Your job contains 1 sequence.
>001503
MADNRNGNAQMANGTGGANAYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPA
SEDLRYLKSSALNIWLLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADV
VIHVKAKTDDGVELMDAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSG
FQLSDVTNGLSELFAVKDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLM
DEAEKAILEPTKAGVKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICA
VGSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVE
REAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNKPK
NQMFSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNEDEEEEERPKVKAEANGTEALP
SKTTLRSDNQEISKEELRRQHQAELARQKNEETGRRLAGGGSGAGDNRASAKTTTDLIAY
KNVNDLLPPRDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNV
PGTPFNPHDTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERAT
LVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIM
FGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYD
PDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKA
SAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRIDS
IPSSSLDSIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEFLNLEASDSE
SENSEESDQGYEPSDMEVDSVTEDEDSDSESLVESEDEEEEDSEEDSEEEKGKTWAELER
EATNADREKGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRTKLR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001503
(1065 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132756 - symbol:SPT16 "global transcription f... 3762 0. 1
ZFIN|ZDB-GENE-031118-96 - symbol:supt16h "suppressor of T... 1275 5.2e-165 3
RGD|1310032 - symbol:Supt16h "suppressor of Ty 16 homolog... 1513 6.6e-162 2
MGI|MGI:1890948 - symbol:Supt16 "suppressor of Ty 16" spe... 1510 1.4e-161 2
UNIPROTKB|E1BNP8 - symbol:SUPT16H "Uncharacterized protei... 1507 2.9e-161 2
UNIPROTKB|E2REU7 - symbol:SUPT16H "Uncharacterized protei... 1505 4.6e-161 2
UNIPROTKB|Q9Y5B9 - symbol:SUPT16H "FACT complex subunit S... 1505 4.6e-161 2
UNIPROTKB|F1S8K5 - symbol:SUPT16H "Uncharacterized protei... 1501 1.2e-160 2
DICTYBASE|DDB_G0282677 - symbol:spt16 "FACT complex subun... 1514 2.3e-159 2
POMBASE|SPBP8B7.19 - symbol:spt16 "FACT complex subunit S... 1464 2.4e-153 2
UNIPROTKB|Q9W603 - symbol:supt16h "FACT complex subunit S... 1429 9.3e-152 2
FB|FBgn0002183 - symbol:dre4 "dre4" species:7227 "Drosoph... 1471 9.8e-151 1
ASPGD|ASPL0000031805 - symbol:AN5102 species:162425 "Emer... 1369 6.0e-146 2
WB|WBGene00018849 - symbol:F55A3.3 species:6239 "Caenorha... 1355 1.9e-138 1
CGD|CAL0005222 - symbol:CDC68 species:5476 "Candida albic... 797 1.3e-131 3
UNIPROTKB|Q5A1D5 - symbol:SPT16 "FACT complex subunit SPT... 797 1.3e-131 3
TAIR|locus:2139217 - symbol:GTC2 species:3702 "Arabidopsi... 1243 1.4e-126 1
SGD|S000003175 - symbol:SPT16 "Subunit of the heterodimer... 1107 6.1e-114 2
WB|WBGene00018852 - symbol:F55A3.7 species:6239 "Caenorha... 238 1.5e-33 2
UNIPROTKB|Q3ACM8 - symbol:CHY_1272 "Putative proline dipe... 158 4.6e-08 1
TIGR_CMR|CHY_1272 - symbol:CHY_1272 "putative proline dip... 158 4.6e-08 1
UNIPROTKB|Q3AAZ1 - symbol:pepP "Aminopeptidase P" species... 142 2.5e-06 1
TIGR_CMR|CHY_1873 - symbol:CHY_1873 "aminopeptidase P" sp... 142 2.5e-06 1
DICTYBASE|DDB_G0282075 - symbol:xpnpep3 "peptidase M24 fa... 136 1.6e-05 2
RGD|1589063 - symbol:Xpnpep3 "X-prolyl aminopeptidase (am... 128 0.00016 1
UNIPROTKB|G3V9W4 - symbol:Xpnpep3 "Probable Xaa-Pro amino... 128 0.00016 1
MGI|MGI:2445217 - symbol:Xpnpep3 "X-prolyl aminopeptidase... 124 0.00043 1
TIGR_CMR|GSU_2021 - symbol:GSU_2021 "xaa-pro dipeptidase"... 121 0.00051 1
TIGR_CMR|DET_0715 - symbol:DET_0715 "metallopeptidase, M2... 119 0.00088 1
>TAIR|locus:2132756 [details] [associations]
symbol:SPT16 "global transcription factor C" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0009987 "cellular process" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005719 "nuclear euchromatin"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IDA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0007346
"regulation of mitotic cell cycle" evidence=RCA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR000994
Pfam:PF00557 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0010228 GO:GO:0005719 Gene3D:3.90.230.10 SUPFAM:SSF55920
EMBL:AF080119 EMBL:AL161518 GO:GO:0035101 InterPro:IPR013719
Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 EMBL:AB493678 IPI:IPI00520940
PIR:T01906 RefSeq:NP_192809.1 UniGene:At.27606
ProteinModelPortal:O82491 SMR:O82491 STRING:O82491 PaxDb:O82491
PRIDE:O82491 EnsemblPlants:AT4G10710.1 GeneID:826665
KEGG:ath:AT4G10710 TAIR:At4g10710 InParanoid:O82491
PhylomeDB:O82491 ProtClustDB:CLSN2686053 Genevestigator:O82491
GermOnline:AT4G10710 Uniprot:O82491
Length = 1074
Score = 3762 (1329.3 bits), Expect = 0., P = 0.
