSNSEYEVGFLGEKRRLNVAMTRPRRSLTVIGDSETVSR 674
>gi|317504722|ref|ZP_07962683.1| DNA helicase [Prevotella salivae DSM 15606]
gi|315664160|gb|EFV03866.1| DNA helicase [Prevotella salivae DSM 15606]
Length = 649
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 238/451 (52%), Gaps = 34/451 (7%)
Query: 383 FGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F + P LN +Q AV VL + ++++ GPPGTGKT T + + + QVLVCA
Sbjct: 199 FESQRFPWLNPTQERAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMK-ESQVLVCA 257
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+A+D ++E++ G+ V+R+ +R V+ + L Y+ R H D + + K
Sbjct: 258 QSNMALDWISEQLVDRGINVLRVGNPTR--VNDKM--LGFTYERRFESHPDYPQLWAIRK 313
Query: 499 -LQQLKDEQGELSSSDEKKYKALK-RATEREIS------QSADVICCTCVGAGDPRLANF 550
+++L+ + +K++ LK RATE EI A V+ T VG+ + L
Sbjct: 314 AIRELRSHRKRGDERFHQKFEHLKARATELEIRINSNLFDEARVVASTLVGSANRVLEGM 373
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
+F + IDE+ QA E C IP+ +VVL GDHCQL P++ A +AGL +SL ER+
Sbjct: 374 KFGTLFIDEAAQALEAACWIPM-RRVTRVVLAGDHCQLPPMVKSIAALKAGLGKSLMERI 432
Query: 611 VLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
V KP L++QYRM+ + +F S+ FY G +++ R +D P+ R
Sbjct: 433 V--EHKPDVVTLLKIQYRMNEKIMKFSSDWFYHGEVESAP--QTRNRGILDLDEPIEWRD 488
Query: 668 MFFYVQMGQEEISASGTSY--LNRTEAA----NVEKIVTTFLRSGVVPSQI--GVITPYE 719
+ G S G S+ +N+ EA +E + ++ I GVI+PY
Sbjct: 489 SKVDDEEGDSGESFVGESFGRINKAEAQLTLDTLEDYFKKIGKQRILDEHIDVGVISPYR 548
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
Q Y+ + + + + + I V +VD FQG+E+D I++S VRSN+ IGFLND R
Sbjct: 549 AQVQYLRRLIRKRESFKPYRHS-ISVNTVDGFQGQERDIILISLVRSNDQGQIGFLNDLR 607
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
R+NVA+TRAR ++ILG+ L + P + L
Sbjct: 608 RMNVAITRARMKLIILGDKATLCRHPFYRKL 638
>gi|159128659|gb|EDP53773.1| DNA helicase, putative [Aspergillus fumigatus A1163]
Length = 730
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 259/541 (47%), Gaps = 107/541 (19%)
Query: 338 TSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPG-----LPELN 392
+F RM M+ A S + GH +Q +GA G P LN
Sbjct: 195 VTFRRMNQTMEKMAKMTDSEYSHFMRVAFGHTAPMQ-------PDYGAIGPLEFVDPTLN 247
Query: 393 ASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLA 451
SQ A++ L R ++LI GPPGTGKT T ++ M K+ + +VLVC PSN++VD +
Sbjct: 248 DSQKEAIRFALAARDVALIHGPPGTGKTHTLIELILQMVKR-KLRVLVCGPSNISVDNIV 306
Query: 452 EKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSS 511
E+++ G+ VVR+ +R + S +EH +L TSE + + +KD + E+
Sbjct: 307 ERLAPNGVPVVRIGHPAR-LLPSVLEH-SLEVLTH---TSEAAAI-----IKDVRKEI-- 354
Query: 512 SDEKKYKALKRATERE-------------------------ISQSADVICCTCVGAGDPR 546
DEK+ K T RE + + ++V+ T GAG +
Sbjct: 355 -DEKQASIRKTRTGRERRAIYDDLKELRREFRERESRCVDNLVRESNVVLATLHGAGGHQ 413
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK----------- 595
L N +F V+IDE++QA E +C IPL L A +VVL GDH QL P +
Sbjct: 414 LKNQKFDVVVIDEASQALEAQCWIPL-LSASKVVLAGDHLQLPPTVKSSVDKLKNTKKKE 472
Query: 596 ----KAARAGLAQ---------SLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFY 639
K A A A+ +LF+RL+ L G+K + L QYRMH + +FPS+ Y
Sbjct: 473 KSDTKDASANSAEIIGDFSLETTLFDRLLSLHGPGIKRM-LTTQYRMHEKIMQFPSDELY 531
Query: 640 EGTLQNGVTINERQSSGIDFPWPVPN-----RPMFFYVQMGQE------------EISAS 682
E L + R D P+ V P+ F+ G + + +
Sbjct: 532 ESKLVAAEAVKSRLLK--DLPYEVEETDDTREPIVFWDTQGGDFPEKTEDDDVGKKEALL 589
Query: 683 GTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE 742
G S N EA V K V +++GV P I ITPY GQ + + + LR++ Y
Sbjct: 590 GESKSNEMEALVVAKHVQNLIQAGVKPEDIACITPYNGQLSLL------SSMLREK-YPG 642
Query: 743 IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 802
+E+ SVD FQGREK+ +++S VRSN +GFL + RRLNVA+TR + + I G+ + +S
Sbjct: 643 LELGSVDGFQGREKEAVVVSLVRSNSEHEVGFLGEKRRLNVAMTRPKRHLCICGDSETIS 702
Query: 803 K 803
K
Sbjct: 703 K 703
>gi|212526670|ref|XP_002143492.1| tRNA-splicing endonuclease, putative [Talaromyces marneffei ATCC
18224]
gi|210072890|gb|EEA26977.1| tRNA-splicing endonuclease, putative [Talaromyces marneffei ATCC
18224]
Length = 2105
Score = 212 bits (540), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 168/548 (30%), Positives = 258/548 (47%), Gaps = 117/548 (21%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQG-------------- 435
+N +Q A+KS L +LIQGPPG+GKT T A+V + G
Sbjct: 1281 VNQAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSSTLGNQHSVSISRPSTHQ 1340
Query: 436 ------------QVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSS 474
++LVCAPSN AVD+L + A L V+RL +A+++
Sbjct: 1341 APGPKAPTTATKKILVCAPSNAAVDELVMRFKAGVKTLNGRSEKLNVLRLGRS--DAINA 1398
Query: 475 PVEHLTLHYQV------------------------RHLDTSEKSELHKLQQ--------- 501
V +TL V + DT+ K KL Q
Sbjct: 1399 NVLDVTLDELVNARLNQTIQKTSEEKNPQKIFEDHKSTDTAFKETRTKLDQFRAKGQTPP 1458
Query: 502 ---------LKDEQGELSSSDE----------KKYKALKRATEREISQSADVICCTCVGA 542
LK ++ +LS + + +R ++EI A VIC T G+
Sbjct: 1459 DELLREFELLKKKRTQLSQEIDNTRDRNNEIARNNDLTRRRIQQEIVDGAHVICATLSGS 1518
Query: 543 GDPRLANFR--FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K+A+R
Sbjct: 1519 GHEMFQNLNIDFETVIIDEAAQSIELSALIPLKYGCAKCILVGDPKQLPPTVLSKEASRF 1578
Query: 601 GLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
QSLF R+ + L +QYRMHP++S+FPS +FY+G LQ+G + + ++
Sbjct: 1579 QYEQSLFVRMQSNHPNDVHLLDIQYRMHPAISQFPSVTFYDGLLQDGPDMAKLRAR---- 1634
Query: 660 PWPVPN--RPMFFYVQMGQEEISASGTSYLNRTEAANV-----EKIVTTFLRSGVVPSQI 712
PW P F+ G + ++ G S +N E NV E+++ F +S +I
Sbjct: 1635 PWHNSQLLSPYRFFDVQGLHQSASKGHSLINIAE-LNVAMQLYERLLADF-KSYDFSGKI 1692
Query: 713 GVITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
G+ITPY+GQ R + +R G ++ ++E + D+FQGRE + II SCVR++ ++G
Sbjct: 1693 GIITPYKGQLREMRTRFAARYG---NSIFSKVEFNTTDAFQGRESEVIIFSCVRAS-NKG 1748
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQS 831
IGFL+D RR+NV LTRA+ + +LGN + L + W L+T ++ +G +
Sbjct: 1749 IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLIQGEFWKKLITDSRQRNVYTDGDV------ 1802
Query: 832 MVQFQKPK 839
+ Q+P+
Sbjct: 1803 LAMLQRPQ 1810
>gi|294659099|ref|XP_461444.2| DEHA2F25388p [Debaryomyces hansenii CBS767]
gi|202953617|emb|CAG89859.2| DEHA2F25388p [Debaryomyces hansenii CBS767]
Length = 755
Score = 212 bits (540), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 270/584 (46%), Gaps = 110/584 (18%)
Query: 337 STSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL--PELNAS 394
S ++ RM AM + +S I +LLG E Q + + R P LN S
Sbjct: 181 SITYKRMTTAMNKLSELTSSNKSEIIQYLLG---ESQYAKKSSGRSLKQKHFFNPNLNTS 237
Query: 395 QVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEK 453
Q A+ ++ + I++I GPPGTGKT T ++ + +VLVC PSN++VD + E+
Sbjct: 238 QKEAINFAINESAITIIHGPPGTGKTYTLIELIKQLTFNNDEKVLVCGPSNISVDTILER 297
Query: 454 IS---------ATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ--- 501
+S K R KS A +P E + + + R L ++ + L L +
Sbjct: 298 LSPIFNEEEVHTDKKKSRRAVKKSTSAGKNPEELIRIGHPARLLGSNLQHSLDILSKTNY 357
Query: 502 ----------LKDEQGELSS------------------SDEKKYKALKRATEREISQS-- 531
LKD + ++S SD K YK R ER+I Q
Sbjct: 358 DTGSNDNKEILKDIEKDISDTLGKVKKCRNYAERRALWSDLKTYKKELRVRERKIVQDLL 417
Query: 532 --ADVICCTCVGAGDPRLA--------NFR-----FRQVLIDESTQATEPECLIPLV--L 574
A V+ T GAG L NF F ++IDE +Q+ EP+C IPLV L
Sbjct: 418 VGAKVVLSTLHGAGSYELTSLYKEPTLNFDHDHPLFDTIIIDEVSQSLEPQCWIPLVNHL 477
Query: 575 GAKQVVLVGDHCQLGPVIMCK------------KAARAGLAQSLFERLVL----LGLKPI 618
G K++V+ GD+ QL P + K K A L +LF+RL+ K +
Sbjct: 478 GCKRLVIAGDNMQLPPTVKSKDDLDALMRKLNIKDGVADLELTLFDRLIRDHNGSQFKKL 537
Query: 619 RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR----PMFFYVQM 674
L QYRM+ + FPSN Y+G L+ ++ R + D P P P +Y
Sbjct: 538 -LDTQYRMNEDIMRFPSNELYDGNLKAHDSV--RSLTLEDLPSVKPTDDTSIPCVWYDTQ 594
Query: 675 G-----------QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRA 723
G ++ S S N E VE+ + L++G+ P+ IGVI+PY Q +
Sbjct: 595 GGNFPERASDDDSRAMAESTGSKYNDMEVLVVEQHLQNLLQAGITPADIGVISPYNAQAS 654
Query: 724 YIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNV 783
+ L+ + IEV++VD FQGREK+ II+S VRSN ++ IGFL D RRLNV
Sbjct: 655 LL------KKTLQSRQIDGIEVSTVDGFQGREKEAIIISLVRSNPNREIGFLADRRRLNV 708
Query: 784 ALTRARYGIVILGNPKVLS---KQPLWNGLLTHYKEHECLVEGP 824
A+TR + + I+G+ ++++ K+ L N + Y E+E + P
Sbjct: 709 AMTRPKKHLCIIGDLELMATSGKKYLKN--WSQYAENEYEIRYP 750
>gi|425777077|gb|EKV15267.1| tRNA-splicing endonuclease, putative [Penicillium digitatum PHI26]
Length = 2154
Score = 212 bits (540), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 255/537 (47%), Gaps = 95/537 (17%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ------------- 436
+N +Q A+KS + +LIQGPPG+GKT T A+V + G+
Sbjct: 1306 INRAQARAIKSAVDNDAFTLIQGPPGSGKTKTIIALVGSLLSDVLGKQLIKVNGAPVARN 1365
Query: 437 -----VLVCAPSNVAVDQLAEKI-------SATGLKVVRLCAKSREAVSSPVEHLTLHYQ 484
+L+CAPSN AVD+L ++ + KV L +A+++ V +TL
Sbjct: 1366 ALSKKLLLCAPSNAAVDELVMRLKDGVRTTNGRQEKVSVLRLGRSDAINTKVLDVTLDEM 1425
Query: 485 V-----------------------RHLDTSEKSELHKLQQ------------------LK 503
V + DTS K +L + +K
Sbjct: 1426 VNARLNQDPSKGNGVDLQKLYEEHKTTDTSFKELRGQLDEARAKGLPPPEELEREFDLMK 1485
Query: 504 DEQGELSSSDEK----------KYKALKRATEREISQSADVICCTCVGAGDPRL--ANFR 551
++ +LS+S +K KR + +I + VIC T G+G N
Sbjct: 1486 KKRSQLSTSIDKARDQNHTLARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQGMNVE 1545
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F V+IDE+ Q E LIPL G + VLVGD QL P ++ K A++ QSLF R+
Sbjct: 1546 FETVIIDEAAQCIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQ 1605
Query: 612 LLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN--RPM 668
+ + L +QYRMHP++S FPS +FY+G LQ+G + + + PW P
Sbjct: 1606 KNHPQDVHLLDIQYRMHPAISHFPSVTFYDGKLQDGPDMAKLRQR----PWHQSELLSPY 1661
Query: 669 FFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYI 725
F+ G +A G S +N E A + + T ++ +IG+ITPY+GQ +
Sbjct: 1662 RFFDVQGMHSSAARGHSLINYAELQVAMQLYDRLITDVKEYDFAGKIGIITPYKGQLREL 1721
Query: 726 VN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 784
N + R G + + ++++ + D+FQGRE + II SCVR++ ++GIGFL D RR+NV
Sbjct: 1722 KNQFTQRYG---EDILRKVDFNTTDAFQGRESEVIIFSCVRAS-NKGIGFLADIRRMNVG 1777
Query: 785 LTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKI 841
LTRA+ + +LGN + L + WNGL+ + +E EG + + Q QF K+I
Sbjct: 1778 LTRAKSSLWVLGNSQSLEQGQFWNGLIKNARERNVYTEGDIVKILQK-PQFTGYKEI 1833
>gi|83816360|ref|YP_444497.1| DNA helicase [Salinibacter ruber DSM 13855]
gi|83757754|gb|ABC45867.1| putative DNA helicase [Salinibacter ruber DSM 13855]
Length = 707
Score = 212 bits (540), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 232/497 (46%), Gaps = 85/497 (17%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN +Q AV K+V + LI GPPGTGKT T+ ++ +G+ VL A SN AVD
Sbjct: 217 LNDAQRRAVRKAVATDDVHLIHGPPGTGKTTTATEVLQQCVDRGES-VLATAASNTAVDN 275
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLK--DEQG 507
+ ++ G VVRL +R V+ + TL Q+ DT +S+ + + D Q
Sbjct: 276 VVAFLAEQGTDVVRLGHPAR--VNDRLRTHTLDAQIEDTDTHRRSQQKREKAFAVLDRQE 333
Query: 508 ELSS---------SDEK-------------------------------------KYKALK 521
+L++ SD K + +AL+
Sbjct: 334 DLTAPSGRWRRGMSDRKIKERAEQGRGSRGVPPERIEEMAAWLALQERADALFDEAEALE 393
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
+ E+ +ADV+C T AG L F ++IDE+TQAT P C IP+ A++ VL
Sbjct: 394 QEAIDEVLGAADVVCSTNSTAGSDLLDGHTFDTLVIDEATQATAPSCWIPMT-HARRAVL 452
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLV--------LLGLKPIRLQVQYRMHPSLSEF 633
VGDH QL P I ++AAR GL +LFERL G L+ QYRMH ++ F
Sbjct: 453 VGDHKQLPPTIQNQEAARRGLRHTLFERLAHHHETAPEAPGSIRSLLRRQYRMHETIMGF 512
Query: 634 PSNSFYEGTLQNGVTINERQSSGIDFP---WPVPNRPMFFYVQMGQEEISASGT------ 684
P+ +FY+G L+ T R + + P P R + + SG
Sbjct: 513 PNRTFYDGRLEADDTARHRTLADLGVPEHALPADERRAILDPEASLVFVDTSGIDAPEHQ 572
Query: 685 -----SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 739
S N EA + ++ T L +GV PS I VI+PY+ Q I ++ +G
Sbjct: 573 RSGSHSRENPREADLIAQLTTALLEAGVAPSAIAVISPYDDQVDRIDRALAPDGP----- 627
Query: 740 YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 799
E +VD FQGREK+ ++LS V SN+ IGFL++PRR NVA+TRA V++G+
Sbjct: 628 ----ETDTVDGFQGREKEIVLLSLVHSNDRGAIGFLDEPRRFNVAVTRAERKAVVVGDAS 683
Query: 800 VLSKQPLWNGLLTHYKE 816
++ + G Y E
Sbjct: 684 TVAAADVL-GAFVRYAE 699
>gi|315231815|ref|YP_004072251.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
gi|315184843|gb|ADT85028.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
Length = 652
Score = 212 bits (540), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 174/504 (34%), Positives = 244/504 (48%), Gaps = 88/504 (17%)
Query: 386 PGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
P +LN SQ AV L LI GP GTGKT T A ++ K+G+ +VL A SN
Sbjct: 166 PFDKQLNESQRKAVSFALGGEDFFLIHGPFGTGKTRTLAEVILQEVKRGK-KVLATAESN 224
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEK--------SEL 496
VAVD L E++ +K+VRL SR VS ++ TL YQV +T EK S+
Sbjct: 225 VAVDNLVERLWGK-VKLVRLGHPSR--VSKHLKESTLAYQV---ETHEKFRRVKELRSKA 278
Query: 497 HKLQQLKD----------------------EQG------------------ELSSSDEKK 516
+L L+D E+G + +K
Sbjct: 279 ERLAMLRDQCTKPTPQWRRGLTDRQILRLAERGIGARGIPARVVKSMAQWIAFNEKVQKL 338
Query: 517 YKALKRATE---REISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLV 573
Y K+ E RE+ ADV+ T A + + F ++DE++QAT P LIP+
Sbjct: 339 YDEAKKLEEEIIREVISKADVVLSTNSSAALDFIKDINFDVAVVDEASQATIPSVLIPIA 398
Query: 574 LGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSE 632
AK+ +L GDH QL P I+ ++A L+++LFE+L+ L K L++QYRM+ L E
Sbjct: 399 -KAKKFILAGDHKQLPPTILSEEAKE--LSETLFEKLIKLYPSKAKMLEIQYRMNERLME 455
Query: 633 FPSNSFYEGTLQ--NGVTINERQSSGIDF-----PWPV---PNRPMFFYVQMGQ-----E 677
FPS FY G ++ +GV GI PW P P+ F V + E
Sbjct: 456 FPSREFYNGRIKAYDGVKNITLLDLGIRVFHFGEPWDSILNPKEPLVF-VDTSKHPEKWE 514
Query: 678 EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQ 737
S N EA V++IV LR G+ P IGVITPY+ QR I + + +
Sbjct: 515 RQRKGSLSRENPLEAKLVKEIVKRLLRMGIRPESIGVITPYDDQRDLISSLIEND----- 569
Query: 738 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 797
EIEV +VD +QGREK+ IILS VRSN+ +GFL D RRLNV+LTRA+ ++ +G+
Sbjct: 570 ----EIEVKTVDGYQGREKEVIILSFVRSNKKGELGFLTDLRRLNVSLTRAKRKLIAIGD 625
Query: 798 PKVLSKQPLWNGLLTHYKEHECLV 821
+ L P + + K+ +
Sbjct: 626 SETLGAHPTYKRFVEFVKKKGAFI 649
>gi|417303798|ref|ZP_12090840.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica WH47]
gi|327539896|gb|EGF26498.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica WH47]
Length = 735
Score = 212 bits (540), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 238/458 (51%), Gaps = 48/458 (10%)
Query: 390 ELNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
ELN Q AV +++ +++I GPPGTGKT T A I+ ++G+ +VL CA SN AVD
Sbjct: 282 ELNPPQRDAVAFAMMADDVAIIHGPPGTGKTTTIAEIIAQSVERGE-RVLACAASNTAVD 340
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE--KSELHKLQQL---- 502
L E++ V+R+ +R V ++ TL V TS K +L Q+
Sbjct: 341 NLLERLVRLMPNVIRVGHPAR--VFESLQEHTLDALVESDPTSTVIKDLRRELDQILREA 398
Query: 503 -----------KDEQGELSSSDEKKYKALKRATEREISQS----ADVICCTCVGAGDPRL 547
+ ++ EL + + + + + R+ ER I ++ ADVIC T + L
Sbjct: 399 NRPIREGGGRERKQRAELFN-EAGRLRGMIRSQERSIVRAVIDRADVICTTTT-IDEELL 456
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
++ F V++DES Q TEP + +L A +++L GDHCQL P ++ AAR G+ SL
Sbjct: 457 SDQSFDLVVVDESCQCTEP-GMWQAILRADRLILAGDHCQLPPTVLSDDAARIGMRDSLM 515
Query: 608 ERLVLLGLKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
+RLV + I RL VQYRM+ S+ F S+ FY+GTL ++ ++ D P N
Sbjct: 516 QRLVHRYGEKIYRRLTVQYRMNESIMRFSSDHFYDGTLIADASV--KRHLLCDLPNVEEN 573
Query: 666 ----RPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
P+ G +EE+ G S LN EA + ++V GV QI VI PY
Sbjct: 574 DFTSEPLLLIDTAGAGYEEELEPDGQSKLNHGEAKVILQLVKQLADMGVTGDQIAVIAPY 633
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q RN +R L IE+ +VD FQGREK+ ++++ RSN IGFL+D
Sbjct: 634 AAQ--------VRNLRMRLDL-DGIEIDTVDGFQGREKEVVLITMTRSNPDGEIGFLSDQ 684
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
RR NVALTRA+ ++++G+ L ++ L +++++
Sbjct: 685 RRSNVALTRAKRKLIVVGDSATLCNHEFYSELFSYFED 722
>gi|358375281|dbj|GAA91865.1| DNA helicase [Aspergillus kawachii IFO 4308]
Length = 733
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 151/467 (32%), Positives = 233/467 (49%), Gaps = 65/467 (13%)
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R I+LI GPPGTGKT T ++ M ++ Q +VLVC PSN++V
Sbjct: 253 PTLNDSQKEAIRFALAAREIALIHGPPGTGKTHTLIELIVQMVQRKQ-RVLVCGPSNISV 311
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + VVR+ +R E ++ E + VR +++ +
Sbjct: 312 DNIVERLAPKKVPVVRIGHPARLLPSVLDHSLEVLTHTSEAAEIVRDVRKEIDQKQASIR 371
Query: 498 KLQQLKDEQG---ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + +L + + + E + +S+ V+ T GAG +L N +F
Sbjct: 372 KTRSARERRAIYDDLRELRREFRERENKCVENLVRESS-VVLATLHGAGGHQLKNQKFDV 430
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK------------------ 596
V+IDE++QA E +C IPL L A +VVL GDH QL P + K
Sbjct: 431 VIIDEASQALEAQCWIPL-LSASKVVLAGDHLQLPPTVKSTKDDVRKMKAKEEDKKENGE 489
Query: 597 -AARAGLAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
L +LF+RL+ + G+K + L QYRMH + +FPS+ Y+ L T+ R
Sbjct: 490 LLDNVSLETTLFDRLLSMHGPGIKRM-LTTQYRMHEKIMQFPSDELYDSKLMAADTVKAR 548
Query: 653 QSSGIDFPWPVP-----NRPMFFYVQMGQE-----------EISASGTSYLNRTEAANVE 696
D P+ V P+ F+ G + + + G S N EA V
Sbjct: 549 LLK--DLPYEVEETDDTKEPLVFWDTQGGDFPEKTEDADLGKKAHLGDSKSNDMEALVVS 606
Query: 697 KIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREK 756
+ V + +G+ P I VITPY GQ A + + ++ Y IE+ SVD FQGREK
Sbjct: 607 RHVDALVDAGIHPEDIAVITPYNGQLAVLSQML-------REKYPSIELGSVDGFQGREK 659
Query: 757 DYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+ +++S VRSN +GFL + RRLNVA+TR + + I G+ + +SK
Sbjct: 660 EAVVVSLVRSNSEHEVGFLGERRRLNVAMTRPKRHLCICGDSETISK 706
>gi|303286453|ref|XP_003062516.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456033|gb|EEH53335.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 648
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 237/462 (51%), Gaps = 55/462 (11%)
Query: 389 PELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P L+ASQ AV L+ ++LI GPPGTGKT V +G ++L CA SNVAV
Sbjct: 193 PRLDASQKDAVAHALRAVDLALIHGPPGTGKTTVVVEYVAREVARG-ARILCCAASNVAV 251
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE------------KSE 495
D L E+++ ++ RL +R ++S +E+ +L QV D S +
Sbjct: 252 DNLVERLA----RITRLGHPAR-LLASVLEN-SLEAQVLRSDNSSLARDCERESAALRRR 305
Query: 496 LHKLQQLKDEQGELS---SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRL---AN 549
L KL K +G S K+ +A +R E+ SA+V+CCT GA L A
Sbjct: 306 LLKLADAKTREGAFSLELRRLAKETRARQRLAVDEVVASANVVCCTLAGALGGVLKDQAR 365
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F V+IDE+ QA E C ++ G K VVL GDH QL P ++ AAR GL+++LF+R
Sbjct: 366 STFDVVVIDEAAQALEASCWGAIMRGGK-VVLAGDHLQLPPTVLSDVAAREGLSETLFQR 424
Query: 610 LVLLGLK---PIRLQVQYRMHPSLSE---FPSNSFYEGTL-----QNGVTINERQSSGID 658
+ + L QYRMH + + SN+ Y+G L G T+ R +SG
Sbjct: 425 AHAKWYRENVAVMLTTQYRMHEDIMRRVLWASNAMYDGALLASEDARGRTL--RSASG-- 480
Query: 659 FPWPVPNRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ-IGV 714
P + G E G S N EAA +IV + SG V + +G+
Sbjct: 481 ----APLGALQLVDTAGCDCDERQEEEGASRDNPGEAAVAMRIVADLISSGAVAADDVGI 536
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
ITPY Q + + + N AL +K +E+++VD FQGREK+ I++S VRSN+ +GF
Sbjct: 537 ITPYSAQVGTLRDLRAANDAL----FKGVEISTVDGFQGREKEAIVISAVRSNDRGDVGF 592
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLS-KQPLWNGLLTHYK 815
L+D RR+NVA+TRAR V++ + + ++ K GL+ H++
Sbjct: 593 LSDARRMNVAVTRARARCVLVCDTETIARKDAFLAGLVKHFE 634
>gi|399218391|emb|CCF75278.1| unnamed protein product [Babesia microti strain RI]
Length = 1229
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 150/468 (32%), Positives = 233/468 (49%), Gaps = 55/468 (11%)
Query: 391 LNASQVFAVKSVLQRPISLIQ-GPPGTGKTVTSAAIVYHMAK-QGQGQVLVCAPSNVAVD 448
L +Q A KS ++ ++LIQ GPPGTGKT + +I++ +K ++L A SN+A D
Sbjct: 781 LTPAQSLACKSAIENELTLIQVGPPGTGKTHLACSIIHCWSKIYSYDKILAVADSNIAAD 840
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGE 508
L + ++ + +R+ S + +Q +K
Sbjct: 841 NLLQGLTDRDISAIRIGQGSEPELQE----------------------RAIQGMKRYNEY 878
Query: 509 LSSSDEKKYK---ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT- 564
+ D +YK LK E + A ++ TCVG G+ +++ F +V+IDE Q+
Sbjct: 879 TTLRDSGRYKEAMTLKTQMISEAVKRARIVIATCVGCGNEIVSSEVFTKVIIDECAQSIG 938
Query: 565 ----EPEC--LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPI 618
+ EC +IPL Q+VL+GDH QL P I+ + A GL+ SL ERL + +
Sbjct: 939 KLTLDIECSNIIPLTHSCNQLVLIGDHKQLRPTILSQDALFKGLSISLLERLAIFAPSCV 998
Query: 619 RL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQE 677
L VQ RMHPS+S+FP+ FYE L +G + F WP N F V
Sbjct: 999 HLLNVQRRMHPSISQFPNQHFYEHRLTDGENVFAYTPLK-GFKWPCEN----FNVCFVDV 1053
Query: 678 EISASGTSY--------LNRTEAANVEKIVTTFLRSGVVPS-QIGVITPYEGQRAYIVNY 728
I +G++Y N E V ++++F+ +G + S QIG++TPY+ Q+ ++
Sbjct: 1054 SIGCAGSNYERPQGQSKYNIIETNVVVALLSSFISAGEITSRQIGILTPYDSQKYHLKTK 1113
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
+ N + +E+ SVD FQG+EKD II S VRSN +GFL D RR+NV LTRA
Sbjct: 1114 I--NSTFPSDVCNGLEIDSVDGFQGKEKDLIIFSAVRSNSDGTVGFLKDSRRMNVMLTRA 1171
Query: 789 RYGIVILGNPKVLSKQPL-WNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
R GIV++G+ L + W L + ++ +++LK+ + QF
Sbjct: 1172 RRGIVVVGDRFTLMNETTNWKAWLQFLSDRNSIIR--ISDLKEHL-QF 1216
>gi|115433256|ref|XP_001216765.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189617|gb|EAU31317.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 701
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 243/482 (50%), Gaps = 78/482 (16%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A++ L P ++LI GPPGTGKT T ++ + ++GQ +VLVC PSN++VD
Sbjct: 225 LNDSQKEAIRFALAAPDVALIHGPPGTGKTHTLIELIVQLVRRGQ-RVLVCGPSNISVDN 283
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGEL 509
+ E+++ + VVR+ +R S L + Q TSE + + ++ ++ E E
Sbjct: 284 IVERLAPKEVSVVRIGHPARLLPSVLDHSLEVLTQ-----TSEAAAI--VRDVRREMDEK 336
Query: 510 SSSDEK-KYKALKRATEREIS------------------QSADVICCTCVGAGDPRLANF 550
+S K ++ KRA ++I + + V+ T GAG +L N
Sbjct: 337 HASIRKTRFGREKRAIYQDIKELRREFREREARCVDNLVRGSSVVLATLHGAGGHQLRNQ 396
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK-------KAARAG-- 601
+F V+IDE++QA E +C IPL L A +VVL GDH QL P + K A G
Sbjct: 397 KFDVVVIDEASQALEAQCWIPL-LTAPKVVLAGDHLQLPPTVKSKAGDAPPQDGAAEGDA 455
Query: 602 -------LAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
L ++F+RL+ + I+ L QYRMH + FPS+ YEG L + R
Sbjct: 456 DVVRGISLETTMFDRLLAMHGPAIKRMLTTQYRMHERIMRFPSDELYEGRLMAADAVKAR 515
Query: 653 QSSGIDFPWPV-----PNRPMFFYV-------------QMGQEEISASGTSYLNRTEAAN 694
D P+ V P+ F+ ++GQ+E + G S N EA
Sbjct: 516 LLK--DLPYEVQETDDTREPVVFWDTQGGDFPEKTEDNEVGQKE-ALLGESKSNEMEALV 572
Query: 695 VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGR 754
V K V +++GV P I VITPY GQ A + + ++ Y +E+ SVD FQGR
Sbjct: 573 VGKHVDALVQAGVRPEDIAVITPYNGQLAVLSQML-------REKYPGLELGSVDGFQGR 625
Query: 755 EKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHY 814
EK+ +++S VRSN +GFL + RRLNVA+TR + + + G+ + +S+ +G L +
Sbjct: 626 EKEAVVVSLVRSNSKHEVGFLGERRRLNVAMTRPKRHLCVCGDSETISRG---SGFLKRW 682
Query: 815 KE 816
E
Sbjct: 683 ME 684
>gi|425771573|gb|EKV10011.1| tRNA-splicing endonuclease, putative [Penicillium digitatum Pd1]
Length = 2154
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 255/537 (47%), Gaps = 95/537 (17%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ------------- 436
+N +Q A+KS + +LIQGPPG+GKT T A+V + G+
Sbjct: 1306 INRAQARAIKSAVDNDAFTLIQGPPGSGKTKTIIALVGSLLSDVLGKQLIKVNGAPVARN 1365
Query: 437 -----VLVCAPSNVAVDQLAEKI-------SATGLKVVRLCAKSREAVSSPVEHLTLHYQ 484
+L+CAPSN AVD+L ++ + KV L +A+++ V +TL
Sbjct: 1366 ALSKKLLLCAPSNAAVDELVMRLKDGVRTTNGRQEKVSVLRLGRSDAINTKVLDVTLDEM 1425
Query: 485 V-----------------------RHLDTSEKSELHKLQQ------------------LK 503
V + DTS K +L + +K
Sbjct: 1426 VNARLNQDPSKGNGVDLQKLYEEHKTTDTSFKELRGQLDEARAKGLPPPEELEREFDLMK 1485
Query: 504 DEQGELSSSDEK----------KYKALKRATEREISQSADVICCTCVGAGDPRL--ANFR 551
++ +LS+S +K KR + +I + VIC T G+G N
Sbjct: 1486 KKRSQLSTSIDKARDQNHTLARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQGMNVE 1545
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F V+IDE+ Q E LIPL G + VLVGD QL P ++ K A++ QSLF R+
Sbjct: 1546 FETVIIDEAAQCIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQ 1605
Query: 612 LLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN--RPM 668
+ + L +QYRMHP++S FPS +FY+G LQ+G + + + PW P
Sbjct: 1606 KNHPQDVHLLDIQYRMHPAISHFPSVTFYDGKLQDGPDMAKLRQR----PWHQSELLSPY 1661
Query: 669 FFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYI 725
F+ G +A G S +N E A + + T ++ +IG+ITPY+GQ +
Sbjct: 1662 RFFDVQGMHSSAARGHSLINYAELQVAMQLYDRLITDVKEYDFAGKIGIITPYKGQLREL 1721
Query: 726 VN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 784
N + R G + + ++++ + D+FQGRE + II SCVR++ ++GIGFL D RR+NV
Sbjct: 1722 KNQFTQRYG---EDILRKVDFNTTDAFQGRESEVIIFSCVRAS-NKGIGFLADIRRMNVG 1777
Query: 785 LTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKI 841
LTRA+ + +LGN + L + WNGL+ + +E EG + + Q QF K+I
Sbjct: 1778 LTRAKSSLWVLGNSQSLEQGQFWNGLIKNARERNVYTEGDIVKILQK-PQFTGYKEI 1833
>gi|296413292|ref|XP_002836348.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630165|emb|CAZ80539.1| unnamed protein product [Tuber melanosporum]
Length = 1971
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 179/542 (33%), Positives = 262/542 (48%), Gaps = 108/542 (19%)
Query: 366 LGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAA 424
L E Q+VR GL ++N Q A+ S ++ +LIQGPPGTGKT T
Sbjct: 1219 LEEPTEKQIVRTR--------GLYKVNEPQARAILSAVKNTGFTLIQGPPGTGKTKTVVG 1270
Query: 425 IVYHMAKQGQG-------------------QVLVCAPSNVAVDQLAEK-----ISATGL- 459
IV + G ++LVCAPSN AVD+L + ++A G
Sbjct: 1271 IVGALLTPKVGSTVIQIPGSMNKSPKPTTKKLLVCAPSNAAVDELVLRFKKGILTAKGEE 1330
Query: 460 ---KVVRLCAKSREAVSSPVEHLTLHYQV-------------RHLDTSEKSELH------ 497
KVVR+ KS +AV+ V +TL V ++ D E + H
Sbjct: 1331 MQPKVVRI-GKS-DAVNFTVRDVTLDELVERKMAPTKESANSKNADMDELRQKHRAILDE 1388
Query: 498 ---KLQQLKDE----------QGELSS---------------SDEKK-----YKALKRAT 524
KL+QL+D Q E+ S D+KK + LKR
Sbjct: 1389 RDAKLKQLEDARAKSIDPGTLQSEIDSLNATLRETRRSLDLKRDQKKESSRNAEVLKRRI 1448
Query: 525 EREISQSADVICCTCVGAGDPRLANFR--FRQVLIDESTQATEPECLIPLVLGAKQVVLV 582
++EI A +IC T G G L N F V+IDE+ Q+ E LIPL G ++ +LV
Sbjct: 1449 QQEIMDEAHIICATLSGTGHDLLRNINVDFETVIIDEAAQSVELSALIPLKFGCEKCILV 1508
Query: 583 GDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEG 641
GD QL P ++ ++AA+ +SLF R+ K + L +QYRMHP +S FP FY+
Sbjct: 1509 GDPKQLPPTVLSREAAKFSYEKSLFVRMQENHPKDVHLLSIQYRMHPMISSFPRKQFYDS 1568
Query: 642 TLQNGVTINE-RQSSGIDFPWPVPNRPMFFYVQMGQEEISASGT-SYLNRTEAANV---- 695
L++G + E R P P R F+ GQE SA G S +NR EA +
Sbjct: 1569 ELEDGENMKELRTEVWHKNPIYAPYR---FFNIAGQE--SAGGLHSLVNRQEAQSALSLY 1623
Query: 696 EKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGRE 755
+++ F ++ +IG+ITPY+ Q+ ++ R+ + + I+ + D+FQGRE
Sbjct: 1624 QRLTADFPQTN-FDGKIGIITPYK-QQINLLKTTFRD-VYGENICDTIDFNTTDAFQGRE 1680
Query: 756 KDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+D II SCVR+++ GIGFL+D RR+NV LTRA++ + +LG+ L + LW L+ K
Sbjct: 1681 RDIIIFSCVRASQEGGIGFLSDVRRMNVGLTRAKFSLFVLGHSTSLMRNRLWASLVQDAK 1740
Query: 816 EH 817
+
Sbjct: 1741 DR 1742
>gi|254579116|ref|XP_002495544.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
gi|238938434|emb|CAR26611.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
Length = 2130
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 182/624 (29%), Positives = 295/624 (47%), Gaps = 138/624 (22%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G +D+ NH F+ +S M T + TS+ Y+ L+
Sbjct: 1215 LKNTKGDNIDLTLRVHRNHKFAKFLTLRSEIHAVKIMQMTTVEREYTSLEALEYYDLVEQ 1274
Query: 369 -------------EVEVQMVRNTLPRRFGAPGLPELNASQVFA-VKSVLQRPISLIQGPP 414
+ E+ +++ LN SQ A V +VL+ SLIQGPP
Sbjct: 1275 ILRAKPTPQMDVSQAEIDLIKKKY----------NLNLSQAAAIVNTVLKEGFSLIQGPP 1324
Query: 415 GTGKTVTSAAIV-YHMAKQG------------------------QGQVLVCAPSNVAVDQ 449
GTGKT T IV Y ++ + + +VL+CAPSN AVD+
Sbjct: 1325 GTGKTKTILGIVGYFLSTRSSLPSNAIKTPGADSSNMTTDQLLKKQKVLICAPSNAAVDE 1384
Query: 450 LAEKI-----SATGL----KVVRLCAKSREAVSSPVEHLTLHYQV------RHLDTSEKS 494
+ ++ + G+ +VR+ +AV++ ++ TL V ++ + S+
Sbjct: 1385 IVLRLKEGVCNKEGMLFKPNIVRVGRS--DAVNAAIKDFTLEELVDKQVSQKNYEFSKNP 1442
Query: 495 EL--------HKLQQLK----DEQG----ELSSSD----EKKYKALKR-----ATEREIS 529
EL HK ++L+ E G +S+ D + K + L R ER++
Sbjct: 1443 ELEKKFNEAVHKRRELRAKLDAENGTPTSTMSTEDIANLQLKIRELSRQLNELGRERDLM 1502
Query: 530 Q-----------------------SADVICCTCVGAGDPRLANF--RFRQVLIDESTQAT 564
+ +D+IC T G+ L++ +F V+IDE+ Q T
Sbjct: 1503 RERNSVNYRNRDLDRRNAQARTLAKSDIICSTLSGSAHDVLSSLGVKFDTVIIDEACQCT 1562
Query: 565 EPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQY 624
E +IPL G ++ ++VGD QL P ++ A+ QSLF R+ + P L VQY
Sbjct: 1563 ELSSIIPLRYGGRRCIMVGDPNQLPPTVLSGAASSFKYNQSLFVRME-KNITPYLLDVQY 1621
Query: 625 RMHPSLSEFPSNSFYEGTLQNG---VTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISA 681
RMH S+S+FPS FY+ L++G T+N+R + + P FF + G+E+ SA
Sbjct: 1622 RMHSSISKFPSMEFYKSRLKDGPEVDTLNQRPWHELKYSRPYK----FFDILTGREQQSA 1677
Query: 682 SGTSYLNRTEAANVEKIVTTFLRSG---VVPSQIGVITPYEGQRAYI-VNYMSRNGALRQ 737
SY+N E ++V S+IGVI+PY+ Q + + ++SR G
Sbjct: 1678 KTMSYVNLDEIKVAMELVEYLFHKFDKIDFTSKIGVISPYKEQASRMRREFLSRFGG--- 1734
Query: 738 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ-GIGFLNDPRRLNVALTRARYGIVILG 796
+ +E++ ++D FQG+EK+ II+SCVR+++ + +GFL D RR+NVALTRA+ + ILG
Sbjct: 1735 TITREVDFNTIDGFQGQEKEIIIISCVRADDTKSSVGFLRDFRRMNVALTRAKTSMWILG 1794
Query: 797 NPKVLSKQPLWNGLLTHYKEHECL 820
+ K L K LWN L+T ++ C+
Sbjct: 1795 HQKSLVKNKLWNRLITDAQQRGCM 1818
>gi|242780461|ref|XP_002479600.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218719747|gb|EED19166.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 713
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 241/488 (49%), Gaps = 72/488 (14%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L + I+LI GPPGTGKT T ++ M ++ ++LVC PSNV+V
Sbjct: 228 PTLNHSQKEAIRFALASKEIALIHGPPGTGKTHTLIELILQMIRRNM-RILVCGPSNVSV 286
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + +VR+ +R E ++ E + VR +++ +
Sbjct: 287 DNIVERLAPHRVPIVRVGHPARLLSSVLDHSLEVLTQTSEAAEIVRDVRKEIDEKQASIR 346
Query: 498 KLQQLKDEQ---GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + G+L K+++ + ++ + V+ T GAG RL N +F
Sbjct: 347 KTRNGRERREIYGDLKEL-RKEFRERESKCVEDLVTGSKVVLATLHGAGGHRLKNQKFDV 405
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM-----------------CKKA 597
V+IDE++QA E +C IPL L A + VL GDH QL P I +K+
Sbjct: 406 VIIDEASQALEAQCWIPL-LTASRAVLAGDHLQLPPTIKSSNIDSSKKTSKTKVKEAEKS 464
Query: 598 AR------AGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 649
+ L Q++F+RL+ L I+ L QYRMH + +FPSN YEG L ++
Sbjct: 465 SSLDSLQGVSLGQTMFDRLLALHGPSIKRMLTTQYRMHEKIMQFPSNEMYEGKLIAADSV 524
Query: 650 NERQSSGIDFPWPVPN-----RPMFFYVQMG--------QEEISASG----TSYLNRTEA 692
+R D P+ V + P+ F G E+ + G S N EA
Sbjct: 525 KDRLLK--DLPYGVEDTDDTKEPLVFIDTQGGDFPEKAEDEDATIKGGLLSESKSNEMEA 582
Query: 693 ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQ 752
+ V + +GV P I VITPY Q A I LR++ Y IE+ SVD FQ
Sbjct: 583 RVAIRHVEGLIDAGVRPEDIAVITPYNAQVALIAQ------CLREK-YPGIEIGSVDGFQ 635
Query: 753 GREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL----WN 808
GREK+ I++S VRSNE +GFL + RRLNVA+TR + + + G+ + +SK W
Sbjct: 636 GREKEAIVVSLVRSNEKHEVGFLGEKRRLNVAMTRPKRHLCVCGDSETISKGSKFLKNWI 695
Query: 809 GLLTHYKE 816
G L + +
Sbjct: 696 GFLEEHAD 703
>gi|440492195|gb|ELQ74785.1| tRNA-splicing endonuclease positive effector (SEN1), partial
[Trachipleistophora hominis]
Length = 525
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 259/483 (53%), Gaps = 82/483 (16%)
Query: 371 EVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRP--ISLIQGPPGTGKT--------- 419
+ +V N + R G LN SQ A+K+V SLI GPPGTGKT
Sbjct: 73 DASLVENVILRIHG------LNGSQQIAIKNVYTSAAFFSLIHGPPGTGKTKMIVSLIES 126
Query: 420 VTSAAIVYHMAKQG-----QGQVLVCAPSNVAVDQLAEKIS--------ATGLKVVRLCA 466
+ SA I+ + + + ++L+CAPSN AVD+LA++I+ L+V+R+
Sbjct: 127 LFSAPIISALKSKMFITNREPRILICAPSNAAVDELAKRINDLRMKGREEEKLRVLRIGV 186
Query: 467 KSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQG----ELSSSD--EKKYKAL 520
++ + ++ LTL + +L++ K+ G E+++S+ ++K++ L
Sbjct: 187 QNN--IDDNLKMLTLDCIIEK----------ELEERKNRAGLTNFEVTNSERTKRKFELL 234
Query: 521 KRATEREISQSADVICCTCVGAGDP--RLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
KR+ +V+C T + ++AN F ++IDE+ Q+ E LIPL +
Sbjct: 235 KRS---------NVVCATLSSSAKELIKVANIDFDILVIDEACQSVETSTLIPLKFNPTK 285
Query: 579 VVLVGDHCQLGPVIM--CKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSN 636
VVLVGD QL P ++ CK QSLF RL + + L VQYRMHP++ EFP+
Sbjct: 286 VVLVGDPKQLPPTVISNCK-----PYEQSLFVRL-QKTYQSVLLNVQYRMHPTIVEFPNQ 339
Query: 637 SFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVE 696
FY+ LQ ++ +R++ + P+ ++Q+ EE + S S+ N EA +
Sbjct: 340 YFYDKRLQTHKSVKKRENPYQNVVPPIS------FIQVNGEERTDSYFSFYNVAEARYIG 393
Query: 697 KIVTTFLRSGV---VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQG 753
I++ +++ + ++IG+ITPY+ Q I + +R+ + + V +VD FQG
Sbjct: 394 NIISELMKNVKNYDLSNKIGIITPYKAQMKKIKEVLL---GIRKDILDFVCVNTVDGFQG 450
Query: 754 REKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
+EKD I++S V+S + IGFL+D RR+NV++TRA++ ++I+GN KVLS W +L+H
Sbjct: 451 QEKDVILISTVKS---KNIGFLSDLRRINVSITRAKHSLIIIGNTKVLSTSNAWKSMLSH 507
Query: 814 YKE 816
Y++
Sbjct: 508 YRK 510
>gi|374586342|ref|ZP_09659434.1| AAA ATPase [Leptonema illini DSM 21528]
gi|373875203|gb|EHQ07197.1| AAA ATPase [Leptonema illini DSM 21528]
Length = 646
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 244/517 (47%), Gaps = 54/517 (10%)
Query: 332 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPEL 391
D W+ F Q E + LLG+ + + P R EL
Sbjct: 128 DLTWREMRFALQQMLEAEDQKGEKGQRARLRDRLLGYTELSALTLESEPHRSN-----EL 182
Query: 392 NASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQL 450
NASQ AV +L P +++ GPPGTGKT T A + + ++ + VLVCA +N AVD L
Sbjct: 183 NASQDEAVTGILNTPDFAVVHGPPGTGKTTTLVAAIAALYRREES-VLVCAATNAAVDLL 241
Query: 451 AEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELS 510
A K+ G+ V+R+ +R V + LTL ++ +SE L + + E +L
Sbjct: 242 ALKLDEQGIPVLRIGHPAR--VYDAAQALTLEGRM-----ESRSEAKLLAKYRAEAAQLF 294
Query: 511 SSDEK------------------KYKALKRATEREISQSA--------DVICCTCVGAGD 544
+ +Y+AL++ T RE+ ++A V+C T GA
Sbjct: 295 RQARRFRRSFGAAERAERESLFAEYRALQK-TIREMEKTALGDIIERTPVVCATLTGASH 353
Query: 545 PRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
P + RF V+IDE+TQA EP C IPL+ +++++ GDH QL P+I + L++
Sbjct: 354 PSIREKRFTTVVIDEATQALEPACYIPLLKNPERIIMAGDHQQLAPLIRLPASP---LSE 410
Query: 605 SLFERLVLLGLKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
+LF +++ R L QYRM P + F + FYEG L ++ R +
Sbjct: 411 TLFAKMIERHKDSGRVFFLNEQYRMQPVILGFSNQRFYEGRLVTHDSVLNRPPMRMKPEA 470
Query: 662 PVPNRPMFFYVQMG----QEEISASGTSYLNRTEAANVEKIVTTFLRSGVV-PSQIGVIT 716
V +V EE A S NR EA + +IV LR G P + +I
Sbjct: 471 EVSLTGSLLFVDTAGSDATEEQDADSESRFNRFEAMLLVRIVERMLRLGEDDPESVALIA 530
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PY Q + + S L + IEV +VDSFQG E+D+I +S R+NE IGFL
Sbjct: 531 PYRAQVDLLRSLCSDVATLPTG--QAIEVDTVDSFQGAERDWIGVSFTRNNEEAEIGFLK 588
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
D RR NVA+TRAR ++++G+ LS P + L+ +
Sbjct: 589 DLRRTNVAMTRARRRLILVGDSTTLSMHPFYADLIAY 625
>gi|325104103|ref|YP_004273757.1| ATPase AAA [Pedobacter saltans DSM 12145]
gi|324972951|gb|ADY51935.1| AAA ATPase [Pedobacter saltans DSM 12145]
Length = 629
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 261/520 (50%), Gaps = 45/520 (8%)
Query: 321 VPVDINHG-FSVDFVWKSTSFDRMQGAMKTFAVDE-TSVSGYIYHHLLGHEVEVQMVRNT 378
+P +N G V ++ + S+D M+ A+K + E + L G E +
Sbjct: 112 LPDWMNKGKIGVQLLFDNNSYDEMKRALKKAEIIERNDTENRLIKVLTGVE------KPF 165
Query: 379 LPRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQV 437
+ LN SQ AV S+L + ++++ GPPGTGKT T + + Q Q+
Sbjct: 166 FKKEASGYISSRLNDSQNQAVNSILAAQELAILHGPPGTGKTTTLVEAISALYMQSGKQI 225
Query: 438 LVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKSEL 496
LV APSN AVD L K++ G+ V+R+ R VS +E LTL Y++ +H E +L
Sbjct: 226 LVTAPSNTAVDLLTLKLAEKGVNVIRIGNPIR--VSQKLEELTLDYKINQHQYNKEIKQL 283
Query: 497 HK--------LQQLKDEQGELSSSDEKK-----YKALKRA--TEREISQS----ADVICC 537
K + K G+L K +K LK+ TE IS+ A VI
Sbjct: 284 KKQAAEYRNMAHKYKRSFGKLEREQRKALFDEAHKLLKQVEQTESFISEDLLNKAQVITA 343
Query: 538 TCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
T VG + + + + V+IDE+ QA EP C IP VL +++V+ GDH QL P + K+A
Sbjct: 344 TLVGVNNYAIKDRDYDIVVIDEAAQALEPACWIP-VLRSRKVIFAGDHLQLPPTVKSKEA 402
Query: 598 ARAGLAQSLFERLVLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
+ GL+ +L E+ +G P L QYRM+ ++++PS YE L ++ R+
Sbjct: 403 EKLGLSSTLLEKN--MGFHPEAVSLLTTQYRMNKEINDYPSIELYESKLHADRSVATRKL 460
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS-GVVPSQIG 713
D P + + E+I+ GTS N EA K +T L++ +
Sbjct: 461 DQKDIPVEFVDTAGCSF----DEKIN--GTSVYNPEEANFTLKHLTGLLQNHNKAKYSVA 514
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
VI+PY+ Q+ ++ + + + +I++ ++DSFQG+E+D + +S RSN IG
Sbjct: 515 VISPYK-QQVELLKELIEDWEDLKPFLAQIDINTIDSFQGQERDIVYISLTRSNSENAIG 573
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
FL+D RR+NVA+TRAR +V++G+ LSK ++ +++
Sbjct: 574 FLSDIRRMNVAITRARMKLVVIGDSGTLSKNAFYSDFISY 613
>gi|254578954|ref|XP_002495463.1| ZYRO0B11968p [Zygosaccharomyces rouxii]
gi|238938353|emb|CAR26530.1| ZYRO0B11968p [Zygosaccharomyces rouxii]
Length = 1101
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 241/479 (50%), Gaps = 66/479 (13%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVDQ 449
N SQ A++ VL ++++QGPPGTGKT T ++ M + ++C A SN+A+D
Sbjct: 633 FNESQKSAIQHVLNNSVTVLQGPPGTGKTSTIEELIIQMIRNFSSWPILCVAASNIAIDN 692
Query: 450 LAEKI--SATGLKVVRLCAKSREAVSS---PVEHLTLHYQVR-HLDTSEKSELHKLQQLK 503
+AEK + ++++R+ + S+E+ + P+ + LH V L K HKL+
Sbjct: 693 IAEKFIDNKDSIRILRIVSDSKESQYNKDHPLGKICLHNIVNDQLPPQLKEVQHKLRT-- 750
Query: 504 DEQGELSSSDEKKYKALKRA----TEREISQSADVICCTCVGAGDPRLANFR-FRQVLID 558
G+ + +Y L A +R I Q A ++ T + AG RL + V++D
Sbjct: 751 ---GKSHEVSKNQYNNLSTAQNQIADRYIMQ-AQILFTTTITAGGRRLKAIKELPVVIMD 806
Query: 559 ESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL-- 615
ESTQ++E L+PL L G ++ V VGD QL + L SLFER++L G
Sbjct: 807 ESTQSSEAATLVPLSLPGIRKFVFVGDEKQLSSFSQIPQ-----LEMSLFERVLLNGCYK 861
Query: 616 KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMG 675
P L QYRMHP +SEFP FY G L++GVT ++ I +P F +G
Sbjct: 862 NPHMLDTQYRMHPIISEFPRQRFYGGLLKDGVTEEQKNWQSIKYPL------FFLRCDLG 915
Query: 676 QE-EISAS-----GTSYLNRTEAANVEKIVTTF-LRSGVVPSQIGVITPYEGQRAYIVNY 728
E +++ S G +Y N+ E + ++V L V QIG++TPY QR I
Sbjct: 916 DETKVTNSHNGLRGYTYTNKHECQLLLQMVYKLILDKQVSRDQIGIVTPYSAQRDAISEL 975
Query: 729 MSRNG-------ALRQQL-------------------YKEIEVASVDSFQGREKDYIILS 762
+ ++ A+ Q++ +I +A+VDSFQG EK++I+ S
Sbjct: 976 LVQDRIVNPQGLAMEQEIDEMDPFDAMAGSKKNSINIVNDIYIATVDSFQGHEKNFILFS 1035
Query: 763 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECL 820
VR+N IGF+ND RR+NVALTRA+ G++++GN L LW + + + +
Sbjct: 1036 TVRNNPLGKIGFVNDARRMNVALTRAKNGLILVGNDHTLRNGSDLWKDYIDYLNSRQLI 1094
>gi|169609334|ref|XP_001798086.1| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
gi|160701819|gb|EAT85222.2| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
Length = 1955
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 175/546 (32%), Positives = 255/546 (46%), Gaps = 105/546 (19%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIV-------------------YHMA 430
+N +Q A+KS + +LIQGPPG+GKT T AIV +
Sbjct: 1267 VNKAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAVLSDSLRNRGTTITVPGQQRS 1326
Query: 431 KQGQGQVLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSR----------- 469
+ ++LVCAPSN AVD+L + A G+K +VRL + +
Sbjct: 1327 ETASKKLLVCAPSNAAVDELVMRFKA-GIKTLNGEVRKVNIVRLGRQDKLNAAVQDVCLE 1385
Query: 470 -------------------EAVSSPVE-HLTLHYQVRH----LDTSE---------KSEL 496
EA S E H + Q+R+ D+ E +S+L
Sbjct: 1386 GLISKRLGQDPGQGKGQDPEAKSKMYEEHKQVSEQLRNGNAQRDSGELKGDAAAKLESDL 1445
Query: 497 HKLQQLKDEQGEL--SSSDEKKYKAL-----KRATEREISQSADVICCTCVGAGDPRLA- 548
L+Q K G +S DE++ ++ +R + I A +IC T G+G
Sbjct: 1446 FALRQRKAALGRQIDNSKDEERLQSRNSDLSRRRAQEAILNDAHIICATLSGSGHEMFQG 1505
Query: 549 -NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
+ F V+IDE+ Q E LIPL G + VLVGD QL P + K A+R +QSLF
Sbjct: 1506 LSIEFETVIIDEAAQCVELSALIPLKYGCAKCVLVGDPKQLPPTVFSKVASRHQYSQSLF 1565
Query: 608 ERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQSSGIDFPW-- 661
R+ + L QYRMHP +S FPS FY+G L +G TI ++ PW
Sbjct: 1566 ARMEKNHPNDVHLLDTQYRMHPEISLFPSREFYDGKLMDGGDMATIRKQ-------PWHQ 1618
Query: 662 PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKI---VTTFLRSGVVPSQIGVITPY 718
+ P F+ GQ+ + G S +NR E K+ +T+ +IG+ITPY
Sbjct: 1619 SMLFGPYRFFDVAGQQSAAPKGHSLINRAEIEVAMKLYHRLTSDFPDYNFRGKIGIITPY 1678
Query: 719 EGQRAYI-VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
+ Q + + S GA Q+ ++IE + D+FQGRE + II SCVR+++ G+GFL D
Sbjct: 1679 KSQLTELKTRFASVYGA---QIIEDIEFNTADAFQGRESEIIIFSCVRASDRGGLGFLED 1735
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN-LKQSMVQFQ 836
RR+NV LTRA+ + +LG+ LS+ W GL+ +E + G L L Q +F
Sbjct: 1736 IRRMNVGLTRAKSSMWVLGHAPSLSRGEFWRGLVEDAQERKRFTTGNLTQMLNQHSSKFP 1795
Query: 837 KPKKIY 842
PK+ Y
Sbjct: 1796 APKEGY 1801
>gi|284038257|ref|YP_003388187.1| ATPase AAA [Spirosoma linguale DSM 74]
gi|283817550|gb|ADB39388.1| AAA ATPase [Spirosoma linguale DSM 74]
Length = 632
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 237/462 (51%), Gaps = 48/462 (10%)
Query: 388 LPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVA 446
LP LN SQV AV +L ++++ GPPGTGKT T + + KQ ++LV APSN A
Sbjct: 175 LPRLNPSQVAAVGKILTANELAIVHGPPGTGKTTTLVQAIKALHKQDNKKLLVVAPSNTA 234
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQ 506
VD L+EK+ GL V+R+ +R VS + LTL ++V D E KL++ +E
Sbjct: 235 VDLLSEKLHDEGLSVLRVGNPAR--VSERLMALTLDHKVA--DHPAMKEARKLKKQANEF 290
Query: 507 GELSSSDEKKY--------KALKRATEREISQ--------------SADVICCTCVGAGD 544
++ ++ + KAL R + + A VI T VGA
Sbjct: 291 KNMAHKYKRNFGKAERDQRKALFDEAHRIMKEVGNTEQYVIDDLVGKAQVITATLVGANH 350
Query: 545 PRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
+ N + V+IDE+ QA EP C IP +L A++VVL GDHCQL P I +AAR GL+
Sbjct: 351 YTVRNLTYHTVVIDEAGQALEPACWIP-ILKAQKVVLAGDHCQLSPTIKSAEAARKGLSH 409
Query: 605 SLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV 663
+L E+ + L + + L QYRMH + + S FY+ L+ ++ + S D
Sbjct: 410 TLLEKCIKLHPEAVSLLDEQYRMHEHIMGYSSQVFYKNKLKAHGSVA--RHSLFD----- 462
Query: 664 PNRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVT---TFLRSGVVPSQ---IGV 714
+ + F G E++ GTS N EAA + K +T T L + I +
Sbjct: 463 SDTALVFVDTAGCGFDEKLD--GTSSTNPEEAALLMKHLTQLVTDLSTRYTKENFPTIAI 520
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
I+PY+ Q + + + L Q I V ++DSFQG+E+D + +S RSN IGF
Sbjct: 521 ISPYKQQINVLKDQLLHTPEL-QPYSDRISVNTIDSFQGQERDIVYISMTRSNAEGEIGF 579
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
L+D RR+NVA+TRAR +VI+G+ L+ P + + + ++
Sbjct: 580 LSDIRRMNVAMTRARKKLVIVGDSATLAGLPFYADFIAYAEQ 621
>gi|50293759|ref|XP_449291.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528604|emb|CAG62265.1| unnamed protein product [Candida glabrata]
Length = 1125
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/478 (32%), Positives = 234/478 (48%), Gaps = 59/478 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC-APSNVAVDQ 449
N SQ A+++VL ++++QGPPGTGKT T I+ M + ++C A SN+A+D
Sbjct: 652 FNDSQKRAIQNVLNNKVTILQGPPGTGKTATIEEIILQMREHFNSFPILCVAASNIAIDN 711
Query: 450 LAEKISAT--GLKVVRLCAKSRE---AVSSPVEHLTLHYQVR-HLDTSEKSELHKLQQLK 503
+AEK +K++R+ ++++E + P+ + LH VR +L+ + KL
Sbjct: 712 IAEKFIEKRPDIKILRIVSRTKEKEYGMDHPLGKICLHNIVRENLNEESRDTARKLAM-- 769
Query: 504 DEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDESTQ 562
+ S + +Y K + +I T V AG L + V++DESTQ
Sbjct: 770 GQTKSFSKNALMRYFRDKEGIVNKYINQCTIIFSTNVAAGSTELKVIKEIPVVIMDESTQ 829
Query: 563 ATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL--KPIR 619
++E LIPL L G K V VGD QL + L+ SLFER++ G P
Sbjct: 830 SSEVSTLIPLSLPGIKTFVFVGDDKQLSSF-----SDIPQLSLSLFERILQNGTYQNPHM 884
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI-------DFPWPVPNRPMFFYV 672
L QYRMHP++SEFP Y+ LQ+GVT ++Q + D+ NR V
Sbjct: 885 LNTQYRMHPTISEFPRTMIYKNELQDGVTAEQKQLDKVAHPVYFYDYRATAQNREQLHRV 944
Query: 673 QMGQEEISASGTSYLNRTEAANVEKIVTTF-LRSGVVPSQIGVITPYEGQRAYIVNYMSR 731
+ + SY NR E + ++V + GV IG+ITPY GQR + +
Sbjct: 945 RRR----DVTTVSYYNRAECRMILEVVHMLVIEKGVPLEDIGIITPYAGQREQLATMVQA 1000
Query: 732 NGAL--------RQQLYKE--------------------IEVASVDSFQGREKDYIILSC 763
+ + +Q K+ ++V++VD+FQG EK I+ SC
Sbjct: 1001 DELINPRGLVIEKQSEEKDLFSVNEQSMGSNNTICIVNGLQVSTVDAFQGHEKSVIVFSC 1060
Query: 764 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECL 820
VR+NE IGFL D RRLNVALTRA+ +VI+G VLS+ +W + + +++ +
Sbjct: 1061 VRNNESNTIGFLKDQRRLNVALTRAKNSLVIVGCSSVLSRSDSIWKKYIDYLSKNKMI 1118
>gi|440713093|ref|ZP_20893698.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SWK14]
gi|436442112|gb|ELP35280.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SWK14]
Length = 735
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 237/458 (51%), Gaps = 48/458 (10%)
Query: 390 ELNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
ELN Q AV +++ +++I GPPGTGKT T A I+ ++G+ +VL CA SN AVD
Sbjct: 282 ELNPPQRDAVAFAMMADDVAIIHGPPGTGKTTTIAEIIAQSVERGE-RVLACAASNTAVD 340
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE--KSELHKLQQL---- 502
L E++ VVR+ +R V ++ TL V TS K +L Q+
Sbjct: 341 NLLERLVCLMPNVVRVGHPAR--VFESLQEHTLDALVESDPTSTVIKDLRRELDQILREA 398
Query: 503 -----------KDEQGELSSSDEKKYKALKRATEREISQS----ADVICCTCVGAGDPRL 547
+ ++ EL + + + + + R+ ER I ++ ADVIC T + L
Sbjct: 399 NRPIREGGGRERKQRAELFN-EAGRLRGMIRSQERSIVRAVIDRADVICTTTT-IDEELL 456
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
++ F V++DES Q TEP + +L A +++L GDHCQL P ++ AAR G+ SL
Sbjct: 457 SDQSFDVVVVDESCQCTEP-GMWQAILRADRLILAGDHCQLPPTVLSDDAARIGMRDSLM 515
Query: 608 ERLVLLGLKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
+RLV + I RL VQYRM+ S+ F S+ FY+GTL ++ ++ D P N
Sbjct: 516 QRLVHRYGEKIYRRLTVQYRMNESIMRFSSDHFYDGTLIADASV--KRHLLCDLPNVEEN 573
Query: 666 ----RPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
P+ G +EE+ G S LN EA + ++V GV QI VI PY
Sbjct: 574 DFTSEPLLLIDTAGAGYEEELEPDGQSKLNHGEAKVILQLVKQLADMGVTGDQIAVIAPY 633
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q RN +R L IE+ +VD FQGREK+ ++++ RSN IGFL+D
Sbjct: 634 AAQ--------VRNLRMRLDL-DGIEIDTVDGFQGREKEVVLITMTRSNPDGEIGFLSDQ 684
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
RR NVALTRA+ ++++G+ L ++ L ++++
Sbjct: 685 RRSNVALTRAKRKLIVVGDSATLCNHEFYSELFGYFED 722
>gi|148906976|gb|ABR16632.1| unknown [Picea sitchensis]
Length = 691
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 234/448 (52%), Gaps = 52/448 (11%)
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 463
QRP+ +IQGPPGTGKT ++ +++G+ ++LV APSN AVD + E+++ GL +VR
Sbjct: 232 QRPVLVIQGPPGTGKTSVLTELICIASRKGE-RMLVTAPSNAAVDNMVERLADMGLNIVR 290
Query: 464 LC-------AKSREAVSSPVEHLTLHYQ---VRHLDTSEKSELHKLQQLKDEQGELSSSD 513
+ A + +++ S VE+ ++ R D + H L+ G
Sbjct: 291 VGNPVRMSPAVASKSLGSIVENRLASFRRELARKRDDLKNDLRHCLKDDSLAAGIRQLLK 350
Query: 514 EKKYKALKRATE--REISQSADVICCTCVGAGDP---RLANFRFRQVLIDESTQATEPEC 568
+ K ++ E EI +A V+ CT GA DP +LA+F V+IDE+ QA EP C
Sbjct: 351 QLKKTLKRKEEETVNEILSNAQVVLCTNTGAADPLVRKLASFDL--VIIDEAGQAIEPSC 408
Query: 569 LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL---GLKPIRLQVQYR 625
IP++ G K+ +L GD+CQL PVI+ ++A GL SL ER L GL + L VQYR
Sbjct: 409 WIPILQG-KRTILAGDNCQLAPVILSRRAMEGGLGLSLLERAARLYAGGLSHM-LSVQYR 466
Query: 626 MHPSLSEFPSNSFYEGTLQNGVTINER---QSSGIDFPWPVPNRPMFFY--------VQM 674
M+ +++ + S Y G+LQ+ + S I W + P+ + +
Sbjct: 467 MNDAIASWASKEMYGGSLQSSPAVASHLLVDSPFIKATW-ITQCPLLLLDTRMPYGSLSL 525
Query: 675 GQEE-ISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRN 732
G EE + +GT S+ N EA + + V + + +GV+P I V +PY Q
Sbjct: 526 GCEEHLDLAGTGSFYNEGEADILVQHVRSLIFAGVMPMDIAVQSPYIAQVQL-------- 577
Query: 733 GALRQQLYK-----EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTR 787
LR++L + I VASVDSFQGRE D +++S VRSN +GFL D RR+NVA+TR
Sbjct: 578 --LRERLDQIPEAAGIRVASVDSFQGREADAVVISMVRSNTLGAVGFLGDSRRINVAITR 635
Query: 788 ARYGIVILGNPKVLSKQPLWNGLLTHYK 815
AR + ++ + + LL H +
Sbjct: 636 ARKHVAVVCDSSTICHNTFLARLLKHIR 663
>gi|164658495|ref|XP_001730373.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
gi|159104268|gb|EDP43159.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
Length = 1900
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 167/521 (32%), Positives = 251/521 (48%), Gaps = 105/521 (20%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------- 435
ELN Q AV + ++ P SLIQGPPGTGKT T A+V + G
Sbjct: 1151 ELNEPQARAVVATMRTPGFSLIQGPPGTGKTKTIRALVASFLSRRAGTSVGPKKAAAPAR 1210
Query: 436 -----QVLVCAPSNVAVDQLAEKIS----ATGLKVV-RLCAKSR-EAVSSPVEHLTLHYQ 484
++L+CAPSN A+D+L +I G +VV RL R EAV+ V +TL
Sbjct: 1211 DGPSARMLLCAPSNAAIDELVSRIKDGVDIDGKRVVPRLVRLGRDEAVNPAVRDVTLDAL 1270
Query: 485 VRHL---DTSEKSELHKLQQL----KDE-----------------------QGELSSSDE 514
H DT+ +LQ++ +D+ Q EL+ +
Sbjct: 1271 AEHAGSKDTAASRAAEELQRVERAWRDKRAELEQSASAPTSSTSRERTRALQAELNELTD 1330
Query: 515 KKYK---------------ALKRATEREISQ-----SADVICCTCVGAGDPRLANFRFRQ 554
K+++ +++ TER +++ A+++C T GAG L + F
Sbjct: 1331 KRFELREQVSSLQSRSKMGSMRPETERHMARMSILDEAEIVCATLAGAGHEMLYRYTFDT 1390
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
V+IDE+ QA E LIPL + +LVGD QL P ++ ++A R AQSLF R+
Sbjct: 1391 VVIDEAAQAVELSTLIPLRYECTRCILVGDPKQLPPTVLSQEAERRQYAQSLFVRM--FN 1448
Query: 615 LKPIR---LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV-----PNR 666
P R L +QYRMHP +S FPS +FY L +G + +S PW P R
Sbjct: 1449 ASPDRVHLLSIQYRMHPDISLFPSTAFYGRQLIDG----PQMASKTLQPWHNTQLFGPFR 1504
Query: 667 PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG--VVPSQIGVITPYEGQ--- 721
FF+V +E S N++EA ++ + ++G ++ Y+ Q
Sbjct: 1505 --FFHVDALEE--PGRSHSIQNQSEAYTAMQVYEALCACAQTSLRGRVGFVSMYKAQVDL 1560
Query: 722 -RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
R V+ R A+ +++ +SVD FQG+EKD IILSCVRSN+ + +GFL+D RR
Sbjct: 1561 LRTLFVSQYGRAAAM------DVDFSSVDGFQGQEKDIIILSCVRSNKDRVMGFLSDHRR 1614
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLV 821
LNVALTRAR ++++GN +L +W +++ + +V
Sbjct: 1615 LNVALTRARSNMIVIGNASMLGNDTIWRDMISEARSRGFVV 1655
>gi|326930440|ref|XP_003211355.1| PREDICTED: probable helicase senataxin-like [Meleagris gallopavo]
Length = 2717
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 258/551 (46%), Gaps = 114/551 (20%)
Query: 387 GLPELNASQVFAVKS----VLQRP----ISLIQGPPGTGKTVTSAAIVYHM--------- 429
+ E N Q A+++ V Q P I LI GPPGTGK+ T ++ +
Sbjct: 1963 SMSEYNEDQKRAIETAYAMVKQHPGLAKICLIHGPPGTGKSKTIVGLLSRVLSENTRTEK 2022
Query: 430 -----AKQGQGQVLVCAPSNVAVDQLAEKI----------------SATGLKVVRLCAKS 468
A+ Q + LVCAPSN AVD+L +KI + +K+VRL A+
Sbjct: 2023 TSKKNARMKQSRFLVCAPSNAAVDELMKKIIIAFKEKCQNKQEPLGNCGDIKLVRLGAE- 2081
Query: 469 REAVSSPVEHLTLHYQVRH-----------------------LDT-SEKSELHKL----- 499
+++S V +L QV H LD S + +H+
Sbjct: 2082 -RSINSEVRAFSLDKQVEHRMKRKPTDRDQDIQKKKAALDEKLDMLSRQRAMHRCEKRES 2140
Query: 500 QQLKDEQGELSSSDEKKYKALK------RATEREISQSADVICCTCVGAGDPRLANFRFR 553
Q L DE G LS ++ LK + + +I +D+ICCT +G L + +R
Sbjct: 2141 QMLDDEIGRLSKERQQLASQLKEVRGHSQKVQTDIILESDIICCTLSTSGGGLLESAFWR 2200
Query: 554 Q-------VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
Q V++DE+ Q+ E E LIPL+ ++VLVGD QL P I KA G QSL
Sbjct: 2201 QGLDPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSL 2260
Query: 607 FERL-----------VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
RL +L L ++L VQYRMHP + FPS+ Y TL+ E + S
Sbjct: 2261 MARLQRHLEDQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYVYGRTLKTDKATEENRCS 2320
Query: 656 GIDFPWPVPNRP-MFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF--LRSGVVPSQI 712
WP +P + F V G+EE S+ N E V +I+ T R + +I
Sbjct: 2321 S---EWPF--QPYLVFDVGDGREE--RDKDSFSNPQEVKLVLEIIRTIKEKRKDLGLRRI 2373
Query: 713 GVITPYEGQRAYIVNYMSRNGALRQQLYKEI---EVASVDSFQGREKDYIILSCVRSNEH 769
G+ITPY Q+ I + R ++K EV +VD+FQGREKD II++CVR+N
Sbjct: 2374 GIITPYSAQKKKIQEELDR-------VFKNNSPGEVDTVDAFQGREKDCIIVTCVRANSS 2426
Query: 770 QG-IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL 828
+G IGFL +RLNV +TRAR+ + ILG K L + WN L+ + +++ +
Sbjct: 2427 KGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDAQRRGAIIKTSDKSY 2486
Query: 829 KQSMVQFQKPK 839
K+ ++ K K
Sbjct: 2487 KKDALKILKLK 2497
>gi|67474564|ref|XP_653031.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56469949|gb|EAL47645.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 915
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 177/304 (58%), Gaps = 12/304 (3%)
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+C T + +F ++DE+ Q+ EPE L ++ ++ VL+GD QL P +
Sbjct: 571 VCSTLSLCTSSIMLKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDIQQLQPTCLS 629
Query: 595 KKAARAGLAQSLFERLVL-LGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 653
+A AG +S+FER + +K L+ QYRMHP++SEF + FY L+NGV+ +R
Sbjct: 630 TEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSSKDRF 689
Query: 654 SSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
+ I +P P+ F G E+ +SGTSY N E ++++V FL++ + ++IG
Sbjct: 690 DNRIINFFPDYTNPIMFINCDGTEQYGSSGTSYNNAGEVQIIQEVVEKFLKNKIKENEIG 749
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
+I+PY+ Q+ I Y+S +I+VA++D FQG EK+YII SCVRSN+ G+G
Sbjct: 750 IISPYQAQQELISQYVST----------KIKVANIDGFQGNEKEYIIFSCVRSNQTLGVG 799
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
F+ND +RLNVALTRA+ G++I+GN L +WN L+ H+ + L E + Q V
Sbjct: 800 FVNDYKRLNVALTRAKRGLIIIGNIPTLVTSKVWNMLIHHFYLKKALFELKGHKFVQYNV 859
Query: 834 QFQK 837
+ QK
Sbjct: 860 ENQK 863
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 382 RFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV---------YHMAKQ 432
++ P L LN Q A+ + L ISL+ GPPGTGKT + +I ++ +
Sbjct: 303 KYNIPNLSNLNDYQRKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKYRFYNINR 362
Query: 433 GQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
G+ ++LVCA SN AVD + K+ + VR+ A
Sbjct: 363 GEKKLLVCASSNNAVDVICSKLIEKDIPTVRVVA 396
>gi|255951120|ref|XP_002566327.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593344|emb|CAP99727.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 2167
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 249/527 (47%), Gaps = 100/527 (18%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ------------- 436
+N +Q A+KS + +LIQGPPG+GKT T A+V + G+
Sbjct: 1306 INRAQARAIKSAVDNDAFTLIQGPPGSGKTKTITALVGSLLSDVLGKQVVKVNGAPVARN 1365
Query: 437 -----VLVCAPSNVAVDQLAEKIS-------ATGLKVVRLCAKSREAVSSPVEHLTLHYQ 484
+L+CAPSN AVD+L ++ KV L +A+++ V +TL
Sbjct: 1366 ALSKKLLLCAPSNAAVDELVMRLKDGVKTTHGRQEKVSVLRLGRSDAINTKVLDVTLEEM 1425
Query: 485 V-----------------------RHLDTSEKSELHKLQQ------------------LK 503
V + DTS K +L + +K
Sbjct: 1426 VNARLNQDPSKGNGVDLQKLYEEHKTTDTSFKELRARLDEARAKGLPPPEELEREFDLMK 1485
Query: 504 DEQGELSSSDEK----------KYKALKRATEREISQSADVICCTCVGAGDP--RLANFR 551
++ +LS+S +K KR + +I + VIC T G+G + N
Sbjct: 1486 KKRSQLSTSIDKARDQNHTLARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQSMNVE 1545
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F V+IDE+ Q E LIPL G + VLVGD QL P ++ K A++ QSLF R+
Sbjct: 1546 FETVIIDEAAQCIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQ 1605
Query: 612 LLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQSSGIDFPWPVPNR- 666
+ + L VQYRMHP++S FPS +FY+G LQ+G T+ +R PW
Sbjct: 1606 KNHPQDVHLLDVQYRMHPAISHFPSVTFYDGKLQDGPDMATLRQR-------PWHQSELL 1658
Query: 667 -PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVITPYEGQR 722
P F+ G + G S +N E A + + T ++ +IG+ITPY+GQ
Sbjct: 1659 GPYRFFDVQGMHSSAVRGHSLVNYAELQVAMRLYDRLITDVKEYDFAGKIGIITPYKGQL 1718
Query: 723 AYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
+ N + R G + + ++++ + D+FQGRE + II SCVR++ ++GIGFL D RR+
Sbjct: 1719 RELKNQFTQRYG---EDILRKVDFNTTDAFQGRESEVIIFSCVRAS-NKGIGFLADIRRM 1774
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL 828
NV LTRA+ + +LGN + L + WNGL+ + +E EG + +
Sbjct: 1775 NVGLTRAKSSLWVLGNSQSLEQGQFWNGLIKNARERNVYTEGDIMKI 1821
>gi|340384719|ref|XP_003390858.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein-like [Amphimedon queenslandica]
Length = 1478
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 177/580 (30%), Positives = 262/580 (45%), Gaps = 95/580 (16%)
Query: 325 INHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQM-VRNTLP--- 380
+ VD W S S KT A+ +T + ++ + ++ + V N P
Sbjct: 903 LKEALRVDDNWSSLS--------KTIAISDTRSIDFNKFTVVKKQSKISLKVFNDNPLAK 954
Query: 381 RRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ------ 434
+ + G ELN Q ++K L LIQGPPGTGK+ T A + Y + +
Sbjct: 955 QLWKGEGGIELNPIQQDSIKRALTNSFQLIQGPPGTGKSETGAHLAYIFSLTNKEIFEED 1014
Query: 435 -----GQVLVCAPSNVAVD-------QLAEKISATGLKVVRLCAKSREAV--SSPVEHLT 480
VL C PSN +VD L EK+ + LK++R+ ++ E + S PV LT
Sbjct: 1015 PTSSFKSVLYCGPSNKSVDVVHKNLHLLNEKLGSKRLKILRIYGRTHERIDYSDPVFDLT 1074
Query: 481 ----------------------LHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK 518
LH +R ++ KLQ+L + SS++ K YK
Sbjct: 1075 QKRAEKDDNDGGLVLEEFRNESLHKIIRQNFPEIRTTETKLQKLLSQSIIPSSTERKNYK 1134
Query: 519 ALKRATER-EISQSADVICCTCVGAGDPRLANFR--FRQVLIDESTQATEPECLIPLVLG 575
+ ++E+ EI + DVI CTC RL N + Q +IDES ATEPE + L
Sbjct: 1135 DMITSSEKSEIQNNYDVILCTCNETCSRRLLNSKDILAQCIIDESGMATEPETIAASSL- 1193
Query: 576 AKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLK--------PIRLQVQYRMH 627
+ VVL+GDH QL PVI A GL SLFER + I L++QYRMH
Sbjct: 1194 CEHVVLIGDHKQLQPVIKYPPAKECGLGTSLFERYANQFERYAESEDSYLITLELQYRMH 1253
Query: 628 PSLSEFPSNSFYEGTLQNGVTINERQ--SSGIDFPWPVPNR-PMFFYVQMGQEEISAS-- 682
+ + PS FY L+ + ER+ + ID WP + P+ F G E+ + S
Sbjct: 1254 SFICQGPSGIFYNSKLKADQIVKERRPLTQSIDLFWPRGQQYPVLFLKVYGVEKFTDSKH 1313
Query: 683 -----GTSYLNRTEAANVEKIVTTF-LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALR 736
S N EA V K + + V I V+TPY Q+ I + + + L+
Sbjct: 1314 SKEIDSHSKCNEQEAKAVLKCIKKLVMNHNVKHESIAVLTPYGAQKNLITDMIKDDLELK 1373
Query: 737 QQLYKEIEVASVDSFQGREKDYIILSCVRSNE-----------------HQGIGFLNDPR 779
+K + VA++ QG E D +IL+ VRS + + +GFL D
Sbjct: 1374 P-YWKSLRVATIVESQGDEYDIVILTTVRSQKVSEIRYKEYIQPDRRWLTENLGFLTDDH 1432
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHEC 819
++NV +TRARYG++++GN K+L WN L+ Y++ C
Sbjct: 1433 QINVGITRARYGLILIGNDKLLRYDKTWNRLIKFYEDEGC 1472
>gi|66827407|ref|XP_647058.1| hypothetical protein DDB_G0268914 [Dictyostelium discoideum AX4]
gi|60475110|gb|EAL73046.1| hypothetical protein DDB_G0268914 [Dictyostelium discoideum AX4]
Length = 4540
Score = 211 bits (536), Expect = 2e-51, Method: Composition-based stats.
Identities = 156/473 (32%), Positives = 245/473 (51%), Gaps = 62/473 (13%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVT-SAAIVYHMAKQGQGQVLVCAPSNVAVD 448
LN SQ+ A+ +S++ I+LIQGPPGTGKT T ++ I +A ++LVC PS+ AVD
Sbjct: 3556 LNESQLAAINESLVHSSITLIQGPPGTGKTHTITSLISIILAINPDFKILVCGPSHAAVD 3615
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGE 508
++A+++ GL L + + + + V ++ D + +H +
Sbjct: 3616 EVAKRVIIKGL----LNDRGEKYIPTMV-------RIGLKDNIQDPIVHDICVFN----- 3659
Query: 509 LSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRL--ANFRFRQVLIDESTQATEP 566
+R E+++ IC + + A L ++F+ V++DE+TQ+ E
Sbjct: 3660 ------------RRLDEKKMILEHSSICFSTLSASGSNLVQSSFKPNVVIVDEATQSCET 3707
Query: 567 ECLIPLVLGAK---QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQ 623
C+IPL LGAK +++LVGD QL P I K++ GL SLFERL + L L VQ
Sbjct: 3708 SCIIPLSLGAKSMKKLILVGDPVQLPPTIFSKESIHCGLGISLFERLSKV-LPVSMLNVQ 3766
Query: 624 YRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM----FFYVQMGQEEI 679
YRMHP +S+FPS+ FY L++G + + + F N+ FF V +EE
Sbjct: 3767 YRMHPLISKFPSSQFYHDILKDGDNVVSSDAYSLRFH---ENQDYGAIRFFDVTDSREE- 3822
Query: 680 SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ--IGVITPYEGQRAYIVNYMSRNGALRQ 737
TS N+ E V ++ + Q G++TPY+ QR I + A +Q
Sbjct: 3823 -RGKTSIKNQLEITMVFTLIKKLTQDHPETKQYSFGIVTPYKLQRKEIED------AYKQ 3875
Query: 738 -QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILG 796
L IE+ ++DSFQG EKD +I+SCVR+ + IGFL+D RR+NV++TRA+YG+ I+G
Sbjct: 3876 LNLSLNIEIKTIDSFQGSEKDIMIMSCVRN---ESIGFLSDRRRINVSITRAKYGLFIIG 3932
Query: 797 NPKVLSKQPLWNGLLTHYKEHE---CLVEGPLNNLKQSMVQFQ--KPKKIYND 844
N +L W L+ H + + + NL++ +QF P+ + D
Sbjct: 3933 NATLLKLDRTWGELIDHLISIDRVYSINSNDIENLREQTIQFDLINPQGLITD 3985
>gi|32471647|ref|NP_864640.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH 1]
gi|32397018|emb|CAD72321.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH 1]
Length = 763
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 237/458 (51%), Gaps = 48/458 (10%)
Query: 390 ELNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
ELN Q AV +++ +++I GPPGTGKT T A I+ ++G+ +VL CA SN AVD
Sbjct: 310 ELNPPQRDAVAFAMMADDVAIIHGPPGTGKTTTIAEIIAQSVERGE-RVLACAASNTAVD 368
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE--KSELHKLQQL---- 502
L E++ VVR+ +R V ++ TL V TS K +L Q+
Sbjct: 369 NLLERLVRLMPNVVRVGHPAR--VFESLQEHTLDALVESDPTSTVIKDLRRELDQILREA 426
Query: 503 -----------KDEQGELSSSDEKKYKALKRATEREISQS----ADVICCTCVGAGDPRL 547
+ ++ EL + + + + + R+ ER I ++ ADVIC T + L
Sbjct: 427 NRPIREGGGRERKQRAELFN-EAGRLRGMIRSQERSIVRAVIDRADVICTTTT-IDEELL 484
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
++ F V++DES Q TEP + +L A +++L GDHCQL P ++ AAR G+ SL
Sbjct: 485 SDQSFDLVVVDESCQCTEP-GMWQAILRADRLILAGDHCQLPPTVLSDDAARIGMRDSLM 543
Query: 608 ERLVLLGLKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
+RLV + I RL VQYRM+ S+ F S+ FY+GTL ++ ++ D P N
Sbjct: 544 QRLVHRYGEKIYRRLTVQYRMNESIMRFSSDHFYDGTLIADASV--KRHLLCDLPNVEEN 601
Query: 666 ----RPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
P+ G +EE+ G S LN EA + ++V GV QI VI PY
Sbjct: 602 DFTSEPLLLIDTAGAGYEEELEPDGQSKLNHGEAKVILQLVKQLADLGVTGDQIAVIAPY 661
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q RN +R L IE+ +VD FQGREK+ ++++ RSN IGFL+D
Sbjct: 662 AAQ--------VRNLRMRLDL-DGIEIDTVDGFQGREKEVVLITMTRSNPDGEIGFLSDQ 712
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
RR NVALTRA+ ++++G+ L ++ L ++++
Sbjct: 713 RRSNVALTRAKRKLIVVGDSATLCNHEFYSELFGYFED 750
>gi|293357555|ref|XP_227717.5| PREDICTED: uncharacterized protein LOC310880 [Rattus norvegicus]
Length = 1873
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 235/432 (54%), Gaps = 38/432 (8%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + + ++L+ + +NVAVD++
Sbjct: 1419 PITVIHGVFGAGKSYLLAVVILFLVELFEKCDSEAVGRARPWKLLISSSTNVAVDRVLLG 1478
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G K +R+ S ++ PV L Y + +E +L +L L E EL+
Sbjct: 1479 LLSLGFEKFIRV--GSVRKIAKPV----LPYSLHASSDNESEQLKELHALMRE--ELTPI 1530
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T R + + A V+ TC P + + +F V++DE +Q TEP
Sbjct: 1531 ERVYVRKSIEQHKLGTNRVLLKQARVVGITCAACPFPCMNDLKFPVVVLDECSQMTEPAS 1590
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KPI+L+ QYR
Sbjct: 1591 LLPIARFECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRLCLMGHKPIQLRTQYRC 1650
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP +S ++ FYEG L NG I+ER+ S + W +P + FY G E++ S+
Sbjct: 1651 HPVISAIANDLFYEGNLVNG--ISERERSPV-LEW-LPT--LCFYNVTGTEQVEREN-SF 1703
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
+N EAA K++ + + SG+ S IGVIT Y+ Q I + +S + K +EV+
Sbjct: 1704 VNVAEAAFTLKLIRSLIASGLEGSMIGVITLYKSQMYKICSLLSAVDVDHPDV-KAVEVS 1762
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR R ++I+G+ L K L
Sbjct: 1763 TVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIIGSLSCLRKNQL 1819
Query: 807 WNGLLTHYKEHE 818
W ++ H K E
Sbjct: 1820 WGRVIQHCKGRE 1831
>gi|402075170|gb|EJT70641.1| DNA-binding protein SMUBP-2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 2075
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 216/716 (30%), Positives = 313/716 (43%), Gaps = 147/716 (20%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHM-----------------AK 431
+LN Q A+ + + +L+QGPPGTGKT T A+V +
Sbjct: 1340 QLNKGQASAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGNIKINKPPPVPVRPGV 1399
Query: 432 QGQG----QVLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAVSSPVE 477
G+ ++LVCAPSN AVD+L ++ A G+K V+RL +AV+ V+
Sbjct: 1400 NGEAPMARKLLVCAPSNAAVDELVLRLKA-GIKDTNGQMHKINVLRL--GRSDAVNQAVK 1456
Query: 478 HLTLHYQVRH------------------------------------LDTSEKS----ELH 497
+TL V+ L+++ +S +L+
Sbjct: 1457 DVTLDELVKEKMDALAGQNAGQPSDREKMHQEAGEIKAKMMPLRAALESARESNDIGQLN 1516
Query: 498 KLQQ----LKDEQGELSSSDEKKY----------KALKRATEREISQSADVICCTCVGAG 543
LQ+ LK Q +L S +++ + +R ++ I A V+C T G+G
Sbjct: 1517 NLQREFDVLKRRQMQLGSMIDREKSSGNTYAREAEVKRRGIQQSILADAHVLCATLSGSG 1576
Query: 544 DPRLANFR--FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
+ F V+IDE+ Q E LIPL GA + VLVGD QL P ++ + AAR G
Sbjct: 1577 HDMFKTLQVEFETVIIDEAAQCVELSALIPLKYGASKCVLVGDPKQLPPTVLSQSAARYG 1636
Query: 602 LAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINE-RQSSGIDF 659
QSLF R+ + L QYRMHP +S FPS FYEG L +G + + RQ +
Sbjct: 1637 YDQSLFVRMQQNHPTKVHLLDCQYRMHPEISLFPSKEFYEGRLADGDDMAKLRQQPWHEN 1696
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL-----RSGVVPSQIGV 714
P P R FF V+ G +E G S +N E + +I F R G + +IG+
Sbjct: 1697 PLLGPYR--FFDVE-GIQERGNRGQSLVNTNEVSVALQIFNRFSTDFSSRCGDLKGKIGI 1753
Query: 715 ITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+ Q A ++ R G + + ++IE + D+FQGRE + II SCVR++ GIG
Sbjct: 1754 ITPYKAQLHALRQRFLDRYG---EAVLEQIEFNTTDAFQGRECEIIIFSCVRASPTGGIG 1810
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
F+ D RR+NV LTRAR + +LG+ + L + P W L+ K + G + M
Sbjct: 1811 FMTDIRRMNVGLTRARSSLWVLGDSRALKQGPFWAKLIEDAKARDRYTSGSI------MA 1864
Query: 834 QFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGS-------------RARGYMPP 880
Q + R + GA P P+ S P RR S RAR
Sbjct: 1865 QL---RSAATSRPMPMGAVPMQAPS--SNGPPTMQRRDSERSDIEMLDVNDARARAAQSL 1919
Query: 881 GPPNGTHKP-GLHPAGFPMPRVPLPPFQGGPPSQPYA-IPSRGAVHGPVGAVHHVPPPGS 938
+GTH+ G AG P P PP Q A +R PV + P
Sbjct: 1920 PTNDGTHQTQGQGHAGMTGP--PPRALSSAPPIQSSAGRNARSMASSPV--IQSSAP--- 1972
Query: 939 RGFGAGRGSAGAPIGSHLQHQQNTQQPIGTIGSTFNFPSLENSNSQPSVGGPLTQP 994
RG AG + + ++ Q+ G + ST S N + QP GG +P
Sbjct: 1973 ------RGPAGDTVIA--SRKRPAQEDGGDMSSTAK-RSATNPHHQPQHGGASARP 2019
>gi|340381252|ref|XP_003389135.1| PREDICTED: hypothetical protein LOC100632129, partial [Amphimedon
queenslandica]
Length = 3316
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 172/564 (30%), Positives = 261/564 (46%), Gaps = 87/564 (15%)
Query: 341 DRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQM-VRNTLP---RRFGAPGLPELNASQV 396
D KT AV +T + ++ + ++ + V N P + + G ELN Q
Sbjct: 2749 DNWSSLSKTIAVSDTRSIDFNKFTVVKKQSKISLKVFNNNPLAKQLWKGEGGIELNPIQQ 2808
Query: 397 FAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ-----------GQVLVCAPSNV 445
++K L+ LIQGPPGTGK+ T A + Y + + VL C PSN
Sbjct: 2809 DSIKRALRNRFQLIQGPPGTGKSETGAHLAYIFSITNKEISKEDPTSFFKSVLYCGPSNK 2868
Query: 446 AVD-------QLAEKISATGLKVVRLCAKSREAVSSP----------------------- 475
+VD L EK+ + LK++R+ ++ E + P
Sbjct: 2869 SVDVVHKNLHLLNEKLGSKKLKILRIYGRTHERMDCPDPVFVLTQERAERDDNDGGRVLE 2928
Query: 476 -VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATE-REISQSAD 533
+ +LH +R ++ KLQ+L + SS++ K YK + ++E REI + D
Sbjct: 2929 EFRNESLHIIIRQNFPEIRATETKLQKLLSQSIIPSSTERKNYKDMITSSEKREIQNNYD 2988
Query: 534 VICCTCVGAGDPRLANFR--FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
VI CTC RL + + Q +IDES ATEPE + L + VVL+GDH QL PV
Sbjct: 2989 VILCTCNETCSQRLLSSKDILAQCIIDESGMATEPETIAASSL-CEHVVLIGDHKQLQPV 3047
Query: 592 IMCKKAARAGLAQSLFERLV------LLGLKP--IRLQVQYRMHPSLSEFPSNSFYEGTL 643
I A GL SLFER P I L++QYRMH + + PS+ FY L
Sbjct: 3048 IKYPPAKECGLGTSLFERYANQFERCAESQDPYLITLELQYRMHSFICQGPSSIFYNSKL 3107
Query: 644 QNGVTINERQ--SSGIDFPWPVPNR-PMFFYVQMGQEEISAS-------GTSYLNRTEAA 693
+ + ER+ + ID W + P+ F G E+ + S S N EA
Sbjct: 3108 KADQIVKERRPLTQSIDLFWSRGQQYPVLFLKVYGVEKFTDSKYSKKVDSHSKCNEQEAK 3167
Query: 694 NVEKIVTTFLRSGVVPSQ-IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQ 752
V K +T + + V + I V+TPY Q+ +V+ M +N + + +K + VA++ Q
Sbjct: 3168 AVLKYITKLVMNHDVEHESIAVLTPYGAQKNLVVD-MIKNDPVLKTKWKSLRVATIVESQ 3226
Query: 753 GREKDYIILSCVRSNE-----------------HQGIGFLNDPRRLNVALTRARYGIVIL 795
G E D +IL+ VRS + + +GFL D ++NV +TRARYG++I+
Sbjct: 3227 GDEYDIVILTTVRSQKLSEISHKEYIQPDRRWLTENLGFLTDDHQINVGITRARYGLIII 3286
Query: 796 GNPKVLSKQPLWNGLLTHYKEHEC 819
GN ++L WN L+ Y++ C
Sbjct: 3287 GNDRLLRYDKTWNRLIKFYEDKGC 3310
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 131/527 (24%), Positives = 216/527 (40%), Gaps = 92/527 (17%)
Query: 313 LELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEV 372
L L + GV + N +V F+ K + FDR+ A+ + +V + + H V
Sbjct: 1082 LGLTTNPGVKQESN--VNVTFILKYSYFDRLHRALDSLP---PAVLNRLMPNDPCHFSNV 1136
Query: 373 QMVRNTLPRRFGAPGLPELNASQVFAVKSVL-----QRPISLIQGPPGTGKTVTSAAIVY 427
+ +P + +L SQ A+KS++ + P+ LI G GTGKT A Y
Sbjct: 1137 VLNDEDIPPIKCVRDIVKLEYSQRKALKSIMSCEANKAPV-LIIGSFGTGKTQLLARAAY 1195
Query: 428 HMAKQG-QGQVLVCAPSNVAVDQLA----EKISATGL---KVVRLCAKSREAVSSPVEHL 479
+ +Q + ++L+CA + D K+ +G KVVRL SS VE+
Sbjct: 1196 QVLQQNRKNRILICAHHQRSADTFMANYFSKMIDSGWRCGKVVRLVPMEYHPPSSCVEYY 1255
Query: 480 TLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 539
++ S +E + +L T S S +++
Sbjct: 1256 VTITDIK-----------------------CSRNELQNISLIVTT---FSSSLNLLGVVP 1289
Query: 540 VGAGDPRLANFRFRQVLIDESTQATEPECLIPLVL--GAKQVVLVGDHCQLGP--VIMCK 595
G F +L+DE Q EPE + PL L G Q+V+ GDH Q+GP +++ +
Sbjct: 1290 KGF---------FSHILLDEGAQTREPESVAPLCLADGNTQIVIAGDHKQVGPSLLVLGE 1340
Query: 596 KAARAGLAQSLFERLVLL----------GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQN 645
A + GL+ SL ERL L + L +R H ++ PS FY+ L
Sbjct: 1341 LAIKNGLSLSLLERLHTLYNDDRLSDASSVHSATLLTNFRCHHAILSLPSYLFYDSAL-- 1398
Query: 646 GVTINERQSSGIDFPWPVPNRPMFFYVQMGQE--EISASGTSYLNRTEAANVEKIVTTFL 703
+T E + P P+ F E E+ ++ + R + K V ++
Sbjct: 1399 -ITAAE----AVTHLHPEAKYPLHFICSDLSEAKEVHSNTDEFEVRLLLQELSKYVKSWP 1453
Query: 704 RS--GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
+ S+I V+T Q+ ++ +S + +++I+V +V QG E + I L
Sbjct: 1454 NQWGKMDLSKICVMTTTAHQKIRVIQVLSYDYL----NFEDIDVRTVFDIQGCEYEAIFL 1509
Query: 762 SCVRSNEHQGIGFLNDPRR-------LNVALTRARYGIVILGNPKVL 801
S +G +P + N ALTRA+ +V GNP +L
Sbjct: 1510 STAEPTTREGKS--KNPTKTPCSQYVFNTALTRAKSLVVCAGNPFLL 1554
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 167/451 (37%), Gaps = 64/451 (14%)
Query: 552 FRQVLIDESTQATEPECLIPLVLGAK--QVVLVGDHCQLGPVIMC--KKAARAGLAQSLF 607
F +LIDE Q EPE L P ++ K ++V+ GDH Q+GP I+ K + GL SL
Sbjct: 338 FTHILIDEGAQTREPEALSPFLMANKNTRIVIAGDHQQVGPQILVLGKAPQQFGLCVSLL 397
Query: 608 ERLVLLGLKPI---------RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+RL L K I + YR + E PS FY L R +
Sbjct: 398 QRL-LEKYKSIGDITKRNTPSWNINYRSQADILELPSKLFYNSEL--------RACGRVP 448
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
+ P P F +I + ++ + +S + ++TP
Sbjct: 449 YHLKAP-YPYVFICSSFTNDIPVDAQCAVEADRLLQAVQLHSDKFKSWDL-KDTCIMTPS 506
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF---- 774
Q N + + + + + V + QG+E + +S V S E G F
Sbjct: 507 LKQ----ANLIKKLIRTKFNNLEGVNVITSYQMQGQEYRMLFMSTVESLEPNGRPFDPLK 562
Query: 775 -LNDPRRLNVALTRARYGIVILGNPKVL--------SKQPLWNGLLTHYKEHECLVEGPL 825
+P N A+TR++ +V +GNP VL + + W ++ ++E P
Sbjct: 563 SFCNPALFNTAITRSKSLVVAVGNPLVLLLSEATMDNLKWCWREFISRCLKYETFKSTPS 622
Query: 826 N--NLKQSMVQFQKPKKIYNDR---RLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPP 880
+ +Q VQF K N +LF G S +A MPP
Sbjct: 623 DRAQFEQVKVQFFDMLKCDNTTDVIKLFQKNG-------YSQDCITKASLLPKAPVLMPP 675
Query: 881 GPPNGTH---KPGLHPAGFPMPRVPLPPFQG--GPPSQP-YAIPSRGAVHGPVGAVHHVP 934
P+ H + +G P P V P Q P SQ IP + P +H +P
Sbjct: 676 TTPSKMHSAQQSSGWSSGTP-PSVSYQPTQDRKQPSSQANQDIPFQNEAAQPWPQLHLLP 734
Query: 935 PPGSRGFGAGRGSAGAPIGSHLQHQQNTQQP 965
P + + A +P + + QQP
Sbjct: 735 SPSE----SKKQLASSPQEAKMHQSPTKQQP 761
>gi|219129129|ref|XP_002184749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403858|gb|EEC43808.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 268
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/273 (44%), Positives = 161/273 (58%), Gaps = 6/273 (2%)
Query: 532 ADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
A VICCTC+G+G L F +VL+DE+TQATEP L+PL+ G +Q+VLVGDHCQL P
Sbjct: 1 AQVICCTCIGSGGDILDAMTFDRVLLDEATQATEPAVLVPLMRGCRQLVLVGDHCQLPPT 60
Query: 592 IMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE 651
++ +A G LF R+V G+ P L QYRMHP ++ FPS+ FY G L+NGV+ E
Sbjct: 61 VLSTRAEEEGHGVPLFSRMVACGVPPYMLDTQYRMHPCIAMFPSDLFYGGLLRNGVSAPE 120
Query: 652 RQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG-VVPS 710
R+ FPWP P+ F G E G S N EAA V+ L+ G S
Sbjct: 121 RRPLA-GFPWPREEFPVAFLPIQGVE--MDDGVSKYNDAEAAAACNAVSLLLQGGQCSAS 177
Query: 711 QIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
I V+TPY Q I + R + IEVASVD FQGREK+ ++ S VRSN++
Sbjct: 178 DIAVVTPYAAQARLIRRMIRRILPDSGPPF--IEVASVDGFQGREKEAVVFSAVRSNDYG 235
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
IGF +D RR+NV+ TRAR ++++GN L +
Sbjct: 236 SIGFTSDWRRVNVSFTRARRALIVIGNEHTLRR 268
>gi|340346996|ref|ZP_08670112.1| DNA helicase [Prevotella dentalis DSM 3688]
gi|433652214|ref|YP_007278593.1| hypothetical protein Prede_1241 [Prevotella dentalis DSM 3688]
gi|339610499|gb|EGQ15349.1| DNA helicase [Prevotella dentalis DSM 3688]
gi|433302747|gb|AGB28563.1| hypothetical protein Prede_1241 [Prevotella dentalis DSM 3688]
Length = 675
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 245/480 (51%), Gaps = 57/480 (11%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F P LN +Q AV VL+ + + ++ GPPGTGKT T + + + QVLVCA
Sbjct: 201 FAPMSFPWLNVTQERAVNEVLRAKDVEVVHGPPGTGKTTTLVEAINETLMR-ESQVLVCA 259
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++EK+ G+ V+R+ +R V+ + L Y+ R H D + + K
Sbjct: 260 QSNMAVDWISEKLVDRGINVLRIGNPTR--VNDKM--LGFTYERRFEAHPDYPQLWAIRK 315
Query: 499 -LQQLKDEQGELSSSDEKKYKALK-RATEREISQSAD------VICCTCVGAGDPRLANF 550
+++L+ ++ S +K + LK RATE EI +A+ VI T VGA L
Sbjct: 316 AIRELRKKRKGRDESYHQKMERLKSRATELEIRINAELFGEARVIASTLVGADSRLLEGQ 375
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
+F + IDE+ QA E C IP + +VVL GDHCQL P + A +AGL ++L ER+
Sbjct: 376 KFSTLFIDEAAQALEAACWIP-IRRVSRVVLAGDHCQLPPTVKSIAAMKAGLGKTLMERI 434
Query: 611 VLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID--FPW---- 661
V KP LQVQYRM + F S FY G ++ R ++ F W
Sbjct: 435 V--EQKPECVTLLQVQYRMREEIMHFSSEWFYGGRVETAPQAKHRGILDLENPFTWIDTA 492
Query: 662 PVPNRPMFFYVQMGQEEISAS-----------------GTSY--LNRTEA-ANVEKIVTT 701
P P Q+ + I S G SY +NR EA ++ +
Sbjct: 493 PPQLSPAGEVEQVPHKNIGDSLLPEGLGKASDFSEQFVGESYGRVNRGEAFLTLDALQDY 552
Query: 702 FLRSG---VVPSQI--GVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGRE 755
F++ G ++ +I GVI+PY Q Y+ + R + Y+ I V +VD FQG+E
Sbjct: 553 FVKIGRQRILDEKIDVGVISPYRAQVQYLRQLIKRREFFKP--YRHLISVNTVDGFQGQE 610
Query: 756 KDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+D I++S VR+N+ IGFL D RR+NVA+TRAR ++ILGN L++ P + L T+ K
Sbjct: 611 RDIILVSMVRANDQGQIGFLCDLRRMNVAITRARMKLIILGNAPTLTRHPFYKRLYTYAK 670
>gi|327312657|ref|YP_004328094.1| hypothetical protein HMPREF9137_0361 [Prevotella denticola F0289]
gi|326944641|gb|AEA20526.1| conserved hypothetical protein [Prevotella denticola F0289]
Length = 639
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 240/476 (50%), Gaps = 64/476 (13%)
Query: 388 LPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVA 446
LP LN +Q AV VL + ++++ GPPGTGKT T + + + QVLVCA SN+A
Sbjct: 175 LPWLNPAQERAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMR-ESQVLVCAQSNMA 233
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSELHK-LQQLKD 504
VD ++EK+ G+ V+R+ +R V+ + T + H D + + K +++L++
Sbjct: 234 VDWISEKLIDRGINVLRIGNPTR--VNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELRN 291
Query: 505 EQGELSSSDEKKYKALK-RATEREIS------QSADVICCTCVGAGDPRLANFRFRQVLI 557
+ S S +K LK RATE EI A VI T VGAG + +F + I
Sbjct: 292 NRKRGSESYHQKMDRLKSRATELEIRIHTSLFGEARVIASTLVGAGSRVMEGQKFTTLFI 351
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP 617
DE+ QA E C I + A +V+L GDHCQL P + A R GL ++L ER+V KP
Sbjct: 352 DEAAQALEAACWIA-IRRASRVILAGDHCQLPPTVKSIAALRGGLGKTLMERIV--ENKP 408
Query: 618 ---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--W----------- 661
L+VQYRM+ + F S+ FY G ++ I R D P W
Sbjct: 409 EVVTLLKVQYRMNEEIMRFSSDWFYGGQVEAAPQIKYRGILDYDNPMVWIDTSDDTMTAA 468
Query: 662 --------------PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL---- 703
V ++ F+ E+ S +N+ EA K + +
Sbjct: 469 SGSTASEGNQTSVPSVEDKEASFH-----EQFVGSSFGRINKGEAELTLKTLKDYFTKIG 523
Query: 704 RSGVVPSQI--GVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYII 760
R V+ +I G+I+PY Q Y+ + + + + Y+ + V +VD FQG+E+D I+
Sbjct: 524 RQRVLDERIDVGIISPYRAQVQYLRSLIKKREFFKP--YRSLVSVNTVDGFQGQERDVIL 581
Query: 761 LSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP----LWNGLLT 812
+S VRSNE IGFL D RR+NVA+TRAR ++ILGN + +++ P LW+ L T
Sbjct: 582 ISLVRSNEEGQIGFLRDLRRMNVAITRARMKLIILGNVRTMTRHPFYKKLWDSLST 637
>gi|197124729|ref|YP_002136680.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. K]
gi|196174578|gb|ACG75551.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. K]
Length = 622
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 221/436 (50%), Gaps = 48/436 (11%)
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
++L+ GPPGTGKT ++ A +G+ VL APSN+AVD L E+++A GL VR+
Sbjct: 197 LALVHGPPGTGKTTVLVEVIRRAAARGE-SVLAAAPSNLAVDNLVERLAAAGLACVRVGH 255
Query: 467 KSREAVSSPVEHLTLHYQVRHLDTSE------------KSELHKLQQLKDEQGELSSSDE 514
+R + +EH TL +V + + + + K +Q K G S+S E
Sbjct: 256 PAR-VLPGLLEH-TLEARVEAHEAARIAQGLVDQALALRRDARKRRQ-KRGPGRFSASRE 312
Query: 515 KKYKA---------LKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATE 565
++ +A L+ E E+ + A V+ T P LA RF ++DE+TQA E
Sbjct: 313 QEREARALLAEARRLEARAEAEVLERAQVVLATLTSLDGPALAGRRFALAVLDEATQAVE 372
Query: 566 PECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQV--Q 623
P + L L A + VL GDH QL P ++ A GL SLFERLV R+ + Q
Sbjct: 373 PAAYLAL-LRADRAVLAGDHLQLPPTVLSAAAQEGGLGVSLFERLVEAHGDRARVMLAEQ 431
Query: 624 YRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASG 683
+RM+ + FPS + Y G L+ R D P+ + + + +EE
Sbjct: 432 HRMNARIMAFPSEALYGGALRAHPAAAGRAID--DAPFELVDTSGRGF----EEETPEGS 485
Query: 684 TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S N EA V L +G+ P + VI+PY+ Q + R LRQ L +E+
Sbjct: 486 DSKQNTGEAELAAAEVRRLLAAGLAPGDVAVISPYDAQ-------VQR---LRQLLAEEV 535
Query: 744 E----VASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 799
E V +VD FQGREK+ +++S VRSNE +GFL D RR+NVALTRAR +V++G+
Sbjct: 536 EAGLEVDTVDGFQGREKEAVVVSLVRSNEAGEVGFLADVRRMNVALTRARAKLVVVGDGS 595
Query: 800 VLSKQPLWNGLLTHYK 815
+S+ P + L H +
Sbjct: 596 TVSRHPFYRSFLEHAE 611
>gi|392339073|ref|XP_003753720.1| PREDICTED: uncharacterized protein LOC310880 [Rattus norvegicus]
Length = 1819
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 235/432 (54%), Gaps = 38/432 (8%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + + ++L+ + +NVAVD++
Sbjct: 1365 PITVIHGVFGAGKSYLLAVVILFLVELFEKCDSEAVGRARPWKLLISSSTNVAVDRVLLG 1424
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G K +R+ S ++ PV L Y + +E +L +L L E EL+
Sbjct: 1425 LLSLGFEKFIRV--GSVRKIAKPV----LPYSLHASSDNESEQLKELHALMRE--ELTPI 1476
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T R + + A V+ TC P + + +F V++DE +Q TEP
Sbjct: 1477 ERVYVRKSIEQHKLGTNRVLLKQARVVGITCAACPFPCMNDLKFPVVVLDECSQMTEPAS 1536
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KPI+L+ QYR
Sbjct: 1537 LLPIARFECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRLCLMGHKPIQLRTQYRC 1596
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP +S ++ FYEG L NG I+ER+ S + W +P + FY G E++ S+
Sbjct: 1597 HPVISAIANDLFYEGNLVNG--ISERERSPV-LEW-LPT--LCFYNVTGTEQVEREN-SF 1649
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
+N EAA K++ + + SG+ S IGVIT Y+ Q I + +S + K +EV+
Sbjct: 1650 VNVAEAAFTLKLIRSLIASGLEGSMIGVITLYKSQMYKICSLLSAVDVDHPDV-KAVEVS 1708
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR R ++I+G+ L K L
Sbjct: 1709 TVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIIGSLSCLRKNQL 1765
Query: 807 WNGLLTHYKEHE 818
W ++ H K E
Sbjct: 1766 WGRVIQHCKGRE 1777
>gi|322709665|gb|EFZ01241.1| putative SEN1 protein [Metarhizium anisopliae ARSEF 23]
Length = 2049
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 198/647 (30%), Positives = 285/647 (44%), Gaps = 135/647 (20%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQ----------------- 432
LN Q AV +LIQGPPGTGKT T A+V + +
Sbjct: 1321 LNHGQAVAVLGAQDNDGFTLIQGPPGTGKTKTITAMVGSLLSEQLAQASNGVPMGAPLRP 1380
Query: 433 -------GQG---QVLVCAPSNVAVDQLAEKI-----SATG----LKVVRLCAKSREAVS 473
GQG ++LVCAPSN AVD+L ++ +++G + V+RL +A++
Sbjct: 1381 LAGAIPAGQGRPKKLLVCAPSNAAVDELVLRLKSGVKTSSGKTKPINVLRLGRS--DAIN 1438
Query: 474 SPVEHLTLHYQVR-------------------HLDTSE-KSELHKLQQLKDE-------- 505
+ V+ +TL VR H D ++ + EL +++QL DE
Sbjct: 1439 AAVKDVTLDELVRNRMEGDNTKDKAKAERDKLHGDAAKIREELAEIRQLLDEARAQDNRI 1498
Query: 506 -QGELSSS-DEKKYKAL-----------------------KRATEREISQSADVICCTCV 540
Q LS DE K + + +R ++EI SA V+C T
Sbjct: 1499 TQNTLSRKFDELKRQQMNIGKQIDANKDSGNSLAREMEMRRRQVQQEILNSAHVLCATLS 1558
Query: 541 GAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
G+G N F V+IDE+ Q E LIPL G + +LVGD QL P ++ + AA
Sbjct: 1559 GSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSAA 1618
Query: 599 RAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
R G QSLF R+ K + L +QYRMHP +S FPS FYEG LQ+G + + +
Sbjct: 1619 RFGYDQSLFVRMQQNHPKSVHLLDMQYRMHPEISMFPSKEFYEGQLQDGQDMLQLRHQ-- 1676
Query: 658 DFPW--PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF---LRSGVVPSQI 712
PW P F+ G +E G S +N E ++ F + + +I
Sbjct: 1677 --PWHQSALLGPYRFFDVEGVQEKGRKGQSLVNTRELQVAMEMYDRFSKEYKQCDLTGKI 1734
Query: 713 GVITPYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
G+ITPY+ Q + N + SR G + + IE + D+FQGRE + II SCVR++ G
Sbjct: 1735 GIITPYKAQLFELRNRFTSRYG---ENITDIIEFNTTDAFQGRECEIIIFSCVRASSTGG 1791
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG-------- 823
IGF+ D RR+NV LTRA+ + ILG+ + L + W L+ K + +G
Sbjct: 1792 IGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAKARDRYTKGDILGMFRQ 1851
Query: 824 PLNNLKQSMVQF---QKPKKI----------YNDRRLFFGAGPGIVPNDI-STSNPNADR 869
PL S Q + PK I D +GP +D+ + SN N R
Sbjct: 1852 PLRRASPSTYQAPQKESPKDIEMLDSPVAKPIMDGVKNIKSGPS---SDLPALSNENQSR 1908
Query: 870 RGSRARGYMPPGPPNGTHKPGLHPAGFPMPRVPLPPFQGGPPSQPYA 916
+ + G +P P G P +H + P G P Q A
Sbjct: 1909 KTT--DGSIPNVVPRGAGLPVIHTSDNQASEPKKRPLDGSEPGQQAA 1953
>gi|326505658|dbj|BAJ95500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 230/449 (51%), Gaps = 32/449 (7%)
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ L+ R + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 200 LDDSQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKRG-AKILACAASNIAVDN 258
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 502
+ E++S K+VRL +R + + S ++ L L + E+ KL +
Sbjct: 259 IVERLSQYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKLLKA 318
Query: 503 KDE------QGELSS--SDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
KD + EL + +E+K + L A ++ ++ADV+ T GA ++A F
Sbjct: 319 KDRNTKRDIRKELKTLAKEERKRQQLAVA---DVIKNADVVLSTLTGASSKKIAGISFDL 375
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
V+IDE+ QA E C I L+ GA+ VL GDH QL P I +A + G+ ++LFERL
Sbjct: 376 VIIDEAAQALEVACWIALLKGAR-CVLAGDHLQLPPTIQSVEAEKKGMGKTLFERLTEGY 434
Query: 615 LKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID-FPWPVPNRPMFFY 671
I L VQYRMH + + S Y ++ ++ ++ P
Sbjct: 435 GDEITSMLTVQYRMHELIMNWSSKELYSNKIKAHSSVAGHMLYDLEGVNKSSSTEPTIIL 494
Query: 672 VQM---GQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNY 728
V EE+ S +N EAA + SGV S IG+ITPY Q +
Sbjct: 495 VDTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVRASDIGIITPYSAQVTCL--K 552
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
M RN + K++E+++VD FQGREK+ II+S VRSN+ + +GFL+D RR+NVA+TRA
Sbjct: 553 MMRN---KDAKLKDLEISTVDGFQGREKEAIIISMVRSNQKKEVGFLSDHRRMNVAVTRA 609
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R ++ + + +S L+ +++E+
Sbjct: 610 RRQCCVVCDAETVSSDRFLKRLVEYFEEN 638
>gi|317037841|ref|XP_001402440.2| DNA helicase [Aspergillus niger CBS 513.88]
Length = 714
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 236/467 (50%), Gaps = 65/467 (13%)
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R I+LI GPPGTGKT T ++ M ++ Q +VLVC PSN++V
Sbjct: 234 PTLNDSQKEAIRFALAAREIALIHGPPGTGKTHTLIELIVQMVQRKQ-RVLVCGPSNISV 292
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + VVR+ +R E ++ E + VR +++ +
Sbjct: 293 DNIVERLAPKKVPVVRIGHPARLLPSVLDHSLEVLTHTSEAAAIVRDVRKEIDQKQASIR 352
Query: 498 KLQQLKDEQG---ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + +L + + + E + +S+ V+ T GAG +L N +F
Sbjct: 353 KTRAARERRAIYDDLRELRREFRERENKCVENLVRESS-VVLATLHGAGGHQLKNQKFDV 411
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA---------------- 598
V+IDE++QA E +C IPL L A +VVL GDH QL P + K
Sbjct: 412 VIIDEASQALEAQCWIPL-LSASKVVLAGDHLQLPPTVKSTKENAKKAAKEKEDKKENGE 470
Query: 599 ---RAGLAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
L +LF+RL+ + G+K + L QYRMH + +FPS+ Y+ L ++ +R
Sbjct: 471 LLENVSLETTLFDRLLSMHGPGIKRM-LTTQYRMHEKIMQFPSDELYDSKLMAADSVKDR 529
Query: 653 QSSGIDFPWPVP-----NRPMFFYVQMGQE-----------EISASGTSYLNRTEAANVE 696
D P+ V P+ F+ G + + + G S N EA V
Sbjct: 530 LLK--DLPYEVEETDDTKEPLVFWDTQGGDFPEKTEDADLGKKAHLGESKSNDMEALVVS 587
Query: 697 KIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREK 756
+ V + +G+ P I VITPY GQ A + + LR++ Y IE+ SVD FQGREK
Sbjct: 588 RHVDALVDAGIHPEDIAVITPYNGQLAVL------SQMLREK-YPSIELGSVDGFQGREK 640
Query: 757 DYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+ +++S VRSN +GFL + RRLNVA+TR + + I G+ + +SK
Sbjct: 641 EAVVVSLVRSNSEHEVGFLGERRRLNVAMTRPKRHLCICGDSETISK 687
>gi|301116633|ref|XP_002906045.1| DNA polymerase alpha-associated DNA helicase A, putative
[Phytophthora infestans T30-4]
gi|262109345|gb|EEY67397.1| DNA polymerase alpha-associated DNA helicase A, putative
[Phytophthora infestans T30-4]
Length = 988
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 157/494 (31%), Positives = 254/494 (51%), Gaps = 74/494 (14%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQV AV+ L + ++LI GPPGTGKT T + + +VLVCAPSN+AVD
Sbjct: 209 LNESQVEAVRFALASKDLALIHGPPGTGKTTTVVEFILQAVTRFDLKVLVCAPSNIAVDN 268
Query: 450 LAEKISAT------GLKVVRL--------------------CAKSREAVSSPVEHLTLHY 483
+ +K+++T LK+ R+ A+ E V+ + ++
Sbjct: 269 VLDKLASTCSTLRKKLKLTRIGHPARVLPQILNYCLDAKIESAEGTEIVNDIRQEMS-SM 327
Query: 484 QVRHLDTSEKSELHKL-QQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGA 542
Q + T +KSE ++L +++K + E+ + ++K +I + +DV+ T VGA
Sbjct: 328 QKKLQKTRDKSERYRLRREMKANRKEIRTREQKVVG--------DIIRHSDVVFATNVGA 379
Query: 543 GDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
L + F V+IDE+ QA E C IP+ L AK+ VL GDH QL P I + AA GL
Sbjct: 380 ASKLLKDVTFDLVIIDEAAQALEASCWIPM-LKAKRCVLAGDHLQLPPTIKSRAAAAKGL 438
Query: 603 AQSLFERLV-LLGLKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQN--GVT---INERQS 654
+LF+R+ + I L QYRMH +SE+ S + Y+G L++ GV ++E
Sbjct: 439 EVTLFDRVTSYTNTQSIVKMLDTQYRMHQDISEWSSQAMYKGELKSFEGVARRKLHELPH 498
Query: 655 SGIDFPWPVPNRPMFFYVQMG-------QEEISASGTSYLNRT---EAANVEKIVTTFLR 704
I + + + G ++E AS T L+++ EA V + V+ L+
Sbjct: 499 VSISKEDELLDATLLLLDTAGCELEEDAKDEEKASSTLQLSKSNEGEAHVVARHVSALLK 558
Query: 705 SGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCV 764
+G+ ++ VITPY Q + AL + Y ++E+ SVD FQG EK+ +++S V
Sbjct: 559 AGLKEEEVAVITPYNKQVQTL-------KALLLESYPKLEIRSVDGFQGCEKEAVVMSLV 611
Query: 765 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH------- 817
RSN + +GFL D RR+NVA+TRA+ + ++ + +S +GL+ H++++
Sbjct: 612 RSNASRQVGFLADDRRMNVAITRAKRHVAVVCDTDTISSHKFLSGLVKHFEKYGEYRSAQ 671
Query: 818 ----ECLVEGPLNN 827
E +VEG ++
Sbjct: 672 EYLDEDVVEGAMDE 685
>gi|354545469|emb|CCE42197.1| hypothetical protein CPAR2_807460 [Candida parapsilosis]
Length = 1950
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 178/584 (30%), Positives = 273/584 (46%), Gaps = 105/584 (17%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQG--------------- 433
++N SQ A+ Q SLIQGPPGTGKT T IV + G
Sbjct: 1273 DVNMSQAKAIIGSYQSEGFSLIQGPPGTGKTKTILGIVGYSLSHGVNEKAIEAPSKSASP 1332
Query: 434 --QGQVLVCAPSNVAVDQLAEKI-----SATG----LKVVRLCAKSREAVSSPVEHLTLH 482
+ ++L+CAPSN AVD+L ++ ++ G LKVVRL +A++ V LTL
Sbjct: 1333 SSRAKILICAPSNAAVDELVVRLRNGVRNSKGENMPLKVVRL--GRSDAINQAVRDLTLE 1390
Query: 483 YQV-------------------------------------RHLDTSEKSELH-KLQQLKD 504
V LD+ E+ ++ KL+++
Sbjct: 1391 ELVDKELQTKQVDVATDQNLRPELNKKTQERDTLRSRLNDETLDSKERDDVQQKLREINK 1450
Query: 505 EQGELSSS-DEKKYKAL---------KRATEREISQSADVICCTCVGAGDPRLANF--RF 552
++ EL+ DE++ + +R + I A+++C T G+ +AN F
Sbjct: 1451 QRSELAKKLDEQRERTSIAYRNKEIDRRNIQARILSEANILCATLSGSAHDLVANLAVTF 1510
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 612
QV+IDE+ Q +E +IPL G ++ ++VGD QL P ++ + AA QSLF R+
Sbjct: 1511 DQVIIDEACQCSESAAIIPLRYGCRRCIMVGDPNQLPPTVLSQTAASLNYDQSLFVRMQK 1570
Query: 613 LGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV--PNRPMF 669
I L QYRMHP +S+FPS FY+ L +G + E+ + PW P P
Sbjct: 1571 NHPDSIYLLNTQYRMHPMISKFPSAEFYQSKLIDGPGMQEKNTR----PWHSVDPLSPYR 1626
Query: 670 FYVQMGQEEISASGTSYLNRTEAANV-----EKIVTTFLRSGVVPSQIGVITPYEGQRAY 724
F+ + + E + S N TE ANV +K++T + + +IG+I+PY+ Q
Sbjct: 1627 FFDIVSRHEKNELTRSLYN-TEEANVCLQLVQKMMTMVPQKDIA-GKIGIISPYKEQIKT 1684
Query: 725 IVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 784
I R A + ++ EI+ +VD FQG+EK+ II+SCVR++ + IGFL+D RR+NVA
Sbjct: 1685 IKRVFER--AFGRLIFNEIDFNTVDGFQGQEKEIIIMSCVRASANGSIGFLSDIRRMNVA 1742
Query: 785 LTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLK-----QSMVQFQKP- 838
LTRA + ILGN L++ +W L+ ++ + + L S +P
Sbjct: 1743 LTRACTTLWILGNKNSLARDEVWKRLIEDAEKRIAVTKAYSGFLSTYASASSFNPIDRPS 1802
Query: 839 KKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGP 882
K+ D F P + PN R G G++PP P
Sbjct: 1803 KRFQKDDGQFKNKKQKTRPQEGLPKKPNGVRNG----GHLPPIP 1842
>gi|46133873|ref|XP_389252.1| hypothetical protein FG09076.1 [Gibberella zeae PH-1]
Length = 1721
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 156/479 (32%), Positives = 234/479 (48%), Gaps = 74/479 (15%)
Query: 388 LPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHM-AKQGQGQVLVCAPSNVA 446
+ +LN SQ A++ L+ + + GPPGTGKT T ++ + + +VLV AP++ A
Sbjct: 1278 IDKLNESQNKAIQLALESSLLCLWGPPGTGKTETIVEMICALQIANEKARVLVTAPTHNA 1337
Query: 447 VDQLAEKISATGLKVVRLCAKSREA------VSSPVEHLTLHYQVRHLDTSEKSELHKLQ 500
VD + + +K ++ +R+ VS+ V ++ + D E+H
Sbjct: 1338 VDNVMRRY----IKQIQEQPLARKVQPNVLRVSTEVHKVSDDLRKYTCDAMAGQEIHG-- 1391
Query: 501 QLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDES 560
YKA+K+AT+ + + +D + TC+GAG L + F V++DE+
Sbjct: 1392 ---------------DYKAMKKATQ--MIKDSDTVFTTCIGAGIGLLRSEFFDIVIVDEA 1434
Query: 561 TQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL-------L 613
+Q TEP L+PLV G + +LVGDH QL P + A SLFERL
Sbjct: 1435 SQQTEPSSLVPLVKGCSKAILVGDHVQLRPTVQQTSLA-LDFDVSLFERLYTEAGGSTES 1493
Query: 614 GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP--------- 664
G + L QYRMHP L EF S +FYEG L++G+ I++R +FP+P+
Sbjct: 1494 GFNTMMLDTQYRMHPKLCEFSSGAFYEGKLKSGIGISDRPLIKSEFPFPLAVLTKQSGDS 1553
Query: 665 ---NRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQ 721
+ +V +EI G S N+ +A I L S I V+TPY Q
Sbjct: 1554 GKTDYERAIFVNCDTKEIQ--GKSKENKGQAELCLHICK-LLTSQNDTQSIVVLTPYTRQ 1610
Query: 722 RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
+L++ L IEV+S+D FQGRE D I+ VR NEH+ IGFL D RR+
Sbjct: 1611 AE----------SLKRMLPSTIEVSSIDGFQGREADVIVFVTVRCNEHRSIGFLKDMRRM 1660
Query: 782 NVALTRARYGIVILGNPKVLSK-------QPLWNGLLTHYKEHECLV----EGPLNNLK 829
NVALTRAR ++++G+ L++ +W LL E + V +GP + LK
Sbjct: 1661 NVALTRARSAVIVIGHRATLTEGTEDEESSAMWKWLLRSLTEVKVEVPTSGDGPTDGLK 1719
>gi|346979330|gb|EGY22782.1| DNA-binding protein SMUBP-2 [Verticillium dahliae VdLs.17]
Length = 649
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 151/467 (32%), Positives = 240/467 (51%), Gaps = 64/467 (13%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R ++LI GPPGTGKT T ++ + ++ Q ++LVC PSN++V
Sbjct: 166 PSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQLVRRDQ-RILVCGPSNISV 224
Query: 448 DQLAEKISATGLKVVRLCAKSR---EAVSSPVEHLT-------LHYQVRHLDTSEKSELH 497
D + E+++ + ++RL +R ++ ++ LT + VR ++++ L
Sbjct: 225 DNIVERLAPHKIPIIRLGHPARLLPSVLAHSLDVLTHTSSAGAIVQDVRAEMDAKQASLK 284
Query: 498 KLQQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
K + +D + + + K+Y+ +R RE+ + V+ T GAG +L + +F V
Sbjct: 285 KARTGRDRRAIYADLKDLRKEYRERERGCLRELVGGSKVVLATLHGAGGFQLRDEKFDVV 344
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVI--------MCKKAAR-------- 599
+IDE++QA E +C +PL L A +VV GDH QL P I M KK
Sbjct: 345 IIDEASQALEAQCWVPL-LRANKVVCAGDHLQLPPTIKSLNSKTNMPKKKDEEEVPIVKG 403
Query: 600 AGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
L +LF+RL+ L I+ L QYRMH ++ FPS+ YEG L ++ R
Sbjct: 404 MTLETTLFDRLLSLHGPSIKRMLITQYRMHEAIMRFPSDELYEGRLVAAESVATRLLK-- 461
Query: 658 DFPWPV-----PNRPMFFYVQMG----------------QEEISASGTSYLNRTEAANVE 696
D P+ V N P+ F G + ++S +G S N EAA V
Sbjct: 462 DMPYAVQDTEDTNEPLVFIDTQGGDFPEKSEEDSDDAAKKAKLSLNGESKSNEMEAAVVR 521
Query: 697 KIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREK 756
+ + +G+ P I V+TPY Q A + L+++L IE+ SVD FQGREK
Sbjct: 522 QHARQLVEAGIKPEDIAVVTPYNAQLALL-------APLKEEL-PGIELGSVDGFQGREK 573
Query: 757 DYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+ +I+S VRSN +GFL + RRLNVA+TR + + ++G+ + + +
Sbjct: 574 EAVIVSLVRSNGDGEVGFLAEKRRLNVAMTRPKRSLTVVGDSETVKR 620
>gi|123449356|ref|XP_001313398.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121895280|gb|EAY00469.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 285
Score = 210 bits (534), Expect = 4e-51, Method: Composition-based stats.
Identities = 111/278 (39%), Positives = 164/278 (58%), Gaps = 8/278 (2%)
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F +++DE +Q+ +PE +IPL+ +++LVGD QL P++ K++ A ++ +RL
Sbjct: 6 FDTLIVDECSQSVDPEVIIPLLKTKTRLILVGDQKQLPPLLFAKESKIAKYDNTIIDRLE 65
Query: 612 LLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY 671
L + P Q+RMHPS+S+FPS FY+ + +G++ R WP P+ F+
Sbjct: 66 KLNIAP-----QFRMHPSISQFPSAEFYDSKVADGISQEYRTKCLKWIQWPNNGLPILFW 120
Query: 672 VQMGQ-EEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMS 730
G+ EE S+ G S +NR + V ++ L + PS IGVI+PY GQ Y+ + +
Sbjct: 121 EFKGKPEEKSSDGKSNINRDQVQCVANLID-ILVNKANPSDIGVISPYSGQNFYLRDNLH 179
Query: 731 RNGALRQQLY-KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 789
R + + Y K IE++S+DSFQGREK+ II S V+SN IGFLND R LNVALTRAR
Sbjct: 180 RYTKIAGEDYIKRIEISSIDSFQGREKELIIFSTVKSNNTYDIGFLNDERSLNVALTRAR 239
Query: 790 YGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
G++I+G+ K W LL +Y H CL G +NN
Sbjct: 240 CGLIIIGDSNTFIKSKNWLSLLRYYSSHRCLCSGTVNN 277
>gi|124087769|ref|XP_001346867.1| TRNA-splicing endonuclease positive effector [Paramecium
tetraurelia strain d4-2]
gi|145474903|ref|XP_001423474.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057256|emb|CAH03240.1| TRNA-splicing endonuclease positive effector, putative [Paramecium
tetraurelia]
gi|124390534|emb|CAK56076.1| unnamed protein product [Paramecium tetraurelia]
Length = 1124
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 242/490 (49%), Gaps = 87/490 (17%)
Query: 392 NASQVFAVKSVL--QRPISLIQGPPGTGKTVTSAAI---VYH----MAKQGQGQVLVCAP 442
N SQ A++ ++ R ISL+QGPPGTGKT T + VY M K + ++L+CAP
Sbjct: 501 NFSQATAIQQIILQDRGISLLQGPPGTGKTHTLIGLLSGVYEYMKIMNKFPKKKILICAP 560
Query: 443 SNVAVDQLAEKISATGL----------KVVRLCAKSREAVSSPV-EHLTL----HYQVRH 487
SN A+D++ +I GL K+VRL E S + + ++L YQ+ +
Sbjct: 561 SNAAIDEIIFRILQGGLFDCEGRSRTVKLVRLGVLDEENDKSVIIKQVSLEDVAQYQLFN 620
Query: 488 -----LDTSEKS------ELHKLQQLKDEQGELSSSDEKKYKALK--------------- 521
++ +K+ EL K Q + E+ DE++ K L
Sbjct: 621 KSSFKANSDQKTTGELRIELSKTTQAIKKIKEMEKYDEQQKKQLNELWNKRNQLMQYLEQ 680
Query: 522 -RATER-----------EISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPE 567
R +R +I A+++C T AG +L+ F F +++DE+ Q TEP
Sbjct: 681 VRTNKRNQKENYVLFCEKIISEAEILCSTLSTAGTDKLSKFIDSFELLIVDEAAQCTEPS 740
Query: 568 CLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMH 627
IPL LG ++++L+GD QL + +SLFER++ KP L +QYRMH
Sbjct: 741 NNIPLRLGMRKMILIGDPKQLPATTFSSVSQITHYNRSLFERILDNDFKPFFLDMQYRMH 800
Query: 628 PSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFF-----YVQMGQEEISAS 682
P + EFPS +FY+ L + ++ ER +PN FF ++ + EE +
Sbjct: 801 PQIREFPSLNFYDNKLIDHFSVYER---------LIPNN--FFNQRVLFIDVESEE-TKD 848
Query: 683 GTSYLNRTEAANVEKIVTTFLRSGVVPSQ-IGVITPYEGQRAYIVNYMSRNGALRQQLYK 741
S+ N+TE + +++ PSQ +GVI Y+ Q I + R L
Sbjct: 849 EKSFQNQTECNMIVEVLKNI--KNAYPSQSLGVICAYKAQVRLIKLEIKRQLG---DLMD 903
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
EI++ +VDSFQG+E+D I+ SCVRS+ IGFL D RR+NVALTRA+ + I GN L
Sbjct: 904 EIQINTVDSFQGQERDVILFSCVRSSSSGNIGFLQDGRRVNVALTRAKNALFIFGNAITL 963
Query: 802 SKQPLWNGLL 811
+ LW LL
Sbjct: 964 GQCQLWKNLL 973
>gi|366999100|ref|XP_003684286.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
gi|357522582|emb|CCE61852.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
Length = 2074
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 189/618 (30%), Positives = 276/618 (44%), Gaps = 117/618 (18%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQ----------------- 432
LN SQ AV +V SLIQGPPGTGKT T IV H+
Sbjct: 1340 LNDSQAMAVVNTVAADGFSLIQGPPGTGKTKTILGIVGHILTTQDALPKNIIKVPGEQNS 1399
Query: 433 --------GQGQVLVCAPSNVAVDQLAEKIS---ATG------LKVVRLCAKSREAVSSP 475
+ +VL+CAPSN AVD++ ++ AT L VVR+ +AV++
Sbjct: 1400 SPALEQTLKRKKVLICAPSNAAVDEICLRLRNGIATNNGNPFLLSVVRIGRS--DAVNAA 1457
Query: 476 VEHLTLHYQVRH--------------------------------LDTS------------ 491
++ LTL V LD+
Sbjct: 1458 IKDLTLEELVEKKVSEKNYNMTSNPDLERKFSSCVTKRRAARAKLDSENGAIDSTMSTEE 1517
Query: 492 ------EKSELHK-LQQLKDEQGELSSSDEKKYKAL---KRATEREISQSADVICCTCVG 541
E EL K + QL E+ E+ + Y+ +R + + ++++IC T G
Sbjct: 1518 ITNLQLEIRELSKQINQLGKERDEIREQNSINYRNRELDRRNAQARVLANSNIICSTLSG 1577
Query: 542 AGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR 599
+ L+ +F V+IDE+ Q TE +IPL GAK+ ++VGD QL P ++ KA+
Sbjct: 1578 SAHDVLSTLGVKFDTVIIDEACQCTELSAIIPLRYGAKRCIMVGDPNQLPPTVLSSKASS 1637
Query: 600 AGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQSSG 656
QSLF R+ P L VQYRMHPS+S FPS FY+G L++G I +R
Sbjct: 1638 LNYDQSLFVRME-KKCSPYLLNVQYRMHPSISAFPSLEFYDGKLKDGPDMANITKRPWHS 1696
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR----SGVVPSQI 712
ID P FF + G+ E ++ SY N EA ++V L+ +I
Sbjct: 1697 IDSLGPYK----FFDIISGRHEQNSRTMSYNNPEEARVAVELVDFLLKRFENKYDFTGKI 1752
Query: 713 GVITPYEGQRAYIVNYMSRN--GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
GVI+PY+ Q + + RN G L + K ++ ++D FQG+EK+ IILSCVR+N+
Sbjct: 1753 GVISPYKEQ-VFKLRREFRNHFGLL---IEKYVDFNTIDGFQGQEKEIIILSCVRANDSD 1808
Query: 771 ---GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
G+GFL D RR+NVA TRA+ + ILG+ + L + LWN L+T+ K+ L
Sbjct: 1809 HASGVGFLKDFRRMNVAFTRAKSSLWILGHHRSLKRDKLWNHLITNAKQRNKLELACSGF 1868
Query: 828 LKQSMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTH 887
L + + K + Y D + G P +S + ++ + + P N
Sbjct: 1869 LDINNTRVIKILEHYKDSHNYIGGDDDYSP--VSRYDNESNNSKRKLKEIKNSTPMNENV 1926
Query: 888 KPGLHPAGFPMPRVPLPP 905
K H P PL P
Sbjct: 1927 KKQKHSREIVAPN-PLRP 1943
>gi|154311776|ref|XP_001555217.1| hypothetical protein BC1G_06347 [Botryotinia fuckeliana B05.10]
Length = 675
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 235/465 (50%), Gaps = 62/465 (13%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A+K L ++LI GPPGTGKT T ++ M K+ +VLVC PSN++V
Sbjct: 223 PSLNDSQKHAIKFALASTEMALIHGPPGTGKTHTLIELILQMLKRNL-RVLVCGPSNISV 281
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + +VRL +R + ++ E + VR ++++ +
Sbjct: 282 DNIVERLAPHKVPIVRLGHPARLLPSVVNHSLDVLTQTSEAAAIVQDVRKEMDTKQASIK 341
Query: 498 KLQQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
K + K+ + E K+++ +R + + V+ T GAG +L + +F V
Sbjct: 342 KTKSGKERKAIYGDLKELRKEFRERERKCVNTLVGGSKVVLATLHGAGGFQLRDEKFDVV 401
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC---KKAARA------------ 600
+IDE++QA E +C +PL L A +VVL GDH QL P I K ++
Sbjct: 402 IIDEASQALEAQCWVPL-LSASKVVLAGDHLQLPPTIKSLNFKTKTKSQDTETEGIIKGM 460
Query: 601 GLAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
L +LF+RL+ L G+K + L QYRMH + FPS+ YE L + R +
Sbjct: 461 TLETTLFDRLLKLHGAGIK-VMLTTQYRMHEKIMRFPSDELYESKLVAAEAVKARLLT-- 517
Query: 658 DFPWPVPN-----RPMFFYVQMG--------QEEISAS------GTSYLNRTEAANVEKI 698
+ P+ V P+ F+ G +E + G S N EA V +
Sbjct: 518 ELPYDVEETEDTIEPLIFFDTQGDDFPEKSEEENVDKKAGKGMLGESKSNEMEAVLVRRH 577
Query: 699 VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
V + +G+ P I V+TPY Q A MSR+ ++ + IE+ SVD FQGREK+
Sbjct: 578 VQNLVDAGLKPEDIAVVTPYNAQLAL----MSRS---MKEAFPGIELGSVDGFQGREKEA 630
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
II+S VRSN + +GFL + RRLNVA+TR R + I+G+ + +S+
Sbjct: 631 IIVSLVRSNSEREVGFLGEKRRLNVAMTRPRRSLTIIGDSETVSR 675
>gi|347827230|emb|CCD42927.1| similar to DNA helicase [Botryotinia fuckeliana]
Length = 703
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 235/465 (50%), Gaps = 62/465 (13%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A+K L ++LI GPPGTGKT T ++ M K+ +VLVC PSN++V
Sbjct: 223 PSLNDSQKHAIKFALASTEMALIHGPPGTGKTHTLIELILQMLKRNL-RVLVCGPSNISV 281
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + +VRL +R + ++ E + VR ++++ +
Sbjct: 282 DNIVERLAPHKVPIVRLGHPARLLPSVVNHSLDVLTQTSEAAAIVQDVRKEMDTKQASIK 341
Query: 498 KLQQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
K + K+ + E K+++ +R + + V+ T GAG +L + +F V
Sbjct: 342 KTKSGKERKAIYGDLKELRKEFRERERKCVNTLVGGSKVVLATLHGAGGFQLRDEKFDVV 401
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC---KKAARA------------ 600
+IDE++QA E +C +PL L A +VVL GDH QL P I K ++
Sbjct: 402 IIDEASQALEAQCWVPL-LSASKVVLAGDHLQLPPTIKSLNFKTKTKSQDTETEGIIKGM 460
Query: 601 GLAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
L +LF+RL+ L G+K + L QYRMH + FPS+ YE L + R +
Sbjct: 461 TLETTLFDRLLKLHGAGIK-VMLTTQYRMHEKIMRFPSDELYESKLVAAEAVKARLLT-- 517
Query: 658 DFPWPVPN-----RPMFFYVQMG--------QEEISAS------GTSYLNRTEAANVEKI 698
+ P+ V P+ F+ G +E + G S N EA V +
Sbjct: 518 ELPYDVEETEDTIEPLIFFDTQGDDFPEKSEEENVDKKAGKGMLGESKSNEMEAVLVRRH 577
Query: 699 VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
V + +G+ P I V+TPY Q A MSR+ ++ + IE+ SVD FQGREK+
Sbjct: 578 VQNLVDAGLKPEDIAVVTPYNAQLAL----MSRS---MKEAFPGIELGSVDGFQGREKEA 630
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
II+S VRSN + +GFL + RRLNVA+TR R + I+G+ + +S+
Sbjct: 631 IIVSLVRSNSEREVGFLGEKRRLNVAMTRPRRSLTIIGDSETVSR 675
>gi|350633858|gb|EHA22222.1| DNA helicase [Aspergillus niger ATCC 1015]
Length = 721
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 236/467 (50%), Gaps = 65/467 (13%)
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R I+LI GPPGTGKT T ++ M ++ Q +VLVC PSN++V
Sbjct: 241 PTLNDSQKEAIRFALAAREIALIHGPPGTGKTHTLIELIVQMVQRKQ-RVLVCGPSNISV 299
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + VVR+ +R E ++ E + VR +++ +
Sbjct: 300 DNIVERLAPKKVPVVRIGHPARLLPSVLDHSLEVLTHTSEAAAIVRDVRKEIDQKQASIR 359
Query: 498 KLQQLKDEQG---ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + +L + + + E + +S+ V+ T GAG +L N +F
Sbjct: 360 KTRAARERRAIYDDLRELRREFRERENKCVENLVRESS-VVLATLHGAGGHQLKNQKFDV 418
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA---------------- 598
V+IDE++QA E +C IPL L A +VVL GDH QL P + K
Sbjct: 419 VIIDEASQALEAQCWIPL-LSASKVVLAGDHLQLPPTVKSTKENAKKAAKEKEDKKENGE 477
Query: 599 ---RAGLAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
L +LF+RL+ + G+K + L QYRMH + +FPS+ Y+ L ++ +R
Sbjct: 478 LLENVSLETTLFDRLLSMHGPGIKRM-LTTQYRMHEKIMQFPSDELYDSKLMAADSVKDR 536
Query: 653 QSSGIDFPWPVP-----NRPMFFYVQMGQE-----------EISASGTSYLNRTEAANVE 696
D P+ V P+ F+ G + + + G S N EA V
Sbjct: 537 LLK--DLPYEVEETDDTKEPLVFWDTQGGDFPEKTEDADLGKKAHLGESKSNDMEALVVS 594
Query: 697 KIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREK 756
+ V + +G+ P I VITPY GQ A + + LR++ Y IE+ SVD FQGREK
Sbjct: 595 RHVDALVDAGIHPEDIAVITPYNGQLAVL------SQMLREK-YPSIELGSVDGFQGREK 647
Query: 757 DYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+ +++S VRSN +GFL + RRLNVA+TR + + I G+ + +SK
Sbjct: 648 EAVVVSLVRSNSEHEVGFLGERRRLNVAMTRPKRHLCICGDSETISK 694
>gi|183230332|ref|XP_654283.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169802981|gb|EAL48897.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 965
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 179/312 (57%), Gaps = 12/312 (3%)
Query: 527 EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
+I + +C T P L +F ++DE+ Q+ EPE L ++ ++ VL+GD
Sbjct: 621 DILSGIECVCSTLTICTRPTLLKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDIQ 679
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVL-LGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQN 645
QL P + +A AG +S+FER + +K L+ QYRMHP++SEF + FY L+N
Sbjct: 680 QLQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLEN 739
Query: 646 GVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS 705
GV+ +R + I +P P+ F G E+ +SGTSY N E ++++V L +
Sbjct: 740 GVSSKDRFDNRIINFFPDYTNPIMFINCDGTEQYGSSGTSYNNAGEVQIIQEVVEKLLNN 799
Query: 706 GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 765
+ ++IG+I+PY+ Q+ I Y+S +I+VA++D FQG EK+YII SCVR
Sbjct: 800 DIEENEIGIISPYQAQQELISQYVS----------TKIKVANIDGFQGNEKEYIIFSCVR 849
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPL 825
SN+ G+GF+ND +RLNVALTRA+ G++I+GN L +WN L+ + + L E
Sbjct: 850 SNQTLGVGFVNDYKRLNVALTRAKRGLIIIGNIPTLVTSKVWNMLIHQFYLRDALFELKE 909
Query: 826 NNLKQSMVQFQK 837
++ Q V+ Q+
Sbjct: 910 HDFVQYNVENQE 921
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 357 VSGYIYHHLLGHEVEVQMVRNTL------PRRFGAPGLPELNASQVFAVKSVLQRPISLI 410
+ GY L +++++ + + ++ P L LN Q A+ + L ISL+
Sbjct: 324 IDGYYSKILCCNKIQLTKTKEIITYEEMSEEKYNIPNLSNLNDYQTKAIYNALNEDISLV 383
Query: 411 QGPPGTGKTVTSAAIV---------YHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKV 461
GPPGTGKT + +I ++ +G+ ++LVCA SN AVD + K+ G+
Sbjct: 384 IGPPGTGKTTVAVSIAQYLIYNKYRFYNINRGEKKLLVCASSNNAVDVICLKLIEKGIPT 443
Query: 462 VRLCA 466
VR+ A
Sbjct: 444 VRVVA 448
>gi|327304821|ref|XP_003237102.1| DNA helicase [Trichophyton rubrum CBS 118892]
gi|326460100|gb|EGD85553.1| DNA helicase [Trichophyton rubrum CBS 118892]
Length = 717
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 168/529 (31%), Positives = 250/529 (47%), Gaps = 83/529 (15%)
Query: 338 TSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPG-----LPELN 392
++ RM M + S + L GH LP F + G P LN
Sbjct: 179 VTYRRMNQTMAKLEKLQESEHSQLIRVLFGHT-------TPLPLDFESVGPLEFMDPSLN 231
Query: 393 ASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLA 451
SQ A++ L R I+LI GPPGTGKT T ++ + Q + +VLVC PSN++VD +
Sbjct: 232 DSQKEAIRFALASREIALIHGPPGTGKTHTLIELIRQLV-QRKKRVLVCGPSNISVDNIV 290
Query: 452 EKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 501
E++++ + +VR+ +R E +S E + VR S+++ + K +
Sbjct: 291 ERLASHKVPLVRVGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRN 350
Query: 502 LKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDE 559
++ + E K+++ + I + V+ T GAG +L N +F VLIDE
Sbjct: 351 GRERRAIYGDLKELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDE 410
Query: 560 STQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA------------------- 600
++QA E +C IPL L A +VVL GDH QL P I K ++
Sbjct: 411 ASQAREAQCWIPL-LPASRVVLAGDHLQLPPTIKSKSSSNLYQINSALWDKKEDLHFNEL 469
Query: 601 -------GLAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTIN 650
L +LF+RL+ L G+K + L QYRMH + +FPS+ YE L +
Sbjct: 470 SNTFDMRNLEITLFDRLLSLHGTGIKRM-LTTQYRMHQKIMDFPSDELYESKLIAADAVR 528
Query: 651 ERQSSGIDFPWPVPN-----RPMFFYVQMGQE---------EISASG---TSYLNRTEAA 693
ER D + V + P+ FY G + ISA S N EAA
Sbjct: 529 ERLLK--DLHYEVEDTDDTREPLVFYDTQGGDFLEKSPDSNGISAKSLLVESKCNDMEAA 586
Query: 694 NVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQG 753
V + V + +GV P I VITPY Q A + L ++ + +E+ SVD FQG
Sbjct: 587 VVARHVENLVSAGVRPEDIAVITPYNAQVALL-------SQLLKEKFPTLELGSVDGFQG 639
Query: 754 REKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 802
REK+ +++S VRSN+ +GFL + RRLNVA+TR R + I G+ + +S
Sbjct: 640 REKEAVVVSLVRSNQDHEVGFLGEKRRLNVAMTRPRRHLCICGDSETVS 688
>gi|330917057|ref|XP_003297659.1| hypothetical protein PTT_08146 [Pyrenophora teres f. teres 0-1]
gi|330935060|ref|XP_003304815.1| hypothetical protein PTT_17500 [Pyrenophora teres f. teres 0-1]
gi|311318413|gb|EFQ87087.1| hypothetical protein PTT_17500 [Pyrenophora teres f. teres 0-1]
gi|311329531|gb|EFQ94249.1| hypothetical protein PTT_08146 [Pyrenophora teres f. teres 0-1]
Length = 1967
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 255/547 (46%), Gaps = 106/547 (19%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV------------YHMAKQGQGQ- 436
+N +Q A+KS + +LIQGPPG+GKT T AIV ++A GQ Q
Sbjct: 1273 VNMAQGKAIKSAIDNDGFTLIQGPPGSGKTKTITAIVGAILSGSFRNRGTNIAVPGQPQS 1332
Query: 437 ------VLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAVSSPVEHLT 480
+LVCAPSN AVD+L + G+K +VRL EAV + ++ LT
Sbjct: 1333 DAAPKKILVCAPSNAAVDELCMRFR-QGIKTLNGEERQISIVRLGRS--EAVKASIQDLT 1389
Query: 481 LHYQV---------------------------RHLDTSEK-SELHKLQQLKDEQGELSSS 512
L V H +TS++ E + L+ + +GE ++
Sbjct: 1390 LDELVDKRLGAEKRSDADSNGNEQEARQKVFSEHQETSKQLREAYDLRNKGEVKGEAAAK 1449
Query: 513 DEKKYKALKR-----------------ATERE-----------ISQSADVICCTCVGAGD 544
+ AL R AT R+ I A V+C T G+G
Sbjct: 1450 LDNDISALYRKKKELSGQIDAIKDNQAATGRKADARRDKAIAAILNDAHVVCSTLSGSGH 1509
Query: 545 P--RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
R F V++DE+ Q E LIPL G + +LVGD QL P I K+AAR
Sbjct: 1510 NMFRTIEVEFDTVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTIFSKEAARFRY 1569
Query: 603 AQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
AQSLF R+ + L QYRMHP +S FPS +FY+G L +G + + PW
Sbjct: 1570 AQSLFMRMQQNHPNDVHLLDTQYRMHPEISLFPSQTFYDGKLLDGGDMASLRKQ----PW 1625
Query: 662 PVPNR--PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVIT 716
+ P F+ GQ++ + SG S +N E A + +T+ +IG+IT
Sbjct: 1626 HQSSLLGPYRFFDVKGQQQKAPSGKSLMNIAEINVALQLYNRLTSDYPDYNFKGKIGIIT 1685
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PY+ Q I + A Q + ++I+ + D+FQGRE + II SCVR+N GIGFL+
Sbjct: 1686 PYKSQLQEIKQRFMK--AYGQTIIEDIDFNTTDAFQGRESEIIIFSCVRAN--GGIGFLD 1741
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN-LKQSMVQF 835
D RR+NV LTRA+ + +LGN L WN L+ + + + +G ++ L Q +F
Sbjct: 1742 DVRRMNVGLTRAKSSLWVLGNSASLQSGEFWNKLIVNAQARKRFTDGDISRMLNQHSSKF 1801
Query: 836 QKPKKIY 842
PK+ Y
Sbjct: 1802 PAPKEGY 1808
>gi|115372685|ref|ZP_01459992.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|310823878|ref|YP_003956236.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|115370406|gb|EAU69334.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|309396950|gb|ADO74409.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
Length = 640
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 250/516 (48%), Gaps = 63/516 (12%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRF----G 384
+D V +++RM+ + + V LLG+E P RF
Sbjct: 125 LRLDVVPNDVTYERMRAGLARVKALDKGVERRRREVLLGNE----------PPRFEKPSD 174
Query: 385 APGLPELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 443
AP LN Q AV +++ L+ GPPGTGK+ A + +G+ ++L A S
Sbjct: 175 APPSRPLNPEQADAVSRALAAEDFFLVHGPPGTGKSTVLAEVAVQAVARGE-RLLCTAAS 233
Query: 444 NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSELH----- 497
N AVD L E GL+ +R+ +R V+ + TL V H D EL
Sbjct: 234 NAAVDHLLELCLEQGLRAIRVGHPAR--VAPRFQEHTLDIVVEEHPDRVLSRELFDEAFS 291
Query: 498 -----KLQQLKDEQGEL-----SSSDEKK-----YKALKRATEREISQSADVICCTCVGA 542
+ Q+ + E SS+ E K +AL+R R + + A VIC T
Sbjct: 292 LFGYARRQRTQGRSRERFSNARSSTAEAKGLMDDARALERKAVRAVLERAQVICVTLASL 351
Query: 543 GDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
G LA+ F + LIDE+TQATEP L+ L A ++VL GD QL P ++ ++AA+AGL
Sbjct: 352 GSGVLAHEEFDRALIDEATQATEPLTLLGF-LRAPKLVLAGDPQQLPPTVLSQEAAKAGL 410
Query: 603 AQSLFERLVL---LGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ-----S 654
SLFERL+ G+K + L+ QYRM+ + +FPS Y G L+ ++ ER S
Sbjct: 411 GVSLFERLLQDHGEGVKRM-LREQYRMNARIMDFPSREMYGGALRAHPSVAERTLAPVLS 469
Query: 655 SGIDFPWPVPNRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ 711
G + P P+ F G +E+ S S N EA + V L +G+ P +
Sbjct: 470 PGAELDAP----PVLFLDTAGKGFEEQEEESTHSLFNPGEADLILARVKALLAAGLSPRE 525
Query: 712 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
+ VI PY Q ++ + + L ++EV +VD+FQGREKD I++S RSN
Sbjct: 526 LAVIAPYSAQAFHLRERV-------EILSPDVEVDTVDAFQGREKDAILVSLTRSNADGN 578
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 807
+GFL D RR+NVA+TRAR + ++G+ LS P +
Sbjct: 579 LGFLTDLRRMNVAMTRARRHLFVVGDSATLSGHPFY 614
>gi|409099302|ref|ZP_11219326.1| ATPase AAA [Pedobacter agri PB92]
Length = 637
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 166/525 (31%), Positives = 261/525 (49%), Gaps = 71/525 (13%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLP---------R 381
VD ++ + S+D MQ A+K + +L H+ E +++
Sbjct: 126 VDLLFDNNSYDEMQNALKQAS------------NLADHQPENKLISILTEGEKPSFQNEE 173
Query: 382 RFGAPGLPELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC 440
+F P +LN SQ AV K V ++++ GPPGTGKT T + + K ++LV
Sbjct: 174 KFFIPN--KLNESQQQAVHKIVTANHLAIVHGPPGTGKTTTLVHAIKSLTKHYDQKILVV 231
Query: 441 APSNVAVDQLAEKISATGLKVVRLCAKSR---EAVSSPVEH-LTLHYQVRHLDTSEK--- 493
APSN AVD L EK++A GL V+R+ +R ++S +EH + H ++ + + +K
Sbjct: 232 APSNTAVDLLTEKLAAEGLNVIRIGNPARVSDRLLASTLEHKMADHPDMKSVKSLKKQAN 291
Query: 494 ---SELHKLQQL-----KDEQGELSSSDEKKYKALKRATEREISQS----ADVICCTCVG 541
+ HK ++ +D++ L K K +++ TE+ I + A +I T VG
Sbjct: 292 EFKNMAHKYKRSFGKAERDQRKALFDEAHKIGKEVEK-TEQYIMDNLFSKAQIITATLVG 350
Query: 542 AGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
A + N ++ V+IDE+ QA EP C IP +L A++VVL GDH QL P I +A R G
Sbjct: 351 ANHYTVRNLKYNTVVIDEAGQALEPACWIP-ILKAEKVVLAGDHFQLSPTIKSSEAGRNG 409
Query: 602 LAQSLFERLVLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
L+++L E+ V L P + L QYRMH S+ + S FY L + D
Sbjct: 410 LSKTLLEKSV--SLHPESVVLLNEQYRMHESIMGYSSQVFYNSQLHAHHAVARHLVFADD 467
Query: 659 FPWPVPNRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFL-----RSGVV-- 708
P+ F G E++ GTS N EA + ++ + + +V
Sbjct: 468 -------EPLAFIDTAGCSFDEKLD--GTSTTNPDEATFLVTHLSALIQELESKETIVDF 518
Query: 709 PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE 768
PS I +++PY+ Q+ IV + L +I V ++DSFQG+E+D + +S RSN
Sbjct: 519 PS-IAIVSPYK-QQVQIVKMLVEENELLMAHQDKISVNTIDSFQGQERDVVYISLTRSNA 576
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
IGFL D RR+NVA+TRAR +V++G+ LSK + + +
Sbjct: 577 DGSIGFLADTRRMNVAMTRARKKLVVIGDSATLSKAKFYADFIIY 621
>gi|115453945|ref|NP_001050573.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|50399951|gb|AAT76339.1| putative DNA helicase [Oryza sativa Japonica Group]
gi|108709563|gb|ABF97358.1| DNA helicase family protein, expressed [Oryza sativa Japonica
Group]
gi|113549044|dbj|BAF12487.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|215704640|dbj|BAG94268.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193224|gb|EEC75651.1| hypothetical protein OsI_12407 [Oryza sativa Indica Group]
gi|222625290|gb|EEE59422.1| hypothetical protein OsJ_11580 [Oryza sativa Japonica Group]
Length = 651
Score = 209 bits (533), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 229/449 (51%), Gaps = 32/449 (7%)
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ L+ R + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 202 LDESQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKRG-SKILACAASNIAVDN 260
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 502
+ E++S K+VRL +R + + S ++ L L + E+ KL +
Sbjct: 261 IVERLSRYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKLLKA 320
Query: 503 KDE------QGELSS--SDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
KD+ + EL + +E+K + L A ++ ++ADV+ T GA +L F
Sbjct: 321 KDKNTKRDIRKELRTLAKEERKRQQLAVA---DVIKNADVVLSTLTGASSKKLDGITFDL 377
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
V+IDE+ QA E C I L+ G + VL GDH QL P I +A + G+ ++LFERL
Sbjct: 378 VIIDEAAQALEMACWIALLKGPR-CVLAGDHLQLPPTIQSAEAEKKGMGKTLFERLTEAY 436
Query: 615 LKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID-FPWPVPNRPMFFY 671
I L +QYRMH + + S Y ++ ++ + I+ P
Sbjct: 437 GDQITSMLTIQYRMHELIMNWSSKELYNNKIKAHSSVADHMLYDIEEVKRSSSTEPTIIL 496
Query: 672 VQM---GQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNY 728
+ EE+ S +N EAA + SGV S IG+ITPY Q +
Sbjct: 497 IDTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVRASDIGIITPYAAQVTCL--K 554
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
M RN + K++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA
Sbjct: 555 MMRN---KDTKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRA 611
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R ++ + + +S L+ +++E+
Sbjct: 612 RRQCCLVCDVETVSNDKFLKRLVEYFEEN 640
>gi|258572474|ref|XP_002544999.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905269|gb|EEP79670.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 2153
Score = 209 bits (533), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 254/542 (46%), Gaps = 102/542 (18%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM-------------------A 430
LN +Q AVKS + +LIQGPPG+GKT T A+V + A
Sbjct: 1295 LNLAQSKAVKSAIDNDAFTLIQGPPGSGKTKTIVALVGALLSNTLSEHRIAPPRPGDKTA 1354
Query: 431 KQGQGQVLVCAPSNVAVDQLAEKIS---------ATGLKVVRLCAKSREAVSSPVEHLTL 481
+ ++LVCAPSN AVD+L + + + V+RL +A+++ V +TL
Sbjct: 1355 RSMAKKLLVCAPSNAAVDELVMRFKEGVKTLYGRSQNISVIRL--GRSDAINANVLDVTL 1412
Query: 482 HYQV----------------------RHLDTSEK-------------------SELHK-L 499
V H +TS K +EL +
Sbjct: 1413 DELVNAKLSQAGQKNGNERDLQSLYTEHKETSNKFNEIRERLDQCRAKGQAVPNELDREF 1472
Query: 500 QQLKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTCVGAGDPRLAN 549
LK ++ +LS S+ +K A +R ++EI A VIC T G+G
Sbjct: 1473 DLLKRKRAQLSQAIDSARDKNQAAARNAELTRRKIQQEIIDGAHVICATLSGSGHDMFQT 1532
Query: 550 F--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K+A+R QSLF
Sbjct: 1533 LSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYEQSLF 1592
Query: 608 ERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR 666
R+ + + L QYRMHP +S FPS +FY+G LQ+G + + PW +
Sbjct: 1593 VRMQANHPQDVHLLDTQYRMHPEISRFPSTAFYDGRLQDGPDMARLRMR----PWHNTSL 1648
Query: 667 --PMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGVITPYEG 720
P F+ G + G S +N R E+++ F + +IG+ITPY+G
Sbjct: 1649 LGPYRFFDVQGMHASAPKGHSLVNLAELRVAMRLYERLIADF-PTYDFSGKIGIITPYKG 1707
Query: 721 Q-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
Q R + ++ G ++K +E + D+FQGRE + II SCVR++ H GIGFL D R
Sbjct: 1708 QLRELKQQFANKYG---NAIFKAVEFNTTDAFQGRECEVIIFSCVRASSH-GIGFLADIR 1763
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
R+NV LTRA+ + +LGN + L + W GL+ +E +G + L Q+ + +P
Sbjct: 1764 RMNVGLTRAKSSLWVLGNSQSLVRGEFWRGLVKDARERNLYTDGDVYKLLQTPQKLLEPN 1823
Query: 840 KI 841
I
Sbjct: 1824 DI 1825
>gi|429965384|gb|ELA47381.1| hypothetical protein VCUG_01150 [Vavraia culicis 'floridensis']
Length = 1568
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 249/473 (52%), Gaps = 66/473 (13%)
Query: 371 EVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRP--ISLIQGPPGTGKT--------- 419
+V +V + + +G LN SQ A+K V P SLI GPPGTGKT
Sbjct: 1116 DVGLVEQVVQKMYG------LNKSQQNAIKHVYMSPSFFSLIHGPPGTGKTKMIVSLIES 1169
Query: 420 VTSAAIVYHMAKQG-----QGQVLVCAPSNVAVDQLAEKISATGLK--------VVRLCA 466
+ +A IV + + + +VL+CAPSN AVD+LA +I+ LK V+R+
Sbjct: 1170 LFNAQIVSVLKSKMFITNREPRVLICAPSNAAVDELARRINDLHLKDRDVKRLQVLRIGV 1229
Query: 467 KSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATER 526
++ + ++ LTL ++ + EK L L E+++S+ K K
Sbjct: 1230 QNN--IDDNLKMLTLDCIIKR-ELEEKRNGMNLMNL-----EVTNSERAKRKC------- 1274
Query: 527 EISQSADVICCTCVGAGDP--RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 584
E+ + ++V+C T + ++AN F ++IDE+ Q+ E LIPL +VVLVGD
Sbjct: 1275 ELLKRSNVVCATLSSSAKELIKVANIDFDILIIDEACQSVETSTLIPLKFNPIKVVLVGD 1334
Query: 585 HCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
QL P ++ K QSLF RL + L VQYRMHP + EFP+ FY L
Sbjct: 1335 PKQLPPTLISK---HKPYEQSLFARLQK-TYPSVLLNVQYRMHPLIVEFPNQYFYRARLL 1390
Query: 645 NGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL- 703
+I +RQ+ P+ P+ F +Q+ EE + + S+ N EA + I++ +
Sbjct: 1391 THKSIQKRQN-----PYENVIPPISF-IQINGEEKTDNCFSFYNIEEAQYIGSIISELME 1444
Query: 704 --RSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
++ ++IG+ITPY+ Q I + ++RQ ++ + V +VD FQG+EKD I++
Sbjct: 1445 QVKNYDFFNKIGIITPYKAQMKKIKEVLL---SIRQDIFDFVCVNTVDGFQGQEKDVILI 1501
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHY 814
S V+S + +GFL+D RR+NV++TRA++ ++I+GN KVLS W +L HY
Sbjct: 1502 STVKS---KNMGFLSDVRRINVSITRAKHSLIIIGNSKVLSSSGAWKSMLNHY 1551
>gi|171684931|ref|XP_001907407.1| hypothetical protein [Podospora anserina S mat+]
gi|170942426|emb|CAP68078.1| unnamed protein product [Podospora anserina S mat+]
Length = 2074
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 245/528 (46%), Gaps = 103/528 (19%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV----YHMAKQGQGQV------- 437
+LN Q A+ + + +L+QGPPGTGKT T A+V + K G V
Sbjct: 1343 QLNLGQAKAILNAKENDGFTLVQGPPGTGKTKTIVAMVGCLLSNSLKGSNGAVSIPRPGL 1402
Query: 438 ------------LVCAPSNVAVDQLA-------EKISATGLKVVRLCAKSREAVSSPVEH 478
LVCAPSN AVD+L + ++ T K+ L +A+++ V+
Sbjct: 1403 TAKPTTAPARKLLVCAPSNAAVDELVLRLKQGVKTMNGTHHKIEVLRLGRTDAINAGVKD 1462
Query: 479 LTLHYQVR----------------------------------HLDTSEKSELHKL-QQLK 503
+TL QV+ LD ++ ++ H+L +LK
Sbjct: 1463 VTLDEQVKARMEAVINSSGPSDREQMHKEAGEIKVKLSELRPQLDAAQAADDHQLMNKLK 1522
Query: 504 DEQGEL-----------------SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPR 546
E +L ++ +++ + +R ++EI A V+C T G+G
Sbjct: 1523 REYDDLMKRRAHIGARIEADKSSGNTFQREVEIKRRQVQQEILDKAQVLCATLSGSGHEM 1582
Query: 547 LANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
N F V+IDE+ Q E LIPL G + +LVGD QL P ++ + AAR G Q
Sbjct: 1583 FKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQ 1642
Query: 605 SLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF-PW- 661
SLF R+ K + L +QYRMHP +S FPS FYEG LQ+G + +G+ PW
Sbjct: 1643 SLFVRMQKNHAKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADM-----AGLRLQPWH 1697
Query: 662 -PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV----VPSQIGVIT 716
V P F+ G + S +N E K+ F RS +IG+IT
Sbjct: 1698 QSVYLGPYRFFDVKGSQSRGPKNQSLVNEEELKVAMKLYQRF-RSDYSNVDARGKIGIIT 1756
Query: 717 PYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+ Q + + + G + + +EIE + D+FQGRE + II SCVR++ GIGF+
Sbjct: 1757 PYKAQLHRLRQRFTDKYG---EGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFM 1813
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG 823
D RR+NV LTRA+ + ILG+ + L + WN L+ KE + G
Sbjct: 1814 TDIRRMNVGLTRAKSSLWILGDSRALQQGEYWNKLIEDAKERDRYTTG 1861
>gi|301613470|ref|XP_002936221.1| PREDICTED: probable helicase senataxin [Xenopus (Silurana)
tropicalis]
Length = 2535
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 283/635 (44%), Gaps = 143/635 (22%)
Query: 386 PGLPELNASQVFAVKS----VLQRP----ISLIQGPPGTGKTVTSAAIVYHM-------- 429
P L E N+ Q +A++ V Q P I LI GPPGTGK+ T ++Y +
Sbjct: 1835 PSLKEYNSDQRYAIEKAYSMVKQHPRLPRICLIHGPPGTGKSKTIVGLLYRILMENGSST 1894
Query: 430 -------AKQGQGQVLVCAPSNVAVDQLAEKI----------------SATGLKVVRLCA 466
AK + +VLVCAPSN A+D L +KI + + +VRL A
Sbjct: 1895 VPVQNLSAKNKRNRVLVCAPSNAALDDLMKKIILEFKEKCHNKNTPLGNCGDINLVRLGA 1954
Query: 467 KSREAVSSPVEHLTLHYQVRHLDT--SEKSELHKLQQLKD-------------------- 504
+ + +SS V +L QV H T + ELHK ++L D
Sbjct: 1955 E--KTISSDVVKFSLDCQVNHRITRAQQDQELHKRKELLDRRLDELSRRRALEKCNKNTC 2012
Query: 505 -----EQGELSSSDEKKYKALK------RATEREISQSADVICCTCVGAGDPRLAN-FR- 551
E LS + +LK + +R I + VICCT +G L + FR
Sbjct: 2013 APLDEEIARLSKERQLLADSLKLVRRRPQELQRTIILESHVICCTLSTSGGILLESAFRQ 2072
Query: 552 -----FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
F V++DE+ Q+ E E LIPL+ ++VLVGD QL P ++ KA G QSL
Sbjct: 2073 LGQEPFSCVIVDEAGQSCEVENLIPLLHRCSKLVLVGDPEQLPPTVISMKAEELGYGQSL 2132
Query: 607 FERLVLL----GLKP--IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
R+ G K + L VQYRMHP + FPS+ FY+ L+ E + S
Sbjct: 2133 MSRMCSFLDSTGTKSPVLHLTVQYRMHPDICLFPSHYFYKRMLKTDRATEEVRCSS---D 2189
Query: 661 WPVPNRP-MFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVIT 716
WP +P M F V G E+ S+ N E A + K++ + + IGVIT
Sbjct: 2190 WPF--QPYMVFDVADGFEQ--KERESFCNPQEIKVAVALIKLIKSRKKEFCF-RNIGVIT 2244
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEI---EVASVDSFQGREKDYIILSCVRSNEHQ-GI 772
PY Q+ I+ LR+ +I EV +VD FQGR+KD II++CVR+N Q GI
Sbjct: 2245 PYRAQKMRIIE------ELRRAFGNDIRPGEVDTVDGFQGRQKDCIIVTCVRANSTQGGI 2298
Query: 773 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSM 832
GFL +RLNV +TRA++ + ILG+ + L + WN L+ + L++ + ++ +
Sbjct: 2299 GFLASRQRLNVTITRAKFSLFILGSLRTLMENKDWNHLIQDAQRRGALIKTREEHYQRDV 2358
Query: 833 VQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLH 892
+ K K + P I PN S P ++ S A
Sbjct: 2359 GKILKLKPVVQ-------RAP-IHPN----SRPEEKQKDSSA------------------ 2388
Query: 893 PAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPV 927
P PR+ P PP +P PSR +H V
Sbjct: 2389 ----PPPRIEPPKETTQPPRKPLPAPSRPVIHPAV 2419
>gi|357121239|ref|XP_003562328.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium
distachyon]
Length = 652
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 152/454 (33%), Positives = 232/454 (51%), Gaps = 42/454 (9%)
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ L+ R + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 202 LDDSQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKRG-SKILACAASNIAVDN 260
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 502
+ E++S K+VRL +R + + S ++ L L + E+ KL +
Sbjct: 261 IVERLSQYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKLLKA 320
Query: 503 KDE------QGELSS--SDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
KD + EL + +E+K + L A ++ ++ADV+ T GA +L F
Sbjct: 321 KDRNTKRDIRKELKTLAKEERKRQQLAVA---DVIKNADVVLSTLTGASSKKLDGITFDL 377
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL-L 613
V+IDE+ QA E C I L+ G + VL GDH QL P I +A + G+ ++LFERL
Sbjct: 378 VIIDEAAQALEVACWIALLKGPR-CVLAGDHLQLPPTIQSVEAEKKGMGKTLFERLTEGY 436
Query: 614 GLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTI---------NERQSSGIDFPWPV 663
G K L +QYRMH + + S Y ++ ++ N +SS +
Sbjct: 437 GDKITSMLTIQYRMHELIMNWSSKELYNNKIKAHSSVAGHMLYDLENVNRSSSTE----- 491
Query: 664 PNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRA 723
P + EE+ S +N EAA + SGV+ S IG+ITPY Q
Sbjct: 492 PTIILIDTTGCDMEEVKDEEESTMNEGEAAVSVAHAKLLVESGVLASDIGIITPYSAQVT 551
Query: 724 YIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNV 783
+ M RN + K++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NV
Sbjct: 552 CL--KMMRN---KDAKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNV 606
Query: 784 ALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
A+TRAR I+ + + +S L+ +++E+
Sbjct: 607 AVTRARRQCCIVCDAETVSNDKFLKRLVEYFEEN 640
>gi|288926626|ref|ZP_06420541.1| DNA helicase [Prevotella buccae D17]
gi|288336595|gb|EFC74966.1| DNA helicase [Prevotella buccae D17]
Length = 634
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 241/460 (52%), Gaps = 40/460 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F P LN +Q AV V++ + ++++ GPPGTGKT T + + + QV+VCA
Sbjct: 179 FAPTRFPWLNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMR-ESQVMVCA 237
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD + EK++ G+ V+R+ SR V+ + L+ Y+ R H D + + K
Sbjct: 238 QSNMAVDWICEKLTDRGINVLRIGNPSR--VNDKM--LSFTYERRFESHPDYPQLWAIRK 293
Query: 499 -LQQLKDEQGELSSSDEKKYKALK-RATEREISQS------ADVICCTCVGAGDPRLANF 550
+++L+ + S +K + LK RA E EI + A VI T VG+ L
Sbjct: 294 TIRELRSRRRRGSGDYHQKMERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDGQ 353
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
++ + IDE+ QA E C IP + A +VVL GDHCQL P + A RAGL ++L ER+
Sbjct: 354 KYATLFIDEAAQALEAACWIP-IRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMERI 412
Query: 611 VLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
V KP L+VQYRM+ + F S+ FY G + + I R D P
Sbjct: 413 V--ENKPEVVTLLKVQYRMNEQIMRFSSDWFYHGEVVSAPQIRHRGILDYDHPMEWKTNS 470
Query: 668 MFFYVQMGQEEISASGTSY-------LNRTEA----ANVEKIVTTFLRSGVVPSQI--GV 714
+ G EE A+G S+ +N+ EA +E+ T + ++ +I G+
Sbjct: 471 LTPSPSSG-EEGEAAGESFVSSSFGRINKGEAELTLGTLEEYFTKIGKRRILDERIDVGI 529
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
I+PY Q Y+ + + + Y++ I V +VD FQG+E+D I++S VRSN+ IG
Sbjct: 530 ISPYRAQVQYLRQLIRKREFFKP--YRQCITVNTVDGFQGQERDIILISLVRSNDEGQIG 587
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
FL D RR+NVA+TRAR ++ILG+ L + P + L +
Sbjct: 588 FLRDLRRMNVAITRARMKLIILGDVSTLGRHPFYKKLWEY 627
>gi|50546118|ref|XP_500586.1| YALI0B06897p [Yarrowia lipolytica]
gi|49646452|emb|CAG82817.1| YALI0B06897p [Yarrowia lipolytica CLIB122]
Length = 649
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 242/445 (54%), Gaps = 44/445 (9%)
Query: 391 LNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQV AV+ SV ++++ GPPGTGKT T I+ + ++ +VLVC PSN++VD
Sbjct: 186 LNPSQVEAVQHSVGSAQVTVVHGPPGTGKTHTLVEIIRQLVQKKGQRVLVCGPSNISVDT 245
Query: 450 LAEKISA--TGLKVVRLCAKSREAVSSPVEHLTLHYQ-------VRHLDTSEKSELHKLQ 500
L E++ G +++R+ +R ++ L + + V+ + + +L K+
Sbjct: 246 LLERLHPHFNGNQLLRIGHPARLLEANLQHSLDIVSKTCDSGQIVKDVQVNIDQQLRKIS 305
Query: 501 QLKDEQGELSSSDE-----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
+ K + + + E K++K ++ ++ A V+C T G GD L + +F +
Sbjct: 306 KTKSGREKYAMYKEIGMLRKEFKERQKKVVADLLLQAKVVCATLHGTGDSCLKDVQFDTI 365
Query: 556 LIDESTQATEPECLIPLVL--GAKQVVLVGDHCQLGPVIMCKKAA-RAGLAQSLFERLVL 612
+IDE +Q+ EP+C IP+ A+++++ GD+ QL P + C+++ + L +LF+ LV
Sbjct: 366 IIDEISQSLEPQCWIPISRYPSAQKLIIAGDNQQLPPTVKCEQSKIKKQLELTLFDHLVG 425
Query: 613 LGLKPIR--LQVQYRMHPSLSEFPSNSFYEG-----------TLQNGVTINERQSSGIDF 659
IR L+VQYRMH ++ +FPS Y G TL + + E +
Sbjct: 426 -NYDNIRRLLKVQYRMHDAIMQFPSQELYGGQLVAHSSVARHTLADLPHVTEDYETTTPV 484
Query: 660 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
W + + FY Q ++E S LN +EA V + V L GV+ S+IGVITPY
Sbjct: 485 VW-IDTQGDDFYEQ--EDESGKLNPSRLNDSEAYLVRRHVGKLLDLGVLESEIGVITPYS 541
Query: 720 GQRAYIVNYMS-RNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q + I + + N A +EVA+VDSFQGREK+ +ILS VRSNE+ IGFL +
Sbjct: 542 AQASLIRSLIHPTNPA--------VEVATVDSFQGREKEAVILSLVRSNENHEIGFLGEY 593
Query: 779 RRLNVALTRARYGIVILGNPKVLSK 803
RRLNVA+TR R + ++GN + L++
Sbjct: 594 RRLNVAMTRPRRHLCVVGNMETLAR 618
>gi|315607147|ref|ZP_07882151.1| helicase [Prevotella buccae ATCC 33574]
gi|315251201|gb|EFU31186.1| helicase [Prevotella buccae ATCC 33574]
Length = 634
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 241/460 (52%), Gaps = 40/460 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F P LN +Q AV V++ + ++++ GPPGTGKT T + + + QV+VCA
Sbjct: 179 FAPTRFPWLNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMR-ESQVMVCA 237
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD + EK++ G+ V+R+ SR V+ + L+ Y+ R H D + + K
Sbjct: 238 QSNMAVDWICEKLTDRGINVLRIGNPSR--VNDKM--LSFTYERRFESHPDYPQLWAIRK 293
Query: 499 -LQQLKDEQGELSSSDEKKYKALK-RATEREISQS------ADVICCTCVGAGDPRLANF 550
+++L+ + S +K + LK RA E EI + A VI T VG+ L
Sbjct: 294 TIRELRSRRRRGSGDYHQKLERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDGQ 353
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
++ + IDE+ QA E C IP + A +VVL GDHCQL P + A RAGL ++L ER+
Sbjct: 354 KYATLFIDEAAQALEAACWIP-IRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMERI 412
Query: 611 VLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
V KP L+VQYRM+ + F S+ FY G + + I R D P
Sbjct: 413 V--ENKPEVVTLLKVQYRMNEQIMRFSSDWFYHGEVVSAPQIRHRGILDYDHPMEWKTNS 470
Query: 668 MFFYVQMGQEEISASGTSY-------LNRTEA----ANVEKIVTTFLRSGVVPSQI--GV 714
+ G EE A+G S+ +N+ EA +E+ T + ++ +I G+
Sbjct: 471 LTPSPSSG-EEGEAAGESFVSSSFGRINKGEAELTLGTLEEYFTKIGKQRILDERIDVGI 529
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
I+PY Q Y+ + + + Y++ I V +VD FQG+E+D I++S VRSN+ IG
Sbjct: 530 ISPYRAQVQYLRQLIRKREFFKP--YRQCITVNTVDGFQGQERDIILISLVRSNDEGQIG 587
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
FL D RR+NVA+TRAR ++ILG+ L + P + L +
Sbjct: 588 FLRDLRRMNVAITRARMKLIILGDVSTLGRHPFYKKLWEY 627
>gi|402304960|ref|ZP_10824023.1| AAA domain protein [Prevotella sp. MSX73]
gi|400380746|gb|EJP33559.1| AAA domain protein [Prevotella sp. MSX73]
Length = 621
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 241/460 (52%), Gaps = 40/460 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F P LN +Q AV V++ + ++++ GPPGTGKT T + + + QV+VCA
Sbjct: 166 FAPTRFPWLNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMR-ESQVMVCA 224
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD + EK++ G+ V+R+ SR V+ + L+ Y+ R H D + + K
Sbjct: 225 QSNMAVDWICEKLTDRGINVLRIGNPSR--VNDKM--LSFTYERRFESHPDYPQLWAIRK 280
Query: 499 -LQQLKDEQGELSSSDEKKYKALK-RATEREISQS------ADVICCTCVGAGDPRLANF 550
+++L+ + S +K + LK RA E EI + A VI T VG+ L
Sbjct: 281 TIRELRSRRRRGSGDYHQKLERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDGQ 340
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
++ + IDE+ QA E C IP + A +VVL GDHCQL P + A RAGL ++L ER+
Sbjct: 341 KYATLFIDEAAQALEAACWIP-IRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMERI 399
Query: 611 VLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
V KP L+VQYRM+ + F S+ FY G + + I R D P
Sbjct: 400 V--ENKPEVVTLLKVQYRMNEQIMRFSSDWFYHGEVVSAPQIRHRGILDYDHPMEWKTNS 457
Query: 668 MFFYVQMGQEEISASGTSY-------LNRTEA----ANVEKIVTTFLRSGVVPSQI--GV 714
+ G EE A+G S+ +N+ EA +E+ T + ++ +I G+
Sbjct: 458 LTPSPSSG-EEGEAAGESFVSSSFGRINKGEAELTLGTLEEYFTKIGKQRILDERIDVGI 516
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
I+PY Q Y+ + + + Y++ I V +VD FQG+E+D I++S VRSN+ IG
Sbjct: 517 ISPYRAQVQYLRQLIRKREFFKP--YRQCITVNTVDGFQGQERDIILISLVRSNDEGQIG 574
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
FL D RR+NVA+TRAR ++ILG+ L + P + L +
Sbjct: 575 FLRDLRRMNVAITRARMKLIILGDVSTLGRHPFYKKLWEY 614
>gi|331213013|ref|XP_003307776.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298179|gb|EFP74770.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 2157
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 246/523 (47%), Gaps = 114/523 (21%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV--YHMAKQGQG----------- 435
++N Q A+ S L P SLIQGPPGTGKT T ++ + ++ G
Sbjct: 1429 KVNEPQGRAIISALATPGFSLIQGPPGTGKTSTIVGLIGAFIASRPKVGDPAGGGKQPSI 1488
Query: 436 --QVLVCAPSNVAVDQLAEKIS-----ATGL----KVVRLCAKSR--------------- 469
++L+CAPSN AVD++A+++ A G K+VR+ A S+
Sbjct: 1489 TRKILLCAPSNAAVDEVAKRLKEGVRGAQGELIIPKLVRIGADSKVNLAVKDIFIDELVA 1548
Query: 470 ------------EAVSSPVEHL-TLHYQVRHL-DTSEKSELH------------------ 497
E V+ + L Q+ L DT + ++
Sbjct: 1549 AMSKDAEPGKAAETVAGAAGAIQDLRQQLSELRDTRDSKQMEAERLPTESPQYRTLQEEV 1608
Query: 498 -----KLQQL--KDEQGELSSSDEKKY-KALKRATEREISQSADVICCTCVGAGDPRLAN 549
K+ +L K +Q K+Y A R +I Q ADV+C T G+G ++
Sbjct: 1609 TRIRRKIHELSAKIDQARDQQDASKRYLDAATRKLRMQILQDADVVCSTLSGSGHDYMSQ 1668
Query: 550 --FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
F F V+IDE+ Q EP LIPL A Q +LVGD QL P ++ + A++AG QSLF
Sbjct: 1669 LPFDFETVVIDEACQCVEPASLIPLRYNATQCILVGDPMQLPPTVLSQTASQAGYDQSLF 1728
Query: 608 ERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER-----QSSGIDFPW 661
R+ L +QYRMHPS+S FPS +FY+ L +G + + SG FP
Sbjct: 1729 VRMQRNAPDVAHLLSIQYRMHPSISTFPSKAFYDSKLLDGPEMESKAVQPWHQSGSLFP- 1787
Query: 662 PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQ 721
P FY +G E + S +NRTEA+ V+ + R I + +
Sbjct: 1788 -----PYAFYHPVGAREERGAHHSLMNRTEASLA---VSIYWRIANDYPHID----FAYR 1835
Query: 722 RAYIVNYMSRNGALRQQLYKE--------IEVASVDSFQGREKDYIILSCVR-----SNE 768
I Y ++ G +R+QL + I+V +VD FQG+EKD IILSCVR +N
Sbjct: 1836 VGIITGYAAQVGEIRRQLRAKFPASTVAAIDVNTVDGFQGQEKDIIILSCVRGGRDDNNS 1895
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
GIGFL D RR+NVALTRA+ + I+GN VLS+ P W L+
Sbjct: 1896 GGGIGFLKDIRRMNVALTRAKSSMFIIGNRAVLSQDPTWKALV 1938
>gi|405963672|gb|EKC29228.1| hypothetical protein CGI_10027441 [Crassostrea gigas]
Length = 2793
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 166/502 (33%), Positives = 244/502 (48%), Gaps = 76/502 (15%)
Query: 386 PGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVY-------HMAKQGQG--Q 436
P + N Q A+K L +LI GPPGTGKT T +VY M ++G Q
Sbjct: 1275 PNIVSNNEYQKNAIKKALTSTFTLIHGPPGTGKTYTGTKLVYLFDKINSRMQEEGHAKMQ 1334
Query: 437 VLVCAPSNVAVDQLAE----KISATGLKVVRLC-------------------AKSREAVS 473
++ C P+N +VD +A K +VR+ A +REA
Sbjct: 1335 LVFCGPNNKSVDLVARWMHLKYGNECPDIVRIYGNSLENKDFPTLGKYFSKRASAREAKP 1394
Query: 474 SP-VEHLTLHYQVRHLDTSEKSELHKL----QQLKDEQGELSSSDEKKY-KALKRATERE 527
P +E +++H +R D ++ K Q+ D Q E + D KKY K + A++ E
Sbjct: 1395 DPQLEGISVHRLIRLKDKPYAEKIRKFDEMFQKYNDGQYEPTLEDLKKYRKIISEASQEE 1454
Query: 528 ISQSADVICCTCVGAGDPRLANF---RFRQVLIDESTQATEPECLIPLV-LGAKQVVLVG 583
+ Q + VI CT A PR R +Q++IDE+ TEPE + ++ A+QVVL+G
Sbjct: 1455 LKQHS-VIFCTTAVATSPRFIKATSGRIQQLIIDEAGMCTEPESIAAIIATKAQQVVLIG 1513
Query: 584 DHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTL 643
DH QL PV+ AA GL +SLFER + LQ+QYRMHP + EFPSN FY+G L
Sbjct: 1514 DHKQLRPVLKSNYAAELGLEKSLFERY---SDRAKMLQIQYRMHPGICEFPSNEFYDGKL 1570
Query: 644 QNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEE---ISA---SGTSYLNRTEAANVEK 697
Q G + + + N P+ F G+EE +SA + S N+ E V K
Sbjct: 1571 QTGSSPKWDIQNPLKIWINRDNIPIVFCHVEGEEEYLTVSAEEGNEQSCSNKQEVEKVVK 1630
Query: 698 IVTTFLR-SGVVPSQ---IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQG 753
I+ L G+ S + +++ Y Q I +S + + + V +V + QG
Sbjct: 1631 ILKHLLEHEGLDLSDKENLNIMSQYNAQCHQIRLAVS-------DIAENVNVNTVVASQG 1683
Query: 754 REKDYIILSCVRSNEH-------------QGIGFLNDPRRLNVALTRARYGIVILGNPKV 800
E +Y+I S VRS + +GF++D ++NVALTRAR G++I+GN +
Sbjct: 1684 GEWNYVIFSTVRSLPRYRIEKKPTLGWCKKSLGFISDEHQINVALTRARRGLIIIGNKYL 1743
Query: 801 LSKQPLWNGLLTHYKEHECLVE 822
LS P+W L+ HY C+VE
Sbjct: 1744 LSSDPVWKNLIYHYARLGCVVE 1765
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 704 RSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSC 763
R V P QI VI+ Y Q + I A++++ + V +V + QG E DY+I S
Sbjct: 2643 REKVNPRQINVISQYNAQCSAI------KEAMKKEKFINYNVNTVVASQGGEWDYVIFST 2696
Query: 764 VRSNE-------------HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
VRS Q +GF+ D ++NVALTRAR G++I+GN ++ +W L
Sbjct: 2697 VRSLPDYRIEPNPTFGWCKQNLGFITDQHQINVALTRARKGLIIIGNKNLMKCDKVWKEL 2756
Query: 811 LTHYKEHECLVEG 823
L HY C+V+
Sbjct: 2757 LEHYGRQGCVVDA 2769
>gi|307173791|gb|EFN64578.1| Helicase sen1 [Camponotus floridanus]
Length = 1634
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 239/513 (46%), Gaps = 115/513 (22%)
Query: 391 LNASQVFAV----KSVLQR--PISLIQGPPGTGKTVTSAAIVYHM-----AKQGQGQVLV 439
LN Q+ AV K+VL++ + IQGPPGTGK+ +V + + ++L+
Sbjct: 1126 LNPKQMEAVYKVTKTVLKKENKLCFIQGPPGTGKSKVIVNLVSQILYSEHTNRKTLRILI 1185
Query: 440 CAPSNVAVDQ------------------------------LAEKISATGLKVVRLCAKSR 469
CAPSN A+D+ +A+ IS T L L S+
Sbjct: 1186 CAPSNAAIDEIVLRLLNVRSKLKKNRFNMVRIGRMESMHLMAKPISVTELGKRHLTKISQ 1245
Query: 470 EAV-SSPVEHLT-LHYQVRHLDTSEKSELHKLQQLKDEQ--------------------- 506
EAV S E L L ++ L K+EL LQQ KDE
Sbjct: 1246 EAVYSDNTEELAILEAKINSL----KAELSSLQQ-KDEDKKKEIRRRLMETLMRYELVKC 1300
Query: 507 ----GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF------RFRQVL 556
E SS D KY +R E I AD+I CT ++ + R +
Sbjct: 1301 GKPINEFSSKDRTKY---QRMAENIILTGADIIACTLSSCYTNQMESIFGGYKERISVCI 1357
Query: 557 IDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL--VLLG 614
+DE+TQ+ E E LIPL+LG K +VLVGD QL ++ ++A + L QS+F R+ V
Sbjct: 1358 VDEATQSCEAETLIPLMLGVKTLVLVGDPNQLPATVLSQRAKKLKLDQSVFSRIQNVFTS 1417
Query: 615 LKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY 671
+ I L +QYRM ++S +P+ FY+G L+N IDF P F
Sbjct: 1418 QQNNPIIMLNMQYRMDYAISYWPNKYFYDGKLKN----------SIDFRMKFP----FHS 1463
Query: 672 VQMGQEEISASGTSYLNRTEAANVEKIVTTFLR----SGVVPSQIGVITPYEGQRAYIVN 727
++ + + N EA + K + L V P +GV+TPY QR ++N
Sbjct: 1464 YRILDHNFKQNEDKFSNTIEAEFIAKTILAMLTFTNWENVNPISLGVLTPYNNQRTLVLN 1523
Query: 728 YMSRN-----GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
++ LR ++ EV +VDSFQG+E+D II+SCVRS GIGFL+D +RL
Sbjct: 1524 KINEKISSIPDNLRNKI--SFEVNTVDSFQGQERDIIIMSCVRS---HGIGFLSDRQRLC 1578
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
VALTRA+Y +++ GN K +WN LL+ K
Sbjct: 1579 VALTRAKYSLILCGNFNTFLKDKMWNALLSDAK 1611
>gi|260593445|ref|ZP_05858903.1| putative helicase [Prevotella veroralis F0319]
gi|260534561|gb|EEX17178.1| putative helicase [Prevotella veroralis F0319]
Length = 646
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 248/467 (53%), Gaps = 39/467 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F LP LN +Q AV VL + ++++ GPPGTGKT T + + + QVLVCA
Sbjct: 188 FAPIRLPWLNPTQEKAVNEVLWAKDVAIVHGPPGTGKTTTMVEAINETLMR-ESQVLVCA 246
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSELHK-L 499
SN+AVD ++EK+ G+ V+R+ +R V+ + T + H D + + K +
Sbjct: 247 QSNMAVDWISEKLVDRGINVLRIGNPTR--VNDKMLGFTYERKFEAHPDYPQLWSIRKAI 304
Query: 500 QQLKDEQGELSSSDEKKYKALK-RATEREISQSAD------VICCTCVGAGDPRLANFRF 552
++L++ + S + +K + LK RATE EI +++ VI T VGA + +F
Sbjct: 305 RELRNHRKRSSENYHQKMERLKSRATELEIRINSELFGEARVIASTLVGANSRVMEGQKF 364
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 612
+ IDE+ QA E C IP + A +V+ GDHCQL P + A AGL ++L ER+V
Sbjct: 365 TTLFIDEAAQALEAACWIP-IRRASRVIFAGDHCQLPPTVKSLAALHAGLGKTLMERVV- 422
Query: 613 LGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--W-PVPNR 666
KP L+VQYRM+ + F SN FY G +++ I R D P W +
Sbjct: 423 -ENKPEVVTLLKVQYRMNEEIMRFSSNWFYGGQVESAPQIKYRGILDYDNPMVWIDTSDS 481
Query: 667 PMFFYVQMGQEEISA------SGTSY--LNRTEAA-NVEKIVTTFLRSG---VVPSQI-- 712
+ + GQ E + G S+ +N+ EA ++ + + F + G ++ +I
Sbjct: 482 SLENQSEGGQNEDKSIFKEQFVGESFGRINKGEAELTLQTLQSYFTKIGKQRILDERIDV 541
Query: 713 GVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQG 771
GVI+PY Q Y+ + + + Y+ I V +VD FQG+E+D I++S VRSN+
Sbjct: 542 GVISPYRAQVQYLRGLIKKREFFKP--YRSLISVNTVDGFQGQERDVILISLVRSNDAGQ 599
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFL D RR+NVA+TRAR ++ILGN + +++ P + L ++ E
Sbjct: 600 IGFLRDLRRMNVAITRARMKLIILGNVQTMTQHPFYKKLWESIEQAE 646
>gi|223478666|ref|YP_002583052.1| DNA helicase [Thermococcus sp. AM4]
gi|214033892|gb|EEB74718.1| DNA helicase [Thermococcus sp. AM4]
Length = 660
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 251/507 (49%), Gaps = 94/507 (18%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LNASQ A+ L P LI GP GTGKT T ++ +G +VL A SNVAVD
Sbjct: 175 LNASQRRAIAKALGSPDFFLIHGPFGTGKTRTLVELIRQEVARGH-RVLATAESNVAVDN 233
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHY---------QVRHL-----------D 489
L E++ +GLKVVR+ SR VS + TL Y ++R L D
Sbjct: 234 LVERLVDSGLKVVRVGHPSR--VSKKLHETTLAYLMTQHELYGELRELRVIGENLKEKRD 291
Query: 490 TSEK-----------SELHKL-------------------QQLK-DEQGELSSSDEKKYK 518
T K ++ +L Q LK +EQ + + D +K
Sbjct: 292 TFTKPAPKYRRGLTDRQILRLAEKGIGTRGVSARLIREMAQWLKINEQVQKTFDDARK-- 349
Query: 519 ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
L+ REI + ADV+ T AG + + +IDE+TQAT P LIP + A++
Sbjct: 350 -LEERIAREIIREADVVLTTNSSAGLEVVDYGSYDVAVIDEATQATIPSVLIP-INRARR 407
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNS 637
VL GDH QL P I+ +KA L+++LFE L+ K L VQYRM+ L EFPS
Sbjct: 408 FVLAGDHRQLPPTILSEKAKE--LSKTLFEGLIERYPGKSEMLTVQYRMNERLMEFPSRE 465
Query: 638 FYEGTLQ-----NGVTINERQSSGIDFP-----WPVPNRP---MFFYVQMGQE---EISA 681
FY+G ++ G+T+ + G+ P W +P + F G+E E
Sbjct: 466 FYDGRIEADESVRGITLAD---LGVKSPEEGDAWAKVLKPENVLVFIDTAGREDRFERQR 522
Query: 682 SGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLY 740
G+ S N EA V++ V L GV P IGVI+PY+ QR I + +
Sbjct: 523 YGSESRENPLEARLVKEAVEGLLSLGVKPEWIGVISPYDDQRDLISSLLP---------- 572
Query: 741 KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKV 800
+EIEV +VD +QGREK+ I+LS VRSN +GFL D RRLNV+LTRA+ ++++G+
Sbjct: 573 EEIEVKTVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRRLNVSLTRAKRKLILIGDSST 632
Query: 801 LSKQPLWNGLLTHYKEHECLVEGPLNN 827
LS P + L+ +E E V PLN+
Sbjct: 633 LSSHPTYKRLVEFVRERETYV--PLNS 657
>gi|409079006|gb|EKM79368.1| hypothetical protein AGABI1DRAFT_91927 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1901
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 174/570 (30%), Positives = 257/570 (45%), Gaps = 119/570 (20%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIV-YHMAKQ---------GQG---- 435
+N Q AV KS+ SLIQGPPGTGKT T +V ++K+ G+G
Sbjct: 1273 INEPQAIAVLKSMATNGFSLIQGPPGTGKTSTICGLVSLALSKRNRPAVPIQIGKGPTER 1332
Query: 436 ----QVLVCAPSNVAVDQLAEKIS---------ATGLKVVRL------------------ 464
+VL+CAPSN A+D++A +I +KVVR+
Sbjct: 1333 PPLPKVLLCAPSNAAIDEIARRIKDGYRGPEKRGEAIKVVRIGTEQSMNSSVKDVSLDHL 1392
Query: 465 -------------------CAKSREAVSSPVEHL--------------TLHYQVRHLDTS 491
K E + + L T+ ++ L+
Sbjct: 1393 VDLEIDPPNSGDSSGEIITIRKELEGIRVKKDQLHRKLEEDPNTAQLATIQSEIAQLNAR 1452
Query: 492 EKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR 551
S ++ +LKDEQ S + AL+R+T ++I ADVIC T GAG +
Sbjct: 1453 RSSLAGRMDRLKDEQKSAS----RTLDALRRSTRQKILLEADVICSTLSGAGHEIIERLD 1508
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F +++DES QA E LIPL ++ +LVGD QL P ++ ++A++ QSLF R+
Sbjct: 1509 FDMIIVDESAQAIELSTLIPLKYSCQRCILVGDPQQLPPTVLSQEASKYRYNQSLFVRMQ 1568
Query: 612 LLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR---P 667
+ L +QYRMHP +S+ PS+ FY+G L +G ++ E+ + PW
Sbjct: 1569 RSQPDAVHLLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQ----PWHKNAHFGIY 1624
Query: 668 MFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR--------SGVVPSQIGVITPYE 719
FF V G EE+S L A V F R + ++G+++ Y
Sbjct: 1625 KFFNVSKGLEEMSRHSIKNLAECHVA-----VALFNRLRREYGQDMSDIDYRVGIVSMYR 1679
Query: 720 GQRAYIV-NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE-HQGIGFLND 777
Q A + + R G +++ ++ +VD FQG+EKD IILSCVR+ Q +GFL+D
Sbjct: 1680 AQIAELKRQFEQRFG---KEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGFLSD 1736
Query: 778 PRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQ 836
RR+NVALTRA+ + ILGN L + P W ++ + LVE F
Sbjct: 1737 VRRMNVALTRAKSSLYILGNAATLERSDPNWRKIVGDARGRSRLVEA-------DHTYFI 1789
Query: 837 KPKKIYNDRRLFFGAGPGIVPNDISTSNPN 866
KP NDR P +P +I S P+
Sbjct: 1790 KPISTLNDRH--GPKSPKSIPEEIPQSLPD 1817
>gi|313674250|ref|YP_004052246.1| DNA helicase [Marivirga tractuosa DSM 4126]
gi|312940948|gb|ADR20138.1| DNA helicase [Marivirga tractuosa DSM 4126]
Length = 655
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 249/486 (51%), Gaps = 81/486 (16%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN+ Q + ++++ I LI GPPGTGKT T + ++ + + G+ +VLV APSN AVD
Sbjct: 180 LNSKQQEIINQALVTNDIFLIHGPPGTGKTTTLSYLIKSLFEGGK-KVLVTAPSNTAVDN 238
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSEL-HKLQQLKDEQG 507
+ EK+ + R+ R + + +L+L Q++ H D + + + + +Q LK EQ
Sbjct: 239 ILEKLQNLEIPSTRIGNPIR--MDENLLNLSLDVQLQDHPDYQQANGIWNAIQVLKKEQN 296
Query: 508 E-----------LS-------SSDEKKYKALKRATEREIS-------------------- 529
E LS +S +K Y+ ++ A R+++
Sbjct: 297 EYIPASGQNRRGLSDNKIIQLASSKKPYRGIQSAKLRKMAKWIKIQQQINKNYEQAQALQ 356
Query: 530 --------QSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
+ + VIC T AG L + F V IDE+TQ+TEPE LIPLV G K V L
Sbjct: 357 LSAIESILEQSPVICATNSSAGSELLKDIIFDVVCIDEATQSTEPEALIPLVKGRKWV-L 415
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLV--LLGLKPIRLQVQYRMHPSLSEFPSNSFY 639
GDH QL P + +A+ L+ SLFER L + L +QYRMH + F + +FY
Sbjct: 416 AGDHQQLPPTVKSSEAS--DLSISLFERFQKELPANRSNILTIQYRMHQEIMRFSNENFY 473
Query: 640 EGTLQNGVTINERQSS---GID-FPWPVP-------NRPMFFYV--QMGQEEISASGTSY 686
+ L+ ++ + + G D FP+ P + P +V + G EE A S+
Sbjct: 474 QKKLKAHPSVAKHSLADLPGFDPFPYVNPALEKVVQSSPAVVFVPCEQGVEEQLADSHSW 533
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK-EIEV 745
N+ E A ++I L S + P IG+I+PY+ Q +SR L+ L +E+
Sbjct: 534 FNKAEIALTKEITDALLSSRLFPEDIGIISPYDQQ-------VSR---LKSDLKDYHVEI 583
Query: 746 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 805
S+D FQGREK+ II+S VRSN + IGFL D RRLNVALTRA+ ++I+G+P L P
Sbjct: 584 KSIDGFQGREKEVIIISLVRSNLKEDIGFLRDYRRLNVALTRAKRKLIIIGSPFTLQSNP 643
Query: 806 LWNGLL 811
++ L+
Sbjct: 644 IYKSLI 649
>gi|440800551|gb|ELR21587.1| DNAbinding protein SMUBP-2, putative [Acanthamoeba castellanii str.