Identities = 731/1061 (68%), Positives = 833/1061 (78%)
Query: 1 MADNRNGNAQMA-NGTG--GANAYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIAT 57
MAD+RNGNA+ +G N YSI+++NF +R +ALY HW KH +D WGSAD LAIAT
Sbjct: 1 MADSRNGNARAPPSGVPPKAGNTYSIDVKNFISRARALYEHWKKHSADLWGSADALAIAT 60
Query: 58 PPASEDLRYLKSSALNIWLLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVG 117
PPAS+DLRYLKSSALNIWLLGYEFP+T+MVF KKQI FLCS+ KASLL +VK+ A D +
Sbjct: 61 PPASDDLRYLKSSALNIWLLGYEFPDTIMVFTKKQIHFLCSRNKASLLEVVKKPAHDELK 120
Query: 118 ADVVIHVKAKTDDGVELMDAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQ 177
DV++HVK K DDG LMDAIF A+R S D D +VG IARE PEG+LLETW +RL+
Sbjct: 121 LDVIMHVKPKGDDGTGLMDAIFRAIRDLSRGDGNDSQVVGHIAREAPEGKLLETWTERLK 180
Query: 178 NSGFQLSDVTNGLSELFAVKDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHS 237
N+ FQ D+T GLS+LFAVKD E+M+VKKA YL Y+VM +VVP LE+ IDEEK VTHS
Sbjct: 181 NANFQFVDITGGLSDLFAVKDDTEVMSVKKAAYLAYSVMKNVVVPNLESAIDEEKDVTHS 240
Query: 238 LLMDEAEKAILEPTKAGVKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVI 297
LMD EKAILEPTKA VKL+ ENVDICYPPIFQSGG FDL+PSAASNDELL YD S+I
Sbjct: 241 ALMDLTEKAILEPTKASVKLKPENVDICYPPIFQSGGKFDLKPSAASNDELLTYDPASII 300
Query: 298 ICAVGSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALS 357
ICAVG+RYNSYCSN+AR++LIDAT LQSK YEVLLKAHEAAI AL+ G K++ YQAALS
Sbjct: 301 ICAVGARYNSYCSNVARTYLIDATSLQSKAYEVLLKAHEAAIDALRSGRKINTVYQAALS 360
Query: 358 VVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQT- 416
VVE+ APE V LTKSAGTGIGLEFRESGLN+NAKND+V++ KM FNVS+GFQNL+ ++
Sbjct: 361 VVEKNAPEFVDKLTKSAGTGIGLEFRESGLNINAKNDKVLRPKMAFNVSLGFQNLECESE 420
Query: 417 NKPKNQMFSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANGT 476
++ KN+ FSLLLADTV+V + PE++T K SK+VKDVAYSF +P+ KA +G+
Sbjct: 421 SRSKNKKFSLLLADTVLVTDQKPELLT-KCSKSVKDVAYSFKEDEEEE-KPRKKARTSGS 478
Query: 477 EALPSKTTLRSDNQEISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTD 536
E +KT LRSD+ +SKEELR+QHQAELARQKNEET KT+ D
Sbjct: 479 ENYITKTALRSDDHVVSKEELRKQHQAELARQKNEETARRLAGDSSGAGDSRSTAKTSAD 538
Query: 537 LIAYKNVNDLLPPRDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRI 596
++AYKNVND+ P ++LMIQ+D +NEAVL PIYGS+VPFHVATIRTVS QDTNRNCYIRI
Sbjct: 539 VVAYKNVNDM-PHKELMIQVDTRNEAVLLPIYGSLVPFHVATIRTVSGNQDTNRNCYIRI 597
Query: 597 IFNVPGTPFNPHDTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERA 656
IFNVPGTPFNPHD+NSLK+QGAIYLKEVSFR+KD RH EV IKTLRRQVMARESERA
Sbjct: 598 IFNVPGTPFNPHDSNSLKNQGAIYLKEVSFRTKDSRHSSEVTQQIKTLRRQVMARESERA 657
Query: 657 ERATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEER 716
ERATLVTQEKLQLAGN+FKP++L +LWIRP F GR +KIPGTLEAH NGFR++T+RP+ER
Sbjct: 658 ERATLVTQEKLQLAGNKFKPLRLSELWIRPPFSGR-KKIPGTLEAHANGFRYSTTRPDER 716
Query: 717 VDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKR 776
VD++F NIKHAFFQPAEKEMITL+HFHLHNHIMVG KKTKDVQFYVEVMDVVQ+LGGG+R
Sbjct: 717 VDVLFANIKHAFFQPAEKEMITLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGGGRR 776
Query: 777 SAYDPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGV 836
SAYDPDEI+EEQRER RKNKINMDF F NRVND+W P+F LDLEFDQPLR+LGFHGV
Sbjct: 777 SAYDPDEIDEEQRERDRKNKINMDFNHFANRVNDMWQLPQFASLDLEFDQPLRELGFHGV 836
Query: 837 PHKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVL 896
PHK SAFI+PTSSCLVELIE PFLVV+L EIEIVNLERVG GQKNFDM I+FKDFKKDVL
Sbjct: 837 PHKTSAFIIPTSSCLVELIEYPFLVVSLSEIEIVNLERVGFGQKNFDMAIIFKDFKKDVL 896
Query: 897 RXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEFXXXXX 956
R KEWLDTTDIKYYES+LNLNWRQILKTITDDPQSFIDDGGWEF
Sbjct: 897 RVDSVPTSSLEGIKEWLDTTDIKYYESKLNLNWRQILKTITDDPQSFIDDGGWEFLNLDG 956
Query: 957 XXXXXXXXXXXXQGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKTWA 1016
+GYEP KGKTW
Sbjct: 957 SDSESGGSEESDKGYEPSDVEVESESEDEASESESLVESDDDEEEDSEQESEEEKGKTWD 1016
Query: 1017 ELEREATNADREKGDDSDSEEERKRRKGKTFGKSRGPPSGG 1057
ELEREATNADRE G +SDSEEERKRRK K FGKSR SGG
Sbjct: 1017 ELEREATNADREHGVESDSEEERKRRKMKAFGKSRPGTSGG 1057
>ZFIN|ZDB-GENE-031118-96 [details] [associations]
symbol:supt16h "suppressor of Ty 16 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0009987 "cellular
process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000994 Pfam:PF00557 ZFIN:ZDB-GENE-031118-96
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 EMBL:BX248243 EMBL:CABZ01078837
IPI:IPI00997833 Ensembl:ENSDART00000126840 ArrayExpress:E7F5E9
Bgee:E7F5E9 Uniprot:E7F5E9
Length = 1077
Score = 1275 (453.9 bits), Expect = 5.2e-165, Sum P(3) = 5.2e-165
Identities = 287/790 (36%), Positives = 442/790 (55%)
Query: 182 QLSDVTNGLSELFAVKDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMD 241
++ D++ ++ AVK+ E+ +KKA +T +V +K ++ ++D ++KV HS L +
Sbjct: 204 EIVDISTVVAYTMAVKEDGELALMKKAASITTDVFSKFFKERVMEIVDADEKVKHSRLAE 263
Query: 242 EAEKAILEPTKAGVKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAV 301
EKAI E K + V++CYPPI QSGG + L+ S S+ +++ + I CA+
Sbjct: 264 SVEKAI-EDRKFLGGVDPSTVEMCYPPIIQSGGNYSLKFSVVSDKNHMHFGA---ITCAM 319
Query: 302 GSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVER 361
G RY SYCSN+ R+ ++D + Y LL+ E + +K G K+S AY A + V++
Sbjct: 320 GIRYKSYCSNLVRTLMVDPSQEMQDNYNFLLQVEEELLKEMKHGVKLSEAYNAVMEFVKK 379
Query: 362 EAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNKPKN 421
E P+LV LTK+ G +G+EFRE L +N KN +K M+F++S+GF ++ N+ K +
Sbjct: 380 EKPDLVSKLTKNLGFAMGIEFREGSLVINQKNQFKLKRGMVFSISLGFADMINKEGKKEE 439
Query: 422 QM-FSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANGTEALP 480
Q ++L + DT+ + E + V K +K+V + + E + E L
Sbjct: 440 QKKYALFIGDTIQINEEDQATVLTPVKKKIKNVGIFLKNDD----EDEDEEEGDNAEELL 495
Query: 481 SK----TTLRSDN--QEISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTT 534
K L +D E++ EE RR HQ ELA Q NEE K
Sbjct: 496 GKGARSAALLADRTRNEMTAEEKRRTHQKELANQVNEEAKRRLTEQKGGQQIQ----KVR 551
Query: 535 TDLIAYKNVNDLLPP---RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRN 591
++YKNV+ + RD+ I ID+K+E V+ P++G PFH+ATI+ +S + +
Sbjct: 552 KSNVSYKNVSQMPKEKDIRDMKIFIDKKHETVIMPVFGIATPFHIATIKNISMSVEGDYT 611
Query: 592 CYIRIIFNVPGTPFNPHDTNSLKHQGAIYLKEVSFRS---KDP-------RHIGEVVGAI 641
Y+RI F VPG+ H+ N + A ++KE+++R+ K P ++ I
Sbjct: 612 -YLRINFFVPGSSLGRHEGNIFPNPEATFVKEITYRASNLKSPGDHSVPSTNLQNAFRII 670
Query: 642 KTLRRQVMARESERAERATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEA 701
K ++++ RE+E E+ +V Q+ L + NR P KL DL+IRP + ++ G+LEA
Sbjct: 671 KEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEA 727
Query: 702 HLNGFRFATSRPEERVDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFY 761
H NGFRF + R + +VDI++ NIKHA FQP + EMI ++HFHL N IM G K+ DVQFY
Sbjct: 728 HTNGFRFTSVRGD-KVDILYNNIKHAIFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFY 786
Query: 762 VEVMDVVQTLGGGKRSAYDPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLD 821
EV ++ LG + +D D++ EQ ER ++K+ F++F+ +V L + +