Neff]
Length = 799
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 212/386 (54%), Gaps = 17/386 (4%)
Query: 447 VDQLAEKISATGLKVVRLCAKSREAV-SSPVEHLTLHYQVRHLDTSE-KSELHKLQQLKD 504
++Q+ +KISA ++ L + E++ SS LT + SE + EL +L K
Sbjct: 409 LEQVLKKISALQTELTDLRKRREESLASSGGLGLTPDEKAEFAKESELRRELTELHNGKA 468
Query: 505 EQG-ELSSSDE--KKY----KALKRATEREISQSADVICCTCVGAGDPRLANFR--FRQV 555
+ G E+S E KKY L++ E +I D++ T G+G L++ F V
Sbjct: 469 KLGKEISRFHETRKKYGSRVSKLRKQMELQILNETDIVLTTLSGSGSDILSHMSHGFETV 528
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL 615
+IDE+ QA E LIPL ++ +LVGD QL ++ + A+ AQSLF+RL G
Sbjct: 529 VIDEAAQAVEMATLIPLKYDCRRCILVGDPNQLPATVISQAASSFLYAQSLFQRLQKAGH 588
Query: 616 KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV-PN-RPMFFY-V 672
I L VQYRMHP + EFPS FY+ L +G I+ QS + P+ P+ +P FY +
Sbjct: 589 PVIMLDVQYRMHPLIREFPSKHFYDNRLTDGPNIDTSQSGLYNQPYHADPSFQPFLFYDL 648
Query: 673 QMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRN 732
G EE A G SY+N EA ++ L S + GVITPY+ Q Y + +
Sbjct: 649 CKGVEEQGARGQSYVNPAEATFCLQLFQD-LCSRFPHIESGVITPYKQQ--YFLLQRTFA 705
Query: 733 GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 792
AL + Y I++ ++D FQGREKD II SCVR++E +GIGFL+D RR+NVALTRA++G+
Sbjct: 706 AALDKATYSAIDINTIDGFQGREKDVIIFSCVRAHETKGIGFLSDIRRMNVALTRAKFGL 765
Query: 793 VILGNPKVLSKQPLWNGLLTHYKEHE 818
++G L P W L+ H KE +
Sbjct: 766 FVVGKSTALLNNPHWGALVNHAKEKQ 791
Score = 47.0 bits (110), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 23/88 (26%)
Query: 385 APGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVT------SAAIVYHMAKQGQGQ-- 436
AP L L S F L+QGPPGTGKT T S+ I+ +++ Q
Sbjct: 281 APTLASLCESDSFV----------LLQGPPGTGKTKTILGILSSSLIMSRLSQATQTDPN 330
Query: 437 -----VLVCAPSNVAVDQLAEKISATGL 459
VLVCAPSN AVD++ ++ GL
Sbjct: 331 NKRNPVLVCAPSNAAVDEICMRLLEDGL 358
>gi|317150187|ref|XP_001823850.2| tRNA-splicing endonuclease [Aspergillus oryzae RIB40]
Length = 2103
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 173/594 (29%), Positives = 273/594 (45%), Gaps = 123/594 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM-----AKQG----------- 433
+N +Q A+KS L +LIQGPPG+GKT T A+V + QG
Sbjct: 1289 VNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTGVGN 1348
Query: 434 ---------QGQVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSP 475
++LVCAPSN AVD+L + A L V+RL +A+++
Sbjct: 1349 IKPPPRTTTSKKLLVCAPSNAAVDELVMRFKAGVKTIQGRHEKLSVIRL--GRSDAINTN 1406
Query: 476 VEHLTL------------------------HYQVRHLDTSEKSELHKLQQLKDEQGELSS 511
V +TL + + + DT+ K KL Q + + + +
Sbjct: 1407 VLDVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSKLDQCRAQGLPVPA 1466
Query: 512 SDEKKYKALK----------------------------RATEREISQSADVICCTCVGAG 543
E++++ LK R ++EI A VIC T G+G
Sbjct: 1467 ELEREFELLKKKKTALSQEIDNARDKNHSAARDADLNRRKIQQEIIDGAHVICATLSGSG 1526
Query: 544 DPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1527 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1586
Query: 602 LAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
QSLF R+ + + L +QYRMHP +S +P N+FY+G LQ+G + ++ P
Sbjct: 1587 YEQSLFVRMQSNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRAR----P 1642
Query: 661 WPVPN--RPMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGV 714
W P F+ G + +A G S +N R E++V+ F + +IG+
Sbjct: 1643 WHQSELLSPYRFFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDF-QGFDFSGKIGI 1701
Query: 715 ITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+GQ R ++ ++ G ++ I+ + D+FQGRE + II SCVR++ ++GIG
Sbjct: 1702 ITPYKGQLRELKTHFAAKYG---NAIFNMIDFNTTDAFQGRESEVIIFSCVRAS-NKGIG 1757
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
FL+D RR+NV LTRA+ + +LGN + L + WN L+ + +G + +
Sbjct: 1758 FLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRRSVYTDGDVLKI----- 1812
Query: 834 QFQKPKKI-YNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYM-PPGPPNG 885
Q+P+ Y + + GP ++ P+ D + Y+ PP P+G
Sbjct: 1813 -LQRPQFTGYKNVDMLDADGP-------ESTKPSVDGTFGKNEPYVSPPEGPSG 1858
>gi|340975658|gb|EGS22773.1| 5'-3' RNA helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1993
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 245/533 (45%), Gaps = 101/533 (18%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV---------------YHMAKQG 433
+LN Q A+ + + +LIQGPPGTGKT T A+V +++ G
Sbjct: 1317 QLNPGQARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSNTGAVQISRPG 1376
Query: 434 QG---------QVLVCAPSNVAVDQLAEKISA-------TGLKVVRLCAKSREAVSSPVE 477
G ++LVCAPSN AVD+L ++ A T K+ L + +++ V+
Sbjct: 1377 AGPTNGTAPSKKLLVCAPSNAAVDELVLRLKAGVKTMNGTFHKIEVLRLGRSDVINAAVK 1436
Query: 478 HLTLHYQVR-HLDT--------SEKSELHK------------------------------ 498
+TL V+ +D SE+ +LHK
Sbjct: 1437 DVTLDELVKARMDAELSKNSSPSERDQLHKEAGEIKAKLAEIRPQLDAARLSDDRASAMK 1496
Query: 499 ----LQQLKDEQGELSSSDE----------KKYKALKRATEREISQSADVICCTCVGAGD 544
+LK Q + + + ++ + +R ++EI A V+C T G+G
Sbjct: 1497 LQREFDELKRRQAHIGAKIDADKASGNTYARETEIKRRQIQQEILDKAQVLCATLSGSGH 1556
Query: 545 PRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
N F V+IDE+ Q E LIPL G + +LVGD QL P ++ + AA+ G
Sbjct: 1557 EMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCNKCILVGDPKQLPPTVLSQSAAKYGY 1616
Query: 603 AQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
QSLF R+ K + L +QYRMHP +S FPS FYEG LQ+G + + PW
Sbjct: 1617 DQSLFVRMQKNHPKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADMARLRLQ----PW 1672
Query: 662 --PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF---LRSGVVPSQIGVIT 716
V P F+ G +E S +N E ++ F R + +IG+IT
Sbjct: 1673 HQSVLLGPYRFFDVKGSQERGPKNQSLVNEEEVKVAMQLYMRFRSDYRDIDLTGKIGIIT 1732
Query: 717 PYEGQRAYI-VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+ Q + ++ R G + + ++IE + D+FQGRE + II SCVR++ GIGF+
Sbjct: 1733 PYKAQLQRLRQKFVERYG---ESITEQIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFM 1789
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL 828
D RR+NV LTRAR + ILG+ + L + W L+ K+ + G + L
Sbjct: 1790 TDIRRMNVGLTRARSSLWILGDSRALVQGEFWAKLIEDAKQRDRYTNGNIMAL 1842
>gi|302689419|ref|XP_003034389.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
gi|300108084|gb|EFI99486.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
Length = 1958
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 246/532 (46%), Gaps = 93/532 (17%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVT----SAAIVYHMAKQ---------GQGQ 436
+N Q A+ KS+ + SLIQGPPGTGKT T +A +Y ++ Q +
Sbjct: 1302 VNEPQAVAITKSIHTKGFSLIQGPPGTGKTSTICGLVSAYLYEANRRITRPMENDPNQPR 1361
Query: 437 VLVCAPSNVAVDQLAEKIS------ATGLKVVRLCAKSREAVSSPVEHLT---------- 480
+L+CAPSN A+D++A ++ A L VVR+ A+ +A+ V+ +T
Sbjct: 1362 ILLCAPSNAAIDEVAFRLKCSPAAVAGKLNVVRIGAE--KAIGDAVKDITLDTLADKKLN 1419
Query: 481 ------------LHYQVRHLDTSE------------------------------KSELHK 498
L R L+ ++ KS H+
Sbjct: 1420 VSTTNTENVEGELSSLFRELNAAKHEINAKQKELAQIVDNSARAQTLSDELRMLKSRRHQ 1479
Query: 499 LQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLID 558
+ + D+ E+ ++ + A +R R++ + A V+C T GAG L F+ ++ID
Sbjct: 1480 VSKQVDQMKEVQKNNRRTMDASRRKARRDVLEEAHVVCSTLSGAGHESLNESEFQMIIID 1539
Query: 559 ESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPI 618
E+ QA E LIP VLVGD QL P ++ +A + QSLF RL +
Sbjct: 1540 EAAQAIELSSLIPFKFSCSHCVLVGDEKQLPPTVISMQATKFRYNQSLFVRLQRQSPNAV 1599
Query: 619 R-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW---PVPNRPMFFYVQM 674
L +QYRMHPS+S PS FY+ L++G + + PW P FF V
Sbjct: 1600 NLLSIQYRMHPSISALPSKVFYDSRLKDGPDMEAKTKQ----PWQFDPKFGAYRFFNVFR 1655
Query: 675 GQEEISASGTSYLNRTE----AANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMS 730
G E+ A S N E A ++VT F SG +++G+I Y+GQ IV
Sbjct: 1656 GVED-RAGAKSSKNIAECEVAVALYSRLVTQFGSSGDFAAKVGIIAGYKGQ---IVELRR 1711
Query: 731 R-NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE-HQGIGFLNDPRRLNVALTRA 788
R + + K+I +VD FQG+EKD II SCVR+ IGF++D RR+NVALTRA
Sbjct: 1712 RFENRFGRDITKKIAFNTVDGFQGQEKDVIIFSCVRAGTGTTNIGFMSDTRRMNVALTRA 1771
Query: 789 RYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
+ + ILG+ LS+ W ++ E + + + ++ + Q PK
Sbjct: 1772 KSSLFILGHADTLSRSDETWKQIVADANERKLMTDVDVSYFTAPITQTSVPK 1823
>gi|121711100|ref|XP_001273166.1| DNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|119401316|gb|EAW11740.1| DNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 760
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 235/474 (49%), Gaps = 71/474 (14%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R ++LI GPPGTGKT T ++ M K+ + +VLVC PSN++V
Sbjct: 244 PTLNDSQKEAIRFALASRDVALIHGPPGTGKTHTLIELIIQMVKR-KLRVLVCGPSNISV 302
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + +VR+ +R E ++ E + VR +++ +
Sbjct: 303 DNIVERLALKKVPIVRIGHPARLLPSVLEHSLEVLTHTSEAAAIVKDVRKEIDEKQASIR 362
Query: 498 KLQQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
K + ++ + E ++Y+ + + + + V+ T GAG +L N +F V
Sbjct: 363 KTKSGRERRAIYGDLKELRREYRDRESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVV 422
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC-----KKAARAG--------- 601
+IDE++QA E +C I L L A +VVL GDH QL P + K A G
Sbjct: 423 VIDEASQALEAQCWISL-LSASKVVLAGDHLQLPPTVKSTVQKSKSAKTKGQSNTKSGST 481
Query: 602 ------------LAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNG 646
L ++F+RL+ L G+K + L QYRMH + +FPS+ YE L
Sbjct: 482 DASDADIIGGVSLETTMFDRLLALHGPGIKRM-LTTQYRMHEKIMQFPSDELYESRLIAA 540
Query: 647 VTINERQSSGIDFPWPVP-----NRPMFFYVQMG--------QEEISAS----GTSYLNR 689
++ R D P+ V P+ F+ G +EI G S N
Sbjct: 541 DSVKLRLLK--DLPYEVEETDDTKEPLVFWDTQGGDFPEKTEDDEIGKKEALLGESKSNE 598
Query: 690 TEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVD 749
EA V K V ++SGV P I ITPY GQ A + + LR++ Y +E+ SVD
Sbjct: 599 MEALVVVKHVDNLIQSGVRPEDIACITPYNGQLALL------SSMLREK-YPGLELGSVD 651
Query: 750 SFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
FQGREK+ +++S VRSN +GFL + RRLNVA+TR + + I G+ + +SK
Sbjct: 652 GFQGREKEAVVVSLVRSNPENEVGFLGEKRRLNVAMTRPKRHLCICGDAETISK 705
>gi|71016830|ref|XP_758928.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
gi|46098459|gb|EAK83692.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
Length = 3036
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 176/523 (33%), Positives = 255/523 (48%), Gaps = 113/523 (21%)
Query: 390 ELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHM------------AKQGQG- 435
++N Q A+ S+ SLIQGPPGTGKT T A++ A Q QG
Sbjct: 1471 QVNEPQARAILGSLATEGFSLIQGPPGTGKTKTICALIGAFVSSRKGPTTSIQAGQNQGK 1530
Query: 436 -----QVLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSSPVEHLT 480
++L+CAPSN A+D++A++ A G+ K+VR+ VS V+ +
Sbjct: 1531 LGATKKILLCAPSNAAIDEVAKRARA-GIRLADGKVIHPKIVRMGRDDTMNVS--VKDIA 1587
Query: 481 LHYQV-------------RHLDTSEK-----SELHKLQQLKDEQ---------------- 506
L Y + R+ T+ SE+H L+ ++++
Sbjct: 1588 LEYLIDQRLEGSGAFDNHRNGGTTADPSALHSEIHSLKMQREQKQIELSQARATGTPALV 1647
Query: 507 ---------------GELSSSDEKKYK---------ALKRATEREISQSADVICCTCVGA 542
G +S DE K K A +R EI ADVIC T GA
Sbjct: 1648 TQLEAEIRNLSAKRLGVMSKLDEAKDKQQSQHRQREADRRRARLEILGDADVICTTLSGA 1707
Query: 543 GDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G L+ +F F V+IDE+ QA E +IPL G KQ ++VGD QL P ++ ++A +
Sbjct: 1708 GHEMLSGVSFDFETVVIDEAAQAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQEAEKL 1767
Query: 601 GLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE--RQSSGI 657
G +QSLF R+ + + L +QYRMHP +S FPS +FY+ LQ+G + + RQ
Sbjct: 1768 GYSQSLFVRMFERSPQAVHLLSIQYRMHPEISVFPSKAFYDSKLQDGPNMAQLTRQ---- 1823
Query: 658 DFPWPV--PNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR----SGVVPSQ 711
PW RP F ++ + E S +NR E ANV + LR S +
Sbjct: 1824 --PWHKFELTRP-FKFLSIKAPESPGRMHSIINREE-ANVALALYERLRIDNPSENFDYR 1879
Query: 712 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS-NEHQ 770
IGV+T Y+ Q + + L + + I+ +VD FQG+EKD IILSCVRS E +
Sbjct: 1880 IGVVTMYKAQVFELKRTFQQRYGL--DIVERIDFNTVDGFQGQEKDIIILSCVRSAAEPR 1937
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLT 812
IGFL+D RRLNVA+TRA+ + I+GN + L + P+W+ L+T
Sbjct: 1938 SIGFLSDQRRLNVAVTRAKSNLFIIGNAEHLRRGDPIWDRLVT 1980
>gi|189198704|ref|XP_001935689.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187982788|gb|EDU48276.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1954
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 255/541 (47%), Gaps = 98/541 (18%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV------------YHMAKQGQGQ 436
+L +Q A+KS + +LIQGPPGTGKT T AIV ++A G+ Q
Sbjct: 1272 DLTLAQGKAIKSAIDNDGFTLIQGPPGTGKTRTITAIVGAILSGSFRNRGTNIAVPGKSQ 1331
Query: 437 -------VLVCAPSNVAVDQLAEKI---------SATGLKVVRLCAKSREAVSSPVEHLT 480
+LVCAPSN AVD+L ++ + +VRL +AV + ++ LT
Sbjct: 1332 SDPTPKKILVCAPSNAAVDELCMRLRPGIKTLDGEVRQINIVRLGRS--DAVEANLQDLT 1389
Query: 481 LHYQV---------------------RHLDTSEK-SELHKLQQLKDEQGELSSSDEKKYK 518
L V H +TS++ E ++L+ + +G+ ++ +
Sbjct: 1390 LDELVDKRLGADSNSNEQEARQKVFDEHQETSKQLREAYELRNKGEVKGDAAARLDNDIS 1449
Query: 519 AL----------------------KRATERE------ISQSADVICCTCVGAGDP--RLA 548
AL +RA R I A V+C T G+G R
Sbjct: 1450 ALYHKKKLLSGQIDAIKDSQASTGRRADSRRDKAIAAILNDAHVVCSTLNGSGHHMFRTI 1509
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
F V++DE+ Q E LIPL G + +LVGD QL P I K+A R AQSLF
Sbjct: 1510 EVEFDTVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTIFSKEAVRFRYAQSLFM 1569
Query: 609 RLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR- 666
R+ + L VQYRMHP +S+FPS +FY+G L +G + + PW +
Sbjct: 1570 RMQQNHPNDVHLLDVQYRMHPEISQFPSQTFYDGKLLDGGDMASVRKQ----PWHQSSLL 1625
Query: 667 -PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVITPYEGQR 722
P F+ GQ++ + SG S +N E A + +T+ + +IG+ITPY+ Q
Sbjct: 1626 GPYRFFDVKGQQQKATSGKSLMNIAEINVALQLYHRLTSDFPNYNFKGKIGIITPYKSQL 1685
Query: 723 AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
I R Q + ++I+ + D+FQGRE + II SCVR+N GIGFL+D RR+N
Sbjct: 1686 YEIKERFKRTYG--QTIVEDIDFNTTDAFQGRENEIIIFSCVRAN--GGIGFLDDVRRMN 1741
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN-LKQSMVQFQKPKKI 841
V LTRA+ + +LG+ L W L+ + +E + +G ++ L+Q F PK+
Sbjct: 1742 VGLTRAKSSLWVLGDSTSLQSGEYWRKLILNAQERKRFTDGQVSRMLEQHSSNFPAPKEG 1801
Query: 842 Y 842
Y
Sbjct: 1802 Y 1802
>gi|83772589|dbj|BAE62717.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1850
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 252/537 (46%), Gaps = 108/537 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM-----AKQG----------- 433
+N +Q A+KS L +LIQGPPG+GKT T A+V + QG
Sbjct: 1166 VNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTGVGN 1225
Query: 434 ---------QGQVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSP 475
++LVCAPSN AVD+L + A L V+RL +A+++
Sbjct: 1226 IKPPPRTTTSKKLLVCAPSNAAVDELVMRFKAGVKTIQGRHEKLSVIRLGRS--DAINTN 1283
Query: 476 VEHLTL------------------------HYQVRHLDTSEKSELHKLQQLKDEQGELSS 511
V +TL + + + DT+ K KL Q + + + +
Sbjct: 1284 VLDVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSKLDQCRAQGLPVPA 1343
Query: 512 SDEKKYKALK----------------------------RATEREISQSADVICCTCVGAG 543
E++++ LK R ++EI A VIC T G+G
Sbjct: 1344 ELEREFELLKKKKTALSQEIDNARDKNHSAARDADLNRRKIQQEIIDGAHVICATLSGSG 1403
Query: 544 DPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1404 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1463
Query: 602 LAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
QSLF R+ + + L +QYRMHP +S +P N+FY+G LQ+G + ++ P
Sbjct: 1464 YEQSLFVRMQSNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRAR----P 1519
Query: 661 WPVPN--RPMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGV 714
W P F+ G + +A G S +N R E++V+ F + +IG+
Sbjct: 1520 WHQSELLSPYRFFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDF-QGFDFSGKIGI 1578
Query: 715 ITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+GQ R ++ ++ G ++ I+ + D+FQGRE + II SCVR++ ++GIG
Sbjct: 1579 ITPYKGQLRELKTHFAAKYG---NAIFNMIDFNTTDAFQGRESEVIIFSCVRAS-NKGIG 1634
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
FL+D RR+NV LTRA+ + +LGN + L + WN L+ + +G + + Q
Sbjct: 1635 FLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRRSVYTDGDVLKILQ 1691
>gi|308198102|ref|XP_001386840.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149388861|gb|EAZ62817.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 1999
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 176/573 (30%), Positives = 270/573 (47%), Gaps = 99/573 (17%)
Query: 390 ELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIV-YHMAKQ-----------GQG- 435
++N SQ A+ S SLIQGPPGTGKT T IV Y +++Q G G
Sbjct: 1281 DVNKSQAKAIIGSYNSEGFSLIQGPPGTGKTKTILGIVGYSLSQQVDEKIIIKIDQGNGN 1340
Query: 436 ---------QVLVCAPSNVAVDQLAEKI-----SATGLKVV-RLCAKSR-EAVSSPVEHL 479
+VL+CAPSN AVD+L ++ ++ G ++ +L R +A+++ V+ L
Sbjct: 1341 VISGNEKKPKVLICAPSNAAVDELVVRLRDGVRNSRGEHIIPKLVRMGRSDAINAAVKDL 1400
Query: 480 TLH---------------------------------------YQVRHLDTSEKSELH--- 497
TL Q L + E EL
Sbjct: 1401 TLEELVEKELQAKAMNTDTSTDPNIRAEHSKCIEERDNLRRKLQTDSLSSKEIDELESAL 1460
Query: 498 --------KLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLAN 549
+L + D Q E S + + +R + +I A +IC T G+ LAN
Sbjct: 1461 REINKKRTELGKQLDLQRERVSIAYRTREIERRNAQAKILNDAQIICSTLSGSAHDFLAN 1520
Query: 550 F--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
F QV+IDE+ Q E +IPL G K+ ++VGD QL P ++ + AA QSLF
Sbjct: 1521 MGITFDQVVIDEACQCVELSSIIPLRYGCKKCIMVGDPNQLPPTVLSQAAASFNYEQSLF 1580
Query: 608 ERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVP 664
R+ + L VQYRMHP +S FPS FY+ L++G E ++ + PW P
Sbjct: 1581 VRMQQNNPNSVYLLDVQYRMHPQISAFPSAQFYQSRLKDG----EGMAAKNERPWHSQYP 1636
Query: 665 NRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEG 720
P F+ + + + + S N EA VEK++T L +IG+I+PY+
Sbjct: 1637 LSPYRFFDIVSRHQRNELSRSLFNTGEARVALELVEKLMT-LLPEDQFSGRIGIISPYKE 1695
Query: 721 QRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
Q + + ++ + G + +I+ +VD FQG+EK+ II+SCVR++++ +GFL+D R
Sbjct: 1696 QIKTLRDVFIKKYG---YSITTQIDFNTVDGFQGQEKEIIIMSCVRASDNGNVGFLSDVR 1752
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
R+NVALTRAR + ILGN + L + +WN LLT + C+ + L + Q +
Sbjct: 1753 RMNVALTRARTTLWILGNKESLMRNKIWNKLLTDATDRNCVSQAYPGFLSSASEQAPGKR 1812
Query: 840 KIYNDRRLFFGAGPGIVPNDISTSNPNADRRGS 872
K+ +R+ + N+ T P D+R S
Sbjct: 1813 KVVENRQGNATKRSKHIKNE-GTVKPAQDKRNS 1844
>gi|388851768|emb|CCF54574.1| related to SEN1 protein [Ustilago hordei]
Length = 900
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 176/526 (33%), Positives = 254/526 (48%), Gaps = 106/526 (20%)
Query: 390 ELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHM------------AKQGQGQ 436
++N Q A+ S+ SLIQGPPGTGKT T A++ A Q QG+
Sbjct: 251 QVNEPQARAILGSLATEGFSLIQGPPGTGKTKTICALIGAFVSRQKGPSTSVQAGQAQGK 310
Query: 437 V------LVCAPSNVAVDQLAEKISATGL---------KVVRLCAKSREAVSSPVEHLTL 481
V L+CAPSN A+D++A++ A+ KVVR+ + EAV+ V+ ++L
Sbjct: 311 VDATKKILLCAPSNAAIDEVAKRARASIRLLDGKVIHPKVVRVGRE--EAVNVSVKDISL 368
Query: 482 HY-----------------------------QVRHLDTSEKSELHKLQQ----------- 501
Y ++ HL K + +KL Q
Sbjct: 369 EYLVEQRLKADGVFDGNRNIVTAADLSALHAEIHHLKMQRKQKQNKLSQARRSGDKALAT 428
Query: 502 -LKDEQGELSSS-----DEKKYK---------ALKRATEREISQSADVICCTCVGAGDPR 546
LK E LS++ DE K K AL+R EI ADVIC T GAG
Sbjct: 429 QLKAEIRNLSANVKSKFDEAKGKQKSQHRQLEALRRRARLEILGEADVICTTLSGAGHKM 488
Query: 547 LAN--FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
L+ F F V+IDE+ QA E +IPL G KQ ++VGD QL P ++ ++A + G +Q
Sbjct: 489 LSRVAFDFETVVIDEAAQAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQQADKLGYSQ 548
Query: 605 SLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP- 662
SLF R+ + + L +QYRMHP +S FP+ +FY LQ+G + E PW
Sbjct: 549 SLFARMFERAPQEVHLLSIQYRMHPEISLFPAKAFYGSKLQDGPDMAESTHQ----PWHR 604
Query: 663 -VPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS----QIGVITP 717
RP F ++ E S +N+ E ANV + LR+ +IG++T
Sbjct: 605 YELTRP-FKFLSTKAPESPGPFHSIINKEE-ANVALALYGRLRTDHAQENFDYRIGIVTM 662
Query: 718 YEGQRAYIV-NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS-NEHQGIGFL 775
Y+ Q + + R G + + + I+ +VD FQG+EKD IILSCVRS + IGFL
Sbjct: 663 YKAQVFELKQTFQQRYG---KDIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFL 719
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECL 820
D RRLNVA+TRA+ + I+GN + L + +W L+ ++ E +
Sbjct: 720 RDGRRLNVAVTRAKSNLFIIGNAEHLRRGDAIWESLVAAAEQREAV 765
>gi|403341854|gb|EJY70244.1| DNA-binding protein SMUBP-2 [Oxytricha trifallax]
Length = 1044
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 257/539 (47%), Gaps = 97/539 (17%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A++ L +S+I GPPGTGKT T ++ ++ + +++ CAPSN+AVD
Sbjct: 188 LNESQQTAIEKCLTSTDVSMIHGPPGTGKTTTVVELILQSVEKQKAKIMACAPSNIAVDN 247
Query: 450 LAEKISATG--LKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKS-ELHKL-QQLKD 504
+ E++ A+ L +VR+ +R + V+ L + + D +++ E+ ++ +L
Sbjct: 248 IIERLYASNPKLNIVRIGHPAR--LMESVQQFCLDALISKRTDYGKQTNEIRRMINKLNQ 305
Query: 505 EQGELSSSDEKK-----YKALKRATER-------EISQSADVICCTCVGAGDPRLANF-- 550
+ S E+K YK LK+ ++ +I ADVICCT AGD L F
Sbjct: 306 KLQRTKSKTERKDIYGEYKMLKKDLKQIEQNHINDIFMRADVICCTLTSAGDKTLTRFIN 365
Query: 551 ------RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
F ++IDE Q+ EP C IP+ AK++V+ GDH QL + +A+R GL+
Sbjct: 366 NNMQDSLFDMLVIDECAQSIEPACWIPIKF-AKKLVMAGDHKQLDATVKSDEASRKGLSL 424
Query: 605 SLFERLVLLGLK-PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV 663
SLFER++ K L QYRM+ + ++ + + Y+G L+ V
Sbjct: 425 SLFERVMKFKNKISTMLDEQYRMNEKIMKWSNQAMYDGNLK--------------AHEDV 470
Query: 664 PNRPMFFYVQMGQEEISAS---------------------GTSYLNRTEAANVEKIVTTF 702
NR M QEE+ S S N E V +++
Sbjct: 471 KNRLMVDLYAQSQEELMLSPLLLIDTAGALMYEGIDEQSENESKYNNGECDLVIQLLKEL 530
Query: 703 LRSGVVPSQIGVITPYEGQRAYIVNYMSRN-------------GALRQQLYKEIEVASVD 749
+ G+ S IGVITPY Q VN + + G + Q+ + IEV++VD
Sbjct: 531 VTMGIRKSDIGVITPYNAQ----VNQIKKAIRGAEELHTHVEIGQIPQRGGERIEVSTVD 586
Query: 750 SFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNG 809
FQGREK+ II+S VRSN IGFL++ RR+NVA+TRA+ I+ + +S+
Sbjct: 587 GFQGREKEVIIISMVRSNPKGEIGFLSNERRMNVAVTRAKRLCAIIADSGTVSRNNFLKD 646
Query: 810 LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFG--AGPGIVPNDISTSNPN 866
L+ ++KE N +++S +Q D R+ +G GI ++I N +
Sbjct: 647 LIQYFKE---------NAIQRSAFDYQGN----TDVRIMYGQSQAAGIEKHEILKRNED 692
>gi|281421454|ref|ZP_06252453.1| DNA helicase [Prevotella copri DSM 18205]
gi|281404526|gb|EFB35206.1| DNA helicase [Prevotella copri DSM 18205]
Length = 688
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 244/487 (50%), Gaps = 73/487 (14%)
Query: 383 FGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F P LN +Q AV VL + ++++ GPPGTGKT T + + + QVLVCA
Sbjct: 211 FEPMKFPWLNPTQERAVNEVLWAKDVAIVHGPPGTGKTTTLVEAINETLMR-ETQVLVCA 269
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++EK+ G+ V+R+ +R V+ + L Y+ R H D + + K
Sbjct: 270 QSNMAVDWISEKLVDRGINVLRIGNPTR--VNDKM--LGFTYERRFESHADYPQLWAIRK 325
Query: 499 -LQQLKDEQGELSSSDEKKYKALK-RATEREISQSAD------VICCTCVGAGDPRLANF 550
+++L+ + + S + +K LK RA E E+ +A+ VI CT VG+ L
Sbjct: 326 AIRELRKNRKKGSENYHQKMDRLKSRAAEIELRINAELFGEARVIACTLVGSAHHLLEGM 385
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
+F + IDE+ QA E C IP+ A +V+L GDHCQL P + A RAGL ++L ER+
Sbjct: 386 KFGTLFIDEAAQALEAACWIPM-RRASRVILAGDHCQLPPTVKSIAALRAGLGKTLMERI 444
Query: 611 VLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
KP L++QYRM+ + F S+ FY G +++ I R S +D+ P+
Sbjct: 445 A--ENKPEVVTLLKIQYRMNDEIMRFSSDWFYGGKVESAPQIKYR--SVLDYDHPIT--- 497
Query: 668 MFFYVQMGQEE---------------------ISASGTSYLN-----------RTEAANV 695
++ EE +A+ S LN R A
Sbjct: 498 ---WIDTSNEENQITIEGEDAPEDSVSTSSSVSAANQNSDLNFKEQFVGESFGRINKAEA 554
Query: 696 EKIVTT----FLRSG---VVPSQI--GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
E + T F + G V+ +I G+I+PY Q Y+ + + + + I V
Sbjct: 555 ELTLLTLAEYFTKIGKQRVLEERIDVGIISPYRAQVQYLKKLIKKYEFFK-PYRRLISVN 613
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD FQG+E+D I++S VRSN+ IGFL D RR+NVA+TRAR ++ILGN ++K P
Sbjct: 614 TVDGFQGQERDVILISLVRSNDEGQIGFLKDLRRMNVAMTRARMKLIILGNKDTMTKHPF 673
Query: 807 WNGLLTH 813
+ L +
Sbjct: 674 YKKLWEY 680
>gi|391873505|gb|EIT82535.1| tRNA-splicing endonuclease positive effector [Aspergillus oryzae
3.042]
Length = 2123
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 252/537 (46%), Gaps = 108/537 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM-----AKQG----------- 433
+N +Q A+KS L +LIQGPPG+GKT T A+V + QG
Sbjct: 1289 VNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTGVGN 1348
Query: 434 ---------QGQVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSP 475
++LVCAPSN AVD+L + A L V+RL +A+++
Sbjct: 1349 IKPPPRTTTSKKLLVCAPSNAAVDELVMRFKAGVKTIQGRHEKLSVIRLGRS--DAINTN 1406
Query: 476 VEHLTL------------------------HYQVRHLDTSEKSELHKLQQLKDEQGELSS 511
V +TL + + + DT+ K KL Q + + + +
Sbjct: 1407 VLDVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSKLDQCRAQGLPVPA 1466
Query: 512 SDEKKYKALK----------------------------RATEREISQSADVICCTCVGAG 543
E++++ LK R ++EI A VIC T G+G
Sbjct: 1467 ELEREFELLKKKKTALSQEIDNARDKNHSAARDADLNRRKIQQEIIDGAHVICATLSGSG 1526
Query: 544 DPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1527 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1586
Query: 602 LAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
QSLF R+ + + L +QYRMHP +S +P N+FY+G LQ+G + ++ P
Sbjct: 1587 YEQSLFVRMQSNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRAR----P 1642
Query: 661 WPVPN--RPMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGV 714
W P F+ G + +A G S +N R E++V+ F + +IG+
Sbjct: 1643 WHQSELLSPYRFFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDF-QGFDFSGKIGI 1701
Query: 715 ITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+GQ R ++ ++ G ++ I+ + D+FQGRE + II SCVR++ ++GIG
Sbjct: 1702 ITPYKGQLRELKTHFAAKYG---NAIFNMIDFNTTDAFQGRESEVIIFSCVRAS-NKGIG 1757
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
FL+D RR+NV LTRA+ + +LGN + L + WN L+ + +G + + Q
Sbjct: 1758 FLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRRSVYTDGDVLKILQ 1814
>gi|390596463|gb|EIN05865.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1024
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 247/517 (47%), Gaps = 84/517 (16%)
Query: 364 HLLGHEVEVQMVRNTLPRRF---------GAPGLPELNASQVFAVKSVLQRPISLIQGPP 414
L G VE Q+++ + RR+ G P LP LN SQ AV ++ +SL+QGPP
Sbjct: 446 QLRGAFVEDQLIQ-SWARRYMRPNPVRIEGDPVLP-LNESQTRAVAMMVGERVSLVQGPP 503
Query: 415 GTGKTVTSAAIVYHMAKQGQ--GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR--- 469
GTGKT T V + + +LVC +NVAVD L E + A L +R+ +
Sbjct: 504 GTGKTKTIIEAVKLLKRHFAVPHPILVCTFTNVAVDNLVEGL-APSLSPLRVGYGGKVKP 562
Query: 470 ----EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS----------DEK 515
+ + +E L+ +V L+ E++ ++ L+ + + D K
Sbjct: 563 SLYPHTLDAKLEQHELYSEVLKLERQEEALEKRVVSLRMSSTKAAEKLSIMPLDAEHDRK 622
Query: 516 KYKALKRAT--EREISQ-------------------------SADVICCTCVGAGDPRLA 548
+ A KR ++E++Q +ADV+C TC+ + L
Sbjct: 623 RANATKRRDRLDQEVTQCGTSLGNIRKRIYAFKQQMLSDVVHAADVVCTTCITSACTALN 682
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
F V +DE++ +TEP LIPL+ G++ + L+GDH QL PVI ++A GL SLFE
Sbjct: 683 VIDFPVVFLDEASMSTEPASLIPLMKGSQHMTLIGDHKQLPPVITSREAIAGGLGISLFE 742
Query: 609 RLVLLGLKP-IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVT---------INERQSSGID 658
RL G+ P I L +QYRMHP +S+FPS FY L++G+ + S+ +
Sbjct: 743 RLTEEGVVPSIMLDLQYRMHPQISKFPSAEFYNFALRDGMLDSSGGVPAQLRPPTSAHLQ 802
Query: 659 FPWPVPNRP-MFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL--RSGVVPSQIGVI 715
+RP + F G E S S +N T+A V ++ L + IGVI
Sbjct: 803 MNPQTGDRPSVIFLDHQGLE--SPKDRSKVNYTDADIVCSVIEDLLIQNPDLRGEDIGVI 860
Query: 716 TPYEGQRAYIVNYMSRN-----------GALRQQLYKEIEVASVDSFQGREKDYIILSCV 764
PY Q + ++ + G R +I++ +VD F+GREKD II S V
Sbjct: 861 APYVAQIRLLTRLLTTDAKSQARFQAALGDQRAMQLPQIDIKTVDGFEGREKDVIIFSTV 920
Query: 765 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
RSN +GFL D RRLNV LTRA+ G+ ++GN L
Sbjct: 921 RSNSSGHVGFLADRRRLNVGLTRAKRGLFVVGNLNTL 957
>gi|67472499|ref|XP_652053.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56468857|gb|EAL46665.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 931
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 177/312 (56%), Gaps = 12/312 (3%)
Query: 527 EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
+I + +C T P L +F ++DE+ Q+ EPE L ++ ++ VL+GD
Sbjct: 540 DILSGIECVCSTLSLCTRPTLLKQKFFASIVDEAAQSLEPETLAGII-NVRKTVLIGDIQ 598
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVL-LGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQN 645
QL P + +A AG +S+FER + +K L+ QYRMHP++SEF + FY L+N
Sbjct: 599 QLQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLEN 658
Query: 646 GVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS 705
GV+ +R I +P P+ F G E +SGTSY N E ++++V L +
Sbjct: 659 GVSSKDRFDDRIINFFPDYTNPIMFINCDGTEHYGSSGTSYNNAGEVQIIQEVVEKLLNN 718
Query: 706 GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 765
+ ++IG+I+PY+ Q+ I Y+S +I+VA++D FQG EK+YII SCVR
Sbjct: 719 DIEENEIGIISPYQAQQELISQYVS----------TKIKVANIDGFQGNEKEYIIFSCVR 768
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPL 825
SN+ G+GF+ND +RLNVAL RA+ G++I+GN + L +WN L+ + + L E
Sbjct: 769 SNQTLGVGFVNDYKRLNVALKRAKSGLIIIGNIQTLITSKVWNMLIHQFYLRDALFELKE 828
Query: 826 NNLKQSMVQFQK 837
++ Q V+ Q+
Sbjct: 829 HDFVQYNVENQE 840
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 382 RFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV---------YHMAKQ 432
++ P L LN Q A+ + L ISL+ GPPGTGKT + +I ++ +
Sbjct: 303 KYNIPNLSNLNDYQRKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKRRFYNINR 362
Query: 433 GQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
G+ ++LVCA SN AVD + K+ G+ VR+ A
Sbjct: 363 GEKKLLVCASSNNAVDVICSKLIEKGVPTVRVVA 396
>gi|302816629|ref|XP_002989993.1| hypothetical protein SELMODRAFT_130836 [Selaginella moellendorffii]
gi|300142304|gb|EFJ09006.1| hypothetical protein SELMODRAFT_130836 [Selaginella moellendorffii]
Length = 826
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 193/618 (31%), Positives = 292/618 (47%), Gaps = 64/618 (10%)
Query: 257 GLNKKRVAYFVFPKEDNEL---RLVPGDELRLRYSGDAAHPAWQSV-GHVIKLTAQE--- 309
GL V F N L L PGD + +R S PA + + G V KL
Sbjct: 206 GLGGTEVVSFRSKNSQNRLPPTSLSPGDMVCVRVSNRQGIPATECLRGSVYKLCEDGQFI 265
Query: 310 EVAL-----ELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTF---AVDETSVSGYI 361
EVAL L G + I+ F + +T+++R A+K AV + + + I
Sbjct: 266 EVALPGGGRALMKLSGRSIRIDKIFDL---ANATTYERNCEALKQLKKVAVSKDNPAAAI 322
Query: 362 YHHLLGHEVEVQ-------MVRNTLPRRFGAPGLPELNASQVFAVKSVLQ--RPISLIQG 412
L G E++ + +T + SQ A++ L RP+++IQG
Sbjct: 323 VAVLFGQGEEIEKLARGKDQLEDTHSLLASTLSGASFDESQRRAIQLGLDKSRPVAVIQG 382
Query: 413 PPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR--- 469
PPGTGKT I+ +G +VL AP+N AVD L +++S T L+VVR+ R
Sbjct: 383 PPGTGKTNVVTEIIIQAVARGD-KVLATAPTNAAVDNLVDRLSDTSLRVVRVGNPVRMSP 441
Query: 470 EAVSSPVEHLTLHYQV--RHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALK---RAT 524
VS + H+ V + S+K+ L + ++ + G++ + +K + L R
Sbjct: 442 SVVSKSLTHIVSSELVDFKRSIASDKAALRR-TSMRSQDGKIKAEVDKNLRRLDKSMRKK 500
Query: 525 EREI----SQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQATEPECLIPLVLGAKQV 579
E EI +A V+ CT +GAGDP L F ++DE+ QA EP C I +L + +V
Sbjct: 501 EEEIPAAVLAAAQVVLCTSIGAGDPSLRKTGLFDLAVVDEAGQAMEPSCWIG-ILRSSRV 559
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERL-VLLGLKPIR---LQVQYRMHPSLSEFPS 635
VL GD CQL P + +A GLA SL ER LG + LQVQYRM+ +++ + S
Sbjct: 560 VLAGDACQLAPTVFSAEAVDGGLATSLMERASTSLGHSAVMTTMLQVQYRMNEAIASWAS 619
Query: 636 NSFYEGTLQNGVTINER---QSSGIDFPWP-------VPNRPMFFYVQMGQEE-ISASGT 684
+ Y G ++ + ++ S + W + R F + MG EE + GT
Sbjct: 620 SEMYGGLVKTAPLVAKQVLSDSPQVKETWRTRAAMLLLDTRKAFGSLAMGCEECMDYLGT 679
Query: 685 -SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S+ N EA V + V + SGV S I V +PY Q ++ R + L +
Sbjct: 680 GSFYNDGEADIVVEHVKALIHSGVPASSIAVQSPYLAQ-----VHLLRARLDEESLGNIV 734
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+ S+DSFQGRE D +++S VRSNE +GFL D RR+NVA+TR+R + I+ + +
Sbjct: 735 QTESIDSFQGREADAVVISMVRSNELGVVGFLADKRRINVAVTRSRKHVAIVCDSSTVGS 794
Query: 804 QPLWNGLLTHYKEHECLV 821
LL H + + +V
Sbjct: 795 NSFLRRLLQHIRAYGIVV 812
>gi|302499595|ref|XP_003011793.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
gi|291175346|gb|EFE31153.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
Length = 2117
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 194/650 (29%), Positives = 285/650 (43%), Gaps = 134/650 (20%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM----------------AKQ 432
+LN +Q A+KS + +LIQGPPG+GKT T AIV + +
Sbjct: 1303 DLNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALLTPILAERKVPQPKIASDS 1362
Query: 433 GQG-------QVLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAVSSP 475
Q ++LVCAPSN AVD+L + G+K V+RL +A+++
Sbjct: 1363 AQASKSTPSKKLLVCAPSNAAVDELVMRFKE-GVKTLNGKTQPISVIRL--GRSDAINAN 1419
Query: 476 VEHLTL----HYQVRHLDTSEKSELHKLQQLKDEQGE---------------------LS 510
V +TL + ++ D + E LQ +E E +S
Sbjct: 1420 VLDVTLDELVNAKLNQSDQKKNGEERDLQSYFNEHKETSAKFIEIRQRIDQCRARAEPVS 1479
Query: 511 SSDEKKYKALKRA------------------------TEREISQS----ADVICCTCVGA 542
+ E+++ LKR T R I Q A VIC T G+
Sbjct: 1480 NELEREFDLLKRKKAQLSQAIDNARDKNHAAARNAELTRRRIQQEIIDGAHVICSTLSGS 1539
Query: 543 GDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G + F V+IDE+ Q+ E LIPL G + VLVGD QL P ++ K+A+R
Sbjct: 1540 GHEMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRF 1599
Query: 601 GLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQSSG 656
QSLF R+ + L QYRMHP +S+FPS +FY+G LQ+G + ++ G
Sbjct: 1600 QYEQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHG 1659
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL---RSGVVPSQIG 713
+ P FF VQ G +A G S +N E ++ L R+ +IG
Sbjct: 1660 SELLGPY----RFFDVQ-GMHSSAAKGHSLVNIAELTVAMRLYERLLADYRNYDFAGKIG 1714
Query: 714 VITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGI 772
+ITPY+GQ R + ++ G+ ++ +E + D+FQGRE + II SCVR+++ +GI
Sbjct: 1715 IITPYKGQLRELKSRFAAKYGS---SIFTAVEFNTTDAFQGRECEVIIFSCVRASD-RGI 1770
Query: 773 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSM 832
GFL+D RR+NV LTRA+ + +LGN + L + W L+ +E + EG + + Q
Sbjct: 1771 GFLSDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIYDARERQLYTEGDILRILQK- 1829
Query: 833 VQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLH 892
Q ++ N + A G +P S R GS G PP+ P
Sbjct: 1830 PQISLDMELNNVEMVDAPAEVGNIPTPSS-------RPGSSMAGSSNSRPPSRLSNP--- 1879
Query: 893 PAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFG 942
Q S P +PS AV PV + P G G
Sbjct: 1880 --------------QSTAESLPSELPSGSAVGTPVPCLPDGPSGGKSGLN 1915
>gi|255566048|ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis]
gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2, putative [Ricinus communis]
Length = 989
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 226/445 (50%), Gaps = 46/445 (10%)
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 463
+RP+ +IQGPPGTGK+ ++ QG+ +VLV AP+N AVD + EK+S GL +VR
Sbjct: 530 KRPLLIIQGPPGTGKSGLLKELIVRAVHQGE-RVLVTAPTNAAVDNMVEKLSNIGLDIVR 588
Query: 464 LCAKSREAVSSPVEHLTLHYQV-------RHLDTSEKSELHKLQQLKDEQGELSSSDEKK 516
+ +R +SS V +L V R +KS+L K + E L++ +
Sbjct: 589 VGNPAR--ISSAVASKSLSEIVNSKLATFRMEFERKKSDLRKDLRHCLEDDSLAAGIRQL 646
Query: 517 YKALKRATEREIS-------QSADVICCTCVGAGDPRLANF-RFRQVLIDESTQATEPEC 568
K L + +++ SA V+ T GA DP + F V+IDE+ QA EP C
Sbjct: 647 LKQLGKTMKKKEKESVKEVLSSAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPSC 706
Query: 569 LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRM 626
IP++ G K+ +L GD CQL PVI+ +KA GL SL ER L G+ ++L QYRM
Sbjct: 707 WIPILQG-KRCILAGDQCQLAPVILSRKALEGGLGVSLLERAATLHDGVLALQLTTQYRM 765
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINER---QSSGIDFPWPVPNRPMFFYVQM--------G 675
+ +++ + S Y G L++ + S + W + +M
Sbjct: 766 NDAIASWASKEMYGGLLKSSSKVASHLLVHSPFVKPTWITQCPLLLLDTRMPYGSLFIGC 825
Query: 676 QEEISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSR--- 731
+E + +GT S+ N EA V + V + + +GV P+ I V +PY Q + + +
Sbjct: 826 EEHLDPAGTGSFYNEGEAEIVVQHVISLIYAGVRPTTIAVQSPYVAQVQLLRDRLDELPE 885
Query: 732 -NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARY 790
+G +EVA++DSFQGRE D +I+S VRSN +GFL D RR+NVA+TRAR
Sbjct: 886 ADG---------VEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARR 936
Query: 791 GIVILGNPKVLSKQPLWNGLLTHYK 815
+ ++ + + LL H +
Sbjct: 937 HVAVVCDSSTICHNTFLARLLRHIR 961
>gi|114145750|ref|NP_001041463.1| zinc finger protein 2 [Ciona intestinalis]
gi|93003124|tpd|FAA00145.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 1048
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 242/492 (49%), Gaps = 57/492 (11%)
Query: 368 HEVEVQMVRNTLPRRFGAPGLP----ELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTS 422
H +EV + +T P++F L LN Q AVK L Q +++I GPPGTGKT T
Sbjct: 161 HLIEV-LFGDTKPQQFNLQELTFVNQNLNECQHNAVKFALSQSELAIIHGPPGTGKTTTV 219
Query: 423 AAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATG--------LKVVRLCAKSREAVSS 474
++ + K G+ +VL CAPSNVAVD L EK+S+ + +VRL +R +
Sbjct: 220 VEVIAQLVKAGR-KVLACAPSNVAVDNLVEKLSSISVDKVSGGKMSIVRLGHPAR-MLEK 277
Query: 475 PVEHLTLHYQVRHLDTSE-----KSELHKLQQ----LKDEQGELSSSDEKK--YKALKRA 523
V+ L+L V D + +S++ +Q+ D+ S E+K + LK+
Sbjct: 278 EVKQLSLDALVSSSDAAAIVRDVRSDIEAVQKSLSRCPDKGKRFSLRQERKLLFSELKQR 337
Query: 524 TER---EISQSADVICCTCVGAGDP----RLANFRFRQVLIDESTQATEPECLIPLVLGA 576
+ EI SADVI T VGA L + F V+IDE Q+ E C I L L A
Sbjct: 338 ENKALNEILSSADVILATNVGAHAKGPLQHLPHDYFDDVIIDECGQSLEAACWISL-LRA 396
Query: 577 KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPI--RLQVQYRMHPSLSEFP 634
++ +L GDH QL P I+ KAA GLA +L ER++ L + L QYRMH + +
Sbjct: 397 RRCILAGDHLQLPPTIISHKAAANGLATTLLERMINLQGDSVVSMLTEQYRMHRDIMHWA 456
Query: 635 SNSFYEGTLQNGVTINERQSS---GIDFPWPVPNRPMFFYVQMGQE---EISASGTSYLN 688
S Y+G L + S G+D P+ G E S S N
Sbjct: 457 SKKMYDGKLTANCKVQCHLLSDMPGVDNTEDT-RLPLLLVDTAGCEMYESESEESISKAN 515
Query: 689 RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE---IEV 745
EA V V T +++GV S I +I+PY Q LRQ L ++ IE+
Sbjct: 516 TGEAMIVCSHVQTLVKAGVKESDIAIISPYNLQVDL----------LRQSLKEKHPNIEI 565
Query: 746 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 805
SVD FQGREK+ +IL+ VRSN + IGFL+D RRLNVA+TRAR + ++ + +
Sbjct: 566 KSVDGFQGREKEAVILTLVRSNLDREIGFLSDKRRLNVAVTRARRHLAVVCDSTTVCSDN 625
Query: 806 LWNGLLTHYKEH 817
L+ H EH
Sbjct: 626 FIKSLIDHITEH 637
>gi|421612070|ref|ZP_16053189.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH28]
gi|408497130|gb|EKK01670.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH28]
Length = 734
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 235/458 (51%), Gaps = 48/458 (10%)
Query: 390 ELNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
ELN Q AV +++ +++I GPPGTGKT T A I+ ++G+ +VL CA SN AVD
Sbjct: 281 ELNPPQRDAVAFAMMADDVAIIHGPPGTGKTTTIAEIIAQSVERGE-RVLACAASNTAVD 339
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE--KSELHKLQQL---- 502
L E++ VVR+ +R V ++ TL V TS K +L Q+
Sbjct: 340 NLLERLVRLMPNVVRVGHPAR--VFESLQEHTLDALVESDPTSTVIKDLRRELDQILREA 397
Query: 503 -----------KDEQGELSSSDEKKYKALKRATEREISQS----ADVICCTCVGAGDPRL 547
+ ++ EL + + + + + R+ ER I +S ADVIC T + L
Sbjct: 398 NRPIRAGGGRERKQRSELFN-EAGRLRGMIRSQERGIVRSVIDRADVICTTTT-IDEELL 455
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
++ F V++DES Q TEP + +L A +++L GDHCQL P ++ AA+ G+ SL
Sbjct: 456 SDQSFDLVVVDESCQCTEP-GMWQAILRADRLILAGDHCQLPPTVLSDDAAKIGMRDSLM 514
Query: 608 ERLVLLGLKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
+RLV + I RL VQYRM+ S+ F S+ FY+ TL ++ + D P N
Sbjct: 515 QRLVHRYGERIYRRLTVQYRMNESIMRFSSDHFYDSTLIADASVKRHRLC--DLPNVEEN 572
Query: 666 ----RPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
P+ G +EE+ G S LN EA + ++V GV QI VI PY
Sbjct: 573 DFTTEPLLLIDTAGAGYEEELEPDGQSKLNYGEAKVILQLVKQLADMGVTGDQIAVIAPY 632
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q RN +R L IE+ +VD FQGREK+ ++++ RSN IGFL+D
Sbjct: 633 AAQ--------VRNLRMRLDL-DGIEIDTVDGFQGREKEVVLITMTRSNPDGEIGFLSDQ 683
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
RR NVALTRA+ ++++G+ L ++ L ++++
Sbjct: 684 RRSNVALTRAKRKLIVVGDSATLCSHDFYSDLFGYFED 721
>gi|156395603|ref|XP_001637200.1| predicted protein [Nematostella vectensis]
gi|156224310|gb|EDO45137.1| predicted protein [Nematostella vectensis]
Length = 2837
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 165/501 (32%), Positives = 253/501 (50%), Gaps = 55/501 (10%)
Query: 371 EVQMVRNTLPRRF--GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYH 428
EV + R L R+ +P L+ Q AV++ L P++++ G PGTGK+ T+ AI H
Sbjct: 2340 EVVLGRKILARQCETNMRVVPGLDDDQAHAVRTALTHPLTMVYGQPGTGKSWTAVAIACH 2399
Query: 429 MAKQGQ----GQVLVCAPSNVAVDQLAEKI-SATGLKVVRLCAKSREAV---SSPVEHLT 480
Q + G VL+CAP+ A+D ++E + G++ VR+ +K E S +L
Sbjct: 2400 FVNQNRADAAGHVLLCAPTERALDVVSELLLQVPGIRAVRIYSKQAETTVIDGSGHSNLA 2459
Query: 481 LHYQVRHLDT-------SEKSELHKLQQ--------LKDE--QGELSSSDEKKYKALKRA 523
LH +VRH S ++E+ +L Q K E Q +L S +K L A
Sbjct: 2460 LHMRVRHASNPHSKALLSCEAEISRLTQELTSCTDPTKQERTQHKLDSKRQKYNTILATA 2519
Query: 524 TEREISQS-ADVICCTCVGAGDPRL-ANFRFRQVLIDESTQATEPECLIPLVLG---AKQ 578
E+ ++ D+I CTC AG R+ + Q ++DES EPE L+P V +
Sbjct: 2520 EGFELGETPVDIIICTCAEAGSQRMRTHANIAQCIVDESNYCLEPEVLVPAVTAGPRCSR 2579
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP----IRLQVQYRMHPSLSEFP 634
VLVGDH QL PV+ K+A + GL +SLFE L + L Q+RMHPSL +F
Sbjct: 2580 FVLVGDHKQLVPVLQSKEAWKLGLGRSLFEDLWEAHREGSSACCTLNTQHRMHPSLGKF- 2638
Query: 635 SNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL-----NR 689
S+SF+ Q+ ++ + ++ WP ++V E+ S Y+ N
Sbjct: 2639 SSSFFYNVQQSRENVSNACARELEGFWPAGRD--LYHVFCHVEDEPESDCDYIEGGMSND 2696
Query: 690 TEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVD 749
E V ++V + + GV P +I +++P+ QR I++ + + L QL +I + S +
Sbjct: 2697 AEVQKVVEVVESLMSRGVQPFKIWIVSPFLRQRHSILHAL--DSTLGSQL--DIRLTSPE 2752
Query: 750 SFQGREKDYIILSCVR-------SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 802
QG + D ++LS VR + H G G L D ++NV LTRAR G+VI+GN LS
Sbjct: 2753 ECQGAQCDVLVLSTVRGRPRDQLTGPHGGFGCLGDKHQMNVVLTRARKGLVIVGNRYYLS 2812
Query: 803 KQPLWNGLLTHYKEHECLVEG 823
P+WN LL Y+ +C+VE
Sbjct: 2813 GNPMWNRLLHDYEVLDCVVEA 2833
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 205/473 (43%), Gaps = 88/473 (18%)
Query: 389 PELNASQVFAVKSVLQ---RPISLIQGPPGTGKTVTSAAIVYHMAKQGQG------QVLV 439
P LN Q A+ +L RP LI GP GTGKT T A V + + G ++L+
Sbjct: 447 PILNKPQATALSHILDPRPRPPLLIFGPFGTGKTRTIAEAVKELCRLHAGNTAANLRILI 506
Query: 440 CAPSNVAVDQL----------AEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLD 489
C SN A D + +I + +R+C + R S V H L Y +
Sbjct: 507 CTHSNSAADHYIVDYLHPFVTSSEIGPFLCRPLRICWEHR--FFSSVSHTVLKYCL---- 560
Query: 490 TSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLAN 549
+ E G + + + ++ ADV+ V G P +
Sbjct: 561 ------------IDRETGRFAIPSRQDIDCVSVIVTTLVT--ADVL----VKMGLP---S 599
Query: 550 FRFRQVLIDESTQATEPECLIPLVLG--AKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
F V IDE+ QA E E LIPL L + ++VL GDH Q+G + A R L +SL
Sbjct: 600 GYFSHVFIDEAAQAMEAETLIPLCLTQQSTRIVLAGDHLQMGAHVFSPVARRLCLDRSLL 659
Query: 608 ERLVLL----GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV 663
RL L + L YR + + E PS FYEGTL ++ + G ++P
Sbjct: 660 VRLYELYPRESDSKLLLLENYRAYNDIVEIPSKLFYEGTL----IAHKHRPEGSEYP--- 712
Query: 664 PNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR-------SGVVPSQIGVIT 716
+ F+ +G+EE + SY N EAA V + V ++ V +I V+T
Sbjct: 713 ----IRFHGVLGREERAVDRASYYNMAEAAEVSERVEELVKQWRGEDAEDVELRRICVLT 768
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN--------E 768
PY Q I LR+ E+ V SV++ QG E D + +S V + +
Sbjct: 769 PYTAQVREI------RQLLRRSQLGEVRVESVNNVQGLEFDALFISTVHTAFGLTPEMLD 822
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK----QPLWNGLLTHYKEH 817
+ +GFL+DPR LN A+TRA+Y + I+G+P L + W + + EH
Sbjct: 823 NHHLGFLSDPRLLNTAVTRAKYHLTIVGDPNALCGAGKCKACWKIIFSKCSEH 875
>gi|344277503|ref|XP_003410540.1| PREDICTED: hypothetical protein LOC100672714 [Loxodonta africana]
Length = 2104
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 237/448 (52%), Gaps = 44/448 (9%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + +VL+ + +NVAVD++
Sbjct: 1643 PITIIHGVFGAGKSYLLAVVILFFVQLFEKSEASTDGNARPWKVLISSSTNVAVDRVLLG 1702
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G K VR+ S ++ P+ +LH + ++ + ELH L + EL+
Sbjct: 1703 LRSLGFEKFVRV--GSVRKIAKPILPYSLHAGSEN-ESEQLKELHALMR-----EELTPV 1754
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
++ K + K T R + + V+ TC P L + +F V++DE +Q TEP
Sbjct: 1755 EKVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCLNDLKFPVVVLDECSQITEPAS 1814
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KP+ L+ QYR
Sbjct: 1815 LLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPVLLRTQYRC 1874
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP++S ++ FY+G L NGV+ ER W +P + FY G E+I S+
Sbjct: 1875 HPAISTIANDLFYDGNLMNGVSETERSPL---LEW-LPT--LCFYNVKGLEQIERDN-SF 1927
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EAA K++ + + SG+ S IGVIT Y+ Q + + +S + K ++V+
Sbjct: 1928 HNMAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSAVDFDHSNI-KAVQVS 1986
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR R ++I+GN L K L
Sbjct: 1987 TVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGNLACLRKNRL 2043
Query: 807 WNGLLTHYK------EHECLVEGPLNNL 828
W ++ H + +H E LN+L
Sbjct: 2044 WGRVIQHCEGREDGLQHASQCEPQLNHL 2071
>gi|86196492|gb|EAQ71130.1| hypothetical protein MGCH7_ch7g537 [Magnaporthe oryzae 70-15]
Length = 1986
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 252/532 (47%), Gaps = 105/532 (19%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHM------------AKQGQG- 435
+LN Q A+ + + +L+QGPPGTGKT T A+V + K G
Sbjct: 1275 QLNRGQAAAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIKPANGA 1334
Query: 436 ------QVLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAVSSPVEHL 479
++LVCAPSN AVD+L ++ A G+K V+RL +A+++ V +
Sbjct: 1335 DEPMAQKLLVCAPSNAAVDELVLRLKA-GIKDTNGNTHKINVLRLG--RSDAINAAVRDV 1391
Query: 480 TLHYQVRH-LDT------------SEKSELHK---------------------------- 498
TL V+ +D +++ +LH+
Sbjct: 1392 TLDELVKEKMDAALNVNGSGNSGPTDREKLHQEAGEIKVRVAALREALEQARAAGDHGQT 1451
Query: 499 ------LQQLKDEQGELSSS-DEKKYKALKRATEREISQ---------SADVICCTCVGA 542
L +L+ +QG++ + D K A E EI + A V+C T GA
Sbjct: 1452 NSLQRNLDELRKKQGQIGAQIDRDKASGNTYAREAEIKRRNIQQSILSEAHVLCATLSGA 1511
Query: 543 GDPRLANFR--FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G + + F V+IDE+ Q E LIPL GA + +LVGD QL P ++ + AAR
Sbjct: 1512 GHDMFKSLQVEFETVIIDEAAQCVELSALIPLKYGASKCILVGDPKQLPPTVLSQSAARY 1571
Query: 601 GLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINE-RQSSGID 658
G QSLF R+ + L QYRMHP +S +PS FYEG L +G + + RQ D
Sbjct: 1572 GYDQSLFVRMQQNHPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADGSDMAKLRQQPWHD 1631
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF----LRSGVVPSQIGV 714
P P R FF V+ G +E + G S +N E +I T F S + +IG+
Sbjct: 1632 NPLLGPYR--FFDVE-GIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGI 1688
Query: 715 ITPYEGQR-AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+ Q A + R G + + ++IE + D+FQGRE + II SCVR++ GIG
Sbjct: 1689 ITPYKAQLFALRQKFQERWG---EGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIG 1745
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPL 825
F+ D RR+NV LTRAR + ILG+ + L + WN L+ K + +G +
Sbjct: 1746 FMTDIRRMNVGLTRARSSLWILGDSRALRQGEFWNKLIEDSKARDRYTQGSI 1797
>gi|238499341|ref|XP_002380905.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
gi|220692658|gb|EED49004.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
Length = 2122
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 252/537 (46%), Gaps = 108/537 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM-----AKQG----------- 433
+N +Q A+KS L +LIQGPPG+GKT T A+V + QG
Sbjct: 1227 VNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTGVGN 1286
Query: 434 ---------QGQVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSP 475
++LVCAPSN AVD+L + A L V+RL +A+++
Sbjct: 1287 IKPPPRTTTSKKLLVCAPSNAAVDELVMRFKAGVKTIQGRHEKLSVIRL--GRSDAINTN 1344
Query: 476 VEHLTL------------------------HYQVRHLDTSEKSELHKLQQLKDEQGELSS 511
V +TL + + + DT+ K KL Q + + + +
Sbjct: 1345 VLDVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSKLDQCRAQGLPVPA 1404
Query: 512 SDEKKYKALK----------------------------RATEREISQSADVICCTCVGAG 543
E++++ LK R ++EI A VIC T G+G
Sbjct: 1405 ELEREFELLKKKKTALSQEIDNARDKNHSAARDADLNRRKIQQEIIDGAHVICATLSGSG 1464
Query: 544 DPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1465 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1524
Query: 602 LAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
QSLF R+ + + L +QYRMHP +S +P N+FY+G LQ+G + ++ P
Sbjct: 1525 YEQSLFVRMQSNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRAR----P 1580
Query: 661 WPVPN--RPMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGV 714
W P F+ G + +A G S +N R E++V+ F + +IG+
Sbjct: 1581 WHQSELLSPYRFFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDF-QGFDFSGKIGI 1639
Query: 715 ITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+GQ R ++ ++ G ++ I+ + D+FQGRE + II SCVR++ ++GIG
Sbjct: 1640 ITPYKGQLRELKTHFAAKYG---NAIFNMIDFNTTDAFQGRESEVIIFSCVRAS-NKGIG 1695
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
FL+D RR+NV LTRA+ + +LGN + L + WN L+ + +G + + Q
Sbjct: 1696 FLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRRSVYTDGDVLKILQ 1752
>gi|383810355|ref|ZP_09965851.1| AAA domain / AAA domain multi-domain protein [Prevotella sp. oral
taxon 306 str. F0472]
gi|383357100|gb|EID34588.1| AAA domain / AAA domain multi-domain protein [Prevotella sp. oral
taxon 306 str. F0472]
Length = 646
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 247/467 (52%), Gaps = 39/467 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F LP LN +Q AV VL + ++++ GPPGTGKT T + + + QVLVCA
Sbjct: 188 FAPIRLPWLNPTQEKAVNEVLWAKDVAIVHGPPGTGKTTTMVEAINETLMR-ESQVLVCA 246
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSELHK-L 499
SN+AVD ++EK+ G+ V+R+ +R V+ + T + H D + + K +
Sbjct: 247 QSNMAVDWISEKLVDRGINVLRIGNPTR--VNDKMLGFTYERKFEAHPDYPQLWSIRKAI 304
Query: 500 QQLKDEQGELSSSDEKKYKALK-RATEREISQS------ADVICCTCVGAGDPRLANFRF 552
++L++ + S + +K + LK RATE EI + A VI T VGA + +F
Sbjct: 305 RELRNHRKRSSENYHQKMERLKSRATELEIRINSELFGEARVIASTLVGANSRVMEGQKF 364
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 612
+ IDE+ QA E C IP + A +V+ GDHCQL P + A AGL ++L ER+V
Sbjct: 365 TTLFIDEAAQALEAACWIP-IRRASRVIFAGDHCQLPPTVKSLAALHAGLGKTLMERVV- 422
Query: 613 LGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--W-PVPNR 666
KP L+VQYRM+ + F SN FY G +++ I R D P W +
Sbjct: 423 -ENKPEVVTLLKVQYRMNEEIMRFSSNWFYGGQVESAPQIKYRGILDYDNPMVWIDTSDS 481
Query: 667 PMFFYVQMGQEEISA------SGTSY--LNRTEAA-NVEKIVTTFLRSG---VVPSQI-- 712
+ + GQ E + G S+ +N+ EA ++ + + F + G ++ +I
Sbjct: 482 SLENQSEGGQNEDKSIFKEQFVGESFGRINKGEAELTLQTLQSYFTKIGKQRILDERIDV 541
Query: 713 GVITPYEGQRAYIVNYMSRNGALRQQLYKE-IEVASVDSFQGREKDYIILSCVRSNEHQG 771
GVI+PY Q ++ + + + Y+ I V +VD FQG+E+D I++S VRSN+
Sbjct: 542 GVISPYRAQVQFLRGLIKKREFFKP--YRSLISVNTVDGFQGQERDVILISLVRSNDAGQ 599
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHE 818
IGFL D RR+NVA+TRAR ++ILGN + +++ P + L ++ E
Sbjct: 600 IGFLRDLRRMNVAITRARMKLIILGNIQTMTQHPFYKKLWESIEQAE 646
>gi|389646651|ref|XP_003720957.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|351638349|gb|EHA46214.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|440472216|gb|ELQ41092.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae Y34]
gi|440482178|gb|ELQ62693.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae P131]
Length = 2037
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 252/532 (47%), Gaps = 105/532 (19%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHM------------AKQGQG- 435
+LN Q A+ + + +L+QGPPGTGKT T A+V + K G
Sbjct: 1326 QLNRGQAAAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIKPANGA 1385
Query: 436 ------QVLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAVSSPVEHL 479
++LVCAPSN AVD+L ++ A G+K V+RL +A+++ V +
Sbjct: 1386 DEPMAQKLLVCAPSNAAVDELVLRLKA-GIKDTNGNTHKINVLRLG--RSDAINAAVRDV 1442
Query: 480 TLHYQVRH-LDT------------SEKSELHK---------------------------- 498
TL V+ +D +++ +LH+
Sbjct: 1443 TLDELVKEKMDAALNVNGSGNSGPTDREKLHQEAGEIKVRVAALREALEQARAAGDHGQT 1502
Query: 499 ------LQQLKDEQGELSSS-DEKKYKALKRATEREISQ---------SADVICCTCVGA 542
L +L+ +QG++ + D K A E EI + A V+C T GA
Sbjct: 1503 NSLQRNLDELRKKQGQIGAQIDRDKASGNTYAREAEIKRRNIQQSILSEAHVLCATLSGA 1562
Query: 543 GDPRLANFR--FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G + + F V+IDE+ Q E LIPL GA + +LVGD QL P ++ + AAR
Sbjct: 1563 GHDMFKSLQVEFETVIIDEAAQCVELSALIPLKYGASKCILVGDPKQLPPTVLSQSAARY 1622
Query: 601 GLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINE-RQSSGID 658
G QSLF R+ + L QYRMHP +S +PS FYEG L +G + + RQ D
Sbjct: 1623 GYDQSLFVRMQQNHPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADGSDMAKLRQQPWHD 1682
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF----LRSGVVPSQIGV 714
P P R FF V+ G +E + G S +N E +I T F S + +IG+
Sbjct: 1683 NPLLGPYR--FFDVE-GIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGI 1739
Query: 715 ITPYEGQR-AYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+ Q A + R G + + ++IE + D+FQGRE + II SCVR++ GIG
Sbjct: 1740 ITPYKAQLFALRQKFQERWG---EGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIG 1796
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPL 825
F+ D RR+NV LTRAR + ILG+ + L + WN L+ K + +G +
Sbjct: 1797 FMTDIRRMNVGLTRARSSLWILGDSRALRQGEFWNKLIEDSKARDRYTQGSI 1848
>gi|449478203|ref|XP_002195542.2| PREDICTED: probable helicase senataxin [Taeniopygia guttata]
Length = 2162
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 257/549 (46%), Gaps = 117/549 (21%)
Query: 390 ELNASQVFAVKS----VLQRP----ISLIQGPPGTGKTVTSAAIVYHMAKQGQ------- 434
E N Q A+++ V Q P I LI GPPGTGK+ T ++ + ++
Sbjct: 1595 EYNEDQKRAIETAYAMVKQHPGLPKICLIHGPPGTGKSKTIVGLLSRVLRENTRSEKTAR 1654
Query: 435 --------GQVLVCAPSNVAVDQLAEKI----------------SATGLKVVRLCAKSRE 470
+ LVCAPSN AVD+L +KI + +K+VRL A+ +
Sbjct: 1655 EKNSKIKPNRFLVCAPSNAAVDELMKKIIIAFKEKCQNKQEPLGNCGDIKLVRLGAE--K 1712
Query: 471 AVSSPVEHLTLHYQVRHL----------DTSEKSE--------------LHKL------- 499
++++ V +L QV H D +K E +H+
Sbjct: 1713 SINNEVRGFSLDKQVEHRMKRKPGDCDQDIQKKKEALDQKLDMLSRERAMHRCEKREVAS 1772
Query: 500 QQLKDEQGELSSSDEKKYKALK------RATEREISQSADVICCTCVGAGDPRLANFRFR 553
Q L DE G L+ ++ LK + + +I +D+ICCT +G L + R
Sbjct: 1773 QMLNDEIGRLAKERQQLASQLKEVRVHSQKVQADIILESDIICCTLSTSGGSLLESAFSR 1832
Query: 554 Q-------VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
Q V++DE+ Q+ E E LIPL+ ++VLVGD QL P + KA + G QSL
Sbjct: 1833 QGLDPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPKQLPPTVKSIKAQQYGYDQSL 1892
Query: 607 FERL-----------VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
RL +L L ++L VQYRMHP + FPSN Y TL+ I E + S
Sbjct: 1893 MARLQRHLEEQVQQNILHSLPVVQLTVQYRMHPDICLFPSNYVYGRTLKTAKAIEENRCS 1952
Query: 656 GIDFPWPVPNRP-MFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF--LRSGVVPSQI 712
WP +P + F V G+EE SY N E V +++ T R + +I
Sbjct: 1953 S---EWPF--QPYLIFDVADGREE--RDNDSYSNPREVKLVMELIRTIKEKRKDLGLRRI 2005
Query: 713 GVITPYEGQRAYIVNYMSRNGALRQQLYKEI---EVASVDSFQGREKDYIILSCVRSNEH 769
G+ITPY Q+ I + ++K EV +VD+FQGREKD II+SCVR+N
Sbjct: 2006 GIITPYSAQKRKIQEQLD-------SVFKNNSPGEVDTVDAFQGREKDCIIVSCVRANST 2058
Query: 770 QG-IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL 828
+G IGFL+ +RLNV +TRAR+ + ILG + L + WN L+ ++ ++ N
Sbjct: 2059 KGSIGFLSSLQRLNVTITRARFSLFILGRLQTLMEDKNWNHLIQDAQKRGAIIRTTEKNY 2118
Query: 829 KQSMVQFQK 837
K+ ++ K
Sbjct: 2119 KKEALRILK 2127
>gi|452003720|gb|EMD96177.1| hypothetical protein COCHEDRAFT_1201038 [Cochliobolus heterostrophus
C5]
Length = 1973
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 253/543 (46%), Gaps = 101/543 (18%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIV-------------------YHMA 430
+N +Q A+KS + +LIQGPPG+GKT T AIV +
Sbjct: 1270 VNTAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAILSDSLRNRGTAISVPGQQRS 1329
Query: 431 KQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLT 480
+ ++LVCAPSN AVD+L + G+K L +SR +A+ + V+ +T
Sbjct: 1330 EAASKKLLVCAPSNAAVDELVMRFK-DGIKT--LNGESRKVNIVRLGRGDAIKASVQDVT 1386
Query: 481 LHYQVRHL------DTSEKSELHKL--------QQLK---------DEQGELSSSDEKKY 517
L V D +K KL QLK + +G+ ++ E+
Sbjct: 1387 LEELVNQRLGVDPSDGKDKEATQKLFQDHKKISDQLKQAYQQRDSGEVKGKAAAKLEEDI 1446
Query: 518 KALKRAT-------------EREISQSAD---------------VICCTCVGAGDPRLA- 548
AL+R E+ S++AD VIC T G+G
Sbjct: 1447 NALRRQKTALGTKIDNVKDDEKLASRNADLNRRRAQEAVLNEAHVICATLSGSGHEMFQG 1506
Query: 549 -NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
+ F V++DE+ Q E LIPL G + +LVGD QL P + K+AAR QSLF
Sbjct: 1507 LSIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSKEAARFQYEQSLF 1566
Query: 608 ERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVP 664
R+ + L QYRMHP +S FPS +FY+G L +G + + PW +
Sbjct: 1567 VRMQKNHPDDVHLLDTQYRMHPEISLFPSQTFYDGRLLDGGDMAGLRKQ----PWHQSMV 1622
Query: 665 NRPMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVITPYEGQ 721
P F+ GQ+ + G S +N E A + K +T+ ++G+ITPY+ Q
Sbjct: 1623 LGPYRFFDVKGQQAAAPKGHSLINVAEIKVAMQLYKRLTSDYPDYDFKGKVGIITPYKSQ 1682
Query: 722 -RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
R ++M G Q + ++I+ + D+FQGRE + II SCVR++ GIGFL D RR
Sbjct: 1683 LRELKQSFMQVYG---QSIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQDIRR 1739
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPL-NNLKQSMVQFQKPK 839
+NV LTRA+ + +LGN + L + WN L+ + KE +G + L Q +F PK
Sbjct: 1740 MNVGLTRAKSSLWVLGNSESLQRGQYWNKLIVNAKERNRFTDGDVPKMLNQHSSKFPAPK 1799
Query: 840 KIY 842
+ Y
Sbjct: 1800 EGY 1802
>gi|449131912|ref|ZP_21768086.1| DNA-binding protein SMUBP-2 [Rhodopirellula europaea 6C]
gi|448888721|gb|EMB19023.1| DNA-binding protein SMUBP-2 [Rhodopirellula europaea 6C]
Length = 734
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 235/458 (51%), Gaps = 48/458 (10%)
Query: 390 ELNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
ELN Q AV +++ +++I GPPGTGKT T A I+ ++G+ +VL CA SN AVD
Sbjct: 281 ELNPPQRDAVAFAMMADDVAIIHGPPGTGKTTTIAEIIAQSVERGE-RVLACAASNTAVD 339
Query: 449 QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE--KSELHKLQQL---- 502
L E++ VVR+ +R V ++ TL V TS K +L Q+
Sbjct: 340 NLLERLVRLMPNVVRVGHPAR--VFESLQEHTLDALVESDPTSTVIKDLRRELDQILREA 397
Query: 503 -----------KDEQGELSSSDEKKYKALKRATEREISQS----ADVICCTCVGAGDPRL 547
+ ++ EL + + + + + R+ ER I +S ADVIC T + L
Sbjct: 398 NRPIRAGGGRERKQRSELFN-EAGRLRGMIRSQERGIVRSVIDRADVICTTTT-IDEELL 455
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
++ F V++DES Q TEP + +L A +++L GDHCQL P ++ AA+ G+ SL
Sbjct: 456 SDQSFDLVVVDESCQCTEP-GMWQAILRADRLILAGDHCQLPPTVLSDDAAKIGMRDSLM 514
Query: 608 ERLVLLGLKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
+RLV + I RL VQYRM+ S+ F S+ FY+ TL ++ + D P N
Sbjct: 515 QRLVHRYGERIYRRLTVQYRMNESIMRFSSDHFYDSTLIADASVKRHRLC--DLPNVEEN 572
Query: 666 ----RPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPY 718
P+ G +EE+ G S LN EA + ++V GV QI VI PY
Sbjct: 573 DFTTEPLLLIDTAGAGYEEELEPDGQSKLNHGEAKVILQLVKQLADMGVTGDQIAVIAPY 632
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
Q RN +R L IE+ +VD FQGREK+ ++++ RSN IGFL+D
Sbjct: 633 AAQ--------VRNLRMRLDL-DGIEIDTVDGFQGREKEVVLITMTRSNPDGEIGFLSDQ 683
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
RR NVALTRA+ ++++G+ L ++ L ++++
Sbjct: 684 RRSNVALTRAKRKLIVVGDSATLCSHDFYSDLYGYFED 721
>gi|383458482|ref|YP_005372471.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
gi|380730970|gb|AFE06972.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
Length = 653
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 253/530 (47%), Gaps = 74/530 (13%)
Query: 322 PVDINHGF-SVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLP 380
P ++ G +D V +++R++ ++ + + LLG+E P
Sbjct: 129 PAYLSEGLLRLDVVPNDVTYERVRAGLQRVKAMDKGQERHKREVLLGNE----------P 178
Query: 381 RRFG-----APGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQG 435
RF P P Q A++++ L+ GPPGTGK+ A + +G+
Sbjct: 179 PRFDNTKDFTPTRPLNPEQQDAAMRALAAEDFFLVHGPPGTGKSTVLAEVAAQAVARGE- 237
Query: 436 QVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSE 495
++L A SN AVD L E GL+ +R+ +R V++ ++ TL V E +
Sbjct: 238 RLLCTAASNAAVDHLLELCLEQGLRAIRVGHPAR--VAARLQEHTLDIVV-----EEHPD 290
Query: 496 LHKLQQLKDEQGEL---------------------SSSDEKK-----YKALKRATEREIS 529
+ L DE +L SS+ E K + L++ + +
Sbjct: 291 RVVSRDLFDEAFDLFGYARRQRSQGRSRERFSNARSSTAEAKDLMDEARKLEKKAVKAVL 350
Query: 530 QSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLG 589
ADV+C T G LA F + L+DE+TQATEP L+ L A +VVL GD QL
Sbjct: 351 ARADVVCVTLASLGSGVLAGEEFDRALLDEATQATEPLALLGF-LRAPKVVLAGDPQQLP 409
Query: 590 PVIMCKKAARAGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
P ++ ++AA+AGL SLFERL+ ++ L+ QYRM+ ++ FPS Y G L+
Sbjct: 410 PTVLSQEAAKAGLGTSLFERLLQDHGDEVKRMLREQYRMNAAIMAFPSKEMYGGELRAHP 469
Query: 648 TINER-------QSSGIDFPWPVPNRPMFFYVQMGQ---EEISASGTSYLNRTEAANVEK 697
++ +R SG + P P+ + G+ EE+ + S LN EA V
Sbjct: 470 SVADRTLSSVLDSGSGAEVDAP----PVLYLDTAGKGFDEEVEPTTHSLLNPGEATYVIA 525
Query: 698 IVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKD 757
V L G+ P ++ VI PY Q ++ + + ++ E+EV +VD+FQGREKD
Sbjct: 526 RVRQLLSLGLAPREVAVIAPYSAQARHLREAL-------EAVHPEVEVDTVDAFQGREKD 578
Query: 758 YIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 807
I++S RSN +GFLND RR+NVALTRAR + ++G+ LS P +
Sbjct: 579 AILVSMTRSNSEGQLGFLNDLRRMNVALTRARRHLFVVGDSATLSSHPFY 628
>gi|110637960|ref|YP_678167.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
gi|110280641|gb|ABG58827.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
Length = 611
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 171/569 (30%), Positives = 280/569 (49%), Gaps = 61/569 (10%)
Query: 280 GDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTS 339
GD++R+ +S + + VI +A V ++L + + +D ++ S
Sbjct: 62 GDKVRI-FSNQQHNTKEDFIDGVITASAGNLVTVQLMKDEAPDWLSDGKIGMDKLFDKHS 120
Query: 340 FDRMQGAMKTFAVDE--TSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVF 397
++ M + +A D+ T S + +LG E NT + AP ++ + +
Sbjct: 121 YETMLSTLDYWASDDGLTKDSIRLRDVILG---EKTASFNT-KENYAAPDKLDITQKKAW 176
Query: 398 AVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISAT 457
K++ + +++I GPPGTGKT T IV + ++G+ +VLVCA SN AVD L E+++A
Sbjct: 177 E-KAIQAQDVAIIHGPPGTGKTTTIVEIVKTLIEKGE-RVLVCASSNAAVDVLTERLAAR 234
Query: 458 GLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKSELHK-LQQLKDEQGELSSSDEK 515
GL VVRL S+ + L Y + R + E+ L K L++ +E +++ ++
Sbjct: 235 GLPVVRLGNPSK------ITEQNLQYCLDRQVVNHEQFGLVKELKKRAEEFFRMANKYKR 288
Query: 516 KYKALKRATEREISQSA----------------------DVICCTCVGAGDPRLANFRFR 553
+ +R + I + A V+ CT V + + +F
Sbjct: 289 NFDREEREQRKAILKEARNLRGQADDHLHFLQQNVLVKNQVVTCTPVVSMHREIGKEKFD 348
Query: 554 QVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
++ DES Q EP C IP + K+V+L GDH QL P + +AA+ GLA SL E+L+ L
Sbjct: 349 TLIFDESGQTMEPMCWIP-IQKVKKVILAGDHLQLPPTVKSDEAAKKGLAISLLEKLMPL 407
Query: 614 -GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYV 672
G+ + L +QYRM+ + +FPS FY+ L+ ++ + + + F
Sbjct: 408 PGISEM-LAIQYRMNEKIMQFPSQWFYDNKLEAHGSVKDH---------AFDDDVIQFID 457
Query: 673 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 729
G +EE+ + N+ EA V I+ S IG+I+PY+ Q YI
Sbjct: 458 TAGTGYEEELVGAPFGIRNKQEADLVLAILNNVAELNKQAS-IGIISPYKLQIQYI---- 512
Query: 730 SRNGALRQQLY-KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
R + Q++ K I+V +VD FQG+EKD II+S VRSN Q IGFL D RR+NVA+TRA
Sbjct: 513 -REQLIEQKITSKNIQVQTVDGFQGQEKDIIIISLVRSNGKQEIGFLKDLRRMNVAITRA 571
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R ++++G+ LS + G + + H
Sbjct: 572 RKKLIVIGDSSTLSSSKFYAGFQEYIESH 600
>gi|390356226|ref|XP_003728733.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Strongylocentrotus purpuratus]
Length = 1100
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 278/582 (47%), Gaps = 87/582 (14%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AV L QR +++I GPPGTGKT T ++ KQ ++L CA SNVAVD
Sbjct: 201 LNESQRDAVTFALCQREVAVIHGPPGTGKTTTVVEVIQQAVKQNM-KILACAASNVAVDN 259
Query: 450 LAEKISATG-LKVVRLCAKSR----------EAVSSPVEHLTLHYQVRH-LDTSEKSELH 497
L E++SA +VRL +R +A+ + + ++ +R LDT+ L
Sbjct: 260 LLERLSANASCSMVRLGHPARLLPSIQRFALDAILASSDGASIVRDIRRDLDTT----LS 315
Query: 498 KLQQLKDEQGELSSSDEKKY--KALKRATER---EISQSADVICCTCVGA---GDPR-LA 548
++++ KD+ + DE KY K LK ++ +I +ADV+ T A G R L
Sbjct: 316 QIRKTKDKDEKHRLKDEMKYLRKDLKSREQKAIQDILMAADVVLATNTSASTNGPLRALQ 375
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM---------CKKAAR 599
F V+IDE Q+ E C IPL L A++ +L GDH QL IM C AA+
Sbjct: 376 QGHFDLVVIDECAQSLEAACWIPL-LNARKCLLAGDHHQLPATIMSKQXKXKETCFTAAK 434
Query: 600 AGLAQSLFERLV-LLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
GLA S+ ER++ L G + ++ L QYRM+ + + S+ Y+G LQ+ ++
Sbjct: 435 EGLATSMMERIIDLYGNRVVQMLTTQYRMNDEIMRWSSDQLYDGKLQSHQSVATHLLK-- 492
Query: 658 DFPWPVPNR----PMFFYVQMG--------QEEISASGTSYLNRTEAANVEKIVTTFLRS 705
D P + N P+ G ++E+S N EA V V+ + S
Sbjct: 493 DMPCIMENENTTLPLLLIDTAGCDVLELELEDEVSKG-----NEGEADIVSHHVSNLISS 547
Query: 706 GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 765
G+ P++I VI PY Q + +S Y +E+ SVD FQGREK+ +++S VR
Sbjct: 548 GLSPAKIAVIAPYNLQVDLLRLRLSSK-------YPGLEIKSVDGFQGREKEAVVISLVR 600
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH-ECLVEGP 824
SN+ +GFL + RR+NVA+TRAR + ++ + + + K P L+ ++ +H E
Sbjct: 601 SNDRGEVGFLKEDRRINVAITRARRHLAVVCDSQTVGKHPFLKSLVDYFNDHGEVRTAFE 660
Query: 825 LNNLKQSMVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPN 884
N + S + +P D +F S ++ +G++A G +P G
Sbjct: 661 YNEVLTSSLGAPRP-----DHLVF-------------KSKTSSSHKGTKATGAVPKGQRK 702
Query: 885 G-THKPGLH--PAGFPMPRVPLPPFQGGPPSQPYAIPSRGAV 923
G T KP + + PR F+ S + GAV
Sbjct: 703 GQTKKPEVTVLTSSLGAPRPDHLVFKSKTSSSHKGTKATGAV 744
>gi|167386218|ref|XP_001737669.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899439|gb|EDR26028.1| hypothetical protein EDI_014080 [Entamoeba dispar SAW760]
Length = 964
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 174/297 (58%), Gaps = 12/297 (4%)
Query: 527 EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
EI + IC T + +F ++DE+ Q+ EPE L ++ ++ VL+GD
Sbjct: 614 EILNGIECICSTLTICTRSTILKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDIQ 672
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVL-LGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQN 645
QL P + +A AG +S+FER + +K L+ QYRMHP++ EF + FY L+N
Sbjct: 673 QLQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAIVEFSNKMFYSSKLEN 732
Query: 646 GVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS 705
GV+ +R S I +P P+ F G+E+ +SGTSY N E +++IV L++
Sbjct: 733 GVSNEDRFDSRIINFFPDYTNPIMFINCDGREQYGSSGTSYNNEGEVLIIKQIVDGLLKN 792
Query: 706 GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 765
V ++IG+I+PY+ Q+ I Y+S +I+VA++D FQG EK+YII SCVR
Sbjct: 793 KVKENEIGIISPYQAQQELISQYIS----------TKIKVANIDGFQGNEKEYIIFSCVR 842
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVE 822
SN+ GIGF++D +RLNVALTRA+ G++++GN + L +W+ L+ H+ + L E
Sbjct: 843 SNQTLGIGFVSDYKRLNVALTRAKCGLIVIGNIQTLIGSKVWDMLIHHFYLRDALFE 899
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 379 LPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMA-------- 430
L ++ P L LN Q+ A+ + L ISL+ GPPGTGKT + +I ++
Sbjct: 353 LTDKYNIPNLSNLNDYQIKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKHRFYN 412
Query: 431 -KQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
+ + ++LVCA SN AVD + K+ G+ +R+ A
Sbjct: 413 RNRAERRLLVCASSNNAVDVICSKLIEKGIPTIRIVA 449
>gi|302656653|ref|XP_003020078.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
gi|291183859|gb|EFE39454.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
Length = 2139
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 192/651 (29%), Positives = 287/651 (44%), Gaps = 136/651 (20%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM----------------AKQ 432
+LN +Q A+KS + +LIQGPPG+GKT T AIV + +
Sbjct: 1302 DLNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALLTPILAERKVPQPKIASDS 1361
Query: 433 GQG-------QVLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAVSSP 475
Q ++LVCAPSN AVD+L + G+K V+RL +A+++
Sbjct: 1362 AQASKSAPSKKLLVCAPSNAAVDELVMRFKE-GVKTLNGKTQPISVIRL--GRSDAINAN 1418
Query: 476 VEHLTL----HYQVRHLDTSEKSELHKLQQLKDEQGE---------------------LS 510
V +TL + ++ D + E LQ +E E +S
Sbjct: 1419 VLDVTLDELVNAKLNQSDQKKNGEERDLQSYFNEHKETSAKFIEIRQRIDQCRTRAEPVS 1478
Query: 511 SSDEKKYKALKRA----------------------------TEREISQSADVICCTCVGA 542
+ E+++ LKR ++EI A VIC T G+
Sbjct: 1479 NELEREFDLLKRKKAQLSQAIDNARDKNHAAARNAELTRRRIQQEIIDGAHVICSTLSGS 1538
Query: 543 GDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G + F V+IDE+ Q+ E LIPL G + VLVGD QL P ++ K+A+R
Sbjct: 1539 GHEMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRF 1598
Query: 601 GLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQSSG 656
QSLF R+ + L QYRMHP +S+FPS +FY+G LQ+G + ++ G
Sbjct: 1599 QYEQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHG 1658
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANV----EKIVTTFLRSGVVPSQI 712
+ P FF VQ G +A G S +N E E++V + R+ +I
Sbjct: 1659 SELLGPY----RFFDVQ-GMHSSAAKGHSLVNIAELTVAMRLYERLVADY-RNYDFAGKI 1712
Query: 713 GVITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 771
G+ITPY+GQ R + ++ G+ ++ +E + D+FQGRE + II SCVR+++ +G
Sbjct: 1713 GIITPYKGQLRELKSRFAAKYGS---SIFTAVEFNTTDAFQGRECEVIIFSCVRASD-RG 1768
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQS 831
IGFL+D RR+NV LTRA+ + +LGN + L + W L+ +E + EG + + Q
Sbjct: 1769 IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARERQLYTEGDILRILQK 1828
Query: 832 MVQFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGL 891
Q ++ N + A G +P S R GS G PP+ P
Sbjct: 1829 -PQISLDMELNNVEMVDAPAEVGNIPTPSS-------RPGSSMAGSSNSRPPSRLSNP-- 1878
Query: 892 HPAGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFG 942
Q S P +PS AV P+ + P G G
Sbjct: 1879 ---------------QSAAESLPSELPSGSAVGTPIPCLPDGPSGGKSGLN 1914
>gi|296806473|ref|XP_002844046.1| DNA-binding protein SMUBP-2 [Arthroderma otae CBS 113480]
gi|238845348|gb|EEQ35010.1| DNA-binding protein SMUBP-2 [Arthroderma otae CBS 113480]
Length = 720
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 255/542 (47%), Gaps = 74/542 (13%)
Query: 338 TSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQM-VRNTLPRRFGAPGLPELNASQV 396
++ RM M E S + L GH + + + P F P L N SQ
Sbjct: 184 VTYRRMNQTMMKLEKMEESEYSQLIRVLFGHTTPSPLDLESVGPLEFMDPSL---NDSQR 240
Query: 397 FAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS 455
AV+ L R I+LI GPPGTGKT T ++ + + + ++LVC PSN++VD + E+++
Sbjct: 241 EAVRFALASREIALIHGPPGTGKTHTLIELIRQLVLRKK-RILVCGPSNISVDNIVERLA 299
Query: 456 ATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE 505
+ + +VR+ +R E +S E + VR ++++ + K + ++
Sbjct: 300 SHKVPLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDAKQASIRKTRNGRER 359
Query: 506 QGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQA 563
+ E K+++ + I + V+ T GAG +L N +F VLIDE++QA
Sbjct: 360 RAIYGDLRELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQA 419
Query: 564 TEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR------------------------ 599
E +C IPL L A +V+L GDH QL P I K +++
Sbjct: 420 REAQCWIPL-LAASKVILAGDHLQLPPTIKSKVSSKPSEGNSVLRDQTDLDTNDLSKLDM 478
Query: 600 AGLAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
L +LF+RL+ L G+K + L QYRMH + +FPS+ YE L + ER
Sbjct: 479 RNLEITLFDRLLSLHGPGIKRM-LTTQYRMHQMIMDFPSHELYESKLIAAGAVKERLLK- 536
Query: 657 IDFPWPVPN-----RPMFFYVQMGQE--EISASGTSYL----------NRTEAANVEKIV 699
D P+ V P+ FY G + E S T L N EAA V + V
Sbjct: 537 -DLPYEVEETDDTREPLIFYDTQGGDFPEKSPDSTGILAKSVLVESKCNDMEAAVVARHV 595
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
+ +GV P I VITPY Q A + + ++ + +E+ SVD FQGREK+ +
Sbjct: 596 EKLVSAGVRPDDIAVITPYNAQVALLSQLL-------KEKFPTLELGSVDGFQGREKEAV 648
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNP-KVLSKQPLWNGLLTHYKEHE 818
++S VRSN +GFL + RRLNVA+TR R + + G+ V S P L +E+
Sbjct: 649 VVSLVRSNLDHEVGFLGEKRRLNVAMTRPRRHLCVCGDSVTVSSGSPFLKRWLAFLEENA 708
Query: 819 CL 820
L
Sbjct: 709 DL 710
>gi|221126908|ref|XP_002162756.1| PREDICTED: uncharacterized protein FLJ44066-like [Hydra
magnipapillata]
Length = 927
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/425 (32%), Positives = 226/425 (53%), Gaps = 40/425 (9%)
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMAK-----------QGQGQVLVCAPSNVAVDQLAEKIS 455
++LI G G+GK+ + +V + + + ++LV + +NVAVD++ + +
Sbjct: 497 VTLIHGVFGSGKSYLLSTVVVFLVHLFAMIESLTNGKMKMKLLVSSATNVAVDRVLQGLL 556
Query: 456 ATGLK-VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDE-QGELSSSD 513
G + +R+ S + ++ + T+H + + E H+L++L D + ELS D
Sbjct: 557 DLGFENFIRV--GSVKKIAKSILPYTVH--------ASEEEDHELRELNDLLKTELSDKD 606
Query: 514 E----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECL 569
+ K + K R+ +V+ TC P L F+ L+DE TQ TEP C+
Sbjct: 607 KGYVRKAIEQHKLGVNRKKLTDVNVVGVTCAACVFPYLQKLEFKVQLLDECTQMTEPLCM 666
Query: 570 IPLV-LGAKQVVLVGDHCQLGPVIMCKKAAR-AGLAQSLFERLVLLGLKPIRLQVQYRMH 627
+P+ ++++LVGD QL P I ++ GL +LFER+ L LKP L+ QYR H
Sbjct: 667 LPIARFHCERLILVGDPKQLSPTIQGSESDHDMGLELTLFERMQRLFLKPFVLRTQYRCH 726
Query: 628 PSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 687
PS+S + FY+ L +GVT N+RQ V P ++ + +E SY
Sbjct: 727 PSISSICNKMFYDNMLLDGVTANDRQK-------LVNWLPTLSFIDVNGQEQCDFENSYS 779
Query: 688 NRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRN-GALRQQLYKEIEVA 746
N EA V ++ +G+ P+Q+GVIT Y+ Q A I +++ + + K I+++
Sbjct: 780 NVCEAQFVVNLLELIFETGIEPNQVGVITQYKSQVAKIASFLRESKSCITSSNLKAIQMS 839
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVRS + IGF++ P R NVAL+RA+ +VI GN K+L+
Sbjct: 840 TVDAFQGAEKEIIILSCVRS---RHIGFIDCPFRTNVALSRAKRHLVIAGNKKLLTSNAC 896
Query: 807 WNGLL 811
WNG+L
Sbjct: 897 WNGVL 901
>gi|121704136|ref|XP_001270332.1| tRNA-splicing endonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119398476|gb|EAW08906.1| tRNA-splicing endonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 2137
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 158/536 (29%), Positives = 253/536 (47%), Gaps = 106/536 (19%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQG-------------- 435
+N +Q A+KS L +LIQGPPG+GKT T A+V + G
Sbjct: 1291 VNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSNVLGNQGVAISRPTGVTN 1350
Query: 436 -----------QVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSP 475
++L+CAPSN AVD+L + L V+RL +A+++
Sbjct: 1351 SRPPVRTTTSKKLLICAPSNAAVDELVMRFKEGVKTIQGRQEKLSVIRLGRS--DAINTN 1408
Query: 476 VEHLTL------------------------HYQVRHLDTSEKSELHKLQQ---------- 501
V +TL + + + DT+ K K+ Q
Sbjct: 1409 VLDVTLDELVNARLSQNPRKDGGERDLQKIYMEHKAADTAFKETRAKIDQCRAQGLPVPE 1468
Query: 502 --------LKDEQGELS----SSDEKKYKALK------RATEREISQSADVICCTCVGAG 543
+K ++ +LS ++ ++ + A + R ++EI + A +IC T G+G
Sbjct: 1469 ELSREFDLMKKKKTQLSQEIDTARDRNHSAARDADLNRRRIQQEIIEGAHIICATLSGSG 1528
Query: 544 DPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1529 HEMFQNLSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1588
Query: 602 LAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
QSLF R+ + + L QYRMHP +S +PS +FY+G L++G + + ++ P
Sbjct: 1589 YEQSLFVRMQANHPRDVHLLDTQYRMHPEISAYPSAAFYDGKLRDGPNMAQLRAR----P 1644
Query: 661 WPVPN--RPMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVI 715
W P F+ G + + G S +N E A + + +TT R +IG+I
Sbjct: 1645 WHQSELLSPYRFFDVQGLHQNTTKGHSLINLAELRVAMQLYERITTDFRDYDFSGKIGII 1704
Query: 716 TPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGF 774
TPY+GQ R + +R G ++ +++ + D+FQGRE + II SCVR++ ++GIGF
Sbjct: 1705 TPYKGQLRELKTQFAARYG---NSIFNKVDFNTTDAFQGRESEIIIFSCVRAS-NKGIGF 1760
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
L+D RR+NV LTRA+ + +LGN + L + WNGL+ + G + + Q
Sbjct: 1761 LSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLIKDSRRRNVYTSGDILEILQ 1816
>gi|327274126|ref|XP_003221829.1| PREDICTED: hypothetical protein LOC100561644 [Anolis carolinensis]
Length = 2087
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 248/463 (53%), Gaps = 48/463 (10%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHM------------AKQGQGQVLVCAPSNVAVDQLAEK 453
PI++I G G+GK+ A ++ + K +VL+ + +NVAVD++
Sbjct: 1629 PINVIHGVFGSGKSYLVAIVILFLIEIFETREATNSKKSVPWKVLISSSTNVAVDRILLC 1688
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHY----QVRHLDTSEKSELHKLQQLKDEQGE 508
+ G + +R+ S ++ PV +LH + HL E L K E+G
Sbjct: 1689 LLDLGFDEFIRV--GSVRKIAKPVLPYSLHAGSGPENEHL--KELFALMKEDLTPAEKGY 1744
Query: 509 LSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T + + Q V+ TC P + N F V++DE +Q TEP
Sbjct: 1745 V----RKTIELHKLGTNKALLQQVKVVGVTCAACPFPCMKNLTFPIVILDECSQMTEPAS 1800
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ +++VLVGD QL P I ++A GL Q+LF+R+ L+G +PI L+ QYR
Sbjct: 1801 LLPVARFECEKLVLVGDPKQLPPTIQGSESAHGNGLEQTLFDRMCLMGYEPILLRTQYRC 1860
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP++S ++ FYEG L NG++ +R S ID W +P + FY G E++ S+
Sbjct: 1861 HPAISAIANDLFYEGNLLNGISEKDR-SPLID--W-LPT--LCFYNVNGFEQMERDN-SF 1913
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQ--LYKEIE 744
N EA + K++ + + SG S IGVIT Y+ Q + I N + GA++ L K ++
Sbjct: 1914 HNMAEAFFIVKLIQSMIASGAEGSMIGVITLYKSQMSKICNLL---GAVQSDASLIKAVQ 1970
Query: 745 VASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ 804
V++VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR + ++I+GN L K
Sbjct: 1971 VSTVDAFQGAEKEIIILSCVRTKQ---VGFIDSEKRVNVALTRGKRHLLIVGNLNCLRKN 2027
Query: 805 PLWNGLLTHYKE------HECLVEGPLNNLKQSMVQFQKPKKI 841
+W ++ H E H +E LN++ +S ++ +K ++I
Sbjct: 2028 KVWGSVIQHCTERKNGLQHVNQLEQQLNDIIKSYMERKKAEEI 2070
>gi|380772504|gb|AFE61892.1| hypothetical protein [Mus musculus]
Length = 1843
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 230/435 (52%), Gaps = 44/435 (10%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + + +VLV + +NVAVD++
Sbjct: 1389 PITVIHGVFGAGKSYLLAVVILFLVELFEKCDSGTVGNARPWKVLVSSSTNVAVDRVLLG 1448
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHY-------QVRHLDTSEKSELHKLQQLKDE 505
+ + G K +R+ S ++ PV +LH Q++ L+ K EL ++++
Sbjct: 1449 LLSLGFEKFIRV--GSVRKIAKPVLPYSLHAGSDNESEQLKELNALLKEELTPIERVYVR 1506
Query: 506 QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATE 565
K + K T R + + V+ TC P L + +F V++DE +Q TE
Sbjct: 1507 ---------KSIEQHKLGTNRVLLKQVRVVGVTCAACAFPCLNDLKFPVVVLDECSQMTE 1557
Query: 566 PECLIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQ 623
P L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KP+ L+ Q
Sbjct: 1558 PASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPVLLRTQ 1617
Query: 624 YRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASG 683
YR HP++S ++ FYEG+L NG++ ER G W +P + FY G E++
Sbjct: 1618 YRCHPAISAIANDLFYEGSLVNGISERER---GPVLEW-LPT--LCFYNVTGAEQVEREN 1671
Query: 684 TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S++N EA K++ + + SG+ IGVIT Y+ Q I N +S + K +
Sbjct: 1672 -SFVNVAEATFTLKLIQSLMASGIESCMIGVITLYKSQMYKICNLLSAVDVGHPDV-KAV 1729
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+V++VD+FQG EK+ ILSCVR+ + +GF++ +R+NVALTR R ++I+G+ L K
Sbjct: 1730 QVSTVDAFQGAEKEITILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGSLSCLRK 1786
Query: 804 QPLWNGLLTHYKEHE 818
LW ++ H + E
Sbjct: 1787 NRLWGRVIQHCEGRE 1801
>gi|260833184|ref|XP_002611537.1| hypothetical protein BRAFLDRAFT_63825 [Branchiostoma floridae]
gi|229296908|gb|EEN67547.1| hypothetical protein BRAFLDRAFT_63825 [Branchiostoma floridae]
Length = 3500
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/462 (32%), Positives = 223/462 (48%), Gaps = 58/462 (12%)
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-----VL 438
G G LN Q AV+ L P +IQGPPGTGKTVT A + Y AK+ + V+
Sbjct: 2573 GHQGSVNLNNYQRTAVQRALCCPFYVIQGPPGTGKTVTGAHLAYKFAKRNRNARSGDVVM 2632
Query: 439 VCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV----------------EHLTLH 482
C PSN +VD +AE + GLK++R+ +K E P+ +TLH
Sbjct: 2633 YCGPSNKSVDVVAELLMNCGLKILRVYSKRIEETDYPIPTYPRSSQNKKSNEKLRSITLH 2692
Query: 483 YQVRHLDTSEKSELHKLQQL----KDEQGELSSSDEKKYKALKRATEREISQSADVICCT 538
+ +R T +L ++++ + EQ +S D Y L + + D++ CT
Sbjct: 2693 HVIRQPGTPYGQQLREMEETFRRKQLEQEPISDGDVDTYLQLIWMASCQRIKGVDILLCT 2752
Query: 539 CVGAGDPRLAN--FRFRQVLIDESTQATEPECLIPL-VLGAKQVVLVGDHCQLGPVIMCK 595
C A D + ++ +Q +IDE+ EPE LIP+ +QVVL+GDH QL P++
Sbjct: 2753 CNVAADKKFSSEPAPVKQCIIDEAGMCMEPESLIPISSFALQQVVLIGDHQQLQPIVAQP 2812
Query: 596 KAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
A GL SLF+R K LQ+QYRMH + EFPS+ FY+ L+ ++ R+
Sbjct: 2813 DARDLGLGVSLFQR---HAEKAFMLQIQYRMHEKICEFPSHQFYDNKLETAESVKARRPD 2869
Query: 656 GI-DFPWPVPNRPMFFYVQMGQEE---ISASGTSYLNRTEAANVEK----IVTTFLRSGV 707
+ D WP P+ F G EE ++++ ++++ V K + +R V
Sbjct: 2870 MVPDSFWPSTGNPVVFCHVEGVEEALPVASAEGGVMSQSNQQEVHKVVQVVNDLVVRHHV 2929
Query: 708 VPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
SQI V++PY Q I L+++ + V ++ QG E DY+ILS VRS
Sbjct: 2930 KTSQIAVLSPYRAQVHQITE------TLKERKLDTVSVRTIVDSQGSEWDYVILSTVRSL 2983
Query: 768 EHQGI-------------GFLNDPRRLNVALTRARYGIVILG 796
I GFL D ++NV LTRAR G +I+G
Sbjct: 2984 PQGEIPTQPPRRWMKDQLGFLTDDHQINVGLTRARRGFIIVG 3025
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 200/465 (43%), Gaps = 100/465 (21%)
Query: 391 LNASQVFAVKSV-----LQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 445
LNA Q A + + P L+ GP GTGKT T AA A+Q ++L+C SN
Sbjct: 617 LNAMQREAFSKITAHIDIAIPPVLLIGPFGTGKTHTIAAAASVAAQQSGSRILICTHSNS 676
Query: 446 AVDQL------AEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKSELHK 498
A D +++S + ++R+ K R+ T+H V +H T+E S
Sbjct: 677 AADLYIRNFLKKDELSGSHASLLRIYYKKRKKA-------TVHPDVLQHCVTNEDS---- 725
Query: 499 LQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR---FRQV 555
+ + T E+S + VI + R F +
Sbjct: 726 --------------------SFRYPTREEVSAAKIVITTLSLSLVLEREVGLEAGFFTHI 765
Query: 556 LIDESTQATEPECLIPLVLGAKQ--VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
++DE+ QA E E + PL L + VVL GDH QL P + A G QSL ERL
Sbjct: 766 MVDEAAQALECEAITPLSLATAKTRVVLAGDHMQLSPKVFSSFAREKGFHQSLLERLFYH 825
Query: 614 --------GLKP--IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV 663
L P L YR H + +FPS FY G L + +E + FP
Sbjct: 826 YQQMVPDDDLHPCITLLHENYRCHDDILKFPSKVFYGGKL---ICRSEAKRHPNFFPLA- 881
Query: 664 PNRPMFFYVQMGQEEISASGTSYLNRTE----AANVEKIVTTF------LRSGVVPSQIG 713
F+ V GQ+ + + TS+ N E A VE + ++ ++ + +QIG
Sbjct: 882 -----FYAVAYGQDSVDNTSTSFYNDAEVWELADRVEALWNSWPEEEWGEKNTISMAQIG 936
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE----H 769
V+TPY+ Q VN + ALR++ + V +V + QG+E + LS VR+ E
Sbjct: 937 VVTPYQDQ----VNRI--RLALRRKRLGRVTVETVTNVQGKEYRALFLSTVRTRETCCGE 990
Query: 770 QGIG-------------FLNDPRRLNVALTRARYGIVILGNPKVL 801
Q I FL+DP+ LN A+TRA+ + ++G+P L
Sbjct: 991 QNISTQGTDKEQTSDFRFLSDPKLLNTAITRAKSFVGVVGDPVSL 1035
>gi|449437623|ref|XP_004136591.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
gi|449501878|ref|XP_004161482.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
Length = 647
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 223/456 (48%), Gaps = 46/456 (10%)
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ L + + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 197 LDHSQKDAISKALSGKNVFLLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGEL 509
+ E++ +K+VR+ +R + V L QV D S + D + E+
Sbjct: 256 IVERLVPHRVKLVRVGHPAR--LLPQVLESALDAQVLRGDNSSLA--------NDIRKEM 305
Query: 510 SSSDEKKYKALKRATEREISQ----------------------SADVICCTCVGAGDPRL 547
+ + K KA R T REI + ++DV+ T GA +L
Sbjct: 306 KALNGKLLKAKDRNTRREIQKELRTLSKEERNRQQLAVTDVIKNSDVVLTTLTGAFSRKL 365
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
N F V+IDE+ QA E C I L L A + +L GDH QL P I +A + GL ++LF
Sbjct: 366 NNISFDLVIIDEAAQALEIACWIAL-LKASRCILAGDHLQLPPTIQSVEAEKKGLGRTLF 424
Query: 608 ERLVLLGLKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI-DFPWPVP 664
ERL + + L VQYRMH + ++ S Y+ ++ ++ + D
Sbjct: 425 ERLAEMYGNEVTSMLTVQYRMHELIMDWSSKELYDSKIKAHSSVAAHMLYDLEDVKKTSS 484
Query: 665 NRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQ 721
P + + EE S LN EA ++SGV PS IG+ITPY Q
Sbjct: 485 TEPTLLLIDIAGCEMEERKDEEESTLNEGEAEVAMAHAKRLIQSGVQPSDIGIITPYAAQ 544
Query: 722 RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
+ S + L K+IE+++VD FQGREK+ II+S VRSN + +GFL+D RR+
Sbjct: 545 VVLLKTLRSNDDKL-----KDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 599
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
NVA+TRAR ++ + ++ L+ +++E+
Sbjct: 600 NVAVTRARRQCCLVCDTDTVTYDAFLKRLIEYFEEN 635
>gi|367042072|ref|XP_003651416.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
gi|346998678|gb|AEO65080.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
Length = 2051
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 247/530 (46%), Gaps = 97/530 (18%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV--------------YHMAKQG- 433
+LN Q A+ + + +LIQGPPGTGKT T A+V +A+ G
Sbjct: 1316 QLNPGQARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSNGGVALARPGG 1375
Query: 434 --------QGQVLVCAPSNVAVDQLAEKISA-------TGLKVVRLCAKSREAVSSPVEH 478
++LVCAPSN AVD+L ++ A T K+ L +A+++ V+
Sbjct: 1376 AAPAGSAPSKKLLVCAPSNAAVDELVLRLKAGVKTMNGTTHKIEVLRLGRSDAINAAVKD 1435
Query: 479 LTLHYQVR-----HLDTSEKSELHKLQQ----LKDEQGELS-------SSD--------E 514
+TL VR ++ S+ KL Q LK++ EL +SD +
Sbjct: 1436 VTLDELVRIRMEAEINNGGPSDREKLHQEAGELKEKVAELKPQLEAARASDNRALAMKLQ 1495
Query: 515 KKYKALKR-------------------ATEREISQ---------SADVICCTCVGAGDPR 546
+++ LKR A E EI + A V+C T G+G
Sbjct: 1496 REFDELKRRQAHIGAKIDAQKSDGNTFAREVEIKRRQIQQDILDKAQVLCATLSGSGHEM 1555
Query: 547 LANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
N F V+IDE+ Q E LIPL G + +LVGD QL P ++ + AAR G Q
Sbjct: 1556 FKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQ 1615
Query: 605 SLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW-- 661
SLF R+ K + L +QYRMHP +S FPS FYEG LQ+G + + + PW
Sbjct: 1616 SLFVRMQKNHAKDVHLLDMQYRMHPEISRFPSKVFYEGLLQDGADMGKLRLQ----PWHQ 1671
Query: 662 PVPNRPMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVITPY 718
V P F+ G +E S +N E A + + T + + +IG+ITPY
Sbjct: 1672 SVLLGPYRFFDVKGSQERGPKNQSLVNEEELKVALQLYRRFRTDYSNVDLKGKIGIITPY 1731
Query: 719 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 778
+ Q + + + + +EIE + D+FQGRE + II SCVR++ GIGF+ D
Sbjct: 1732 KAQLFRLRQRFTEKYG--EGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDI 1789
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL 828
RR+NV LTRA+ + ILG+ + L + W L+ K+ + G + L
Sbjct: 1790 RRMNVGLTRAKSSLWILGDSRALVQGEFWAKLIEDAKQRDRYTNGNIMAL 1839
>gi|213405365|ref|XP_002173454.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
gi|212001501|gb|EEB07161.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
Length = 1719
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 170/529 (32%), Positives = 252/529 (47%), Gaps = 105/529 (19%)
Query: 407 ISLIQGPPGTGKTVTSAAIV---------YHMAK--------QGQGQVLVCAPSNVAVDQ 449
+LIQGPPGTGKT T IV YH+ + + + ++L+CAPSN AVD+
Sbjct: 1157 FTLIQGPPGTGKTKTIVGIVSALLLDLNNYHITRPDSKQDSEKTKQKILLCAPSNAAVDE 1216
Query: 450 LAEKI---------SATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHL------DTSEKS 494
+ ++ S K+VR+ + E+V+ V ++ YQ D E +
Sbjct: 1217 VILRLKRGFTLQDGSTYKPKLVRI--GNAESVNMYVRDTSIEYQTEKQLLEVCNDLPELT 1274
Query: 495 ELHKLQQLKD-------------------------------------EQGELSSSDEKKY 517
L +L +D EQ L+ ++
Sbjct: 1275 VLKELTHWRDVYYDSLQAIENLQKQLDIAKSINENVDAVSTELNKMFEQKNLAEQKIDEF 1334
Query: 518 KALKRA-------TEREISQS----ADVICCTCVGAGDPRLA--NFRFRQVLIDESTQAT 564
+ K A T R+I Q+ DV+C T G+G +A N F V+IDE+ QA
Sbjct: 1335 QDHKIARNRDLDMTRRKIQQALLKECDVVCSTLSGSGHELVARANLTFNTVIIDEAAQAV 1394
Query: 565 EPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRL-QVQ 623
E + +IPL GA + VLVGD QL P I+ KKA + +QS+F R+ + + L +Q
Sbjct: 1395 ELDTIIPLKYGAARCVLVGDPNQLPPTILSKKAVKLNYSQSMFVRIQNNFPEQLELLSIQ 1454
Query: 624 YRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW---PVPNRPMFFYVQMGQEEIS 680
YRMHP +S+FPS FY L +G + + PW P+ + F V+ G E+ S
Sbjct: 1455 YRMHPEISQFPSCQFYNSRLLDGDNVATKTLQ----PWHKNPLFGQYRVFDVR-GTEKQS 1509
Query: 681 ASGTSYLNRTEAANVEKI---VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQ 737
+ + Y N EA +V + +T+ + S+IG++TPY Q + SR +
Sbjct: 1510 KTFSLY-NPEEAKSVTDLFDLMTSSFPTVDFASKIGIVTPYRSQLKELRRAFSRKYG--R 1566
Query: 738 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 797
+ ++ ++D FQG+EKD IILSCVRS IGFL D RRLNVALTRAR + I+GN
Sbjct: 1567 AFASKFDMNTIDGFQGQEKDIIILSCVRSETGGSIGFLRDFRRLNVALTRARSSLFIVGN 1626
Query: 798 PKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQ------FQKPKK 840
+ L LW LL + KE ++ L+ K+ V+ F+K K+
Sbjct: 1627 VETLFSDDLWGSLLANAKERGLILYSLLSENKRKAVEATVDAAFEKRKR 1675
>gi|407927432|gb|EKG20325.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 686
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 241/482 (50%), Gaps = 68/482 (14%)
Query: 379 LPRRFGAPGL-------PELNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMA 430
LP + GL P LN SQ A++ ++ R ++LI GPPGTGKT T ++ +
Sbjct: 188 LPSNYSEVGLDKLQWIDPSLNDSQKDAIRFAMASREVALIHGPPGTGKTHTLIELILQLL 247
Query: 431 KQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLT 480
KQ ++LVC PSN++VD + E+++ + ++RL +R + ++ +
Sbjct: 248 KQDL-RLLVCGPSNISVDNIVERLAPHKVPIIRLGHPARLLPSVINHSLDVLTRTSDAAA 306
Query: 481 LHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCT 538
+ +R ++++ + K + ++ + S E K Y+ +R ++ + + V+ T
Sbjct: 307 IVQDIRKEMDAKQASIKKTRNGRERKAIYSEMRELRKDYRERERRCVDQLVKGSKVVLAT 366
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVI------ 592
GAG L + +F V+IDE++QA E +C +PL L AK+VVL GDH QL P I
Sbjct: 367 LHGAGGYHLKDQQFDVVIIDEASQALEAQCWVPL-LSAKKVVLAGDHLQLPPTIKSLNSK 425
Query: 593 ------MCKKAAR------AGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSF 638
KAA+ L Q+LF+RL+ L I+ L QYRMH + FPS
Sbjct: 426 TQKESETSDKAAQKERGKSVTLEQTLFDRLLALHGPSIKRMLTTQYRMHEKIMAFPSQEL 485
Query: 639 YEGTLQNGVTINERQSSGIDFPWPV-----PNRPMFFYVQMG-------QEEISASGTSY 686
YE L ++ R + D P+ V P+ F+ G ++E + +S
Sbjct: 486 YESKLVAAESVKARLLA--DLPYEVQETEDTREPVVFWDTQGGDFPEKSEDEDTGKKSSL 543
Query: 687 L-----NRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK 741
L N EAA V V + +GV I V+TPY Q A + L ++ +
Sbjct: 544 LGDSKSNEMEAALVRLHVGKLVEAGVRAEDIAVVTPYNAQLAVL-------SQLLKEQFA 596
Query: 742 EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
IE+ SVD FQGREK+ +++S VRSN +GFL + RRLNVA+TR + + ++G+ + +
Sbjct: 597 GIELGSVDGFQGREKEAVVVSLVRSNAEHEVGFLGEKRRLNVAMTRPKRHLCVIGDSETV 656
Query: 802 SK 803
+
Sbjct: 657 GR 658
>gi|431910166|gb|ELK13239.1| DNA-binding protein SMUBP-2 [Pteropus alecto]
Length = 984
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 225/454 (49%), Gaps = 39/454 (8%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ASQ AV L Q+ +++I GPPGTGKT T I+ KQG +VL CAPSN AVD
Sbjct: 189 LDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIIVQAVKQG-CKVLCCAPSNTAVDN 247
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR----------HLDTSEKSELHKL 499
L E+++ GL+V+RL +R + S +H R D + +K
Sbjct: 248 LLERLARCGLRVLRLGHPAR-LLGSVQQHCLDEVLARGDSAPIIADIRRDIYQALVKNKK 306
Query: 500 QQLKDEQGELSSSDEKKYKALKRATEREISQS---ADVICCTCVGAGD----PRLANFRF 552
Q K E+ +L + + K L+ E + QS AD + T GA D L + F
Sbjct: 307 TQDKRERSDLRNEVKLLRKELREREEAAMLQSLTAADAVLATNTGASDDGPLKLLPDSYF 366
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV- 611
V+IDE +QA E C IPL L A++ +L GDH QL P + KAA AGL+ SL ERL
Sbjct: 367 DMVVIDECSQALEASCWIPL-LKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAE 425
Query: 612 LLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR---- 666
G +R L VQYRMH ++ ++ S + Y G L ++ D P
Sbjct: 426 AYGAGTVRTLTVQYRMHQAIMQWASEALYHGQLTAHPSVAGHLLR--DLPGVAATEETGI 483
Query: 667 PMFFYVQMGQEEISASGTSYLNRTEAANVEKI---VTTFLRSGVVPSQIGVITPYEGQRA 723
P+ G + G ++ V + V + +GV S I VI+PY Q
Sbjct: 484 PLLLVDTAGCGLLEQEGDGDQSKGNPGEVRLVGLHVQALVDAGVRASDIAVISPYNLQVD 543
Query: 724 YIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNV 783
+ +S + E+E+ SVD FQGREK+ ++LS VRSN +GFL + RR+NV
Sbjct: 544 LLRQSLSHK-------HPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINV 596
Query: 784 ALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
A+TRAR + ++ + + +S L+ ++ EH
Sbjct: 597 AVTRARRHVALVCDSRTVSNHAFLQTLVAYFTEH 630
>gi|159122655|gb|EDP47776.1| tRNA-splicing endonuclease, putative [Aspergillus fumigatus A1163]
Length = 2076
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 252/537 (46%), Gaps = 108/537 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQG-------------- 435
+N +Q A+KS L +LIQGPPG+GKT T A+V + G
Sbjct: 1293 VNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSNVLGDQGVTISRPTGVTN 1352
Query: 436 -----------QVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSP 475
++LVCAPSN AVD+L + L V+RL +A+++
Sbjct: 1353 PRVPGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRHEKLNVIRLGRS--DAINTN 1410
Query: 476 VEHLTL------------------------HYQVRHLDTSEKSELHKLQQ---------- 501
V +TL + + + DT+ K K+ Q
Sbjct: 1411 VLDVTLDELVNARLSQNPRKDSGERDLQTIYMEHKAADTAFKETRAKIDQCRAQGLPVPE 1470
Query: 502 --------LKDEQGELS----SSDEKKYKALK------RATEREISQSADVICCTCVGAG 543
LK ++ +LS ++ +K + A + R ++EI +A VIC T G+G
Sbjct: 1471 ELEREFDLLKKKKTQLSQEIDTARDKNHSAARDADLNRRRIQQEIINNAHVICATLSGSG 1530
Query: 544 DPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1531 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1590
Query: 602 LAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
QSLF R+ K + L QYRMHP +S +PS +FY+G L++G + + ++ P
Sbjct: 1591 YEQSLFVRMQANHPKDVHLLDTQYRMHPEISVYPSAAFYDGKLKDGPNMAKLRAR----P 1646
Query: 661 WPVPNR--PMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGV 714
W P F+ G + + G S +N R E+++T F R +IG+
Sbjct: 1647 WHQSELLGPYRFFDVQGLHQNTTKGHSLINLAELRVAMQLYERLITDF-REYDFSGKIGI 1705
Query: 715 ITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+GQ R + +R G ++ ++ + D+FQGRE + II SCVR++ ++GIG
Sbjct: 1706 ITPYKGQLRELKTQFAARYG---NAIFNMVDFNTTDAFQGRESEVIIFSCVRAS-NKGIG 1761
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
FL D RR+NV LTRA+ + +LGN + L + WNGL+ + +G + + Q
Sbjct: 1762 FLADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLIKDARRRNVYTDGDILGILQ 1818
>gi|451855806|gb|EMD69097.1| hypothetical protein COCSADRAFT_206223 [Cochliobolus sativus ND90Pr]
Length = 1974
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 253/543 (46%), Gaps = 101/543 (18%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIV-------------------YHMA 430
+N +Q A+KS + +LIQGPPG+GKT T AIV +
Sbjct: 1271 VNTAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAILSDSLRNRGTTISVPGQQRS 1330
Query: 431 KQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLT 480
+ ++LVCAPSN AVD+L + G+K L +SR +A+ + V+ +T
Sbjct: 1331 EAASKKLLVCAPSNAAVDELVMRFK-DGIKT--LNGESRKVNIVRLGRGDAIKASVQDVT 1387
Query: 481 LHYQVRHL------DTSEKSELHKL--------QQLK---------DEQGELSSSDEKKY 517
L V D+ +K KL QLK + +G+ ++ E+
Sbjct: 1388 LEELVNQRLGVDPSDSKDKEATQKLFQDHKKISDQLKQAYQQRDSGEVKGDAAAKLEEDI 1447
Query: 518 KALKRAT-------------EREISQSAD---------------VICCTCVGAGDPRLA- 548
AL+R E+ S++AD VIC T G+G
Sbjct: 1448 NALRRQKTALGTKIDNVKDDEKLASRNADLNRRRAQEAVLNEAHVICATLSGSGHEMFQG 1507
Query: 549 -NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
+ F V++DE+ Q E LIPL G + +LVGD QL P + K+AAR QSLF
Sbjct: 1508 LSIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSKEAARFQYEQSLF 1567
Query: 608 ERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVP 664
R+ + L QYRMHP +S FPS +FY+ L +G + + PW +
Sbjct: 1568 VRMQKNHPNDVHLLDTQYRMHPEISLFPSQTFYDSRLLDGGDMAGLRKQ----PWHQSMV 1623
Query: 665 NRPMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVITPYEGQ 721
P F+ GQ+ + G S +N E A + K +T+ ++G+ITPY+ Q
Sbjct: 1624 LGPYRFFDVKGQQAAAPKGHSLINVAEIKVAMQLYKRLTSDYPDYDFKGKVGIITPYKSQ 1683
Query: 722 -RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
R ++M G Q + ++I+ + D+FQGRE + II SCVR++ GIGFL D RR
Sbjct: 1684 LRELKQSFMQVYG---QSIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQDIRR 1740
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPL-NNLKQSMVQFQKPK 839
+NV LTRA+ + +LGN + L + WN L+ + KE +G + L Q +F PK
Sbjct: 1741 MNVGLTRAKSSLWVLGNSESLQRGQYWNKLIVNAKERNRFTDGDVPKMLNQHSSKFPAPK 1800
Query: 840 KIY 842
+ Y
Sbjct: 1801 EGY 1803
>gi|70984729|ref|XP_747871.1| tRNA-splicing endonuclease [Aspergillus fumigatus Af293]
gi|66845498|gb|EAL85833.1| tRNA-splicing endonuclease, putative [Aspergillus fumigatus Af293]
Length = 2076
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 251/537 (46%), Gaps = 108/537 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQG-------------- 435
+N +Q A+KS L +LIQGPPG+GKT T A+V + G
Sbjct: 1293 VNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSNVLGDQGVTISRPTGVTN 1352
Query: 436 -----------QVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSP 475
++LVCAPSN AVD+L + L V+RL +A+++
Sbjct: 1353 PRVPGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRHEKLNVIRLGRS--DAINTN 1410
Query: 476 VEHLTLHYQV------------------------RHLDTSEKSELHKLQQ---------- 501
V +TL V + DT+ K K+ Q
Sbjct: 1411 VLDVTLDELVNARLSQNPRKDSGERDLQTIYMEHKAADTAFKETRAKIDQCRAQGLPVPE 1470
Query: 502 --------LKDEQGELS----SSDEKKYKALK------RATEREISQSADVICCTCVGAG 543
LK ++ +LS ++ +K + A + R ++EI +A VIC T G+G
Sbjct: 1471 ELEREFDLLKKKKTQLSQEIDTARDKNHSAARDADLNRRRIQQEIINNAHVICATLSGSG 1530
Query: 544 DPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1531 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1590
Query: 602 LAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
QSLF R+ K + L QYRMHP +S +PS +FY+G L++G + + ++ P
Sbjct: 1591 YEQSLFVRMQANHPKDVHLLDTQYRMHPEISVYPSAAFYDGKLKDGPNMAKLRAR----P 1646
Query: 661 WPVPNR--PMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGV 714
W P F+ G + + G S +N R E+++T F R +IG+
Sbjct: 1647 WHQSELLGPYRFFDVQGLHQNTTKGHSLINLAELRVAMQLYERLITDF-REYDFSGKIGI 1705
Query: 715 ITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+GQ R + +R G ++ ++ + D+FQGRE + II SCVR++ ++GIG
Sbjct: 1706 ITPYKGQLRELKTQFAARYG---NAIFNMVDFNTTDAFQGRESEVIIFSCVRAS-NKGIG 1761
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
FL D RR+NV LTRA+ + +LGN + L + WNGL+ + +G + + Q
Sbjct: 1762 FLADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLIKDARRRNVYTDGDILGILQ 1818
>gi|212526278|ref|XP_002143296.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210072694|gb|EEA26781.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 713
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 238/487 (48%), Gaps = 67/487 (13%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L + I+LI GPPGTGKT T ++ M ++ ++LVC PSNV+V
Sbjct: 230 PTLNDSQKEAIRFALASKEIALIHGPPGTGKTHTLIELILQMTRRDM-RILVCGPSNVSV 288
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + +VR+ +R E ++ E + VR +++ +
Sbjct: 289 DNIVERLTPHKVPIVRVGHPARLLPSVLDHSLEVLTQTSEAAEIVRDVRKEIDEKQASIR 348
Query: 498 KLQQLKDEQ---GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + G+L K+++ + + + V+ T GAG +L N +F
Sbjct: 349 KTRNGRERREIYGDLKEL-RKEFRERESKCVENLVTGSKVVLATLHGAGGHQLKNQKFDV 407
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC-----------------KKA 597
V+IDE++QA E +C IPL L A + VL GDH QL P I K +
Sbjct: 408 VIIDEASQALEAQCWIPL-LTASRAVLAGDHLQLPPTIKSTNIDAKKISKSKAKEAEKDS 466
Query: 598 ARA----GLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE 651
+ + L +++F+RL+ L I+ L QYRMH + +FPSN YEG L ++
Sbjct: 467 SESLKGVSLEKTMFDRLLALHGPSIKRMLTTQYRMHEKIMQFPSNELYEGKLIAADSVKG 526
Query: 652 RQSSGIDFPWPVP-----NRPMFFYVQMGQ--------EEISASG----TSYLNRTEAAN 694
R D P+ V P+ F G E+ + G S N EA
Sbjct: 527 RLLK--DLPYGVEETDDTKEPLVFIDTQGDDFPEKAEDEDTAVKGGPISESKSNEMEARI 584
Query: 695 VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGR 754
+ V + +GV P I V+TPY Q A I + ++ Y IE+ SVD FQGR
Sbjct: 585 AIRHVEGLIDAGVRPEDIAVVTPYNAQVALIAQSL-------KEKYPGIEIGSVDGFQGR 637
Query: 755 EKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTH 813
EK+ I++S VRSNE +GFL + RRLNVA+TR + + + G+ + +SK ++
Sbjct: 638 EKEAIVVSLVRSNEKHEVGFLGEKRRLNVAMTRPKRHLCVCGDSETISKGSKFLKNWMSF 697
Query: 814 YKEHECL 820
+EH L
Sbjct: 698 LEEHADL 704
>gi|256810316|ref|YP_003127685.1| DNA helicase [Methanocaldococcus fervens AG86]
gi|256793516|gb|ACV24185.1| DNA helicase [Methanocaldococcus fervens AG86]
Length = 655
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 269/553 (48%), Gaps = 94/553 (16%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPE 390
+D +F RM+ A++ FA ++ YI +LG E + +R + F
Sbjct: 122 IDLYVNDITFKRMKEALREFARKRDKLA-YI---ILGIEHPEKPLREDIELEFYDK---H 174
Query: 391 LNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AVK +VL + + LI GPPGTGKT T ++ + + +VL A SN+A D
Sbjct: 175 LNESQKLAVKKAVLSKDLYLIHGPPGTGKTRTLTEVIVQEVRFNKHKVLATADSNIAADN 234
Query: 450 LAEKISAT--GLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEK--SELHKLQQLKDE 505
+ E + LKVVR+ +R +S + +L Y + + + ++ S K++++K++
Sbjct: 235 ILEYLIKKYPDLKVVRVGHPTR--ISKDLIQHSLPYLIENHEKYQEILSLKEKIKEIKEQ 292
Query: 506 QGELSS---------SDEKKYKALKR---------------------------------- 522
+ + SDE+ K KR
Sbjct: 293 RDKFLKPSPRWRRGMSDEQILKVAKRRKDYRGVPKEKIISMAEWIVRNKKIKKIINSLDE 352
Query: 523 ATER---EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV 579
TE+ EI ADVI T AG L + F V+IDE +QA EP CLIP+V G K++
Sbjct: 353 ITEKIMNEILSEADVIVATNSMAGSEILKGWEFDVVVIDEGSQAMEPSCLIPIVKG-KKL 411
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSNS 637
++ GDH QL P ++ + L ++LFERL+ I L++QYRM+ + EFP+
Sbjct: 412 IMAGDHKQLPPTVLSENEE---LKKTLFERLIKKYPEFSSI-LEIQYRMNEKIMEFPNRM 467
Query: 638 FYEG-----------TLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
FY+ TL + V E S D +P FF+V+ G E SY
Sbjct: 468 FYDNKLKADESVKNITLLDLVKEEEIDESDRDIVNEIP--VQFFHVE-GVERKDKESPSY 524
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EA V ++V ++ +P+ VITPY+ Q V Y+ R L ++ ++EV
Sbjct: 525 YNIEEAEKVLEVVKKLIKYK-IPT--NVITPYDAQ----VRYLRR---LFEEQNIDVEVN 574
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD FQGRE + I++S VR+ + GFL D RRLNVA+TRA+ ++++GN +L + +
Sbjct: 575 TVDGFQGRENEAIVISFVRT---KNFGFLKDLRRLNVAITRAKRKLILIGNENLLKQDKV 631
Query: 807 WNGLLTHYKEHEC 819
+N ++ K E
Sbjct: 632 YNEMIKWAKSFES 644
>gi|224124044|ref|XP_002319231.1| predicted protein [Populus trichocarpa]
gi|222857607|gb|EEE95154.1| predicted protein [Populus trichocarpa]
Length = 788
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 229/446 (51%), Gaps = 48/446 (10%)
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 463
+RP +IQGPPGTGK+ ++ +G+ +VLV AP+N AVD + EK+S GL +VR
Sbjct: 329 KRPFLIIQGPPGTGKSGLLKELIALAVGKGE-RVLVTAPTNAAVDNMVEKLSNIGLNIVR 387
Query: 464 LCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ---------LKDEQ-----GEL 509
+ +R +SS V +L V + ++E + + LKD+ +L
Sbjct: 388 VGNPAR--ISSAVASKSLGDIVNSKLAAFRTEFERKKSDLRKDLSHCLKDDSLAAGIRQL 445
Query: 510 SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDESTQATEPEC 568
K K ++ T RE+ SA V+ T GA DP + F V++DE+ QA EP C
Sbjct: 446 LKQLGKTLKKKEKETVREVLSSAQVVLATNTGAADPLIRRLDAFDLVVMDEAGQAIEPSC 505
Query: 569 LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRM 626
IP++ G K+ +L GD CQL PVI+ +KA GL SL ER L G+ +L QYRM
Sbjct: 506 WIPILQG-KRCILAGDQCQLAPVILSRKALEGGLGVSLLERASTLHEGVLATKLTTQYRM 564
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP--VPNRPMFFY--------VQMGQ 676
+ +++ + S Y G L++ T+ F P + P+ + +G
Sbjct: 565 NDAIASWASKEMYSGLLKSSSTVASHLLVDTPFVKPTWITQCPLLLLDTRMPYGSLSVGC 624
Query: 677 EE-ISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGA 734
EE + +GT S+ N EA V + V++ + SGV P+ I V +PY Q
Sbjct: 625 EEHLDPAGTGSFYNEGEADIVVQHVSSLIFSGVRPTAIAVQSPYVAQVQL---------- 674
Query: 735 LRQQLYK-----EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 789
LR++L + +E+A++DSFQGRE D +I+S VRSN +GFL D +R NVA+TRAR
Sbjct: 675 LRERLDELPEADGVEIATIDSFQGREADAVIISMVRSNTLGAVGFLGDSKRTNVAITRAR 734
Query: 790 YGIVILGNPKVLSKQPLWNGLLTHYK 815
+ ++ + + LL H +
Sbjct: 735 KHVAVVCDSSTICHNTFLARLLRHIR 760
>gi|247494016|ref|NP_932114.2| uncharacterized protein C4orf21 homolog [Mus musculus]
Length = 1863
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 232/435 (53%), Gaps = 44/435 (10%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + + +VLV + +NVAVD++
Sbjct: 1409 PITVIHGVFGAGKSYLLAVVILFLVELFEKCDSGTVGNARPWKVLVSSSTNVAVDRVLLG 1468
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHY-------QVRHLDTSEKSELHKLQQLKDE 505
+ + G K +R+ S ++ PV +LH Q++ L+ K EL ++++
Sbjct: 1469 LLSLGFEKFIRV--GSVRKIAKPVLPYSLHAGSDNESEQLKELNALLKEELTPIERVYVR 1526
Query: 506 QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATE 565
K + K T R + + V+ TC P L + +F V++DE +Q TE
Sbjct: 1527 ---------KSIEQHKLGTNRVLLKQVRVVGVTCAACAFPCLNDLKFPVVVLDECSQMTE 1577
Query: 566 PECLIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQ 623
P L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KP+ L+ Q
Sbjct: 1578 PASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPVLLRTQ 1637
Query: 624 YRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASG 683
YR HP++S ++ FYEG+L NG I+ER+ S + W +P + FY G E++
Sbjct: 1638 YRCHPAISAIANDLFYEGSLVNG--ISERERSPV-LEW-LPT--LCFYNVTGAEQVEREN 1691
Query: 684 TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S++N EA K++ + + SGV IGVIT Y+ Q I N +S + K +
Sbjct: 1692 -SFVNVAEATFTLKLIQSLMASGVESCMIGVITLYKSQMYKICNLLSAVDVGHPDV-KAV 1749
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+V++VD+FQG EK+ ILSCVR+ + +GF++ +R+NVALTR R ++I+G+ L K
Sbjct: 1750 QVSTVDAFQGAEKEITILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGSLSCLRK 1806
Query: 804 QPLWNGLLTHYKEHE 818
LW ++ H + E
Sbjct: 1807 NRLWGRVIQHCEGRE 1821
>gi|338210831|ref|YP_004654880.1| type III restriction protein res subunit [Runella slithyformis DSM
19594]
gi|336304646|gb|AEI47748.1| type III restriction protein res subunit [Runella slithyformis DSM
19594]
Length = 636
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 266/532 (50%), Gaps = 78/532 (14%)
Query: 329 FSVDFVWKSTSFDRMQGAMK-TFAVDETSV---SGYIYHHLLGHEVEVQMVRNTLPRRFG 384
+D ++ S++ MQ A+K AV E S + + L G + + T +
Sbjct: 122 LGIDVLFDDNSYEEMQSALKQAMAVLEKSTNEPATRLAAILTGEK------KPTFKEQAP 175
Query: 385 APGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 443
P LN SQ AV S+L+ ++++ GPPGTGKT T + + K +VLV APS
Sbjct: 176 FYSTPSLNPSQQSAVDSILRANELAVVHGPPGTGKTTTLVQAIKALVKTENQKVLVVAPS 235
Query: 444 NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLK 503
N AVD L+EK+ GL V+R+ +R V+ + LTL ++ +E + + ++LK
Sbjct: 236 NTAVDLLSEKLHEEGLNVLRVGNPAR--VTERLTALTLDSKM-----AEHPYMKEAKRLK 288
Query: 504 DEQGEL-------------SSSDEKK------YKALKRA--TEREISQS----ADVICCT 538
+ EL S D++K ++ +K TE+ I A V+ T
Sbjct: 289 KQAQELKAMAHKYKRSFGKSERDQRKLLFVEAHRIMKEVGNTEQYIIDDLLVKAQVVTAT 348
Query: 539 CVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
VG+ + R+ V+IDE+ QA EP C IP VL A++V+L GDHCQL P I + AA
Sbjct: 349 LVGSNHYTVREVRYHTVVIDEAGQALEPACWIP-VLKAQKVILAGDHCQLSPTIKSEVAA 407
Query: 599 RAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
+ GL+ +L E+ V + + L + QYRM+ + + S FY+ L+ ++ R +
Sbjct: 408 KGGLSTTLLEKCVDAHPEAVTLLEEQYRMNEQIMGYSSQIFYQHKLKAHASVAHR----V 463
Query: 658 DFPWPVPNRPMFFYVQMG---QEEISASGTSYLNRTEAA-------------NVEKIVTT 701
F ++P+ F G +E++ GTS N EAA +K T+
Sbjct: 464 LF---TDDKPVLFIDTAGCGFEEKLE--GTSSTNPEEAALLLKHLGLLTAEWEAQKTDTS 518
Query: 702 FLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
F PS I +I PY+ Q + +S L+ L + V +VDSFQG+E+D + +
Sbjct: 519 F------PS-IAIIAPYKQQIHVLAEQLSHVPELQPYL-AHMAVNTVDSFQGQERDVVYI 570
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
S RSN IGFL D RR+NVA+TRAR +V++G+ L++ P + +++
Sbjct: 571 SMTRSNSEGSIGFLADIRRMNVAMTRARKKLVVVGDSATLAQFPFYADFISY 622
>gi|346325571|gb|EGX95168.1| tRNA-splicing endonuclease, putative [Cordyceps militaris CM01]
Length = 2040
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 198/667 (29%), Positives = 287/667 (43%), Gaps = 133/667 (19%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHM------------------- 429
+LN Q +V + +LIQGPPGTGKT T A+V +
Sbjct: 1303 QLNRGQALSVLGAQENDGFTLIQGPPGTGKTKTIVAMVGALLSGQLAQAPAKGTPVGVPV 1362
Query: 430 ----AKQGQG----QVLVCAPSNVAVDQLAEKIS---------ATGLKVVRLCAKSREAV 472
A Q G ++LVCAPSN AVD+L ++ + V+RL +A+
Sbjct: 1363 RPGVANQPAGSRPKKLLVCAPSNAAVDELVTRLKRGITTISGKTKTINVLRLGRS--DAI 1420
Query: 473 SSPVEHLTLHYQVR-----------------------------------HLDTSEKSE-- 495
S+ V+ +TL VR LD + + E
Sbjct: 1421 SAAVKDVTLDELVRVRMQGDSSKDKAKAIREKLHERASEIKEQLGILRPRLDEANEKEDQ 1480
Query: 496 ------LHKLQQLKDEQGELSSSDE----------KKYKALKRATEREISQSADVICCTC 539
L + LK EQ ++ E ++ + +R ++EI +A V+C T
Sbjct: 1481 DARNKLLRQFDDLKREQRDIGKQIEADRDSGNSAAREVEMKRRQIQQEILNNAHVLCATL 1540
Query: 540 VGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
G+G N F V+IDE+ Q E LIPL G + +LVGD QL P ++ + A
Sbjct: 1541 SGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSA 1600
Query: 598 ARAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTI-NERQSS 655
AR G QSLF R+ K + L +QYRMHP +S FPS FYEG L++G + RQ
Sbjct: 1601 ARFGYDQSLFVRMQQNHPKSVHLLDMQYRMHPEISLFPSKEFYEGQLRDGQDMAGLRQQ- 1659
Query: 656 GIDFPWPV-----PNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV--- 707
PW P R FF VQ G +E G S +N E ++ F +
Sbjct: 1660 ----PWHKSALLGPYR--FFDVQ-GVQERGHRGQSLVNTRELEVALQMYDRFRKEYSECN 1712
Query: 708 VPSQIGVITPYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS 766
+ +IG+ITPY+ Q + + +R G + + IE + D+FQGRE + II SCVR+
Sbjct: 1713 LVGKIGIITPYKAQLFELRKRFRARYG---EDICDIIEFNTTDAFQGRECEIIIFSCVRA 1769
Query: 767 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLN 826
+ GIGF+ D RR+NV LTRA+ + ILG+ + L + W L+ K + +G +
Sbjct: 1770 SATGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAKSRDRFTQGDIV 1829
Query: 827 NLKQSMVQFQKPKKIYND------RRLFFGAGPGIVPNDISTSNPNADR-----RGSRAR 875
N+ + ++ KP I G P + D T P+A R R S R
Sbjct: 1830 NMFRKPLERAKPGSITASPAPTPVDSPMTGGSPASMATDGDTVMPDAYRPAPLKRSSEER 1889
Query: 876 GYMPPGPPNGTHKPGLHPA----GFPMPRVPLPPFQGGPPSQPYAI--PSRGAVHGPVGA 929
+P P + P A G R P + P ++ A P G + G GA
Sbjct: 1890 TPIPTRPAAARYGPPAIQASTSLGDSKKRALNSPDRMDPVTKRIASDRPRGGGLAGKFGA 1949
Query: 930 VHHVPPP 936
+ P P
Sbjct: 1950 RPNRPLP 1956
>gi|261192749|ref|XP_002622781.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
gi|239589263|gb|EEQ71906.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
Length = 2114
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 197/639 (30%), Positives = 295/639 (46%), Gaps = 133/639 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIV----------YHMAKQGQG---- 435
+N +Q AV+S + +LIQGPPG+GKT T A+V +A+ G
Sbjct: 1292 VNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKIARPGSSVNLK 1351
Query: 436 ---------QVLVCAPSNVAVDQLAEK-----ISATGLK----VVRLCAKSREAVSSPVE 477
++LVCAPSN AVD+L + ++++G K VVRL +A++S V
Sbjct: 1352 PATRTTNSKKLLVCAPSNAAVDELVMRFKEGVVTSSGQKQNISVVRLGRS--DAINSNVI 1409
Query: 478 HLTLHYQV--------------RHLDT--SEKSEL--------HKLQQLKDEQGELSSSD 513
+TL V + L T SE E +L Q + + + S
Sbjct: 1410 DVTLDELVNAKLGQNGRKNGNEKDLQTYYSEHKEACTQFNEVRDRLDQCRAKGQGVPSEL 1469
Query: 514 EKKYKALKRA----------------------------TEREISQSADVICCTCVGAGDP 545
E+++ LKR ++EI A VIC T G+G
Sbjct: 1470 EREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIIDGAHVICATLSGSGHE 1529
Query: 546 RLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
+ F V+IDE+ Q+ E LIPL G + VLVGD QL P ++ K A+R
Sbjct: 1530 MFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKVASRFQYE 1589
Query: 604 QSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
QSLF R+ K + L QYRMHP +S FPS +FY+G LQ+G + + + PW
Sbjct: 1590 QSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVR----PWH 1645
Query: 663 VPNR--PMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGVIT 716
P F+ G + G S +N R E+++T + R+ +IG+IT
Sbjct: 1646 KSELLGPYRFFDVQGLHSSAPKGHSLVNVAELRVAMKLYERLITDY-RTYDFTGRIGIIT 1704
Query: 717 PYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+GQ + N + ++ G ++ ++E + D+FQGRE + II SCVR++ ++GIGFL
Sbjct: 1705 PYKGQLREMKNQFANKYG---NSIFTKVEFNTTDAFQGRECEVIIFSCVRAS-NRGIGFL 1760
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 835
D RR+NV LTRA+ + +LGN + L + WNGL+T + +G + +L
Sbjct: 1761 ADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQGDVLHL------L 1814
Query: 836 QKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHPAG 895
QKP +I D+ L G I +S P+ R GS G+ NG+ +P +
Sbjct: 1815 QKP-QISLDKEL--GDVEMIDAPSAKSSTPS--RTGSVTPGW------NGSSRPS---SA 1860
Query: 896 FPMPRVPLPP------FQGGPPSQPYAIPSRGAVHGPVG 928
+ R+ P + P P +PS G GP G
Sbjct: 1861 LSIGRLSSIPDNHPTSSRDTPGHSPKLVPSTGP-EGPSG 1898
>gi|440898219|gb|ELR49762.1| hypothetical protein M91_07236, partial [Bos grunniens mutus]
Length = 1039
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 230/432 (53%), Gaps = 38/432 (8%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + ++L+ + +NVAVD++
Sbjct: 586 PITIIYGVFGAGKSYLLAVVILFFVQLFEKCEALTVGNARPWKLLISSSTNVAVDRVLLG 645
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G K VR+ S ++ PV L Y + +E +L +L L E +L+
Sbjct: 646 LLSLGFEKFVRV--GSVRKIAKPV----LPYSLYAGSENENEQLKELHALMKE--DLTPV 697
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T + + + V+ TC P + + +F V++DE +Q TEP
Sbjct: 698 ERVYVRKSIEQHKLGTNKTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQMTEPAS 757
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KPI L+ QYR
Sbjct: 758 LLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRC 817
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP++S ++ FYEG L NG++ ER W +P + FY G E+I G S+
Sbjct: 818 HPTISAIANDLFYEGNLMNGISETERSPL---LEW-LPT--LCFYNVKGLEQIE-RGNSF 870
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EAA K++ + + SG+ S IGVIT Y+ Q + + +S L K ++V+
Sbjct: 871 HNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSAMDFDHPNL-KAVQVS 929
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR R ++I+GN L K L
Sbjct: 930 TVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGNLACLRKNRL 986
Query: 807 WNGLLTHYKEHE 818
W ++ H + E
Sbjct: 987 WGRVIQHCEGRE 998
>gi|239610200|gb|EEQ87187.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ER-3]
Length = 2114
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 257/535 (48%), Gaps = 106/535 (19%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIV----------YHMAKQGQG---- 435
+N +Q AV+S + +LIQGPPG+GKT T A+V +A+ G
Sbjct: 1292 VNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKIARPGSSVNLK 1351
Query: 436 ---------QVLVCAPSNVAVDQLAEK-----ISATGLK----VVRLCAKSREAVSSPVE 477
++LVCAPSN AVD+L + ++++G K VVRL +A++S V
Sbjct: 1352 PATRTTNSKKLLVCAPSNAAVDELVMRFKEGVVTSSGQKQNISVVRLGRS--DAINSNVI 1409
Query: 478 HLTLHYQV--------------RHLDT--SEKSEL--------HKLQQLKDEQGELSSSD 513
+TL V + L T SE E +L Q + + + S
Sbjct: 1410 DVTLDELVNAKLGQNGRKNGNEKDLQTYYSEHKEACTQFNEVRDRLDQCRAKGQGVPSEL 1469
Query: 514 EKKYKALKRA----------------------------TEREISQSADVICCTCVGAGDP 545
E+++ LKR ++EI A VIC T G+G
Sbjct: 1470 EREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIIDGAHVICATLSGSGHE 1529
Query: 546 RLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
+ F V+IDE+ Q+ E LIPL G + VLVGD QL P ++ K A+R
Sbjct: 1530 MFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKVASRFQYE 1589
Query: 604 QSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
QSLF R+ K + L QYRMHP +S FPS +FY+G LQ+G + + + PW
Sbjct: 1590 QSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVR----PWH 1645
Query: 663 VPNR--PMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGVIT 716
P F+ G + G S +N R E+++T + R+ +IG+IT
Sbjct: 1646 KSELLGPYRFFDVQGLHSSAPKGHSLVNVAELRVAMKLYERLITDY-RTYDFTGRIGIIT 1704
Query: 717 PYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+GQ + N + ++ G ++ ++E + D+FQGRE + II SCVR++ ++GIGFL
Sbjct: 1705 PYKGQLREMKNQFANKYG---NSIFTKVEFNTTDAFQGRECEVIIFSCVRAS-NRGIGFL 1760
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
D RR+NV LTRA+ + +LGN + L + WNGL+T + +G + +L Q
Sbjct: 1761 ADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQGDVLHLLQ 1815
>gi|297475614|ref|XP_002688121.1| PREDICTED: uncharacterized protein LOC539572 [Bos taurus]
gi|296486778|tpg|DAA28891.1| TPA: prematurely terminated mRNA decay factor-like [Bos taurus]
Length = 2116
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 230/432 (53%), Gaps = 38/432 (8%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + ++L+ + +NVAVD++
Sbjct: 1654 PITIIHGVFGAGKSYLLAVVILFFVQLFEKCEALTVGNARPWKLLISSSTNVAVDRVLLG 1713
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G K VR+ S ++ PV L Y + +E +L +L L E +L+
Sbjct: 1714 LLSLGFEKFVRV--GSVRKIAKPV----LPYSLYAGSENENEQLKELHALMKE--DLTPV 1765
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T + + + V+ TC P + + +F V++DE +Q TEP
Sbjct: 1766 ERVYVRKSIEQHKLGTNKTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQMTEPAS 1825
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KPI L+ QYR
Sbjct: 1826 LLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRC 1885
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP++S ++ FYEG L NG++ ER W +P + FY G E+I G S+
Sbjct: 1886 HPTISAIANDLFYEGNLMNGISETERSPL---LEW-LPT--LCFYNVKGLEQIE-RGNSF 1938
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EAA K++ + + SG+ S IGVIT Y+ Q + + +S L K ++V+
Sbjct: 1939 HNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSAMDFDHPNL-KAVQVS 1997
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR R ++I+GN L K L
Sbjct: 1998 TVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGNLACLRKNRL 2054
Query: 807 WNGLLTHYKEHE 818
W ++ H + E
Sbjct: 2055 WGRVIQHCEGRE 2066
>gi|326474384|gb|EGD98393.1| tRNA-splicing endonuclease [Trichophyton tonsurans CBS 112818]
Length = 2188
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 257/538 (47%), Gaps = 109/538 (20%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMA------------------ 430
+LN +Q A+KS + +LIQGPPG+GKT T AIV +
Sbjct: 1310 DLNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALLTPILAERRVSQPKITSDS 1369
Query: 431 ----KQG-QGQVLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAVSSP 475
K G ++LVCAPSN AVD+L + G+K V+RL +A+++
Sbjct: 1370 AQANKSGPSKKLLVCAPSNAAVDELVMRFKE-GVKTLNGKTQPISVIRL--GRSDAINAN 1426
Query: 476 VEHLTLH-----------------------YQVRHLDTSEK------------------- 493
V +TL Y H +TS K
Sbjct: 1427 VLDVTLDELVNAKLNQSGQTKNGEERDLQSYFNEHKETSAKFIEIRQRIDQCRARVEPVS 1486
Query: 494 SELHK-LQQLKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTCVGA 542
+EL + LK ++ +LS ++ +K + A +R ++EI A VIC T G+
Sbjct: 1487 NELEREFDLLKRKKAQLSQAIDNARDKNHAAARNAELTRRRIQQEIIDGAHVICSTLSGS 1546
Query: 543 GDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G + F V+IDE+ Q+ E LIPL G + VLVGD QL P ++ K+A+R
Sbjct: 1547 GHEMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRF 1606
Query: 601 GLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQSSG 656
QSLF R+ + L QYRMHP +S+FPS +FY+G LQ+G + ++ G
Sbjct: 1607 QYEQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHG 1666
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL---RSGVVPSQIG 713
+ P FF VQ G +A G S +N E ++ L R+ +IG
Sbjct: 1667 SELLGPY----RFFDVQ-GMHSSAAKGHSLINIAELTVAMRLYERLLADYRNYDFAGKIG 1721
Query: 714 VITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGI 772
+ITPY+GQ R + ++ G+ ++ +E + D+FQGRE + II SCVR+++ +GI
Sbjct: 1722 IITPYKGQLRELKSRFAAKYGS---SIFTTVEFNTTDAFQGRECEVIIFSCVRASD-RGI 1777
Query: 773 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
GFL+D RR+NV LTRA+ + +LGN + L + W L+ +E + EG + + Q
Sbjct: 1778 GFLSDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARERQLYTEGDILRILQ 1835
>gi|212225034|ref|YP_002308270.1| DNA helicase [Thermococcus onnurineus NA1]
gi|212009991|gb|ACJ17373.1| DNA helicase [Thermococcus onnurineus NA1]
Length = 660
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 172/496 (34%), Positives = 234/496 (47%), Gaps = 80/496 (16%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LNASQ A+ L P LI GP GTGKT T A ++ ++G +VL A SNVAVD
Sbjct: 171 LNASQRRAISQALGSPNFFLIHGPFGTGKTRTLAELIRQEVERGH-KVLATAESNVAVDN 229
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHY-QVRHLDTSEKSELHKLQQLKDEQGE 508
L E+++ +GLK+VR+ SR VS + TL Y +H SE EL Q E+ +
Sbjct: 230 LVERLAESGLKIVRIGHPSR--VSKHLHETTLAYLMTKHDLYSELRELRVTAQNLAEKRD 287
Query: 509 LSSSDEKKYK-----------------------------------------------ALK 521
+ KY+ L+
Sbjct: 288 TFTKPLPKYRRGLTDIEILALSRRRRGTRGVPAKLIREMANWIKLNKLVQKAFDDARKLE 347
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
REI Q ADV+ T AG + + +IDE+TQAT P LIP + AK+ VL
Sbjct: 348 ERIAREIIQEADVVLTTNASAGLEVIGYADYDVAIIDEATQATIPSVLIP-INRAKRFVL 406
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNSFYE 640
GDH QL P I+ +KA L+++LFE L+ L VQYRM+ L EFP+ FY+
Sbjct: 407 AGDHRQLPPTILSEKARE--LSRTLFEGLIERYPEDSAMLTVQYRMNERLMEFPNREFYD 464
Query: 641 GTLQN--GVTINERQSSGI---DF--PWP--VPNRPMFFYVQMGQ-----EEISASGTSY 686
G ++ GV GI +F PW + + ++ + E S
Sbjct: 465 GKIKAAPGVKCITLTDLGIKCPNFGEPWDEILKAGNVLVFIDTSKHPEKWERQRRGSESR 524
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EA V + V L GV P IGVITPY+ QR I + + +EIEV
Sbjct: 525 ENPLEARIVAETVEKLLEMGVKPEWIGVITPYDDQRDLISSLVP----------EEIEVR 574
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD +QGREK+ IILS VRSNE +GFL D RRLNV+LTRA+ ++++G+ + LS
Sbjct: 575 TVDGYQGREKEVIILSFVRSNERGEVGFLKDLRRLNVSLTRAKRKLIVVGDSETLSVHST 634
Query: 807 WNGLLTHYKEHECLVE 822
+ + K VE
Sbjct: 635 YKRFIEFVKAEGRFVE 650
>gi|392396283|ref|YP_006432884.1| DNA/RNA helicase [Flexibacter litoralis DSM 6794]
gi|390527361|gb|AFM03091.1| DNA/RNA helicase, superfamily I [Flexibacter litoralis DSM 6794]
Length = 661
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 237/472 (50%), Gaps = 62/472 (13%)
Query: 387 GLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 445
L LN SQ AV+++L+ + I++I GPPGTGKT T A + K + Q++VCAPSN
Sbjct: 192 ALNHLNESQKNAVQNILRAQDIAIIHGPPGTGKTTTLVAAIVETLK-NERQIMVCAPSNT 250
Query: 446 AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSE-KSELHKLQQL- 502
AVD L EK++A +KV RL +R VS +EHLTL ++ +H D KS L + +Q+
Sbjct: 251 AVDWLTEKLNAQNVKVTRLGHPAR--VSDTLEHLTLDGKIEKHPDYKYYKSLLKQSEQMR 308
Query: 503 -----------KDEQGE----LSSSDEKKYKALK--RATEREISQSADVICCTCVGAGDP 545
K E+ E L + K ALK + + + + V+ CT G+ +
Sbjct: 309 RKALKFKRNFGKQERSERQHMLRDAKRLKQDALKLEEYISKHVLEHSQVLACTLAGSANY 368
Query: 546 RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQS 605
L + F + IDE+ QA E IP +L A +V++ GDH QL P I +AA++GL +
Sbjct: 369 MLNHRTFSTLFIDEAAQALEGATWIP-ILKANRVIMAGDHQQLPPTIKSFEAAKSGLENT 427
Query: 606 LFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTL------------QNGVTINER 652
LFE+++ + L VQYRM+ + EF + FY G L QN +
Sbjct: 428 LFEKIIKNHPQTANMLSVQYRMNEQIMEFSNQKFYNGNLKAFETNKNHVLYQNLAPVEFV 487
Query: 653 QSSGIDFPW-----------PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTT 701
++G F P + + ++Q+ EEI ++ E N ++ +
Sbjct: 488 DTAGCGFSEMQNEETLSRYNPEEAKLVVSHLQVLFEEILLK----IDNKEIENSKEFIDN 543
Query: 702 FLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
F +GV++ Y+ Q Y++ + R + +I + +VD FQG+E++ + +
Sbjct: 544 F--------SVGVLSTYKAQ-VYLLRDLIRKNEVLSNYSNQITIHTVDGFQGQEREVMYI 594
Query: 762 SCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
S VRSNE IGFL D RR NVA+TRA+ +V+ G+ L + L +
Sbjct: 595 SLVRSNEKGEIGFLKDFRRFNVAITRAKKRLVVFGDSATLGSDEFYKDFLDY 646
>gi|194667596|ref|XP_588126.4| PREDICTED: uncharacterized protein LOC539572 [Bos taurus]
Length = 2116
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 230/432 (53%), Gaps = 38/432 (8%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + ++L+ + +NVAVD++
Sbjct: 1654 PITIIHGVFGAGKSYLLAVVILFFVQLFEKCEALTVGNARPWKLLISSSTNVAVDRVLLG 1713
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G K VR+ S ++ PV L Y + +E +L +L L E +L+
Sbjct: 1714 LLSLGFEKFVRV--GSVRKIAKPV----LPYSLYAGSENENEQLKELHALMKE--DLTPV 1765
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T + + + V+ TC P + + +F V++DE +Q TEP
Sbjct: 1766 ERVYVRKSIEQHKLGTNKTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQMTEPAS 1825
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KPI L+ QYR
Sbjct: 1826 LLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRC 1885
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP++S ++ FYEG L NG++ ER W +P + FY G E+I G S+
Sbjct: 1886 HPTISAIANDLFYEGNLMNGISETERSPL---LEW-LPT--LCFYNVKGLEQIE-RGNSF 1938
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EAA K++ + + SG+ S IGVIT Y+ Q + + +S L K ++V+
Sbjct: 1939 HNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSAMDFDHPNL-KAVQVS 1997
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR R ++I+GN L K L
Sbjct: 1998 TVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGNLACLRKNRL 2054
Query: 807 WNGLLTHYKEHE 818
W ++ H + E
Sbjct: 2055 WGRVIQHCEGRE 2066
>gi|11191231|emb|CAC16347.1| putative helicase [Arabidopsis thaliana]
Length = 635
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 231/451 (51%), Gaps = 36/451 (7%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ K++ + + L+ GPPGTGKT T IV K+G ++L CA SN+AVD
Sbjct: 186 LDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRG-SKILACAASNIAVDN 244
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 502
+ E++ +K+VR+ +R + + S ++ L L + E+ KL +
Sbjct: 245 IVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKALNGKLLKA 304
Query: 503 KDE------QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVL 556
KD+ Q EL + +++ K + A ++ ++ADVI T GA +L N F V+
Sbjct: 305 KDKNTRRLIQKELRTLGKEERKRQQLAVS-DVIKNADVILTTLTGALTRKLDNRTFDLVI 363
Query: 557 IDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLK 616
IDE QA E C I L+ G++ +L GDH QL P I +A R GL ++LFERL L
Sbjct: 364 IDEGAQALEVACWIALLKGSR-CILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLYGD 422
Query: 617 PIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR-----PMF 669
I+ L VQYRMH + + S Y+ N +T + +S + F +
Sbjct: 423 EIKSMLTVQYRMHELIMNWSSKELYD----NKITAHSSVASHMLFDLENVTKSSSTEATL 478
Query: 670 FYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV 726
V EE S N EA + SGV PS IG+ITPY Q +
Sbjct: 479 LLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDIGIITPYAAQVMLL- 537
Query: 727 NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 786
R +++ K++E+++VD FQGREK+ II+S VRSN + +GFL D RR+NVA+T
Sbjct: 538 ----RILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVT 593
Query: 787 RARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R+R I+ + + +S ++ +++EH
Sbjct: 594 RSRRQCCIVCDTETVSSDAFLKRMIEYFEEH 624
>gi|443894317|dbj|GAC71665.1| tRNA-splicing endonuclease positive effector [Pseudozyma antarctica
T-34]
Length = 2923
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 255/534 (47%), Gaps = 118/534 (22%)
Query: 407 ISLIQGPPGTGKTVTSAAIVYHM------------AKQGQGQV------LVCAPSNVAVD 448
SLIQGPPGTGKT T A++ A Q QG+V L+CAPSN A+D
Sbjct: 1487 FSLIQGPPGTGKTKTICALIGAFVSNRKGPSTSVQAGQAQGKVGATKKILLCAPSNAAID 1546
Query: 449 QLAEKISATGL----------KVVRLCAKSREAVSSPVEHLTLHYQVRH-------LDTS 491
++A++ A G+ KVVR+ VS V+ ++L Y + D +
Sbjct: 1547 EVAKRARA-GMRLADGKTFHPKVVRVGRDDSMNVS--VKDISLDYLIDQRLESGGAFDAN 1603
Query: 492 EK----------SELHKLQ-QLKDEQGELSSS---------------------------- 512
+E+H L+ Q + +Q ELS +
Sbjct: 1604 RNKAGADPSALHAEIHSLKMQREQKQAELSEARGSGAQTLVTQLEAEIRNLSAKRLGVMS 1663
Query: 513 --DEKKYK---------ALKRATEREISQSADVICCTCVGAGDPRLAN--FRFRQVLIDE 559
DE K K A +R EI ADVIC T GAG LA F F V+IDE
Sbjct: 1664 KLDEAKDKQQSAHRQREADRRRARMEILGDADVICTTLSGAGHEMLAGVAFDFETVVIDE 1723
Query: 560 STQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR 619
+ QA E +IPL G KQ ++VGD QL P ++ ++A + G +QSLF R+ + +
Sbjct: 1724 AAQAVELSSMIPLRYGCKQCIMVGDPNQLPPTVISQQAEKLGYSQSLFVRMFEKAPQAVH 1783
Query: 620 -LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE--RQSSGIDFPWPV--PNRPMFFYVQM 674
L +QYRMHP +S FPS +FY+ L +G + E RQ PW RP F ++
Sbjct: 1784 LLSIQYRMHPEISVFPSKAFYDSKLLDGPDMAELTRQ------PWHKYELTRP-FKFLST 1836
Query: 675 GQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYI-VNYM 729
E S +NR EA A E++ T R +IG++T Y+ Q + +
Sbjct: 1837 KAPESPGRFHSIINREEANVALALYERLRTDHPREN-FDYRIGIVTMYKAQVFELRRTFQ 1895
Query: 730 SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS-NEHQGIGFLNDPRRLNVALTRA 788
R G Q + + I+ +VD FQG+EKD IILSCVRS +E + IGFL+D RRLNVA+TRA
Sbjct: 1896 QRYG---QDIVERIDFNTVDGFQGQEKDIIILSCVRSASEPRSIGFLSDRRRLNVAVTRA 1952
Query: 789 RYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKI 841
+ + ++GN + L + +W L+ ++ G + + + Q +P ++
Sbjct: 1953 KSNLFVIGNAEHLRRGDAIWESLVATAEQR-----GAVQPITHLISQLHRPHQV 2001
>gi|388853403|emb|CCF53023.1| related to SEN1 protein [Ustilago hordei]
Length = 2314
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 248/511 (48%), Gaps = 114/511 (22%)
Query: 407 ISLIQGPPGTGKTVTSAAIVYHM------------AKQGQGQV------LVCAPSNVAVD 448
SLIQGPPGTGKT T A++ A Q QG+V L+CAPSN A+D
Sbjct: 1517 FSLIQGPPGTGKTKTICALIGAFVSRRKGPSTSVQAGQAQGKVGATKKILLCAPSNAAID 1576
Query: 449 QLAEKISATGL----------KVVRLCAKSREAVSSPVEHLTLHYQVRH-------LDTS 491
++A++ A G+ KVVR+ + E ++ V+ ++L Y + D +
Sbjct: 1577 EVAKRARA-GIRLLDGKVIHPKVVRVGRE--ETINVSVKDISLEYLIEQRLEGGSAFDAN 1633
Query: 492 EKS-----------ELHKLQ-QLKDEQGELSSS--------------------------- 512
S E+HKL+ Q + +Q ELS +
Sbjct: 1634 RNSATAADPSALHAEIHKLKMQREQKQDELSQARGSGDGALATQLEAEIRNLSAKRLGIM 1693
Query: 513 ---DEKKYK---------ALKRATEREISQSADVICCTCVGAGDPRLAN--FRFRQVLID 558
DE K K A +R EI ADVIC T GAG L+ F F V+ID
Sbjct: 1694 SKLDEAKDKQQSQHRQREADRRRARLEILGDADVICTTLSGAGHEMLSGVAFDFETVVID 1753
Query: 559 ESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPI 618
E+ QA E +IPL G KQ ++VGD QL P ++ ++A + G +QSLF R+ + +
Sbjct: 1754 EAAQAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQQADKLGYSQSLFVRMFERAPQAV 1813
Query: 619 R-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE--RQSSGIDFPWPV--PNRPMFFYVQ 673
L +QYRMHP +S FPS +FY+ LQ+G + E RQ PW RP F ++
Sbjct: 1814 HLLSIQYRMHPEISVFPSKAFYDSKLQDGPDMAELTRQ------PWHKYELTRP-FKFLS 1866
Query: 674 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSG----VVPSQIGVITPYEGQRAYIV-NY 728
E S +N+ E ANV + LR+ +IG++T Y+ Q + +
Sbjct: 1867 TKAPESPGRFHSIINKEE-ANVALALYERLRTDNPRENFDYRIGIVTMYKAQVFELKRTF 1925
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS-NEHQGIGFLNDPRRLNVALTR 787
R G Q + + I+ +VD FQG+EKD IILSCVRS + IGFL+D RRLNVA+TR
Sbjct: 1926 QQRYG---QDIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFLSDRRRLNVAVTR 1982
Query: 788 ARYGIVILGNPKVLSK-QPLWNGLLTHYKEH 817
A+ + I+GN + L + +W L+ ++
Sbjct: 1983 AKSNLFIIGNAEHLRRGDAIWESLVAAAEQR 2013
>gi|327355296|gb|EGE84153.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 2179
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 257/535 (48%), Gaps = 106/535 (19%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIV----------YHMAKQGQG---- 435
+N +Q AV+S + +LIQGPPG+GKT T A+V +A+ G
Sbjct: 1292 VNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKIARPGSSVNLK 1351
Query: 436 ---------QVLVCAPSNVAVDQLAEK-----ISATGLK----VVRLCAKSREAVSSPVE 477
++LVCAPSN AVD+L + ++++G K VVRL +A++S V
Sbjct: 1352 PATRTTNSKKLLVCAPSNAAVDELVMRFKEGVVTSSGQKQNISVVRLGRS--DAINSNVI 1409
Query: 478 HLTLHYQV--------------RHLDT--SEKSEL--------HKLQQLKDEQGELSSSD 513
+TL V + L T SE E +L Q + + + S
Sbjct: 1410 DVTLDELVNAKLGQNGRKNGNEKDLQTYYSEHKEACTQFNEVRDRLDQCRAKGQGVPSEL 1469
Query: 514 EKKYKALKRA----------------------------TEREISQSADVICCTCVGAGDP 545
E+++ LKR ++EI A VIC T G+G
Sbjct: 1470 EREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIIDGAHVICATLSGSGHE 1529
Query: 546 RLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
+ F V+IDE+ Q+ E LIPL G + VLVGD QL P ++ K A+R
Sbjct: 1530 MFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKVASRFQYE 1589
Query: 604 QSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
QSLF R+ K + L QYRMHP +S FPS +FY+G LQ+G + + + PW
Sbjct: 1590 QSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVR----PWH 1645
Query: 663 VPNR--PMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGVIT 716
P F+ G + G S +N R E+++T + R+ +IG+IT
Sbjct: 1646 KSELLGPYRFFDVQGLHSSAPKGHSLVNVAELRVAMKLYERLITDY-RTYDFTGRIGIIT 1704
Query: 717 PYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+GQ + N + ++ G ++ ++E + D+FQGRE + II SCVR++ ++GIGFL
Sbjct: 1705 PYKGQLREMKNQFANKYG---NSIFTKVEFNTTDAFQGRECEVIIFSCVRAS-NRGIGFL 1760
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
D RR+NV LTRA+ + +LGN + L + WNGL+T + +G + +L Q
Sbjct: 1761 ADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQGDVLHLLQ 1815
>gi|426232114|ref|XP_004010079.1| PREDICTED: uncharacterized protein LOC101118531 [Ovis aries]
Length = 2104
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 229/432 (53%), Gaps = 38/432 (8%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + ++L+ + +NVAVD++
Sbjct: 1642 PITIIHGVFGAGKSYLLAVVILFFVQLFEKCEALTVGNARPWKLLISSSTNVAVDRVLLG 1701
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G K VR+ S ++ PV L Y + +E +L +L L E +L+
Sbjct: 1702 LLSLGFEKFVRV--GSVRKIAKPV----LPYSLYAGSENENEQLKELHALMKE--DLTPV 1753
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T + + + V+ TC P + + +F V++DE +Q TEP
Sbjct: 1754 ERVYVRKSIEQHKLGTNKTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPAS 1813
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KPI L+ QYR
Sbjct: 1814 LLPIARFECEKLILVGDPQQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRC 1873
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP++S ++ FYEG L NG++ ER W +P + FY G E+I G S+
Sbjct: 1874 HPTISAIANDLFYEGNLMNGISETERSPL---LEW-LPT--LCFYNVKGLEQIE-RGNSF 1926
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EAA K++ + + SG+ S IGVIT Y+ Q + + +S K ++V+
Sbjct: 1927 HNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSA-ADFDHPNVKAVQVS 1985
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR R ++I+GN L K L
Sbjct: 1986 TVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGNLACLRKNRL 2042
Query: 807 WNGLLTHYKEHE 818
W ++ H + E
Sbjct: 2043 WGRVIQHCEGRE 2054
>gi|240102675|ref|YP_002958984.1| UvrD type DNA helicase [Thermococcus gammatolerans EJ3]
gi|239910229|gb|ACS33120.1| DNA helicase, putative [Thermococcus gammatolerans EJ3]
Length = 660
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 243/498 (48%), Gaps = 86/498 (17%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LNASQ A+ L P LI GP GTGKT T ++ +G +VL A SNVAVD
Sbjct: 175 LNASQRRAIARALGSPDFFLIHGPFGTGKTRTLVELIRQEVARGH-RVLATAESNVAVDN 233
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHY---------QVRHL-----------D 489
+ E++ +GLKVVR+ SR VS + TL Y ++R L D
Sbjct: 234 IVERLVDSGLKVVRVGHPSR--VSKALHETTLAYLMTQHELYGELRELRVIGENLKEKRD 291
Query: 490 TSEK-----------SELHKL-------------------QQLK-DEQGELSSSDEKKYK 518
T K ++ +L Q LK +EQ + + D +K
Sbjct: 292 TFTKPAPKYRRGLTDKQILRLAERGIGTRGVPARLIREMAQWLKINEQVQKTFDDARK-- 349
Query: 519 ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
L+ REI + A+V+ T AG + + +IDE+TQAT P LIP + A++
Sbjct: 350 -LEERIAREIIREANVVLTTNSSAGLEVVDYGSYDVAIIDEATQATIPSVLIP-INRARR 407
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNS 637
VL GDH QL P I+ ++A L+++LFE L+ K L VQYRM+ L EFPS
Sbjct: 408 FVLAGDHKQLPPTILSERAKE--LSKTLFEGLIERYPWKSEMLTVQYRMNERLMEFPSRE 465
Query: 638 FYEGTLQNGVTINERQSS--GIDFP-----WPVPNRP--MFFYVQMGQEEISASGTSY-- 686
FY G ++ ++ + G++ P W +P + +V + E Y
Sbjct: 466 FYNGRIKADESVRNITLADLGVELPKGDDVWAEVLKPENVLVFVDTAKREDRFERQRYGS 525
Query: 687 ---LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
N EA VE+ V L+ G+ P +GVITPY+ QR I + + +EI
Sbjct: 526 ESRENPLEARLVEEAVEGLLKLGIKPEWVGVITPYDDQRDLISSLLP----------EEI 575
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
EV +VD +QGREK+ I+LS VRSN +GFL D RRLNV+LTRA+ ++++G+ LS
Sbjct: 576 EVKTVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSS 635
Query: 804 QPLWNGLLTHYKEHECLV 821
P + L+ ++ E V
Sbjct: 636 HPTYKRLVEFVRKRETYV 653
>gi|225454589|ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
Length = 953
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 237/454 (52%), Gaps = 64/454 (14%)
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 463
+RPI +IQGPPGTGKTV ++ +QG+ +VLV AP+N AVD + EK+S G+ +VR
Sbjct: 494 KRPILIIQGPPGTGKTVLLKELIALAVQQGE-RVLVTAPTNAAVDNMVEKLSNIGVNIVR 552
Query: 464 LCAKSR-----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ--LKDEQGELS 510
+ +R E V+S +E+ ++ +KS+L K + LKD+ L+
Sbjct: 553 VGNPARISSAVASKSLGEIVNSKLENFLTEFE------RKKSDLRKDLRHCLKDD--SLA 604
Query: 511 SSDEKKYKALKRATEREIS-------QSADVICCTCVGAGDPRLANFR-FRQVLIDESTQ 562
+ + K L +A +++ SA V+ T GA DP + F V+IDE+ Q
Sbjct: 605 AGIRQLLKQLGKALKKKEKETVKEVLSSAQVVLATNTGAADPVIRRLDAFDLVIIDEAGQ 664
Query: 563 ATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRL 620
A EP C IP++ G K+ ++ GD CQL PVI+ +KA GL SL ER L + +L
Sbjct: 665 AIEPSCWIPILQG-KRCIIAGDQCQLAPVILSRKALEGGLGVSLLERAATLHEEVLATKL 723
Query: 621 QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP------------NRPM 668
QYRM+ +++ + S Y G+L++ ++ +D P+ P R
Sbjct: 724 TTQYRMNDAIASWASKEMYGGSLKSSSSVFSHLL--VDSPFVKPAWITQCPLLLLDTRMP 781
Query: 669 FFYVQMGQEE-ISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV 726
+ + +G EE + +GT S+ N EA V + V + + +GV P+ I V +PY Q
Sbjct: 782 YGSLSVGCEEHLDPAGTGSFYNEGEADIVVQHVLSLISAGVSPTAIAVQSPYVAQVQL-- 839
Query: 727 NYMSRNGALRQQLYK-----EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
LR +L + +EVA++DSFQGRE D +I+S VRSN +GFL D RR+
Sbjct: 840 --------LRDRLDEIPEAVGVEVATIDSFQGREADAVIISMVRSNTLGAVGFLGDSRRM 891
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
NVA+TRAR + ++ + + LL H +
Sbjct: 892 NVAITRARKHVAVVCDSSTICHNTFLARLLRHIR 925
>gi|18395518|ref|NP_565299.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|15027927|gb|AAK76494.1| putative helicase [Arabidopsis thaliana]
gi|20197343|gb|AAM15033.1| putative helicase [Arabidopsis thaliana]
gi|20197741|gb|AAD17447.2| putative helicase [Arabidopsis thaliana]
gi|20259169|gb|AAM14300.1| putative helicase [Arabidopsis thaliana]
gi|330250587|gb|AEC05681.1| putative DNA-binding protein [Arabidopsis thaliana]
Length = 639
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 231/451 (51%), Gaps = 36/451 (7%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ K++ + + L+ GPPGTGKT T IV K+G ++L CA SN+AVD
Sbjct: 190 LDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRG-SKILACAASNIAVDN 248
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 502
+ E++ +K+VR+ +R + + S ++ L L + E+ KL +
Sbjct: 249 IVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKALNGKLLKA 308
Query: 503 KDE------QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVL 556
KD+ Q EL + +++ K + A ++ ++ADVI T GA +L N F V+
Sbjct: 309 KDKNTRRLIQKELRTLGKEERKRQQLAVS-DVIKNADVILTTLTGALTRKLDNRTFDLVI 367
Query: 557 IDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLK 616
IDE QA E C I L+ G++ +L GDH QL P I +A R GL ++LFERL L
Sbjct: 368 IDEGAQALEVACWIALLKGSR-CILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLYGD 426
Query: 617 PIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR-----PMF 669
I+ L VQYRMH + + S Y+ N +T + +S + F +
Sbjct: 427 EIKSMLTVQYRMHELIMNWSSKELYD----NKITAHSSVASHMLFDLENVTKSSSTEATL 482
Query: 670 FYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV 726
V EE S N EA + SGV PS IG+ITPY Q +
Sbjct: 483 LLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDIGIITPYAAQVMLL- 541
Query: 727 NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 786
R +++ K++E+++VD FQGREK+ II+S VRSN + +GFL D RR+NVA+T
Sbjct: 542 ----RILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVT 597
Query: 787 RARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R+R I+ + + +S ++ +++EH
Sbjct: 598 RSRRQCCIVCDTETVSSDAFLKRMIEYFEEH 628
>gi|366996476|ref|XP_003678001.1| hypothetical protein NCAS_0H03440 [Naumovozyma castellii CBS 4309]
gi|342303871|emb|CCC71654.1| hypothetical protein NCAS_0H03440 [Naumovozyma castellii CBS 4309]
Length = 681
Score = 206 bits (523), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 166/548 (30%), Positives = 265/548 (48%), Gaps = 56/548 (10%)
Query: 297 QSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKST---SFDRMQGAMKTFAVD 353
Q G V+KL+ Q+ + + L SQ + F+ + K+T ++ RM+ M+ A
Sbjct: 122 QCSGVVLKLSEQQ-ITITLEESQEQEATKLYAFNRLHLLKTTNTITYKRMESTMRKLAEF 180
Query: 354 ETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGP 413
+ + I +LL E ++ T + P LN SQ A+K L IS+I GP
Sbjct: 181 DGVPNNKIVQYLLN---ERPFIKQTNSDKITFNN-PNLNKSQTDAIKFALANDISIIHGP 236
Query: 414 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISAT--GLKVVRL------- 464
PGTGKT T ++ + +GQ +VLVC PSN++VD + E++S G ++R+
Sbjct: 237 PGTGKTYTLIELIQQLVAKGQ-RVLVCGPSNISVDTILERLSKALPGNLLLRIGHPARLL 295
Query: 465 ---CAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDE--KKYKA 519
+ S + +S + + + H S++ K++ KD + E K+ +
Sbjct: 296 ESNLSHSLDILSRSGDAGAIVKDIYHDIDKTISDIKKIKSWKDRKEAWRDVKELRKELRV 355
Query: 520 LKRATEREISQSADVICCTCVGAGDPRLANFR------FRQVLIDESTQATEPECLIPLV 573
++ ++ A V+ T G+ L F ++IDE +Q+ EP+C IPL+
Sbjct: 356 REKKVVNDLILEAKVVVATLHGSSSRELCRIYDQVPHLFDTLIIDEVSQSLEPQCWIPLI 415
Query: 574 LGAK----QVVLVGDHCQLGPVIMCK--KAARAGLAQSLFERLVLLGLKPIR--LQVQYR 625
K ++VL GD+ QL P I + K + L +LF+RLV + L VQYR
Sbjct: 416 SHYKSDISKLVLAGDNKQLPPTIKTEDDKKTQLILGTTLFDRLVKHYGDSFKQLLNVQYR 475
Query: 626 MHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR----PMFFYVQMGQEEISA 681
M+ + EF S Y+G L ++ + D P N P+ +Y G + I
Sbjct: 476 MNEDIMEFSSQEMYDGKLLADASVATNVLT--DLPGVENNDDTTVPLIWYDTQGDDYIET 533
Query: 682 SG------TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 735
+ +S N EA V+ V + S V + IG+I+PY Q + I L
Sbjct: 534 AEQDEGIISSKFNENEALLVKHHVIKLIESNVPQTAIGIISPYSAQVSLI-------KKL 586
Query: 736 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
++ Y IE+++VD FQGREK+ IILS VRSN+ +GFL D RRLNVA+TR + + ++
Sbjct: 587 IREDYPLIEISTVDGFQGREKEVIILSLVRSNDKFEVGFLKDERRLNVAMTRPKKQLCVV 646
Query: 796 GNPKVLSK 803
GN + L +
Sbjct: 647 GNIECLER 654
>gi|119467162|ref|XP_001257387.1| tRNA-splicing endonuclease, putative [Neosartorya fischeri NRRL 181]
gi|119405539|gb|EAW15490.1| tRNA-splicing endonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 2076
Score = 205 bits (522), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 251/537 (46%), Gaps = 108/537 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQG-------------- 435
+N +Q A+KS L +LIQGPPG+GKT T A+V + G
Sbjct: 1293 VNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSNVLGDQGVTISRPMGVAN 1352
Query: 436 -----------QVLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAVSSP 475
++LVCAPSN AVD+L + L V+RL +A+++
Sbjct: 1353 PRVPVRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRHEKLNVIRLGRS--DAINTN 1410
Query: 476 VEHLTLHYQV------------------------RHLDTSEKSELHKLQQ---------- 501
V +TL V + DT+ K K+ Q
Sbjct: 1411 VLDVTLDELVNARLSQNPRKDSGQRDLQTIYMEHKAADTAFKETRAKIDQCRAQGLPVPE 1470
Query: 502 --------LKDEQGELS----SSDEKKYKALK------RATEREISQSADVICCTCVGAG 543
LK ++ +LS ++ +K + A + R ++EI A VIC T G+G
Sbjct: 1471 ELEREFDLLKKKKTQLSQEIDTARDKNHSAARDADLNRRRIQQEIINGAHVICATLSGSG 1530
Query: 544 DPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
N F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A++
Sbjct: 1531 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1590
Query: 602 LAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP 660
QSLF R+ + + L QYRMHP +S +PS +FY+G L++G + + ++ P
Sbjct: 1591 YEQSLFVRMQANHPRDVHLLDTQYRMHPEISVYPSAAFYDGKLKDGPNMAKLRAR----P 1646
Query: 661 WPVPNR--PMFFYVQMGQEEISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGV 714
W P F+ G + + G S +N R E++++ F R +IG+
Sbjct: 1647 WHQSELLGPYRFFDVQGLHQNTTKGHSLINLAELRVAMQLYERLISDF-RDYDFSGKIGI 1705
Query: 715 ITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+GQ R + +R G ++ ++ + D+FQGRE + II SCVR++ ++GIG
Sbjct: 1706 ITPYKGQLRELKTQFAARYG---NSIFNMVDFNTTDAFQGRESEVIIFSCVRAS-NKGIG 1761
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
FL D RR+NV LTRA+ + +LGN + L + WNGL+ + +G + ++ Q
Sbjct: 1762 FLADIRRMNVGLTRAKSSLWVLGNSQSLMQGEFWNGLIKDARRRNVYTDGDILDILQ 1818
>gi|194218569|ref|XP_001917022.1| PREDICTED: DNA-binding protein SMUBP-2 [Equus caballus]
Length = 1004
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 239/460 (51%), Gaps = 51/460 (11%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ASQ AVK L Q+ +++I GPPGTGKT T ++ + KQG +VL CAPSN+AVD
Sbjct: 212 LDASQKEAVKFALSQKELAVIHGPPGTGKTTTVVEVILQVVKQGL-KVLCCAPSNIAVDN 270
Query: 450 LAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKL 499
L E+++ +++RL +R +AV + ++ + +R D + +K
Sbjct: 271 LVERLAQCKQRILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRK-DIDQVFVKNKK 329
Query: 500 QQLKDEQGELSSSDEKKYKALKRATEREISQS---ADVICCTCVGAGD----PRLANFRF 552
Q K E+ S + K LK E + +S ADV+ T GA L + F
Sbjct: 330 IQEKQEKSNFRSEIKLLRKELKEREEAAMLESLTSADVVLATNTGASPDGPLKLLPDGYF 389
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL-V 611
V+IDE QA E C IPL L A++ VL GDH QL P I+ KAA AGL+ SL ERL
Sbjct: 390 DVVVIDECAQALEASCWIPL-LKARKCVLAGDHKQLPPTIVSHKAALAGLSLSLMERLDQ 448
Query: 612 LLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQN-------------GVTINERQSSGI 657
G + +R L VQYRMH ++ ++ S + Y G L GV E +G+
Sbjct: 449 EYGARVVRTLTVQYRMHQAIMQWASEALYAGQLTAHPSVAGHLLRDLPGVAATE--ETGV 506
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
P + + ++ +E+ + G R A +V+ +V +GV S I VITP
Sbjct: 507 --PLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVALHVQALVD----AGVCASDIAVITP 560
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q V+ + ++ A R + E+E+ SVD FQGREK+ +ILS VRSN +GFL +
Sbjct: 561 YNLQ----VDLLRQSLAHR---HPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAE 613
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
RR+NVA+TRAR + ++ + + ++ LL + H
Sbjct: 614 DRRINVAVTRARRHVAVVCDSRTVNNHAFLKTLLDYCTVH 653
>gi|167384737|ref|XP_001737082.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900358|gb|EDR26702.1| hypothetical protein EDI_272190 [Entamoeba dispar SAW760]
Length = 1001
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 173/297 (58%), Gaps = 12/297 (4%)
Query: 527 EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
EI + + +C T L +F ++DE+ Q+ EPE L ++ ++ VL+GD
Sbjct: 606 EILKGIECVCSTLTTCTRSTLLKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDIQ 664
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVL-LGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQN 645
QL P + +A AG +S+FER + +K L+ QYRMHP++ EF + FY L+N
Sbjct: 665 QLQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAIVEFSNKMFYSSKLEN 724
Query: 646 GVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS 705
GV+ +R S I +P P+ F G+EE +SGTSY N E ++ IV L++
Sbjct: 725 GVSNEDRFDSRIINFFPDYTNPIMFINCDGREECGSSGTSYNNEGEVLIIKHIVGGLLKN 784
Query: 706 GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 765
V ++IG+I+PY+ Q+ I +S +I+VA++D FQG EK+YII SCVR
Sbjct: 785 KVKENEIGIISPYQAQQELISQCVS----------TKIKVANIDGFQGNEKEYIIFSCVR 834
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVE 822
SN+ GIGF++D +RLNVALTRA+ G++++GN + L +W+ L+ H+ + L E
Sbjct: 835 SNQTLGIGFVSDYKRLNVALTRAKCGLIVIGNIQTLIGSKVWSMLVHHFYLRDALFE 891
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 379 LPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMA-------- 430
L ++ P L LN Q+ A+ + L ISL+ GPPGTGKT + +I ++
Sbjct: 353 LTDKYNIPNLSNLNDYQIKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKHRFYN 412
Query: 431 -KQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCA 466
+ + ++LVCA SN AVD + K+ G+ +R+ A
Sbjct: 413 RNRAERRLLVCASSNNAVDVICSKLIEKGIPTIRIVA 449
>gi|440750068|ref|ZP_20929312.1| dna-binding protein smubp-2 [Mariniradius saccharolyticus AK6]
gi|436481109|gb|ELP37290.1| dna-binding protein smubp-2 [Mariniradius saccharolyticus AK6]
Length = 642
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 257/543 (47%), Gaps = 93/543 (17%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFG--APGL 388
VD ++ S+ M+ AMK+ E G LLG + FG P
Sbjct: 130 VDLLFDEASYREMESAMKSVIQSEKGRLGAFKQILLGEK----------SPEFGPIEPLE 179
Query: 389 PE-LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVA 446
E LN SQ A+ V+ + +++I GPPGTGKT T A + K QV+V APSN A
Sbjct: 180 VEGLNESQNQALGLVVATKDVAVIHGPPGTGKTTTLVASIVETLK-SVSQVMVTAPSNAA 238
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQ 506
VD L EK+ G+K +R+ +R V + TL ++ ++ + +L ++++ DE
Sbjct: 239 VDLLVEKLVTQGIKTLRIGHPAR--VDEQILAQTLDAKIAQHESYK--DLKRVKKSVDEL 294
Query: 507 GELSSSDEKKYKALKRATER----------------------EISQSADVICCTCVGAGD 544
+L+S ++ Y +R +R +I Q V+ CT VGA
Sbjct: 295 RKLASKYKRNYGQEERMQKRRMLDEVARARDEAAQLEDYIVYDIFQETQVVACTLVGAAH 354
Query: 545 PRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQ 604
L +F V IDE+ Q EP IP V A++VV+ GDHCQL P I +AA+ GLA+
Sbjct: 355 SMLDGRKFPVVFIDEAAQGLEPAVWIP-VQKAQKVVMAGDHCQLPPTIKSYEAAQGGLAE 413
Query: 605 SLFERLVLLGLKPI---RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
+LFE+++ KP L VQYRM ++ F S+ FY L
Sbjct: 414 TLFEKVI--KRKPSASHMLNVQYRMPELIAGFSSDFFYRRDLH----------------- 454
Query: 662 PVPNRPMFFYVQMG--QEEISASGTSYLNRTEAANVEKIVTTF----------------L 703
PN F + E I +G+ + +TE E+ +TF
Sbjct: 455 AAPNTRYHFLDEAEPVLEFIDTAGSGFAEQTE----EETFSTFNPEEAKFCLGQLESLIK 510
Query: 704 RSGVVPSQ-----IGVITPYEGQ--RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREK 756
R G+ + IG+I PY+ Q + + + S N + + + + S+D FQG+E+
Sbjct: 511 RIGIAKIKTAAWNIGLIAPYKAQVRKFNELLFESYNYPNLRSFSELLTIDSIDGFQGQER 570
Query: 757 DYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
D I+LS VRSN IGFL+D RR+NVALTRA+ ++++G+ LS P ++ + + +
Sbjct: 571 DIILLSLVRSNTKNEIGFLSDTRRMNVALTRAKRKLIVVGDSATLSAHPFYHAYIDYVES 630
Query: 817 HEC 819
H C
Sbjct: 631 HGC 633
>gi|74142749|dbj|BAE33905.1| unnamed protein product [Mus musculus]
Length = 606
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 232/432 (53%), Gaps = 38/432 (8%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + + +VLV + +NVAVD++
Sbjct: 152 PITVIHGVFGAGKSYLLAVVILFLVELFEKCDSGTVGNARPWKVLVSSSTNVAVDRVLLG 211
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G K +R+ S ++ PV L Y + +E +L +L L E EL+
Sbjct: 212 LLSLGFEKFIRV--GSVRKIAKPV----LPYSLHAGSDNESEQLKELNALLKE--ELTPI 263
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T R + + V+ TC P L + +F V++DE +Q TEP
Sbjct: 264 ERVYVRKSIEQHKLGTNRVLLKQVRVVGVTCAACAFPCLNDLKFPVVVLDECSQMTEPAS 323
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KP+ L+ QYR
Sbjct: 324 LLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPVLLRTQYRC 383
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP++S ++ FYEG+L NG I+ER+ S + W +P + FY G E++ S+
Sbjct: 384 HPAISAIANDLFYEGSLVNG--ISERERSPV-LEW-LPT--LCFYNVTGAEQVEREN-SF 436
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
+N EA K++ + + SGV IGVIT Y+ Q I N +S + K ++V+
Sbjct: 437 VNVAEATFTLKLIQSLMASGVESCMIGVITLYKSQMYKICNLLSAVDVGHPDV-KAVQVS 495
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ ILSCVR+ + +GF++ +R+NVALTR R ++I+G+ L K L
Sbjct: 496 TVDAFQGAEKEITILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGSLSCLRKNRL 552
Query: 807 WNGLLTHYKEHE 818
W ++ H + E
Sbjct: 553 WGRVIQHCEGRE 564
>gi|159475128|ref|XP_001695675.1| predicted protein [Chlamydomonas reinhardtii]
gi|158275686|gb|EDP01462.1| predicted protein [Chlamydomonas reinhardtii]
Length = 624
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 208/425 (48%), Gaps = 63/425 (14%)
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRL--CAKSREAVSSPVEHLTLHYQVRHLDTSE 492
G +L A +N AVD + + A G++ VRL AK+RE++ H +L Q
Sbjct: 11 GPLLAVADTNAAVDNIVGGLVARGVRCVRLGPAAKARESL----RHFSLEAQAEATPAGR 66
Query: 493 KSELHKLQQLKDEQGELSSSDE-----KKYKALKRATEREISQSADVICCTCVGAGDPRL 547
K+ + + ++ +L +DE +K + R + A+V+ CTC AGD L
Sbjct: 67 KAAALRAAAVAKQE-QLREADEARRDLEKAEGALREAAAAVVAGAEVVVCTCTSAGDSLL 125
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
+R V++DE++QATEP L+ L GA VV+ GD QL P ++ +A AGL +LF
Sbjct: 126 EGRPWRCVVVDEASQATEPSVLVALTRGAAFVVMAGDPRQLPPTVLSDQALEAGLGVTLF 185
Query: 608 ERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRP 667
ER+ G+ P+ L QYRMHP +S FPS FY G L++GV ++ F WP P P
Sbjct: 186 ERVASGGVAPLLLDTQYRMHPLISAFPSAYFYGGKLRDGVAAADKPVP-RGFAWPKPGVP 244
Query: 668 M-FFYVQMGQEEISA---------------------------------------SG---- 683
+ V+ GQEE S SG
Sbjct: 245 LALVEVRGGQEETSGDVSEAAATAAAAAATSASVLQPKGPAAAAAAAAKAQAAASGPPKS 304