Sbjct: 787 TEVGEITTDLGKHQHM-HDRDDLYAEQMEREMRHKLKSAFKNFIEKVESLTKE------E 839
Query: 822 LEFDQPLRDLGFHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKN 881
LEF+ P RDLGF G P++++ + PTSS L + E P VVTL E+E+V+ ERV KN
Sbjct: 840 LEFEVPFRDLGFQGAPYRSTCLLQPTSSSLCNVTEWPPFVVTLDEVELVHFERVQFHLKN 899
Query: 882 FDMTIVFKDFKKDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQ 941
FD+ IV+KD+ K V KEWL++ DIKY E +LNW +I+KTI DDP+
Sbjct: 900 FDVVIVYKDYNKKVTMINAVPVNSLDPIKEWLNSCDIKYTEGIQSLNWTKIMKTIVDDPE 959
Query: 942 SFIDDGGWEF 951
F + GGW F
Sbjct: 960 GFFEQGGWSF 969
Score = 281 (104.0 bits), Expect = 5.2e-165, Sum P(3) = 5.2e-165
Identities = 66/234 (28%), Positives = 123/234 (52%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A S++ + F R+K LY +W K + ++ G D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVSLDKDAFYRRIKRLYGNWKKGEDEF-GKVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVK--RSAKDAVGAD-VVIHVKAKTDDGVELMD 136
E +T+MVF + +I FL S+KK L V + ++A G + + V+ K + D
Sbjct: 60 ELTDTIMVFCESKIIFLASKKKVEFLKQVAVTKGNENANGVPPITLLVREKNESNKVNFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A+R S +G VG ++ G +++W+D + G Q D++ ++ AV
Sbjct: 120 KMIEAIRG-----SKEGKTVGVFIKDKFPGEYMKSWSDTITAEGLQKVDISTVVAYTMAV 174
Query: 197 KDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDE-AEKAILE 249
K+ E+ +KKA +T +V +K ++ ++D V +++ + E E A+++
Sbjct: 175 KEDGELALMKKAASITTDVFSKFFKERVMEIVDISTVVAYTMAVKEDGELALMK 228
Score = 87 (35.7 bits), Expect = 5.2e-165, Sum P(3) = 5.2e-165
Identities = 23/50 (46%), Positives = 25/50 (50%)
Query: 1012 GKTWAELEREATNADREKGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKR 1061
GK W ELE EA ADRE + EE RK K G+S PP KR
Sbjct: 1030 GKDWDELEEEARKADRES--QYEEVEETSNRKRK--GRSSAPPPRSKKKR 1075
Score = 57 (25.1 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 756 KDVQFYVEVMDVVQTLGGGKRSAYDPDEIEEEQRERARKNK 796
+D E D +LG + S D DE+EEE R+ R+++
Sbjct: 1008 EDYSSETEDSDYSASLGSEEESGKDWDELEEEARKADRESQ 1048
Score = 46 (21.3 bits), Expect = 1.1e-160, Sum P(3) = 1.1e-160
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 1016 AELEREATN--ADREKGDDSDSEEE 1038
+E+E E N AD E+ ++ DS+E+
Sbjct: 985 SEIEDETFNPSADEEEEEEEDSDED 1009
Score = 39 (18.8 bits), Expect = 6.0e-160, Sum P(3) = 6.0e-160
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 1015 WAELEREATNADREKGDDSDSEEE 1038
W+ L+ E+ + E+ +S+ E+E
Sbjct: 967 WSFLDPESEGSGGEEDSESEIEDE 990
Score = 39 (18.8 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 1029 KGDDSDSEEERKRRKGKTFGK 1049
K DD D +EE + GK
Sbjct: 477 KNDDEDEDEEEGDNAEELLGK 497
>RGD|1310032 [details] [associations]
symbol:Supt16h "suppressor of Ty 16 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0009987 "cellular process"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557 RGD:1310032
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 EMBL:CH474040
InterPro:IPR013719 Pfam:PF08512 CTD:11198 OMA:MEIIDAD
OrthoDB:EOG40K7Z3 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 IPI:IPI00869870 RefSeq:NP_001100731.1
UniGene:Rn.93187 Ensembl:ENSRNOT00000016288 GeneID:305851
KEGG:rno:305851 UCSC:RGD:1310032 NextBio:655127 Uniprot:D4A4J0
Length = 1047
Score = 1513 (537.7 bits), Expect = 6.6e-162, Sum P(2) = 6.6e-162
Identities = 340/952 (35%), Positives = 538/952 (56%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y S D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ASIDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + V+ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLVREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A++ N G +G +++ G +++W+D L GF D++ ++ AV
Sbjct: 120 KMIEAIKESKN-----GKKIGVFSKDKFPGEFMKSWSDCLNKEGFDKVDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKAGVK 256
K+ E+ +KKA +T V NK ++ ++D ++KV HS L + EKAI E K
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 257 LRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSF 316
V++CYPPI QSGG ++L+ S S+ +++ + I CA+G R+ SYCSN+ R+
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 317 LIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGT 376
++D T + Y LL+ E + L+ G K+ Y + + VV+++ PEL+ +TK+ G
Sbjct: 291 MVDPTQEVQENYNFLLQLQEELLKELRHGVKICDVYNSVMDVVKKQKPELLNKITKNLGF 350
Query: 377 GIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNK-PKNQMFSLLLADTVIVG 435
G+G+EFRE L +N+KN +K M+F++++GF +L N+ K P+ + ++L + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 436 ENNPEVVTCKSSKAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEIS 493
E+ P V K VK+V + N K +AE G + + T R+ N E++
Sbjct: 411 EDGPATVLTSVKKKVKNVGIFLKNEDDEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMT 469
Query: 494 KEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P-- 549
EE RR HQ ELA Q NEE K ++YKN + L+P P
Sbjct: 470 AEEKRRAHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHI 524
Query: 550 RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHD 609
R++ I ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++
Sbjct: 525 REMKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNE 583
Query: 610 TNSLKHQGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERA 659
N + A ++KE+++R+ + + GE V A IK ++++ RE+E E+
Sbjct: 584 GNIFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKE 643
Query: 660 TLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDI 719
+V Q+ L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI
Sbjct: 644 GIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDI 699
Query: 720 MFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAY 779
++ NIKHA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +
Sbjct: 700 LYNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-H 758
Query: 780 DPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHK 839
D D++ EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++
Sbjct: 759 DRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYR 812
Query: 840 ASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXX 899
++ + PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 813 STCLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMIN 872
Query: 900 XXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 951
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 873 AIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 924
Score = 85 (35.0 bits), Expect = 6.6e-162, Sum P(2) = 6.6e-162
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 1012 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 1056
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1034
Score = 51 (23.0 bits), Expect = 2.6e-158, Sum P(2) = 2.6e-158
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 1015 WAELEREATNADREKGD-DSDSEEE 1038
W+ LE E +D E GD +S+ E+E
Sbjct: 922 WSFLEPEGEGSDAEDGDSESEIEDE 946
Score = 44 (20.5 bits), Expect = 1.4e-157, Sum P(2) = 1.4e-157
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1016 AELEREATNADREKGDDSDSEEERKRR 1042
++ +E+ ++ E G D D EE R+
Sbjct: 973 SDYSKESLGSEEESGKDWDELEEEARK 999
>MGI|MGI:1890948 [details] [associations]
symbol:Supt16 "suppressor of Ty 16" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0009987 "cellular process" evidence=IEA] InterPro:IPR000994
Pfam:PF00557 MGI:MGI:1890948 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
Gene3D:3.90.230.10 SUPFAM:SSF55920 InterPro:IPR013719 Pfam:PF08512
UniGene:Mm.21662 MEROPS:M24.974 eggNOG:COG5406 HOGENOM:HOG000209079
HOVERGEN:HBG092544 OrthoDB:EOG40K7Z3 InterPro:IPR013953
Pfam:PF08644 EMBL:AF323667 EMBL:AK148506 EMBL:AK158116
EMBL:BC012433 IPI:IPI00120344 RefSeq:NP_291096.2 UniGene:Mm.489682
ProteinModelPortal:Q920B9 SMR:Q920B9 DIP:DIP-55972N IntAct:Q920B9
STRING:Q920B9 PhosphoSite:Q920B9 PaxDb:Q920B9 PRIDE:Q920B9
GeneID:114741 KEGG:mmu:114741 UCSC:uc007tor.1 CTD:114741
InParanoid:Q920B9 NextBio:368789 CleanEx:MM_SUPT16H
Genevestigator:Q920B9 GermOnline:ENSMUSG00000035726 Uniprot:Q920B9
Length = 1047
Score = 1510 (536.6 bits), Expect = 1.4e-161, Sum P(2) = 1.4e-161
Identities = 338/952 (35%), Positives = 540/952 (56%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y S D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ASIDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + V+ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLVREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ +A++ +S G +G +++ G +++W+D L GF D++ ++ AV
Sbjct: 120 KMIDAIK-----ESKSGKKIGVFSKDKFPGEFMKSWSDCLNKEGFDKVDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKAGVK 256
K+ E+ +KKA +T V NK ++ ++D ++KV HS L + EKAI E K
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 257 LRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSF 316
V++CYPPI QSGG ++L+ S S+ +++ + I CA+G R+ SYCSN+ R+
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 317 LIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGT 376
++D T + Y LL+ E + L+ G K+ Y + + VV+++ PEL+ +TK+ G
Sbjct: 291 MVDPTQEVQENYNFLLQLQEELLKELRHGVKICDVYNSVMDVVKKQKPELLNKITKNLGF 350
Query: 377 GIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNK-PKNQMFSLLLADTVIVG 435
G+G+EFRE L +N+KN +K M+F++++GF +L N+ K P+ + ++L + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 436 ENNPEVVTCKSSKAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEIS 493
E+ P + K VK+V + N K +AE G + + T R+ N E++
Sbjct: 411 EDGPATILTSVKKKVKNVGIFLKNEDDEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMT 469
Query: 494 KEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P-- 549
EE RR HQ ELA Q NEE K ++YKN + L+P P
Sbjct: 470 AEEKRRAHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHI 524
Query: 550 RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHD 609
R++ I ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++
Sbjct: 525 REMKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNE 583
Query: 610 TNSLKHQGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERA 659
N + A ++KE+++R+ + + GE V A IK ++++ RE+E E+
Sbjct: 584 GNIFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKE 643
Query: 660 TLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDI 719
+V Q+ L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI
Sbjct: 644 GIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDI 699
Query: 720 MFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAY 779
++ NIKHA FQP + EMI ++HFHL N +M G K+ DVQFY EV ++ LG + +
Sbjct: 700 LYNNIKHALFQPCDGEMIIVLHFHLKNAVMFGKKRHTDVQFYTEVGEITTDLGKHQHM-H 758
Query: 780 DPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHK 839
D D++ EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++
Sbjct: 759 DRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYR 812
Query: 840 ASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXX 899
++ + PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 813 STCLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMIN 872
Query: 900 XXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 951
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 873 AIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 924
Score = 85 (35.0 bits), Expect = 1.4e-161, Sum P(2) = 1.4e-161
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 1012 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 1056
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1034
Score = 51 (23.0 bits), Expect = 5.4e-158, Sum P(2) = 5.4e-158
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 1015 WAELEREATNADREKGD-DSDSEEE 1038
W+ LE E +D E GD +S+ E+E
Sbjct: 922 WSFLEPEGEGSDAEDGDSESEIEDE 946
Score = 44 (20.5 bits), Expect = 3.0e-157, Sum P(2) = 3.0e-157
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1016 AELEREATNADREKGDDSDSEEERKRR 1042
++ +E+ ++ E G D D EE R+
Sbjct: 973 SDYSKESLGSEEESGKDWDELEEEARK 999
>UNIPROTKB|E1BNP8 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009987 "cellular process" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512 CTD:11198 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 GeneTree:ENSGT00390000014495
EMBL:DAAA02028315 IPI:IPI00696830 RefSeq:NP_001179321.1
UniGene:Bt.2157 PRIDE:E1BNP8 Ensembl:ENSBTAT00000027214
GeneID:514989 KEGG:bta:514989 NextBio:20871607 Uniprot:E1BNP8
Length = 1047
Score = 1507 (535.5 bits), Expect = 2.9e-161, Sum P(2) = 2.9e-161
Identities = 339/952 (35%), Positives = 537/952 (56%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y + D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + V+ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLVREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A++ N G +G +++ G +++W D L GF D++ ++ AV
Sbjct: 120 KMIEAIKESKN-----GKKIGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKAGVK 256
K+ E+ +KKA +T V NK ++ ++D ++KV HS L + EKAI E K
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 257 LRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSF 316
V++CYPPI QSGG ++L+ S S+ +++ + I CA+G R+ SYCSN+ R+
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 317 LIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGT 376
++D + + Y LL+ E + L+ G K+ Y A + VV+++ PEL+ +TK+ G
Sbjct: 291 MVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGF 350
Query: 377 GIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNK-PKNQMFSLLLADTVIVG 435
G+G+EFRE L +N+KN +K M+F++++GF +L N+ K P+ + ++L + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 436 ENNPEVVTCKSSKAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEIS 493
E+ P V K VK+V + N K +AE G + + T R+ N E++
Sbjct: 411 EDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMT 469
Query: 494 KEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P-- 549