Query: 684 ---TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNG--ALRQQ 738
+SY N EA + L G + S ++TPY GQ + + + G A
Sbjct: 305 GDRSSYRNPAEALAALAVTQKLLAGGDI-SSAAILTPYRGQVRLVEALLRQRGLDAAWAA 363
Query: 739 LYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNP 798
+E+ V++VD +QGRE D ++ S VR+NE +GFL+DPRR+NVA+TR R G+V+L +
Sbjct: 364 AGREVAVSTVDGYQGREADVVVFSAVRANERGAVGFLSDPRRMNVAITRPRRGLVVLADG 423
Query: 799 KVLSK 803
LS+
Sbjct: 424 PTLSR 428
>gi|319957167|ref|YP_004168430.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
gi|319419571|gb|ADV46681.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
Length = 733
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 236/471 (50%), Gaps = 78/471 (16%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN Q+ A++ L + LI GPPGTGKT T ++ A +G +L A SNVAVD
Sbjct: 245 LNEPQLEALRRSLGMEELFLIHGPPGTGKTTTLTRVIQAHASKGM-HILATADSNVAVDN 303
Query: 450 LAEKISATG-LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQG- 507
L EK++ G L+++R+ +R + S +E +L Q+ + E E+ +LQ+ +
Sbjct: 304 LLEKLAGDGDLRLIRVGHPAR--IDSSLERFSLMRQL--TEAPEYQEIRELQRQAETAAR 359
Query: 508 -----------------------------------------------ELSSSDE--KKYK 518
E S ++E ++ +
Sbjct: 360 ERARYSKPTPARLRGMSRDRVLKLAKEGRSSRGVSAETIRSMARWIEEDSKTEEAFERLR 419
Query: 519 ALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQ 578
+L+ AT + ++ADV+ T G L F ++DE +Q EP L+PL L A +
Sbjct: 420 SLESATISRLLEAADVVLATNSMVGSDALEGMSFDLAVVDEGSQQIEPSTLLPL-LRAPR 478
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP-IRLQVQYRMHPSLSEFPSNS 637
VL GDH QL P ++ L +SLFERL+ L P L+VQYRMH ++ +FP+
Sbjct: 479 GVLAGDHRQLPPTVLSDLEI---LKRSLFERLISRKLVPATMLRVQYRMHETIMDFPNRL 535
Query: 638 FYEGTLQNGVTINERQSSGIDFPWPVP-NRPMFFYVQMGQEEISAS------GTSYLNRT 690
Y+G L ++ R++ ++ P P P F V E+ AS TSY N T
Sbjct: 536 MYDGALVADPSVA-RRTLPVEKPPEDPCLDPSFPVVFADTSEMEASEHLPERSTSYENPT 594
Query: 691 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 750
EA ++ + VT + G+ P+QIG+ITPY Q + + + ++EV SVD
Sbjct: 595 EAGHLLRWVTELVACGIAPAQIGIITPYLAQVKLLRRLLEE--------FPDVEVKSVDG 646
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
FQGREK+ I++S VRSN Q +GF++DPRRLNVA+TRAR ++++G+ L
Sbjct: 647 FQGREKEVILISFVRSNLAQSVGFVSDPRRLNVAMTRARSKLLMIGDRSTL 697
>gi|327306928|ref|XP_003238155.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
gi|326458411|gb|EGD83864.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
Length = 2196
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 193/649 (29%), Positives = 285/649 (43%), Gaps = 132/649 (20%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM-----AKQGQGQ------- 436
+LN +Q A+KS + +LIQGPPG+GKT T AIV + A++ Q
Sbjct: 1317 DLNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALLTPILAERRVSQPKIISDS 1376
Query: 437 -----------VLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAVSSP 475
+LVCAPSN AVD+L + G+K V+RL +A+++
Sbjct: 1377 AQASKSASSKKLLVCAPSNAAVDELVMRFKE-GVKTLNGKTQPISVIRL--GRSDAINAN 1433
Query: 476 VEHLTLH-----------------------YQVRHLDTSEK------------------- 493
V +TL Y H +TS K
Sbjct: 1434 VLDVTLDELVNAKLNQSGQTKNGEERDLQSYFNEHKETSAKFIEIRQRIDQCRARAEPVS 1493
Query: 494 SELHK-LQQLKDEQGELSSS-----DEKKYKA-----LKRATEREISQSADVICCTCVGA 542
+EL + LK ++ +LS + D+ + A +R ++EI A VIC T G+
Sbjct: 1494 NELEREFDLLKRKKAQLSQAIDNARDKNQAAARNAELTRRRIQQEIIDGAHVICSTLSGS 1553
Query: 543 GDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G + F V+IDE+ Q+ E LIPL G + VLVGD QL P ++ K+A+R
Sbjct: 1554 GHEMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRF 1613
Query: 601 GLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
QSLF R+ + L QYRMHP +S+FPS +FY+G LQ+G + +
Sbjct: 1614 QYEQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPAMGPLRKK---- 1669
Query: 660 PWPVPNR--PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL---RSGVVPSQIGV 714
PW P F+ G + G S +N E ++ L R+ +IG+
Sbjct: 1670 PWHGSELLGPYRFFDVQGMHSSATKGHSLVNIAELTVAMRLYERLLADYRNYEFAGKIGI 1729
Query: 715 ITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
ITPY+GQ R + ++ G+ ++ +E + D+FQGRE + II SCVR+++ +GIG
Sbjct: 1730 ITPYKGQLRELKSRFAAKYGS---SIFTTVEFNTTDAFQGRECEVIIFSCVRASD-RGIG 1785
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
FL+D RR+NV LTRA+ + +LGN + L + W L+ +E + EG + +
Sbjct: 1786 FLSDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARERQLYTEGDILRI----- 1840
Query: 834 QFQKPKKIYNDRRLFFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGLHP 893
QKP +I D L P ++ + R GS G PP+ P
Sbjct: 1841 -LQKP-QISLDMEL-NNVEMVDAPTEVGNIPTPSSRPGSSMAGSSNSRPPSRLSNP---- 1893
Query: 894 AGFPMPRVPLPPFQGGPPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFG 942
Q S P + S AV PV + H P G G
Sbjct: 1894 -------------QSAAESLPSELLSGSAVGTPVPYLPHGPSGGKSGLN 1929
>gi|328853328|gb|EGG02467.1| hypothetical protein MELLADRAFT_38533 [Melampsora larici-populina
98AG31]
Length = 701
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 239/477 (50%), Gaps = 81/477 (16%)
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AV+ L PI+L+ GPPGTGKT T +I+ + +G ++L+ A SN+A+D
Sbjct: 219 LNDSQQRAVRHALSPAPITLVFGPPGTGKTHTLVSIISALHARGD-RILIAAASNLAIDN 277
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE-----KSELH-KLQQL- 502
+AE++ A L + RL +R V + TL +Q D SE K E++ KL +L
Sbjct: 278 IAERLLAKQLPLTRLGHPAR--VLDSLSQSTLDHQCNTFDGSEIIRDLKVEINGKLNKLS 335
Query: 503 ---KDE-QGELSSS---DEKKYKALKRATERE----ISQSADVICCTCVGAGDPRLANFR 551
KD+ +G+ S+ D K + R ER+ I + A ++C T GAG +L N
Sbjct: 336 AQGKDKLRGKARSTVYMDIKDLRKDYRQRERKHTDGIIKQARIVCATTHGAGSRQLENQV 395
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC----------------- 594
F V+IDESTQA E C IP++ +V+L GD QL P I
Sbjct: 396 FDVVIIDESTQAYEAACWIPILKSKSKVILAGDPLQLPPTINLSERVGALTDLETTGKPT 455
Query: 595 --KKAARAG---------LAQSLFERLVLLGLK-PIRLQVQYRMHPSLSEFPSNSFYEGT 642
+K R G L ++F+RL+ L VQYRMH + EFPS Y+G
Sbjct: 456 TKEKPTRRGFFMMKPPKSLEVTMFDRLLKSNTSISCLLDVQYRMHSMIMEFPSKQLYKGK 515
Query: 643 LQNGVTI-----------NERQSSGIDFPWPVPNRPMFFYVQMG---QEEISASGT--SY 686
L+ ++ +E + GI P+ F G + I+ G S
Sbjct: 516 LKAAESVAGHLLKDLPNVSESDNDGI-------ADPVLFIDTAGSHMHDRIAEEGGDGSV 568
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
+N EA V K VT FL +G++P QI V++PY Q A + + + Y + +
Sbjct: 569 MNENEANLVVKQVTDFLEAGLLPEQIMVLSPYSAQVALLSSLLKSL-------YPTLAIG 621
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
S+DS QGRE + +ILS VRSN +GFL++ RRLNVA+TRA+ + I+G+ LSK
Sbjct: 622 SIDSCQGRENEAVILSLVRSNTEGVVGFLHETRRLNVAMTRAKRSLTIIGDSDTLSK 678
>gi|432861602|ref|XP_004069646.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Oryzias latipes]
Length = 987
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 177/566 (31%), Positives = 274/566 (48%), Gaps = 49/566 (8%)
Query: 279 PGDELRLRYSGDAAHPAWQSVGHVIKLT-AQEEVALELRASQGVPVDINHGFSVDFVWKS 337
PGD + L + + + G V +++ A VA+++ V +D N +++ +
Sbjct: 82 PGDIVGLYDAAGCSATSQICTGIVTRVSQASVSVAIDILKDDAV-LDTNSLYNLLKLAND 140
Query: 338 TSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVF 397
++ RM+ A+ +G I + L G+ Q ++ P +F L + SQ
Sbjct: 141 VTYKRMKRALNVLNGYSNGPAGNIINVLFGN---AQPSSHSQPIQFFNSNLDD---SQRE 194
Query: 398 AVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISA 456
AV L QR +++I GPPGTGKT T I+ KQGQ +VL CAPSNVAVD L E+++
Sbjct: 195 AVMFALSQRELAVIHGPPGTGKTTTVVEIILQAVKQGQ-KVLCCAPSNVAVDNLVERLAQ 253
Query: 457 TGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE-----KSELHK-LQQLKDEQGELS 510
KV+RL +R + ++ +L + D + + ++ K L +K E+GE
Sbjct: 254 CKAKVLRLGHPAR--LLESIQKHSLDAILAQSDNANIIADIRKDIDKVLMGMKKEKGERG 311
Query: 511 SSD------EKKYKALKRATEREISQSADVICCTCVGAGD----PRLANFRFRQVLIDES 560
+ +K+ K+ + +I + ADV+ T GA D L F V+IDE
Sbjct: 312 NYKREIGELKKELKSREATAITQILKGADVVLSTNTGACDDGPLKLLPAEHFDWVVIDEC 371
Query: 561 TQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIR 619
QA E C I L L A++ +L GD+ QL P I + AA GL+ SL ER++ + G +R
Sbjct: 372 AQALESSCWIAL-LKARKCILAGDYKQLPPTIKSQAAASKGLSLSLMERVIQIYGDVVVR 430
Query: 620 -LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP--NRPMFFYVQMGQ 676
L VQYRM+ ++ E+ S Y+G L ++ + V + P+ G
Sbjct: 431 MLTVQYRMNSAIMEWASKEMYQGKLTAHCSVESHLLKDLTGVASVAETSTPLLLIDTAGS 490
Query: 677 ---EEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNG 733
E S N+ E VE + +GV I VI PY Q
Sbjct: 491 GLTEMEVTDEQSKGNQGEVDIVELHIKALTEAGVKAKDIAVIAPYNLQVDL--------- 541
Query: 734 ALRQQL---YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARY 790
LRQ+L + E+E+ SVD FQGREK+ ++LS VRSN +GFL++ RR+NVA+TRAR
Sbjct: 542 -LRQRLSARHPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLSEDRRINVAVTRARR 600
Query: 791 GIVILGNPKVLSKQPLWNGLLTHYKE 816
I ++ + + + L+ H E
Sbjct: 601 HIAVVCDTQTVQNHAFLKSLVDHMTE 626
>gi|340521489|gb|EGR51723.1| Hypothetical protein TRIREDRAFT_55637 [Trichoderma reesei QM6a]
Length = 1734
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 215/436 (49%), Gaps = 53/436 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ-GQVLVCAPSNVAVDQ 449
LN SQ AV++ + + + GPPGTGKT T AI+ + + ++LV AP++ AVD
Sbjct: 1300 LNPSQRAAVEAAQRNNLICLWGPPGTGKTQTIVAIIRTLQFDPRSARILVTAPTHNAVDN 1359
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGEL 509
+ + ++ + +S + L + +VR + +L K E+
Sbjct: 1360 VMRR-------YLKRIEQEDALQNSKIVPLRVATEVRKV----GEDLRKYTCDALAGQEV 1408
Query: 510 SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECL 569
SS + KA KR E A +I TC+GAG L + F V++DE++Q TEP L
Sbjct: 1409 YSSQDAMRKAKKRVKE------AGIIFTTCIGAGLGLLRDQFFDTVIVDEASQQTEPASL 1462
Query: 570 IPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL-----VLLGLKPIRLQVQY 624
+PL+ G ++ +LVGDH QL P + A SLFERL + G++ + L QY
Sbjct: 1463 VPLIKGCQKAILVGDHVQLRPTVQ-NIALALNFDVSLFERLYTRQEMTRGMEKVMLDTQY 1521
Query: 625 RMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP--------VPNRPMFFYVQMGQ 676
RMHPS+ F S FY+G L +G+T +R FPWP M F G+
Sbjct: 1522 RMHPSICSFISKEFYDGKLLSGLTGKDRPMPPSSFPWPEAPSTSSSASAPRMIFIECAGR 1581
Query: 677 EEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ----------IGVITPYEGQRAYIV 726
E++ S E A++ + LR+ S I V+TPY Q +
Sbjct: 1582 EDLGHKSKS---NKEQADLCHSICKLLRTSAAGSSTEPEANDDASIAVLTPYSRQSEVLK 1638
Query: 727 NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 786
+S IE++S+D FQGRE D +I VR NE + IGFL D RR+NVALT
Sbjct: 1639 RLLSG--------IPNIEISSIDGFQGREADIVIFVTVRCNESREIGFLKDLRRMNVALT 1690
Query: 787 RARYGIVILGNPKVLS 802
RA+YG++I+GN L+
Sbjct: 1691 RAKYGMIIVGNRATLT 1706
>gi|145505511|ref|XP_001438722.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405894|emb|CAK71325.1| unnamed protein product [Paramecium tetraurelia]
Length = 743
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 233/457 (50%), Gaps = 41/457 (8%)
Query: 383 FGAPGLPELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F + +LN Q AV+ + +P ISLI GPPGTGKT T + + ++L CA
Sbjct: 208 FQGDTIKQLNDQQKIAVQKAMNQPHISLIHGPPGTGKTRTVCEYIKQAVLVQRHKILACA 267
Query: 442 PSNVAVDQLAEKI-SATGLKVVRLCAKSREAVSSPVEHLTLHYQVRH-----LDTSEKSE 495
SN+AVD + E+I + + LKV R+ +R ++ V ++ + V+ + + K+E
Sbjct: 268 NSNIAVDNMIERIQNISQLKVCRIGNPAR--MTDQVRYVCIDQLVKKTTSYAIMKTIKTE 325
Query: 496 LHKLQQL-----KDEQGELSSS---DEKKYKALKRATEREISQSADVICCTCVGAGDPRL 547
+ ++++ + E EL +K+Y ++ E Q VI T VG+G +
Sbjct: 326 IQQIEKKLNRAERREAAELRDKLKQKKKEYFEQQQLAYEEAIQDCQVIFSTNVGSGQFQF 385
Query: 548 ----ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
N +F V+IDE Q+ E C IP++ G K VVL GDHCQL P + K GL
Sbjct: 386 QQLTKNIKFDVVVIDECAQSLEISCWIPILKGNK-VVLAGDHCQLPPTV---KTKNTGLE 441
Query: 604 QSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV 663
+LFER+ I L VQYRM+ S+ ++ S FY+G L T+ R S + V
Sbjct: 442 MTLFERVENELHVNILLTVQYRMNKSIMQWSSQEFYDGHLVADQTVANRTVSDTILLF-V 500
Query: 664 PNRPMFFYVQMGQEEI---SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEG 720
FY Q QE + S N EA V+ I + GV IG+ITPY
Sbjct: 501 DTSCCDFYEQQ-QESLLYFDDQNKSKYNVGEAGLVQIISEELINLGVQKQDIGIITPYNA 559
Query: 721 QRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
Q + + ++ +IE+++VD FQGREKD II+S VRSN+ +GFL + RR
Sbjct: 560 QVQLLKSKIN-----------DIEISTVDGFQGREKDCIIISMVRSNQMGEVGFLCESRR 608
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+NVA+TRA+ + ++G+ + +S L+ ++ E+
Sbjct: 609 MNVAVTRAKKFVCLIGDSETVSNDAFLKRLIDYFVEN 645
>gi|297737213|emb|CBI26414.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 237/454 (52%), Gaps = 64/454 (14%)
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 463
+RPI +IQGPPGTGKTV ++ +QG+ +VLV AP+N AVD + EK+S G+ +VR
Sbjct: 330 KRPILIIQGPPGTGKTVLLKELIALAVQQGE-RVLVTAPTNAAVDNMVEKLSNIGVNIVR 388
Query: 464 LCAKSR-----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ--LKDEQGELS 510
+ +R E V+S +E+ ++ +KS+L K + LKD+ L+
Sbjct: 389 VGNPARISSAVASKSLGEIVNSKLENFLTEFE------RKKSDLRKDLRHCLKDDS--LA 440
Query: 511 SSDEKKYKALKRATEREIS-------QSADVICCTCVGAGDPRLANFR-FRQVLIDESTQ 562
+ + K L +A +++ SA V+ T GA DP + F V+IDE+ Q
Sbjct: 441 AGIRQLLKQLGKALKKKEKETVKEVLSSAQVVLATNTGAADPVIRRLDAFDLVIIDEAGQ 500
Query: 563 ATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRL 620
A EP C IP++ G K+ ++ GD CQL PVI+ +KA GL SL ER L + +L
Sbjct: 501 AIEPSCWIPILQG-KRCIIAGDQCQLAPVILSRKALEGGLGVSLLERAATLHEEVLATKL 559
Query: 621 QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP------------NRPM 668
QYRM+ +++ + S Y G+L++ ++ +D P+ P R
Sbjct: 560 TTQYRMNDAIASWASKEMYGGSLKSSSSVFSHLL--VDSPFVKPAWITQCPLLLLDTRMP 617
Query: 669 FFYVQMGQEE-ISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV 726
+ + +G EE + +GT S+ N EA V + V + + +GV P+ I V +PY Q
Sbjct: 618 YGSLSVGCEEHLDPAGTGSFYNEGEADIVVQHVLSLISAGVSPTAIAVQSPYVAQVQL-- 675
Query: 727 NYMSRNGALRQQLYK-----EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRL 781
LR +L + +EVA++DSFQGRE D +I+S VRSN +GFL D RR+
Sbjct: 676 --------LRDRLDEIPEAVGVEVATIDSFQGREADAVIISMVRSNTLGAVGFLGDSRRM 727
Query: 782 NVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
NVA+TRAR + ++ + + LL H +
Sbjct: 728 NVAITRARKHVAVVCDSSTICHNTFLARLLRHIR 761
>gi|183233537|ref|XP_654409.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169801534|gb|EAL49041.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 979
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 191/342 (55%), Gaps = 13/342 (3%)
Query: 498 KLQQLKDEQGELSSSDEKKYKALKRATE-REISQSADVICCTCVGAGDPRLANFRFRQVL 556
++Q++ D + + +E +Y +T +I + +C T + +F +
Sbjct: 591 EIQKIIDRVSQRITLEENRYINNFTSTHFDDILSGIECVCSTLTICTRSIMLKQKFFASI 650
Query: 557 IDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL-LGL 615
+DE+ Q+ EPE L ++ ++ VL+GD QL P + +A AG +S+FER + +
Sbjct: 651 VDEAAQSLEPETLAGII-NVRKTVLIGDIQQLQPTCLSTEAREAGFQKSMFERFMANTQI 709
Query: 616 KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMG 675
K L+ QYRMHP++SEF + FY L+NGV+ ++R I +P P+ F G
Sbjct: 710 KRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSSDDRFDDRIINFFPDYTNPIMFINCDG 769
Query: 676 QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 735
E +SGTSY N E ++++V L + + ++IG+I+PY+ Q+ I Y+S
Sbjct: 770 TEHYGSSGTSYNNAGEVQIIQEVVEKLLNNDIEENEIGIISPYQAQQELISQYVS----- 824
Query: 736 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
+I+VA++D FQG EK+YII SCVRSN+ G+GF+ND +RLNVALTRA+ G++I+
Sbjct: 825 -----TKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALTRAKSGLIII 879
Query: 796 GNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQK 837
GN L +WN L+ + + L E ++ Q V+ Q+
Sbjct: 880 GNIPTLITSKVWNMLIHQFYLRDALFELKEHDFVQYNVENQE 921
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 357 VSGYIYHHLLGHEVEVQMVRNTL------PRRFGAPGLPELNASQVFAVKSVLQRPISLI 410
+ GY L +++++ + + ++ P L LN Q A+ + L ISL+
Sbjct: 324 IDGYYSKILCCNKIQLTKTKEIITYEEMSEEKYNIPNLSNLNDYQTKAIYNALNEDISLV 383
Query: 411 QGPPGTGKTVTSAAIV---------YHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKV 461
GPPGTGKT + +I ++ +G+ ++LVCA SN AVD + K+ G+
Sbjct: 384 IGPPGTGKTTVAVSIAQYLIYNKRRFYKINRGEKKLLVCASSNNAVDVICSKLIEKGIPT 443
Query: 462 VRLCA 466
VR+ A
Sbjct: 444 VRVVA 448
>gi|301614127|ref|XP_002936547.1| PREDICTED: DNA-binding protein SMUBP-2-like, partial [Xenopus
(Silurana) tropicalis]
Length = 912
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 236/460 (51%), Gaps = 51/460 (11%)
Query: 391 LNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ AV S+ QR +++I GPPGTGKT T I+ K+G +VL CAPSNVAVD
Sbjct: 119 LDDSQKEAVSFSLNQREVAVIHGPPGTGKTTTVVEIILQAVKEGL-KVLCCAPSNVAVDN 177
Query: 450 LAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRH-LDTS--EKSEL 496
L E++S K++RL +R +AV + ++ + +R +D + + +L
Sbjct: 178 LVERLSVFKEKILRLGHPARLLESLQHHSLDAVLARSDNAQIVADIRRDIDQTFAKMKKL 237
Query: 497 HKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGD----PRLANFRF 552
H Q+ + E+ + K+ K + A E + A+VI T GA L F
Sbjct: 238 HGKQEKSGYRTEIKAL-RKELKEREEAAMVETLKRANVILATNTGASLDGPLKLLPEDYF 296
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV- 611
V+IDE QA E C I L L AK+ +L GDH QL P I+ KAA GL+ SL ER+
Sbjct: 297 DLVVIDECAQALEASCWISL-LQAKKCILAGDHKQLPPTIISHKAAANGLSLSLMERVTE 355
Query: 612 LLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQN-------------GVTINERQSSGI 657
G K ++ L VQYRMH S+ ++ S + Y G L GV++ E S
Sbjct: 356 KYGEKVVKMLTVQYRMHQSIMQWASEALYGGRLTAHSSVSQHLLKDLPGVSVTEETS--- 412
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
P + + +M E+ + G N E V+ + ++GV P I VI P
Sbjct: 413 -IPLLLIDTAHCGLFEMEVEDEQSKG----NPGEVQLVDLHIQALTKAGVKPQDIAVIAP 467
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q V+ + + LRQ+ Y ++E+ SVD FQGREK+ ++LS VRSN +GFL +
Sbjct: 468 YNLQ----VDMLRQ--CLRQR-YPDLEIKSVDGFQGREKEAVVLSFVRSNSKGEVGFLAE 520
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
RR+NVA+TRAR + ++ + + L+T++ EH
Sbjct: 521 DRRINVAVTRARRHVAVICDSHTVGNHQFLKDLITYFSEH 560
>gi|395331022|gb|EJF63404.1| hypothetical protein DICSQDRAFT_102653 [Dichomitus squalens LYAD-421
SS1]
Length = 1922
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 165/523 (31%), Positives = 253/523 (48%), Gaps = 103/523 (19%)
Query: 389 PELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV-YHMAKQGQ-----------GQ 436
P+ NA +KS+ +LIQGPPGTGKT T +V +++++ + +
Sbjct: 1279 PQANA----ILKSLDTEGFALIQGPPGTGKTSTICGLVQLYLSRRSKTIGRPGDKEIPKK 1334
Query: 437 VLVCAPSNVAVDQLA----EKISATGL-----KVVRLCA--------------------- 466
+L+CAPSN A+D++A E +S G KVVR+ A
Sbjct: 1335 ILLCAPSNAAIDEIAFRLKEGVSGAGHRAEHPKVVRIGAPKAMNLSVRDVSLEYLMDQKL 1394
Query: 467 -------KSREA------VSSPVEHLTLHYQ-------VRHLDTSE----KSELHKLQQL 502
++EA V + +E + + Q + H + ++ + ++ KL +
Sbjct: 1395 NAHPELQNTKEAGTELARVRAELESVKVQRQQKMDEMALTHDNAAKTLALEDDIKKLNRA 1454
Query: 503 K-------DEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
K D+ + SD + A +R E+ Q ADVIC T + L +F F V
Sbjct: 1455 KAMLTHQLDKVKDKQKSDYRTLDATRRRFRNEVLQEADVICSTLSASAYEYLESFDFEVV 1514
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL 615
+IDE+ QA E LIP+ + ++VGD QL P + ++A R G QSLF RL
Sbjct: 1515 IIDEAAQAIELSSLIPMKYRCRTCIMVGDPQQLPPTVKSQEACRLGYDQSLFVRLQKSQP 1574
Query: 616 KPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW---PVPNRPMFFY 671
+ L +QYRMHP +S+ PSN FY+G L +G + + PW P FF
Sbjct: 1575 DAVHLLSIQYRMHPDISQLPSNLFYDGRLSDGPEMAAKTKR----PWHNHPKFGTYRFFS 1630
Query: 672 VQMGQEE-ISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV 726
V+ G EE + +G S +NR+EA A +++ F S ++GVI+ Y GQ
Sbjct: 1631 VESGTEENMPGTGHSLVNRSEAQVAVALYNRLIKEF-SSTDFDFKVGVISMYRGQ----- 1684
Query: 727 NYMSRNGALRQQLYKE----IEVASVDSFQGREKDYIILSCVRSN-EHQGIGFLNDPRRL 781
+ A RQ+ +E ++ +VD FQG+EKD IILSCVRS Q +GFL D RR+
Sbjct: 1685 -IVELKRAFRQRFGEEVLSTVDFNTVDGFQGQEKDIIILSCVRSGPSLQTVGFLRDVRRM 1743
Query: 782 NVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLVEG 823
NVALTRA+ + +LGN L + +W ++ + + L++
Sbjct: 1744 NVALTRAKASLFVLGNAPTLERSDDIWRKIVDNARSRTSLIKA 1786
>gi|26338079|dbj|BAC32725.1| unnamed protein product [Mus musculus]
Length = 528
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 244/463 (52%), Gaps = 50/463 (10%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + + +VLV + +NVAVD++
Sbjct: 88 PITVIHGVFGAGKSYLLAVVILFLVELFEKCDSGTVGNARPWKVLVSSSTNVAVDRVLLG 147
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHY-------QVRHLDTSEKSELHKLQQLKDE 505
+ + G K +R+ S ++ PV +LH Q++ L+ K EL ++++
Sbjct: 148 LLSLGFEKFIRV--GSVRKIAKPVLPYSLHAGSDNESEQLKELNALLKEELTPIERV--- 202
Query: 506 QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATE 565
K + K T R + + V+ TC P L + +F V++DE +Q TE
Sbjct: 203 ------YVRKSIEQHKLGTNRVLLKQVRVVGVTCAACAFPCLNDLKFPVVVLDECSQMTE 256
Query: 566 PECLIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQ 623
P L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KP+ L+ Q
Sbjct: 257 PASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPVLLRTQ 316
Query: 624 YRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASG 683
YR HP++S ++ FYEG+L NG I+ER+ S + W +P + FY G E++
Sbjct: 317 YRCHPAISAIANDLFYEGSLVNG--ISERERSPV-LEW-LPT--LCFYNVTGAEQVEREN 370
Query: 684 TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 743
S++N EA K++ + + SGV IGVIT Y+ Q I N +S + K +
Sbjct: 371 -SFVNVAEATFTLKLIQSLMASGVESCMIGVITLYKSQMYKICNLLSAVDVGHPDV-KAV 428
Query: 744 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+V++VD+FQG EK+ ILSCVR+ + +GF++ +R+NVALTR R ++I+G+ L K
Sbjct: 429 QVSTVDAFQGAEKEITILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGSLSCLRK 485
Query: 804 QPLWNGLLTHYK------EHECLVEGPLNNLKQSMVQFQKPKK 840
LW ++ H + +H E L++L + ++ Q +K
Sbjct: 486 NRLWGRVIQHCEGREDGLQHASQCEPQLDHLLKDYLEKQAEEK 528
>gi|440298360|gb|ELP90998.1| suppressor with morphological effect on genitalia family protein
(smg-2), partial [Entamoeba invadens IP1]
Length = 309
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 157/259 (60%), Gaps = 12/259 (4%)
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
V+IDES Q+ EPE ++ ++ VL+GD QL P ++ + + GL +S+FERL+L
Sbjct: 20 VVIDESAQSIEPETFGAMIR-VQKAVLIGDVQQLPPTVLSTEGKKGGLEKSMFERLLLNK 78
Query: 615 LKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQM 674
+ L QYRMHP +++FP+++FY G L NGV+ ++R + P P P+ F
Sbjct: 79 VPYALLTTQYRMHPQIAKFPNDNFYAGKLLNGVSEDDRSDQRLQGILPNPLFPVMFVHCK 138
Query: 675 GQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGA 734
G E SG SY N E V+ ++ F R G+ ++IG+I+PY QR
Sbjct: 139 GDEFYGVSGKSYGNSQEKEVVQYLIDLFNRKGIKDNEIGIISPYSTQR-----------E 187
Query: 735 LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 794
L +K IEVASVD FQG EK++II+SCVRSNE QGIGFL+D RRLNVALTRA+ G+VI
Sbjct: 188 LLGVAHKTIEVASVDGFQGNEKEFIIISCVRSNEQQGIGFLSDHRRLNVALTRAKRGLVI 247
Query: 795 LGNPKVLSKQPLWNGLLTH 813
+G+ L ++ L+ +
Sbjct: 248 VGDAHTLISNQIFRNLMKY 266
>gi|134078610|emb|CAK32628.1| unnamed protein product [Aspergillus niger]
Length = 723
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/469 (32%), Positives = 236/469 (50%), Gaps = 67/469 (14%)
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R I+LI GPPGTGKT T ++ M ++ Q +VLVC PSN++V
Sbjct: 241 PTLNDSQKEAIRFALAAREIALIHGPPGTGKTHTLIELIVQMVQRKQ-RVLVCGPSNISV 299
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + VVR+ +R E ++ E + VR +++ +
Sbjct: 300 DNIVERLAPKKVPVVRIGHPARLLPSVLDHSLEVLTHTSEAAAIVRDVRKEIDQKQASIR 359
Query: 498 KLQQLKDEQG---ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + +L + + + E + +S+ V+ T GAG +L N +F
Sbjct: 360 KTRAARERRAIYDDLRELRREFRERENKCVENLVRESS-VVLATLHGAGGHQLKNQKFDV 418
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA---------------- 598
V+IDE++QA E +C IPL L A +VVL GDH QL P + K
Sbjct: 419 VIIDEASQALEAQCWIPL-LSASKVVLAGDHLQLPPTVKSTKENAKKAAKEKEDKKENGE 477
Query: 599 ---RAGLAQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER 652
L +LF+RL+ + G+K + L QYRMH + +FPS+ Y+ L ++ +R
Sbjct: 478 LLENVSLETTLFDRLLSMHGPGIKRM-LTTQYRMHEKIMQFPSDELYDSKLMAADSVKDR 536
Query: 653 QSSGIDFPWPVP-----NRPMFFYVQMGQE-----------EISASGTSYLNRTEAANVE 696
D P+ V P+ F+ G + + + G S N EA V
Sbjct: 537 LLK--DLPYEVEETDDTKEPLVFWDTQGGDFPEKTEDADLGKKAHLGESKSNDMEALVVS 594
Query: 697 KIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREK 756
+ V + +G+ P I VITPY GQ A + + LR++ Y IE+ SVD FQGREK
Sbjct: 595 RHVDALVDAGIHPEDIAVITPYNGQLAVL------SQMLREK-YPSIELGSVDGFQGREK 647
Query: 757 DYIILSCVRSNEHQGIGFLNDPRRLN--VALTRARYGIVILGNPKVLSK 803
+ +++S VRSN +GFL + RRLN VA+TR + + I G+ + +SK
Sbjct: 648 EAVVVSLVRSNSEHEVGFLGERRRLNALVAMTRPKRHLCICGDSETISK 696
>gi|367021720|ref|XP_003660145.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
gi|347007412|gb|AEO54900.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
Length = 2059
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 163/524 (31%), Positives = 244/524 (46%), Gaps = 96/524 (18%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV--------------YHMAKQGQ 434
+LN Q A+ + + +LIQGPPGTGKT T A+V +++ G
Sbjct: 1320 QLNPGQARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSSNAVPLSRPGA 1379
Query: 435 G--------QVLVCAPSNVAVDQLAEKISA-------TGLKVVRLCAKSREAVSSPVEHL 479
++LVCAPSN AVD+L ++ A T K+ L +A+++ V+ +
Sbjct: 1380 ASANQAPSKKLLVCAPSNAAVDELVLRLKAGVKTMNGTFHKIEVLRLGRSDAINAAVKDV 1439
Query: 480 TLHYQVR-HLDT-------SEKSELHK-LQQLKDEQGELS-------SSD--------EK 515
TL V+ LD+ S++ +LH+ QLK++ EL +SD ++
Sbjct: 1440 TLDELVKARLDSEINNSGPSDREKLHQEAGQLKEKIAELRPQLEAARASDNRAFTMKLQR 1499
Query: 516 KYKALKR----------------------------ATEREISQSADVICCTCVGAGDPRL 547
++ LKR ++EI A V+C T G+G
Sbjct: 1500 EFDELKRRQAHIGAQIDANKNDGNTFAREVEIKRRQIQQEILDKAQVLCATLSGSGHEMF 1559
Query: 548 ANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQS 605
N F V+IDE+ Q E LIPL G + +LVGD QL P ++ + AAR G QS
Sbjct: 1560 KNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQS 1619
Query: 606 LFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP 664
LF R+ K + L +QYRMHP +S FPS FYEG LQ+G + + PW
Sbjct: 1620 LFVRMQKNHAKDVHLLDMQYRMHPEISRFPSQEFYEGLLQDGADMGRLRLQ----PWHES 1675
Query: 665 NR--PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVITPYE 719
P F+ G + S +N E A + + T + +IG+ITPY+
Sbjct: 1676 ELLGPYRFFDVKGSQSRGPKNQSLVNEEELKVAMQLYRRFRTDYGKVELKGKIGIITPYK 1735
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
Q + + + + +EIE + D+FQGRE + II SCVR++ GIGF+ D R
Sbjct: 1736 AQLLRLRQRFTEKYG--EGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIR 1793
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEG 823
R+NV LTRA+ + ILG+ + L + W+ L+ K + G
Sbjct: 1794 RMNVGLTRAKSSLWILGDSRALVQGEFWSKLIEDAKRRDRYTSG 1837
>gi|170089137|ref|XP_001875791.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649051|gb|EDR13293.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1937
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 237/521 (45%), Gaps = 97/521 (18%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQ--------------- 434
+N Q A+ S ++ SLIQGPPGTGKT T +V + Q
Sbjct: 1295 VNEPQAAAIISSMEAEGFSLIQGPPGTGKTSTICGLVARFVSRRQRPSVPIVIGRNAPPA 1354
Query: 435 -----GQVLVCAPSNVAVDQLAEKI------SATG---LKVVRLCA-------------- 466
++L+CAPSN A+D++A ++ S G L+VVR+ A
Sbjct: 1355 EKPSVAKILICAPSNAAIDEIAHRLKGGYSGSIKGQGSLRVVRIGAVQSMNLSVRDISLD 1414
Query: 467 ----KSREAVSSPVEHL-----TLHYQVRHLDTSEKSELHKLQQLKDEQGELSS------ 511
+ + S+P+ + +LH + L + +L L ++D +
Sbjct: 1415 SLVEQKLDYSSTPLAEIGNEIKSLHRDIAALKDLRQQKLQDLVAVRDNSARTKTLESEVQ 1474
Query: 512 ---------------------SDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF 550
SD + L+R +R+I ADV+C T GAG LA
Sbjct: 1475 NLGSKRQDLVTQLNQKKDKLKSDTRSLDTLRRGIQRDILNEADVVCSTLSGAGHDTLAQH 1534
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
F ++IDE+ QA E LIPL + + VLVGD QL P ++ ++A R QSLF RL
Sbjct: 1535 DFEMLIIDEAAQAIELSSLIPLKYNSARCVLVGDPQQLPPTVLSQEACRYSYNQSLFVRL 1594
Query: 611 VLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR--- 666
+ L +QYRMHP +S FPS FYE +Q+G ++E PW +
Sbjct: 1595 QKRCPNAVHLLSIQYRMHPDISRFPSRVFYESKIQDGPRMDEVTKQ----PWHTHVKFGT 1650
Query: 667 PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVITPYEGQRA 723
FF V G EE SG S N E A + + ++ S++GV++ Y Q
Sbjct: 1651 YKFFNVSQGVEE--QSGRSIKNLAECQVAVALYNRLCQEYKAFNFDSRVGVVSMYRAQIV 1708
Query: 724 YIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE-HQGIGFLNDPRRLN 782
+ + + + + I+ +VD FQG+EKD IILSCVRS Q +GFL+D RR+N
Sbjct: 1709 ELRRHFEKRFG--KDIIGRIDFNTVDGFQGQEKDVIILSCVRSGPGLQSVGFLSDVRRMN 1766
Query: 783 VALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLVE 822
VALTRA+ + ILGN L + W ++ + L++
Sbjct: 1767 VALTRAKSSLFILGNAPTLERSNDTWREIVVDARSRLALLQ 1807
>gi|255571556|ref|XP_002526724.1| DNA-binding protein smubp-2, putative [Ricinus communis]
gi|223533913|gb|EEF35638.1| DNA-binding protein smubp-2, putative [Ricinus communis]
Length = 644
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 229/449 (51%), Gaps = 32/449 (7%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ K++ + + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 194 LDHSQKDAISKALSSKDVFLLHGPPGTGKTTTVVEIILQEVKRG-AKILACAASNIAVDN 252
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 502
+ E++ +K+VRL +R + + S ++ L L + E+ KL +
Sbjct: 253 IVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLKGDNSSLANDIRKEMKALNGKLLKT 312
Query: 503 KDE------QGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 313 KDKSTRRDIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGALSHKLDNTSFDL 369
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
V+IDE+ QA E C I L+ G++ +L GDH QL P I +A + GL ++LFERL L
Sbjct: 370 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLY 428
Query: 615 LKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID-FPWPVPNRPMFFY 671
+ L VQYRMH + + S Y ++ +I S ++ P
Sbjct: 429 GDEVTSMLTVQYRMHELIMTWSSKELYNSKIKAHPSIAAHMLSDLEGVKRSSATEPTLLL 488
Query: 672 VQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNY 728
+ + EE S LN EA + +GV S IG+ITPY Q +
Sbjct: 489 IDIAGCDMEEKKDEEESTLNEGEADVAVAHAKRLVENGVQASDIGIITPYAAQVVLLKIL 548
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
S L K++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA
Sbjct: 549 RSNEDKL-----KDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 603
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R ++ + + ++ L+ +++EH
Sbjct: 604 RRQCCLVCDTETVTSDGFLKRLIEYFEEH 632
>gi|19112847|ref|NP_596055.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582870|sp|O94387.1|YGSA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C29A10.10c
gi|4007798|emb|CAA22438.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe]
Length = 1944
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 254/544 (46%), Gaps = 112/544 (20%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMA----------------KQG 433
+N Q +A+ S + +LIQGPPGTGKT T ++ + K
Sbjct: 1271 VNEPQAYAIYASSVNDGFTLIQGPPGTGKTKTILGMIGAVLTSSSQGLQFNVPGQTRKTS 1330
Query: 434 QGQVLVCAPSNVAVDQLAEKISA-----TGLK----VVRL-------------------- 464
+ ++L+CAPSN A+D++ +I A G+K V+R+
Sbjct: 1331 KNKILICAPSNAAIDEILLRIKAGVYDHEGIKFFPKVIRVGFGDSISVHAKEFTLEEQMI 1390
Query: 465 --------------------------CAKSREAVSSPVEHL--------TLHYQVRHLDT 490
K R+++ +E L Q+R + T
Sbjct: 1391 KQMELTNLKKDQEANNSSDTRKKYDSIIKKRDSLREDLEKFRSTGKNSSILEAQLREI-T 1449
Query: 491 SEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLAN- 549
+K + L+Q D+ E S + LK+ + ++ Q AD++C T +G L N
Sbjct: 1450 KQK---NMLEQSLDDMRERQRSTNRNLDVLKKQIQNQLLQEADIVCATLSASGHELLLNA 1506
Query: 550 -FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
FR V+IDE+ QA E +IPL G + V+VGD QL P ++ K +A+ G +QSL+
Sbjct: 1507 GLTFRTVIIDEAAQAVELSSIIPLKYGCESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYV 1566
Query: 609 RLVLL-GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW---PVP 664
R+ L +QYRM+P +S FPS FY L +G ++ S PW P
Sbjct: 1567 RMFKQHNESACLLSIQYRMNPEISRFPSKFFYNSKLLDGPNMSAVTSR----PWHEDPQL 1622
Query: 665 NRPMFFYVQMGQEEISASGTSYLNRTEAANV----EKIVTTFLRSGVVPSQIGVITPYEG 720
FF V G E S S + Y N EA+ + E+++ +L +IGV+TPY
Sbjct: 1623 GIYRFFNVH-GTEAFSNSKSLY-NVEEASFILLLYERLIQCYLNIDF-EGKIGVVTPYRS 1679
Query: 721 QRAYIVNYMSRN-GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
Q + + R G++ ++K +++ +VD FQG+EKD II SCVRS+ GIGFL D R
Sbjct: 1680 QVQQLRSQFQRKYGSI---IFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLR 1736
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK 839
RLNVALTRA+ + I+GN K L ++ ++ L+ K G +L S QF+ K
Sbjct: 1737 RLNVALTRAKSSLYIVGNSKPLMQEDIFYSLIEDAK-----TRGVWRDL--SANQFKNSK 1789
Query: 840 KIYN 843
I N
Sbjct: 1790 SISN 1793
>gi|358393396|gb|EHK42797.1| hypothetical protein TRIATDRAFT_86336 [Trichoderma atroviride IMI
206040]
Length = 2056
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 173/596 (29%), Positives = 269/596 (45%), Gaps = 113/596 (18%)
Query: 347 MKTFAVDETSVSGYIYHHLLGHEVEVQ---MVRNTLPRRFGAPGLPELNASQVFAVKSVL 403
M T + ++ Y+ L+ ++ + ++R R G LN Q AV
Sbjct: 1285 MATIEREYAALESLQYYDLMDEILKAEPSPILRYGEERVSNYMGNWALNQGQALAVLGAQ 1344
Query: 404 QRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQV------------------------- 437
+ +LIQGPPGTGKT T A+V + + Q+
Sbjct: 1345 ENDGFTLIQGPPGTGKTKTIVAMVGALLSEQLAQIPAAATGVPLGVPMRPNGAPGGNQAR 1404
Query: 438 ----LVCAPSNVAVDQLAEKIS---------ATGLKVVRLCAKSREAVSSPVEHLTLHYQ 484
LVCAPSN AVD+L ++ A + V+RL EA+++ V+ +TL
Sbjct: 1405 PKKLLVCAPSNAAVDELVLRLKSGIKTTSGKARNINVLRLGRS--EAINAAVKDVTLDEL 1462
Query: 485 VRHL---DTS------EKSELH--------KLQQLKDEQGELSSSDEK--------KYKA 519
V+ DT+ ++ +LH +L QL+ E ++D++ ++
Sbjct: 1463 VKKRLEGDTTKDKAKADRDKLHEEAAEVKEQLAQLRPRLEESRNNDDRALHNSLSRQFDD 1522
Query: 520 LKRA----------------------------TEREISQSADVICCTCVGAGDPRLANF- 550
LKR ++EI SA V+C T G+G N
Sbjct: 1523 LKRKQMQIGKQIDANKDSGNSIAREMELRRRQIQQEILNSAHVLCATLSGSGHEMFRNLD 1582
Query: 551 -RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F V+IDE+ Q E LIPL G + +LVGD QL P ++ + AAR G QSLF R
Sbjct: 1583 VEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVR 1642
Query: 610 LVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN--R 666
+ K + L +QYRMHP +S FPS FYE L +G + + + + PW
Sbjct: 1643 MQQNHPKSVHLLDMQYRMHPEISHFPSREFYESQLHDGQDMLQLRQA----PWHKDTLFA 1698
Query: 667 PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF---LRSGVVPSQIGVITPYEGQRA 723
P F+ G +E G S +N E ++ F R + +IG+ITPY+ Q
Sbjct: 1699 PYRFFDVEGVQERGRKGQSLVNTRELEVALQLYERFSREYRDIDLTRKIGIITPYKAQLY 1758
Query: 724 YIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 782
+ + + +R G + + IE + D+FQGRE + II SCVR++ GIGF+ D RR+N
Sbjct: 1759 ELRSRFQARYG---ENITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMN 1815
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKP 838
V LTRA+ + ILG+ + L + W L+ +E + +G + ++ + ++ KP
Sbjct: 1816 VGLTRAKSSLWILGDSRALVQGEFWRKLIVDAQERDRYTKGDILSMFRRPLERAKP 1871
>gi|57640113|ref|YP_182591.1| UvrD/REP family DNA helicase [Thermococcus kodakarensis KOD1]
gi|57158437|dbj|BAD84367.1| DNA helicase, UvrD/REP family [Thermococcus kodakarensis KOD1]
Length = 661
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 238/496 (47%), Gaps = 80/496 (16%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LNASQ A+ L L+ GP GTGKT T ++ +G +VL A SNVAVD
Sbjct: 176 LNASQRGAIAKALGSGDFFLVHGPFGTGKTRTLVELIRQEVARGH-KVLATAESNVAVDN 234
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDT-SEKSEL----HKLQQLKD 504
+ E+++ +GLKVVR+ SR VS + TL Y + D +E EL L++ +D
Sbjct: 235 IVERLADSGLKVVRIGHPSR--VSKALHETTLAYLITQHDLYAELRELRVIGENLKEKRD 292
Query: 505 ----------------------EQG------------------ELSSSDEKKY---KALK 521
E+G ++ +K + + L+
Sbjct: 293 TFTKPAPKYRRGLSDREILRLAEKGIGTRGVPARLIREMAEWIRINQQVQKTFDDARKLE 352
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
REI Q ADV+ T AG + + +IDE+TQAT P LIP + AK+ VL
Sbjct: 353 ERIAREIIQEADVVLTTNASAGLEVVDYGEYDVAVIDEATQATIPSVLIP-INRAKRFVL 411
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNSFYE 640
GDH QL P I+ +KA L+++LFE L+ K L VQYRM+ L EFPS FY+
Sbjct: 412 AGDHKQLPPTILSEKAKE--LSKTLFEGLIERYPEKSEMLTVQYRMNERLMEFPSREFYD 469
Query: 641 GTLQ-----NGVTINERQSSGIDFP--WPVPNRP--MFFYVQMGQEEIS-----ASGTSY 686
G ++ +T+ + S +F W +P + ++ + E S
Sbjct: 470 GKIKAHESVKNITLADLGVSEPEFGNFWDEALKPENVLVFIDTSKREDRFERQRRGSDSR 529
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EA V + V L GV P IGVITPY+ QR I + + ++IEV
Sbjct: 530 ENPLEAKLVTETVEKLLEMGVKPDWIGVITPYDDQRDLISSMVG----------EDIEVK 579
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD +QGREK+ I+LS VRSN +GFL D RRLNV+LTRA+ ++ +G+ LS P
Sbjct: 580 TVDGYQGREKEIIVLSFVRSNRRGELGFLTDLRRLNVSLTRAKRKLIAVGDSSTLSNHPT 639
Query: 807 WNGLLTHYKEHECLVE 822
+ + +E +E
Sbjct: 640 YRRFIEFVRERGTFIE 655
>gi|308809071|ref|XP_003081845.1| DNA-binding protein, putative (ISS) [Ostreococcus tauri]
gi|116060312|emb|CAL55648.1| DNA-binding protein, putative (ISS) [Ostreococcus tauri]
Length = 781
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 247/485 (50%), Gaps = 72/485 (14%)
Query: 394 SQVFAVK--SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLA 451
SQ+ A++ S + P+ +QGPPGTGKT ++ +G+ +VL CAPSN+AVD L
Sbjct: 282 SQILALRAASTKKYPVVCVQGPPGTGKTAVVIEMIAQACARGE-RVLACAPSNLAVDNLV 340
Query: 452 EKISAT-GLKVVRLCAKSR---EAVSSPV-----EHLTLHYQVRHLDTSEKS----ELHK 498
E++ ++ VR A R A+S + E ++Q + +D+SE S EL +
Sbjct: 341 ERLDGIDAVRAVRFGAPERISAAALSCSIDAKVAEATEAYFQKQRVDSSETSATLRELME 400
Query: 499 LQQ--------LKDE-QGELSSSDEKKYKAL-------KRATEREISQSADVICCTCVGA 542
Q +K++ QGE+ ++ ++K K++ ++A + +I + A+V+ T GA
Sbjct: 401 RYQKATNVPSAVKEKLQGEIEAT-KRKLKSIVGGGTKHRKAAQTKIVREANVVLTTNAGA 459
Query: 543 GDPRLANFR-FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG 601
G L F V+IDE+ QA+EP IPLV G K+ +L+GD CQL PVI+ ++A AG
Sbjct: 460 GLDALQTLPPFDLVVIDEAAQASEPLSWIPLVRG-KRAILIGDPCQLAPVILSREAIEAG 518
Query: 602 LAQSLFERL-----------------VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
LA+SL RL V G+ + L QYR H ++S + S Y G L+
Sbjct: 519 LARSLMSRLMPSAETLPLRDDESSARVSDGILTLTLSTQYRSHEAISSWSSKEAYAGRLR 578
Query: 645 NGVTINERQSSGIDFP----WPVPNRPMFFYVQMG-QEEISAS------GTSYLNRTEAA 693
++ R + D P + PM Q I + G SY+N EA
Sbjct: 579 AADSV--RGALLRDLPGVQDTVLTRTPMLMITTRSPQGRIPSEYSERRVGGSYINEGEAK 636
Query: 694 NVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKE---IEVASVDS 750
V L++GV I VI+PY Q V + A+ + + + ++V+SVDS
Sbjct: 637 TAMAHVKMLLKAGVRAKDIVVISPYAAQ----VRLLRSMIAVTLEDFADDRVVDVSSVDS 692
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
FQGRE + +I+S VRSN +GFL+D RR+NVA+TR + + I+G+ + + L
Sbjct: 693 FQGREAECVIISTVRSNGAGRVGFLSDSRRMNVAVTRGKRQVAIIGDDQTIKSDDFLRRL 752
Query: 811 LTHYK 815
+ H +
Sbjct: 753 VHHIE 757
>gi|328862576|gb|EGG11677.1| hypothetical protein MELLADRAFT_33290 [Melampsora larici-populina
98AG31]
Length = 349
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 180/346 (52%), Gaps = 33/346 (9%)
Query: 496 LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLAN--FRFR 553
+H+L Q DE + ++ ++ A R +I Q ADVIC T G+G ++ F F
Sbjct: 1 MHELSQQLDEARDQQAASKRYLDAATRKLRMQILQDADVICSTLSGSGHDYMSQLPFDFE 60
Query: 554 QVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
V+IDE+ Q TEP LIPL A Q +LVGD QL P ++ + A++AG QSLF R+
Sbjct: 61 TVVIDEACQCTEPASLIPLRYNATQCILVGDPLQLPPTVLSQAASKAGYDQSLFVRMQRF 120
Query: 614 GLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR---PMF 669
+ L +QYRMHP++S FPS +FY+ L +G + R + W + P
Sbjct: 121 APTAVHLLSIQYRMHPAISAFPSKAFYDSRLMDGPDMASRTTQ----RWHTEDTFFPPYT 176
Query: 670 FYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG---VVPSQIGVITPYEGQRAYIV 726
FY +G E S++NRTEA I + R+ ++G+IT Y GQ
Sbjct: 177 FYHPIGAREERGRHHSFINRTEAGMTVAIYSRLTRTFPDIDFAYRVGIITAYAGQ----- 231
Query: 727 NYMSRNGALRQQLYKE--------IEVASVDSFQGREKDYIILSCVR--SNEHQGIGFLN 776
G +R+Q + +++ +VD FQG+EKD IILSCVR ++ GIGFL
Sbjct: 232 -----VGEIRRQFRQSFPADVVSTLDINTVDGFQGQEKDIIILSCVRGGKDDDNGIGFLK 286
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVE 822
D RR+NVALTRA+ + ++GN L + W L+ +E E
Sbjct: 287 DTRRMNVALTRAKSSLFVIGNQSALVQDKNWKALIDDARERGTFSE 332
>gi|224090282|ref|XP_002308965.1| predicted protein [Populus trichocarpa]
gi|222854941|gb|EEE92488.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 229/449 (51%), Gaps = 32/449 (7%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ K++ + + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 197 LDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 502
+ E++ +K+VRL +R + + S ++ L L + E+ KL +
Sbjct: 256 IVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSALANDIRKEMKALNGKLLKT 315
Query: 503 KDE------QGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L F
Sbjct: 316 KDKSTRRDIQKELRTLSKEERKRQQLAVI---DVIKNADVVLTTLTGAFSHKLNTTSFDL 372
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
V+IDE+ QA E C + L+ G++ +L GDH QL P I +A + GL ++LFERL L
Sbjct: 373 VIIDEAAQALEITCWLALLKGSR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFERLTDLY 431
Query: 615 LKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID-FPWPVPNRPMFFY 671
+ L VQYRMH + + S Y ++ ++ ++ P
Sbjct: 432 GDEVTSMLTVQYRMHELIMNWSSKELYNSKIKAHPSVAAHMLFDLEGVKRSSSTEPTLLL 491
Query: 672 VQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNY 728
V + EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 492 VDIAGCDMEEKKDEEDSTMNEGEAEVAVAHAKRLVQSGVQASDIGIITPYAAQVVLLRIL 551
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
+ + L K++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA
Sbjct: 552 KNNDDKL-----KDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRA 606
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R ++ + + +S L+ H++EH
Sbjct: 607 RRQCCLVCDTETVSGDGFLKRLIEHFEEH 635
>gi|349579545|dbj|GAA24707.1| K7_Hcs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 683
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 176/566 (31%), Positives = 283/566 (50%), Gaps = 65/566 (11%)
Query: 288 SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKST---SFDRMQ 344
S D+ + G V K+ + ++ + L SQ V + +S ++ K+T +++RM+
Sbjct: 105 SEDSNGEQAECSGVVYKM-SDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRME 163
Query: 345 GAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL-PELNASQVFAVKSVL 403
M+ + + + I +L+ E + NT + L P LN SQ A+ +
Sbjct: 164 STMRKLSEISSPIQDKIIQYLVN---ERPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAI 220
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHM-AKQGQGQVLVCAPSNVAVDQLAEKIS--ATGLK 460
+++I GPPGTGKT T ++ + K + ++L+C PSN++VD + E+++
Sbjct: 221 NNDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL 280
Query: 461 VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ----LKDEQGELSSSDEKK 516
++R+ +R S+ L + + + E+ KL Q LK+ + + +E K
Sbjct: 281 LLRIGHPARLLDSNKRHSLDILSKKNTIVKDISQEIDKLIQENKKLKNYKQRKENWNEIK 340
Query: 517 Y--KALKR---ATEREISQSADVICCTCVGAGDPRLA-------NFR-FRQVLIDESTQA 563
K LK+ T +++ + ++ T G+ L NF+ F ++IDE +QA
Sbjct: 341 LLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQA 400
Query: 564 TEPECLIPLVLGAKQ---VVLVGDHCQLGPVIMCK--KAARAGLAQSLFERLVLLGLKPI 618
EP+C IPL+ Q +VL GD+ QL P I + K L +LF+R++ + P
Sbjct: 401 MEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIFPK 458
Query: 619 R-----LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNR----- 666
R L VQYRM+ + EFPS+S Y G L T+ R ID P P+
Sbjct: 459 RDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDDDT 516
Query: 667 --PMFFYVQMGQE------EISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITP 717
P+ +Y G E E + G+ Y N E A V++ + LRS VP + IGVI+P
Sbjct: 517 KIPLIWYDTQGDEFQETADEATILGSKY-NEDEIAIVKEHIEN-LRSFNVPENSIGVISP 574
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q +++ + L +IE+++VD FQGREKD IILS VRSNE +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 778 PRRLNVALTRARYGIVILGNPKVLSK 803
RRLNVA+TR R +V++GN +VL +
Sbjct: 630 ERRLNVAMTRPRRQLVVVGNIEVLQR 655
>gi|255729912|ref|XP_002549881.1| hypothetical protein CTRG_04178 [Candida tropicalis MYA-3404]
gi|240132950|gb|EER32507.1| hypothetical protein CTRG_04178 [Candida tropicalis MYA-3404]
Length = 705
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/444 (33%), Positives = 243/444 (54%), Gaps = 45/444 (10%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A+ + + I++I GPPGTGKT T ++ + +VLVC PSN++VD
Sbjct: 238 LNDSQKEAIDFAINKSNITIIHGPPGTGKTYTLIELIQQLTNNLGEKVLVCGPSNISVDT 297
Query: 450 LAEKISATGLK---VVRLCAKSREA---VSSPVEHLTLHY---QVRHLDTSEKSELHKLQ 500
+ E++ K ++R+ +R ++ +E L+ Y ++ ++ +S L +++
Sbjct: 298 ILERLHDKYKKPEKLIRMGHPARLLPGNLAHSLEILSKSYGHDVIKDIEKDIQSTLSQIK 357
Query: 501 QLKD--EQGELSSSDEKKYKALKRATER---EISQSADVICCTCVGAGDPRLANFRFRQV 555
+ K E+ L + K LK+ ++ E+ Q + V+ T GAG L F +
Sbjct: 358 KCKRYAERKALYQELKLLRKELKQREKKIVAELLQQSQVVISTLHGAGSFDLKGVSFDTI 417
Query: 556 LIDESTQATEPECLIPLVLGA--KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
+IDE +Q+ EP+C IPL+L + K++V+ GD+ QL P I CKK + L +LF+RLV
Sbjct: 418 IIDEVSQSLEPQCWIPLLLTSNFKRLVIAGDNMQLPPTIKCKKN-ESFLGTTLFDRLVKQ 476
Query: 614 ----GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN---- 665
+ + L VQYRM+ S+ EFPS Y+ L ++ + S +D P N
Sbjct: 477 CDGDSFRKL-LNVQYRMNQSIMEFPSMQLYDNKLLCDSSV--KDISLLDLPGVEDNETTS 533
Query: 666 -RPMFFYVQMGQ--EEISAS---GTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
+ +++ Q G+ E+I+ S G S N E V+ + L SGV P IG+I+PY
Sbjct: 534 AKCIWYDTQGGEFPEQINESIEGGDSKYNEMEILVVQGHLQKLLDSGVRPQDIGIISPYA 593
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
Q L++++ E+EV +VD FQGREK+ IILS VRSN+ + IGFL++ R
Sbjct: 594 AQVQL----------LKKKVVPEVEVHTVDGFQGREKEVIILSLVRSNDDREIGFLSEQR 643
Query: 780 RLNVALTRARYGIVILGNPKVLSK 803
RLNVA+TR + + I+G+ ++L++
Sbjct: 644 RLNVAITRPKRHLCIVGDLELLNQ 667
>gi|149241697|ref|XP_001526342.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450465|gb|EDK44721.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 2053
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 158/515 (30%), Positives = 243/515 (47%), Gaps = 109/515 (21%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQ-------------- 434
++N SQ A+K + LIQGPPGTGKT T IV + +
Sbjct: 1349 DVNKSQARAIKGTYESDGFFLIQGPPGTGKTKTILGIVGYALSHKESDKIIELPQKPAAK 1408
Query: 435 ----GQVLVCAPSNVAVDQLAEKI---------SATGLKVVRLCAKSREAVSSPVEHLTL 481
G++L+CAPSN AVD+L ++ LKVVRL +A+++ V LTL
Sbjct: 1409 PSKGGKILICAPSNAAVDELVLRLRNGVKNSKGEHMDLKVVRLGRS--DAINAAVRDLTL 1466
Query: 482 HYQV--------------------------------------RHLDTSEKSELH-KLQQL 502
V L + E +L +L+++
Sbjct: 1467 EELVDKELQSKQQEDVIIDPGIRAEHTKKVKERDQIKTRLSTESLSSKEIDKLETRLREV 1526
Query: 503 KDEQGELSSS-DEKKYKAL---------KRATEREISQSADVICCTCVGAGDPRLANF-- 550
E+ +L+ DE++ +A +R + +I A V+C T G+ +++
Sbjct: 1527 NKERSDLAKKLDEQRERASIAYRSREIGRRTIQTKILDDAQVLCATLSGSAHELISSLSV 1586
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
+F QV+IDE+ Q E +IPL G ++ ++VGD QL P ++ + A+ QSLF R+
Sbjct: 1587 KFDQVIIDEACQCLELSAIIPLRYGCRKCIMVGDPNQLPPTVLSQAASSFNYEQSLFVRM 1646
Query: 611 -------VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW-- 661
V L L VQYRMHP +S+FPS FY+ L++G + E+ PW
Sbjct: 1647 QTNYPDSVYL------LNVQYRMHPQISQFPSAEFYQSKLKDGPNMEEKNKR----PWHS 1696
Query: 662 PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ-----IGVIT 716
P P F+ + + S N EA ++V + ++P Q +G+I+
Sbjct: 1697 IKPLSPYRFFDIASRHTKNELTRSLFNLEEARICLQLVQKLI--TLIPQQAFAGKVGIIS 1754
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
PY+ Q I + R + + EI+ +VD FQG+EK+ II+SCVR++ +GFL+
Sbjct: 1755 PYKEQIRTIKDVFVREYG--KIILNEIDFNTVDGFQGQEKEIIIMSCVRASADGNVGFLS 1812
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 811
D RR+NVALTRAR + ILGN + L + +WN LL
Sbjct: 1813 DVRRMNVALTRARTTLWILGNRESLLRNKVWNRLL 1847
>gi|392566307|gb|EIW59483.1| hypothetical protein TRAVEDRAFT_71533 [Trametes versicolor FP-101664
SS1]
Length = 1937
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 248/526 (47%), Gaps = 110/526 (20%)
Query: 389 PELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIV-YHMAKQGQ------------- 434
P+ NA +KS+ +LIQGPPGTGKT T +V ++A++ +
Sbjct: 1289 PQANA----IIKSLATEGFALIQGPPGTGKTSTICGLVQLYLARRPKTSSVIHPGRPAER 1344
Query: 435 ---GQVLVCAPSNVAVDQLA----EKISATGL-----KVVRLCA---------------- 466
++L+CAPSN A+D++A E +S G KVVR+ A
Sbjct: 1345 ELPKKILLCAPSNAAIDEIAFRLKEGVSGAGHRAEHPKVVRIGALKSMNLSVRDVSMEYL 1404
Query: 467 ------------KSREA------VSSPVEHLTLHYQ----------------------VR 486
++EA V S +E + Q V+
Sbjct: 1405 IDQKLNSDPGLKNTKEAGTELSRVRSELEAVKRQRQEKIEELATIQDNASKTLALEEDVK 1464
Query: 487 HLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPR 546
L+ + H+L ++KD+Q SD + A +R E+ Q ADVIC T +
Sbjct: 1465 RLNRQKAMLTHQLDKVKDKQ----KSDYRTLDATRRRFRNEVLQEADVICSTLSASAYEY 1520
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
L +F F V+IDE+ QA E LIP+ + ++VGD QL P + ++A + G QSL
Sbjct: 1521 LESFDFELVIIDEAAQAIELSSLIPMKYRCRTCIMVGDPQQLPPTVKSQEACKLGYDQSL 1580
Query: 607 FERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW---P 662
F RL + + L +QYRMHP +S+ PSN FY G L +G + E+ W P
Sbjct: 1581 FVRLQRSQPEAVHLLSIQYRMHPDISQLPSNLFYGGRLLDGPDMAEKTKRA----WQTHP 1636
Query: 663 VPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPY 718
FF VQ G EE S +G S +NR EA A ++ F S + ++GVI+ Y
Sbjct: 1637 KFGTYRFFNVQAGVEE-SGAGHSLVNRAEAQVAVALYNRLCKEF-SSANMDFKVGVISMY 1694
Query: 719 EGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEH-QGIGFLN 776
GQ + + R G +++ ++ +VD FQG+EKD IILSCVR+ Q +GFL
Sbjct: 1695 RGQILELRRAFQQRFG---EEVLSMVDFNTVDGFQGQEKDIIILSCVRAGPGVQTVGFLR 1751
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLV 821
D RR+NVALTRA+ + +LGN L + W ++ + + LV
Sbjct: 1752 DVRRMNVALTRAKASLFVLGNAPTLERSDETWRKIVENARSRSSLV 1797
>gi|336463474|gb|EGO51714.1| hypothetical protein NEUTE1DRAFT_70677 [Neurospora tetrasperma FGSC
2508]
Length = 2064
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 204/718 (28%), Positives = 298/718 (41%), Gaps = 166/718 (23%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV--------------YHMAKQGQG 435
LN Q A+ + + +LIQGPPGTGKT T A+V + + G G
Sbjct: 1314 LNPGQAKAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPSAGVAIGRPGLG 1373
Query: 436 ---------QVLVCAPSNVAVDQLAEKI---------SATGLKVVRLCAKSREAVSSPVE 477
++LVCAPSN AVD+L ++ + ++VVRL +A++S V+
Sbjct: 1374 AAKNNAPAKKLLVCAPSNAAVDELVLRLKNGVKTQNGTTHQIEVVRLG--RSDAINSAVK 1431
Query: 478 HLTLHYQVR-----HLDTSE----KSELHK------------------------------ 498
+TL V+ L+ E + +LH+
Sbjct: 1432 DVTLDELVKAKLEAQLNKDEGPTDREKLHQEAGEIKQKIAELRPQLEAARTIDDRQLVNK 1491
Query: 499 ----LQQLKDEQGELSS---SDEKKYKALKRATE-------REISQSADVICCTCVGAGD 544
+LK Q + + +D+ R TE +EI A V+C T G+G
Sbjct: 1492 YQREFDELKRRQAHIGARIDADKASGNTFARETEIKRRQVQQEILDKAQVLCATLSGSGH 1551
Query: 545 PRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
N F V+IDE+ Q E LIPL G + +LVGD QL P ++ + AAR G
Sbjct: 1552 EMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGY 1611
Query: 603 AQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
QSLF R+ K + L QYRMHP +S FP +FYEG LQ+G + + + PW
Sbjct: 1612 DQSLFVRMQKNHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDGDDMAKSRLQ----PW 1667
Query: 662 PVPNR--PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF---LRSGVVPSQIGVIT 716
P F+ G +E S +N E ++ F + + +IG+IT
Sbjct: 1668 HRSTLLGPYRFFDVRGSQERGPKNQSLVNEEELKVAMQLYRRFKADYGNVDLKGKIGIIT 1727
Query: 717 PYEGQRAYI-VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+ Q + + R G + EIE + D+FQGRE + II SCVR++ GIGF+
Sbjct: 1728 PYKAQLYRLRSQFAQRFG---DTITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFM 1784
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGP-LNNLKQSMVQ 834
D RR+NV LTRAR + ILG+ + L + W L+ K + G + L Q+ Q
Sbjct: 1785 TDIRRMNVGLTRARSSLWILGDSRALMQGEFWAKLIEDSKRRDRYTTGNIMGMLSQAGPQ 1844
Query: 835 FQ----KPKKIYNDRRLFFGAGPGIVPNDISTSNPNAD-RRGSRA--RGYMPPG------ 881
+ I + GI + + ++D + G R+ RG PP
Sbjct: 1845 LSAAAFEALAITSTDNTRESTPSGIKREVVEVKDEDSDVQMGDRSSFRGSSPPAAAVGGS 1904
Query: 882 -------PPNGTHKPG------------------LHPAGFPM-------PRVPLPPFQGG 909
PP+G + P + G P+ PRV P++GG
Sbjct: 1905 SAMGSSRPPSGRNTPSHTGNGFGSSPAPQQPQPTQYREGLPVIQETTFTPRVKKRPYEGG 1964
Query: 910 PPSQPYAIPSRGAVHGPVGAVHHVPPPGSRGFGAGRGSAGAPIGSHLQHQQNTQQPIG 967
QP G H+ P SR A +G G + + HQQ Q P G
Sbjct: 1965 GGDQP-------------GKKQHIDPIASR---APKGPRGYNLPPYPAHQQQRQPPAG 2006
>gi|315045920|ref|XP_003172335.1| DNA-binding protein SMUBP-2 [Arthroderma gypseum CBS 118893]
gi|311342721|gb|EFR01924.1| DNA-binding protein SMUBP-2 [Arthroderma gypseum CBS 118893]
Length = 717
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 229/469 (48%), Gaps = 69/469 (14%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A++ L R I+LI GPPGTGKT T ++ + Q + +VLVC PSN++VD
Sbjct: 230 LNGSQKEAIRFALASREIALIHGPPGTGKTHTLIELIRQLV-QRKKRVLVCGPSNISVDN 288
Query: 450 LAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKL 499
+ E++++ + +VR+ +R E +S E + VR +++ + K
Sbjct: 289 IVERLASQKVSLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDLKQASIRKT 348
Query: 500 QQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLI 557
+ ++ + E K+++ + I + V+ T GAG +L N +F V+I
Sbjct: 349 RNGRERRAIYGDLRELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVII 408
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG---------------- 601
DE++QA E +C IPL L A +V+L GDH QL P I + +++ G
Sbjct: 409 DEASQAREAQCWIPL-LSASKVILAGDHLQLPPTIKSRSSSKPGQNNSALWDKEDLDLTE 467
Query: 602 ---------LAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTIN 650
L +LF+RL+ L I+ L QYRMH + +FPS YE L +
Sbjct: 468 LSNKFDMRNLEITLFDRLLSLHGTAIKRMLTTQYRMHQKIMDFPSGELYESKLIAADAVR 527
Query: 651 ERQSSGIDFPWPVPN-----RPMFFYVQMGQE-------EISASGTSYL-----NRTEAA 693
ER D P+ + + P+ FY G + S S S L N EA
Sbjct: 528 ERLLK--DLPYEIEDIDDTIEPLVFYDTQGGDFLEKSPDSTSISAKSLLVESKCNDMEAE 585
Query: 694 NVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQG 753
V + V + +GV P I VITPY Q A + + +Q + +E+ SVD FQG
Sbjct: 586 VVARHVENLVSAGVRPEDIAVITPYNAQVALLSQLL-------KQKFPTLELGSVDGFQG 638
Query: 754 REKDYIILSCVRSNEHQGIGFLNDPRRLN-VALTRARYGIVILGNPKVL 801
REK+ +++S VRSN +GFL + RRLN VA+TR R + I G+ + +
Sbjct: 639 REKEAVVVSLVRSNSDHEVGFLGEKRRLNAVAMTRPRRHLCICGDSETV 687
>gi|354501487|ref|XP_003512822.1| PREDICTED: hypothetical protein LOC100755417 [Cricetulus griseus]
Length = 1856
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 226/432 (52%), Gaps = 38/432 (8%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + ++L+ + +NVAVD++
Sbjct: 1402 PITVIHGVFGAGKSYLLAVVILFFVQLFEKCDAGTVGNVRPWKLLISSSTNVAVDRVLLG 1461
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ G K +R+ S + P+ L Y + +E +L +LQ L E EL+
Sbjct: 1462 LLCLGFEKFIRV--GSVRKIDKPI----LPYSLHAGSDNESEQLKELQALMKE--ELTPI 1513
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T R + + V+ TC P + + +F V++DE +Q TEP
Sbjct: 1514 ERVYVRKSIEQHKLGTNRALLKQVRVVGITCAACPFPCMNDLKFPVVVLDECSQMTEPAS 1573
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ +++++LVGD QL P I AA GL Q+LF+RL L+G KP+ L+ QYR
Sbjct: 1574 LLPIARFESEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPVVLRTQYRC 1633
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP +S ++ FYEG L NG++ ER P + FY G E++ S+
Sbjct: 1634 HPVISAIANDLFYEGNLMNGISETERSPVVEWLP------TLCFYNVTGAEQVEREN-SF 1686
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EAA K++ + + SG+ S IGVIT Y+ Q I + +S K ++V+
Sbjct: 1687 QNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQMYKICHLLSAMD-FNHPEAKAVQVS 1745
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR+R ++I+G+ L K L
Sbjct: 1746 TVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRSRRHLLIVGSLSCLRKNRL 1802
Query: 807 WNGLLTHYKEHE 818
W ++ H + E
Sbjct: 1803 WERVIQHCEGRE 1814
>gi|342890168|gb|EGU89032.1| hypothetical protein FOXB_00444 [Fusarium oxysporum Fo5176]
Length = 1016
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 178/587 (30%), Positives = 269/587 (45%), Gaps = 87/587 (14%)
Query: 288 SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGF----------SVDF---V 334
+GD A Q G K ++ LE + ++GV ++ G+ V F V
Sbjct: 417 TGDIVLVAEQPAGSAKKREVKD---LEKKGARGVVTRVSRGWVAVAIDEGKEEVGFSGRV 473
Query: 335 W-----KSTSFDRMQGAMKTF-AVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
W ++ RM AM+ + E+ SG+I +L V L + L
Sbjct: 474 WAVKLADEVTYKRMNWAMEKLNKMKESEYSGFI--RVLFGLSSPSPVAEDLSKDENVGDL 531
Query: 389 ----PELNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 443
P LN SQ A++ ++L R ++LI GPPGTGKT T ++ M K GQ ++LVC PS
Sbjct: 532 EWFDPTLNDSQKNAIRFALLSREVALIHGPPGTGKTHTLIELILQMTKLGQ-RILVCGPS 590
Query: 444 NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEH-LTLHYQVRHLDTSEKSELHKLQQL 502
N++VD + E+++ + ++RL +R + S V+H L + Q K ++
Sbjct: 591 NISVDNIVERLAPHKIPILRLGHPAR-LLPSVVDHSLDVLTQTSEAGAIVKDIRTEMDTK 649
Query: 503 KDEQGELSSSDEKK--YKALKRATEREISQS----------ADVICCTCVGAGDPRLANF 550
+ + S E+K Y LK + + + V+ T GAG +L N
Sbjct: 650 QASIKKTKSGKERKAIYTDLKELRKEFRERERRCVSTLIGGSKVLLATLHGAGGYQLRND 709
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAG--------- 601
F V+IDE++QA E +C +PLV AK+VV GDH QL P I A
Sbjct: 710 EFDVVIIDEASQALEAQCWVPLV-SAKKVVCAGDHLQLPPTIKSSNAKVKAPVKDGAAVT 768
Query: 602 ----LAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS 655
L +LF+RL+ L I+ L QYRMH S+ FPS+ Y+ L + R
Sbjct: 769 KGTTLEITLFDRLLALHGPSIKRMLTTQYRMHESIMRFPSDELYDSKLIAADAVKHRLLK 828
Query: 656 GIDFPW---PVPNRPMFFYVQMG------QEEISAS----------GTSYLNRTEAANVE 696
+++ N P+ F G EE G S N EAA V+
Sbjct: 829 DLEYEVQDNEDTNEPVIFIDTQGGDFPEKNEEDDKDTPRKGRAGLHGDSKSNEMEAALVQ 888
Query: 697 KIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREK 756
+ V + +GV P I V+TPY Q A + + + IE+ SVD FQGREK
Sbjct: 889 QHVRQLVGAGVRPEDIAVVTPYNAQLAILAPLKDK--------FPGIELGSVDGFQGREK 940
Query: 757 DYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+ +I+S VRSN +GFL + RRLNVA+TR + + ++G+ + + +
Sbjct: 941 EAVIVSLVRSNSEGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVQR 987
>gi|363754976|ref|XP_003647703.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
gi|356891739|gb|AET40886.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
Length = 2019
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 188/625 (30%), Positives = 283/625 (45%), Gaps = 128/625 (20%)
Query: 303 IKLTAQEEVALELRASQGVPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIY 362
IK E + L LR + H FS ++ + M T + TS+ G Y
Sbjct: 1225 IKNAKGENMDLTLRIHRS------HRFSNFLTLRTEIYAVKAMQMTTVEREYTSLQGLPY 1278
Query: 363 HHLLGHEVEVQMVRNTLPRRFGAPGLP---ELNASQVFAVKSVLQRP-ISLIQGPPGTGK 418
+ L+ + + + +LN SQ AV S ++ SLIQGPPGTGK
Sbjct: 1279 YDLVSQIITAKPTEEQHAEDAEVEKVKINYKLNTSQATAVVSTVKNLGFSLIQGPPGTGK 1338
Query: 419 TVTSAAIV-YHMAK------------------------QGQGQVLVCAPSNVAVDQLAEK 453
T T IV Y ++ Q Q +VL+CAPSN AVD+L +
Sbjct: 1339 TKTILGIVGYFLSTIRVSPSNVIKNPTQVGNISTEQLLQKQ-KVLICAPSNAAVDELVLR 1397
Query: 454 ISATGL----------KVVRLCAKSREAVSSPVEHLTLHYQVRH---------------- 487
+ GL K+VR+ +AV++ ++ LTL V
Sbjct: 1398 LRE-GLTNFEGKHFKPKLVRV--GRSDAVNAAIKDLTLEELVDKRAITQSLEMTHDPALD 1454
Query: 488 ---------------------------LDTSEKSELH-KLQQL----------KDEQGEL 509
L T + S++ KL++L +DE E
Sbjct: 1455 QNFHNAVDERRKLRDTINKEDGSPTSVLSTDQISKIQLKLRELSKTINELGKQRDELRER 1514
Query: 510 SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPE 567
+S + + KR + I +D+IC T G+ LA+ +F V+IDE+ Q TE
Sbjct: 1515 NSVIYRNRELNKRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTVIIDEACQCTELS 1574
Query: 568 CLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMH 627
+IPL G K+ ++VGD QL P ++ A+ QSLF R+ KP L VQYRMH
Sbjct: 1575 SIIPLRYGGKRCIMVGDPNQLPPTVLSGAASTYKYNQSLFVRMEN-NCKPHLLDVQYRMH 1633
Query: 628 PSLSEFPSNSFYEGTLQNG---VTINERQSSGIDFPW--PVPNRPM-FFYVQMGQEEISA 681
+S FPS FY+G L++G IN+RQ W P P FF + G+++ +A
Sbjct: 1634 SMISSFPSLEFYDGKLKDGPDMDNINQRQ-------WHETQPFAPYKFFDILTGKQQQNA 1686
Query: 682 SGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVN-YMSRNGALR 736
SY+N E V+K++ + + +IG+I+PY Q + + S G
Sbjct: 1687 KTMSYVNYDECQVSIEMVDKLLRLYEKKVDFTGKIGIISPYREQMQMMKKAFRSYFGG-- 1744
Query: 737 QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG-IGFLNDPRRLNVALTRARYGIVIL 795
++ I+ ++D FQG+EK+ II+SCVR+++ + +GFL D RR+NVALTRA+ + IL
Sbjct: 1745 -TIFTYIDFNTIDGFQGQEKEIIIISCVRADDSKNNVGFLKDFRRMNVALTRAKTSLWIL 1803
Query: 796 GNPKVLSKQPLWNGLLTHYKEHECL 820
G+ K L + LW L++ K CL
Sbjct: 1804 GHHKSLCRNKLWMNLISDAKTRGCL 1828
>gi|398411081|ref|XP_003856885.1| hypothetical protein MYCGRDRAFT_34379 [Zymoseptoria tritici IPO323]
gi|339476770|gb|EGP91861.1| hypothetical protein MYCGRDRAFT_34379 [Zymoseptoria tritici IPO323]
Length = 685
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/468 (31%), Positives = 238/468 (50%), Gaps = 64/468 (13%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R ++LI GPPGTGKT T ++ M K + ++LVC PSN++V
Sbjct: 201 PTLNDSQKDAIQFALASREVALIHGPPGTGKTHTLIELILQMVKL-KLRLLVCGPSNISV 259
Query: 448 DQLAEKISATGLKVVRL----------CAKSREAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + +VRL + S E +S + + VR+ ++++ +
Sbjct: 260 DNIVERLAPHKVNMVRLGHPARLLPGVLSHSMEYLSRTSDAAAIVTDVRNEMDAKQASIR 319
Query: 498 KLQQLKDEQ---GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + GEL K+Y+ + ++ + + V+ T G+G +L + +F
Sbjct: 320 KTRNGRERRVIYGELKDL-RKEYRQREGRVVSDLLRGSGVVLSTLHGSGGYQLKDQQFDV 378
Query: 555 VLIDESTQATEPECLIP-LVLGAKQVVLVGDHCQLGPVI--MCKKAAR------------ 599
V++DE++QA E +C IP L GA +++L GDH QL P I + K A+
Sbjct: 379 VIVDEASQALEAQCWIPVLSSGASKLILAGDHLQLPPTIKSLNSKTAKKTSTKVENATEG 438
Query: 600 ---AGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
L +LF+RL+ L I+ L QYRMH + ++PS + YEG L + R
Sbjct: 439 EDHVKLETTLFDRLLALHGSKIKRMLTTQYRMHDLIMQYPSEALYEGKLIAAEAVKARLL 498
Query: 655 SGIDFPWPV-----PNRPMFFYVQMG-----QEEISASGT---------SYLNRTEAANV 695
D P+ V + P+ FY G + E SG S +N EA
Sbjct: 499 H--DLPYEVRKTDDTSEPVVFYDTAGGDFPEKTEDDNSGAKGKSSLLAESKVNEYEAGIA 556
Query: 696 EKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGRE 755
+ V + + +GV I +ITPY GQ A + + + Y IE+ SVD FQGRE
Sbjct: 557 QLHVKSLIEAGVKAEDIAIITPYNGQLALLSQML-------KDRYPGIELESVDGFQGRE 609
Query: 756 KDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
K+ +I+S VRSN +GFL + RRLNVA+TR + +V++G+ + + +
Sbjct: 610 KEAVIVSLVRSNPEHEVGFLAEKRRLNVAMTRPKRALVVIGDSETICR 657
>gi|407920626|gb|EKG13814.1| hypothetical protein MPH_09028 [Macrophomina phaseolina MS6]
Length = 1990
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 254/554 (45%), Gaps = 112/554 (20%)
Query: 391 LNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMA----KQGQGQV-------- 437
LN +Q AVKS + +LIQGPPG+GKT T AIV + K G G V
Sbjct: 1282 LNRAQAKAVKSAIDNDAFTLIQGPPGSGKTKTIVAIVGALLTDSLKSGGGTVISTPAGMN 1341
Query: 438 --------------LVCAPSNVAVDQLA----EKISATG-----LKVVRLCAKSREAVSS 474
LVCAPSN AVD+L E I T + VVRL +A+++
Sbjct: 1342 NAAVRNNLPAPKKLLVCAPSNAAVDELVMRFKEGIKTTSGQHKKISVVRLG--RSDAMNA 1399
Query: 475 PVEHLTLHYQV-----------------------RHLDTSEK---------------SEL 496
V+ +TL V H SE+ EL
Sbjct: 1400 NVKDVTLDELVNARLNINPEQNGDQREETGKVMKEHQAVSERLRNAREKLDSGEVKGDEL 1459
Query: 497 HKLQQ----LKDEQGELSSS-DEKKYKAL---------KRATEREISQSADVICCTCVGA 542
+L+ L+ ++ +LSS DE K + ++ ++ I + VIC T G+
Sbjct: 1460 SRLKDEFDILRRQKAQLSSKIDECKDREASQGRMADLNRKRAQQAILDESHVICATLSGS 1519
Query: 543 GDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G N F V++DE+ Q E LIPL G + +LVGD QL P + K+AAR
Sbjct: 1520 GHEMFQNLNIEFETVVVDEAAQCVEMSALIPLKYGCAKAILVGDPKQLPPTVFSKEAARF 1579
Query: 601 GLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
QSLF R+ + L QYRMHP +S FPS +FY+G L +G + +
Sbjct: 1580 QYEQSLFVRMQTNHPNDVHLLDTQYRMHPEISYFPSQTFYDGRLLDGADMAALREK---- 1635
Query: 660 PW-----PVPNRPMFFYVQMGQEEISASGTSYLNRTE----AANVEKIVTTFLRSGVVPS 710
PW P R FF VQ GQ + + G S +N E A +++ F S +
Sbjct: 1636 PWHSSTLLAPYR--FFDVQ-GQHQSAPKGHSLINIAEIDVAMALYSRLMNDFKDSVDLRG 1692
Query: 711 QIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
+IG+ITPY+ Q + + +R +++ +E + D++QGRE + II SCVR++
Sbjct: 1693 KIGIITPYKSQLRELKDRFARQYG--DTVFEYVEFNTTDAYQGRESEIIIFSCVRASPAG 1750
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN-LK 829
GIGFL D RR+NV LTRA+ + +LGN + L + W L+ ++ E G + L+
Sbjct: 1751 GIGFLQDIRRMNVGLTRAKSSLWVLGNSQSLMRGQFWKLLVEDAQKRERYTTGDVRGMLR 1810
Query: 830 QSMVQFQKPKKIYN 843
+ F PK Y+
Sbjct: 1811 KHSSAFPAPKGAYS 1824
>gi|441501354|ref|ZP_20983473.1| putative helicase [Fulvivirga imtechensis AK7]
gi|441434890|gb|ELR68315.1| putative helicase [Fulvivirga imtechensis AK7]
Length = 641
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 261/556 (46%), Gaps = 63/556 (11%)
Query: 298 SVGHVIKLTAQEEVALELRASQGVPVDINHG-FSVDFVWKSTSFDRMQGAMKTFAVDETS 356
+V V+ +++++ + L A +P IN G V ++ ++ M+ A+K
Sbjct: 100 AVNGVVNYVSKQDMLMTLNADD-IPDWINDGQLGVQLLFDENAYREMEKAVKKLIKTSDE 158
Query: 357 VSGYIYHHLL-GHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPP 414
+ LL G E + R+ P +PGL N SQ A+ VL +++I GPP
Sbjct: 159 RLNELKEILLAGREAQF---RSHKP--VTSPGL---NESQNKALNLVLSATDVAIIHGPP 210
Query: 415 GTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSS 474
GTGKT T + K + Q LVCAPSN AVD LA+++ G+ V+R+ +R V+
Sbjct: 211 GTGKTTTLIQAILETLKI-EKQTLVCAPSNAAVDLLADRLGEQGVNVLRIGHPAR--VTE 267
Query: 475 PVEHLTLHYQV-RHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE------ 527
TL ++ +H D L K Q E S KKYK ERE
Sbjct: 268 ETLGKTLDVRITKHPDYKNLKALRK-------QAEEYRSMGKKYKRHFGYAEREQRKRLL 320
Query: 528 --------------------ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPE 567
I + VI CT VGA L F V +DE+ QA EP
Sbjct: 321 TEARALYDEADHLSFYITSDIIAKSQVIACTMVGANSAMLKGMHFNTVFMDEAAQALEPA 380
Query: 568 CLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMH 627
IP++ A +V+ GDHCQL P I +AAR GL +LFE+ + + L+ QYRM+
Sbjct: 381 SWIPII-KADRVIFAGDHCQLPPTIKSFEAARNGLEITLFEKAIKQNQADVMLEEQYRMN 439
Query: 628 PSLSEFPSNSFYEGTLQNGVTINERQ----SSGIDFPWPVPNRPMFFYVQMGQEEISASG 683
+ F S FY+ L T+ + ++F + F+ + E +S+
Sbjct: 440 MDIMNFSSRIFYKNRLVANQTVAHWKIFEGDQTVEF---IDTAGCGFFEDVDPETMSSFN 496
Query: 684 TS---YLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLY 740
T L R +E+I L IG+I PY+ Q + + + + ++ +QL
Sbjct: 497 TEEAELLLRHFRQYIEEIKA--LEKFEEVESIGIIAPYKAQVSLLQDLVQQSN-FDEQLV 553
Query: 741 KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKV 800
++ V +VDSFQG+E+D I ++ VRSNE IGFL + RR+NVA+TRAR +VI+G+
Sbjct: 554 NKLTVNTVDSFQGQERDIIYITLVRSNEKGEIGFLANTRRMNVAITRARKKLVIIGDSAT 613
Query: 801 LSKQPLWNGLLTHYKE 816
+ + ++ L + E
Sbjct: 614 IGQNEFYSAFLDYVNE 629
>gi|301787841|ref|XP_002929345.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Ailuropoda melanoleuca]
Length = 995
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 237/460 (51%), Gaps = 51/460 (11%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ASQ AV L Q+ +++I GPPGTGKT T I+ +QG +VL CAPSN+AVD
Sbjct: 189 LDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGL-KVLCCAPSNIAVDN 247
Query: 450 LAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKL 499
L E+++ +++RL +R +AV + ++ + +R D + ++
Sbjct: 248 LVERLARCKQRILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRK-DIDQAFAKNRQ 306
Query: 500 QQLKDEQGELSSSDEKKYKALKRATEREISQS---ADVICCTCVGAGD----PRLANFRF 552
Q K E+ + S + K LK E + +S A V+ T GA L + F
Sbjct: 307 TQDKREKSSVWSEIKLLRKELKEREEAAMLESLTSAAVVLATNTGASSDGPLKLLPDSHF 366
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 612
V+IDE QA E C IPL L A++ +L GDH QL P + KAA AGL+ SL ERL
Sbjct: 367 DVVVIDECAQALEASCWIPL-LKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAE 425
Query: 613 L-GLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQN-------------GVTINERQSSGI 657
G + +R L VQYRMH ++ ++ S++ Y G L GV E +GI
Sbjct: 426 EHGARVVRTLTVQYRMHRAIMQWASDALYHGQLTAHPSVAGHLLRDLPGVAATE--ETGI 483
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
P + + ++ +E+ + G N E V + + +GV S I VITP
Sbjct: 484 --PLLLVDTAGCGLFELEEEDDQSKG----NPGEVRLVSLHIQALVDAGVQASDIAVITP 537
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q V+ + ++ A R + E+E+ SVD FQGREK+ ++LS VRSN +GFL +
Sbjct: 538 YNLQ----VDLLRQSLAHR---HPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAE 590
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
RR+NVA+TRAR + ++ + + ++ L+ H+ EH
Sbjct: 591 DRRINVAVTRARRHVAVVCDSRTVNNHAFLKTLVDHFTEH 630
>gi|310791058|gb|EFQ26587.1| helicase sen1 [Glomerella graminicola M1.001]
Length = 2076
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 240/526 (45%), Gaps = 106/526 (20%)
Query: 408 SLIQGPPGTGKTVTSAAIVYHMAK--------------QGQG-------QVLVCAPSNVA 446
+LIQGPPGTGKT T A+V + GQ ++LVCAPSN A
Sbjct: 1353 TLIQGPPGTGKTKTIIAMVGSLLTGNIQPPGTAIKPKLVGQAAQNSMPKKLLVCAPSNTA 1412
Query: 447 VDQLAEKI---------SATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHL---DTSE-- 492
VD+L ++ S + V+RL +A+++ V +TL V+ DT++
Sbjct: 1413 VDELVLRLKQGVKTMNGSFHKINVLRLG--RSDAINAAVRDVTLDELVKQKLQGDTTQSK 1470
Query: 493 -KSELHKLQ----QLKDEQGE---------------LSSSDEKKYKALKRA--------- 523
K E K+ +++DE E LS + ++ + LKRA
Sbjct: 1471 AKEERDKMHNDAAKIRDELAEIRPKLDEARAAGDRNLSQALQRSFDQLKRAQINIGAKID 1530
Query: 524 -------------------TEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQ 562
++EI A V+C T G+G N F V+IDE+ Q
Sbjct: 1531 EDKASGNTASREAEIRRRQIQQEILDGAQVLCATLSGSGHEMFKNLNVEFETVIIDEAAQ 1590
Query: 563 ATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRL-Q 621
E LIPL G + +LVGD QL P ++ + AAR G QSLF R+ + L
Sbjct: 1591 CVELSALIPLKYGCTKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQNHPDYVHLLD 1650
Query: 622 VQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR--PMFFYVQMGQEEI 679
QYRMHP +S FPS FYEG L +G E S+ PW P F+ G +
Sbjct: 1651 RQYRMHPEISLFPSMEFYEGKLVDG----EDMSALRCQPWHATALLGPYRFFDVEGTQSK 1706
Query: 680 SASGTSYLNRTEAANV----EKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 735
+ G S +N E E+ F R+ + +IG+ITPY+ Q + SR
Sbjct: 1707 GSKGRSLVNHAELKVAMQLYERFKADFGRNYDIKGKIGIITPYKAQLQELKWQFSRQ--F 1764
Query: 736 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 795
+ +IE + D+FQGRE + II SCVR++ GIGF+ D RR+NV LTRA+ + IL
Sbjct: 1765 GDNITDDIEFNTTDAFQGRECEIIIFSCVRADPTGGIGFVKDIRRMNVGLTRAKSSLWIL 1824
Query: 796 GNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKI 841
G+ + L + WN L+ + K+ +G + M +KP I
Sbjct: 1825 GDSRALVQGEFWNKLIDNAKQRSLYTKGDI------MSMLRKPSVI 1864
>gi|315055809|ref|XP_003177279.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
gi|311339125|gb|EFQ98327.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
Length = 2179
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 258/538 (47%), Gaps = 109/538 (20%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYH-----MAKQGQGQ------- 436
+LN +Q A+KS + +LIQGPPG+GKT T AIV +A++ Q
Sbjct: 1300 DLNLAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGAILTPILAERRVSQPKISTDS 1359
Query: 437 -----------VLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAVSSP 475
+LVCAPSN AVD+L + G+K V+RL +A+++
Sbjct: 1360 VQANKSATSKKLLVCAPSNAAVDELVMRFK-EGVKTLNGKTQPISVIRL--GRSDAINAN 1416
Query: 476 VEHLTLH-----------------------YQVRHLDTSEK------------------- 493
V +TL Y H +TS K
Sbjct: 1417 VLDVTLDELVNAKLSQNGPAKNGEERDLQSYFNEHKETSTKFTEIRQRIDQCRARAEPVP 1476
Query: 494 SELHK-LQQLKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTCVGA 542
+EL + LK ++ +LS ++ +K + A +R ++EI A VIC T G+
Sbjct: 1477 TELEREFDLLKRKKAQLSQAIDNARDKNHSAARNAELTRRRIQQEIIDGAHVICSTLSGS 1536
Query: 543 GDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G + F V+IDE+ Q+ E LIPL G + VLVGD QL P ++ K+A+R
Sbjct: 1537 GHEMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRF 1596
Query: 601 GLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNG---VTINERQSSG 656
QSLF R+ + L QYRMHP +S+FPS +FY+G LQ+G + ++ G
Sbjct: 1597 QYEQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHG 1656
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL---RSGVVPSQIG 713
+ P FF VQ G +A G S +N E ++ L R+ +IG
Sbjct: 1657 SELLGPY----RFFDVQ-GMHSSAAKGHSLVNIAELTVAMRLYERLLADYRNYDFAGKIG 1711
Query: 714 VITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGI 772
+ITPY+GQ R + ++ G+ ++ +E + D+FQGRE + II SCVR+++ +GI
Sbjct: 1712 IITPYKGQLRELKSRFAAKYGS---SIFTAVEFNTTDAFQGRECEVIIFSCVRASD-RGI 1767
Query: 773 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
GFL+D RR+NV LTRA+ + +LGN + L + W L+ ++ + EG + + Q
Sbjct: 1768 GFLSDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARDRQLYTEGDILKILQ 1825
>gi|429849984|gb|ELA25306.1| DNA-binding protein smubp-2 [Colletotrichum gloeosporioides Nara
gc5]
Length = 665
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 151/467 (32%), Positives = 233/467 (49%), Gaps = 65/467 (13%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R ++LI GPPGTGKT T ++ M K ++LVC PSN++V
Sbjct: 212 PSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQMLKLDL-RILVCGPSNISV 270
Query: 448 DQLAEKISATGLKVVRL----------CAKSREAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E++S + ++RL A S + ++ E + VR ++++ +
Sbjct: 271 DNIVERLSPHKIPILRLGHPARLLPSVVAHSLDVLTQTSEAGAIVKDVRAEMDAKQASIK 330
Query: 498 KLQQLKDEQ---GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + G+L ++ + +R + +S V+ T GAG +L + +F
Sbjct: 331 KTRNGRERRQIYGDLKELRKEFRERERRCVSNLVRESK-VVLATLHGAGGHQLRDQQFDV 389
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM-----CKKAARAG-------- 601
V+IDE++QA E +C +PL L AK+ V GDH QL P I KK G
Sbjct: 390 VIIDEASQALEAQCWVPL-LSAKKAVCAGDHLQLPPTIKSLNSKVKKVLVEGAGEKQIKG 448
Query: 602 --LAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
L +LF+RL+ L I+ L QYRMH + FPS+ Y+G L + ER
Sbjct: 449 MTLETTLFDRLLALHGSSIKRMLTTQYRMHEKIMRFPSDELYDGRLIAAEAVKERLLK-- 506
Query: 658 DFPWPV-----PNRPMFFYVQMG----------------QEEISASGTSYLNRTEAANVE 696
D P+ V N P+ F G + + S G S N EAA V
Sbjct: 507 DLPYEVQDTEDTNEPLIFIDTQGGDYPEKSEDDDKDAVKKAKFSLHGESKSNEMEAALVR 566
Query: 697 KIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREK 756
+ + + +GV P I V+TPY Q A + L++Q + IE+ SVD FQGREK
Sbjct: 567 QHAQSLVDAGVKPEDIAVVTPYNAQLAIL-------APLKEQ-FPGIELGSVDGFQGREK 618
Query: 757 DYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
+ +I+S VRSN +GFL + RRLNVA+TR + + ++G+ + + +
Sbjct: 619 EAVIVSLVRSNSEGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVMR 665
>gi|6322835|ref|NP_012908.1| Hcs1p [Saccharomyces cerevisiae S288c]
gi|465704|sp|P34243.1|HCS1_YEAST RecName: Full=DNA polymerase alpha-associated DNA helicase A
gi|395256|emb|CAA52266.1| unnamed protein product [Saccharomyces cerevisiae]
gi|486007|emb|CAA81852.1| DIP1 [Saccharomyces cerevisiae]
gi|151941528|gb|EDN59891.1| DNA helicase A [Saccharomyces cerevisiae YJM789]
gi|285813242|tpg|DAA09139.1| TPA: Hcs1p [Saccharomyces cerevisiae S288c]
gi|392298121|gb|EIW09219.1| Hcs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 683
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 176/566 (31%), Positives = 283/566 (50%), Gaps = 65/566 (11%)
Query: 288 SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKST---SFDRMQ 344
S D+ + G V K+ + ++ + L SQ V + +S ++ K+T +++RM+
Sbjct: 105 SEDSNGEQAECSGVVYKM-SDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRME 163
Query: 345 GAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL-PELNASQVFAVKSVL 403
M+ + + + I +L+ E + NT + L P LN SQ A+ +
Sbjct: 164 STMRKLSEISSPIQDKIIQYLVN---ERPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAI 220
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHM-AKQGQGQVLVCAPSNVAVDQLAEKIS--ATGLK 460
+++I GPPGTGKT T ++ + K + ++L+C PSN++VD + E+++
Sbjct: 221 NNDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL 280
Query: 461 VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ----LKDEQGELSSSDEKK 516
++R+ +R S+ L + + + E+ KL Q LK+ + + +E K
Sbjct: 281 LLRIGHPARLLDSNKRHSLDILSKKNTIVKDISQEIDKLIQENKKLKNYKQRKENWNEIK 340
Query: 517 Y--KALKR---ATEREISQSADVICCTCVGAGDPRLA-------NFR-FRQVLIDESTQA 563
K LK+ T +++ + ++ T G+ L NF+ F ++IDE +QA
Sbjct: 341 LLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQA 400
Query: 564 TEPECLIPLVLGAKQ---VVLVGDHCQLGPVIMCK--KAARAGLAQSLFERLVLLGLKPI 618
EP+C IPL+ Q +VL GD+ QL P I + K L +LF+R++ + P
Sbjct: 401 MEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIFPK 458
Query: 619 R-----LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNR----- 666
R L VQYRM+ + EFPS+S Y G L T+ R ID P P+
Sbjct: 459 RDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDDDT 516
Query: 667 --PMFFYVQMGQE------EISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITP 717
P+ +Y G E E + G+ Y N E A V++ + LRS VP + IGVI+P
Sbjct: 517 KIPLIWYDTQGDEFQETADEATILGSKY-NEGEIAIVKEHIEN-LRSFNVPENSIGVISP 574
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q +++ + L +IE+++VD FQGREKD IILS VRSNE +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 778 PRRLNVALTRARYGIVILGNPKVLSK 803
RRLNVA+TR R +V++GN +VL +
Sbjct: 630 ERRLNVAMTRPRRQLVVVGNIEVLQR 655
>gi|426195915|gb|EKV45844.1| hypothetical protein AGABI2DRAFT_72010 [Agaricus bisporus var.