EE RR HQ ELA Q NEE K ++YKN + L+P P
Sbjct: 470 AEEKRRAHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHI 524
Query: 550 RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHD 609
R++ I ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++
Sbjct: 525 REMKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNE 583
Query: 610 TNSLKHQGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERA 659
N + A ++KE+++R+ + + GE V A IK ++++ RE+E E+
Sbjct: 584 GNIFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKE 643
Query: 660 TLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDI 719
+V Q+ L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI
Sbjct: 644 GIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDI 699
Query: 720 MFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAY 779
++ NIKHA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +
Sbjct: 700 LYNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-H 758
Query: 780 DPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHK 839
D D++ EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++
Sbjct: 759 DRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYR 812
Query: 840 ASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXX 899
++ + PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 813 STCLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMIN 872
Query: 900 XXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 951
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 873 AIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 924
Score = 85 (35.0 bits), Expect = 2.9e-161, Sum P(2) = 2.9e-161
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 1012 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 1056
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1034
Score = 53 (23.7 bits), Expect = 6.9e-158, Sum P(2) = 6.9e-158
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1015 WAELEREATNADREKGD-DSDSEEE 1038
W+ LE E +D E+GD +S+ E+E
Sbjct: 922 WSFLEPEGEGSDAEEGDSESEIEDE 946
Score = 44 (20.5 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1016 AELEREATNADREKGDDSDSEEERKRR 1042
++ +E+ ++ E G D D EE R+
Sbjct: 973 SDYSKESLGSEEESGKDWDELEEEARK 999
Score = 39 (18.8 bits), Expect = 2.1e-156, Sum P(2) = 2.1e-156
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 1011 KGKTWAELEREATNADRE--KGDDSDSEEE 1038
+G + +E+E E N E + ++ DS+E+
Sbjct: 936 EGDSESEIEDETFNPSEEDYEEEEEDSDED 965
>UNIPROTKB|E2REU7 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0009987 "cellular process"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512
CTD:11198 OMA:MEIIDAD InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 EMBL:AAEX03009852 RefSeq:XP_851566.1
Ensembl:ENSCAFT00000009018 GeneID:612874 KEGG:cfa:612874
NextBio:20898360 Uniprot:E2REU7
Length = 1047
Score = 1505 (534.8 bits), Expect = 4.6e-161, Sum P(2) = 4.6e-161
Identities = 338/952 (35%), Positives = 536/952 (56%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y + D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + ++ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A++ N G +G +++ G ++ W D L GF D++ ++ AV
Sbjct: 120 KMIEAIKESKN-----GKKIGVFSKDKFPGEFMKNWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKAGVK 256
K+ E+ +KKA +T V NK ++ ++D ++KV HS L + EKAI E K
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 257 LRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSF 316
V++CYPPI QSGG ++L+ S S+ +++ + I CA+G R+ SYCSN+ R+
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 317 LIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGT 376
++D + + Y LL+ E + L+ G K+ Y A + VV+++ PEL+ +TK+ G
Sbjct: 291 MVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGF 350
Query: 377 GIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNK-PKNQMFSLLLADTVIVG 435
G+G+EFRE L +N+KN +K M+F++++GF +L N+ K P+ + ++L + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 436 ENNPEVVTCKSSKAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEIS 493
E+ P V K VK+V + N K +AE G + + T R+ N E++
Sbjct: 411 EDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMT 469
Query: 494 KEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P-- 549
EE RR HQ ELA Q NEE K ++YKN + L+P P
Sbjct: 470 AEEKRRAHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHI 524
Query: 550 RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHD 609
R++ I ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++
Sbjct: 525 REMKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNE 583
Query: 610 TNSLKHQGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERA 659
N + A ++KE+++R+ + + GE V A IK ++++ RE+E E+
Sbjct: 584 GNIFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKE 643
Query: 660 TLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDI 719
+V Q+ L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI
Sbjct: 644 GIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDI 699
Query: 720 MFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAY 779
++ NIKHA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +
Sbjct: 700 LYNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-H 758
Query: 780 DPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHK 839
D D++ EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++
Sbjct: 759 DRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYR 812
Query: 840 ASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXX 899
++ + PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 813 STCLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMIN 872
Query: 900 XXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 951
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 873 AIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 924
Score = 85 (35.0 bits), Expect = 4.6e-161, Sum P(2) = 4.6e-161
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 1012 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 1056
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1034
Score = 53 (23.7 bits), Expect = 1.1e-157, Sum P(2) = 1.1e-157
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1015 WAELEREATNADREKGD-DSDSEEE 1038
W+ LE E +D E+GD +S+ E+E
Sbjct: 922 WSFLEPEGEGSDAEEGDSESEIEDE 946
Score = 44 (20.5 bits), Expect = 1.0e-156, Sum P(2) = 1.0e-156
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1016 AELEREATNADREKGDDSDSEEERKRR 1042
++ +E+ ++ E G D D EE R+
Sbjct: 973 SDYSKESLGSEEESGKDWDELEEEARK 999
>UNIPROTKB|Q9Y5B9 [details] [associations]
symbol:SUPT16H "FACT complex subunit SPT16" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=TAS]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0050434 "positive regulation of viral transcription"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000994 Pfam:PF00557
Reactome:REACT_116125 GO:GO:0005694 GO:GO:0005654 GO:GO:0016032
GO:GO:0006260 GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0006337 Reactome:REACT_1788 GO:GO:0050434
Reactome:REACT_1892 GO:GO:0032786 InterPro:IPR013719 Pfam:PF08512
EMBL:AF152961 EMBL:BC000565 EMBL:BC014046 EMBL:BC064561
EMBL:BC073849 EMBL:AF164924 IPI:IPI00026970 RefSeq:NP_009123.1
UniGene:Hs.213724 ProteinModelPortal:Q9Y5B9 SMR:Q9Y5B9
DIP:DIP-42757N IntAct:Q9Y5B9 MINT:MINT-2823866 STRING:Q9Y5B9
MEROPS:M24.974 PhosphoSite:Q9Y5B9 DMDM:74753511 PaxDb:Q9Y5B9
PeptideAtlas:Q9Y5B9 PRIDE:Q9Y5B9 Ensembl:ENST00000216297
GeneID:11198 KEGG:hsa:11198 UCSC:uc001wao.2 CTD:11198
GeneCards:GC14M021819 HGNC:HGNC:11465 HPA:CAB022551 MIM:605012
neXtProt:NX_Q9Y5B9 PharmGKB:PA36251 eggNOG:COG5406
HOGENOM:HOG000209079 HOVERGEN:HBG092544 InParanoid:Q9Y5B9
OMA:MEIIDAD OrthoDB:EOG40K7Z3 PhylomeDB:Q9Y5B9 ChiTaRS:SUPT16H
GenomeRNAi:11198 NextBio:42621 ArrayExpress:Q9Y5B9 Bgee:Q9Y5B9
CleanEx:HS_SUPT16H Genevestigator:Q9Y5B9 GermOnline:ENSG00000092201
InterPro:IPR013953 Pfam:PF08644 Uniprot:Q9Y5B9
Length = 1047
Score = 1505 (534.8 bits), Expect = 4.6e-161, Sum P(2) = 4.6e-161
Identities = 338/952 (35%), Positives = 537/952 (56%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y + D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + ++ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A++ N G +G +++ G +++W D L GF D++ ++ AV
Sbjct: 120 KMIEAIKESKN-----GKKIGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKAGVK 256
K+ E+ +KKA +T V NK ++ ++D ++KV HS L + EKAI E K
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 257 LRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSF 316
V++CYPPI QSGG ++L+ S S+ +++ + I CA+G R+ SYCSN+ R+
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 317 LIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGT 376
++D + + Y LL+ E + L+ G K+ Y A + VV+++ PEL+ +TK+ G
Sbjct: 291 MVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGF 350
Query: 377 GIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNK-PKNQMFSLLLADTVIVG 435
G+G+EFRE L +N+KN +K M+F++++GF +L N+ K P+ + ++L + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 436 ENNPEVVTCKSSKAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEIS 493
E+ P V K VK+V + N K +AE G + + T R+ N E++
Sbjct: 411 EDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMT 469
Query: 494 KEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P-- 549
EE RR HQ ELA Q NEE K ++YKN + L+P P
Sbjct: 470 AEEKRRAHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHI 524
Query: 550 RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHD 609
R++ I ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++
Sbjct: 525 REMKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNE 583
Query: 610 TNSLKHQGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERA 659
N + A ++KE+++R+ + + GE V A IK ++++ RE+E E+
Sbjct: 584 GNIFPNPEATFVKEITYRASNIKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKE 643
Query: 660 TLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDI 719
+V Q+ L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI
Sbjct: 644 GIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDI 699
Query: 720 MFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAY 779
++ NIKHA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +
Sbjct: 700 LYNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-H 758
Query: 780 DPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHK 839
D D++ EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++
Sbjct: 759 DRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYR 812
Query: 840 ASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXX 899
++ + PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 813 STCLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMIN 872
Query: 900 XXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 951
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 873 AIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 924
Score = 85 (35.0 bits), Expect = 4.6e-161, Sum P(2) = 4.6e-161
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 1012 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 1056
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1034
Score = 53 (23.7 bits), Expect = 1.1e-157, Sum P(2) = 1.1e-157
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1015 WAELEREATNADREKGD-DSDSEEE 1038
W+ LE E +D E+GD +S+ E+E
Sbjct: 922 WSFLEPEGEGSDAEEGDSESEIEDE 946
Score = 44 (20.5 bits), Expect = 1.0e-156, Sum P(2) = 1.0e-156
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1016 AELEREATNADREKGDDSDSEEERKRR 1042
++ +E+ ++ E G D D EE R+
Sbjct: 973 SDYSKESLGSEEESGKDWDELEEEARK 999
>UNIPROTKB|F1S8K5 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009987 "cellular process" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 GeneTree:ENSGT00390000014495
EMBL:CT797461 Ensembl:ENSSSCT00000031400 Uniprot:F1S8K5
Length = 1048
Score = 1501 (533.4 bits), Expect = 1.2e-160, Sum P(2) = 1.2e-160
Identities = 338/953 (35%), Positives = 538/953 (56%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y + D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + ++ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A++ N G +G +++ G +++W D L GF D++ ++ AV
Sbjct: 120 KMIEAIKESKN-----GKKIGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKAGVK 256
K+ E+ +KKA +T V NK ++ ++D ++KV HS L + EKAI E K
Sbjct: 175 KEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAI-EEKKYLAG 233
Query: 257 LRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSF 316
V++CYPPI QSGG ++L+ S S+ +++ + I CA+G R+ SYCSN+ R+
Sbjct: 234 ADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCAMGIRFKSYCSNLVRTL 290
Query: 317 LIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGT 376
++D + + Y LL+ E + L+ G K+ Y A + VV+++ PEL+ +TK+ G
Sbjct: 291 MVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGF 350
Query: 377 GIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNK-PKNQMFSLLLADTVIVG 435
G+G+EFRE L +N+KN +K M+F++++GF +L N+ K P+ + ++L + DTV+V
Sbjct: 351 GMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVD 410
Query: 436 ENNPEVVTCKSSKAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEIS 493
E+ P V K VK+V + N K +AE G + + T R+ N E++
Sbjct: 411 EDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMT 469
Query: 494 KEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P-- 549
EE RR HQ ELA Q NEE K ++YKN + L+P P
Sbjct: 470 AEEKRRAHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHI 524
Query: 550 RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHD 609
R++ I ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++
Sbjct: 525 REMKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNE 583