bisporus H97]
Length = 1864
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 257/542 (47%), Gaps = 115/542 (21%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIV-YHMAKQ---------GQG---- 435
+N Q A+ KS+ SLIQGPPGTGKT T +V ++K+ G+G
Sbjct: 1299 INEPQAIAILKSMATNGFSLIQGPPGTGKTSTICGLVSLALSKRNRPAVHIQIGKGPPPE 1358
Query: 436 -----QVLVCAPSNVAVDQLAEKIS---------ATGLKVVRLCAKSREAVSSPVEHLTL 481
+VL+CAPSN A+D++A +I +KVVR+ + ++++S V+ ++L
Sbjct: 1359 RPPLPKVLLCAPSNAAIDEIARRIKDGYRGPEKRGEAIKVVRI--GTEQSMNSSVKDVSL 1416
Query: 482 HYQV-------RHLDTS---------------EKSELHK--------------------- 498
+ V D+S +K +LH+
Sbjct: 1417 DHLVDLEIDPPNSSDSSAEIITIRKELEGIRVKKDQLHRKLEEDPNTAQLATIQSEIAQL 1476
Query: 499 ----------LQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLA 548
+ +LKDEQ S + AL+R+T ++I ADVIC T GAG +
Sbjct: 1477 NARRSSLAGRMDRLKDEQ----KSASRTLDALRRSTRQKILLEADVICSTLSGAGHEIIE 1532
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
F +++DES QA E LIPL ++ +LVGD QL P ++ ++A++ QSLF
Sbjct: 1533 RLDFDMIIVDESAQAIELSTLIPLKYSCQRCILVGDPQQLPPTVLSQEASKYRYNQSLFV 1592
Query: 609 RLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR- 666
R+ + L +QYRMHP +S+ PS+ FY+G L +G ++ E+ + PW
Sbjct: 1593 RMQRSQPDAVHLLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQ----PWHKNAHF 1648
Query: 667 --PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR--------SGVVPSQIGVIT 716
FF V G EE+S L A V F R + ++G+++
Sbjct: 1649 GIYKFFNVSKGLEEMSRHSIKNLAECHVA-----VALFNRLRREYGQDMSDIDYRVGIVS 1703
Query: 717 PYEGQRAYIV-NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE-HQGIGF 774
Y Q A + + R G +++ ++ +VD FQG+EKD IILSCVR+ Q +GF
Sbjct: 1704 MYRAQIAELKRQFEQRFG---KEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGF 1760
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
L+D RR+NVALTRA+ + ILGN L + P W ++ + LVE L+ S
Sbjct: 1761 LSDVRRMNVALTRAKSSLYILGNAATLERSDPNWRRIVGDARGRSRLVEVCLSPAHDSKT 1820
Query: 834 QF 835
+F
Sbjct: 1821 EF 1822
>gi|167378864|ref|XP_001734957.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903256|gb|EDR28864.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 1040
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 172/297 (57%), Gaps = 12/297 (4%)
Query: 527 EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
EI + +C T L +F ++DE+ Q+ EPE L ++ ++ VL+GD
Sbjct: 658 EILNGIECVCSTLTICTRSTLLKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDIQ 716
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVL-LGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQN 645
QL P + +A AG +S+FER + +K L+ QYRMHP+++EF + FY L+N
Sbjct: 717 QLQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAIAEFSNKMFYSFKLEN 776
Query: 646 GVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS 705
GV +R I +P P+ F G+E+ +SGTSY N E +++IV L++
Sbjct: 777 GVDGEDRFDDRIINFFPDYTNPIMFINCDGREQYGSSGTSYNNEGEVLIIKQIVDGLLKN 836
Query: 706 GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 765
V ++IG+I+PY+ Q+ I +S +I+VA++D FQG EK+YII SCVR
Sbjct: 837 KVKENEIGIISPYQAQQELISQCVS----------TKIKVANIDGFQGNEKEYIIFSCVR 886
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVE 822
SN+ GIGF+ND +RLNVALTRA+ G++++GN + L +W+ L+ H+ + L E
Sbjct: 887 SNQTLGIGFVNDYKRLNVALTRAKCGLIVIGNIQTLIGSKVWSMLVHHFYLRDALFE 943
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 16/142 (11%)
Query: 341 DRMQGAMKTFAV-DETSVSGYIYHHLLGHEVEVQMVRNT------LPRRFGAPGLPELNA 393
D+ +KT V E V GY L + + +T L ++ P L LN
Sbjct: 351 DKRNPFIKTLEVLQEREVDGYYSKILCCNMFQTLKTNDTITYDEILTDKYNIPNLSNLND 410
Query: 394 SQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMA---------KQGQGQVLVCAPSN 444
Q+ A+ + L ISL+ GPPGTGKT + +I ++ + + ++LVCA SN
Sbjct: 411 YQIKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKHRFYNRNRAERRLLVCASSN 470
Query: 445 VAVDQLAEKISATGLKVVRLCA 466
AVD + K+ G+ +R+ A
Sbjct: 471 NAVDVICSKLIEKGIPTIRIVA 492
>gi|116193595|ref|XP_001222610.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
gi|88182428|gb|EAQ89896.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
Length = 2053
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 249/544 (45%), Gaps = 126/544 (23%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV----YHMAKQGQGQV------- 437
+LN Q A+ + + +L+QGPPGTGKT T A+V + K G V
Sbjct: 1319 QLNPGQARAILNAKENDGFTLVQGPPGTGKTKTIVAMVGCLLTGVLKSSSGAVPVVRPGA 1378
Query: 438 -----------LVCAPSNVAVDQLAEKISAT---------GLKVVRLCAKSREAVSSPVE 477
LVCAPSN AVD+L ++ A ++V+RL +A+++ V+
Sbjct: 1379 ASINQAPSKKLLVCAPSNAAVDELVLRLKAGVKTMNGASHKIEVIRLG--RTDAINAAVK 1436
Query: 478 HLTLHYQVRH-----LDTSEKSELHKLQQ----LKDEQGEL--------SSSD------- 513
+TL V+ ++ S S+ KL Q LK++ EL +S D
Sbjct: 1437 DVTLDELVKARMDSAMNNSGPSDREKLHQEAGMLKEKITELRPQLEAARASGDRTFIMKL 1496
Query: 514 EKKYKALK----------------------------RATEREISQSADVICCTCVGAGDP 545
++++ LK R +++I A V+C T G+G
Sbjct: 1497 QREFDDLKHRQAHVGAKIDANKSNGNTFAREVEIKRRQIQQDILDKAQVLCATLSGSGHE 1556
Query: 546 RLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 603
N F V+IDE+ Q E LIPL G + +LVGD QL P ++ + AAR G
Sbjct: 1557 MFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYD 1616
Query: 604 QSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
QSLF R+ K + L +QYRMHP +S+FPS FYEG LQ+G + + + PW
Sbjct: 1617 QSLFVRMQKNHAKDVHLLDMQYRMHPEISKFPSKEFYEGLLQDGADMGQLRMQ----PWH 1672
Query: 663 V-----PNRPMFFYVQMGQ------------EEISASGTSYLN-RTEAANVEKIVTTFLR 704
P R FF V+ Q EE+ + Y RT+ NVE
Sbjct: 1673 QSELLGPYR--FFDVKGSQSRGPRNQSLVNDEELKVAMQLYHRFRTDYGNVE-------- 1722
Query: 705 SGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCV 764
+ +IG+ITPY+ Q + + + +EIE + D+FQGRE + II SCV
Sbjct: 1723 ---LKGKIGIITPYKAQLFRLRQRFAEKYG--DGIAEEIEFNTTDAFQGRECEIIIFSCV 1777
Query: 765 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGP 824
R++ GIGF+ D RR+NV LTRAR + ILG+ + L + W L+ KE + G
Sbjct: 1778 RASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALVQGEFWGKLIEDAKERDRYTSGN 1837
Query: 825 LNNL 828
+ L
Sbjct: 1838 VMTL 1841
>gi|336367350|gb|EGN95695.1| hypothetical protein SERLA73DRAFT_186875 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380067|gb|EGO21221.1| hypothetical protein SERLADRAFT_476145 [Serpula lacrymans var.
lacrymans S7.9]
Length = 288
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/112 (82%), Positives = 103/112 (91%)
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
M NG+L++ LYKEIEVASVD+FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA
Sbjct: 1 MQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 60
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKK 840
+YG+VILGNPKVLSK PLW+ LLTHYKE CLVEGPLNNL+ SM+QF KP++
Sbjct: 61 KYGVVILGNPKVLSKHPLWHYLLTHYKEKNCLVEGPLNNLQPSMIQFSKPRR 112
>gi|210075156|ref|XP_002142993.1| YALI0A19404p [Yarrowia lipolytica]
gi|199424904|emb|CAG84178.4| YALI0A19404p [Yarrowia lipolytica CLIB122]
Length = 1930
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 247/519 (47%), Gaps = 85/519 (16%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIV-YHMAKQGQG------QVLVCA 441
++N SQ A+ L SLIQGPPGTGKT T IV ++K+ ++L+CA
Sbjct: 1234 KVNDSQAAAIYGSLNNTGFSLIQGPPGTGKTKTILGIVGSFLSKKASDIGNDNRRILLCA 1293
Query: 442 PSNVAVDQLAEKIS-----ATGLK----VVRLCAKSREAVSSPVEHLTLHYQVRHL-DTS 491
PSN AVD+L ++S ++G K ++R+ EAV+S V+ L +V L
Sbjct: 1294 PSNAAVDELVLRLSDGIYSSSGQKSEPKIIRIGRS--EAVNSKVKKYVLEERVDALLKEQ 1351
Query: 492 EKSEL--------HKLQQLKDEQGELS----------SSDE------------------- 514
EK + K+ +L DE+ ELS S+DE
Sbjct: 1352 EKDSVVNSTPELRQKMNKLLDERKELSAKLDDNSVKLSNDEVASIQSRLMVINREKNKIG 1411
Query: 515 -------KKYKALKRATERE-------ISQSADVICCTCVGAGDPRLANF--RFRQVLID 558
+K+ A R E E + + A++IC T + L + F V+ID
Sbjct: 1412 SEIDQQREKHAANFRRKETEKRNLNIRVLKEAEIICSTLSASSHNMLKSLGVAFETVIID 1471
Query: 559 ESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPI 618
E+ Q E LIP+ G ++VGD QL P ++ AA++ QSLF R+ +
Sbjct: 1472 EACQCIELSVLIPMKYGCTNAIMVGDPNQLPPTVLSTVAAKSKYEQSLFVRMQTANPSAL 1531
Query: 619 R-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR--PMFFYVQMG 675
L QYRMHP +S FP FY G L++G + E+ PW + P F+ G
Sbjct: 1532 HMLDTQYRMHPDISVFPREQFYRGILKDGAGMAEKTKK----PWHEYKQLAPYAFFDVAG 1587
Query: 676 QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 735
+E + S+ N E +++ + + IG+I+PY+ Q + + +R
Sbjct: 1588 NQE-ATRNHSFFNDAEVHLADQLYR-LMSNMYGKIDIGIISPYKQQVLRLKRHFTREYG- 1644
Query: 736 RQQLYKEIEVASVDSFQGREKDYIILSCVRSN-EHQGIGFLNDPRRLNVALTRARYGIVI 794
+ +IE SVD FQG+EKD II+SCVR++ + +GFL D RR+NVA TRAR + I
Sbjct: 1645 -GDILDKIEFNSVDGFQGQEKDIIIMSCVRASPDSDSVGFLADKRRMNVAFTRARSSMWI 1703
Query: 795 LGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMV 833
LGN LS+ +W ++ + + L++G KQ ++
Sbjct: 1704 LGNADTLSRNTIWRKVVNDARNRDMLMDGNRPLRKQDLI 1742
>gi|240273304|gb|EER36825.1| helicase SEN1 [Ajellomyces capsulatus H143]
Length = 2150
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 257/535 (48%), Gaps = 104/535 (19%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIV----------YHMAKQGQ---- 434
++N +Q AV+S + +LIQGPPG+GKT T A+V +A+ G
Sbjct: 1292 KVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKIARPGSSGDF 1351
Query: 435 ---------GQVLVCAPSNVAVDQLAEK-----ISATGLK----VVRLCAKSREAVSSPV 476
G++LVCAPSN AVD+L + I+++G K VVRL +A++S V
Sbjct: 1352 RPATRATTSGKLLVCAPSNAAVDELVMRFKEGVITSSGQKHNISVVRLGRS--DAINSNV 1409
Query: 477 EHLTLHYQV--------------RHLDT---------SEKSEL-HKLQQLKDEQGELSSS 512
+TL V + L T ++ +E+ +L Q + + + S
Sbjct: 1410 MDVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQFNEIRERLDQCRAKGQHVPSE 1469
Query: 513 DEKKYKALKRA----------------------------TEREISQSADVICCTCVGAGD 544
E+++ LKR ++EI + VIC T G+G
Sbjct: 1470 LEREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIINGSHVICATLSGSGH 1529
Query: 545 PRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
+ F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A+R
Sbjct: 1530 EMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQY 1589
Query: 603 AQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
QSLF R+ K + L QYRMHP +S FPS +FY+G L++G +++ + PW
Sbjct: 1590 EQSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLKDGPDMDKLRVR----PW 1645
Query: 662 PVPNR--PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVIT 716
P F+ G + G S +N E A + + +T + +IG+IT
Sbjct: 1646 HSSELLGPYRFFDVQGLHSSAPKGHSLVNLAELRVAMKLYERLTIDYMTYDFKGKIGIIT 1705
Query: 717 PYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+GQ + N + ++ G ++ +E + D+FQGRE + II SCVR++ ++GIGFL
Sbjct: 1706 PYKGQLREMKNQFANKYG---NSIFTTVEFNTTDAFQGRECEVIIFSCVRAS-NRGIGFL 1761
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
D RR+NV LTRA+ + +LGN + L + WNGL+ + +G + L Q
Sbjct: 1762 ADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLIIDAQSRNLYTQGDILKLLQ 1816
>gi|328875613|gb|EGG23977.1| AN1-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 1035
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 240/464 (51%), Gaps = 49/464 (10%)
Query: 386 PGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSN 444
P +LN +Q+ AV+ L I+LI GPPGTGKT T + ++GQ +VL CAPSN
Sbjct: 231 PITSKLNQTQIKAVEFALGSSDIALIHGPPGTGKTTTVVEFIVQCVRRGQ-RVLACAPSN 289
Query: 445 VAVDQLAEK-ISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE-----KSELHK 498
+AVD + EK I+ G+ R+ +R + + TL ++ ++ + +E + E+
Sbjct: 290 LAVDNMLEKLIAVNGINPTRVGHPAR--IMEGLSKYTLDHKTKNSEEAEVVRGLRKEIAD 347
Query: 499 LQQLKDEQGELSSSDEKK-----YKALK---RATE----REISQSADVICCTCVGAGDPR 546
L LK+ + + + D ++ K L+ R+ E ++ +++ V+ TC GA D
Sbjct: 348 L--LKETKSKGTDRDRRRVIGSTIKDLRKDLRSREVVLVEQVIKNSKVVLSTCTGAADYS 405
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
L + F V+IDE+ QA E C I + G +++VL GDH QL P I AA+ GL+ +L
Sbjct: 406 LRHHDFDIVVIDEAGQALEASCWIAIRKG-RRLVLAGDHQQLPPTIHSDDAAKDGLSVTL 464
Query: 607 FERLV-LLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID----FP 660
FERL+ + G K RL +QYRM+ S+ + S FY + ++ G++
Sbjct: 465 FERLIRIYGDKISRLLSIQYRMNQSIMNWSSKEFYNSEMHADESVASHLLQGLNPEKIKT 524
Query: 661 WPVPNRPMFFYVQMG-------QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
P P+ G ++EI S N EA V V L+ GV+ S IG
Sbjct: 525 TPTTTCPIVLIDTSGCDMEESMEDEIGVD-QSKSNIGEARVVATYVKKLLQHGVLESNIG 583
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN-EHQGI 772
+I+PY GQ + + K+IE+ +VD FQGREK+ II+S VRSN +
Sbjct: 584 IISPYNGQVKCLKAVIES---------KQIEIGTVDGFQGREKEVIIISMVRSNPPPHNV 634
Query: 773 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
GFL + RR NVA+TRAR +VI+ + +S P ++ + +E
Sbjct: 635 GFLKEDRRTNVAITRARRQVVIVADCLTISSYPFLKRMVDYCRE 678
>gi|190409806|gb|EDV13071.1| DNA helicase A [Saccharomyces cerevisiae RM11-1a]
gi|207343464|gb|EDZ70918.1| YKL017Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147817|emb|CAY81067.1| Hcs1p [Saccharomyces cerevisiae EC1118]
gi|323332808|gb|EGA74213.1| Hcs1p [Saccharomyces cerevisiae AWRI796]
Length = 683
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 176/566 (31%), Positives = 283/566 (50%), Gaps = 65/566 (11%)
Query: 288 SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKST---SFDRMQ 344
S D+ + G V K+ + ++ + L SQ V + +S ++ K+T +++RM+
Sbjct: 105 SEDSNGEQAECSGVVYKM-SDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRME 163
Query: 345 GAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL-PELNASQVFAVKSVL 403
M+ + + + I +L+ E + NT + L P LN SQ A+ +
Sbjct: 164 STMRKLSEISSPIQDKIIQYLVN---ERPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAI 220
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHM-AKQGQGQVLVCAPSNVAVDQLAEKIS--ATGLK 460
+++I GPPGTGKT T ++ + K + ++L+C PSN++VD + E+++
Sbjct: 221 NNDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL 280
Query: 461 VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ----LKDEQGELSSSDEKK 516
++R+ +R S+ L + + + E+ KL Q LK+ + + +E K
Sbjct: 281 LLRIGHPARLLDSNKRHSLDILSKKNTIVKDISQEIDKLIQENKKLKNYKQRKENWNEIK 340
Query: 517 Y--KALKR---ATEREISQSADVICCTCVGAGDPRLA-------NFR-FRQVLIDESTQA 563
K LK+ T +++ + ++ T G+ L NF+ F ++IDE +QA
Sbjct: 341 LLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQA 400
Query: 564 TEPECLIPLVLGAKQ---VVLVGDHCQLGPVIMCK--KAARAGLAQSLFERLVLLGLKPI 618
EP+C IPL+ Q +VL GD+ QL P I + K L +LF+R++ + P
Sbjct: 401 MEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIFPK 458
Query: 619 R-----LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNR----- 666
R L VQYRM+ + EFPS+S Y G L T+ R ID P P+
Sbjct: 459 RDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDDDT 516
Query: 667 --PMFFYVQMGQE------EISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITP 717
P+ +Y G E E + G+ Y N E A V++ + LRS VP + IGVI+P
Sbjct: 517 KIPLIWYDTQGDEFQETADEATILGSKY-NEGEIAIVKEHIEN-LRSFNVPENSIGVISP 574
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q +++ + L +IE+++VD FQGREKD IILS VRSNE +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 778 PRRLNVALTRARYGIVILGNPKVLSK 803
RRLNVA+TR R +V++GN +VL +
Sbjct: 630 ERRLNVAITRPRRQLVVVGNIEVLQR 655
>gi|311746247|ref|ZP_07720032.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
gi|126576477|gb|EAZ80755.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
Length = 642
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 186/633 (29%), Positives = 291/633 (45%), Gaps = 77/633 (12%)
Query: 234 REPCLNMMKESQSKDNVTIRW--------DIGLNKKRVAYFVFPKEDNELRLV-PGDELR 284
R+ LN + K+ +T W IG+ + R+ V EDN+ G +
Sbjct: 27 RQKFLNTSIADKKKEGIT--WHPVQLKKSKIGMGE-RLIVEVEKHEDNQSSAFNSGKSVS 83
Query: 285 LRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHG-FSVDFVWKSTSFDRM 343
+ D+ A V VI + + + L+A + +P + G VD ++ S+ M
Sbjct: 84 FFTTQDSYQSAEHRVNGVINFVRKNTMIVTLQADE-IPDWMEGGRLGVDLLFDEASYREM 142
Query: 344 QGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAP--GLPELNASQVFAVKS 401
+ A+K +E + H LLG + P+ P P LN SQ A +
Sbjct: 143 EFALKKMMSEENKRVEELKHVLLGEKA---------PQFNDTPYKSNPNLNFSQNQACQL 193
Query: 402 VLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLK 460
+ + ++++ GPPGTGKT T + GQ +LV APSN AVD L EK+ G++
Sbjct: 194 ISNAKDVAVVHGPPGTGKTTTLIEAIEQAVTAGQS-ILVSAPSNAAVDLLVEKLIDQGIE 252
Query: 461 VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKY--- 517
+RL +R V + + TL + S +L KL++ D+ +L+ ++K+
Sbjct: 253 TLRLGHPAR--VEEKILNQTLDAKTAF--HSSYRDLKKLRKETDQYLKLAKQYKRKFGPE 308
Query: 518 -------------------KALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLID 558
K+L+ + +I Q V T VGA L F V ID
Sbjct: 309 ERAQRKLMYAEVSRLREASKSLEEYIQYDIFQKTKVFASTLVGASSYSLKGMEFDVVFID 368
Query: 559 ESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPI 618
E+ Q E IP +L AK+VV GDHCQL P I +AA+ GLA++LFE+++ +
Sbjct: 369 EAAQGLEAATWIP-ILKAKKVVFAGDHCQLPPTIKSYQAAQEGLAETLFEKVIARKSQAS 427
Query: 619 R-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID--FPWPVPNRPMFFYVQMG 675
+ LQVQYRM + F + FY+G LQ G D W + + Q
Sbjct: 428 QMLQVQYRMPEVIMGFSNEQFYKGELQAAENTKLHTFPGEDQQLEW-IDTAGAGYNDQKE 486
Query: 676 QEEIS-------ASGTSYLNRTEAANVEKI-VTTFLRSGVVPSQIGVITPYEGQRAYIVN 727
E +S A YLN + +I + F + G IG+I PY G + ++
Sbjct: 487 AESLSTCNPEEAAFACRYLNEM----IVRIGIGNFKQEGWT---IGLIAPY-GAQVRLLR 538
Query: 728 YMSRNGALRQQLY---KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 784
+ G L I + +VD FQG+E+D +++S RSNE IGFL D RR+NVA
Sbjct: 539 SLIFEGFEYPNLKAFSDLITIDTVDGFQGQERDLMLISLTRSNEKGEIGFLADERRMNVA 598
Query: 785 LTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
LTRA+ +V++G+ L+ P ++ LL +++++
Sbjct: 599 LTRAKRKLVLVGDSSTLALNPFFDQLLQYFEKN 631
>gi|126302999|ref|XP_001376033.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein-like [Monodelphis domestica]
Length = 2843
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 243/515 (47%), Gaps = 75/515 (14%)
Query: 381 RRFGAP-GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAK-------- 431
R F P G +LN SQ AV LQ+P +LIQGPPGTGKTV IVY K
Sbjct: 2333 RTFDIPQGKFKLNKSQNSAVLEALQKPFTLIQGPPGTGKTVVGVHIVYWFNKLNQEKPET 2392
Query: 432 -----------QGQGQVLVCAPSNVAVDQLAEKI--SATGLKVVRLCAKSREAVSSPV-- 476
+G+ +L C PSN +VD ++E + LK +++ ++ EA+ PV
Sbjct: 2393 DPLPLTGDNKNRGEKCILYCGPSNKSVDVVSEILLQWKEELKPLQVYSEQMEAMEFPVPG 2452
Query: 477 -------------------EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKY 517
+ LH+++R ++ + + + S + ++Y
Sbjct: 2453 SYRKMFRKNTREGKPKPELRDIVLHHRIRMPSNPFFRKIIEFDARVRKGDQFSEDEIEEY 2512
Query: 518 KALKRATEREISQSADVICCTCVGAGDPRLA-NFRFRQVLIDESTQATEPECLIPLVL-- 574
K++ + ++ +I CTC A L + +Q+LIDE+ ATEPE LIPLV
Sbjct: 2513 KSITKLARMVELKNHGIILCTCSCAASSILVKHLNVKQILIDEAGMATEPESLIPLVNFP 2572
Query: 575 GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFP 634
A++VVL+GDH QL P + GL +SLFER + L +QYRMH + FP
Sbjct: 2573 QAEKVVLLGDHKQLQPFVKNDHCQNLGLEKSLFER---YHGQAWMLDIQYRMHNDICRFP 2629
Query: 635 SNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASG-----TSYLNR 689
S FY+ L+ + + +R S P V +F YVQ +E + S S NR
Sbjct: 2630 SKEFYDNKLKTSLKL-KRMPSVFCHPDQVSCPIIFGYVQGVEESLLVSTDEGNENSRANR 2688
Query: 690 TEAANVEKIVTTF-LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 748
E +V +I L + P I +++PY Q + I N L ++ + V+S+
Sbjct: 2689 DEVDHVVRIANQLTLDRTIKPKDIAILSPYNAQVSEI------NKRLLKEGITGVTVSSI 2742
Query: 749 DSFQGREKDYIILSCVRS---NEHQG----------IGFLNDPRRLNVALTRARYGIVIL 795
QG E Y+ILS VRS E G +GF++DP ++NV +TRA+ G+ I+
Sbjct: 2743 KKSQGSEWRYVILSTVRSCPPGEIDGRPTKSWLKKHLGFVSDPHQVNVGITRAQEGLCII 2802
Query: 796 GNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
GN +LS P+W L+ Y + C V ++Q
Sbjct: 2803 GNHYLLSCCPMWQRLIDFYTKKGCCVMASSVQVRQ 2837
Score = 99.8 bits (247), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 200/482 (41%), Gaps = 84/482 (17%)
Query: 394 SQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAE 452
S + + S L R P LI GP GTGKT T A + KQ +VL+C +N A D
Sbjct: 775 SFITGIASPLSRVPPLLIYGPFGTGKTYTLAMATLEVMKQPNTKVLICTHTNSAADIYIR 834
Query: 453 K-----ISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQG 507
+ ++A + V L KS E+ + + TL Y
Sbjct: 835 EYFHAYVTAGHPEAVPLRVKSTESFLNQTDPTTLQY------------------------ 870
Query: 508 ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPE 567
+D++++ + T+ E+ Q +I T + F F +LIDE+ Q E E
Sbjct: 871 -CCLTDDRRF--FRDPTQAELKQHRIIITTTTLSRSLDVPPGF-FSHILIDEAAQMLECE 926
Query: 568 CLIPLVLGAK--QVVLVGDHCQLGPVIMC---KKAARAGLAQSLF-----ERLVLLGLKP 617
+IPL + ++VL GDH Q+ P + +K+A L LF E L
Sbjct: 927 AIIPLAYATRNTRIVLAGDHMQITPKLFSVGDRKSADHTLLNRLFQYYQRENHELAFQSR 986
Query: 618 IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQE 677
+ YR ++ F S +FY + G N Q+SG P P+ F G
Sbjct: 987 VIFHENYRSTKAIISFVSRNFY---VAKG---NPIQASG-QIPGHPEKHPLMFCHVAGTP 1039
Query: 678 EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEG-----QRAYIVNYMSRN 732
E + TS+ NR E V + V F I Y+ ++ +V++ S+
Sbjct: 1040 ERDITMTSWFNRAEIVEVIEKVQEFYS----------IWAYQWNSPDLKQICVVSHGSQV 1089
Query: 733 GALRQQLYK----EIEVASVDSFQGREKDYIILSCVRSNEHQ------GIGFLNDPRRLN 782
LRQ+L K E+ V + ++ GRE IILS V + + + F ++ R LN
Sbjct: 1090 KTLRQELRKKQLGEVAVENFENLPGREFRVIILSTVHTRDSLLSSSVPHLEFFSEARVLN 1149
Query: 783 VALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL-------VEGPLNNLKQSMVQF 835
+TRA+ +V +G+ L + + H+ + EC+ V+ + +KQ +
Sbjct: 1150 TVMTRAQSQVVAVGDAVALCSFGRCSKVWKHFIQ-ECVEMRSVSPVDLTMEQIKQDVAHR 1208
Query: 836 QK 837
Q+
Sbjct: 1209 QR 1210
>gi|15668275|ref|NP_247068.1| DNA-binding protein [Methanocaldococcus jannaschii DSM 2661]
gi|2498043|sp|Q57568.1|Y104_METJA RecName: Full=Uncharacterized ATP-dependent helicase MJ0104
gi|1590880|gb|AAB98084.1| DNA-binding protein, probably DNA helicase [Methanocaldococcus
jannaschii DSM 2661]
Length = 663
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 264/550 (48%), Gaps = 90/550 (16%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPE 390
VD +F RM+ A++ FA ++ YI +LG E + +R + F L
Sbjct: 132 VDLYVNDITFKRMKEALREFARKRDKLA-YI---ILGIEHPEKPLREDIKLEFYDKNL-- 185
Query: 391 LNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
N SQ AVK +VL R + LI GPPGTGKT T ++ K + +VL A SN+A D
Sbjct: 186 -NESQKLAVKKAVLSRDLYLIHGPPGTGKTRTITEVIVQEVKFNKHKVLATADSNIAADN 244
Query: 450 LAEKISAT--GLKVVRLCAKSREAVSSPVEHLTLHYQVR-HLDTSEKSEL-HKLQQLKDE 505
+ E + LKVVR+ +R +S + +L Y + H E L K++++K++
Sbjct: 245 ILEYLIKKYPDLKVVRVGHPTR--ISKDLIQHSLPYLIENHEKYQEILALREKIKEIKEQ 302
Query: 506 QGELSS---------SDEKKYKALKRA--------------------------------- 523
+ + SDE+ K KR
Sbjct: 303 RDKFLKPSPRWRRGMSDEQILKVAKRKKSYRGIPKEKIVSMAEWIIRNKKIKRIINNLDE 362
Query: 524 -TER---EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV 579
TE+ EI ADVI T AG L + F ++IDE +QA EP CLIP+V G K +
Sbjct: 363 ITEKIMNEILAEADVIVATNSMAGSEILKGWEFDVIVIDEGSQAMEPSCLIPIVKGRK-L 421
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSNS 637
++ GDH QL P ++ + L ++LFERL+ I L++QYRM+ + EFP+
Sbjct: 422 IMAGDHKQLPPTVLSENEE---LKKTLFERLIKKYPEFSSI-LEIQYRMNEKIMEFPNKM 477
Query: 638 FYEGTLQ-----NGVT----INERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 688
FY L+ +T + E + +D + P+ F G E SY N
Sbjct: 478 FYNNKLKADESVKNITLLDLVKEEEIDEVDRD-IINEIPVQFINVEGIERKDKESPSYYN 536
Query: 689 RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 748
EA V +IV ++ +P+ VITPY+ Q V Y+ R L ++ +IEV +V
Sbjct: 537 IEEAEKVLEIVKKLVKYK-IPT--NVITPYDAQ----VRYLRR---LFEEHNIDIEVNTV 586
Query: 749 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
D FQGRE + I++S VR+ + GFL D RRLNVA+TRA+ ++++GN +L + ++N
Sbjct: 587 DGFQGRENEAIVISFVRT---KNFGFLKDLRRLNVAITRAKRKLILIGNENLLKQDKVYN 643
Query: 809 GLLTHYKEHE 818
++ K E
Sbjct: 644 EMIKWAKSVE 653
>gi|145509537|ref|XP_001440707.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407935|emb|CAK73310.1| unnamed protein product [Paramecium tetraurelia]
Length = 1517
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 149/502 (29%), Positives = 243/502 (48%), Gaps = 84/502 (16%)
Query: 392 NASQVFAVKSVL--QRPISLIQGPPGTGKT-----VTSAAIVYHMAKQG--QGQVLVCAP 442
N SQ +++ ++ ++ I L+QGPPGTGKT + S A Y + ++L+C P
Sbjct: 849 NKSQANSIREIILKEKGICLVQGPPGTGKTHLLLGLLSGAYEYMKLTNKFPKKKILICTP 908
Query: 443 SNVAVDQLAEKISATG-----------LKVVRLCAKSREAVSSPV------EHLTLHY-- 483
SN A+D++ +I G ++R+ E + S + E L H
Sbjct: 909 SNAAIDEIILRIVQKGGLFDSKGNSRQANLIRIGLLDEENIHSEIIKKVSLEDLAQHKLF 968
Query: 484 ----------------------QVR-HLDTSEKS-------------------ELHKLQQ 501
Q++ H+ EK + + L++
Sbjct: 969 SSKKFNAEQDQKTTAELRIELCQIQTHVKKLEKKLTQHGLPSDERKIIKEQIMQFNDLRK 1028
Query: 502 LKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDE 559
K E E + ++ +K ++ A++I T +G +L+ + + +++DE
Sbjct: 1029 TKQEYLEKTKDSKRFHKEFYNQFCEKLLNDAEIIFSTLSSSGSDKLSKYLDQIELLIVDE 1088
Query: 560 STQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR 619
+ Q TEP +IPL LG K+++L+GD QL + + +SLFER++ +KP
Sbjct: 1089 AAQCTEPSNIIPLRLGIKKMILIGDPKQLPATTFSPVSHQTLYNRSLFERILDNNVKPYF 1148
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEI 679
L +QYRMH + FPS FY+ L++ + N R F NR +F + GQE+
Sbjct: 1149 LDIQYRMHSEIRMFPSEYFYQNKLKDHESTNTRNLPSKFFK----NRVLFLDILDGQEQ- 1203
Query: 680 SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ-IGVITPYEGQRAYIVNYMSRNGALRQQ 738
GTS +N EA + +++ + P+Q IGVI Y+ Q YI + + +
Sbjct: 1204 -KDGTSNINEQEAIVIVQLIKSIKEE--FPTQTIGVICAYKSQVRYIKTLLKQKFQ-DEN 1259
Query: 739 LYKE--IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILG 796
++ E I + +VDSFQG+E+D I+ SCVRS++ GIGFLND RR+NVALTRA+ + ILG
Sbjct: 1260 IFDENTISINTVDSFQGQEEDIILFSCVRSSQTGGIGFLNDGRRMNVALTRAKNALFILG 1319
Query: 797 NPKVLSKQPLWNGLLTHYKEHE 818
N LSK LW +L + ++ +
Sbjct: 1320 NAITLSKSNLWRSMLKNIQQRK 1341
>gi|365764642|gb|EHN06164.1| Hcs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 683
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 176/566 (31%), Positives = 283/566 (50%), Gaps = 65/566 (11%)
Query: 288 SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKST---SFDRMQ 344
S D+ + G V K++ + + + L SQ V + +S ++ K+T +++RM+
Sbjct: 105 SEDSNGEQAECSGVVYKMSXTQ-ITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRME 163
Query: 345 GAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL-PELNASQVFAVKSVL 403
M+ + + + I +L+ E + NT + L P LN SQ A+ +
Sbjct: 164 STMRKLSEISSPIQDKIIQYLVN---ERPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAI 220
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHM-AKQGQGQVLVCAPSNVAVDQLAEKIS--ATGLK 460
+++I GPPGTGKT T ++ + K + ++L+C PSN++VD + E+++
Sbjct: 221 NNDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL 280
Query: 461 VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ----LKDEQGELSSSDEKK 516
++R+ +R S+ L + + + E+ KL Q LK+ + + +E K
Sbjct: 281 LLRIGHPARLLDSNKRHSLDILSKKNTIVKDISQEIDKLIQENKKLKNYKQRKENWNEIK 340
Query: 517 Y--KALKR---ATEREISQSADVICCTCVGAGDPRLA-------NFR-FRQVLIDESTQA 563
K LK+ T +++ + ++ T G+ L NF+ F ++IDE +QA
Sbjct: 341 LLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQA 400
Query: 564 TEPECLIPLVLGAKQ---VVLVGDHCQLGPVIMCK--KAARAGLAQSLFERLVLLGLKPI 618
EP+C IPL+ Q +VL GD+ QL P I + K L +LF+R++ + P
Sbjct: 401 MEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIFPK 458
Query: 619 R-----LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNR----- 666
R L VQYRM+ + EFPS+S Y G L T+ R ID P P+
Sbjct: 459 RDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDDDT 516
Query: 667 --PMFFYVQMGQE------EISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITP 717
P+ +Y G E E + G+ Y N E A V++ + LRS VP + IGVI+P
Sbjct: 517 KIPLIWYDTQGDEFQETADEATILGSKY-NEGEIAIVKEHIEN-LRSFNVPENSIGVISP 574
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q +++ + L +IE+++VD FQGREKD IILS VRSNE +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 778 PRRLNVALTRARYGIVILGNPKVLSK 803
RRLNVA+TR R +V++GN +VL +
Sbjct: 630 ERRLNVAITRPRRQLVVVGNIEVLQR 655
>gi|358385072|gb|EHK22669.1| hypothetical protein TRIVIDRAFT_191377 [Trichoderma virens Gv29-8]
Length = 2021
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 168/550 (30%), Positives = 254/550 (46%), Gaps = 112/550 (20%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQ--------------- 434
LN Q AV + +LIQGPPGTGKT T A+V + +
Sbjct: 1315 LNRGQALAVLGAQENDGFTLIQGPPGTGKTKTIVAMVGSLLSEQLAQAPLAAAGVPLGVP 1374
Query: 435 --------------GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR----------E 470
++LVCAPSN AVD+L ++ +G+K V K+R E
Sbjct: 1375 VRPIGAPAGNQARPKKLLVCAPSNAAVDELVLRLK-SGIKTVN--GKTRNINVLRLGRSE 1431
Query: 471 AVSSPVEHLTLHYQVRHL---DTS------EKSELHK-LQQLKDEQGELS---------- 510
A+++ V+ +TL V+ DT+ ++ +LH+ QLK++ +L
Sbjct: 1432 AINAAVKDVTLDELVKARLEGDTTKDKAKADRDKLHEEAAQLKEQLAQLRPRLDESRNQD 1491
Query: 511 ----------SSDEKKYKAL-----------------------KRATEREISQSADVICC 537
DE K K + +R ++EI SA V+C
Sbjct: 1492 DRSLHNSLSRQFDELKRKQIQIGKQIDANKDSGNSIAREMELRRRQIQQEILNSAHVLCA 1551
Query: 538 TCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCK 595
T G+G N F V+IDE+ Q E LIPL G + +LVGD QL P ++ +
Sbjct: 1552 TLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQ 1611
Query: 596 KAARAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
AAR G QSLF R+ K I L +QYRMHP +S FPS FYE LQ+G + + +
Sbjct: 1612 SAARFGYDQSLFVRMQQNHPKSIHLLDMQYRMHPEISSFPSREFYESQLQDGQDMLQLRQ 1671
Query: 655 SGIDFPWPVPN--RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS---GVVP 709
+ PW P F+ G +E G S +N E ++ F R +
Sbjct: 1672 A----PWHKDTLFAPYRFFDVEGVQEKGRKGQSLVNTRELEVALQMYERFSRDYHECDLT 1727
Query: 710 SQIGVITPYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE 768
+IG+ITPY+ Q + + + +R G + + IE + D+FQGRE + II SCVR++
Sbjct: 1728 RKIGIITPYKAQLYELRSRFQARYG---ENITNIIEFNTTDAFQGRECEIIIFSCVRASA 1784
Query: 769 HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL 828
GIGF+ D RR+NV LTRA+ + ILG+ + L + W L+ ++ + +G + ++
Sbjct: 1785 TGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIVDAQDRDRYTKGDILSM 1844
Query: 829 KQSMVQFQKP 838
+ ++ KP
Sbjct: 1845 FRRPLEKAKP 1854
>gi|289192489|ref|YP_003458430.1| DNA helicase [Methanocaldococcus sp. FS406-22]
gi|288938939|gb|ADC69694.1| DNA helicase [Methanocaldococcus sp. FS406-22]
Length = 647
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 269/552 (48%), Gaps = 94/552 (17%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPE 390
VD +F RM+ A++ FA ++ YI +LG E + +R + F L
Sbjct: 122 VDLYVNDITFKRMKEALREFARKRDKLA-YI---ILGIEHPEKPLRENIKLEFYDKNL-- 175
Query: 391 LNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
N SQ AVK +VL + + LI GPPGTGKT T ++ + + +VL A SN+A D
Sbjct: 176 -NESQKIAVKKAVLSKDLYLIHGPPGTGKTRTITEVIVQEVRFNKHKVLATADSNIAADN 234
Query: 450 LAEKISAT--GLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEK--SELHKLQQLKDE 505
+ E + LKVVR+ +R +S + +L Y + + + ++ S K++++K++
Sbjct: 235 ILEYLIKKYPDLKVVRVGHPTR--ISKDLIQHSLPYLIENHEKYQEILSLREKIKEIKEQ 292
Query: 506 QGELSS---------SDEKKYKALKRA--------------------------------- 523
+ + SDE+ K KR
Sbjct: 293 RDKFLKPSPRWRRGMSDEQILKVAKRKKSYRGIPKEKIISMAEWIIRNRKIKRIINNLDE 352
Query: 524 -TER---EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV 579
TE+ EI ADVI T AG L + F V+IDE +QA EP CLIP+V G K++
Sbjct: 353 ITEKIMNEILSEADVIVSTNSMAGSEILKGWEFDVVVIDEGSQAMEPSCLIPIVKG-KKL 411
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSNS 637
++ GDH QL P ++ + L ++LFERL+ I L++QYRM+ + EFP+
Sbjct: 412 IMAGDHKQLPPTVLSENEE---LKKTLFERLIKKYPEFSSI-LEIQYRMNEKIMEFPNKM 467
Query: 638 FYEG-----------TLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
FY+ TL + V E + D +P F +V+ G E SY
Sbjct: 468 FYDNKLKADESVKNITLLDLVKEEEIDEADRDIINEIP--VQFIHVE-GVERKDKESPSY 524
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EA V ++V ++ +P+ VITPY+ Q V Y+ R + ++ +IEV
Sbjct: 525 YNIEEAEKVLEVVKKLVKYK-IPT--NVITPYDAQ----VRYLRR---MFEEHNIDIEVN 574
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD FQGRE + I++S VR+ + GFL D RRLNVA+TRA+ ++++GN +L + +
Sbjct: 575 TVDGFQGRENEAIVISFVRT---KNFGFLRDLRRLNVAITRAKRKLILIGNEHLLKQDKV 631
Query: 807 WNGLLTHYKEHE 818
+N ++ +E E
Sbjct: 632 YNEMIKWAREVE 643
>gi|148675453|gb|EDL07400.1| mCG23072, isoform CRA_b [Mus musculus]
Length = 2722
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 233/499 (46%), Gaps = 79/499 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ------------- 436
+LN SQ AV+S LQ+ ++IQGPPGTGKTV IVY + Q Q
Sbjct: 2202 KLNQSQDRAVRSALQKQFTVIQGPPGTGKTVVGFHIVYWFHRSNQEQMPTDSSPSGEEQL 2261
Query: 437 ----VLVCAPSNVAVDQLAEKI--SATGLKVVRLCAKSREAVSSP--------------- 475
VL C PSN +VD L + T +K +R+ + EA P
Sbjct: 2262 GGPCVLYCGPSNKSVDVLGGLLLRRKTEMKPLRVYGEQAEATEFPLPGVSNRSLFGKTSQ 2321
Query: 476 -------VEHLTLHYQVRHLDTSEKSELHKLQ-QLKDEQGELSSSDEKKYKALKRATERE 527
+ +TLH+++R +E+ K QL++ G++ S ++ + + L +A + E
Sbjct: 2322 EGRPNQSLRSITLHHRIRQAPNPYAAEIRKFDAQLRE--GKIFSKEDLRVRVLGKARKHE 2379
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAK---QVVLVGD 584
+ + + VI CTC A L RQ+LIDE+ ATEPE LIPLV +K +VVL+GD
Sbjct: 2380 LERHS-VILCTCSCAASKSLKILNVRQILIDEAGMATEPETLIPLVCFSKTVEKVVLLGD 2438
Query: 585 HCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
H QL PV+ ++ G+ +SLFER I L QYRMH + FPS FY G L+
Sbjct: 2439 HKQLRPVVKSEQLQSLGMDRSLFER---YHRDAIMLDTQYRMHKDICSFPSVEFYGGKLK 2495
Query: 645 NGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF-- 702
+ R+ I P+ + F G E+ T N AN E++
Sbjct: 2496 TWSDL--RRLPSILGHTGKPSCSVIFGSVQGHEQKLLVSTEDGNENSRANPEEVTQVVRI 2553
Query: 703 -----LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKD 757
L V P I V+TPY Q A I + + G + V S+ QG E
Sbjct: 2554 IKQLTLDRTVDPKDIAVLTPYNAQAAAISRGLMQRGV------TGVTVTSITKSQGSEWR 2607
Query: 758 YIILS----CVRSNEHQG---------IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ 804
Y+I+S C RS+ Q +GF+ DP ++NVA+TRA+ + I+G+ +L
Sbjct: 2608 YVIVSTVRTCPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCC 2667
Query: 805 PLWNGLLTHYKEHECLVEG 823
PLW+ LL + LV
Sbjct: 2668 PLWHRLLDFCEAQHSLVSA 2686
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 206/526 (39%), Gaps = 81/526 (15%)
Query: 349 TFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQR--- 405
TF +V + HL+ ++ TLP + P N Q AV + R
Sbjct: 477 TFRFWHQAVDALLEEHLVVPDLPA----CTLPHPWPTPPSFRGNHKQKLAVGLIAGRRPE 532
Query: 406 -----PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLK 460
P LI GP GTGKT T A + +Q +VL+C +N A D
Sbjct: 533 GTKHIPPLLIYGPFGTGKTYTLAMAALEVVQQPHTKVLICTHTNSAAD------------ 580
Query: 461 VVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKY 517
+ + + VSS L + Y R ++ + L +D Q
Sbjct: 581 -IYIREYFHDYVSSGHPEATPLRVMYADRPPRQTDPTTLQYCCLTEDRQ----------- 628
Query: 518 KALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL--VLG 575
A + T E+ V+ T A F F + IDE+ Q E E LIPL L
Sbjct: 629 -AFRPPTGPELVHHRLVVTTTSQARELQVPAGF-FSHIFIDEAAQMLECEALIPLSYALS 686
Query: 576 AKQVVLVGDHCQLGPVIMC---KKAARAGLAQSLF-----ERLVLLGLKPIRLQVQYRMH 627
+VVL GDH Q+ P + K+AR L LF E + I YR
Sbjct: 687 LTRVVLAGDHMQVTPRLFSVPRDKSARHTLLHRLFLYYQQEAHKIAQQSRIIFHENYRST 746
Query: 628 PSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 687
++ F S+ FY L G N Q+SG P + P+ F G E S TS+L
Sbjct: 747 AAIINFVSHHFY---LAKG---NPIQASG-KVPRHPQHYPLMFCHVAGSPEQDMSMTSWL 799
Query: 688 NRTEAANV-EKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK----E 742
N E V EK+ + P G P E + V++ ++ ALRQ+L + E
Sbjct: 800 NSAEVTQVVEKVREIY---NTWPHCWG---PREQRHICAVSHGAQVSALRQELRRRNLGE 853
Query: 743 IEVASVDSFQGREKDYIILSCVRS-NEHQGIG-----FLNDPRRLNVALTRARYGIVILG 796
+ V S + GRE ++LS V + N G F +PR LN +TRA+ +V +G
Sbjct: 854 VSVGSFEILPGREFRVVVLSSVHNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVG 913
Query: 797 NPKVLSK----QPLWNGLLTHYKEHECLV--EGPLNNLKQSMVQFQ 836
+ L + LW + EH E L ++Q + Q Q
Sbjct: 914 DAVALCSSGACRNLWRSFIRECIEHHSAFPEELSLEQIEQGVAQRQ 959
>gi|296823782|ref|XP_002850498.1| helicase SEN1 [Arthroderma otae CBS 113480]
gi|238838052|gb|EEQ27714.1| helicase SEN1 [Arthroderma otae CBS 113480]
Length = 1528
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 252/540 (46%), Gaps = 107/540 (19%)
Query: 387 GLPELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIV------------------- 426
G +LN +Q AVKS + +LIQGPPG+GKT T AIV
Sbjct: 644 GTYDLNPAQSKAVKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALLTPILAERRISQPKPT 703
Query: 427 ---YHMAKQG-QGQVLVCAPSNVAVDQLAEKISATGLK----------VVRLCAKSREAV 472
M+K ++LVCAPSN AVD+L + G+K V+RL +A+
Sbjct: 704 SDPAQMSKSTPSKKLLVCAPSNAAVDELVMRFKE-GIKTISGKIQPISVIRLGRS--DAI 760
Query: 473 SSPVEHLTLH-----------------------YQVRHLDTSEK---------------- 493
++ V +TL Y H +TS K
Sbjct: 761 NTNVLDVTLDELVNAKLNQTGQKKNGEERDLQSYFTEHKETSTKFTEIRQRIDQCRARGE 820
Query: 494 ---SELHK-LQQLKDEQGELS----SSDEKKYKA------LKRATEREISQSADVICCTC 539
+EL + LK ++ +LS ++ +K + A +R ++EI A VIC T
Sbjct: 821 PVSTELEREFDLLKRKKAQLSQAIDNARDKNHSAARNAELTRRRIQQEIIDGAHVICSTL 880
Query: 540 VGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
G+G + F V+IDE+ Q+ E LIPL G + VLVGD QL P ++ K+A
Sbjct: 881 SGSGHEMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEA 940
Query: 598 ARAGLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
+R QSLF R+ + L QYRMHP +S+FPS +FY+G LQ+G + +
Sbjct: 941 SRFQYEQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMGPLRKK- 999
Query: 657 IDFPWPVPNR--PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL---RSGVVPSQ 711
PW P F+ G +A G S +N E ++ L ++ +
Sbjct: 1000 ---PWHGSELLGPYRFFDVQGMHSNAAKGHSLVNIAELTVAMRLYDRLLADYKNYDFTGK 1056
Query: 712 IGVITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
IG+ITPY+GQ R + ++ G ++ +E + D+FQGRE + II SCVR++ +
Sbjct: 1057 IGIITPYKGQLRELKARFAAKYGG---SIFTAVEFNTTDAFQGRECEIIIFSCVRASS-R 1112
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
GIGFL+D RR+NV LTRA+ + +LGN + L + W L+ + + EG + + Q
Sbjct: 1113 GIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWRALIHDAQGRDLYTEGDIIRILQ 1172
>gi|242038955|ref|XP_002466872.1| hypothetical protein SORBIDRAFT_01g015520 [Sorghum bicolor]
gi|241920726|gb|EER93870.1| hypothetical protein SORBIDRAFT_01g015520 [Sorghum bicolor]
Length = 650
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 223/446 (50%), Gaps = 26/446 (5%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ L R + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 200 LDDSQKEAISKALGSRDVFLLHGPPGTGKTTTIIEIILQEVKRG-SKILACAASNIAVDN 258
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELHKL--QQLKD 504
+ E+++ K+VRL +R + + S ++ L L + E+ L + LK
Sbjct: 259 IVERLARYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKLLKA 318
Query: 505 EQGELSSSDEKKYKALKRATER-------EISQSADVICCTCVGAGDPRLANFRFRQVLI 557
+ K+ +AL + + ++ ++ADV+ T GA +L F V+I
Sbjct: 319 KDRNTKRDIRKELRALAKEERKRQQLAVTDVLKNADVVLTTLTGASSKKLNGITFDLVVI 378
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP 617
DE+ QA E C I L+ G + +L GDH QL P I +A + G+ ++LFERL +
Sbjct: 379 DEAAQALEVACWIALLKGPR-CILAGDHLQLPPTIQSVEAEKKGMGKTLFERLTEAYGEE 437
Query: 618 I--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID-FPWPVPNRPMFFYVQM 674
I L VQYRMH + + S Y ++ ++ ++ P +
Sbjct: 438 ITSMLTVQYRMHEHIMSWSSKELYNNKIKAHSSVAGHMLYDLEEVTRSSSTEPTIILIDT 497
Query: 675 ---GQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSR 731
EE+ S +N EAA + SGV S IG+ITPY Q + M R
Sbjct: 498 TGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVNASDIGIITPYSAQVTCL--KMMR 555
Query: 732 NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 791
N + K++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 556 N---KDAKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQ 612
Query: 792 IVILGNPKVLSKQPLWNGLLTHYKEH 817
++ + + +S L+ +++E+
Sbjct: 613 CCLVCDVETVSNDRFLKRLVEYFEEN 638
>gi|363750954|ref|XP_003645694.1| hypothetical protein Ecym_3390 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889328|gb|AET38877.1| Hypothetical protein Ecym_3390 [Eremothecium cymbalariae
DBVPG#7215]
Length = 663
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 258/510 (50%), Gaps = 59/510 (11%)
Query: 337 STSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQV 396
S ++ RMQ M+ A E + + I +LL V+ ++++ F L N SQ
Sbjct: 142 SITYKRMQSTMRKLAEIEGTPNNSIIQYLLCQRQFVEQ-KDSIEISFHNQNL---NDSQK 197
Query: 397 FAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISA 456
A+K LQ IS+I GPPGTGKT T ++ + KQGQ ++L+C PSN++VD + E+++
Sbjct: 198 KAIKFALQNEISIIHGPPGTGKTYTLVELIMQLVKQGQ-RILICGPSNISVDTILERLAK 256
Query: 457 T--GLKVVRLCAKSREAVSSPVEHLTLHYQ-------VRHLDTSEKSELHKLQQLKDEQG 507
G ++R +R S+ + + + +R ++ + L ++++ K +
Sbjct: 257 VIPGNLLLRFGHPARLLPSTLAHSIDVISKSGDAGSIIRDINQEINNHLLQIKKFKSYRD 316
Query: 508 ELSSSDEKK--YKALKRATEREISQ---SADVICCTCVGAGDP---RLANFR---FRQVL 556
+ E K K LK+ R IS+ +A V+ CT G+ R+ +F F ++
Sbjct: 317 RKKAWQEIKDLRKELKQRERRVISELILAAKVVVCTLHGSSSGNLCRVYDFEPKLFNTLI 376
Query: 557 IDESTQATEPECLIPLVLGAK----QVVLVGDHCQLGPVIMCK--KAARAGLAQSLFERL 610
IDE +Q+ EP+C IPL+ K ++V+ GD+ QL P I + + + L ++F++L
Sbjct: 377 IDEVSQSLEPQCWIPLISHYKSNISKLVIAGDNKQLPPTIKTEDDEKVKKILGTTIFDKL 436
Query: 611 ---VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNG-----VTINERQSSGIDFPWP 662
K + L VQYRM+ + EFPS+ Y+ L +T+ + +D
Sbjct: 437 ENHYGNDFKKL-LNVQYRMNEQIMEFPSHQLYKDELIAAEAVAKITLADLPGVEVDDNTS 495
Query: 663 VPNRPMFFYVQMGQEEISAS---------GTSYLNRTEAANVEKIVTTFLRSGVVPSQIG 713
VP + ++ G + + S +S N EA + V+ L S V IG
Sbjct: 496 VP---LLWFDTQGDDFLEKSEEVNGVLDIASSKYNENEAYLLIHYVSQLLNSNVSQESIG 552
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
+I+PY Q + + L + Y IE++SVD FQGREKD IILS VRSN+ +G
Sbjct: 553 IISPYNAQVSLL-------RKLVHEKYSLIEISSVDGFQGREKDCIILSLVRSNDLFEVG 605
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSK 803
FL D RRLNVA+TRA+ + ++GN + L +
Sbjct: 606 FLRDERRLNVAMTRAKRQLCVIGNMETLER 635
>gi|198425763|ref|XP_002120492.1| PREDICTED: similar to HELZ protein [Ciona intestinalis]
Length = 2814
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 259/497 (52%), Gaps = 80/497 (16%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSA--AIVYH----MAKQGQGQVLVCAPSN 444
LNA Q V+ L R ++LIQGPPGTGK+ A A +H + + ++L C P+N
Sbjct: 2326 LNAGQAKQVEKALMRKVTLIQGPPGTGKSYMGAQLACYFHEFNRLLGKKDNKILYCGPTN 2385
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSP-----------------VEHLTLHYQVRH 487
AV+ +A + GL+V+R+ + E P ++ ++LH+++R
Sbjct: 2386 KAVNVVAGYLKNAGLRVLRVFGTNAEEEDFPNPLKPVSQKLAEPKSEQLKQMSLHFRIRD 2445
Query: 488 LDTSEKSELHKLQQLKDEQGELSSSDEKKYK----ALKRATEREISQSADVICCTCVGA- 542
+ ++ +E + LK ++ L + K ++ + +A E QS +VI TC+ A
Sbjct: 2446 VRSNPYAE----EILKYDKMFLHFFEYKDFQNFVQVISKAKLWEFKQS-EVIVSTCISAT 2500
Query: 543 --GDPRLAN---------FRFRQVLIDESTQATEPECLIPLVLG-AKQVVLVGDHCQLGP 590
D R+ F+ Q ++DE+ +EPE L P+V A+QVVL+GDH QL P
Sbjct: 2501 QISDARINISKESGKSLPFKVAQCIVDETGMCSEPETLTPIVASQAEQVVLIGDHKQLQP 2560
Query: 591 VIMCKKAARAGLAQSLFERLVLLGLKPI-RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 649
++ CK+A+ GL++S+FERL + L QYRM+ ++ +FPS+ FY G L ++
Sbjct: 2561 IVTCKEASELGLSKSMFERLKNYHKADVGMLTNQYRMNQTICQFPSDHFYGGQLTVDQSV 2620
Query: 650 NERQSSGIDFPWPV------PNRPMFFYVQMGQE----EISASGTSYLNRTEAANVEKIV 699
ER+ + +P P+ N +F +V +G+E ++ G S N+ EA+ V I+
Sbjct: 2621 TERE---LRYP-PLFYHGNQENTAVFCHV-VGEELSGYKMEHRGESKTNKEEASRVILIL 2675
Query: 700 TTFLRSGVVP-SQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
+P S I +++PY+ Q + I + +++ R L K ++V +V + QG E+DY
Sbjct: 2676 RMLHYKLKIPLSDIMILSPYKAQCSLIKDLINK---ARADLNK-VDVGTVVTSQGGERDY 2731
Query: 759 IILSCVRSNEHQGI-------------GFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 805
+ILS VRS + I GF+ D ++NVA+TRAR G+ I+GN +L K P
Sbjct: 2732 VILSTVRSLKSHSIEENPGLHWLRINLGFVADAHQINVAITRARRGLCIVGNKDLLCKDP 2791
Query: 806 -LWNGLLTHYKEHECLV 821
W LL Y++ +V
Sbjct: 2792 ETWRDLLESYEQRRAVV 2808
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 39/284 (13%)
Query: 552 FRQVLIDESTQATEPECLIPLVL---GAKQVVLVGDHCQLGPVIMCKKA---ARAGLAQS 605
F V +DE++Q E E +IPL L +VV+ GDH Q+ + KK AR L
Sbjct: 816 FTHVFLDEASQVMEAEVIIPLTLVLNNKTKVVIAGDHKQICEKVYSKKGGADARFTLLDR 875
Query: 606 LFERLVLLGLKP-------IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
L+++ L K + L+ YR + E S++FY+ + N + R+++ D
Sbjct: 876 LYKKYKELSEKQPTPLQGFVYLRNNYRCVEPILELISSTFYKEHVLNCCS---RKTTPRD 932
Query: 659 FPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGVITP 717
P+ F+ G S + Y N EA I + + + P I V+
Sbjct: 933 LA------PIQFHHIAGTCVQHESTSGYYNEAEAVKTVDIALELVNKYHINPKDIIVLAA 986
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCV------RSNEHQG 771
Y Q I+ + R +LR +++V + S QGRE ++LS V + E
Sbjct: 987 YMEQ-ITIIRSLMRKASLR-----DVKVDRIRSIQGREYRVVLLSSVHRRLSKKDKEGSS 1040
Query: 772 IGFLNDPRRLNVALTRARYGIVILGNPKVLSK----QPLWNGLL 811
G +D LN A+TR I+ +G+ L +P W ++
Sbjct: 1041 FGLFSDVNLLNTAITRCEISIIFVGDAVSLCSMGNCRPKWRNIV 1084
>gi|348505663|ref|XP_003440380.1| PREDICTED: DNA-binding protein SMUBP-2 [Oreochromis niloticus]
Length = 995
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 250/531 (47%), Gaps = 67/531 (12%)
Query: 327 HGFSVDFVWK------STSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLP 380
H F D ++ ++ RM+ A+ T + + L G +T P
Sbjct: 124 HSFDSDALYNLLKLANDVTYKRMKRALNTLNGYNNGPASNLISVLFG---------DTKP 174
Query: 381 RRFGAPGLPE-----LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 434
P E L+ SQ AV L QR +++I GPPGTGKT T I+ K GQ
Sbjct: 175 TSQSQPNKVEFFNSNLDDSQREAVSFALSQRELAVIHGPPGTGKTTTVVEIILQAVKHGQ 234
Query: 435 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQ 484
+VL CAPSNVAVD L E+++ KV+RL +R +A+ + ++ + +
Sbjct: 235 -KVLCCAPSNVAVDNLVERLAQCKAKVLRLGHPARLLESIQKHSLDAILAQSDNANIIAE 293
Query: 485 VRH-LD---TSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCV 540
+R +D T K E + LK E GEL K+ K + A +I +SADV+ T
Sbjct: 294 IRKDIDKAFTGMKKEKGERGNLKREIGEL----RKELKNRETAAIAQILKSADVVLSTNT 349
Query: 541 GAGDPRLANF----RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKK 596
GA D F F V+IDE QA E C I L L A++ +L GD+ QL P I +
Sbjct: 350 GACDDGPLKFLPAEHFDWVVIDECAQALESSCWIAL-LRARKCILAGDYKQLPPTIKSQM 408
Query: 597 AARAGLAQSLFERLV-LLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE--- 651
AA GL+ SL ERL+ + G +R L VQYRM+ ++ ++ S Y+G L ++
Sbjct: 409 AASKGLSLSLMERLIQMYGDSVVRMLTVQYRMNSAIMQWASKEMYQGRLTAHSSVEGHLL 468
Query: 652 RQSSGIDFPWPVPNRPMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVV 708
+ +G+ P+ G E A S N E V+ + +GV
Sbjct: 469 KDLAGVACVEETST-PLLLIDTAGCGLSEMEVADEQSKGNTGEVDIVDLHIKALTEAGVK 527
Query: 709 PSQIGVITPYEGQRAYIVNYMSRNGALRQQL---YKEIEVASVDSFQGREKDYIILSCVR 765
I VI PY Q LRQ+L + E+E+ SVD FQGREK+ ++LS VR
Sbjct: 528 AKDIAVIAPYNLQVDL----------LRQKLSAKHPELEIKSVDGFQGREKEAVVLSLVR 577
Query: 766 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
SN +GFL + RR+NVA+TRAR I ++ + + + L+ H E
Sbjct: 578 SNRKGEVGFLAEDRRINVAVTRARRHIAVVCDTQTVQNHGFLKSLIDHMTE 628
>gi|225558060|gb|EEH06345.1| DEAD-box type RNA helicase [Ajellomyces capsulatus G186AR]
Length = 2150
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 167/535 (31%), Positives = 257/535 (48%), Gaps = 104/535 (19%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM-----AKQG---------- 433
++N +Q AV+S + +LIQGPPG+GKT T A+V + A+Q
Sbjct: 1292 KVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRPGSSGDF 1351
Query: 434 --------QGQVLVCAPSNVAVDQLAEK-----ISATGLK----VVRLCAKSREAVSSPV 476
G++LVCAPSN AVD+L + I+++G K VVRL +A++S V
Sbjct: 1352 RPATRATTSGKLLVCAPSNAAVDELVMRFKEGVITSSGQKHNISVVRLGRS--DAINSNV 1409
Query: 477 EHLTLHYQV--------------RHLDT---------SEKSEL-HKLQQLKDEQGELSSS 512
+TL V + L T ++ +E+ +L Q + + + S
Sbjct: 1410 MDVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQFNEIRERLDQCRAKGQHVPSE 1469
Query: 513 DEKKYKALKRA----------------------------TEREISQSADVICCTCVGAGD 544
E+++ LKR ++EI + VIC T G+G
Sbjct: 1470 LEREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIINGSHVICATLSGSGH 1529
Query: 545 PRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
+ F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A+R
Sbjct: 1530 EMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQY 1589
Query: 603 AQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
QSLF R+ K + L QYRMHP +S FPS +FY+G L++G + + + PW
Sbjct: 1590 EQSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLKDGPDMAKLRVR----PW 1645
Query: 662 PVPNR--PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVIT 716
P F+ G + G S +N E A + + +T + +IG+IT
Sbjct: 1646 HSSELLGPYRFFDVQGLHSSAPKGHSLVNLAELRVAMKLYERLTIDYMTYDFKGKIGIIT 1705
Query: 717 PYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+GQ + N + ++ G ++ +E + D+FQGRE + II SCVR++ ++GIGFL
Sbjct: 1706 PYKGQLREMKNQFANKYG---NSIFTTVEFNTTDAFQGRECEVIIFSCVRAS-NRGIGFL 1761
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
D RR+NV LTRA+ + +LGN + L + WNGL+T + +G + L Q
Sbjct: 1762 ADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQGDILKLLQ 1816
>gi|255086899|ref|XP_002509416.1| predicted protein [Micromonas sp. RCC299]
gi|226524694|gb|ACO70674.1| predicted protein [Micromonas sp. RCC299]
Length = 592
Score = 202 bits (515), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 235/513 (45%), Gaps = 91/513 (17%)
Query: 384 GAPGLPELNASQVFAVKSVLQR--PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
G P + + +Q AV+ L + P+ IQGPPGTGKT I+ GQ +VL CA
Sbjct: 75 GGPIPVDFDPAQQLAVRVALTKTAPVVWIQGPPGTGKTGVVIEIIRRAVASGQ-RVLACA 133
Query: 442 PSNVAVDQLAEKIS----------ATGLKVVRLCAKSREAVSSPVEHLTLHYQV------ 485
PSN AVD L E+++ + VR+ A R +SS +L ++
Sbjct: 134 PSNAAVDNLVERLAKLNTANEQNAGNNIDFVRIGAPER--ISSAALESSLDARIDRETGV 191
Query: 486 ---------RHLD------------------------TSEKSELHKLQQLKDEQGELSSS 512
+ +D S K+ KL L+ EQ L+ S
Sbjct: 192 FFDASRGRKKEIDLAKRQGWKKQEDLQKGKVKGLGDNISAKNIEAKLGDLRREQRTLAKS 251
Query: 513 DEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF-RFRQVLIDESTQATEPECLIP 571
+K ++ EREI A V+ T VGAG + F V++DE+ QATEP IP
Sbjct: 252 GKK----VRANAEREILAEAQVVLATAVGAGAENIQRLPAFDIVILDEAAQATEPAAWIP 307
Query: 572 LVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER----------LVLLGLKPIRLQ 621
LV +K+ VLVGD CQL P++ KA+ GLA L R + G+ L
Sbjct: 308 LVR-SKRAVLVGDPCQLAPLVRSTKASDGGLATPLMARKAPALGAANAYLSSGVLGCVLT 366
Query: 622 VQYRMHPSLSEFPSNSFYEGTLQNGVTINER---QSSGIDFPWPVPNRPMFFYVQMGQEE 678
QYR + +S++ S Y G L + R Q G+ P N P+ +
Sbjct: 367 TQYRSNRLISDWASQEMYGGRLAASERVASRLLSQMPGV-ASTPATNAPLLLLDTRTRAG 425
Query: 679 ISASG----------TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQ----RAY 724
+ +G +S +N EA V V L +GV PS + V +PY Q R
Sbjct: 426 MLLTGCSEVSEMSSSSSLVNEGEAYAVMMHVAGLLGAGVAPSDVAVQSPYAAQVRLIRTK 485
Query: 725 IVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 784
+ + +R A L +EVASVDSFQGRE + +++S VRSN+ Q +GFL D RR NVA
Sbjct: 486 LADVAARGAAPGADL---VEVASVDSFQGREAEAVVISTVRSNDRQSVGFLADVRRANVA 542
Query: 785 LTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+TRAR + I+G+ + P N L++H + +
Sbjct: 543 VTRARRHVCIVGDSVTVGGDPFLNRLMSHMRTN 575
>gi|67901330|ref|XP_680921.1| hypothetical protein AN7652.2 [Aspergillus nidulans FGSC A4]
gi|40742648|gb|EAA61838.1| hypothetical protein AN7652.2 [Aspergillus nidulans FGSC A4]
gi|259483986|tpe|CBF79824.1| TPA: DNA helicase, putative (AFU_orthologue; AFUA_2G01090)
[Aspergillus nidulans FGSC A4]
Length = 686
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 242/500 (48%), Gaps = 77/500 (15%)
Query: 338 TSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQ-MVRNTLPRRFGAPGLPELNASQV 396
+F RM M+ A S + GH VQ P F P LN SQ
Sbjct: 197 VTFRRMNQTMEKMAKMSESDYTHFVRVAFGHTTPVQPDYEAAGPVEFIDP---TLNDSQK 253
Query: 397 FAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS 455
A++ L R I+LI GPPGTGKT T ++ M K+ +VLVC PSN++VD + E+++
Sbjct: 254 EAIQFALASRDIALIHGPPGTGKTHTLIELIIQMVKRNL-RVLVCGPSNISVDNIVERLA 312
Query: 456 ATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEK 515
+ + VVR+ +R S L + Q TS+ + + ++ ++ E E +S K
Sbjct: 313 PSKIPVVRIGHPARLLPSVLDHSLEVLTQ-----TSDAAAI--VRDVRKEIDEKHASIRK 365
Query: 516 -KYKALKRATEREIS------------------QSADVICCTCVGAGDPRLANFRFRQVL 556
++ KRA ++I + + V+ T GAG +L N +F V+
Sbjct: 366 TRFGREKRAIYQDIRELRREFRERESKCVDNLVRGSSVVLATLHGAGGHQLKNQKFDVVI 425
Query: 557 IDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIM-----CKKAARAG---------L 602
IDE++QA E +C IPL L A +VVL GDH QL P + K+A G L
Sbjct: 426 IDEASQALEAQCWIPL-LSAPKVVLAGDHLQLPPTVKSTPHKTKEAGEDGEQDANGSFSL 484
Query: 603 AQSLFERLVLL---GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
++LF+RL+ L G+K + L QYRMH ++ FPS+ YE L ++ R D
Sbjct: 485 EKTLFDRLLSLHGPGIKRM-LTTQYRMHENIMRFPSDELYESKLIAAESVKSRLLK--DL 541
Query: 660 PWPV-----PNRPMFFYVQMG--------QEEISAS----GTSYLNRTEAANVEKIVTTF 702
P+ V P+ F+ G EE + G S N EA V + V
Sbjct: 542 PYNVHETDDTKEPVVFWDTQGGDFPEKVDDEEFAKKESLLGESKSNEMEALVVARHVDNL 601
Query: 703 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 762
+++GV P I VITPY GQ A + + ++ Y ++E+ SVD FQGREK+ +++S
Sbjct: 602 VQAGVRPEDIAVITPYNGQLAVLSQML-------REKYPDLELGSVDGFQGREKEAVVVS 654
Query: 763 CVRSNEHQGIGFLNDPRRLN 782
VRSN +GFL + RRLN
Sbjct: 655 LVRSNSEHEVGFLGEKRRLN 674
>gi|344306310|ref|XP_003421831.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein-like [Loxodonta africana]
Length = 3027
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 158/493 (32%), Positives = 227/493 (46%), Gaps = 70/493 (14%)
Query: 387 GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAK-----------QGQG 435
G +LN SQ AV+ LQ+ ++IQGPPGTGKTV IV+ K QG
Sbjct: 2399 GRHKLNPSQTGAVREALQKQFTVIQGPPGTGKTVVGLHIVFWFHKSNKEPVPTRGTQGSP 2458
Query: 436 QVLVCAPSNVAVDQLAEKISA--TGLKVVRLCAKSREAVSSP------------------ 475
+L C PSN +VD LA + + LK +R+ ++ EA P
Sbjct: 2459 CILYCGPSNKSVDVLAGMLQSWREELKPLRVYSEQAEATEFPGPRVDSRSLPRKTPREGK 2518
Query: 476 ----VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK-ALKRATEREISQ 530
+ +TLH+++R + L + ++ S D YK L++A E+ Q
Sbjct: 2519 PNWNLRSITLHHRIRQAPNPHAAALREFDSRVQKRDRFSEEDIAVYKKTLRQARLFELKQ 2578
Query: 531 SADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVL--GAKQVVLVGDHCQL 588
VI CTC A L + RQVLIDE+ ATEPE LIPLV ++VVL+GDH QL
Sbjct: 2579 HT-VILCTCSCAASGSLRHLDIRQVLIDEAGMATEPETLIPLVHFPEVQKVVLLGDHKQL 2637
Query: 589 GPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVT 648
PV+ + GL +SLFER L QYRMH + FPS FY+G L+
Sbjct: 2638 RPVVKSEHLQNLGLERSLFER---YQSDTYLLDTQYRMHKDICAFPSTEFYKGKLKTWQD 2694
Query: 649 INERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF------ 702
+ R+ I + P+ F G E+ T N AN+E++
Sbjct: 2695 L--RRPPSILGHADKKSCPVIFGYLQGCEQSLLVSTDEGNENSKANLEEVAEVVRIAKQL 2752
Query: 703 -LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
L V P + ++TPY Q A I + R G + V+S+ QG E Y+++
Sbjct: 2753 TLDRTVDPKDVAILTPYNAQVAEISKRLVREGV------TGVTVSSITKSQGSEWRYVLV 2806
Query: 762 SCVRSNE-------------HQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
S VR+ + +GF+ DP ++NVA+TRA+ G+ ++G+ +L PLW
Sbjct: 2807 STVRTCRKSEVDQRPTKSWLKKFLGFVVDPNQVNVAITRAQDGLCLIGDHLLLRCCPLWQ 2866
Query: 809 GLLTHYKEHECLV 821
LL + LV
Sbjct: 2867 RLLDFCDTQQSLV 2879
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 188/460 (40%), Gaps = 65/460 (14%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLC 465
P LI GP GTGKT T A + +Q + +VL+C +N A D + + +
Sbjct: 747 PPLLIYGPFGTGKTYTLAMASLEVIRQPRTKVLICTHTNSAADIYIREYFHSHVT----- 801
Query: 466 AKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATE 525
S ++P L + Y R ++ + L +D +A + T
Sbjct: 802 --SGHPEATP---LRVMYTDRPPSQTDAATLRYCCLTEDR------------RAFRPPTW 844
Query: 526 REISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA--KQVVLVG 583
E+ Q V+ T A F F +LIDE+ Q E E L PL +VVL G
Sbjct: 845 TELQQHRIVVTTTSQARALKVPAGF-FSHILIDEAAQMLECEALTPLRYATPHTRVVLAG 903
Query: 584 DHCQLGPVIMCKKAARAGLAQSLFERL---------VLLGLKPIRLQVQYRMHPSLSEFP 634
DH Q+ P + +++A +L RL V+ I YR +L F
Sbjct: 904 DHLQVTPKLFSVASSQAA-GHTLLNRLFFHYQQETHVVARQSRIVFHENYRSTQALVAFV 962
Query: 635 SNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAAN 694
S FY L G N +SG P + P+ F G E S TS+LN E
Sbjct: 963 SRHFY---LAQG---NPIHASG-RVPRHPQHYPLMFCHVAGTPERDISQTSWLNPAELLQ 1015
Query: 695 -VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK----EIEVASVD 749
VEK+ + P G E + +V++ ++ GALRQ+L + E+ V S +
Sbjct: 1016 VVEKVQEVY---NTWPPCWG---GREQRHICVVSHGAQVGALRQELRRKHLAEVSVGSFE 1069
Query: 750 SFQGREKDYIILSCVRSNEHQ------GIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
GRE ++LS V + + + F + R LN +TRA+ +V +G+ L
Sbjct: 1070 ILPGREFRVVVLSTVHTYDSLRCPGVPSLEFFTEARVLNTVMTRAQSQVVAVGDAVALCS 1129
Query: 804 ----QPLWNGLLTHYKEHE--CLVEGPLNNLKQSMVQFQK 837
LW + EH+ C L ++Q++ Q Q+
Sbjct: 1130 FGNCSRLWKSFIRECVEHQSVCPQGLSLEQIEQNVAQAQR 1169
>gi|296195731|ref|XP_002745520.1| PREDICTED: uncharacterized protein LOC100413039 [Callithrix jacchus]
Length = 2098
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 240/460 (52%), Gaps = 44/460 (9%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + ++L+ + +NVAVD++
Sbjct: 1650 PITIIHGVFGAGKSYLLAVVILFFVQLFEKNEAPNTGNARPWKLLISSSTNVAVDRVLLG 1709
Query: 454 ISATGLK-VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G + VR+ S ++ P+ L Y + +E +L +L L E +L+ +
Sbjct: 1710 LLSLGFENFVRV--GSVRKIAKPI----LPYSLHAGSENESEQLKELHALMKE--DLTPT 1761
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T R + + ++ TC P + + +F V++DE +Q TEP
Sbjct: 1762 ERVYVRKSIEQHKLGTNRTLLKQVRIVGVTCAACPFPCMNDLKFPVVVLDECSQITEPAS 1821
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KP+ L+ QYR
Sbjct: 1822 LLPIARFECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRLCLMGHKPVLLRTQYRC 1881
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP++S ++ FYEG L NGVT ER W +P + FY G E++ S+
Sbjct: 1882 HPAISAIANDMFYEGNLMNGVTEIERSPL---LEW-LPT--LCFYNVKGLEQLERDN-SF 1934
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EAA K++ + + SG+ S IGVIT Y+ Q Y + ++ K ++V+
Sbjct: 1935 HNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQ-MYKLCHLLSTVDFDHPDIKTVQVS 1993
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR + ++I+GN L K L
Sbjct: 1994 TVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGKRHLLIVGNLVCLRKNRL 2050
Query: 807 WNGLLTHYK------EHECLVEGPLNNLKQSMVQFQKPKK 840
W ++ H + +H E LN+L + + Q +K
Sbjct: 2051 WGRVIQHCEGREDGLQHASQYEPQLNHLLKDYFEKQAEEK 2090
>gi|145351793|ref|XP_001420247.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580481|gb|ABO98540.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 464
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 235/468 (50%), Gaps = 70/468 (14%)
Query: 410 IQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS-ATGLKVVRLCAKS 468
IQGPPGTGKT I+ A +G+ +VL CAPSN+AVD L E++ T ++ VR A
Sbjct: 4 IQGPPGTGKTSVVVEIIAQAAARGE-RVLACAPSNLAVDNLVERLDGVTDVRAVRFGAPE 62
Query: 469 R---EAVSSPV-----EHLTLHYQVRHLDTSEKSELHKLQQLKD-----------EQGEL 509
R A+S + E L +Q + +++SE S KL+ L D ++ +L
Sbjct: 63 RISAAALSCSLDAKVSEATELFFQTQRVESSETS--TKLRALMDRYQKATNVPKKQREKL 120
Query: 510 SSSDEKKYKALK----------RATEREISQSADVICCTCVGAGDPRLANFR-FRQVLID 558
S E K LK +A++ +I + A+V+ T GAG + F V++D
Sbjct: 121 QSEIEALKKKLKTTVSAGTKHRKASQAKILREANVVLATNAGAGMDTVQQLPPFDLVVVD 180
Query: 559 ESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV------- 611
E+ QA+EP IPLV G ++ VL+GD CQL PV+ +A AGLA+SL RL+
Sbjct: 181 EAAQASEPLSWIPLVRG-RRAVLIGDPCQLAPVVRSLEAVEAGLARSLMSRLMPAPENLD 239
Query: 612 ------------LLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDF 659
G+ + L QYR H ++S + S Y G L+ ++ R + D
Sbjct: 240 DEDDGWNARAYASSGVLTLTLSTQYRSHETISSWSSREAYGGRLRAAESV--RGALLRDL 297
Query: 660 P----WPVPNRPMFF------YVQMGQE-EISASGTSYLNRTEAANVEKIVTTFLRSGVV 708
P + PM Y ++ E G SY+N EA V L++GV
Sbjct: 298 PGVQDTQITRIPMLMITARSPYGRIPAECNERRVGGSYINEGEATTAAAHVLMMLKAGVR 357
Query: 709 PSQIGVITPYEGQRAYIVNYMSRNGALRQ-QLYKEIEVASVDSFQGREKDYIILSCVRSN 767
S I VI+PY Q + + ++ AL + +E++S+DSFQGRE + +I+S VRSN
Sbjct: 358 ASDIAVISPYAAQVRLLRSVLA--VALEDVEGADAVEISSIDSFQGREAECVIISTVRSN 415
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
+G+GFL+D RR+NVA+TR + + I+G+ K + L+ H +
Sbjct: 416 ARRGVGFLSDNRRMNVAVTRGKRHVTIIGDDKTIMGDAFLRRLVEHIE 463
>gi|429853279|gb|ELA28360.1| helicase sen1 [Colletotrichum gloeosporioides Nara gc5]
Length = 2051
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 235/512 (45%), Gaps = 101/512 (19%)
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMAK---QGQG-------------------QVLVCAPSN 444
+LIQGPPGTGKT T A+V + Q QG ++LVCAPSN
Sbjct: 1345 FTLIQGPPGTGKTKTIVAMVGSLLTGNIQPQGTAIKPKIPAGQANQNAMPKKLLVCAPSN 1404
Query: 445 VAVDQLAEKI-----SATG----LKVVRLCAKSREAVSSPVEHLTLHYQVRHL------- 488
AVD+L ++ + TG + V+RL +A+++ V +TL V+
Sbjct: 1405 AAVDELVLRLKQGVKTMTGSFHKINVLRLG--RSDAINAAVRDVTLDELVKQRLEGDNTG 1462
Query: 489 --DTSEKSELHK-LQQLKDEQGEL--------SSSDEKKYKALKRA-------------- 523
E+ ++HK +++DE +L ++ D +AL+R+
Sbjct: 1463 NKAREEREKMHKDAAKVRDELADLRPKLEEARANGDRNVVQALQRSFDQLKRVQVNIGAK 1522
Query: 524 ---------------------TEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDES 560
++E+ A V+C T G+G N F V+IDE+
Sbjct: 1523 IDEEKASGNTATREAEIRRRQVQQEVLDGAQVLCATLSGSGHEMFKNLNVEFETVIIDEA 1582
Query: 561 TQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIR- 619
Q E LIPL GA + +LVGD QL P ++ + AAR G QSLF R+ I
Sbjct: 1583 AQCVELSALIPLKYGATKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQRNFPNYIHM 1642
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR--PMFFYVQMGQE 677
L QYRMHP +S FPS FYEG L +G + + + PW P F+ G +
Sbjct: 1643 LDRQYRMHPEISRFPSLEFYEGKLVDGDDMADLRRQ----PWHASALLGPYRFFDVEGSQ 1698
Query: 678 EISASGTSYLN----RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNG 733
E G S +N R E+ F R + +IG+ITPY+ Q + R
Sbjct: 1699 EKGNKGRSLVNHAELRVAMQLYERFRADFGRQTDIRGKIGIITPYKAQLQELRYQFGRQY 1758
Query: 734 ALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV 793
+ +IE + D+FQGRE + II SCVR++ GIGF+ D RR+NV LTRA+ +
Sbjct: 1759 G--DGITDDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMQDIRRMNVGLTRAKSSLW 1816
Query: 794 ILGNPKVLSKQPLWNGLLTHYKEHECLVEGPL 825
ILG+ + L + WN L+ + ++ +G +
Sbjct: 1817 ILGDSRALVQGEFWNKLIENARQRALYTKGDI 1848
>gi|358384596|gb|EHK22193.1| hypothetical protein TRIVIDRAFT_149633 [Trichoderma virens Gv29-8]
Length = 1731
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 220/437 (50%), Gaps = 63/437 (14%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQ-GQGQVLVCAPSNVAVDQ 449
LN SQ AV++ + + GPPGTGKT T AI+ + + G++LV AP++ AVD
Sbjct: 1308 LNPSQKAAVEAAQSNKLVCLWGPPGTGKTQTIVAIIRRLQRDPNIGKILVTAPTHNAVDN 1367
Query: 450 LAEK----ISATGLKVVRLCAKSREAVSSP-VEHLTLHYQVRHLDTSEKSELHKLQQLKD 504
+ + IS GL + SP + L + +VR + +L K
Sbjct: 1368 VMRRYLGRISQEGL------------LQSPKMAPLRVATEVRKVG----EDLRKYTCDAL 1411
Query: 505 EQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT 564
E+ SS + A+++A +R ++A++I TC+GAG L + F V++DE++Q T
Sbjct: 1412 AGQEVYSS----HAAMRQAKQR--VKAAEIIFTTCIGAGLGLLRDQVFDTVIVDEASQQT 1465
Query: 565 EPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL-GLKP----IR 619
EP L+PL G ++ +LVGDH QL P + A SLFERL G P +
Sbjct: 1466 EPASLVPLAKGCQKAILVGDHVQLRPTVQ-NIALALDFDVSLFERLYTRDGTTPNMVRVM 1524
Query: 620 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP-------VPNRPMFFYV 672
L QYRMHPS+ F S FYE L +G+ +R FPWP V + P +V
Sbjct: 1525 LDTQYRMHPSICSFISKEFYESKLLSGLRDQDRPMPLSSFPWPASPATSDVTHVPRMIFV 1584
Query: 673 QMGQEEISASGTSYLNRTEAANVEKI-----VTTFLRSGVVP--SQIGVITPYEGQRAYI 725
+ SG L +N E++ + LR+ + I V+TPY Q +
Sbjct: 1585 E-------CSGREDLGHKSKSNKEQVDLCLSICKLLRTARTTNNTSIAVLTPYSRQSELL 1637
Query: 726 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
+S + IE++S+D FQGRE D +I VR NE + IGFL D RR+NVAL
Sbjct: 1638 QRALSG--------IQNIEISSIDGFQGREADIVIFVTVRCNESREIGFLKDLRRMNVAL 1689
Query: 786 TRARYGIVILGNPKVLS 802
TRA+YG++++GN L+
Sbjct: 1690 TRAKYGMIVVGNKATLT 1706
>gi|384498945|gb|EIE89436.1| hypothetical protein RO3G_14147 [Rhizopus delemar RA 99-880]
Length = 608
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 228/451 (50%), Gaps = 52/451 (11%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AV+ L P I+LI GPPGTGKT T I+ H+A + +VLVC PSN++VD
Sbjct: 132 LNDSQKEAVRFALGSPEIALIHGPPGTGKTYTLVEIIRHLAINQKQKVLVCGPSNISVDN 191
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE-KSELHKLQQLKDEQGE 508
L E+++ L+VVR+ +R + + V+H TL R D+ S++ K ++ D +
Sbjct: 192 LVERLAQHRLQVVRVGHPAR-VLPTVVDH-TLDIITRTCDSGRIVSDIRK--EMDDTLAK 247
Query: 509 LSSSD---------------EKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFR 553
+ S K ++ +R E+ +A V T GA + N F
Sbjct: 248 IGKSKNRTERRAMYGLMKDLRKDFRVRERRVIEEVLTNAQVTISTLNGAASRNMMNREFD 307
Query: 554 QVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQL-----GPVIMCKKA--ARAGL---- 602
V+IDE+TQA E EC I L L AK+ +L GDH QL PV + KK R GL
Sbjct: 308 VVIIDEATQALEAECWIAL-LKAKKAILAGDHLQLPPTVKSPVKIGKKMILKRKGLPTDT 366
Query: 603 --AQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
+LF+RL+ + I+ L VQYRMH + EF S YE L ++ E + +
Sbjct: 367 DLTTTLFDRLLSMYNNKIKRMLMVQYRMHQKIMEFSSKELYENKLIADASVAEHVLADLP 426
Query: 659 FPWPVPNRPM-FFYVQMGQEEISASGT-------SYLNRTEAANVEKIVTTFLRSGVVPS 710
N M + +S T S N E + + T L G+
Sbjct: 427 DVESTENTDMPLVIIDTSDTGLSHEVTDDAQEEQSKANELEVELAVRHIKTLLNDGLQQD 486
Query: 711 QIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
QIGVITPY A+ V+ + R +R+ + IEV +VD FQGREK+ I+LS VRSN+
Sbjct: 487 QIGVITPY----AFQVSKLRRE--IREN-WPGIEVGTVDGFQGREKEAILLSLVRSNDIG 539
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
+GFL + RRLNVA+TRA+ + ++ + + L
Sbjct: 540 EVGFLAEKRRLNVAMTRAKRHLCVICDSETL 570
>gi|403275747|ref|XP_003929595.1| PREDICTED: uncharacterized protein LOC101051186 [Saimiri boliviensis
boliviensis]
Length = 2038
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 241/460 (52%), Gaps = 44/460 (9%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + ++L+ + +NVAVD++
Sbjct: 1590 PITIIHGVFGAGKSYLLAVVILFFVQLFEKSEAPNTGNARPWKLLISSSTNVAVDRVLLG 1649
Query: 454 ISATGLK-VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G + VR+ S ++ P+ L Y + +E +L +L L E +L+ +
Sbjct: 1650 LLSLGFENFVRV--GSVRKIAKPI----LPYSLHAGSENESEQLKELHALMKE--DLTPT 1701
Query: 513 DE----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 568
+ K + K T R + + V+ TC P + + +F V++DE +Q TEP
Sbjct: 1702 ERIYVRKSIEQHKLGTNRTLLKQVQVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPAS 1761
Query: 569 LIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRM 626
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KP+ L+ QYR
Sbjct: 1762 LLPIARFECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRLCLMGHKPVLLRTQYRC 1821
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY 686
HP++S ++ FYEG L NGVT ER W +P + FY G E++ S+
Sbjct: 1822 HPAISAIANDMFYEGNLMNGVTEIERSPL---LEW-LPT--LCFYNVKGLEQLERDN-SF 1874
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EAA K++ + + SG+ S IGVIT Y+ Q + + +S + K ++V+
Sbjct: 1875 HNVAEAAFTLKLIQSLIASGIEGSMIGVITLYKSQMYKLCHLLSAVDFDHPDI-KTVQVS 1933
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR + ++I+GN L K L
Sbjct: 1934 TVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGKRHLLIVGNLACLRKNRL 1990
Query: 807 WNGLLTHYK------EHECLVEGPLNNLKQSMVQFQKPKK 840
W ++ H + +H E LN+L + + Q +K
Sbjct: 1991 WGRVIQHCEGREDGLQHASQYEPQLNHLLKDYFEKQAEEK 2030
>gi|323336740|gb|EGA78004.1| Hcs1p [Saccharomyces cerevisiae Vin13]
Length = 683
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 176/566 (31%), Positives = 282/566 (49%), Gaps = 65/566 (11%)
Query: 288 SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKST---SFDRMQ 344
S D+ + G V K+ + ++ + L SQ V + +S ++ K+T +++RM+
Sbjct: 105 SEDSNGEQAECSGVVYKM-SDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRME 163
Query: 345 GAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL-PELNASQVFAVKSVL 403
M+ + + + I +L+ E + NT + L P LN SQ A+ +
Sbjct: 164 STMRKLSEISSPIQDKIIQYLVN---ERPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAI 220
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHM-AKQGQGQVLVCAPSNVAVDQLAEKIS--ATGLK 460
+++I GPPGTGKT T ++ + K + ++L+C PSN++VD + E+++
Sbjct: 221 NNDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL 280
Query: 461 VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ----LKDEQGELSSSDEKK 516
++R+ +R S+ L + + + E+ KL Q LK+ + + +E K
Sbjct: 281 LLRIGHPARLLDSNKRHSLDILSKKNTIVKDISQEIDKLIQENKKLKNYKQRKENWNEIK 340
Query: 517 Y--KALKR---ATEREISQSADVICCTCVGAGDPRLA-------NFR-FRQVLIDESTQA 563
K LK+ T +++ + ++ T G+ L NF+ F ++IDE +QA
Sbjct: 341 LLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELXSLYRDDPNFQLFDTLIIDEVSQA 400
Query: 564 TEPECLIPLVLGAKQ---VVLVGDHCQLGPVIMCK--KAARAGLAQSLFERLVLLGLKPI 618
EP+C IPL+ Q +VL GD+ QL P I + K L +LF+R++ + P
Sbjct: 401 MEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIFPK 458
Query: 619 R-----LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNR----- 666
R L VQYRM+ + EFPS+S Y G L T+ R ID P P+
Sbjct: 459 RDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDDDT 516
Query: 667 --PMFFYVQMGQE------EISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITP 717
P+ +Y G E E + G+ Y N E A V++ + LRS VP + IGVI+P
Sbjct: 517 KIPLIWYDTQGDEFQETADEATILGSKY-NEGEIAIVKEHIEN-LRSFNVPENSIGVISP 574
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q +++ + L +IE+++VD FQGREKD IILS VRSNE +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 778 PRRLNVALTRARYGIVILGNPKVLSK 803
RRLNVA TR R +V++GN +VL +
Sbjct: 630 ERRLNVAXTRPRRQLVVVGNIEVLQR 655
>gi|294877934|ref|XP_002768200.1| DNA-binding protein SMUBP-2, putative [Perkinsus marinus ATCC
50983]
gi|239870397|gb|EER00918.1| DNA-binding protein SMUBP-2, putative [Perkinsus marinus ATCC
50983]
Length = 970
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 246/493 (49%), Gaps = 59/493 (11%)
Query: 375 VRNTLPRRFGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQG 433
V+ +P FG LN Q AV++ L P++L+ GPPGTGKT + + ++
Sbjct: 195 VQEEIPLAFG----DNLNEVQRRAVRTCLDASPLALVHGPPGTGKTTVLVSYILEAIQRH 250
Query: 434 QGQVLVCAPSNVAVDQLAEKISATG--LKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTS 491
Q ++LVCAPSNVAVD L E+++A G VVR+ +R V +E TL ++ D
Sbjct: 251 Q-KLLVCAPSNVAVDNLLERVTAVGGISNVVRIGHPAR--VEKGLERYTLDAKLAQNDQQ 307
Query: 492 E---------KSELHKLQQLKDE------QGELSSSDEKKYKALKRATEREISQSADVIC 536
+ S L K ++ KD QGE+ K+ ++ +R E+ Q + V+
Sbjct: 308 QLVGDIRKEIDSCLKKSKKAKDRGARRAMQGEVREL-RKELRSRERRAVSEVIQQSSVVF 366
Query: 537 CTCVGAGDPRLANFR-----------FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDH 585
TC AG LA F V+IDE+ QA E C IPL+LG ++ VL GDH
Sbjct: 367 STCAAAGGRTLARALENGCGDASTRLFDVVVIDEAAQAIEAACWIPLLLG-RKAVLAGDH 425
Query: 586 CQLGPVIMCKKAARAGLAQSLFERLVLLGLKP----------IRLQVQYRMHPSLSEFPS 635
QL ++ ++AA+ GL ++LF RL+ + K + L QYRM+ ++ + +
Sbjct: 426 KQLAATVLSEEAAKGGLQETLFGRLMEMMEKSTIGEGREMPSVMLTTQYRMNETIMGWSN 485
Query: 636 NSFYEGTLQNGVTINERQSSGI-DFPWP---VPNRPMFFY---VQMGQEEISASGTSYLN 688
FY G L ++ R + + W + +RP+ + V E+ S N
Sbjct: 486 AQFYGGHLLASESVKSRTLQELTERIWADQEMLSRPLLWIDTAVDWMHEDEVGEEESRSN 545
Query: 689 RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 748
E A V K ++ +G+ Q VI+PY Q I + + + + V+SV
Sbjct: 546 SAEVALVAKYISFLRAAGIKRDQTAVISPYNRQVGLIRDALKSSTGETDASF----VSSV 601
Query: 749 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
DS+QG+E++ ++LS VRSN+ +GFL D RRLNVA+TRA+ +V++G+ + + +
Sbjct: 602 DSYQGQEQEVVVLSLVRSNDAGEVGFLKDYRRLNVAVTRAKRQLVLVGDSETIGADDVLV 661
Query: 809 GLLTHYKEHECLV 821
L ++ E ++
Sbjct: 662 TLYSYAAERGFII 674
>gi|325095786|gb|EGC49096.1| helicase SEN1 [Ajellomyces capsulatus H88]
Length = 2150
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 257/535 (48%), Gaps = 104/535 (19%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIVYHM-----AKQG---------- 433
++N +Q AV+S + +LIQGPPG+GKT T A+V + A+Q
Sbjct: 1292 KVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRPGSSGDF 1351
Query: 434 --------QGQVLVCAPSNVAVDQLAEK-----ISATGLK----VVRLCAKSREAVSSPV 476
G++LVCAPSN AVD+L + I+++G K V+RL +A++S V