Query: 610 TNSLKHQGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERA 659
N + A ++KE+++R+ + + GE V A IK ++++ RE+E E+
Sbjct: 584 GNIFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKE 643
Query: 660 TLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDI 719
+V Q+ L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI
Sbjct: 644 GIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDI 699
Query: 720 MFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAY 779
++ NIKHA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +
Sbjct: 700 LYNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-H 758
Query: 780 DPDEI-EEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPH 838
D D++ E+Q ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P+
Sbjct: 759 DRDDLYAEQQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPY 812
Query: 839 KASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRX 898
+++ + PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 813 RSTCLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMI 872
Query: 899 XXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 951
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 873 NAIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 925
Score = 85 (35.0 bits), Expect = 1.2e-160, Sum P(2) = 1.2e-160
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 1012 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 1056
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 988 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1035
Score = 53 (23.7 bits), Expect = 3.0e-157, Sum P(2) = 3.0e-157
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1015 WAELEREATNADREKGD-DSDSEEE 1038
W+ LE E +D E+GD +S+ E+E
Sbjct: 923 WSFLEPEGEGSDAEEGDSESEIEDE 947
Score = 44 (20.5 bits), Expect = 2.7e-156, Sum P(2) = 2.7e-156
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1016 AELEREATNADREKGDDSDSEEERKRR 1042
++ +E+ ++ E G D D EE R+
Sbjct: 974 SDYSKESLGSEEESGKDWDELEEEARK 1000
>DICTYBASE|DDB_G0282677 [details] [associations]
symbol:spt16 "FACT complex subunit SPT16"
species:44689 "Dictyostelium discoideum" [GO:0009987 "cellular
process" evidence=IEA] [GO:0035101 "FACT complex" evidence=ISS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISS] [GO:0001672 "regulation of chromatin
assembly or disassembly" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557
dictyBase:DDB_G0282677 GO:GO:0005694 GO:GO:0006355
EMBL:AAFI02000047 GenomeReviews:CM000152_GR GO:GO:0006260
GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0001672 GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644 OMA:GARYKNY
RefSeq:XP_640196.1 ProteinModelPortal:Q54S43 STRING:Q54S43
EnsemblProtists:DDB0231753 GeneID:8623736 KEGG:ddi:DDB_G0282677
Uniprot:Q54S43
Length = 1072
Score = 1514 (538.0 bits), Expect = 2.3e-159, Sum P(2) = 2.3e-159
Identities = 357/960 (37%), Positives = 538/960 (56%)
Query: 15 TGGANAYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNI 74
TG A +++ NF R+K LY WN S+ W SA+ L +A +E Y K ++L
Sbjct: 19 TGPREA-TLDAGNFCKRVKILYDSWNSD-SNLWKSANSLVLALGQPNESNPYQKVTSLQT 76
Query: 75 WLLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVV-IHVKAKTDDGVE 133
WL GYE +T++VF++K+I + + KK +L K S + V ++ I T D +
Sbjct: 77 WLFGYELKDTIIVFLEKEIYIVSTSKKINLFQ--KLSETEQVKTELSSIKFNFLTIDKSD 134
Query: 134 LMDAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSEL 193
+ F + ++ +G +G I +ET G L W L D+T LS
Sbjct: 135 KNKSNFEKLIGEAT-KAGSN--IGVIIKETYIGDLALQWEAALNECPLTKVDITPALSSC 191
Query: 194 FAVKDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKA 253
VKD +E N+ + +T V+ ++PK+E +ID+ ++ TH+ L D A P K
Sbjct: 192 LLVKDLQEQKNIITSAKITSKVLKSHILPKIETIIDKGERQTHNQLADYAADIFESPEKI 251
Query: 254 GVKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIA 313
KL E+VD Y PI QSGG +DLR SA+S+D L++ G++I+ + G+RY +YCSNIA
Sbjct: 252 SSKLTVEHVDYSYVPIIQSGGIYDLRASASSDDNPLHF--GTIIV-SCGARYKNYCSNIA 308
Query: 314 RSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVV-EREAPELVPNLTK 372
R+++ID T Q K Y +LL I A+KP S+ Y+ A+ + E PELV + K
Sbjct: 309 RTYIIDPTSDQKKNYAILLNVQSNVIKAIKPDVTFSSLYEKAIQTIKESSKPELVDHFPK 368
Query: 373 SAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNKP-KNQMFSLLLADT 431
+ G GIG+EF+ES LNA N R +KA M N++ GFQ + N K K++ +SLL++DT
Sbjct: 369 NVGYGIGIEFQESLAVLNATNSRTLKAGMTLNIACGFQKISNPEGKDEKSKTYSLLISDT 428
Query: 432 VIVG-ENNPEVVTCKSSKAVKDVAYSFNXXXXXXXR---PKVKAEA-NGTEALPSKTTLR 486
V++ E EV+T KA DV Y P VK E + + + +T +
Sbjct: 429 VLLNDEGKVEVLTDVGKKA-SDVVYMLGGEDDDDDNDNDPSVKLELPDDVKGITGRT-IE 486
Query: 487 SDNQEISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDL 546
+ + S EE RR HQ ++ QKN + K T + Y + L
Sbjct: 487 TKEKSKSVEERRRDHQ-KMLEQKNLQEAENKIKAMTDPNG-----KKGTPEVDYTAITKL 540
Query: 547 LP--------PRDLM---IQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIR 595
P P+D++ + ID K E VLFPI+G MVPFH++TI+ +S ++ YIR
Sbjct: 541 QPIYSSVGAYPQDIVKNKMYIDPKKETVLFPIFGYMVPFHISTIKNISKSEE-----YIR 595
Query: 596 IIFNVPGTPFNPH--DTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARES 653
+ FN P T + D + Q +Y++EV+++ DP+ + + IK L+++ RE+
Sbjct: 596 VNFNTP-TSYTQEQIDAGFVPPQ-LMYIREVTYKVNDPKVLANNIRLIKELKKKFTTRET 653
Query: 654 ERAERATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRP 713
E E+ L+TQEKL L +F P +L ++ RP G R I G LEAH NG RF +
Sbjct: 654 EDREKRNLITQEKLILLRGKF-P-RLPEVHARPTLSGARRTI-GILEAHENGIRFNPTST 710
Query: 714 EER--VDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTL 771
++R +D+++ NIKHA +Q A++E + ++HFHLH+ +M+G KKTKDVQFY+E+ ++ Q+L
Sbjct: 711 KDRTPIDVLYKNIKHAIYQQADQESMAVIHFHLHDALMIGKKKTKDVQFYIEISEMSQSL 770
Query: 772 GGGKRSAYDPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDL 831
R ++ DE EEE+RERA K KIN DF++F+ RV ++ +P LEFD P R+L
Sbjct: 771 DVSSR--FN-DEEEEERRERALKEKINNDFKTFIKRVEEIAPEP-----GLEFDVPYREL 822
Query: 832 GFHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDF 891
GF+GVP+ ++ FI P+ CL+ ++E PF V+TL ++EI ER KNFD++ VFKD+
Sbjct: 823 GFYGVPNVSTVFIQPSVHCLLSILEPPFFVLTLDDVEIACFERAIRSLKNFDLSFVFKDY 882
Query: 892 KKDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 951
+ +R KEWLD+ +IK+Y+S N NW++I+ TI D + F DDGGW F
Sbjct: 883 NRPPIRISVIPRNYFETVKEWLDSFNIKFYQSERNYNWKRIMDTIKSDVKKFHDDGGWSF 942
Score = 60 (26.2 bits), Expect = 2.3e-159, Sum P(2) = 2.3e-159
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 1011 KGKTWAELEREATNADREKGDDSDSEEERKRRKGKTFGKSRGPPS 1055
+G+ W +LE++A D+ K D E +++R K+ S P S
Sbjct: 988 EGENWEDLEQKAERDDKMKTFD---ETNKRKRDEKSVSSSNRPSS 1029
Score = 40 (19.1 bits), Expect = 3.0e-157, Sum P(2) = 3.0e-157
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1015 WAELEREATNADREKGDD---SDSEE 1037
W+ L+ E + + GDD S+S+E
Sbjct: 940 WSFLDLEEEEEEEDSGDDDYHSNSDE 965