Sbjct: 1352 RPATRATTSGKLLVCAPSNAAVDELVMRFKEGVITSSGQKHNISVIRLGRS--DAINSNV 1409
Query: 477 EHLTLHYQV--------------RHLDT---------SEKSEL-HKLQQLKDEQGELSSS 512
+TL V + L T ++ +E+ +L Q + + + S
Sbjct: 1410 MDVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQFNEIRERLDQCRAKGQHVPSE 1469
Query: 513 DEKKYKALKRA----------------------------TEREISQSADVICCTCVGAGD 544
E+++ LKR ++EI + VIC T G+G
Sbjct: 1470 LEREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIINGSHVICATLSGSGH 1529
Query: 545 PRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
+ F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A+R
Sbjct: 1530 EMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQY 1589
Query: 603 AQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
QSLF R+ K + L QYRMHP +S FPS +FY+G L++G + + + PW
Sbjct: 1590 EQSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSTAFYDGRLKDGPDMAKLRVR----PW 1645
Query: 662 PVPNR--PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVIT 716
P F+ G + G S +N E A + + +T + +IG+IT
Sbjct: 1646 HSSELLGPYRFFDVQGLHSSAPKGHSLVNLAELRVAMKLYERLTIDYMTYDFKGKIGIIT 1705
Query: 717 PYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+GQ + N + ++ G ++ +E + D+FQGRE + II SCVR++ ++GIGFL
Sbjct: 1706 PYKGQLREMKNQFANKYG---NSIFTTVEFNTTDAFQGRECEVIIFSCVRAS-NRGIGFL 1761
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
D RR+NV LTRA+ + +LGN + L + WNGL+T + +G + L Q
Sbjct: 1762 ADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQGDVLKLLQ 1816
>gi|440299116|gb|ELP91723.1| hypothetical protein EIN_520800 [Entamoeba invadens IP1]
Length = 1079
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 226/455 (49%), Gaps = 63/455 (13%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQL 450
LN SQ+ AV L+ P + G + + Y+ + + V A SN AV+ L
Sbjct: 383 LNLSQIAAV---LKTPSQRFK----RGHKHKRSQVDYNSFEDEDKKFYVTASSNNAVNVL 435
Query: 451 AEKISATGLKVVRLCAKSR-EAVSSPVEHLTLHYQ-------VRHLDTSE------KSEL 496
E++ + V R+ A + E +S V ++L Y+ VR +D + S
Sbjct: 436 TERLVDYKVNVFRIAANDKYEDLSDKVREVSLIYKAYEYAKNVRLVDIEKILKKKIDSFF 495
Query: 497 HKLQQLKDEQGELSSSDE-------KKYKALKRATER-------------EISQSAD--- 533
+ +++K EL+ + + K ++ + TE+ E SQ D
Sbjct: 496 TEKERIKINDMELNYNKDLTLKMHFKTFEKYFKVTEKDLFQRKQLSLNKTETSQMNDFMK 555
Query: 534 ------VICCTCVGAGDPR-LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHC 586
+ C + A + L+ +F LIDE+ Q+ EPE ++V++GD
Sbjct: 556 NNLKNITMNCDVIAATLTKSLSGVKFWCALIDEAAQSIEPETFSAFA-KVNKIVMIGDIQ 614
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNG 646
QL P I+ +A GL +S+FERL+L + + L QY MHP++S+F + FY G L +G
Sbjct: 615 QLPPTILSDEAKEGGLEKSMFERLLLNKVPYVLLNTQYLMHPAISKFSNEFFYRGKLNDG 674
Query: 647 VTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG 706
VT NER + I+ + P+ F G E +SG SY N E V+ +V + + G
Sbjct: 675 VTANERSDNRINKIFSKKEFPVMFVHCKGDEGYGSSGKSYGNDAEKEVVKFLVEKYNKEG 734
Query: 707 VVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS 766
+ +IG+I+PY QR L + +K I+VASVD FQG EK++II+SCVRS
Sbjct: 735 INDEEIGIISPYSTQR-----------DLLGEQHKTIQVASVDGFQGNEKEFIIISCVRS 783
Query: 767 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
N GIGFL D RRLNVALTRAR G+V++G+ L
Sbjct: 784 NSKGGIGFLADHRRLNVALTRARKGLVMVGDAYTL 818
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 143 HACRYCGVSNPACVVRCNVPSCRKWFCNS-RGNTSGSHIVNHLVRAKHKEVCLHKDSPLG 201
H C YC +N +VRC SC K+ CN N S I+ H C H +G
Sbjct: 41 HKCAYCEETNG--LVRC---SCGKYICNGPVTNCSKCQILIHTSN------CNHYAYYIG 89
Query: 202 ETILECYNCGCRNVFLLGF 220
+ECY C N+F++ +
Sbjct: 90 NIKIECYKCKESNIFVIRY 108
>gi|261402463|ref|YP_003246687.1| DNA helicase [Methanocaldococcus vulcanius M7]
gi|261369456|gb|ACX72205.1| DNA helicase [Methanocaldococcus vulcanius M7]
Length = 651
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 168/550 (30%), Positives = 260/550 (47%), Gaps = 90/550 (16%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPE 390
+D +F RM+ A++ FA + + +LG E + +R + +F +
Sbjct: 122 IDLYVNDITFKRMKEALREFA----KRKNKLIYIILGLERPEKPLREDIKIKFYDD---K 174
Query: 391 LNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ AVK +VL + + LI GPPGTGKT T ++ + +VL A SN A D
Sbjct: 175 LNDSQKLAVKRAVLSKDLYLIHGPPGTGKTRTLTEVIVQEVNFNKHKVLATADSNTAADN 234
Query: 450 LAEKISAT--GLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEK--SELHKLQQLKDE 505
+ E + LKVVR+ +R + +EH +L Y + + + ++ S +++Q+K+E
Sbjct: 235 ILEYLVKKYPDLKVVRVGHPTRIS-KDLIEH-SLPYLIENHEKYQEVLSLKERIKQIKEE 292
Query: 506 QGELSS---------SDE----------------------------------KKYKALKR 522
+ + SDE K + L
Sbjct: 293 RDKFLKPSPRWRRGMSDEQILKISKKKKSYRGIPKEKIISMAEWITKNKKIQKIIRNLDD 352
Query: 523 ATER---EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQV 579
TE+ EI ADV+ T AG L ++ F V+IDE +QA EP CLIP+V G K +
Sbjct: 353 LTEKIINEILSEADVVVSTNSMAGSDVLKDWEFDVVVIDEGSQAMEPSCLIPIVKGNK-L 411
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRMHPSLSEFPSNS 637
++ GDH QL P ++ + L ++LFERL+ I L++QYRM+ + EFP+
Sbjct: 412 IMAGDHKQLPPTVLSENKE---LKKTLFERLIKKYPDFSSI-LEIQYRMNEKIMEFPNRM 467
Query: 638 FYEGTLQ-----NGVT----INERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 688
FY+ L+ +T + E + D V P+ F G+E SY N
Sbjct: 468 FYDNKLKADESVKNITLLDLVKEEEIEETD-KSIVNKIPVQFINVEGKERRDKESYSYYN 526
Query: 689 RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 748
EA V IV L+ + I VITPY+ Q Y+ + N ++EV +V
Sbjct: 527 IEEAEQVFDIVKKLLKYRI---PISVITPYDAQVRYLRSMFEENNI-------DVEVNTV 576
Query: 749 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
D FQGRE + I++S VR+ + GFL D RRLNVA+TR + +V++GN +L + ++N
Sbjct: 577 DGFQGRENETIVISFVRT---EKFGFLKDLRRLNVAITRPKRKLVLIGNENLLKQDKIYN 633
Query: 809 GLLTHYKEHE 818
++ K E
Sbjct: 634 EMIKWAKSVE 643
>gi|85090568|ref|XP_958479.1| hypothetical protein NCU07395 [Neurospora crassa OR74A]
gi|28919845|gb|EAA29243.1| hypothetical protein NCU07395 [Neurospora crassa OR74A]
Length = 716
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 151/464 (32%), Positives = 235/464 (50%), Gaps = 60/464 (12%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R I+LI GPPGTGKT T ++ + ++ ++LVC PSN++V
Sbjct: 234 PTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLLRRDL-RILVCGPSNISV 292
Query: 448 DQLAEKISATGLKVVRLCAKSR---EAVSSPVEHLT-------LHYQVRHLDTSEKSELH 497
D + E++S L ++RL +R +S ++ LT + VR ++++ +
Sbjct: 293 DNIVERLSPHKLPILRLGHPARLLPSVLSHSLDILTTTSDAGAIVKDVRAEMDAKQASIR 352
Query: 498 KLQQLKDEQG---ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + EL ++ + +R + +S V+ T GAG +L N F
Sbjct: 353 KTRNGRERRAIYAELKELRKEYRERERRCVSDLVGRSK-VVLATLHGAGGYQLKNEEFDV 411
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVI-------MCKKAARAG--LAQS 605
V+IDE++QA E +C +PL L AK+ VL GDH QL P I K + G L +
Sbjct: 412 VIIDEASQALEAQCWVPL-LWAKKAVLAGDHLQLPPTIKSLNSRAATTKEKKEGQTLETT 470
Query: 606 LFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV 663
LF+RL+ L I+ L QYRMH + FPS+ YE L + ER + +
Sbjct: 471 LFDRLLTLHGPSIKRMLTTQYRMHEKIMRFPSDELYESKLVAAEHVRERLLKDLPYEGVE 530
Query: 664 PN----RPMFFYVQMG-------QEEISASGT-------------SYLNRTEAANVEKIV 699
N P+ F G +EE+ +G+ S N EAA V + V
Sbjct: 531 ANDDTTEPLIFIDTQGGDFPEKNEEELDGNGSTDKKKVIRSLHGESKSNEMEAALVRQHV 590
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
+++GV P I V+TPY Q + + A + + IE+ SVD FQGREK+ +
Sbjct: 591 RGLIKAGVRPDDIAVVTPYNAQLSIL--------APLKDEFPGIELGSVDGFQGREKEAV 642
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
I+S VRSN+ +GFL + RRLNVA+TR + + ++G+ + + K
Sbjct: 643 IVSLVRSNDEGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKK 686
>gi|258573219|ref|XP_002540791.1| DNA helicase [Uncinocarpus reesii 1704]
gi|237901057|gb|EEP75458.1| DNA helicase [Uncinocarpus reesii 1704]
Length = 725
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 232/468 (49%), Gaps = 65/468 (13%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L I+LI GPPGTGKT T ++ + ++ ++LVC PSN++V
Sbjct: 240 PSLNDSQKAAIRFALASHEIALIHGPPGTGKTHTLIELILQLVRRNL-RILVCGPSNISV 298
Query: 448 DQLAEKISATGLKVVRLCAKSREAVSSPVEH-LTLHYQVRHLDTSEKSELHKLQQLKDEQ 506
D + E+++ + +VR+ +R +SS ++H L + Q K +++Q +
Sbjct: 299 DNIVERLAPHKIPLVRIGHPAR-LLSSVLDHSLEVLTQTSDSAAIVKDVRREIEQKQASI 357
Query: 507 GELSSSDEKK--YKALKRAT----ERE------ISQSADVICCTCVGAGDPRLANFRFRQ 554
+ S E++ YK LK ERE + + V+ T G+G +L N +F
Sbjct: 358 RKTRSGRERREIYKDLKELRKEFREREARCVDSLVTGSKVVLATLHGSGGHQLRNQKFDV 417
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVI------MCKKAAR--------- 599
VLIDE++QA E +C +PL L A + +L GDH QL P I + AA+
Sbjct: 418 VLIDEASQALEAQCWVPL-LSASKAILAGDHLQLPPTIKSVTTKISSSAAKPKSFEEDHH 476
Query: 600 ----------AGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
L +LF+RL+ L I+ L QYRMH + FPS+ YE L
Sbjct: 477 ADLSMSKLSIETLETTLFDRLLSLHGADIKRMLTTQYRMHEKIMSFPSSELYESRLIAAD 536
Query: 648 TINERQSSGIDFPWPVPN-----RPMFFYVQMGQEEISASGTSYL-------NRTEAANV 695
+ R D P+ V + P+ FY G E + + L N E A V
Sbjct: 537 HVKARLLR--DLPYEVQDTDDTREPLVFYDTQGDEFPERTEEAELLLADSKSNDLEGAIV 594
Query: 696 EKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGRE 755
+ V + +GVV I VITPY Q A + + ++ Y +E+ SVD FQGRE
Sbjct: 595 ARHVGNLIAAGVVEEDIAVITPYNAQVALLAQLL-------KEKYPGLEIGSVDGFQGRE 647
Query: 756 KDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
K+ +++S VRSN + +GFL + RRLNVA+TR R + + G+ + +S+
Sbjct: 648 KEAVVVSLVRSNPEREVGFLGEKRRLNVAMTRPRRHLCVCGDSETISR 695
>gi|449269034|gb|EMC79843.1| putative helicase senataxin, partial [Columba livia]
Length = 2491
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 252/558 (45%), Gaps = 118/558 (21%)
Query: 384 GAPGLPELNASQVFAVKS----VLQRP----ISLIQGPPGTGKTVTSAAIVYHMAKQGQ- 434
A + E N Q A+++ V Q P I LI GPPGTGK+ T ++ + K+
Sbjct: 1944 AASDMNEYNEDQKRAIETAYAMVKQHPGLPKICLIHGPPGTGKSKTIVGLLSRVLKENTR 2003
Query: 435 --------------GQVLVCAPSNVAVDQLAEKI---------------SATGLKVVRLC 465
+ LVCAPSN AVD+L +KI + + +VRL
Sbjct: 2004 NEKATQKTNSKMKPNRFLVCAPSNAAVDELMKKIITAFKGKCQNKQPLGNCGDITLVRLG 2063
Query: 466 AKSREAVSSPVEHLTLHYQVRHL--------------------------------DTSEK 493
A+ +A++S V +L QV H D EK
Sbjct: 2064 AE--KAINSEVRGFSLDKQVEHRMKRRPADCDQDIQKKKAALDQELDRLSRQRARDRCEK 2121
Query: 494 SELHK--------LQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDP 545
E+ + + +L E+ EL+S K+ + + + +I ADVICCT +G
Sbjct: 2122 REVGRKYQMLAAEISRLAKERQELASQI-KEVRGHSQKVQADIILEADVICCTLSTSGGG 2180
Query: 546 RLANFRFRQ-------VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
L + RQ V++DE+ Q+ E E LIPL+ ++VLVGD QL P + KA
Sbjct: 2181 LLESTFARQRLDPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPPTVKSVKAQ 2240
Query: 599 RAGLAQSLFERL-----------VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGV 647
G SL RL VL L ++L VQYRMHP + FPSN Y TL+
Sbjct: 2241 DYGYDHSLMARLHQHLEQQVQNNVLRSLPVVQLTVQYRMHPDICLFPSNYVYGRTLRTDK 2300
Query: 648 TINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF--LRS 705
E + S WP +P + +G S+ N E V +++ T R
Sbjct: 2301 ATEENRCSS---EWPF--QPYLIF-DVGDSREERDNDSFSNPQEVKLVMELIRTIKEKRK 2354
Query: 706 GVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI---EVASVDSFQGREKDYIILS 762
+ +IG+ITPY Q+ I + R +Y+ EV +VD+FQGREKD II++
Sbjct: 2355 DLGLRRIGIITPYSAQKKKIQEQLDR-------VYRNNSPGEVDTVDAFQGREKDCIIVT 2407
Query: 763 CVRSNEHQG-IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLV 821
CVR+N +G IGFL +RLNV +TRAR+ + ILG K L + WN L+ + ++
Sbjct: 2408 CVRANSTRGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDAQRRGAII 2467
Query: 822 EGPLNNLKQSMVQFQKPK 839
+ + ++ V+ K K
Sbjct: 2468 KTTEISYRKDAVKILKLK 2485
>gi|224029893|gb|ACN34022.1| unknown [Zea mays]
gi|414871609|tpg|DAA50166.1| TPA: hypothetical protein ZEAMMB73_963119 [Zea mays]
Length = 646
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 223/446 (50%), Gaps = 26/446 (5%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ L R + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 196 LDDSQKEAISKALGSRDVFLLHGPPGTGKTTTIIEIILQEVKRG-SKILACAASNIAVDN 254
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 502
+ E+++ K+VRL +R + + S ++ L L + E+ KL +
Sbjct: 255 IVERLARYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKLLKA 314
Query: 503 KDEQGELSSSDEKKYKALKRATEREIS-----QSADVICCTCVGAGDPRLANFRFRQVLI 557
KD + E K A + ++++ ++ADV+ T GA +L F V+I
Sbjct: 315 KDRNTKRDIRKELKTLAKEERKRQQLAVTDVLKNADVVLTTLTGASSKKLNGITFDLVVI 374
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKP 617
DE+ QA E C I L+ G + +L GDH QL P I +A + G+ ++LFERL +
Sbjct: 375 DEAAQALEVACWIALLKGPR-CILAGDHLQLPPTIQSVEAEKKGMGKTLFERLTEAYGEE 433
Query: 618 I--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID-FPWPVPNRPMFFYVQM 674
I L VQYRMH + + S Y ++ ++ ++ P +
Sbjct: 434 ITSMLTVQYRMHEHIMSWSSKELYNNKIKAHSSVAGHMLYDLEEVTRSSSTEPTIVLIDT 493
Query: 675 ---GQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSR 731
EE+ S +N EAA + SGV S IG+ITPY Q + M R
Sbjct: 494 TGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVNASDIGIITPYAAQVTCL--KMMR 551
Query: 732 NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 791
N + K++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 552 N---KDAKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQ 608
Query: 792 IVILGNPKVLSKQPLWNGLLTHYKEH 817
++ + + +S L+ +++E+
Sbjct: 609 CCLVCDVETVSSDRFLKRLVEYFEEN 634
>gi|400602498|gb|EJP70100.1| DNA helicase [Beauveria bassiana ARSEF 2860]
Length = 691
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 231/465 (49%), Gaps = 61/465 (13%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R I+LI GPPGTGKT T ++ + K + +VLVC PSN++V
Sbjct: 208 PTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLIKLNK-RVLVCGPSNISV 266
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E++S + ++RL +R +A++ E + VR ++++ +
Sbjct: 267 DNIVERLSPHKVPILRLGHPARLLPSVVNHSLDALTQTSEAGAIVKDVRAEMDAKQASIK 326
Query: 498 KLQQLKDEQ---GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + K+ + G+L K+Y+ +R + + V+ T GAG +L +F
Sbjct: 327 KTKSGKERRQIYGDLREL-RKEYRERERKCVSHLVGGSKVVLATLHGAGGHQLRAEKFDV 385
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA-------------- 600
V+IDE++QA E +C +PL L A + V GDH QL P I +A +
Sbjct: 386 VIIDEASQALEAQCWVPL-LSANKAVCAGDHLQLPPTIKSSNSAVSLKLKDGTEAKPIKG 444
Query: 601 -GLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
L +LF+RL+ L I+ L QYRMH + FPS+ YE L +N R +
Sbjct: 445 QTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYESKLVAAGAVNARLLKEL 504
Query: 658 DFPWPV---PNRPMFFYVQMGQE----------------EISASGTSYLNRTEAANVEKI 698
+ N P+ F G + ++S G S N EAA V++
Sbjct: 505 AYEVEDNEDTNEPLIFIDTQGGDFPERSEEDDADNPKKGKVSLHGDSKSNEMEAALVQQH 564
Query: 699 VTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDY 758
V+ + +G+ I V+TPY Q A + A ++ + IE+ SVD FQGREK+
Sbjct: 565 VSRLVEAGLRAEDIAVVTPYNAQLAVL--------APLKEKFPGIELGSVDGFQGREKEA 616
Query: 759 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
II+S VRSN +GFL + RRLNVA+TR + + ++G+ + + +
Sbjct: 617 IIVSLVRSNSKGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKR 661
>gi|385305772|gb|EIF49721.1| putative nuclear rna processing factor [Dekkera bruxellensis
AWRI1499]
Length = 1066
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 246/522 (47%), Gaps = 103/522 (19%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYH------MAKQG--------- 433
++N SQ A+ + + SLIQGPPGTGKT T ++ H +A+ G
Sbjct: 396 DVNDSQAVAIAGAVHKEGFSLIQGPPGTGKTKTILGVIGHFLTRMAVARNGSHPIQMPXQ 455
Query: 434 -------QGQVLVCAPSNVAVDQLAEKI-----SATGL----KVVRLCAKSREAVSSPVE 477
++LVCAPSN AVD+L ++ ++ G+ ++VRL +A++ V+
Sbjct: 456 QVXRSKEHRRILVCAPSNAAVDELVLRLMRGIKNSKGVIFKPRLVRLGRT--DAINEQVK 513
Query: 478 HLTLHY-------QVRHLDTS-----------EKSELH------------------KLQQ 501
+TL V +D + E+ EL +LQ
Sbjct: 514 GITLEELVDSKLSSVEKIDDNAIREQHRKCIMERDELREKLDSGKLPEXEIAKAEMRLQD 573
Query: 502 LKDEQGELSSS-DEKKYKALKRATEREISQ---------SADVICCTCVGAGDPRLAN-- 549
+ ++ EL DE + K REI + A+V+C T G+ LA+
Sbjct: 574 VVQKRRELGKKLDEIREKRSVSYRNREIERRNIQFKILNDAEVVCSTLSGSAHDVLASMS 633
Query: 550 FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 609
F V+IDE+ Q TE +IPL G + V+VGD QL P ++ +KAA QSLF R
Sbjct: 634 LTFDTVVIDEAAQCTELSAIIPLRYGCTKCVMVGDPNQLPPTVLSQKAASYKYEQSLFVR 693
Query: 610 LVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 668
+ + L VQYRMHP +S FPS FY L +G + E S PW P
Sbjct: 694 IQNNHKXSVYLLNVQYRMHPEISMFPSKEFYHSRLLDGPNMAENNSK----PWNSLYGPY 749
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR-------SGVVPSQIGVITPYEGQ 721
F+ G EE + + S N TEA+ ++V +G+V G+I+PY+ Q
Sbjct: 750 RFFDVKGAEEQNEATKSVFNYTEASLALELVEDLFEKFSEINWAGLV----GIISPYKEQ 805
Query: 722 RAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 780
+ +++R G + + +I+ +VD FQG+EK+ I+ SCV + H GIGFL D RR
Sbjct: 806 VKLLKKLFINRFGRI---ITTQIDFNTVDGFQGQEKEVIVFSCVXAENHTGIGFLADIRR 862
Query: 781 LNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVE 822
+NVALTRAR + ILG+ L W L+ + E LVE
Sbjct: 863 MNVALTRARSSLWILGSKXALVNNKTWRDLIENATERH-LVE 903
>gi|145348783|ref|XP_001418823.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579053|gb|ABO97116.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 609
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 229/458 (50%), Gaps = 44/458 (9%)
Query: 391 LNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ASQ A++ L+ +LI GPPGTGKT V +G +VL C SN+A+D
Sbjct: 156 LDASQRGAIEHALRCVDFALIHGPPGTGKTTAVVEYVAQEVARGS-RVLACTASNIAIDN 214
Query: 450 LAEKISATGL------KVVRLCAKSR---EAVSSPVEHLTLHYQVRHL--DTSEKSEL-- 496
L E++ L ++VR+ +R +++ +E L L D +++S++
Sbjct: 215 LVERLMKIKLPEGGEMRLVRVGHPARLLPSVLAASLEAQLLASDNSKLAKDCAKESKILR 274
Query: 497 HKLQQLKDEQGELSSSD--------EKKYKALKRATEREISQSADVICCTCVGAGDPRLA 548
KL +L D + + ++ K+ + ++A R++ A V+C T GA L
Sbjct: 275 RKLLKLNDRKDRVERNEVRKELRVLAKEERNRQKAAMRDVVDGARVVCSTLSGALSGTLK 334
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
F V+IDE+ QA E C VL K+ VL GDH QL P ++ +A GL+ +LF+
Sbjct: 335 FQDFDVVVIDEAAQALEAACW-GAVLKGKKTVLAGDHLQLPPTVISDEAQAKGLSDTLFQ 393
Query: 609 RL--VLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ--NGVTINERQSSGIDFPWPVP 664
RL + L L VQYRMH + + S + Y+G L V + + G D P
Sbjct: 394 RLHDMYGDLVARMLTVQYRMHADIMTWSSEAMYQGKLTAAESVATHRLRGDGEDDP---- 449
Query: 665 NRPMFFYVQMG----QEEISASGTSYLNRTEAANVEKIVTTFL-RSGVVPSQIGVITPYE 719
P+ + E + G S N EAA V ++V + R V IGVITPY
Sbjct: 450 --PVLLLIDTAGCDMDERVEEDGESKENPDEAAVVMEVVRRLVARHDVAVDDIGVITPYN 507
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 779
GQ + +R+ AL K +EV++VD FQGREK+ II+S VRSN +GFL+D R
Sbjct: 508 GQVTVLRELRARDDAL-----KNLEVSTVDGFQGREKEAIIISAVRSNASGEVGFLSDSR 562
Query: 780 RLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
R+NVA+TRAR ++ + +S L+ +++ H
Sbjct: 563 RMNVAVTRARKHCCLIIDSDTVSSDRFLATLVEYFETH 600
>gi|334331219|ref|XP_001365512.2| PREDICTED: hypothetical protein LOC100011548 [Monodelphis domestica]
Length = 2017
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 158/504 (31%), Positives = 250/504 (49%), Gaps = 68/504 (13%)
Query: 363 HHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQR----------------P 406
H LL E +Q+ T+ +LN Q A+ + Q P
Sbjct: 1508 HELLNPEATLQLANETIQTY-------KLNMDQATALIQIAQMMASHDDGSDLGEQPTLP 1560
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEKI 454
I++I G G GK+ A ++ + + + ++L+ + +NVAVD++ +
Sbjct: 1561 ITIIHGVFGAGKSYLLATVILFLVQLFEKSPPPMGKDARPWKILISSSTNVAVDRVLLGL 1620
Query: 455 SATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSD 513
+ G K +R+ S +S P+ +LH + +E +L +L L E +L+ +
Sbjct: 1621 LSLGFEKFIRV--GSIRKISKPILPYSLHAGL----GNENEQLKELHALMKE--DLTPVE 1672
Query: 514 E----KKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECL 569
+ K + K T R + V+ TC P + + +F VL+DE +Q TEP L
Sbjct: 1673 KIYVRKSIEQHKLGTNRALLHQVQVVGITCAACPFPCMNSLKFPIVLLDECSQMTEPASL 1732
Query: 570 IPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRMH 627
+P+ +++VLVGD QL P I ++A GL Q+LF+RL L+G K I L+ QYR H
Sbjct: 1733 LPIARFDCEKLVLVGDPKQLPPTIQGSESAHDNGLEQTLFDRLCLMGHKAILLRTQYRCH 1792
Query: 628 PSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 687
P++S ++ FYEG L NG++ ER W +P + FY G E+I S+
Sbjct: 1793 PAISAIANDLFYEGNLINGISETERSPL---LEW-LPT--LCFYNVKGIEQIERDN-SFH 1845
Query: 688 NRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS 747
N EAA K++ + + SG+ S IGVIT Y+ Q + S L K ++V++
Sbjct: 1846 NVAEAAFTLKLIQSLIASGIEGSMIGVITLYKSQMYKLCTLFSTVHCDHPSL-KVVQVST 1904
Query: 748 VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 807
VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR + ++I+GN L K LW
Sbjct: 1905 VDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGKRHLLIVGNLDCLKKNRLW 1961
Query: 808 NGLLTHYKEHECLVEGPLNNLKQS 831
++ H EG N L+ S
Sbjct: 1962 GRVIQH-------CEGRKNGLQHS 1978
>gi|310790786|gb|EFQ26319.1| hypothetical protein GLRG_01463 [Glomerella graminicola M1.001]
Length = 690
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 150/468 (32%), Positives = 231/468 (49%), Gaps = 66/468 (14%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R ++LI GPPGTGKT T ++ + K ++LVC PSN++V
Sbjct: 207 PSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQLIKLDL-RILVCGPSNISV 265
Query: 448 DQLAEKISATGLKVVRL----------CAKSREAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + ++RL A S + ++ E + VR ++++ +
Sbjct: 266 DNIVERLAPHKIPILRLGHPARLLPSVLAHSLDVLTQTSEAGAIVKDVRAEMDAKQASIK 325
Query: 498 KLQQLKDEQ---GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++++ +L ++ + +R I +S V+ T GAG +L + RF
Sbjct: 326 KTRNGREKRQIYADLKELRKEFRERERRCVSNLIRES-KVVLATLHGAGGHQLRDQRFDI 384
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC----------------KKAA 598
V+IDE++QA E +C +PL L AK+ V GDH QL P I K+
Sbjct: 385 VIIDEASQALEAQCWVPL-LSAKKAVCAGDHLQLPPTIKSLNYRVKAAAVSEDGAEKQIK 443
Query: 599 RAGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
L +LF+RL+ L I+ L QYRMH + FPS+ YEG L + R
Sbjct: 444 SMTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYEGRLIAAEAVRGRLLK- 502
Query: 657 IDFPWPV-----PNRPMFFYVQMG----------------QEEISASGTSYLNRTEAANV 695
D P+ V N P+ F G + + S G S N EAA V
Sbjct: 503 -DLPYEVRDTEDTNEPLVFIDTQGGDYPEKNEDDDKDAIKKAKFSLHGESKSNEMEAALV 561
Query: 696 EKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGRE 755
+ + +GV P I V+TPY Q A + L++QL IE+ SVD FQGRE
Sbjct: 562 RQHAQKLVDAGVKPEDIAVVTPYNAQLAVL-------APLKEQL-PGIELGSVDGFQGRE 613
Query: 756 KDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
K+ +I+S VRSN H +GFL + RRLNVA+TR + + ++G+ + + +
Sbjct: 614 KEAVIVSLVRSNSHGEVGFLGEQRRLNVAMTRPKRSLTVIGDSETVKR 661
>gi|410908195|ref|XP_003967576.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Takifugu rubripes]
Length = 998
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 263/568 (46%), Gaps = 55/568 (9%)
Query: 279 PGDELRLRYSGDAAHPAWQSVGHVIKLT-AQEEVALELRASQGVPVDINHGFSVDFVWKS 337
PGD + L +G + + G V +++ A VA + G+ D + +++ +
Sbjct: 82 PGDIVGLYDTGGCSADSQVGTGIVTRVSQASVSVAFD-DTKDGISFDTDALYNLLKLAND 140
Query: 338 TSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPE-----LN 392
++ RM+ A+ +G + + L G T P F E L+
Sbjct: 141 VTYKRMKKALNELNSYSNGPAGNLINVLFGE---------TKPSCFSQSNETEFFNKNLD 191
Query: 393 ASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLA 451
SQ AV L QR +++I GPPGTGKT T I+ KQGQ +VL CAPSNVAVD L
Sbjct: 192 DSQREAVTFALTQRDLAVIHGPPGTGKTTTVVEIILQAVKQGQ-KVLCCAPSNVAVDNLV 250
Query: 452 EKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 501
E+++ +KV+RL +R +A+ + + + +R L K+
Sbjct: 251 ERLAQCKIKVLRLGHPARLLESIQKHSLDAIIAQSSNADIISDIRKDIDKAFVGLKKMHN 310
Query: 502 LKDEQGELSSSDEKKYKALKRATEREISQ---SADVICCTCVGAGDPRLANF----RFRQ 554
K E+ + K LK I+Q SADV+ T GA D F F
Sbjct: 311 -KGERASFKREITELRKELKSRETTAITQILKSADVVLSTNTGACDDGPLKFLPAEHFDW 369
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LL 613
V+IDE QA E C I L L A++ VL GD+ QL P I +KAA GL+ SL ERL+ +
Sbjct: 370 VVIDECAQALESSCWIAL-LRARKCVLAGDYKQLPPTIKSQKAAVKGLSVSLMERLIQMY 428
Query: 614 GLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV----PNRPM 668
G +R L VQYRM+ ++ E+ S+ Y+G L ++ D P + M
Sbjct: 429 GDTVVRMLTVQYRMNGAIMEWASDQMYQGKLTAHSSVESHLLK--DLPGVACVEETSTSM 486
Query: 669 FFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYI 725
G E A S N E V + +G+ I VI PY Q
Sbjct: 487 LLIDTAGCGLNEMEVADEQSKGNEGEVDIVALHIKALTEAGLKAKDIAVIAPYNLQ---- 542
Query: 726 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
V+ + + ++R + +E+ SVD FQGREK+ ++LS VRSN +GFL + RR+NVA+
Sbjct: 543 VDLLRQRLSVR---HPALEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAV 599
Query: 786 TRARYGIVILGNPKVLSKQPLWNGLLTH 813
TRAR I I+ + + + L+ H
Sbjct: 600 TRARRHIAIVCDTRTVQNHAFLKSLIDH 627
>gi|426252598|ref|XP_004019993.1| PREDICTED: DNA-binding protein SMUBP-2 [Ovis aries]
Length = 874
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 235/462 (50%), Gaps = 51/462 (11%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P L+ASQ AV L Q+ +++I GPPGTGKT T I+ K+G +VL CAPSNVAV
Sbjct: 176 PALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRG-SKVLCCAPSNVAV 234
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D L E+++ +++RL +R +AV + + + +R D + +
Sbjct: 235 DNLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDGARIVADIRR-DIDQAWAKN 293
Query: 498 KLQQLKDEQGELSSSDEKKYKALKRATEREISQS---ADVICCTCVGAGD----PRLANF 550
+ Q K E+ + K LK E + +S A VI T GA L +
Sbjct: 294 RKTQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAASVILATNTGASADGPLKLLPDG 353
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
F V+IDE QA E C IPL L A++ +L GDH QL P I+ KAA AGL+ SL ERL
Sbjct: 354 HFDVVVIDECAQALEASCWIPL-LKARKCILAGDHKQLPPTIVSHKAALAGLSLSLMERL 412
Query: 611 VLL-GLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQN-------------GVTINERQSS 655
G +R L VQYRMH +++ + S + Y G L GV E +
Sbjct: 413 AERHGAGAVRMLTVQYRMHQAIARWASEALYHGQLTAHPSVAGHLLRDLPGVAATE--ET 470
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
G+ P + + +++ +++ + G R +V+ +V +GV + I VI
Sbjct: 471 GV--PLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGLHVQALVD----AGVRAADIAVI 524
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPY Q V+ + +N A R + E+E+ SVD FQGREK+ +ILS VRSN +GFL
Sbjct: 525 TPYNLQ----VDLLRQNLAHR---HPELEIRSVDGFQGREKEAVILSFVRSNRKGEVGFL 577
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+ RR+NVA+TRAR + ++ + + +S L+ + EH
Sbjct: 578 AEDRRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDYLTEH 619
>gi|345789822|ref|XP_543098.3| PREDICTED: LOW QUALITY PROTEIN: peroxisomal proliferator-activated
receptor A-interacting complex 285 kDa protein [Canis
lupus familiaris]
Length = 2945
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 235/504 (46%), Gaps = 78/504 (15%)
Query: 383 FGAPGLPE-LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ----- 436
F PG P LN SQ AV++ L++ ++IQGPPGTGKTV + IV+ K + Q
Sbjct: 2421 FDLPGGPHTLNRSQNRAVRAALKKQFTVIQGPPGTGKTVVAFHIVFWFHKSNEEQTGACD 2480
Query: 437 -----------VLVCAPSNVAVDQLAEKISA--TGLKVVRLCAKSREAVSSPV------- 476
+L C PSN +VD LA + + LK +R+ ++ EA PV
Sbjct: 2481 TPREKQLGGPCILYCGPSNKSVDVLAGLLLSRRAELKPLRVYSEQAEATEFPVPGVGSRG 2540
Query: 477 ---------------EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGE-LSSSDEKKYKA- 519
+TLH++VR ++ + ++GE LS D YK
Sbjct: 2541 LPKKSPREGRPNQTLRSITLHHRVRQSSNPYAPDIRDFDA-RLQKGEILSKEDLSWYKTI 2599
Query: 520 LKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVL--GAK 577
L +A + E+ Q VI CTC A L RQ+LIDE+ ATEPE LIPLV A+
Sbjct: 2600 LGKARKFELDQH-RVILCTCSCAASASLRKLDVRQILIDEAGMATEPETLIPLVAFSKAE 2658
Query: 578 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNS 637
+VVL+GDH QL PV+ ++ GL +SLFER + L QYRMH + FPS
Sbjct: 2659 KVVLLGDHKQLRPVVKNEQLQNLGLDRSLFER---YHVDAHMLDTQYRMHEGICAFPSME 2715
Query: 638 FYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEK 697
FYE L+ + R S + +F +VQ G E+ T N AN E+
Sbjct: 2716 FYEKKLKTWQGLR-RPPSILGHIGKESCSVIFGHVQ-GHEQSLLVSTDEGNENSKANPEE 2773
Query: 698 IVTTF-------LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 750
+ L V P + ++TPY Q A I + R G + V S+
Sbjct: 2774 VAAVVRIAKQLTLGRTVEPKDVAILTPYNAQAAEISKRLVREGV------SGVTVCSITK 2827
Query: 751 FQGREKDYIILSCVRSNEHQG-------------IGFLNDPRRLNVALTRARYGIVILGN 797
QG E Y+++S VR+ + +GF+ DP ++NVA+TRAR G+ ++G+
Sbjct: 2828 SQGSEWRYVLVSTVRTCQESDLDQRPTKSWLKRFLGFVVDPNQVNVAITRAREGLCVIGD 2887
Query: 798 PKVLSKQPLWNGLLTHYKEHECLV 821
++LS PLW L + LV
Sbjct: 2888 HRLLSCCPLWRRFLDFCEAQRSLV 2911
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 200/464 (43%), Gaps = 67/464 (14%)
Query: 404 QRPIS--LIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKV 461
+RPI+ LI GP GTGKT T A + +Q +VL+C +N A D E+ +
Sbjct: 768 RRPIAPLLIYGPFGTGKTYTLAMASLEVIRQPHTKVLICTHTNSAADIYIEEHFHGYVS- 826
Query: 462 VRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALK 521
S ++P L + Y R ++ + L Q + D + ++A
Sbjct: 827 ------SGHPEAAP---LRVMYTDRPPSQTDATVL---------QYCCLTQDRRAFRAPT 868
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA--KQV 579
RA E+ Q ++ T A + R+ F +LIDE+ Q E E L PL A +V
Sbjct: 869 RA---ELEQH-RIVVTTTSQARELRVPAGFFSHILIDEAAQMLECEALTPLRYAAPGTRV 924
Query: 580 VLVGDHCQLGPVIMCKKAARAGLAQSLFERLV---------LLGLKPIRLQVQYRMHPSL 630
VL GDH Q+ P + A+A +L RL + + YR ++
Sbjct: 925 VLAGDHMQVTPRLFSVPRAQAA-GHTLLYRLFQHYQREAHEVAQRSRLIFHQNYRSTEAI 983
Query: 631 SEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRT 690
F S FY + G I+ +SG P P + MF +V G E S TS+LN
Sbjct: 984 LSFVSRHFY---VAKGSPIH---ASGRVPPHPRLHPLMFCHV-AGNPERDLSSTSWLNAA 1036
Query: 691 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK----EIEVA 746
E A V + V L G PS G E + +V++ ++ ALRQ+L K ++ V
Sbjct: 1037 EVAQVVEQVRD-LHDGW-PSCWGA---REQKHICVVSHGAQVTALRQELRKRNLGQVSVG 1091
Query: 747 SVDSFQGREKDYIILSCVRSNEHQ-------GIGFLNDPRRLNVALTRARYGIVILGNPK 799
S + GRE ++LS V N H +GF D R LN +TRA+ +V +GN
Sbjct: 1092 SFEILPGREFRVVVLSTVH-NHHSLLSSGTASLGFFTDARVLNTIMTRAQSQVVAVGNAL 1150
Query: 800 VLSK----QPLWNGLLTHYKEHE--CLVEGPLNNLKQSMVQFQK 837
L LW + +H C L +++Q ++Q Q+
Sbjct: 1151 ALCSSGACSKLWKSFIRECVKHHSVCPESLSLEHIEQGVLQQQR 1194
>gi|327284018|ref|XP_003226736.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein-like [Anolis carolinensis]
Length = 2825
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 227/491 (46%), Gaps = 72/491 (14%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAK----------------QG 433
+LN SQ AV L++ +LIQGPPGTGKTV IVY + +
Sbjct: 2330 QLNPSQSRAVSEALRKAFTLIQGPPGTGKTVVGTHIVYWFHQLNLERQEKEPTLDDRDKA 2389
Query: 434 QGQVLVCAPSNVAVDQLAEKI-SATGLKVVRLCAKSREAVSSP----------------- 475
+ +L C PSN +VD +A + GL+ +R+ ++ E++ P
Sbjct: 2390 KSHILYCGPSNKSVDVVAGMLMKIRGLRPLRVYGETIESMEFPYPGSSLNISRKSQRESK 2449
Query: 476 ----VEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQS 531
+ +TLH+ +RH SE+ +++ + ++YK L + +
Sbjct: 2450 PDPEIRRITLHHVIRHPSRPYSSEICAFDARVKRGDQITDEEVEQYKQLLNKARKLELEC 2509
Query: 532 ADVICCTCVGAGDPRLANF-RFRQVLIDESTQATEPECLIPLV--LGAKQVVLVGDHCQL 588
DVI CTC + L F RQVL+DE +TEPE LIPLV ++VVL+GDH QL
Sbjct: 2510 HDVILCTCSASSGNNLKQFLNVRQVLVDECAMSTEPETLIPLVSYKTIEKVVLLGDHQQL 2569
Query: 589 GPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVT 648
PV+ G+ SLFER + L +QYRMH + FPS +FY L+
Sbjct: 2570 RPVVHIDMCKAMGMETSLFERY---KDEAFMLTIQYRMHCDICVFPSEAFYGNRLKTCPY 2626
Query: 649 INERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF------ 702
+ +R +S + +F +++ G+E+ T N AN+E++
Sbjct: 2627 L-KRAASTLFHRGRSSCAIIFGHIE-GKEKSLMVSTEEGNENSRANLEEVQQVVRIAKQL 2684
Query: 703 -LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIIL 761
L P ++ ++TPY Q + +SR G I V ++ QG E Y+I+
Sbjct: 2685 TLDMTTRPEEVAILTPYNAQVMEVKKLLSREG------LPNITVCTIMKSQGSEWKYVIM 2738
Query: 762 SCVRSN-------------EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 808
S VRS +++ +GF+ D ++NVA+TRA+ G+ I+GN +L LW
Sbjct: 2739 STVRSCSRSDIDIKPTKSWQNKNLGFVCDQNQINVAITRAQEGLCIIGNSYLLESNALWR 2798
Query: 809 GLLTHYKEHEC 819
LL HYK C
Sbjct: 2799 RLLQHYKMQRC 2809
Score = 103 bits (256), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 134/533 (25%), Positives = 221/533 (41%), Gaps = 100/533 (18%)
Query: 362 YHHLLGHEVEVQMVRNTL--------PRRFGAPGLPELNASQVFAVKSVL--------QR 405
+HH + +V++V + PR+ +P L N Q A+ ++ Q
Sbjct: 723 WHHAVDTICDVRLVLPDVAACSIPQSPRQSLSPLLQRGNDKQKKALSFIIGEVASGKRQV 782
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD-----QLAEKISATGLK 460
P LI GP GTGKT T A + KQ +VL+C +N A D + +++ +
Sbjct: 783 PPLLIYGPFGTGKTFTLAMATLEIIKQPGTRVLICTHTNSAADIYIHEYFNDYVTSGHPE 842
Query: 461 VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKAL 520
V L K + +TL Y + LS + + +
Sbjct: 843 AVPLRIKYTGRSVKATDPITLRYCL-----------------------LSPAGD----SF 875
Query: 521 KRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGA--KQ 578
+ T+ E+ Q VI T + + D L F +LIDE+ Q E E L+PL L +
Sbjct: 876 RLPTKEELDQFRIVIT-TSMLSQDLGLPAGYFSHILIDEAAQMLECEALVPLSLATLETR 934
Query: 579 VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL--------LGLKP-IRLQVQYRMHPS 629
++L GDH Q+ P + C + +L RL + LK I YR PS
Sbjct: 935 IILAGDHMQVTPKLFCLRDGEQSADHTLLNRLFQYYKKEKHEVALKSRIIFNENYRSTPS 994
Query: 630 LSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN-RPMFFYVQMGQEEISASGTSYLN 688
+ +F S FY G G I + + P P P+ P+ F G E S S+ N
Sbjct: 995 IIDFVSRHFYVG---KGDAICAKG----NVP-PHPDLYPLMFCHVAGSAERDMSMVSWCN 1046
Query: 689 RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK----EIE 744
E V + V + P++ G + +R +V++ + A+RQ+L K E+
Sbjct: 1047 NLEIREVIEKVEEMRQRW--PNEWG---KQDLKRMCVVSHGMQVMAIRQELRKRHLGEVT 1101
Query: 745 VASVDSFQGREKDYIILSCVRSNEHQ------GIGFLNDPRRLNVALTRARYGIVILGNP 798
V + ++ G++ II+S V + E + F ND R LN +TRA+ ++++G+
Sbjct: 1102 VDNYENLPGKQFRVIIISTVHTKESLSVINSPNVDFFNDARVLNTIMTRAQSQVIVVGDA 1161
Query: 799 KVLSK----QPLWNGLLTHYKEHECLVEG-------PLNNLKQSMVQFQKPKK 840
L +W G + EC+ +G L N++Q++ + K+
Sbjct: 1162 VALCSYGQCSKVWKGFIK-----ECISQGSMSPESLTLENIRQAVCDQESWKR 1209
>gi|390960972|ref|YP_006424806.1| DNA helicase [Thermococcus sp. CL1]
gi|390519280|gb|AFL95012.1| DNA helicase [Thermococcus sp. CL1]
Length = 660
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 164/496 (33%), Positives = 234/496 (47%), Gaps = 80/496 (16%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LNASQ AV L LI GP GTGKT T ++ +G +VL A SNVAVD
Sbjct: 175 LNASQRKAVARALGSDDFFLIHGPFGTGKTRTLVELIRQEVARGN-KVLATAESNVAVDN 233
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKSELHKLQQLKDEQGE 508
L E+++ +GLKVVR+ SR VS + TL Y + RH E EL + Q E+ +
Sbjct: 234 LVERLANSGLKVVRIGHPSR--VSKNLHETTLAYLITRHELYGELRELRVIGQNLAEKRD 291
Query: 509 LSSSDEKKYK-----------------------------------------------ALK 521
+ KY+ L+
Sbjct: 292 TFTKPSPKYRRGLSDREILRLASKGIGTRGVPARLIREMAEWIKINRQVQKTFDDARKLE 351
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
REI + ADV+ T AG + + +IDE+TQAT P LIP + A++ VL
Sbjct: 352 ERIAREIIREADVVLTTNSSAGLEVVDYGSYDVAVIDEATQATIPSVLIP-INRARRFVL 410
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNSFYE 640
GDH QL P I+ +KA G ++LFE L+ K L VQYRM+ L FPS FY+
Sbjct: 411 AGDHKQLPPTILSEKAKELG--KTLFEGLIERYPEKSEMLTVQYRMNERLMRFPSREFYD 468
Query: 641 GTLQNGVTINERQ--SSGIDFP-----WPVPNRP--MFFYVQMGQEEISASGTSY----- 686
G ++ ++ G++ P W +P + ++ + E Y
Sbjct: 469 GRIEADESVRSITLVDLGVESPDEGDVWAEVLKPGNVLVFIDTARRENRFERQRYGSESR 528
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EA V + + L+ GV IGVITPY+ QR I + + +E+EV
Sbjct: 529 ENPLEARLVREAIERLLKLGVRSEWIGVITPYDDQRDLISSLLP----------EEVEVK 578
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD +QGREK+ I+LS VRSN+ +GFL D RRLNV+LTRA+ ++++G+ LS
Sbjct: 579 TVDGYQGREKEVIVLSFVRSNKRGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSAHAT 638
Query: 807 WNGLLTHYKEHECLVE 822
+ L+ +E E +V+
Sbjct: 639 YKRLVEFVRERETVVD 654
>gi|297805152|ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
lyrata]
gi|297316296|gb|EFH46719.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
lyrata]
Length = 979
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 230/447 (51%), Gaps = 50/447 (11%)
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 463
+RP+ ++QGPPGTGKT ++ +QG+ +VLV AP+N AVD + EK+ GL +VR
Sbjct: 520 KRPVMIVQGPPGTGKTGMLKEVITLAVQQGE-RVLVTAPTNAAVDNMVEKLLHLGLNIVR 578
Query: 464 LCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHK---------LQQLKDEQ-----GEL 509
+ +R +SS V +L V S ++EL + Q L+D+ +L
Sbjct: 579 VGNPAR--ISSAVASKSLGEIVNSKLASFRAELERKKSDLRKDLRQCLRDDVLAAGIRQL 636
Query: 510 SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR-FRQVLIDESTQATEPEC 568
K K ++ T +EI +A V+ T +GA DP + F V+IDE+ Q+ EP C
Sbjct: 637 LKQLGKTLKKKEKETVKEILSNAHVVFATNIGAADPLIRRLETFDLVVIDEAGQSIEPSC 696
Query: 569 LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GLKPIRLQVQYRM 626
IP++ G K+ +L GD CQL PV++ +KA GL SL ER L G+ +L QYRM
Sbjct: 697 WIPILQG-KRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQYRM 755
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN------------RPMFFYVQM 674
+ ++ + S Y G L++ ++ ID P+ P R + + M
Sbjct: 756 NDVIAGWASKEMYGGWLKSAPSVASHLL--IDSPFVKPTWITQCPLVLLDTRMPYGSLSM 813
Query: 675 GQEE-ISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQ----RAYIVNY 728
G EE + +GT S N EA V V + + +GV P I V +PY Q R + ++
Sbjct: 814 GCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVSPMAIAVQSPYVAQVQLLRERLDDF 873
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
+G +EVA++DSFQGRE D +I+S VRSN +GFL D RR+NVA+TRA
Sbjct: 874 PVADG---------VEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRA 924
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYK 815
R + ++ + + LL H +
Sbjct: 925 RKHVAVVCDSSTICHNTFLARLLRHIR 951
>gi|256271560|gb|EEU06603.1| Hcs1p [Saccharomyces cerevisiae JAY291]
Length = 683
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 282/566 (49%), Gaps = 65/566 (11%)
Query: 288 SGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKS---TSFDRMQ 344
S D+ + G V K+ + ++ + L SQ V + +S ++ K+ +++RM+
Sbjct: 105 SEDSNGEQAECSGVVYKM-SDTQITIALEESQDVIATTFYSYSKLYILKTINVVTYNRME 163
Query: 345 GAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL-PELNASQVFAVKSVL 403
M+ + + + I +L+ E + NT + L P LN SQ A+ +
Sbjct: 164 STMRKLSEISSPIQDKIIQYLVN---ERPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAI 220
Query: 404 QRPISLIQGPPGTGKTVTSAAIVYHM-AKQGQGQVLVCAPSNVAVDQLAEKIS--ATGLK 460
+++I GPPGTGKT T ++ + K + ++L+C PSN++VD + E+++
Sbjct: 221 NNDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL 280
Query: 461 VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ----LKDEQGELSSSDEKK 516
++R+ +R S+ L + + + E+ KL Q LK+ + + +E K
Sbjct: 281 LLRIGHPARLLDSNKRHSLDILSKKNTIVKDISQEIDKLIQENKKLKNYKQRKENWNEIK 340
Query: 517 Y--KALKR---ATEREISQSADVICCTCVGAGDPRLA-------NFR-FRQVLIDESTQA 563
K LK+ T +++ + ++ T G+ L NF+ F ++IDE +QA
Sbjct: 341 LLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQA 400
Query: 564 TEPECLIPLVLGAKQ---VVLVGDHCQLGPVIMCK--KAARAGLAQSLFERLVLLGLKPI 618
EP+C IPL+ Q +VL GD+ QL P I + K L +LF+R++ + P
Sbjct: 401 MEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIFPK 458
Query: 619 R-----LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNR----- 666
R L VQYRM+ + EFPS+S Y G L T+ R ID P P+
Sbjct: 459 RDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDDDT 516
Query: 667 --PMFFYVQMGQE------EISASGTSYLNRTEAANVEKIVTTFLRSGVVP-SQIGVITP 717
P+ +Y G E E + G+ Y N E A V++ + LRS VP + IGVI+P
Sbjct: 517 KIPLIWYDTQGDEFQETADEATILGSKY-NEGEIAIVKEHIEN-LRSFNVPGNSIGVISP 574
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q +++ + L +IE+++VD FQGREKD IILS VRSNE +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 778 PRRLNVALTRARYGIVILGNPKVLSK 803
RRLNVA+TR R +V++GN +VL +
Sbjct: 630 ERRLNVAMTRPRRQLVVVGNIEVLQR 655
>gi|406662219|ref|ZP_11070322.1| putative DNA helicase [Cecembia lonarensis LW9]
gi|405553902|gb|EKB49075.1| putative DNA helicase [Cecembia lonarensis LW9]
Length = 659
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 247/526 (46%), Gaps = 59/526 (11%)
Query: 331 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH-EVEVQMVRNTLPRRFGAPGLP 389
+D ++ S+ M+ A+K E S G + + LLG E + V + +P
Sbjct: 147 IDLLFDEASYREMESALKAVIKAENSRLGELKNILLGQKEPNFEGVSHLIP--------V 198
Query: 390 ELNASQVFAVKSV-LQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 448
+LN SQ A++ V + +++I GPPGTGKT T V +Q QVLVCAPSN AVD
Sbjct: 199 DLNPSQQAALQLVSAAKDVAIIHGPPGTGKTTTLVQAVIGSLQQ-HAQVLVCAPSNAAVD 257
Query: 449 QLAEKISATGLKVVRLCAKSR---EAVSSPVE-HLTLH--YQVRHLDTSEKSELHKLQQ- 501
L EKI G+ +R+ +R +S ++ +TLH Y+ + E KL Q
Sbjct: 258 LLVEKIREKGISTLRIGHPARVEDHILSQTLDAKITLHDSYKDLKKLKKKADEYRKLGQK 317
Query: 502 ---------------LKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPR 546
L DE L E L+ ++ Q V T VGA +
Sbjct: 318 YKRSFGSEERMQRKRLFDEANRLKDEAEH----LEEYIMYDVFQQTQVFASTLVGASNSV 373
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSL 606
L +F V IDE+ Q E IP + A +VV+ GDHCQL P I +AA+AGL+++L
Sbjct: 374 LKGMKFPIVFIDEAAQGLEAASWIP-IQKALKVVMAGDHCQLPPTIKSYEAAKAGLSETL 432
Query: 607 FERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN 665
FE++ + + LQ+QYRM + F + FY+ L G N +
Sbjct: 433 FEKVTKRQPQVTKMLQLQYRMPELIMGFSNKIFYQNEL--GAAKNTESH------FLSEG 484
Query: 666 RPMFFYVQMG----QEEISASGTSYLNRTEAANVEKIVTTFL-RSGVVPSQ-----IGVI 715
P+ ++ E I S N+ EA + + L R+G+ + IG+I
Sbjct: 485 EPVLEFIDTAGSGFVEAIEEESLSTFNQEEARFALQYLEDLLKRTGIAKIKEKRWTIGLI 544
Query: 716 TPYEGQRAYIVNYMSRNGAL--RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
PY Q + + A + + + + S+D FQG+E+D I++S VRSN IG
Sbjct: 545 APYRAQVRKFNELLFESYAFPNLRSFPELLTIDSIDGFQGQERDIILISLVRSNAKGEIG 604
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHEC 819
FL D RR+NVALTRA+ +V++G+ LS +N + +E+ C
Sbjct: 605 FLADTRRMNVALTRAKRKLVVIGDSATLSHHSFYNAFFDYVEENNC 650
>gi|407926953|gb|EKG19860.1| PhoH-like protein [Macrophomina phaseolina MS6]
Length = 1608
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/464 (32%), Positives = 222/464 (47%), Gaps = 56/464 (12%)
Query: 386 PGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMA-KQGQGQVLVCAPSN 444
P P LN SQ+ AV + L+ P+ L+ GPPGTGKT T AI+ + ++ G+VLV AP++
Sbjct: 1177 PNDPSLNESQLAAVSAALKHPLCLLWGPPGTGKTRTIVAILIQLLLRESTGRVLVTAPTH 1236
Query: 445 VAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKD 504
AVD + K LK + + VS+ V ++ + D ++++
Sbjct: 1237 NAVDNVLRKF--LELKGIAQTKMTPLRVSTDVAKVSEELRPYTCDAMMGKDINE------ 1288
Query: 505 EQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT 564
+ A K+A +R + A +I TC+GAG L F VL+DE++Q T
Sbjct: 1289 -----------HFDARKKAAKR--IKDARLIFTTCIGAGLGLLRGESFDTVLVDEASQQT 1335
Query: 565 EPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAAR---AGLAQSLFERLVLLGLKPIRLQ 621
EP L+PL G + VLVGDH QL + + L +SL+E GL + +
Sbjct: 1336 EPASLVPLTKGCEHAVLVGDHVQLRATVQMQSLVTDFDISLFESLYEAADSPGLAKVMIN 1395
Query: 622 VQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV-----PNRPMFFYVQMGQ 676
VQYR+H + F S FY+ L + R FPWP P R M
Sbjct: 1396 VQYRIHRQICAFSSKEFYQERLHTAAQDDARPLPASAFPWPALPSGHPAR-MALIPCASP 1454
Query: 677 EEISASGTSYLNRTEAANVEKIVTTFLR--SGVVPSQ---IGVITPYEGQRAYIVNYMSR 731
E+I S NR +A ++ + L G P+ + V+TPY QR + + +
Sbjct: 1455 EDIGRKSKS--NRGQALLCREVCSHLLSFSPGSTPATSLTVAVLTPYSRQRELLKQMLPK 1512
Query: 732 NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 791
+G L E++S+D +QGRE D ++ R N H +GFL+D RRLNV +TRA+ G
Sbjct: 1513 SGML--------EISSIDGYQGREADVVVFVTTRCNVHGQLGFLSDMRRLNVTMTRAKAG 1564
Query: 792 IVILGNPKVL---------SKQPLWNGLLTHYKEHECLVEGPLN 826
+VI+G+ L SKQ +W LL +E E VE N
Sbjct: 1565 VVIIGHKDTLCGGAESDTPSKQ-IWRRLLASCREMELGVETESN 1607
>gi|389641863|ref|XP_003718564.1| DNA helicase [Magnaporthe oryzae 70-15]
gi|351641117|gb|EHA48980.1| DNA helicase [Magnaporthe oryzae 70-15]
Length = 713
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 239/502 (47%), Gaps = 82/502 (16%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L + I+LI GPPGTGKT T ++ M KQG ++LVC PSN++V
Sbjct: 213 PTLNDSQKDAIRFALASKEIALIHGPPGTGKTHTLIELILQMLKQGL-RILVCGPSNISV 271
Query: 448 DQLAEKISATGLKVVRL----------CAKSREAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D + E+++ + +VRL S + ++ E + VR ++++ +
Sbjct: 272 DNIVERLAPHKVPIVRLGHPARLLPSVVGHSLDVLTQTSEAGAIVRDVRAEMDAKQASIK 331
Query: 498 KLQQLKDEQ---GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + GEL K+++ ++ + QS+ V+ T G+G +L +F
Sbjct: 332 KTKSGRERKAIYGELHEL-RKEFRDREKRCVANLLQSSKVVLATLHGSGGFQLRQEKFDV 390
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVI--MCKKAARAG----------- 601
V+IDE++QA E +C + L L AK+ VL GDH QL P I + KAA+
Sbjct: 391 VIIDEASQALEAQCWVAL-LSAKKAVLAGDHLQLPPTIKSLNSKAAKTATGGDGSGTADG 449
Query: 602 ---------------LAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQ 644
L +LF+RL+ L I+ L QYRMH + FPS+ Y G L
Sbjct: 450 EESSAGQSRKKKGVTLETTLFDRLLDLHGPAIKRMLTTQYRMHEKIMRFPSDELYGGRLV 509
Query: 645 NGVTINERQSSGIDFPWPVPN-----RPMFFYVQMG--------------------QEEI 679
+ ER D P+ V + P+ F G + +
Sbjct: 510 AAEAVKERLLK--DLPYKVEDTDDTSEPLIFIDTQGGDFPERNDEMDNGDADDKKKTKRM 567
Query: 680 SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 739
G S N EAA V + V + + +GV P I ITPY Q A + L +
Sbjct: 568 LLHGESKSNEMEAALVAQHVRSLVDAGVKPEDIACITPYNAQLAVL-------APLLKDR 620
Query: 740 YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 799
+ IE+ SVD FQGREK+ +++S RSN +GFL + RRLNVA+TR + + ++G+ +
Sbjct: 621 FPGIELGSVDGFQGREKEAVVVSLCRSNPDGEVGFLGERRRLNVAMTRPKRSLTVIGDSE 680
Query: 800 VLSK-QPLWNGLLTHYKEHECL 820
+ + G + H +E+ L
Sbjct: 681 TVKRGSKFLKGWMEHLEENADL 702
>gi|410957029|ref|XP_003985137.1| PREDICTED: uncharacterized protein FLJ44066, partial [Felis catus]
Length = 1242
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 232/433 (53%), Gaps = 40/433 (9%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + ++L+ + +NVAVD++
Sbjct: 785 PITIIHGIFGAGKSYLLAVVILFFVQLFEKSEVPTVGNARPWKLLISSSTNVAVDRVLLG 844
Query: 454 ISATGL-KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G K VR+ S ++ P+ +LH S ++E +L++L E +
Sbjct: 845 LLSLGFEKFVRV--GSVRKIAKPILPYSLH-------ASSENENEQLKELNALMKEDLTP 895
Query: 513 DEKKY--KAL---KRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPE 567
EK Y K++ K T + + + V+ TC P + + +F V++DE +Q TEP
Sbjct: 896 LEKIYVRKSIEQHKLGTNKTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPA 955
Query: 568 CLIPLV-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYR 625
L+P+ ++++LVGD QL P I AA GL Q+LF+RL L+G KP+ L+ QYR
Sbjct: 956 SLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPVLLRTQYR 1015
Query: 626 MHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTS 685
HP++S ++ FYEG L NG++ ER W +P + FY G E+I S
Sbjct: 1016 CHPAISAISNDLFYEGNLMNGISETERSPL---LEW-LPT--LCFYNVKGLEQIERDN-S 1068
Query: 686 YLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV 745
+ N EAA K++ + + SG+ S IGVIT Y+ Q + + ++ + K ++V
Sbjct: 1069 FHNVAEAAFTLKLIQSLIVSGIAGSVIGVITLYKSQMYKLCHSLNAVDFDHPDI-KAVQV 1127
Query: 746 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 805
++VD+FQG EK+ IILSCVR+ + +GF++ +R+NVALTR R ++I+GN L K
Sbjct: 1128 STVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGNLACLRKNR 1184
Query: 806 LWNGLLTHYKEHE 818
LW ++ H + E
Sbjct: 1185 LWGRVIQHCEGRE 1197
>gi|380742039|tpe|CCE70673.1| TPA: DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 629
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 240/499 (48%), Gaps = 79/499 (15%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A+ L L+ GP GTGKT T ++ K+G +VL A SNVAVD
Sbjct: 147 LNRSQRKAISKALGSEDFFLVHGPFGTGKTRTLVELIRQEVKRG-NKVLATAESNVAVDN 205
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHY---------QVRHL-----------D 489
L E++S +G+K+VR+ SR VS + TL Y ++R L D
Sbjct: 206 LVERLSRSGIKIVRIGHPSR--VSKHLHETTLAYLITQHELYGELRELRVIGQSLAEKRD 263
Query: 490 TSEK-----------SELHKLQQLKD--------------EQGELSSSDEKKY---KALK 521
T K E+ KL + K E +L+ +K + + L+
Sbjct: 264 TYTKPTPKFRRGLSDEEIIKLAERKRGARGLSARLIMEMAEWIKLNRQVQKAFDDARKLE 323
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
R+I + ADV+ T A + + +IDE+TQ+T P LIPL ++ VL
Sbjct: 324 ERIARDIIREADVVLTTNSSAALEVVDYDTYDVAIIDEATQSTIPSILIPLN-KVERFVL 382
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNSFYE 640
GDH QL P I+ +A L+++LFE L+ K L VQYRM+ + EFPS FY
Sbjct: 383 AGDHKQLPPTILSLEAQE--LSRTLFEGLIERYPWKSEMLVVQYRMNERIMEFPSKEFYG 440
Query: 641 GTL-----QNGVTIN---ERQSSGIDFPWPVPNRPMFFYVQMGQ-----EEISASGTSYL 687
G + G+T+ E QS + + + ++ + E S
Sbjct: 441 GKIIADESVRGITLRDLVEYQSPNDSWGKILNPENVIVFIDTSKAENKWERQRRGSESRE 500
Query: 688 NRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS 747
N EA V KIV L GV P IGVITPY+ QR I ++ +++EV +
Sbjct: 501 NPLEAEIVAKIVDKLLSIGVKPEWIGVITPYDDQRDLI----------SMKVPEDVEVKT 550
Query: 748 VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 807
VD +QGREK+ IILS VRSN+ IGFL D RRLNV+LTRA+ ++++G+ LS +
Sbjct: 551 VDGYQGREKEVIILSLVRSNKLGEIGFLKDLRRLNVSLTRAKRKLIVVGDSSTLSSHETY 610
Query: 808 NGLLTHYKEHECLVEGPLN 826
++ +KE C +E P +
Sbjct: 611 KKMIEFFKEKGCFIEFPFS 629
>gi|326919828|ref|XP_003206179.1| PREDICTED: DNA-binding protein SMUBP-2-like [Meleagris gallopavo]
Length = 980
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 228/460 (49%), Gaps = 51/460 (11%)
Query: 391 LNASQVFAVK-SVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ASQ AV S+ Q+ ++++ GPPGTGKT T I+ +QG +VL CAPSNVAVD
Sbjct: 188 LDASQREAVSFSLAQKEVAIVHGPPGTGKTTTIVEIILQAVQQGL-KVLCCAPSNVAVDN 246
Query: 450 LAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKL 499
L E+++ +++RL +R +AV + + + VR D + K
Sbjct: 247 LVERLAGYKARILRLGHPARLLEPIQQHSLDAVLARSDSAQIVADVRK-DIDQAFAKSKK 305
Query: 500 QQLKDEQGELSSSDEKKYKALKRATEREISQS---ADVICCTCVGAGD----PRLANFRF 552
Q K E+G S + K LK E ++ + A ++ T GA L F
Sbjct: 306 AQDKGERGHFLSEIKALRKELKEREETAMTAALTHASIVLATNTGASSDGPLKLLPENYF 365
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV- 611
V+IDE QA E C IPL L A + +L GDH QL P I+ KAA GL+ SL ER++
Sbjct: 366 DLVVIDECAQALEASCWIPL-LKAPKCILAGDHKQLPPTIISHKAAAKGLSLSLMERVIE 424
Query: 612 LLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQN-------------GVTINERQSSGI 657
G K ++ L VQYRMH ++ ++ S+ Y G L GVT E +
Sbjct: 425 RYGEKVVKMLTVQYRMHEAIMQWASSEMYGGRLTAHPSVAQHLLKDLPGVTCTEETT--- 481
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
P + + +++ E+ + G + +++ +V +GV I V+ P
Sbjct: 482 -IPLLLIDTAGCGLLELEVEDEQSKGNPGEVQLAGLHIQALVD----AGVKARDIAVVAP 536
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q + ++ Y E+E+ SVD FQGREK+ +ILS VRSN +GFL +
Sbjct: 537 YNLQVDMLREHLCHR-------YPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAE 589
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
RR+NVA+TRAR + I+ + + Q LL H+++H
Sbjct: 590 DRRINVAVTRARRHVAIICDSHTVGSQAFLGRLLEHFRQH 629
>gi|300773891|ref|ZP_07083760.1| DNA helicase [Sphingobacterium spiritivorum ATCC 33861]
gi|300760062|gb|EFK56889.1| DNA helicase [Sphingobacterium spiritivorum ATCC 33861]
Length = 634
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 162/568 (28%), Positives = 274/568 (48%), Gaps = 57/568 (10%)
Query: 284 RLRYSGDAA-----HPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHG-FSVDFVWKS 337
R RY A +P+ + I +E+ + LR + +P + G VD ++
Sbjct: 72 RFRYGMPVALFSNHNPSADRISGTIGYVNGDEMKISLRVDE-LPDWVRSGKLGVDLLFDE 130
Query: 338 TSFDRMQGAMK-TFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQV 396
S+ M A+K A + G + + L+ V + + + LN Q+
Sbjct: 131 NSYQEMFKALKRADAARDDKKMGPLINMLIDQHVHDS---DHMVSDHQINSITGLNEYQL 187
Query: 397 FAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS 455
AV ++ P ++++ GPPGTGKT T + + ++ Q+LV APSN AVD L EK+
Sbjct: 188 KAVNQIIASPHLTIVHGPPGTGKTTTLVQGIKALLQKYPDQILVTAPSNTAVDLLTEKLH 247
Query: 456 ATGLKVVRLCAKSREAVSSPVEHLTL------HYQVRHLDTSEKSELHKLQQLKDEQGEL 509
TG+KVVR+ + VS + LTL H + L T K K +
Sbjct: 248 ETGVKVVRIGNPVK--VSEQLHELTLDGKLESHPMQKELKTIRKKADVFRDMAKKYKRNF 305
Query: 510 SSSDEKKYKAL--------------KRATEREISQSADVICCTCVGAGDPRLANFRFRQV 555
++ + KAL + +++I A VI T VG+ + + + V
Sbjct: 306 GKAERDQKKALFQEAKNLMKEAEQIAQYIQKDILDQAQVITATLVGSNHSAIQDRTYAAV 365
Query: 556 LIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGL 615
IDE+ QA EP C IP +L + +++L GDH QL P I K ++ ++L E+LV
Sbjct: 366 FIDEAGQALEPACWIP-ILKSDKLILAGDHLQLPPTIKSKDSSVRAFHETLMEKLVHAYP 424
Query: 616 KPI-RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQM 674
+ L+ QYRMH + ++PS + Y TL +I +++ + P F ++
Sbjct: 425 SCVCLLRQQYRMHQDIMQYPSAALYNNTLFAEPSIAQQELT--------PGDNAFLFIDT 476
Query: 675 ---GQEEISASGTSYLNRTEAANVEKIVTTFLRS-----GVVPS-QIGVITPYEGQRAYI 725
G +E+ T+ N EA + + +T +L + + P IG+I+PY Q+ +
Sbjct: 477 AGAGFDEVQ-EDTAISNIEEANFLIQHLTQYLAAFKKDENMSPFPNIGLISPYR-QQVLL 534
Query: 726 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 785
+ + RN ++ + I++ ++D FQG+E+D I +S RSN IGFLN+ RR+NVA+
Sbjct: 535 LKELIRNDEMK--ISVSIQIQTIDGFQGQERDIIYISLTRSNAEGQIGFLNEIRRMNVAM 592
Query: 786 TRARYGIVILGNPKVLSKQPLWNGLLTH 813
TRARY ++I+G+ + + P + G++ +
Sbjct: 593 TRARYKLIIIGDSSTIGQHPFYAGMIQY 620
>gi|453088648|gb|EMF16688.1| hypothetical protein SEPMUDRAFT_122176 [Mycosphaerella populorum
SO2202]
Length = 2003
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 175/546 (32%), Positives = 247/546 (45%), Gaps = 120/546 (21%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQ---------------- 432
ELN +Q AV L+ SLIQGPPG+GKT T AIV + Q
Sbjct: 1270 ELNTAQSEAVNGALENEGFSLIQGPPGSGKTKTIVAIVGGLLTQVLKNAPRGLHKISMPA 1329
Query: 433 --GQG----------QVLVCAPSNVAVDQLAEKI-----SATG----LKVVRLCAKSREA 471
G G ++LVCAPSN AVD+L ++ S G +KVVR+ EA
Sbjct: 1330 LGGHGNGASGDAPAKKLLVCAPSNAAVDELVLRLMKGVKSKDGTHHDIKVVRIG--RSEA 1387
Query: 472 VSSPVEHLTLHYQVR-----------------------HLDTSEKSELHKLQQLKDEQGE 508
+S+ V +T+ V+ H D S ++L L Q +D + E
Sbjct: 1388 ISAQVADVTMETLVQQKIGGSNAADDKQRKMNAELFKEHSDIS--TQLRDLYQQRDSEEE 1445
Query: 509 LSSSDEKKYKALK------RATEREISQSAD----------------------------- 533
+ D K K L+ R + E+ Q D
Sbjct: 1446 MRKLDPLKRKLLEDSIVHIRRRKAELGQRIDSVKDNEKSAGREQELNRKRAQQAVLDEAH 1505
Query: 534 VICCTCVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPV 591
VIC T G+G + + F V+IDE+ Q E LIPL G + V+VGD QL P
Sbjct: 1506 VICATLSGSGHDMFSGLSIEFETVIIDEAAQCVEMSSLIPLKYGCVKCVMVGDPKQLPPT 1565
Query: 592 IMCKKAARAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTI- 649
+ K+AA+ QSLF R+ K + L QYRMHP +S FPS +FY+G L++G ++
Sbjct: 1566 VFSKEAAKFQYEQSLFVRMQNNHPKDVHLLDTQYRMHPDISVFPSRTFYDGLLKDGPSMA 1625
Query: 650 NERQSSGIDFPWPVPN--RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV 707
N R+ PW + P F+ GQ + G S +N+ E V ++ T LR+
Sbjct: 1626 NLRKQ-----PWHASSLLAPYRFFDVAGQHSSAPRGNSLVNKAEI-EVAIMLYTRLRTDF 1679
Query: 708 ----VPSQIGVITPYEGQ-RAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 762
+IG+I Y+ Q R ++S+ G + IE + D+FQGRE + II S
Sbjct: 1680 PTYDFTGKIGIIVTYKAQLREMKGTFISKFGP---DIADYIEFNTTDAFQGRESEIIIFS 1736
Query: 763 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVE 822
CVR++ IGFL D RR+NV LTRA+ + +LGN LS W L+ K +
Sbjct: 1737 CVRASPAGTIGFLQDIRRMNVGLTRAKSSLWVLGNASTLSSGRYWKKLVDDAKGRDNYTT 1796
Query: 823 GPLNNL 828
G L ++
Sbjct: 1797 GNLKSM 1802
>gi|403362863|gb|EJY81167.1| hypothetical protein OXYTRI_21438 [Oxytricha trifallax]
Length = 717
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/449 (33%), Positives = 234/449 (52%), Gaps = 65/449 (14%)
Query: 399 VKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQ----GQGQVLVCAPSNVAVDQLAEKI 454
V+ L + LIQG G GK+ T +IV + Q+L+CAPSN A+D +AE++
Sbjct: 273 VEKTLYPGLHLIQGGGGCGKSFTLISIVQSWLELLPIGSSTQILICAPSNCAIDLIAERM 332
Query: 455 SATGL---KVVRLCAKSREAVSS---------PVEHLTLHY-QVRHLDTSEKSE------ 495
K VR+ + +RE V + H L Y + + D E
Sbjct: 333 HQIQFLKDKFVRVFSDTREDVFKMTLDNLQPFSLLHKALFYGEQYYFDEDAIYEPFKNMG 392
Query: 496 --LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFR 553
H ++ +K+ + + K+ K E+ I + ++ CT G+ D RL + F+
Sbjct: 393 VNKHGIKFIKNTRID-------KFFNEKDRVEQMILKKIPIVLCTLAGSNDIRLKHMTFQ 445
Query: 554 QVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 613
+V+IDE+TQA E E L P+ L A+ VL+GDH QLGP + + QSLFERLV+
Sbjct: 446 KVIIDEATQAKEFETLKPM-LHAETAVLIGDHKQLGPTYL---EYKIDGPQSLFERLVMN 501
Query: 614 GLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE---RQSSGIDFPWPVPNRPMFF 670
+ L++QYR HP++ +N FY+ L++ I + R + I+ P+ MF
Sbjct: 502 KNEYSLLKIQYRSHPAIVAPLNNIFYDNRLESQYYIMDAETRTKAFINDSMPI----MFI 557
Query: 671 YVQ---MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVN 727
+ +G+ S +S+ N+ E V+K+ G+ QIG++TPY GQ
Sbjct: 558 DTKGCCIGE---SKYESSWYNQYEIDLVQKVFEQMRFIGIDQGQIGIVTPYIGQL----- 609
Query: 728 YMSRNGALRQQLYKEIE---VASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 784
L++QL+ +I+ + SVDS+QGRE DY I+S VR+ + +GF+ DP R+NVA
Sbjct: 610 -----NKLKEQLHNQIDPNGIGSVDSWQGRETDYSIISTVRT---RHLGFVKDPNRMNVA 661
Query: 785 LTRARYGIVILGNPKVLSKQPLWNGLLTH 813
L+RAR+G++I+GN + LS+ WN LT+
Sbjct: 662 LSRARHGMIIIGNSQCLSQDENWNKYLTY 690
>gi|14521437|ref|NP_126913.1| DNA helicase, [Pyrococcus abyssi GE5]
gi|5458655|emb|CAB50143.1| DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 653
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 240/499 (48%), Gaps = 79/499 (15%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LN SQ A+ L L+ GP GTGKT T ++ K+G +VL A SNVAVD
Sbjct: 171 LNRSQRKAISKALGSEDFFLVHGPFGTGKTRTLVELIRQEVKRG-NKVLATAESNVAVDN 229
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHY---------QVRHL-----------D 489
L E++S +G+K+VR+ SR VS + TL Y ++R L D
Sbjct: 230 LVERLSRSGIKIVRIGHPSR--VSKHLHETTLAYLITQHELYGELRELRVIGQSLAEKRD 287
Query: 490 TSEK-----------SELHKLQQLKD--------------EQGELSSSDEKKY---KALK 521
T K E+ KL + K E +L+ +K + + L+
Sbjct: 288 TYTKPTPKFRRGLSDEEIIKLAERKRGARGLSARLIMEMAEWIKLNRQVQKAFDDARKLE 347
Query: 522 RATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
R+I + ADV+ T A + + +IDE+TQ+T P LIPL ++ VL
Sbjct: 348 ERIARDIIREADVVLTTNSSAALEVVDYDTYDVAIIDEATQSTIPSILIPLN-KVERFVL 406
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNSFYE 640
GDH QL P I+ +A L+++LFE L+ K L VQYRM+ + EFPS FY
Sbjct: 407 AGDHKQLPPTILSLEAQE--LSRTLFEGLIERYPWKSEMLVVQYRMNERIMEFPSKEFYG 464
Query: 641 GTL-----QNGVTIN---ERQSSGIDFPWPVPNRPMFFYVQMGQ-----EEISASGTSYL 687
G + G+T+ E QS + + + ++ + E S
Sbjct: 465 GKIIADESVRGITLRDLVEYQSPNDSWGKILNPENVIVFIDTSKAENKWERQRRGSESRE 524
Query: 688 NRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS 747
N EA V KIV L GV P IGVITPY+ QR I ++ +++EV +
Sbjct: 525 NPLEAEIVAKIVDKLLSIGVKPEWIGVITPYDDQRDLI----------SMKVPEDVEVKT 574
Query: 748 VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 807
VD +QGREK+ IILS VRSN+ IGFL D RRLNV+LTRA+ ++++G+ LS +
Sbjct: 575 VDGYQGREKEVIILSLVRSNKLGEIGFLKDLRRLNVSLTRAKRKLIVVGDSSTLSSHETY 634
Query: 808 NGLLTHYKEHECLVEGPLN 826
++ +KE C +E P +
Sbjct: 635 KKMIEFFKEKGCFIEFPFS 653
>gi|343429606|emb|CBQ73179.1| related to SEN1 protein [Sporisorium reilianum SRZ2]
Length = 2239
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 263/546 (48%), Gaps = 120/546 (21%)
Query: 390 ELNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHM------------AKQGQG- 435
++N Q A+ S+ SLIQGPPGTGKT T A++ A Q QG
Sbjct: 1474 QVNEPQARAILGSLATEGFSLIQGPPGTGKTKTICALIGAFVSNRKGPSMSVQAGQAQGK 1533
Query: 436 -----QVLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSSPVEHLT 480
++L+CAPSN A+D++A++ A G+ KVVR+ E ++ V+ ++
Sbjct: 1534 LGATKKILLCAPSNAAIDEVAKRARA-GIRLADGKTIHPKVVRVGRD--ETINVSVKDIS 1590
Query: 481 LHYQVRH-------LDTSEK-----------SELHKLQ-QLKDEQGELSSS--------- 512
L + D++ +E+H L+ Q + +Q ELS +
Sbjct: 1591 LENLIDQRLEGGSAFDSNRNGGATADPSALHAEIHILKMQREQKQTELSQARANGSQAMV 1650
Query: 513 ---------------------DEKKYK---------ALKRATEREISQSADVICCTCVGA 542
DE K K A +R EI ADVIC T GA
Sbjct: 1651 TQLEAEIRNLSAKRLGVMSKLDEAKDKQQSQHRQREADRRRARLEILGDADVICTTLSGA 1710
Query: 543 GDPRLAN--FRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARA 600
G L+ F F V+IDE+ QA E +IPL G KQ ++VGD QL P ++ ++A +
Sbjct: 1711 GHEMLSGVAFDFETVVIDEAAQAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQEAEKL 1770
Query: 601 GLAQSLFERLVLLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINE--RQSSGI 657
G +QSLF R+ + + L +QYRMHP +S FPS +FY+ LQ+G + E RQ
Sbjct: 1771 GYSQSLFVRMFERSPQAVHLLSIQYRMHPEISVFPSKAFYDSKLQDGPNMAELTRQ---- 1826
Query: 658 DFPWPVPN--RPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---- 711
PW RP F ++ E S +N+ E ANV + LR+ PS+
Sbjct: 1827 --PWHKYELMRP-FKFLSTKAPESPGRMHSIINKEE-ANVALALYERLRTD-NPSENFDY 1881
Query: 712 -IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS-NEH 769
IGV+T Y+ Q + + L + I+ +VD FQG+EKD IILSCVRS E
Sbjct: 1882 RIGVVTMYKAQVFELKRTFQQRYGL--DIADRIDFNTVDGFQGQEKDIIILSCVRSAAEP 1939
Query: 770 QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEHECLVEGPLNNL 828
+ IGFL+D RRLNVA+TRA+ + ++GN + L + P+W L+ ++ +G + +
Sbjct: 1940 RSIGFLSDRRRLNVAVTRAKSNLFVIGNAEHLRRGDPIWERLVATAEQ-----QGSIQPI 1994
Query: 829 KQSMVQ 834
+M+Q
Sbjct: 1995 TVAMLQ 2000
>gi|337284021|ref|YP_004623495.1| DNA helicase [Pyrococcus yayanosii CH1]
gi|334899955|gb|AEH24223.1| DNA helicase [Pyrococcus yayanosii CH1]
Length = 656
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 175/497 (35%), Positives = 238/497 (47%), Gaps = 82/497 (16%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
LNASQ AV L LI GP GTGKT T A ++ K+G +VL A SNVAVD
Sbjct: 172 LNASQKKAVSLALGSSDFFLIHGPFGTGKTRTLAELIRQEVKRGN-KVLATAESNVAVDN 230
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV-RHLDTSEKSEL----HKLQQLKD 504
L E+++ L VVR+ SR VS + TL YQ+ RH E EL L + +D
Sbjct: 231 LVERLAE--LNVVRIGHPSR--VSKHLHETTLAYQMTRHELYGELRELLVTAQGLAEKRD 286
Query: 505 ----------------------EQG------------------ELSSSDEKKYKALKRAT 524
E+G +L+ +K + ++
Sbjct: 287 TYTKPLPKFRRGLSDNEILRLAERGIGARGVPARLIREMAEWIKLNRQVQKAFDEARKLE 346
Query: 525 ER---EISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVL 581
ER EI + ADV+ T A L F +IDE+TQAT P LIP + ++ +L
Sbjct: 347 ERIAREIIREADVVLTTNSSAALEILDVADFDVAVIDEATQATIPSILIP-INRVERFIL 405
Query: 582 VGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRMHPSLSEFPSNSFYE 640
GDH QL P I+ +A L+++LFE L+ K L +QYRM+ L FPS FYE
Sbjct: 406 AGDHRQLPPTILSLEAQ--ALSKTLFEGLIERYPEKSAMLNIQYRMNERLMAFPSREFYE 463
Query: 641 GTL-----QNGVTINER--QSSGIDFPWPVPNRP--MFFYVQMGQ-----EEISASGTSY 686
G + +T+ + + G PW RP + ++ E S
Sbjct: 464 GKIIADESVKNITLADLGVKEPGFSEPWAEILRPENVLVFIDTAHRHDKWERQRRGSESR 523
Query: 687 LNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA 746
N EA V IV + GV P IGVITPY+ QR + +S N + +++EV
Sbjct: 524 ENPLEAKIVATIVGKLIEMGVKPEWIGVITPYDDQR----DLISLN------VPEDVEVK 573
Query: 747 SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
+VD +QGREK+ IILS VRSNE IGFL D RRLNV+LTRA+ ++I+G+ LS P
Sbjct: 574 TVDGYQGREKEVIILSLVRSNERGEIGFLRDLRRLNVSLTRAKRKLIIVGDSATLSSHPT 633
Query: 807 WNGLLTHYKEHECLVEG 823
+ L+ KE LV+
Sbjct: 634 YKRLVEFVKEKGKLVDA 650
>gi|282877092|ref|ZP_06285934.1| putative DNA helicase [Prevotella buccalis ATCC 35310]
gi|281300774|gb|EFA93101.1| putative DNA helicase [Prevotella buccalis ATCC 35310]
Length = 659
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 230/469 (49%), Gaps = 53/469 (11%)
Query: 383 FGAPGLPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 441
F P LN Q AV VL+ + + ++ GPPGTGKT T +Y K+ + QVLVCA
Sbjct: 196 FDDIRFPWLNDLQAEAVNKVLKAKDVMVVHGPPGTGKTTTLVEAIYETLKR-ESQVLVCA 254
Query: 442 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVR---HLDTSEKSELHK 498
SN+AVD ++E++ G+ V+R+ +R V+ + L+ Y+ R H D + + K
Sbjct: 255 QSNMAVDWISERLVDRGVNVLRIGNPTR--VNDKM--LSFTYERRFESHPDYPQLWAIRK 310
Query: 499 -LQQLKDEQGELSSSDEKKYKALK-RATEREIS------QSADVICCTCVGAGDPRLANF 550
L+QLK + S +K + L+ RATE EI A VI T G + L
Sbjct: 311 ALRQLKQHRKTAGSGFHQKVERLQERATELEIRIKGQLFGEARVIASTLTGTANRLLMGQ 370
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
+++ + IDE+ QA E C I + +VVL GDHCQL P I A + GL ++L +R+
Sbjct: 371 KYQTLFIDEAAQALEAACWIA-IRKVHRVVLAGDHCQLPPTIKSIAALKGGLDKTLMQRI 429
Query: 611 VLLGLKP---IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFP--W---- 661
V KP L +QYRM+ + F S+ FY G +Q+ I R D P W
Sbjct: 430 V--ENKPEVVTMLGMQYRMNDQIMRFSSDWFYHGKVQSAPAIKYRGILDYDVPIQWIDTA 487
Query: 662 -----------PVPNRPMFFYVQMGQEEISASGTSYLNRTEA----ANVEKIVTTFLRSG 706
+ P F QE +N EA + +E+ +
Sbjct: 488 EQAENAHFIEESASDAPTF------QEHFVGESFGRINEDEAELTLSALEQYFNKIGKQR 541
Query: 707 VVPS--QIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCV 764
++ +G+I+PY Q Y+ + + + I V +VD FQG+E+D I++S V
Sbjct: 542 LLDEAVDVGIISPYRAQVQYLRRLIKKRPFFKP-FRHLISVNTVDGFQGQERDVILISLV 600
Query: 765 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
R+NE IGFL D RR+NVA+TRAR ++ILG+ L + P + L +
Sbjct: 601 RANEDGQIGFLRDLRRMNVAMTRARMKLIILGHVPTLVRHPFYKKLYDY 649
>gi|222424984|dbj|BAH20441.1| PPAR gamma-DNA-binding domain interacting protein1 [Mus musculus]
Length = 2947
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 227/499 (45%), Gaps = 77/499 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ------------- 436
+LN SQ AV+S LQ+ ++IQGPPGTGKTV IVY + Q Q
Sbjct: 2448 KLNQSQDRAVRSALQKQFTVIQGPPGTGKTVVGFHIVYWFHRSNQEQMPTDSSPSGEEQL 2507
Query: 437 ----VLVCAPSNVAVDQLAEKI--SATGLKVVRLCAKSREAVSSPV-------------- 476
VL C PSN +VD L + T +K +R+ + EA P+
Sbjct: 2508 GGPCVLYCGPSNKSVDVLGGLLLRRKTEMKPLRVYGEQAEATEFPLPGVSNRSLFGKTSQ 2567
Query: 477 --------EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK-ALKRATERE 527
+TLH+++R +E+ K E S D + Y+ L +A + E
Sbjct: 2568 EGRPNQSLRSITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLRVYRRVLGKARKHE 2627
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAK---QVVLVGD 584
+ + + VI CTC A L RQ+LIDE+ ATEPE LIPLV +K +VVL+GD
Sbjct: 2628 LERHS-VILCTCCCAASKSLKILNVRQILIDEAGMATEPETLIPLVCFSKTVEKVVLLGD 2686
Query: 585 HCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
H QL PV+ ++ G+ +SLFER I L QYRMH + FPS FY G L+
Sbjct: 2687 HKQLRPVVKSEQLQSLGMDRSLFER---YHRDAIMLDTQYRMHKDICSFPSVEFYGGKLK 2743
Query: 645 NGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF-- 702
+ R+ I P+ + F G E+ T N AN E++
Sbjct: 2744 TWSDL--RRLPSILGHTGKPSCSVIFGSVQGHEQKLLVSTEDGNENSRANPEEVTQVVRI 2801
Query: 703 -----LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKD 757
L V P I V+TPY Q A I + + G + V S+ QG E
Sbjct: 2802 IKQLTLDRTVDPKDIAVLTPYNAQAAAISRGLMQRGV------TGVTVTSITKSQGSEWR 2855
Query: 758 YIILS----CVRSNEHQG---------IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ 804
Y+I+S C RS+ Q +GF+ DP ++NVA+TRA+ + I+G+ +L
Sbjct: 2856 YVIVSTVRTCPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCC 2915
Query: 805 PLWNGLLTHYKEHECLVEG 823
PLW+ LL + LV
Sbjct: 2916 PLWHRLLDFCEAQHSLVSA 2934
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 206/526 (39%), Gaps = 81/526 (15%)
Query: 349 TFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQR--- 405
TF +V + HL+ ++ TLP + P N Q AV + R
Sbjct: 723 TFRFWHQAVDALLEEHLVVPDLPA----CTLPHPWPTPPSFRGNHKQKLAVGLIAGRRPE 778
Query: 406 -----PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLK 460
P LI GP GTGKT T A + +Q +VL+C +N A D
Sbjct: 779 GTKHIPPLLIYGPFGTGKTYTLAMAALEVVQQPHTKVLICTHTNSAAD------------ 826
Query: 461 VVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKY 517
+ + + VSS L + Y R ++ + L +D Q
Sbjct: 827 -IYIREYFHDYVSSGHPEATPLRVMYADRPPRQTDPTTLQYCCLTEDRQ----------- 874
Query: 518 KALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL--VLG 575
A + T E+ V+ T A F F + IDE+ Q E E LIPL L
Sbjct: 875 -AFRPPTGPELVHHRLVVTTTSQARELQVPAGF-FSHIFIDEAAQMLECEALIPLSYALS 932
Query: 576 AKQVVLVGDHCQLGPVIMC---KKAARAGLAQSLF-----ERLVLLGLKPIRLQVQYRMH 627
+VVL GDH Q+ P + K+AR L LF E + I YR
Sbjct: 933 LTRVVLAGDHMQVAPRLFSVPRDKSARHTLLHRLFLYYQQEAHKIAQQSRIIFHENYRST 992
Query: 628 PSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 687
++ F S+ FY L G N Q+SG P + P+ F G E S TS+L
Sbjct: 993 AAIINFVSHHFY---LAKG---NPIQASG-KVPRHPQHYPLMFCHVAGSPEQDMSMTSWL 1045
Query: 688 NRTEAANV-EKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK----E 742
N E V EK+ + P G P E + V++ ++ ALRQ+L + E
Sbjct: 1046 NSAEVTQVVEKVREIY---NTWPHCWG---PREQRHICAVSHGAQVSALRQELRRRNLGE 1099
Query: 743 IEVASVDSFQGREKDYIILSCVRS-NEHQGIG-----FLNDPRRLNVALTRARYGIVILG 796
+ V S + GRE ++LS V + N G F +PR LN +TRA+ +V +G
Sbjct: 1100 VSVGSFEILPGREFRVVVLSSVHNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVG 1159
Query: 797 NPKVLSK----QPLWNGLLTHYKEHECLV--EGPLNNLKQSMVQFQ 836
+ L + LW + EH E L ++Q + Q Q
Sbjct: 1160 DAVALCSSGACRNLWRSFIRECIEHHSAFPEELSLEQIEQGVAQRQ 1205
>gi|444322031|ref|XP_004181671.1| hypothetical protein TBLA_0G02100 [Tetrapisispora blattae CBS 6284]
gi|387514716|emb|CCH62152.1| hypothetical protein TBLA_0G02100 [Tetrapisispora blattae CBS 6284]
Length = 2235
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 181/612 (29%), Positives = 282/612 (46%), Gaps = 130/612 (21%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQ-GAMKTFAVDETSVSGYIYHHLLG 367
++ ++G VDI NH FS F+ T M+ M T + T++ G Y+ L+
Sbjct: 1208 MKNAKGERVDITLRVHRNHRFS-KFLSLRTEIHAMKVMQMTTVEREYTTLEGLEYYDLVN 1266
Query: 368 HEVEVQMVRNTLPRRFGAPGLPE-------LNASQVFAVKSVLQRP-ISLIQGPPGTGKT 419
+E N P + G E LN SQ A+ + + P SLIQGPPGTGKT
Sbjct: 1267 QILEA----NPTPHVEASHGEIERVKANYKLNTSQAEAIVNTVSNPGFSLIQGPPGTGKT 1322
Query: 420 VTSAAIVYHM-------------AKQG-------------QGQVLVCAPSNVAVDQLAEK 453
T I+ + A +G + ++L+CAPSN AVD++ +
Sbjct: 1323 KTILGIIGYFLSTSKMVPSNVIRAPEGVTNSESSKDKLLKKQKILICAPSNAAVDEVVLR 1382
Query: 454 ISA------------------------TGLKVV--------RLCAKSREAVSSPVEHLTL 481
+ + +K V RL K+ E ++P + T
Sbjct: 1383 LKSGIYDKDGKHFIPNLVRVGRSDAVNAAIKDVTLEELVDKRLAKKNYEFSNNPELNKTF 1442
Query: 482 HYQV------------------RHLDTSEKSELH-KLQQL----------KDEQGELSSS 512
+ QV L T + + L +++QL +DE E +S
Sbjct: 1443 NEQVAKRRQLREKLDRENGSVESKLSTEDIANLQIEIRQLSKNINELGKQRDEIRERNSI 1502
Query: 513 DEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLI 570
+ + +R T+ I +D+IC T G+ LA+ +F V+IDE+ Q TE +I
Sbjct: 1503 NYRNRDLDRRNTQASILAGSDIICSTLSGSAHDVLASLGVQFDTVIIDEACQCTELSSII 1562
Query: 571 PLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSL 630
PL G K+ ++VGD QL P ++ A+ QSLF R+ KP L VQYRMHP +
Sbjct: 1563 PLRYGGKRCIMVGDPNQLPPTVLSGAASDFNYNQSLFVRME-KNTKPYLLNVQYRMHPLI 1621
Query: 631 SEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV-----PNRPMFFYVQMGQEEISASGTS 685
S FPS FY+ L++G + + + PW P + FF + G++E + S
Sbjct: 1622 SRFPSKEFYKRELKDGPDMEKITAR----PWHSLEALGPYK--FFDIVSGKQEQNIKTMS 1675
Query: 686 YLN----RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV-NYMSRNGALRQQLY 740
Y+N R ++ ++ F + +IGVI+PY Q + ++ S G + +
Sbjct: 1676 YVNPEEVRVAIELIDYLLRHFEKKVDFTGKIGVISPYREQMMKMKRDFNSYFGGV---IS 1732
Query: 741 KEIEVASVDSFQGREKDYIILSCVRSNEHQ-GIGFLNDPRRLNVALTRARYGIVILGNPK 799
++ ++D FQG+EK+ I+LSCVR++ + G+GFL D RR+NVALTRA+ + ILG+ K
Sbjct: 1733 TYVDFNTIDGFQGQEKEIILLSCVRADASKTGVGFLKDFRRMNVALTRAKSSMWILGHHK 1792
Query: 800 VLSKQPLWNGLL 811
L K LW L+
Sbjct: 1793 SLYKNKLWKHLI 1804
>gi|345562914|gb|EGX45922.1| hypothetical protein AOL_s00112g111 [Arthrobotrys oligospora ATCC
24927]
Length = 1999
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 255/559 (45%), Gaps = 127/559 (22%)
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------------QVLVCAPSNVAVD 448
SLIQGPPGTGKT T A++ + +G ++LVCAPSN AVD
Sbjct: 1301 FSLIQGPPGTGKTKTVIAVIGALLPDDKGVTISIPGSKQPSSGVVSKKLLVCAPSNAAVD 1360
Query: 449 QLAEKISATGLK---------VVRLC-------AKSREAVSSPVEHLTLHYQVRHLDTS- 491
+L ++ +K VVRL A A+ + VE +++Q D+S
Sbjct: 1361 ELVIRLKEGVVKQSGDKFTPAVVRLGRLDVINQAVHDVALETLVEK-KINFQKEKEDSSG 1419
Query: 492 -----------------------EKSELHKLQQLKDEQGE--LSSSDE-----KKYKALK 521
K++ + Q + EQ E L +E +K K L
Sbjct: 1420 GKSKEKPNTIDELRPRMDVLLAERKAKWAESDQARSEQREPPLKLREEIEALTRKIKDLG 1479
Query: 522 RATE-----------------REISQ----SADVICCTCVGAGDPRLANF--RFRQVLID 558
R + RE Q A ++C T GAG L N F V+ID
Sbjct: 1480 RQLDEIRDQSAMVNRNNDIRRREFMQQVLDEAHILCATLSGAGHDTLRNLNVEFETVIID 1539
Query: 559 ESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPI 618
E+ Q+ E LIP+ G K+ ++VGD QL P ++ ++A++ QSLF R+ + +
Sbjct: 1540 EAAQSIELSALIPMKFGCKKCIMVGDPKQLPPTVLSREASKFAYEQSLFVRMQKNHPESV 1599
Query: 619 R-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW--PVPNRPMFFYVQMG 675
L +QYRMHP++S FPS FY L++G + +S PW + P F+ +G
Sbjct: 1600 HLLSIQYRMHPAISSFPSEMFYNSQLEDGPDMTMLRSQ----PWHQSLFFGPYRFFNVVG 1655
Query: 676 QEEISASGTSYLNRTEAANV--EKIVTTFLRSGVVPSQIGVITPYEGQ-----RAYIVNY 728
QE +S ++ A + +++V F + +IG+ITPY+ Q + ++ Y
Sbjct: 1656 QEAMSGHSMKNIHEVNVALMIYKRLVADFPETN-FSGKIGIITPYKTQLHALRQKFVDTY 1714
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
Q+ + IE + D+FQGRE++ II SCVR+++ IGFL+D RR+NV LTRA
Sbjct: 1715 -------NDQILRTIEFNTTDAFQGREREIIIFSCVRASQKSTIGFLSDIRRMNVGLTRA 1767
Query: 789 RYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL-----KQSMVQFQKPKKIYN 843
R + +LGN L K W L+ + ++ EG L + +M Q +K
Sbjct: 1768 RSSLFVLGNANTLKKNEFWASLVENAQDRGYYTEGNFEQLLRRPCRTTMKQIEK------ 1821
Query: 844 DRRLFFGAGPGIVPNDIST 862
RL +G I P D ST
Sbjct: 1822 --RL---SGVSISPADAST 1835
>gi|355749514|gb|EHH53913.1| hypothetical protein EGM_14627, partial [Macaca fascicularis]
Length = 1042
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 226/423 (53%), Gaps = 30/423 (7%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + ++L+ + +NVAVD++
Sbjct: 586 PITIIHGVFGAGKSYLLAVVILFFVQLFEKSEAPTVGNARPWKLLISSSTNVAVDRVLLG 645
Query: 454 ISATGLK-VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G + +R+ S ++ P+ +LH + ++ + ELH L + +D
Sbjct: 646 LLSLGFENFIRV--GSVRKIAKPILPYSLHAGSEN-ESEQLKELHALMK-EDLTPTERVY 701
Query: 513 DEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL 572
K + K T R + + V+ TC P + + +F V++DE +Q TEP L+P+
Sbjct: 702 VRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPASLLPI 761
Query: 573 V-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRMHPSL 630
++++LVGD QL P I AA GL Q+LF+RL L+G KPI L+ QYR HP++
Sbjct: 762 ARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRCHPAI 821
Query: 631 SEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRT 690
S ++ FY+GTL NGVT ER W +P + FY G E+I S+ N
Sbjct: 822 SAIANDLFYKGTLMNGVTEIERSPL---LEW-LPT--LCFYNVKGLEQIERDN-SFHNVA 874
Query: 691 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 750
EA K++ + + SG+ S IGVIT Y+ Q + + +S + K ++V++VD+
Sbjct: 875 EATFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSAVDFGHPDI-KTVQVSTVDA 933
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
FQG EK+ IILSCVR+ + +GF++ +R+NVALTR + ++I+GN L K LW +
Sbjct: 934 FQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGKRHLLIVGNLACLRKNRLWGRV 990
Query: 811 LTH 813
+ H
Sbjct: 991 IQH 993
>gi|342873257|gb|EGU75464.1| hypothetical protein FOXB_14012 [Fusarium oxysporum Fo5176]
Length = 2080
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 186/620 (30%), Positives = 281/620 (45%), Gaps = 131/620 (21%)
Query: 407 ISLIQGPPGTGKTVTSAAIV-----YHMAKQG-QG----------------------QVL 438
+LIQGPPGTGKT T A+V +++ G QG ++L
Sbjct: 1355 FTLIQGPPGTGKTKTIVAMVGTLLSEQLSQSGNQGIPVGVPLRPNGAPGAPKQNRSKKLL 1414
Query: 439 VCAPSNVAVDQLAEKISATGLKVVRLCAKS--------REAVSSPVEHLTLHY------- 483
VCAPSN AVD+L ++ A G+K + K+ +A+++ V +TL
Sbjct: 1415 VCAPSNAAVDELVLRLKA-GVKTISGKTKNINVLRLGRSDAINAAVRDVTLDELVKARME 1473
Query: 484 --QVRHLDTSEKSELHK-LQQLKDEQGELSSS--------------------DEKKYKAL 520
Q + +++ +LH+ ++K+E G+L DE K + +
Sbjct: 1474 GDQTKDKAKADRDQLHENAGKVKEELGKLRPQLEAAKLMDDRTLYNKLSREFDELKRRQM 1533
Query: 521 -----------------------KRATEREISQSADVICCTCVGAGDPRLANFR---FRQ 554
+R ++EI +A V+C T G+G N F
Sbjct: 1534 SYGKQIDADKSSGNSVAREMEMRRRQVQQEILNNAQVLCATLSGSGHEMFRNLEDVEFET 1593
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
V+IDE+ Q E LIPL G + +LVGD QL P ++ + AA+ G QSLF R+
Sbjct: 1594 VIIDEAAQCVELSALIPLKYGCYKCILVGDPKQLPPTVLSQSAAKFGYDQSLFVRMQQNH 1653
Query: 615 LKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPV-----PNRPM 668
+ + L +QYRMHP +S FPS FYEG L +G ++E + PW P R
Sbjct: 1654 PRSVHLLDMQYRMHPEISLFPSREFYEGQLADGQNMHELRQQ----PWHKSALLGPYR-- 1707
Query: 669 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF---LRSGVVPSQIGVITPYEGQRAYI 725
FF VQ G +E G S +N E ++ F R + +IG+ITPY+ Q +
Sbjct: 1708 FFDVQ-GVQERGHKGQSLVNTKELDVAIQMYDRFSNEYRECDLTGKIGIITPYKAQLYEL 1766
Query: 726 VN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 784
N + SR G + + IE + D+FQGRE + II SCVR++ GIGF+ D RR+NV
Sbjct: 1767 RNRFRSRYG---ENITSIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVG 1823
Query: 785 LTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY-- 842
LTRA+ + ILG+ + L + W L+ + + G + ++ + ++ KP
Sbjct: 1824 LTRAKSSLWILGDSRALVQGEFWRKLIEDAQARDRYTNGDVLSMFRKPLEKAKPGAYLPP 1883
Query: 843 ----NDRRL-FFGAGPGIVPNDISTSNPNADRRGSRARGYMPPGPPNGTHKPGL---HPA 894
DR + A G + + +S PN+ + G P P TH PG+ A
Sbjct: 1884 PPQAQDRDVPMRDASLGT--SSLPSSRPNS----PKVEGAQQPTAPT-THIPGIGGGELA 1936
Query: 895 GFPMPRVPLPPFQGGPPSQP 914
G +PR PP S+P
Sbjct: 1937 GV-LPRSAGPPVIHTSSSKP 1955
>gi|302680102|ref|XP_003029733.1| hypothetical protein SCHCODRAFT_78153 [Schizophyllum commune H4-8]
gi|300103423|gb|EFI94830.1| hypothetical protein SCHCODRAFT_78153 [Schizophyllum commune H4-8]
Length = 708
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 238/479 (49%), Gaps = 83/479 (17%)
Query: 389 PELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L P ++ I GPPGTGKT T +++ + +GQ ++LVC SN+AV
Sbjct: 213 PTLNDSQKDAIRFCLGSPEVACIHGPPGTGKTHTLIELIWQLCARGQ-RLLVCGASNLAV 271
Query: 448 DQLAEKISA-------TGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE-----KSE 495
D + E++ A + LKV R+ +R + V TL Q D + K+E
Sbjct: 272 DNILERLLALPADSRTSRLKVTRVGHPARVMANEDVLDATLEVQAGRTDAAALAKDVKAE 331
Query: 496 LH---------------------KLQQLKDEQGELSSSDEKKYKALKRATEREISQSADV 534
L + +++ DE L K+Y+ + + + A V
Sbjct: 332 LEAALGVLSGKGKGAKGKAPRGLERKKMWDEVKAL----RKEYRQREGGVVKSVLSEAQV 387
Query: 535 ICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMC 594
+ TC AG+ +L + F V+IDE+TQA E C +P + AK++VL GD QL P I+
Sbjct: 388 VLATCHTAGNRQLRSLDFDTVIIDEATQAVEAVCWVP-IFKAKKLVLAGDPMQLPPTILS 446
Query: 595 --------KKAARA-------GLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNS 637
K+ R L +LF+RL + I+ L+VQYRMH + FPS +
Sbjct: 447 IDKKGKDKKQRTRTPILRPPRTLETTLFDRLERMHGPSIKRMLKVQYRMHEDICAFPSKA 506
Query: 638 FYEGTLQNGVTINER------------QSSGI--DFPWPVPNRPMFFYVQMGQE-----E 678
Y G LQ ++ +R +S+GI D P+ + P+ F+ G E E
Sbjct: 507 LYGGKLQPDPSVAKRLLRDLPSVQIARESAGIGEDEDDPLAS-PVVFFDTAGCEYYERLE 565
Query: 679 ISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQ 738
S N EA V+ V ++GV+PSQI VITPY+ Q + + LR
Sbjct: 566 GDNDEGSRCNENEATIVKGWVGELTQAGVLPSQIAVITPYQAQLGLLTSL------LRPL 619
Query: 739 LYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 797
++E+ +VD QGREK+ +I+S VRSN+ + +GFL + RR+NVA+TRA+ + ++G+
Sbjct: 620 HGPDLEIGTVDGMQGREKEAVIISMVRSNDKREVGFLKEKRRMNVAMTRAKRQLCVVGD 678
>gi|2498040|sp|Q60560.1|SMBP2_MESAU RecName: Full=DNA-binding protein SMUBP-2; AltName:
Full=ATP-dependent helicase IGHMBP2; AltName:
Full=Immunoglobulin mu-binding protein 2; AltName:
Full=Insulin II gene enhancer-binding protein; AltName:
Full=RIPE3B-binding complex 3B2 p110 subunit;
Short=RIP-1
gi|290919|gb|AAB00104.1| insulin II gene enhancer-binding protein [Mesocricetus auratus]
Length = 989
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 154/460 (33%), Positives = 227/460 (49%), Gaps = 51/460 (11%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ AV L Q+ +++I GPPGTGKT T I+ KQG ++L CAPSNVAVD
Sbjct: 191 LDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGL-KILCCAPSNVAVDN 249
Query: 450 LAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELHKL 499
L E+++ +++RL +R +AV + ++ + +R D + +K
Sbjct: 250 LVERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRK-DIDQVFGKNKK 308
Query: 500 QQLKDEQGELSSSDEKKYKALKRATEREISQS---ADVICCTCVGAGD----PRLANFRF 552
Q K E+ + + K LK E I QS ADV+ T GA L F
Sbjct: 309 TQDKREKSNFRNEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPENHF 368
Query: 553 RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 612
V++DE QA E C IPL L A + +L GDH QL P + KAA AGL++SL ERLV
Sbjct: 369 DVVVVDECAQALEASCWIPL-LKAPKCILAGDHRQLPPTTISHKAALAGLSRSLMERLVE 427
Query: 613 L-GLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQN-------------GVTINERQSSGI 657
G +R L VQYRMH +++ + S + Y G L GV E S
Sbjct: 428 KHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETS--- 484
Query: 658 DFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
P + + +++ +E+ + G N E V + + +GV I VI P
Sbjct: 485 -VPLLLIDTAGCGLLELDEEDSQSKG----NPGEVRLVTLHIQALVDAGVHAGDIAVIAP 539
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q + +S + E+E+ SVD FQGREK+ +IL+ VRSN +GFL +
Sbjct: 540 YNLQVDLLRQSLSNK-------HPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAE 592
Query: 778 PRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
RR+NVA+TRAR + ++ + + ++ L+ ++ EH
Sbjct: 593 DRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVDYFTEH 632
>gi|401840571|gb|EJT43340.1| HCS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 682
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 165/551 (29%), Positives = 269/551 (48%), Gaps = 61/551 (11%)
Query: 302 VIKLTAQEEVALELRASQGVPVDINHGFSVDFVWKST---SFDRMQGAMKTFAVDETSVS 358
VI + ++ + L SQ V + ++ ++ K+T ++ RM+ M+ + + V
Sbjct: 116 VIYKMSDTQITIALEESQDVIATTFYSYNKLYILKTTNTVTYKRMESTMRKLSEFTSPVQ 175
Query: 359 GYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGK 418
I +L+ + V ++ + G+ P LN SQ A+ +++I GPPGTGK
Sbjct: 176 DKITQYLVNERLFVP--KSGELQNVGSFLNPNLNDSQKAAINFATNNDLTIIHGPPGTGK 233
Query: 419 TVTSAAIVYHM-AKQGQGQVLVCAPSNVAVDQLAEKIS--ATGLKVVRLCAKSREAVSSP 475
T T ++ + K + ++L+C PSN++VD + E+++ + ++R+ +R S+
Sbjct: 234 TFTLIELIQQLLIKNPEKRILICGPSNISVDTILERLTPLVSNNLLLRIGHPARLLDSNK 293
Query: 476 VEHLTLHYQVRHLDTSEKSELHKLQQ----LKDEQGELSSSDEKKY--KALKR---ATER 526
L + + + E+ KL Q LK+ + + +E K K LK+ T +
Sbjct: 294 RHSLDILSKKNTIVRDISQEIDKLIQENKKLKNYKQRRENWNEIKLLRKDLKKREFKTIK 353
Query: 527 EISQSADVICCTCVGA----------GDPRLANFRFRQVLIDESTQATEPECLIPLVLGA 576
++ + ++ T G+ DP L F ++IDE +QA EP+C IPL+
Sbjct: 354 DLIIQSRIVVTTLHGSSSRELCSLYRNDPNLK--LFDTLIIDEVSQAMEPQCWIPLIAHQ 411
Query: 577 KQ---VVLVGDHCQLGPVIMCKKAARA--GLAQSLFERLVLLGLKPIR-----LQVQYRM 626
Q ++L GD+ QL P I + L +LF+RL L + P R L +QYRM
Sbjct: 412 NQFDKLILAGDNKQLPPTIKTEDDQNVIRNLETTLFDRL--LKIFPKREMIKFLNIQYRM 469
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN--------RPMFFYVQMGQE- 677
+ + EFPS S Y G L T+ R I P+ P+ +Y G E
Sbjct: 470 NEKIMEFPSQSMYHGKLIADATVASRLLIDISSVDVSPSGDDDIDTKLPLIWYDTQGDEF 529
Query: 678 -----EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRN 732
+ + G+ Y N E A V+K + + V IGVI+PY Q +++ + +
Sbjct: 530 PETADDATILGSKY-NEGEIAIVKKYIESLKSLNVQQDSIGVISPYNAQVSHLKRLI--H 586
Query: 733 GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 792
G L IE+++VD FQGREKD IILS VRSNE +GFL + RRLNVA+TR R +
Sbjct: 587 GKLE---LNNIEISTVDGFQGREKDVIILSLVRSNEEFEVGFLKEERRLNVAMTRPRRQL 643
Query: 793 VILGNPKVLSK 803
V++GN +VL +
Sbjct: 644 VVVGNIEVLQR 654
>gi|154291609|ref|XP_001546386.1| hypothetical protein BC1G_15073 [Botryotinia fuckeliana B05.10]
Length = 2019
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 246/538 (45%), Gaps = 107/538 (19%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAK--------------QGQ 434
+LN Q A+ S +LIQGPPG+GKT T A+V + QGQ
Sbjct: 1320 KLNNGQAKAILSANDNDGFTLIQGPPGSGKTKTIIAMVGALLSQVLQQQAQQVGFRPQGQ 1379
Query: 435 G--------------QVLVCAPSNVAVDQLAEKI-------SATGLKVVRLCAKSREAVS 473
++L+CAPSN AVD+L ++ S + K+ + +A++
Sbjct: 1380 NRSAGAQAQAQAPKKKLLICAPSNAAVDELVLRLKEGILPLSGSHQKINVIRVGRSDAIN 1439
Query: 474 SPVEHLTLHYQVR--------------------HLD--------------------TSEK 493
S V+ +TL VR H D T +K
Sbjct: 1440 SSVKDVTLDELVRIKLEGDQESKKGQLNDREVLHRDAGLIKERLSVLRPEMEKCRATGDK 1499
Query: 494 SELHKLQ----QLKDEQGELSSSDEKKYKALKRATEREISQS---------ADVICCTCV 540
+ KLQ +LK +Q + + ++ ++ + + EIS+ A V+C T
Sbjct: 1500 TSELKLQREFDELKRKQAHIGNKIDEDKESDNKVRQNEISRRHFTQEIIDGAHVLCATLS 1559
Query: 541 GAGDP--RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
G+G R N F V+IDE+ Q E LIPL GA + +LVGD QL P ++ + A
Sbjct: 1560 GSGHDFLRNVNVEFETVIIDEAAQCIELSALIPLKYGATKCILVGDPEQLPPTVLSRLAK 1619
Query: 599 RAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
G QSLF R+ + L QYRMHP +S FPS FY L +G + + +
Sbjct: 1620 SYGYEQSLFVRMQRNHPDDVHLLDTQYRMHPEISRFPSQQFYNSRLIDGDGMAQLRVQ-- 1677
Query: 658 DFPWPVPNR--PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQI 712
PW + P F+ +G + A G S +N E A + + + T RS +I
Sbjct: 1678 --PWHASSILGPYRFFDVVGVQSKEARGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKI 1735
Query: 713 GVITPYEGQRAYIVNYMSRNGALR--QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+IT Y+ Q +N + R + ++++EIE + D+FQGRE++ II SCVR+
Sbjct: 1736 GIITTYKAQ----LNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAG 1791
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL 828
GIGFLND RR+NV LTRA+ + +LG+ + L + WN L+ K E G + L
Sbjct: 1792 GIGFLNDIRRMNVGLTRAKSSLWVLGDSRALEQGEFWNRLIQDAKSRERYTSGDIMGL 1849
>gi|336274090|ref|XP_003351799.1| hypothetical protein SMAC_00344 [Sordaria macrospora k-hell]
gi|380096080|emb|CCC06127.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 712
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 237/468 (50%), Gaps = 66/468 (14%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P LN SQ A++ L R I+LI GPPGTGKT T ++ + ++ ++LVC PSN++V
Sbjct: 228 PTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLLRRDL-RILVCGPSNISV 286
Query: 448 DQLAEKISATGLKVVRLCAKSR---EAVSSPVEHLT-------LHYQVRHLDTSEKSELH 497
D + E++S L ++RL +R +S ++ LT + VR ++++ +
Sbjct: 287 DNIVERLSPHKLPILRLGHPARLLPSVLSHSLDVLTTTSDAGAIVKDVRAEMDAKQASIR 346
Query: 498 KLQQLKDEQ---GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 554
K + ++ + EL ++ + +R + +S V+ T GAG L N F
Sbjct: 347 KTRNGRERRVVYTELKELRKEYRERERRCVSDLVGRSK-VVLATLHGAGGYHLKNEEFDV 405
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVI--MCKKAARAG--------LAQ 604
V+IDE++QA E +C +PL L AK+ VL GDH QL P I + KA++ L
Sbjct: 406 VIIDEASQALEAQCWVPL-LWAKKAVLAGDHLQLPPTIKSLNSKASKGDQPKERGPTLET 464
Query: 605 SLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWP 662
+LF+RL+ L I+ L QYRMH + FPS+ YE L + ER D +
Sbjct: 465 TLFDRLLALHGPAIKRMLTTQYRMHEKIMRFPSDELYESKLVAAEHVRERLLK--DLLYE 522
Query: 663 VPN-----RPMFFYVQMG-------QEEI---------------SASGTSYLNRTEAANV 695
V + P+ F G +EE+ S G S N EAA V
Sbjct: 523 VEDNDDTTEPLVFIDTQGGDFPEKNEEELDNNGSATDKKKAIKRSLHGESKSNEMEAALV 582
Query: 696 EKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGRE 755
++ V + + +GV P I V+TPY Q + + L+ + + IE+ SVD FQGRE
Sbjct: 583 KQHVRSLVEAGVRPEDIAVVTPYNAQLSIL-------APLKDE-FPGIELGSVDGFQGRE 634
Query: 756 KDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
K+ +I S VRSN+ +GFL + RRLNVA+TR + + ++G+ + + K
Sbjct: 635 KEAVIFSLVRSNDEGAVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKK 682
>gi|302921016|ref|XP_003053198.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734138|gb|EEU47485.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 2035
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 252/551 (45%), Gaps = 115/551 (20%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ------------- 436
LN Q AV +LIQGPPGTGKT T A+V + + Q
Sbjct: 1314 LNRGQAMAVLGAHDNDGFTLIQGPPGTGKTKTIVAMVGTLLSEQLSQMNNTGVPVGVPLR 1373
Query: 437 ---------------VLVCAPSNVAVDQLAEKISA---------TGLKVVRLCAKSREAV 472
+LVCAPSN AVD+L ++ + + V+RL +A+
Sbjct: 1374 PNGAPAANNQARSKKLLVCAPSNAAVDELVLRLKSGIKTTSGKTRNINVIRLGRS--DAI 1431
Query: 473 SSPVEHLTLHYQVR-------------------HLDTSE-KSEL---------------- 496
++ V+ +TL V+ H D + K EL
Sbjct: 1432 NAAVKDVTLDELVKARLEGDGTKDKAKADRDKLHEDAGKIKEELSLLRPRLEASRDGDDR 1491
Query: 497 -------HKLQQLKDEQ---GELSSSDE-------KKYKALKRATEREISQSADVICCTC 539
+ ++LK Q G+ +D+ ++ + +R ++EI SA V+C T
Sbjct: 1492 GLYNRLSREFEELKRRQMSIGKQIDADKSSGNSVAREMELRRRQVQQEILNSAQVLCATL 1551
Query: 540 VGAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKA 597
G+G N F V+IDE+ Q E LIPL G + +LVGD QL P ++ + A
Sbjct: 1552 SGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSA 1611
Query: 598 ARAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
A+ G QSLF R+ K + L +QYRMHP +S FPS FYEG L +G ++E +
Sbjct: 1612 AKFGYDQSLFVRMQQNHPKSVHLLDMQYRMHPEISMFPSREFYEGQLADGQNMHELRQQ- 1670
Query: 657 IDFPWPV-----PNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV---V 708
PW P R FF VQ G +E G S +N E ++ F + +
Sbjct: 1671 ---PWHKSALLGPYR--FFDVQ-GVQERGHRGQSLVNTKELDVAMQLYDRFSKEYQQCDL 1724
Query: 709 PSQIGVITPYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 767
+IG+ITPY+ Q + N + SR G + + IE + D+FQGRE + II SCVR++
Sbjct: 1725 TGKIGIITPYKAQLYELRNRFRSRYG---EAITNIIEFNTTDAFQGRECEIIIFSCVRAS 1781
Query: 768 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNN 827
GIGF+ D RR+NV LTRA+ + ILG+ + L + W L+ + + +G + N
Sbjct: 1782 STGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIEDAQARDRYTKGDILN 1841
Query: 828 LKQSMVQFQKP 838
+ + ++ KP
Sbjct: 1842 MFRRPLEKAKP 1852
>gi|13904994|gb|AAH06779.1| BC006779 protein, partial [Mus musculus]
Length = 717
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 228/497 (45%), Gaps = 77/497 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ------------- 436
+LN SQ AV+S LQ+ ++IQGPPGTGKTV IVY + Q Q
Sbjct: 195 KLNQSQDRAVRSALQKQFTVIQGPPGTGKTVVGFHIVYWFHRSNQEQMPTDSSPSGEEQL 254
Query: 437 ----VLVCAPSNVAVDQLAEKI--SATGLKVVRLCAKSREAVSSPV-------------- 476
VL C PSN +VD L + T +K +R+ + EA P+
Sbjct: 255 GGPCVLYCGPSNKSVDVLGGLLLRRKTEMKPLRVYGEQAEATEFPLPGVSNRSLFGKTSQ 314
Query: 477 --------EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK-ALKRATERE 527
+TLH+++R +E+ K E S D + Y+ L +A + E
Sbjct: 315 EGRPNQSLRSITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLRVYRRVLGKARKHE 374
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAK---QVVLVGD 584
+ + + VI CTC A L RQ+LIDE+ ATEPE LIPLV +K +VVL+GD
Sbjct: 375 LERHS-VILCTCSCAASKSLKILNVRQILIDEAGMATEPETLIPLVCFSKTVEKVVLLGD 433
Query: 585 HCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
H QL PV+ ++ G+ +SLFER I L QYRMH + FPS FY G L+
Sbjct: 434 HKQLRPVVKSEQLQSLGMDRSLFER---YHRDAIMLDTQYRMHKDICSFPSVEFYGGKLK 490
Query: 645 NGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF-- 702
+ R+ I P+ + F G E+ T N AN E++
Sbjct: 491 TWSDL--RRLPSILGHTGKPSCSVIFGSVQGHEQKLLVSTEDGNENSRANPEEVTQVVRI 548
Query: 703 -----LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKD 757
L V P I V+TPY Q A I + L Q+ + V S+ QG E
Sbjct: 549 IKQLTLDRTVDPKDIAVLTPYNAQAAAI------SRGLMQRGVTGVTVTSITKSQGSEWR 602
Query: 758 YIILS----CVRSNEHQG---------IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ 804
Y+I+S C RS+ Q +GF+ DP ++NVA+TRA+ + I+G+ +L
Sbjct: 603 YVIVSTVRTCPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCC 662
Query: 805 PLWNGLLTHYKEHECLV 821
PLW+ LL + LV
Sbjct: 663 PLWHRLLDFCEAQHSLV 679
>gi|225432728|ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis vinifera]
gi|297737082|emb|CBI26283.3| unnamed protein product [Vitis vinifera]
Length = 877
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 251/527 (47%), Gaps = 87/527 (16%)
Query: 328 GFSVDFVWKST---------SFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNT 378
GF+ +F+W T +++R+ A+D S G L + ++++ T
Sbjct: 329 GFAKEFIWHHTDESLYNVRFTYNRVNMRRLYQAID--SAKGLEMDLLFPSDSRRRLIKAT 386
Query: 379 --LPRRFGAPGLPELNASQVFAVKSVLQ---RPISLIQGPPGTGKTVTSA-AIVYHMAKQ 432
+P F LN Q+F++K +L P +I GPPGTGKT T AI+ Q
Sbjct: 387 HMVPISFN------LNEEQIFSIKMILGCRGAPPYVIHGPPGTGKTKTMVEAILQLYLTQ 440
Query: 433 GQGQVLVCAPSNVAVDQLAEKISAT------GLKVVRLCAKSREAVSSPVEHLTLHYQVR 486
++LVCAPSN A D L E++ A G ++ RL A SR P E + + +R
Sbjct: 441 KNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRLNATSR-----PYEDMNPDF-IR 494
Query: 487 HLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPR 546
+ + + K L +D K+Y+ + IS G
Sbjct: 495 FCFSEDL--IFKCPPL---------NDLKRYRII-------ISTYMSAALLYAEG----- 531
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQ---VVLVGDHCQLGPVIMCKKAARAGLA 603
+ F +L+DE+ QA+EPE +IPL ++ VVL GD QLGPVI K A L
Sbjct: 532 VKRSHFSHILLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLG 591
Query: 604 QSLFERLVLLGLK-------PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
+S ERL +L YR HP + PS FY+G L + + +SS
Sbjct: 592 KSYLERLFECEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGEL---IPCKDDKSSS 648
Query: 657 IDFPWPVPNR--PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF-LRSGVVPSQIG 713
+ + +PNR P+ F G +E S S+ NRTEA+ V +I+ + + IG
Sbjct: 649 MTWAEILPNRDFPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIG 708
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS------- 766
VITPY Q + AL I+V SV+ FQG+E++ II+S VRS
Sbjct: 709 VITPYRQQ------VLKLKKALEGVDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEF 762
Query: 767 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
+++ +GFL++PRR NVA+TRA+ ++I+GNP ++SK WN +L H
Sbjct: 763 DKNHCLGFLSNPRRFNVAITRAKSLLIIIGNPHIISKDLYWNKILWH 809
>gi|125347767|ref|NP_898985.2| PPAR gamma-DNA-binding domain interacting protein1 [Mus musculus]
Length = 2947
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 227/499 (45%), Gaps = 77/499 (15%)
Query: 390 ELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ------------- 436
+LN SQ AV+S LQ+ ++IQGPPGTGKTV IVY + Q Q
Sbjct: 2448 KLNQSQDRAVRSALQKQFTVIQGPPGTGKTVVGFHIVYWFHRSNQEQMPTDSSPSGEEQL 2507
Query: 437 ----VLVCAPSNVAVDQLAEKI--SATGLKVVRLCAKSREAVSSPV-------------- 476
VL C PSN +VD L + T +K +R+ + EA P+
Sbjct: 2508 GGPCVLYCGPSNKSVDVLGGLLLRRKTEMKPLRVYGEQAEATEFPLPGVSNRSLFGKTSQ 2567
Query: 477 --------EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK-ALKRATERE 527
+TLH+++R +E+ K E S D + Y+ L +A + E
Sbjct: 2568 EGRPNQSLRSITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLRVYRRVLGKARKHE 2627
Query: 528 ISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAK---QVVLVGD 584
+ + + VI CTC A L RQ+LIDE+ ATEPE LIPLV +K +VVL+GD
Sbjct: 2628 LERHS-VILCTCSCAASKSLKILNVRQILIDEAGMATEPETLIPLVCFSKTVEKVVLLGD 2686
Query: 585 HCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 644
H QL PV+ ++ G+ +SLFER I L QYRMH + FPS FY G L+
Sbjct: 2687 HKQLRPVVKSEQLQSLGMDRSLFER---YHRDAIMLDTQYRMHKDICSFPSVEFYGGKLK 2743
Query: 645 NGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF-- 702
+ R+ I P+ + F G E+ T N AN E++
Sbjct: 2744 TWSDL--RRLPSILGHTGKPSCSVIFGSVQGHEQKLLVSTEDGNENSRANPEEVTQVVRI 2801
Query: 703 -----LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKD 757
L V P I V+TPY Q A I + + G + V S+ QG E
Sbjct: 2802 IKQLTLDRTVDPKDIAVLTPYNAQAAAISRGLMQRGV------TGVTVTSITKSQGSEWR 2855
Query: 758 YIILS----CVRSNEHQG---------IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQ 804
Y+I+S C RS+ Q +GF+ DP ++NVA+TRA+ + I+G+ +L
Sbjct: 2856 YVIVSTVRTCPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCC 2915
Query: 805 PLWNGLLTHYKEHECLVEG 823
PLW+ LL + LV
Sbjct: 2916 PLWHRLLDFCEAQHSLVSA 2934
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 206/526 (39%), Gaps = 81/526 (15%)
Query: 349 TFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQR--- 405
TF +V + HL+ ++ TLP + P N Q AV + R
Sbjct: 723 TFRFWHQAVDALLEEHLVVPDLPA----CTLPHPWPTPPSFRGNHKQKLAVGLIAGRRPE 778
Query: 406 -----PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLK 460
P LI GP GTGKT T A + +Q +VL+C +N A D
Sbjct: 779 GTKHIPPLLIYGPFGTGKTYTLAMAALEVVQQPHTKVLICTHTNSAAD------------ 826
Query: 461 VVRLCAKSREAVSS---PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKY 517
+ + + VSS L + Y R ++ + L +D Q
Sbjct: 827 -IYIREYFHDYVSSGHPEATPLRVMYADRPPRQTDPTTLQYCCLTEDRQ----------- 874
Query: 518 KALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL--VLG 575
A + T E+ V+ T A F F + IDE+ Q E E LIPL L
Sbjct: 875 -AFRPPTGPELVHHRLVVTTTSQARELQVPAGF-FSHIFIDEAAQMLECEALIPLSYALS 932
Query: 576 AKQVVLVGDHCQLGPVIMC---KKAARAGLAQSLF-----ERLVLLGLKPIRLQVQYRMH 627
+VVL GDH Q+ P + K+AR L LF E + I YR
Sbjct: 933 LTRVVLAGDHMQVTPRLFSVPRDKSARHTLLHRLFLYYQQEAHKIAQQSRIIFHENYRST 992
Query: 628 PSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 687
++ F S+ FY L G N Q+SG P + P+ F G E S TS+L
Sbjct: 993 AAIINFVSHHFY---LAKG---NPIQASG-KVPRHPQHYPLMFCHVAGSPEQDMSMTSWL 1045
Query: 688 NRTEAANV-EKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK----E 742
N E V EK+ + P G P E + V++ ++ ALRQ+L + E
Sbjct: 1046 NSAEVTQVVEKVREIY---NTWPHCWG---PREQRHICAVSHGAQVSALRQELRRRNLGE 1099
Query: 743 IEVASVDSFQGREKDYIILSCVRS-NEHQGIG-----FLNDPRRLNVALTRARYGIVILG 796
+ V S + GRE ++LS V + N G F +PR LN +TRA+ +V +G
Sbjct: 1100 VSVGSFEILPGREFRVVVLSSVHNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVG 1159
Query: 797 NPKVLSK----QPLWNGLLTHYKEHECLV--EGPLNNLKQSMVQFQ 836
+ L + LW + EH E L ++Q + Q Q
Sbjct: 1160 DAVALCSSGACRNLWRSFIRECIEHHSAFPEELSLEQIEQGVAQRQ 1205
>gi|330995988|ref|ZP_08319882.1| putative DNA helicase [Paraprevotella xylaniphila YIT 11841]
gi|329573985|gb|EGG55563.1| putative DNA helicase [Paraprevotella xylaniphila YIT 11841]
Length = 659
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 148/478 (30%), Positives = 237/478 (49%), Gaps = 65/478 (13%)
Query: 388 LPELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVA 446
P LN +Q AV VL+ + + ++ GPPGTGKT T +Y + + QVLVCA SN+A
Sbjct: 192 FPWLNPTQETAVNEVLRAKDVMIVHGPPGTGKTTTLVEAIYETLHR-ESQVLVCAQSNMA 250
Query: 447 VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ-LKDE 505
VD ++EK++ G+ V+R+ SR V+ + L+ Y+ R L +++ ++D
Sbjct: 251 VDWISEKLTDRGVAVLRIGNPSR--VNDKM--LSFTYERRFEAHPSYPSLWAIRKAIRDL 306
Query: 506 QGELSSSDEKKY-----KALKRATEREIS------QSADVICCTCVGAGDPRLANFRFRQ 554
SS + + + RATE EI+ VI CT G+ + LA +F
Sbjct: 307 YAHRPSSGREAFHQKIARLRDRATELEIAINESLFNETRVIACTLTGSANRVLAGKKFST 366
Query: 555 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 614
+ IDE+ QA E C I + A +V+L GDH QL P + C +A + GL ++L E +
Sbjct: 367 LFIDEAAQALEASCWIA-IQKAGRVILAGDHRQLPPTVKCPEAMKGGLDRTLMETIAARQ 425
Query: 615 LKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQ 673
+ L + QYRM+ ++ F S FY+G +++ + R GI W P ++
Sbjct: 426 PSAVSLLRTQYRMNDAIMHFSSECFYDGKVESAPEVKYR---GI-LDWDTPME----WID 477
Query: 674 MGQEEISA------------------------------SGTSYLNRTEAANVEKIVTTFL 703
EE +A TS N EA I+ +
Sbjct: 478 TADEEQTAPYLTEEPSNPVSAPAPPTAGIPDFEETRNPDSTSRSNPEEARLTLNILKAYF 537
Query: 704 ----RSGVVPSQI--GVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKD 757
+ ++ +I G+I+PY+GQ ++ + R A + + V +VD FQG+E+D
Sbjct: 538 QKIGKERILAERIDTGLISPYKGQ-VQLLRTLLRRDAFFKPYRHLLSVNTVDGFQGQERD 596
Query: 758 YIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
I++S VRSNE+ IGFL+D RR+NVA+TRAR ++++GN L + P + + ++ K
Sbjct: 597 VILISLVRSNENGQIGFLHDLRRMNVAITRARMKLILVGNSHTLCRTPFYKLMYSYIK 654
>gi|393243189|gb|EJD50704.1| hypothetical protein AURDEDRAFT_83748 [Auricularia delicata TFB-10046
SS5]
Length = 2008
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 183/674 (27%), Positives = 281/674 (41%), Gaps = 138/674 (20%)
Query: 277 LVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDINHGFSVDFVWK 336
L D + LR D +++ V T+ A EL+A+ + D + G V W+
Sbjct: 1202 LAETDIVLLRSGADETK---KTLAKVQNATSSNHGARELKATLRILEDADPGLQVGTNWQ 1258
Query: 337 STSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVR------NTLPRRFGAPGLPE 390
R ++ T + S+ Y+ L H ++ + + R + E
Sbjct: 1259 L----RKVFSLSTLNREYASLVALPYYDLSEHILQAHPAETRPYDPDEVRRTMKNQKVNE 1314
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHM--------------------A 430
A + A K+ L+QGPPGTGKT T +V +
Sbjct: 1315 PQAKAILASKNAAG--FLLVQGPPGTGKTWTICGMVGAFMSNRPKPATEIQAGRAAAPAS 1372
Query: 431 KQGQGQVLVCAPSNVAVDQLAEKI-----SATGLKVV----RLCAKSREAVSSPVEHLTL 481
K ++L+CAPSN +D++A+++ ++G +VV R+ S +V++ V+HLTL
Sbjct: 1373 KPHPKKILICAPSNAGIDEVAKRLCDGVLDSSGRRVVPNVVRIGVDS--SVNTSVKHLTL 1430
Query: 482 HYQV----------------------------------------------RHLDTSE--- 492
YQV R DT
Sbjct: 1431 DYQVERKLAGPGAPTAKNEPQVDTNALRAELASVKAALEQKFDESNKLQARQADTKAVQD 1490
Query: 493 -----KSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRL 547
KS+ + Q D + ++ + A +R E+ ADVIC T GAG L
Sbjct: 1491 QINILKSKRFAISQKLDNARDKQKAETRALDAARRKFRTEVLLEADVICSTLAGAGHDTL 1550
Query: 548 ANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLF 607
F F V+IDE+ Q+ E LIPL G K+ V+VGD QL P ++ K+A QSLF
Sbjct: 1551 ETFEFETVVIDEAAQSIELSSLIPLRYGCKRCVMVGDPQQLPPTVISKRATHFKYNQSLF 1610
Query: 608 ERLVLLGLKPIRL--------------------QVQYRMHPSLSEFPSNSFYEGTLQNGV 647
R+ K L +QYRMHP +S PS FY G L++G
Sbjct: 1611 VRIFERKPKAAHLLRHVPNSSHPHLCRTQRLHHSIQYRMHPDISLIPSKLFYGGNLKDGP 1670
Query: 648 TINERQSSGIDFPW---PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL- 703
+ ++ + PW + FF + G E +A G S +NR E + FL
Sbjct: 1671 DM----AAKTEQPWHASELLGTYRFFNIAQGHHENAAVGLSLVNRAEVDAALALYEAFLS 1726
Query: 704 --RSGVVPSQIGVITPYEGQRAYIVNYMSR--NGALRQQLYKEIEVASVDSFQGREKDYI 759
+ +IGVI+ Y+ Q +N + R G + +++ +VD FQG+EKD I
Sbjct: 1727 QYSDQDMSHRIGVISMYKAQ----INALQRAFEGRYGADIKNKLDFNTVDGFQGQEKDII 1782
Query: 760 ILSCVRSNEH-QGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK-QPLWNGLLTHYKEH 817
ILSCVR+ IGF+ D RRLNV++TRAR + ILG+ L + W ++ +
Sbjct: 1783 ILSCVRAGPRVTDIGFVKDVRRLNVSITRARSSLFILGHAATLERGDDTWRQIVEDARAR 1842
Query: 818 ECLVEGPLNNLKQS 831
LV+ + + +
Sbjct: 1843 GFLVDAEASTFRNA 1856
>gi|403223698|dbj|BAM41828.1| tRNA-splicing endonuclease [Theileria orientalis strain Shintoku]
Length = 798
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 227/462 (49%), Gaps = 52/462 (11%)
Query: 392 NASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQG--QVLVCAPSNVAVD 448
N+ Q+ AV S++ ISLIQGPPGTGKT T IV H+ + ++L+CAPSN A+D
Sbjct: 300 NSGQLSAVSNSLMTEGISLIQGPPGTGKTTTIMGIVIHLGSENHSNRRILICAPSNAAID 359
Query: 449 QLAEK-ISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHK--LQQLKDE 505
++ ++ +S G + V+ + + L+T K L K L LK +
Sbjct: 360 EIVKRLVSPDGGIFDPQGNRYNPTVTRVGPNFHEDLKEYSLETKLKKWLSKNNLSHLKGD 419
Query: 506 QGELSSSDEKKYKALKRATE-REISQSADVICCTCVGAGDPRLANFR--FRQVLIDESTQ 562
+G + KR T +I +++++C T G G L F ++IDE+TQ
Sbjct: 420 RGNTA----------KRPTIIMDILLNSEIVCSTLSGCGSRELYGLINCFDTLIIDEATQ 469
Query: 563 ATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQV 622
A E LIP LG K+ +LVGD CQL + K A + QSLF+RL L G L++
Sbjct: 470 AVELSTLIPFNLGCKRAILVGDPCQLSATVCSKVAIQLNYDQSLFKRLQLCGYPVNFLKL 529
Query: 623 QYRMHPSLSEFPSNSFYEGTLQNG-VTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISA 681
QYRM P ++ FPS FY+ L N ++++ + FP RP F+ E S
Sbjct: 530 QYRMDPLITRFPSMYFYQNQLINAKKSLSKPEEDWRQFPL---FRPTVFFAIDSHE--SR 584
Query: 682 SGTSYLNRTEAANVEKIVTTFLR---------SGVVPSQIGVITPYEGQRAYIVNYMSRN 732
+ TSY+N E V +++ + + + +I VI+PY Q + + +S+
Sbjct: 585 NDTSYVNEMEVDLVCQLLEMLIEIMSTIPGITAEEIARKIAVISPYAAQAEILKSTISQR 644
Query: 733 GALRQQL------------YKEIEVASVDSFQGREKDYIILSCVRSNEHQ------GIGF 774
+ Q +I V++VD FQG EKD II S VR+N F
Sbjct: 645 IKINPQTNVPDYSKITPSKTNQIYVSTVDGFQGMEKDIIIFSAVRTNYVDLTANVIDASF 704
Query: 775 LNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 816
+ D RR+NVA+TRA ++I+GNP+ L W+ L HY +
Sbjct: 705 IADRRRINVAITRACSNLLIVGNPRYLLDHKHWSALYNHYAK 746
>gi|254565491|ref|XP_002489856.1| Hexameric DNA polymerase alpha-associated DNA helicase A involved
in lagging strand DNA synthesis [Komagataella pastoris
GS115]
gi|238029652|emb|CAY67575.1| Hexameric DNA polymerase alpha-associated DNA helicase A involved
in lagging strand DNA synthesis [Komagataella pastoris
GS115]
gi|328350271|emb|CCA36671.1| hypothetical protein PP7435_Chr1-0519 [Komagataella pastoris CBS
7435]
Length = 726
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 150/462 (32%), Positives = 245/462 (53%), Gaps = 60/462 (12%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAK---QGQGQVLVCAPSNVAV 447
LN SQ A+ LQ PI++I GPPGTGKT T +V + K ++L+C PSN++V
Sbjct: 241 LNDSQREAINFALQSPITIIHGPPGTGKTSTLVELVRQLVKARGSSSKRILICGPSNISV 300
Query: 448 DQLAEKI-------SATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE--KSELHK 498
D + E++ + + K++R+ +R +SS + H +L ++ +++E K + +
Sbjct: 301 DTILERLDDLYPNKADSMSKLIRVGHPAR-LLSSILNH-SLELLIQGSESNEILKDIIKE 358
Query: 499 LQQLKDEQGELSSSDEKK--YKALK----------RATEREISQSADVICCTCVGAGDPR 546
+Q L + ++ S E+K Y +K R E+ +S+ V+ T GA
Sbjct: 359 IQDLMKKSKKMKSYRERKDCYLDVKNLRKDLRERARKITSELIRSSQVVVSTLHGASSRE 418
Query: 547 LANFR-------FRQVLIDESTQATEPECLIPLV--LGAKQVVLVGDHCQLGPVIMC--- 594
L + F ++IDE +Q+ EP+C IPL+ G ++++ GD+ QL P I
Sbjct: 419 LFDAALNSQEGLFDTLIIDEVSQSLEPQCWIPLMAHTGINKLIIAGDNKQLSPTIKTLPE 478
Query: 595 ---KKAARAGLAQSLFERLVLL-GLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 649
K L+ +LF+RLV + G ++ L +QYRM+ + FPSN Y L ++
Sbjct: 479 GKQKSKVVDILSTTLFDRLVSIHGQSFVKFLNIQYRMNEKIMRFPSNELYGAKLIAHKSV 538
Query: 650 NERQSSGIDFPWPVPN-----RPMFFYVQMG-----QEEISASGTSYLNRTEAANVEKIV 699
+ + +D P+ V P+ +Y G QE G+ Y N EA V K V
Sbjct: 539 ANK--TCLDLPYRVEETDDTIEPLIWYDTQGDEFPEQETEEDQGSKY-NENEALLVAKHV 595
Query: 700 TTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
L++GV+ + IG+I+PY Q +++ + NG QL E+E+++VD FQGREK+ I
Sbjct: 596 RILLKAGVLQTDIGIISPYNAQVSFLKELLI-NGD--DQL-TELEISTVDGFQGREKEII 651
Query: 760 ILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 801
IL+ VRSN + +GFL D RRLNV++TRA+ + ++G+ + L
Sbjct: 652 ILTLVRSNREKEVGFLKDFRRLNVSMTRAKKQLCVIGDMETL 693
>gi|365984191|ref|XP_003668928.1| hypothetical protein NDAI_0C00240 [Naumovozyma dairenensis CBS 421]
gi|343767696|emb|CCD23685.1| hypothetical protein NDAI_0C00240 [Naumovozyma dairenensis CBS 421]
Length = 699
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 164/530 (30%), Positives = 259/530 (48%), Gaps = 65/530 (12%)
Query: 327 HGFSVDFVWKST---SFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRF 383
+ F+ ++ K+T ++ RM+ M+ + E S I +LL ++ ++ +F
Sbjct: 154 YSFNRLYLLKTTNTITYKRMESTMRKLSEFEGIPSNKIIQYLLNERPFLKQTTSSNNIQF 213
Query: 384 GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 443
L N SQ A+K L IS+I GPPGTGKT T ++ + ++GQ ++LVC PS
Sbjct: 214 HNENL---NQSQREAIKFALINDISIIHGPPGTGKTYTLIELIQQLVERGQ-RILVCGPS 269
Query: 444 NVAVDQLAEKISAT--GLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTS 491
N++VD + E+++ G ++R+ +R + +S + + + H
Sbjct: 270 NISVDTILERLNGVLPGNLLLRIGHPARLLDSNLRHSLDILSKSGDAGAIVKDIYHDIDK 329
Query: 492 EKSELHKLQQLKDEQGELSSSDE--KKYKALKRATEREISQSADVICCTCVGAGDPRLAN 549
S + KL+ KD++ E K+ + +R ++ A V+ T G+ L
Sbjct: 330 TISGIKKLKSYKDKRESWKEVKELRKELRIRERKVINDLILEAKVVVATLHGSSSRDLCK 389
Query: 550 FR--------FRQVLIDESTQATEPECLIPLVLGAK----QVVLVGDHCQLGPVIMCK-- 595
F ++IDE +Q+ EP+C IPL+ K ++VL GD+ QL P I +
Sbjct: 390 LYNDESVTSLFDTLIIDEVSQSLEPQCWIPLISHYKSDISKLVLAGDNKQLPPTIKTEDN 449
Query: 596 KAARAGLAQSLFERLVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINER- 652
K + L +LF+RLV + R L VQYRM+ + EF SN YEG L VT+
Sbjct: 450 KLVQKLLQTTLFDRLVSIYGDQFRKLLNVQYRMNEEIMEFSSNEMYEGKLLADVTVASHL 509
Query: 653 --QSSGIDFPWPVPNRPMFFYVQMGQE---EISAS--------------GTSYLNRTEAA 693
SG+D + P+ +Y G E +S S +S N EA
Sbjct: 510 LSDLSGVDSNEDT-DIPLIWYDTQGDEFMESVSDSNTNNNNNNNNNNPLASSKFNENEAL 568
Query: 694 NVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQG 753
V+ V + S V IG+I+PY Q VN + +L + Y IE+++VD FQG
Sbjct: 569 VVKDHVEKLIASNVPQECIGIISPYSAQ----VNLLK---SLIRTDYPLIEISTVDGFQG 621
Query: 754 REKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 803
REK+ IILS VRSN+ +GFL+D RRLNVA+TR + + ++GN + L +
Sbjct: 622 REKEVIILSLVRSNDKFEVGFLSDDRRLNVAMTRPKRQLCVVGNIECLQR 671
>gi|328871491|gb|EGG19861.1| Regulator of nonsense transcripts [Dictyostelium fasciculatum]
Length = 1534
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 234/447 (52%), Gaps = 50/447 (11%)
Query: 379 LPRRFGAPGLPELNASQVFAVKS-VLQRPISLIQGPPGTGKTVTSAAI--VYHMAKQGQG 435
+P+R LP LN SQ+ A+K ++Q ++LIQGPPGTGKT T ++ +YH Q
Sbjct: 609 IPKRL-QDKLP-LNPSQMIAIKQCMIQDELTLIQGPPGTGKTTTILSLLGIYHSILPPQC 666
Query: 436 QVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSE 495
Q+LVCAPSN AVD++ G++ +R S E + + L ++ ++ +
Sbjct: 667 QILVCAPSNTAVDEI-------GIRFLRDGLVSEEEENERPGAVRLGSRLEVIN----EK 715
Query: 496 LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFR-- 553
LH + S D+ K + + + +SA ++ T G+ LA R
Sbjct: 716 LHPICT--------SRIDDLKRRIM-------MIRSARIVLSTLSGSASTMLAKAGCRPS 760
Query: 554 QVLIDESTQATEPECLIPLVLGAK-QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 612
+++DESTQ+ EP LIPL+ + +V+L+GD QL P + ++R SLFERL
Sbjct: 761 IIIVDESTQSCEPSTLIPLLRNFRSKVILIGDPKQLPPTVFSDISSRFNYDVSLFERLS- 819
Query: 613 LGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFY 671
P+ L QYRMHPS+S+FPS+ FY+ L++G + + +S F P+ FY
Sbjct: 820 -NYLPVHMLDTQYRMHPSISKFPSDQFYQAKLKDGENVVKYSNS---FYNDKKYGPINFY 875
Query: 672 VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRS--GVVPSQIGVITPYEGQRAYIVNYM 729
+E + G S N E V ++ ++ V +G+ITPY+ Q+ + +
Sbjct: 876 HIPDSQEDTTIGKSIKNNLEIKLVYVLLKKLVQEYPEVKKMSVGIITPYKLQKKEL---L 932
Query: 730 SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 789
GA +++ ++ V +VD FQG EKD II SCVR ++ IGFL D RR+NV +TRAR
Sbjct: 933 EAKGAFNEKM--DVVVNTVDGFQGAEKDIIIFSCVR---NKKIGFLRDTRRINVGITRAR 987
Query: 790 YGIVILGNPKVLSKQPLWNGLLTHYKE 816
I ++G +L + P W L K+
Sbjct: 988 RAIYVVGYSSLLEQDPNWGAYLRFIKD 1014
>gi|410077865|ref|XP_003956514.1| hypothetical protein KAFR_0C03880 [Kazachstania africana CBS 2517]
gi|372463098|emb|CCF57379.1| hypothetical protein KAFR_0C03880 [Kazachstania africana CBS 2517]
Length = 675
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 164/555 (29%), Positives = 264/555 (47%), Gaps = 63/555 (11%)
Query: 294 PAWQSVGHVIKLTAQE-EVALELRASQGVPVDINHGFSVDFVWKST---SFDRMQGAMKT 349
P Q G V ++T+Q+ V ++ + Q + +S + K+ ++ RM+ M+
Sbjct: 111 PDSQCTGVVYRITSQQITVTVDEKEEQNATK--LYSYSRLHILKTANTITYKRMESTMRK 168
Query: 350 FAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL---PELNASQVFAVKSVLQRP 406
++ S I LL +PR G P LN SQ A+K +
Sbjct: 169 LQEFDSIPSNKIIQFLLNGAT-------FIPRVSGDTIQFHNPNLNESQRDAIKFSIDNE 221
Query: 407 ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISAT--GLKVVRL 464
IS+I GPPGTGKT T I+ + K+G+ +VLVC PSN+AVD + E+++ G ++R+
Sbjct: 222 ISIIHGPPGTGKTYTIIEIIQQLVKRGE-RVLVCGPSNIAVDTILERLAKVLPGNLLLRI 280
Query: 465 ----------CAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSD- 513
+ S + +S + + + H S + K++ K+ + +
Sbjct: 281 GHPARLLEANLSHSLDILSKNSDAGAIVKDIYHEIDRTISSIRKIKSYKERKEAWNEVKL 340
Query: 514 -EKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR------FRQVLIDESTQATEP 566
K+ + ++ E+ A VI T G+ L N F ++IDE +Q+ EP
Sbjct: 341 LRKELRVKEKKVIDELILGAKVIVSTLHGSSSKELCNIYNSTEKLFDTLIIDEVSQSMEP 400
Query: 567 ECLIPLVL----GAKQVVLVGDHCQLGPVIMCKKAAR--AGLAQSLFERLVLLGLKPIR- 619
+C IPL+ K+++L GD+ QL P + + + + L ++LF+RLV + R
Sbjct: 401 QCWIPLISHYKSNMKRLILAGDNKQLPPTVKTEDDVKIQSKLEKTLFDRLVEIYGDQFRK 460
Query: 620 -LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSS---GIDFPWPVPNRPMFFYVQMG 675
L VQYRM+ ++ F S Y+G L ++ ++ S G+D N P+ +Y G
Sbjct: 461 LLNVQYRMNENIMTFSSVQMYDGKLLADDSVRDKLLSDIPGVDAN-DETNLPLIWYDTQG 519
Query: 676 -------QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNY 728
+EE S S N EA V + S + IG+I+PY Q A +
Sbjct: 520 DDFLESTEEETSTIFQSKFNENEALIAMDHVKKLIESNIPEHAIGIISPYSAQVALLKKT 579
Query: 729 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 788
+S Y IE+++VD FQGREK+ II S VRSNE +GFL D RRLNVA+TR
Sbjct: 580 ISDK-------YPTIEISTVDGFQGREKEVIIFSLVRSNEKFEVGFLKDERRLNVAMTRP 632
Query: 789 RYGIVILGNPKVLSK 803
+ + ++GN + L +
Sbjct: 633 KKQLCVIGNIETLQR 647
>gi|156056478|ref|XP_001594163.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980]
gi|154703375|gb|EDO03114.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 2021
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 245/538 (45%), Gaps = 109/538 (20%)
Query: 390 ELNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAK--------------QGQ 434
+LN Q A+ S +LIQGPPG+GKT T A+V + QGQ
Sbjct: 1321 KLNNGQAKAILSANDNDGFTLIQGPPGSGKTKTIIAMVGALLSQVLQQQAQQVGFRPQGQ 1380
Query: 435 G------------QVLVCAPSNVAVDQLAEKI---------SATGLKVVRLCAKSREAVS 473
++L+CAPSN AVD+L ++ S + V+R+ +A++
Sbjct: 1381 NGGAGAQAQAPKKKLLICAPSNAAVDELVLRLKEGILPLTGSHQKINVIRVGRS--DAIN 1438
Query: 474 SPVEHLTLHYQVR--------------------HLD------------------------ 489
S V+ +TL VR H D
Sbjct: 1439 STVKDVTLDELVRIKLEGDQESKKGQLNDREKLHRDAGLIKERLNVIRPEMEKCRAEGDR 1498
Query: 490 TSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQS---------ADVICCTCV 540
TSE+ + +LK +Q + + ++ ++ + + EIS+ A V+C T
Sbjct: 1499 TSEQKLQREFDELKRKQAHIGNKIDEDKESDNKVRQNEISRRHFTQEIIDGAHVLCATLS 1558
Query: 541 GAGDP--RLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
G+G R N F V+IDE+ Q E LIPL GA + +LVGD QL P ++ + A
Sbjct: 1559 GSGHDFLRNVNVEFETVIIDEAAQCIELSALIPLKYGATKCILVGDPEQLPPTVLSRLAK 1618
Query: 599 RAGLAQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI 657
G QSLF R+ K + L QYRMHP +S+FPS FY L +G + + +
Sbjct: 1619 SYGYEQSLFVRMQRNHPKDVHLLDTQYRMHPEISQFPSQQFYNSRLIDGDGMAQLRVQ-- 1676
Query: 658 DFPWPVPNR--PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQI 712
PW + P F+ +G + G S +N E A + + + T RS +I
Sbjct: 1677 --PWHASSILGPYRFFDVVGVQSKETKGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKI 1734
Query: 713 GVITPYEGQRAYIVNYMSRNGALR--QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ 770
G+IT Y+ Q +N + R + ++++EIE + D+FQGRE++ II SCVR+
Sbjct: 1735 GIITTYKAQ----LNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAG 1790
Query: 771 GIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL 828
GIGFLND RR+NV LTRA+ + +LG+ + L + WN L+ + G + L
Sbjct: 1791 GIGFLNDIRRMNVGLTRAKSSLWVLGDSRALEQGEFWNRLIQDARSRSRYTSGDIMGL 1848
>gi|156842218|ref|XP_001644478.1| hypothetical protein Kpol_520p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115121|gb|EDO16620.1| hypothetical protein Kpol_520p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 2267
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 184/621 (29%), Positives = 280/621 (45%), Gaps = 130/621 (20%)
Query: 315 LRASQGVPVDI------NHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 368
L+ ++G VDI +H FS +S M T + TS+ G ++ L+
Sbjct: 1240 LKNTKGENVDITLRIHRSHKFSKFLTLRSEIHAMKVMQMTTVEREYTSLEGLEFYDLVPE 1299
Query: 369 EVEVQMVRNTLPRRFGAPGLPE---LNASQVFA-VKSVLQRPISLIQGPPGTGKTVTSAA 424
++ + N + E LN SQ A V +V+Q SLIQGPPGTGKT T
Sbjct: 1300 ILKAEASENQANLSDEIEMVKENYKLNTSQAAAIVNTVVQEGFSLIQGPPGTGKTKTILG 1359
Query: 425 IV-YHMAKQG-------------------------QGQVLVCAPSNVAVDQLAEKISATG 458
I+ Y ++K + +VL+CAPSN AVD++ ++
Sbjct: 1360 IIGYFLSKVSSLPSNVIKKPGEAYSVSPSTESLLKKQKVLICAPSNAAVDEIVLRLKGGV 1419
Query: 459 L---------KVVRLCAKSREAVSSPVEHLTL-----------HYQV------------- 485
+ K+VR+ +AV+S ++ +TL +Y +
Sbjct: 1420 IDTEGNLFKPKLVRIGRS--DAVNSAIKDVTLEELVDKRVAEKNYNISSNPDLERKFNSC 1477
Query: 486 ----RHLDTSEKSE------------LHKLQ-----------QLKDEQGELSSSDEKKYK 518
R L SE + KLQ +L E+ E+ + Y+
Sbjct: 1478 VMKRRELRAKLDSENGSVTSTMSTEDISKLQLEIRELSKEINELGKERDEIREQNSITYR 1537
Query: 519 AL---KRATEREISQSADVICCTCVGAGDPRLANF--RFRQVLIDESTQATEPECLIPLV 573
+R + I S+ +IC T G+ LA+ +F V+IDE+ Q TE +IPL
Sbjct: 1538 NRDLDRRNAQARILASSSIICSTLSGSAHDVLASLGVKFDTVIIDEACQCTELSAIIPLR 1597
Query: 574 LGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEF 633
G K+ ++VGD QL P ++ A++ QSLF R + P L VQYRM+P++S F
Sbjct: 1598 YGGKRCIMVGDPNQLPPTVLSGAASKLNYNQSLFVR-IEKNSTPYLLDVQYRMNPAISVF 1656
Query: 634 PSNSFYEGTLQNG---VTINERQSSGIDFPW----PVPNRPMFFYVQMGQEEISASGTSY 686
PS FY G L++G I +R PW P+ FF + G++E + SY
Sbjct: 1657 PSLEFYCGRLKDGPNMEAITKR-------PWHDVAPLSTY-RFFDIVSGRQEQNIKTMSY 1708
Query: 687 LN----RTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRN--GALRQQLY 740
+N R ++ ++ F +IG+I+PY+ Q V M R +
Sbjct: 1709 VNMEEIRVAIELIDYLLKKFENKYDFSGKIGIISPYKEQ----VIKMRREFRNFFGSPIS 1764
Query: 741 KEIEVASVDSFQGREKDYIILSCVR-SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 799
K ++ ++D FQG+EK+ II+SCVR S+ +GFL D RR+NVALTRA+ + ILG+ K
Sbjct: 1765 KYVDFNTIDGFQGQEKEIIIISCVRASDSGTSVGFLKDFRRMNVALTRAKSSMWILGHHK 1824
Query: 800 VLSKQPLWNGLLTHYKEHECL 820
L LWN L++ KE L
Sbjct: 1825 SLQNNKLWNHLISDAKERNML 1845
>gi|297739693|emb|CBI29875.3| unnamed protein product [Vitis vinifera]
Length = 647
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 223/446 (50%), Gaps = 26/446 (5%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ K++ + + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 197 LDRSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRG-AKILACAASNIAVDN 255
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELHKL--QQLKD 504
+ E++ +K+VRL +R + + S ++ L L + E+ L + LK
Sbjct: 256 IVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDIRKEMKALNGKLLKT 315
Query: 505 EQGELSSSDEKKYKALKRATER-------EISQSADVICCTCVGAGDPRLANFRFRQVLI 557
+ K+ K L + + ++ ++A+V+ T GA +L N F V+I
Sbjct: 316 KDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLTGAVSRKLENISFDLVII 375
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLK 616
DE+ QA E C I L+ G++ +L GDH QL P I +A + GL ++LFERL L G +
Sbjct: 376 DEAAQALEIACWIALLKGSR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLYGDE 434
Query: 617 PIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI-DFPWPVPNRPMFFYVQM 674
+ L VQYRMH + + S Y + ++ S + D +
Sbjct: 435 VMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLEDVKKSSSTESTLLLIDT 494
Query: 675 G---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSR 731
EE S +N EA + SGV S IG+ITPY Q ++ M
Sbjct: 495 AGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQ-VVLLKMMKN 553
Query: 732 NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 791
N K++E+++VD FQGREK+ II+S RSN + +GFL+D RR+NVA+TRAR
Sbjct: 554 N----DDKLKDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMNVAVTRARRQ 609
Query: 792 IVILGNPKVLSKQPLWNGLLTHYKEH 817
++ + + ++ L+ +++E+
Sbjct: 610 CCLVCDTETVTSDKFLKRLIEYFEEN 635
>gi|375084259|ref|ZP_09731266.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
gi|374741144|gb|EHR77575.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
Length = 656
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 242/505 (47%), Gaps = 82/505 (16%)
Query: 377 NTLPRRFGAPGLPELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQG 435
++P+ F P LN +Q A+ L LI GP GTGKT T A ++ K+G
Sbjct: 158 KSIPQEF-EPFDKNLNPTQRKAINLALGSEDFFLIHGPFGTGKTRTLAELILQEVKRG-S 215
Query: 436 QVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQV----RHLDTS 491
+VL A SNVAVD L E++ +K+VRL SR VS ++ TL +QV R+
Sbjct: 216 KVLATAESNVAVDNLVERLWGK-VKLVRLGHPSR--VSKHLKESTLAFQVESHERYRRVR 272
Query: 492 E-KSELHKLQQLKDEQGELSSSDEK---KYKALKRATE------------REISQ----- 530
E +++ +L ++D+ + + S + + LK A + +E++Q
Sbjct: 273 ELRNKAERLAMMRDQHKKPTPSLRRGLTNKQILKLAEKGRGARGVPAKDVKEMAQWIVLN 332
Query: 531 -----------------------SADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPE 567
DVI T A + + F +IDE++QAT P
Sbjct: 333 EEVQKLYKFAGKIEEEIIREIIDKTDVILSTNSSAALEFIRDVEFDVAIIDEASQATIPS 392
Query: 568 CLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLKPIRLQVQYRM 626
LIP+ AK+ VL GDH QL P I+ ++A L+++LFE+L+ L K L++QYRM
Sbjct: 393 VLIPIA-KAKRFVLAGDHKQLPPTILSEEAKE--LSETLFEKLIDLYPEKAKMLEIQYRM 449
Query: 627 HPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM---------FFYVQMGQ- 676
+ L EFPS FY G ++ ++ + + P P +V +
Sbjct: 450 NEKLMEFPSREFYNGKIKADESVKNITLADLKVREPFFGEPWDSILKREEPLVFVDTAER 509
Query: 677 ----EEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRN 732
E TS N EA V++IV R GV IG+ITPY+ Q I
Sbjct: 510 RDKWERQRKGSTSRENPLEALLVKEIVEKLFRMGVKEEWIGIITPYDDQVDLI------- 562
Query: 733 GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 792
R + +EIEV +VD +QGREK+ I+LS VRSN+ +GFL D RRLNVALTRA+ +
Sbjct: 563 ---RSLVGEEIEVHTVDGYQGREKEVIVLSFVRSNKEDELGFLTDLRRLNVALTRAKRKL 619
Query: 793 VILGNPKVLSKQPLWNGLLTHYKEH 817
+ +G+ + LS P + L K H
Sbjct: 620 IAIGDSETLSTHPTYKRFLEFVKRH 644
>gi|147866733|emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]
Length = 877
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 251/527 (47%), Gaps = 87/527 (16%)
Query: 328 GFSVDFVWKST---------SFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNT 378
GF+ +F+W T +++R+ A+D S G L + ++++ T
Sbjct: 329 GFAREFIWHHTDESLYNVRFTYNRVNMRRLYQAID--SAKGLEMDLLFPSDSRRRLIKAT 386
Query: 379 --LPRRFGAPGLPELNASQVFAVKSVLQ---RPISLIQGPPGTGKTVTSA-AIVYHMAKQ 432
+P F LN Q+F++K +L P +I GPPGTGKT T AI+ Q
Sbjct: 387 HMVPISFN------LNEEQIFSIKMILGCRGAPPYVIHGPPGTGKTKTLVEAILQLYLTQ 440
Query: 433 GQGQVLVCAPSNVAVDQLAEKISAT------GLKVVRLCAKSREAVSSPVEHLTLHYQVR 486
++LVCAPSN A D L E++ A G ++ RL A SR P E + + +R
Sbjct: 441 KNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRLNATSR-----PYEDMNPDF-IR 494
Query: 487 HLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPR 546
+ + + K L +D K+Y+ + IS G
Sbjct: 495 FCISEDL--IFKCPPL---------NDLKRYRII-------ISTYMSAALLYAEG----- 531
Query: 547 LANFRFRQVLIDESTQATEPECLIPLVLGAKQ---VVLVGDHCQLGPVIMCKKAARAGLA 603
+ F +L+DE+ QA+EPE +IPL ++ VVL GD QLGPVI K A L
Sbjct: 532 VKRSHFSHILLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLG 591
Query: 604 QSLFERLVLLGLK-------PIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSG 656
+S ERL +L YR HP + PS FY+G L + + +SS
Sbjct: 592 KSYLERLFECEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGEL---IPCKDXKSSS 648
Query: 657 IDFPWPVPNR--PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF-LRSGVVPSQIG 713
+ + +PNR P+ F G +E S S+ NRTEA+ V +I+ + + IG
Sbjct: 649 MTWAEILPNRDFPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIG 708
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS------- 766
VITPY Q + AL I+V SV+ FQG+E++ II+S VRS
Sbjct: 709 VITPYRQQ------VLKLKKALEGVDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEF 762
Query: 767 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
+++ +GFL++PRR NVA+TRA+ ++I+GNP ++SK WN +L H
Sbjct: 763 DKNHCLGFLSNPRRFNVAITRAKSLLIIIGNPHIISKDLYWNKILWH 809
>gi|440894224|gb|ELR46730.1| DNA-binding protein SMUBP-2 [Bos grunniens mutus]
Length = 981
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 234/462 (50%), Gaps = 51/462 (11%)
Query: 389 PELNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
P L+ASQ AV L Q+ +++I GPPGTGKT T I+ K+G +VL CAPSNVAV
Sbjct: 187 PALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRG-SKVLCCAPSNVAV 245
Query: 448 DQLAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRHLDTSEKSELH 497
D L E+++ +++RL +R +AV + + + +R D + +
Sbjct: 246 DNLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRR-DIDQAWAKN 304
Query: 498 KLQQLKDEQGELSSSDEKKYKALKRATEREISQS---ADVICCTCVGAGD----PRLANF 550
+ Q K E+ + K LK E + +S A+V+ T GA L +
Sbjct: 305 RKTQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAANVVLATNTGASADGPLKLLPDS 364
Query: 551 RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 610
F V+IDE QA E C IPL L A++ +L GDH QL P I+ KAA AGL+ SL ERL
Sbjct: 365 HFDMVVIDECAQALEASCWIPL-LKARKCILAGDHKQLPPTIVSHKAALAGLSLSLMERL 423
Query: 611 VLL-GLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQN-------------GVTINERQSS 655
G +R L VQYRMH +++ + S + Y G L GV E +
Sbjct: 424 AERHGAGALRMLTVQYRMHQAIARWASEALYHGQLTAHPSVAGHLLRDLPGVAATE--ET 481
Query: 656 GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVI 715
G+ P + + +++ +++ + G N E V V + +GV + I VI
Sbjct: 482 GV--PLLLVDTAGCGLLELEEDDEQSKG----NPGEVRLVSLHVQALVDAGVRAADIAVI 535
Query: 716 TPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
TPY Q V+ + ++ A R E+E+ SVD FQGREK+ +ILS VRSN +GFL
Sbjct: 536 TPYNLQ----VDLLRQSLAHR---LPELEIRSVDGFQGREKEAVILSFVRSNRKGEVGFL 588
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
+ RR+NVA+TRAR + ++ + + +S L+ + EH
Sbjct: 589 AEDRRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVGYLTEH 630
>gi|348565147|ref|XP_003468365.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cavia porcellus]
Length = 988
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 159/464 (34%), Positives = 238/464 (51%), Gaps = 59/464 (12%)
Query: 391 LNASQVFAVKSVL-QRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ASQ AV L Q+ +++I GPPGTGKT T ++ KQG +VL CAPSNVAVD
Sbjct: 192 LDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEVILQAVKQGL-KVLCCAPSNVAVDN 250
Query: 450 LAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE-----KSEL------HK 498
L E+++ L+++RL +R + P++ +L + D+++ + ++ +K
Sbjct: 251 LVERLALRKLRILRLGHPAR--LLEPIQQHSLDAVLARSDSAQIVADIRKDIDQIFVKNK 308
Query: 499 LQQLKDEQGELSSSDEKKYKALKRATEREISQS---ADVICCTCVGAGD----PRLANFR 551
Q K ++ S ++ K LK E + +S A V+ T GA L
Sbjct: 309 KTQEKKDKSNFRSEIKQLRKELKEREEAAMVESLTAASVVLATNTGASPDGPLKLLPESY 368
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F V+IDE QA E C IPL L A++ +L GDH QL P + +AA+ GL+ SL ERL
Sbjct: 369 FDVVVIDECGQALEASCWIPL-LKARKCILAGDHKQLPPTTVSHQAAQEGLSLSLMERLA 427
Query: 612 LL-GLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQN-------------GVTINERQSSG 656
G K +R L VQYRMH ++ + S + Y G L GVT E +G
Sbjct: 428 EEHGDKVVRTLTVQYRMHQAIMHWASEAMYGGQLTAHSSVAGQLLRDLPGVTATE--ETG 485
Query: 657 IDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
I P + + ++ +E+ + G N E V + + +GV S I VIT
Sbjct: 486 I--PLLLVDTASCGLFELEEEDDQSKG----NPGEVRLVSLHIQALVDAGVQASDIAVIT 539
Query: 717 PYEGQRAYIVNYMSRNGALRQQL---YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 773
PY Q V+ LRQ L + E+E+ SVD FQGREK+ ++LS VRSN +G
Sbjct: 540 PYNLQ----VDL------LRQSLEHKHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVG 589
Query: 774 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 817
FL + RR+NVA+TRAR + ++ + + ++ P L+ + +H
Sbjct: 590 FLAEDRRINVAVTRARRHVALVCDSRTVNNHPFLKTLVDYVTQH 633
>gi|74711848|sp|Q6ZU11.1|YD002_HUMAN RecName: Full=Uncharacterized protein FLJ44066
gi|34532402|dbj|BAC86416.1| unnamed protein product [Homo sapiens]
Length = 926
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 225/423 (53%), Gaps = 30/423 (7%)
Query: 406 PISLIQGPPGTGKTVTSAAIVYHMAKQGQG------------QVLVCAPSNVAVDQLAEK 453
PI++I G G GK+ A ++ + + ++L+ + +NVAVD++
Sbjct: 470 PITIIHGVFGAGKSYLLAVVILFFVQLFEKSEAPTIGNARPWKLLISSSTNVAVDRVLLG 529
Query: 454 ISATGLK-VVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSS 512
+ + G + +R+ S ++ P+ +LH + ++ + ELH L + +D
Sbjct: 530 LLSLGFENFIRV--GSVRKIAKPILPYSLHAGSEN-ESEQLKELHALMK-EDLTPTERVY 585
Query: 513 DEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPL 572
K + K T R + + V+ TC P + + +F V++DE +Q TEP L+P+
Sbjct: 586 VRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPASLLPI 645
Query: 573 V-LGAKQVVLVGDHCQLGPVIMCKKAARA-GLAQSLFERLVLLGLKPIRLQVQYRMHPSL 630
++++LVGD QL P I AA GL Q+LF+RL L+G KPI L+ QYR HP++
Sbjct: 646 ARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRCHPAI 705
Query: 631 SEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRT 690
S ++ FY+G L NGVT ER W +P + FY G E+I S+ N
Sbjct: 706 SAIANDLFYKGALMNGVTEIERSPL---LEW-LPT--LCFYNVKGLEQIERDN-SFHNVA 758
Query: 691 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 750
EA K++ + + SG+ S IGVIT Y+ Q + + +S + K ++V++VD+
Sbjct: 759 EATFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSAVDFHHPDI-KTVQVSTVDA 817
Query: 751 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGL 810
FQG EK+ IILSCVR+ + +GF++ +R+NVALTR + ++I+GN L K LW +
Sbjct: 818 FQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGKRHLLIVGNLACLRKNQLWGRV 874
Query: 811 LTH 813
+ H
Sbjct: 875 IQH 877
>gi|255081534|ref|XP_002507989.1| predicted protein [Micromonas sp. RCC299]
gi|226523265|gb|ACO69247.1| predicted protein [Micromonas sp. RCC299]
Length = 1002
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 212/410 (51%), Gaps = 44/410 (10%)
Query: 436 QVLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSSPVEHLTLHYQV 485
+VLVCAPSN A+D++ +I +GL +VR+ V VE +++ V
Sbjct: 415 KVLVCAPSNSALDEIVLRIMQSGLLGPNGSPYSPTLVRVGVN----VHHSVESVSMEALV 470
Query: 486 RHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATERE-----ISQSADVICCTCV 540
R ++ ++ D+ +++ K +RA E++ I A V+C T
Sbjct: 471 RE----------RVGEVGDKVAAAAAAAASSEKKFERALEKDRVKLAILDEAAVVCSTLS 520
Query: 541 GAGDPRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAA 598
+G A +F V+IDE+ QA EP L+PL GAKQV LVGD QL ++ A
Sbjct: 521 FSGSGMFARMTRQFDVVVIDEAAQAVEPSTLVPLCYGAKQVFLVGDPRQLPATVLSSIAT 580
Query: 599 RAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGID 658
QSLF+R G L+ QYRMHP++ EFPS FY G L++G + ++
Sbjct: 581 DHNYDQSLFKRFEQCGYPIHLLKTQYRMHPAIREFPSTQFYSGELEDG----PKMAAKTK 636
Query: 659 FPW--PVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPS---QIG 713
PW + RP F ++ + +E G S+ N EA +V T +++ + +IG
Sbjct: 637 RPWHDNMLFRP-FVFIDVAGKEYQGGGMSWANDDEATLAVALVATLVKNYAELASGEKIG 695
Query: 714 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS-NEHQGI 772
VI+PY+ Q I ++ L ++ ++++V S+D FQGREKD I S VR+ + +G+
Sbjct: 696 VISPYKAQVKNIRRRLAET--LGEERARKVDVNSIDGFQGREKDVCIFSVVRAPAKGRGL 753
Query: 773 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVE 822
GF+ D RR+NV LTR++ +++LG+ K L W GL+ ++ +V+
Sbjct: 754 GFVADERRINVGLTRSKSSLIVLGSAKALKGDDNWGGLVASARDRNLIVK 803
>gi|367007328|ref|XP_003688394.1| hypothetical protein TPHA_0N01790 [Tetrapisispora phaffii CBS 4417]
gi|357526702|emb|CCE65960.1| hypothetical protein TPHA_0N01790 [Tetrapisispora phaffii CBS 4417]
Length = 677
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 168/566 (29%), Positives = 270/566 (47%), Gaps = 88/566 (15%)
Query: 295 AWQSVGHVIKLTAQ----------EEVALELRASQGVPVDINHGFSVDFVWKST---SFD 341
A + VG V K+T Q EE A++L + F ++ K+ ++
Sbjct: 115 ALEIVGTVYKITDQLCSITIEEKDEEDAMKL-----------YSFPKLYIIKTVNTVTYK 163
Query: 342 RMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKS 401
RM+ ++ E + + I +LL Q ++ T P+ LN SQ A+
Sbjct: 164 RMESTLRKLGEFEGTPNNNIIQYLLQDR---QFIKQT-PKSDIEFNNKALNKSQKDAIAF 219
Query: 402 VLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISAT--GL 459
+ IS+I GPPGTGKT T ++ + +G+ +VLVC PSN+AVD + E++ G
Sbjct: 220 AMANDISIIHGPPGTGKTYTLIELIQQLVAKGE-RVLVCGPSNIAVDTILERLDKVLPGN 278
Query: 460 KVVRLCAKSREAVSSPVEHLTLHYQ-------VRHLDTSEKSELHKLQQLKDEQGELSSS 512
++R+ +R ++ L + + V+ +D + ++++K+ +
Sbjct: 279 VLLRIGHPARLLEANLAHSLDILSRSGNAGEIVKDIDKDIDKTISDIKKMKNYK------ 332
Query: 513 DEKKYKALKRATEREI-SQSADVIC----------CTCVGAGDPRLANFR------FRQV 555
D K+ + L + RE+ ++ VIC T GAG L + F +
Sbjct: 333 DRKEARKLVKDLRRELRTREKKVICDMILEARVVVATLHGAGSRELCSVYDQVPKLFNTL 392
Query: 556 LIDESTQATEPECLIPLVL----GAKQVVLVGDHCQLGPVIMCKKAARAG--LAQSLFER 609
+IDE +Q+ E +C IPL+ ++VL GD+ QL P I + + L+ +LF+R
Sbjct: 393 IIDEVSQSLEQQCWIPLISHYRSDISRLVLAGDNKQLPPTIKTEDNKKIADQLSTTLFDR 452
Query: 610 LVLLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPN-- 665
LV + + L VQYRM+ S+ EFPS Y G L ++ + S D P N
Sbjct: 453 LVKVYGDQFKTLLNVQYRMNESIMEFPSTEMYNGQLIADSSVKTQILS--DLPGVDANDE 510
Query: 666 --RPMFFYVQMGQEEISASG------TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITP 717
P+ +Y G + + + S N EA V+ + L S V S IGVI+P
Sbjct: 511 TLEPLIWYDTQGDDFLERADDDNEIIASKYNENEAYLVKSHILKLLESNVPQSAIGVISP 570
Query: 718 YEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLND 777
Y Q ++I L + Y IE+++VD FQGREK+ IILS VRSN+ +GFL D
Sbjct: 571 YRAQISFI-------KKLIRAEYPGIEISTVDGFQGREKEVIILSLVRSNDDYKVGFLKD 623
Query: 778 PRRLNVALTRARYGIVILGNPKVLSK 803
RRLNVA+TR++ + ++GN + L +
Sbjct: 624 SRRLNVAITRSKKQLCVIGNMETLER 649
>gi|281203712|gb|EFA77908.1| AN1-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 988
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 159/517 (30%), Positives = 252/517 (48%), Gaps = 51/517 (9%)
Query: 329 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGL 388
F++D + ++ +M+ A++ + ++ ++ + Q +T+ + +
Sbjct: 152 FAIDKLANDITYRKMRDAIERLKTTNSPITDILFSN--------QEPTHTIKKVKISAVS 203
Query: 389 PELNASQVFAVKSVLQ-RPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 447
+LN Q+ A++ L I+LI GPPGTGKT T + + K G G+VL C PSN++V
Sbjct: 204 KKLNQPQIEAIEFALSSNEIALIHGPPGTGKTTTVVEFIVQVCKGG-GRVLACGPSNLSV 262
Query: 448 DQLAEKISATGLKV--VRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELHKL-QQ 501
D + E++ V R+ +R ++H T + Q + K E+ L +Q
Sbjct: 263 DNILERLLEFKDIVNPTRIGHPARILSGLTKHTLDHKTKNGQDAQILKEIKIEIATLMKQ 322
Query: 502 LKD---EQGELSSSDEKKYKALKRATEREIS------QSADVICCTCVGAGDPRLANFR- 551
LKD E+G S K RE S ++++VI T GA D L+
Sbjct: 323 LKDGQVEKGARRSVYNTIRDLRKDLKNREFSLVDQVIRNSNVILSTNTGAADYVLSRCEP 382
Query: 552 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 611
F V+IDE+ QA E C IP+ G K+++L GDH QL P I ++A GL ++FERL+
Sbjct: 383 FDWVIIDEAAQALEASCWIPISRG-KKLLLAGDHQQLPPTIHSEQAKSDGLETTMFERLI 441
Query: 612 LLGLKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNR--- 666
L + I L VQYRM+ + + S+ FY G + ++ ++ + NR
Sbjct: 442 QLYQENISRLLSVQYRMNQEIMRWSSDEFYHGRMLADNSV----ANHLLLERSTKNRVAT 497
Query: 667 ----PMFFYVQMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 719
P+ G +E S N EA V K + LR GV S IGVITPY
Sbjct: 498 TTTCPLMLIDTSGLDMEESADDESQSKFNVGEADIVVKYIEKLLRYGVEQSSIGVITPYN 557
Query: 720 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEH-QGIGFLNDP 778
GQ + +S + +IE+ +VD FQGREK+ +I+S VRSN +GFL +
Sbjct: 558 GQVKQLKMVLSNR-------FSDIEIGTVDGFQGREKEVVIISTVRSNAAPHNVGFLAEE 610
Query: 779 RRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYK 815
RR+NVA+TRA+ + ++ + LS P ++ ++K
Sbjct: 611 RRMNVAITRAKRQVTLVSDTDTLSSNPFLARMVEYFK 647
>gi|154280609|ref|XP_001541117.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411296|gb|EDN06684.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 2150
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 256/535 (47%), Gaps = 104/535 (19%)
Query: 390 ELNASQVFAVKSVLQR-PISLIQGPPGTGKTVTSAAIV----------YHMAKQGQ---- 434
++N +Q AV+S + +LIQGPPG+GKT T A+V + + G
Sbjct: 1292 KVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRPGSSGDF 1351
Query: 435 ---------GQVLVCAPSNVAVDQLAEK-----ISATGLK----VVRLCAKSREAVSSPV 476
G++LVCAPSN AVD+L + I+++G K VVRL +A++S V
Sbjct: 1352 RPVTRATTCGKLLVCAPSNAAVDELVMRFKEGVITSSGQKQNISVVRLGRS--DAINSNV 1409
Query: 477 EHLTLHYQV--------------RHLDT---------SEKSEL-HKLQQLKDEQGELSSS 512
+TL V + L T ++ +E+ +L Q + + + S
Sbjct: 1410 MDVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQFNEIRERLDQCRAKGQHVPSE 1469
Query: 513 DEKKYKALKRA----------------------------TEREISQSADVICCTCVGAGD 544
E+++ LKR ++EI + VIC T G+G
Sbjct: 1470 LEREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIINGSHVICATLSGSGH 1529
Query: 545 PRLANF--RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGL 602
+ F V+IDE+ Q+ E LIPL G + +LVGD QL P ++ K A+R
Sbjct: 1530 EMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQY 1589
Query: 603 AQSLFERLVLLGLKPIRL-QVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPW 661
QSLF R+ K + L QYRMHP +S FPS +FY+G L++G + + + PW
Sbjct: 1590 EQSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLKDGPDMAKLRVR----PW 1645
Query: 662 PVPNR--PMFFYVQMGQEEISASGTSYLNRTE---AANVEKIVTTFLRSGVVPSQIGVIT 716
P F+ G + S +N E A + + +T + +IG+IT
Sbjct: 1646 HSSELLGPYRFFDVQGLHSSAPKSHSLVNLAELRVAMKLYERLTIDYLTYDFKGKIGIIT 1705
Query: 717 PYEGQRAYIVN-YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFL 775
PY+GQ + N + ++ G+ ++ +E + D+FQGRE + II SCVR++ ++GIGFL
Sbjct: 1706 PYKGQLREMKNQFANKYGS---SIFTTVEFNTTDAFQGRECEVIIFSCVRAS-NRGIGFL 1761
Query: 776 NDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQ 830
D RR+NV LTRA+ + +LGN + L + WNGL+T + +G + L Q
Sbjct: 1762 ADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQGDILKLLQ 1816
>gi|405955090|gb|EKC22334.1| DNA-binding protein SMUBP-2 [Crassostrea gigas]
Length = 997
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 231/457 (50%), Gaps = 61/457 (13%)
Query: 391 LNASQVFAVKSVLQRP-ISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ AV+ L +P ++++ GPPGTGKT T I+ KQG ++L CAPSN+AVD
Sbjct: 188 LDESQEDAVRFALAQPEVAIVHGPPGTGKTTTVIEIIIQAIKQG-NKILACAPSNIAVDN 246
Query: 450 LAEKISATGLKVVRLCAKSR----------EAVSSPVEHLTLHYQVRH-LDTSEKSELHK 498
L E+++ KVVRL +R +A+ S E L VR LD + L
Sbjct: 247 LVERLAQHKQKVVRLGHPARVLPHIQKYSLDAILSSSEETRLVEDVRKDLDKN----LSA 302
Query: 499 LQQLKDEQGELSSSDEKKY--KALKR---ATEREISQSADVICCTCVGAGDPR-----LA 548
+++ +D + ++ KY K L++ A +E+ + ADV+ T + + DPR L
Sbjct: 303 IRKTRDHGEKQKIREDVKYLRKELRQREEAASKEVLKRADVVLAT-LSSADPRGPIRYLD 361
Query: 549 NFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 608
N F V+IDE +QA E C IPL L A + VL GDH QL P I+ K+AA AGL +L E
Sbjct: 362 NEHFDLVVIDECSQAVEAACWIPL-LRAPRCVLAGDHLQLPPTILSKEAASAGLETTLME 420
Query: 609 RLV-LLGLKPIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVP-- 664
RL+ L G K +R L QYRMH + ++ S+ YEG L ++ I+
Sbjct: 421 RLLDLYGGKVMRMLTTQYRMHQLIMQWSSDQLYEGKLTAHSSVATHLLRDIEKVEETEET 480
Query: 665 NRPMFFYVQMG--------QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVIT 716
+ P+ G EEIS N EA V V ++ G+ +I V
Sbjct: 481 SEPLLLIDTAGCQLYELDVPEEISKG-----NEGEADIVSSHVEKLIKLGLNQEEIAV-- 533
Query: 717 PYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLN 776
E R + N Y ++E+ SVD FQGREK+ +I+S VRSN +GFL
Sbjct: 534 --ELLRLRLSND-----------YPKVEIKSVDGFQGREKEAVIISMVRSNMKGEVGFLA 580
Query: 777 DPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 813
+ RR+NVA+TRAR + ++ + + + L+ +
Sbjct: 581 EKRRINVAITRARRHLAVVCDSETVGHDAFLKSLVDY 617
>gi|281343230|gb|EFB18814.1| hypothetical protein PANDA_015268 [Ailuropoda melanoleuca]
Length = 2670
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 234/495 (47%), Gaps = 77/495 (15%)
Query: 391 LNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ-------------- 436
LN+SQ AV++ L++ ++IQGPPGTGKTV IV+ K + Q
Sbjct: 2176 LNSSQNRAVRAALRKRFTVIQGPPGTGKTVVGFHIVFWFHKSNEEQAMAWGAPGEKPVGA 2235
Query: 437 --VLVCAPSNVAVDQLAEKISA--TGLKVVRLCAKSREAVSSPV---------------- 476
+L C PSN +VD LA + + LK +R+ ++ EA PV
Sbjct: 2236 PCILYCGPSNKSVDVLAGLLLSRRAELKPLRVYSEQAEATEFPVPGVGSSGLPKKTPREG 2295
Query: 477 ------EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDE-KKYK-ALKRATEREI 528
+TLH+++R ++ + + ++GE+ S D+ +YK L +A + E+
Sbjct: 2296 RPNQTLRSITLHHRIRQPSNPYAPDIREFDA-RLQKGEVFSKDDLTRYKLVLGKARKFEL 2354
Query: 529 SQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVL--GAKQVVLVGDHC 586
Q VI CTC A L RQ+L+DE+ ATEPE LIPLV A++VVL+GDH
Sbjct: 2355 EQHG-VILCTCSCAASRSLKKLAVRQILVDEAGMATEPETLIPLVTFSQAEKVVLLGDHK 2413
Query: 587 QLGPVIMCKKAARAGLAQSLFERLVLLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNG 646
QL PV+ ++ GL +SLFER L L QYRMH + FPS FYE L+
Sbjct: 2414 QLRPVVKNEQLQNLGLDRSLFER---YHLDAHLLDTQYRMHEGICAFPSTEFYEKRLKTW 2470
Query: 647 VTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF---- 702
+ R S + +F YVQ G E+ T N AN E++
Sbjct: 2471 RGLR-RPPSILGHVGKESCSVIFGYVQ-GHEQSLLVSTDEGNENSKANPEEVAEVVRIAK 2528
Query: 703 ---LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYI 759
L V P + ++TPY Q A I + R G + V S+ QG E Y+
Sbjct: 2529 QLTLGRTVDPKDVAILTPYNAQAAEISKTLGREGV------TGVTVCSITKSQGSEWRYV 2582
Query: 760 ILSCVR-------------SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL 806
++S VR S + +GF+ DP ++NVA+TRA+ G+ ++G+ ++L PL
Sbjct: 2583 LVSTVRTCPESDLDQRPTKSWLKKFLGFVVDPNQVNVAITRAKEGLCLIGDHRLLRCCPL 2642
Query: 807 WNGLLTHYKEHECLV 821
W L ++ LV
Sbjct: 2643 WRRFLDFCEDQRTLV 2657
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 205/499 (41%), Gaps = 81/499 (16%)
Query: 379 LPRRFGAPGLPELNASQVFAVKSVL------QRPIS--LIQGPPGTGKTVTSAAIVYHMA 430
+PR P + N Q AV + RPI+ LI GP GTGKT T A +
Sbjct: 503 VPRPLPTPPTMQGNHKQKLAVAFIAGRSPGGTRPIAPLLIYGPFGTGKTYTLAMASLEVI 562
Query: 431 KQGQGQVLVCAPSNVAVDQLAEK-----ISATGLKVVRLCAKSREAVSSPVEHLTLHYQV 485
+Q +VL+C +N A D E+ +S+ + L + S + TL Y
Sbjct: 563 RQPHTRVLICTHTNSAADIYIEEHFHRYVSSGHPEATPLRVMYTDRPPSQTDAATLQYC- 621
Query: 486 RHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDP 545
L + D + ++ RA E+ Q ++ T A +
Sbjct: 622 -----------------------LLTGDRRAFRPPTRA---ELEQH-RIVVTTTSQAREL 654
Query: 546 RLANFRFRQVLIDESTQATEPECLIPLVLGA--KQVVLVGDHCQLGPVIMCKKAARAGLA 603
R+ F +LIDE+ Q E E L PL + +VVL GDH Q+ P + A+A A
Sbjct: 655 RVPAGFFSHILIDEAAQMLECEALTPLRYASPSTRVVLAGDHMQVTPKLFSVARAQAA-A 713
Query: 604 QSLFERLV---------LLGLKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS 654
+L RL + + YR ++ F S FY + G I+ +
Sbjct: 714 HTLLYRLFQHYQQEAHEVARHSRVVFHENYRSTEAILSFVSRHFY---VAKGSPIH---A 767
Query: 655 SGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGV 714
SG + P + P+ F G E S TS+LN E V + V +S P G
Sbjct: 768 SG-EVPRHPKHYPLMFCHVAGSPERDMSRTSWLNAAEIVQVAEKVQEIYQSWP-PCWGG- 824
Query: 715 ITPYEGQRAYIVNYMSRNGALRQQLYK----EIEVASVDSFQGREKDYIILSCVRSNEHQ 770
E + V++ ++ ALRQ+L + ++ V S + GRE ++LS V +++
Sbjct: 825 ---REQRSICAVSHGAQVSALRQELRRRDLGQVSVGSFEILPGREFRVVVLSTVHNHDSL 881
Query: 771 ------GIGFLNDPRRLNVALTRARYGIVILGNPKVLSK----QPLWNGLLTHYKEHECL 820
+GF D R LN +TRA+ +V +G+ L LW + H +
Sbjct: 882 LSSGAPALGFFTDARVLNTVMTRAQSQVVAVGDAVALCSFGACSKLWKSFIRECVRHHSI 941
Query: 821 VEGPLN--NLKQSMVQFQK 837
L+ +++QS+V+ Q+
Sbjct: 942 SPKTLSLEHIEQSVVRRQR 960
>gi|225441756|ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera]
Length = 647
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 223/446 (50%), Gaps = 26/446 (5%)
Query: 391 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 449
L+ SQ A+ K++ + + L+ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 197 LDRSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRG-AKILACAASNIAVDN 255
Query: 450 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELHKL--QQLKD 504
+ E++ +K+VRL +R + + S ++ L L + E+ L + LK
Sbjct: 256 IVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDIRKEMKALNGKLLKT 315
Query: 505 EQGELSSSDEKKYKALKRATER-------EISQSADVICCTCVGAGDPRLANFRFRQVLI 557
+ K+ K L + + ++ ++A+V+ T GA +L N F V+I
Sbjct: 316 KDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLTGAVSRKLENISFDLVII 375
Query: 558 DESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV-LLGLK 616
DE+ QA E C I L+ G++ +L GDH QL P I +A + GL ++LFERL L G +
Sbjct: 376 DEAAQALEIACWIALLKGSR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLYGDE 434
Query: 617 PIR-LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGI-DFPWPVPNRPMFFYVQM 674
+ L VQYRMH + + S Y + ++ S + D +
Sbjct: 435 VMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLEDVKKSSSTESTLLLIDT 494
Query: 675 G---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSR 731
EE S +N EA + SGV S IG+ITPY Q ++ M
Sbjct: 495 AGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQ-VVLLKMMKN 553
Query: 732 NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 791
N K++E+++VD FQGREK+ II+S RSN + +GFL+D RR+NVA+TRAR
Sbjct: 554 N----DDKLKDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMNVAVTRARRQ 609
Query: 792 IVILGNPKVLSKQPLWNGLLTHYKEH 817
++ + + ++ L+ +++E+
Sbjct: 610 CCLVCDTETVTSDKFLKRLIEYFEEN 635
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,823,958,212
Number of Sequences: 23463169
Number of extensions: 834992941
Number of successful extensions: 3458858
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4210
Number of HSP's successfully gapped in prelim test: 8781
Number of HSP's that attempted gapping in prelim test: 3361369
Number of HSP's gapped (non-prelim): 73754
length of query: 1066
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 913
effective length of database: 8,769,330,510
effective search space: 8006398755630
effective search space used: 8006398755630
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)