>POMBASE|SPBP8B7.19 [details] [associations]
symbol:spt16 "FACT complex subunit Spt16" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0035101 "FACT
complex" evidence=IDA] [GO:0043486 "histone exchange" evidence=IC]
[GO:0044732 "mitotic spindle pole body" evidence=IDA]
InterPro:IPR000994 Pfam:PF00557 PomBase:SPBP8B7.19 GO:GO:0006355
GO:GO:0044732 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0006261 GO:GO:0000790 GO:GO:0006368 GO:GO:0043486
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0006334 GO:GO:0035101
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079
OMA:MEIIDAD InterPro:IPR013953 Pfam:PF08644 OrthoDB:EOG4QC4DF
PIR:T40813 RefSeq:NP_596526.1 PDB:3CB5 PDB:3CB6 PDBsum:3CB5
PDBsum:3CB6 ProteinModelPortal:O94267 SMR:O94267 DIP:DIP-44081N
STRING:O94267 EnsemblFungi:SPBP8B7.19.1 GeneID:2541355
KEGG:spo:SPBP8B7.19 EvolutionaryTrace:O94267 NextBio:20802464
Uniprot:O94267
Length = 1019
Score = 1464 (520.4 bits), Expect = 2.4e-153, Sum P(2) = 2.4e-153
Identities = 338/959 (35%), Positives = 531/959 (55%)
Query: 21 YSINLENFSTRLKALYSHWNKHKSD---YWGSADVLAIATPPASEDLR-YLKSSALNIWL 76
Y I+ F RL L + W K++ D + D + + T A +D Y KS+AL+ WL
Sbjct: 4 YEIDEITFHKRLGILLTSW-KNEEDGKTLFQDCDSILV-TVGAHDDTNPYQKSTALHTWL 61
Query: 77 LGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVIHVKAK-TDDGVELM 135
LGYEFP T+++ K +I L S KA++L K + ADV I + K ++ +L
Sbjct: 62 LGYEFPSTLILLEKHRITILTSVNKANML--TKLAETKGAAADVNILKRTKDAEENKKLF 119
Query: 136 DAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQ--NSGFQLSDVTNGLSEL 193
+ I +R+ + VG ++ +G+ + W + S F L D + GL++
Sbjct: 120 EKIIEYIRATNKK-------VGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDASLGLAKC 172
Query: 194 FAVKDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKA 253
A+KD++E+ N+K A ++ VM+K V +L ID+ KK+THS D+ E I
Sbjct: 173 LAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFF 232
Query: 254 GVK-LRAENVDI-----CYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNS 307
K L+ ++D+ CY PI QSGG++DL+PSA ++D L+ G V++C++G RY S
Sbjct: 233 QTKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDDRNLH---GDVVLCSLGFRYKS 289
Query: 308 YCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELV 367
YCSN+ R++L D Q K Y L+ + + G + Y L ++ + P+L
Sbjct: 290 YCSNVGRTYLFDPDSEQQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLE 349
Query: 368 PNLTKSAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNKPKNQM---F 424
PN ++ G GIG+EFRES L +NAKN RV++A M N+SIGF NL N PKN +
Sbjct: 350 PNFVRNLGAGIGIEFRESSLLVNAKNPRVLQAGMTLNLSIGFGNLINP--HPKNSQSKEY 407
Query: 425 SLLLADTVIVGENNPEVVTCKSSKAVKDVAYSF---NXXXXXXXRPKVKAEANGTEALPS 481
+LLL DT+ + ++P V T S KA D++Y F + +P+ K GT + S
Sbjct: 408 ALLLIDTIQITRSDPIVFT-DSPKAQGDISYFFGEDDSSLEDGVKPR-KPPTRGTATISS 465
Query: 482 -KTTLRSDNQEI--SKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLI 538
K RS+ +++ S E+ R +HQ +LA +K E T
Sbjct: 466 HKGKTRSETRDLDDSAEKRRVEHQKQLASRKQAE--GLQRFAQGSVPSSGIEKPTVKRFE 523
Query: 539 AYKNVNDLLPPR--DLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRI 596
+YK + LP +L I +D + ++++ PI+G VPFH++T++ +S+ D Y+R+
Sbjct: 524 SYKR-DSQLPQAIGELRILVDYRAQSIILPIFGRPVPFHISTLKN-ASKNDEGNFVYLRL 581
Query: 597 IFNVPGTPFNPHDTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERA 656
F PG D + A +++ +FRS + + +V I+ +++ RE+ER
Sbjct: 582 NFVSPGQIGGKKDELPFEDPNAQFIRSFTFRSSNNSRMSQVFKDIQDMKKAATKRETERK 641
Query: 657 ERATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATS-RPEE 715
E A ++ Q+KL N+ +P ++D+++RP G+ ++PG +E H NG R+ + R +
Sbjct: 642 EFADVIEQDKLIEIKNK-RPAHINDVYVRPAIDGK--RLPGFIEIHQNGIRYQSPLRSDS 698
Query: 716 RVDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGK 775
+D++F N+KH FFQP E E+I L+H HL IMVG +KT+DVQFY EV D+ G K
Sbjct: 699 HIDLLFSNMKHLFFQPCEGELIVLIHVHLKAPIMVGKRKTQDVQFYREVSDIQFDETGNK 758
Query: 776 RSAY---DPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLG 832
+ Y D DE+E+EQ ER R+ +++ +F+SF ++ + G +E D P R+L
Sbjct: 759 KRKYMYGDEDELEQEQEERRRRAQLDREFKSFAEKIAEA-----SEGR-IELDIPFRELA 812
Query: 833 FHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFK 892
F+GVP +++ + PT+ CLV+L +TPF V+TL EIEI +LERV G KNFD+ +F+DF+
Sbjct: 813 FNGVPFRSNVLLQPTTDCLVQLTDTPFTVITLNEIEIAHLERVQFGLKNFDLVFIFQDFR 872
Query: 893 KDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 951
+ + KEWLD+ DI +YE LNLNW I+KT+ +DP +F ++GGW F
Sbjct: 873 RPPIHINTIPMEQLDNVKEWLDSCDICFYEGPLNLNWTTIMKTVNEDPIAFFEEGGWGF 931
Score = 53 (23.7 bits), Expect = 2.4e-153, Sum P(2) = 2.4e-153
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 1012 GKTWAELEREATNADREKGDDSDSEEERKRRK 1043
G+ W ELER+A D K D + +KR +
Sbjct: 989 GEDWDELERKARQEDA-KHDAFEERPSKKRHR 1019
Score = 42 (19.8 bits), Expect = 3.5e-152, Sum P(2) = 3.5e-152
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 1021 EATNADREKGDDSDSEEERKRRK 1043
E+ D E G+D D E ERK R+
Sbjct: 980 ESEVEDEESGEDWD-ELERKARQ 1001
Score = 39 (18.8 bits), Expect = 7.3e-152, Sum P(2) = 7.3e-152
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1019 EREATNADREKGDDSDSEE 1037
E EA++AD ++ +SEE
Sbjct: 949 EYEASDADPSDEEEEESEE 967
>UNIPROTKB|Q9W603 [details] [associations]
symbol:supt16h "FACT complex subunit SPT16" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
Gene3D:3.90.230.10 SUPFAM:SSF55920 InterPro:IPR013719 Pfam:PF08512
CTD:11198 HOVERGEN:HBG092544 InterPro:IPR013953 Pfam:PF08644
EMBL:AB004794 EMBL:BC072746 RefSeq:NP_001084166.1 UniGene:Xl.7983
ProteinModelPortal:Q9W603 PRIDE:Q9W603 GeneID:399345
KEGG:xla:399345 Xenbase:XB-GENE-979310 Uniprot:Q9W603
Length = 1035
Score = 1429 (508.1 bits), Expect = 9.3e-152, Sum P(2) = 9.3e-152
Identities = 327/954 (34%), Positives = 525/954 (55%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ E + R+K + W K D + + D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKEAYYRRIKRFFGSWKKG-DDEFANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVE-LM 135
E +T+MVF +++I F+ S+KK L + + ++A G + + V+ K ++ +
Sbjct: 60 ELTDTIMVFCEEKILFMASKKKVEFLKQIANTKGNENANGTPAITLLVREKQNESNKGNF 119
Query: 136 DAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFA 195
D + A++ S G +G ++ G +++W D L F+ D++ ++ A
Sbjct: 120 DKMIEAIKV-----SKKGKRIGVFIKDKFPGDFMKSWYDILNKESFEKVDISASVAYTIA 174
Query: 196 VKDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKAGV 255
VK++ E+ +KKA +T +V +K ++ ++D ++KV H L + EKAI + G
Sbjct: 175 VKEEGELNLMKKAASITSDVFSKFFKDRVMEIVDADEKVRHGKLAESVEKAIEDKKYLG- 233
Query: 256 KLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARS 315
+++CYPPI QSGG ++L+ S S+ +++ + I CA+G RY SYCSN+ R+
Sbjct: 234 GTDPSTIEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGA---ITCALGIRYKSYCSNLVRT 290
Query: 316 FLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAG 375
++D T + Y LL+ E + LK G K+ AYQ + V+++ P+L+ +TK+ G
Sbjct: 291 LMVDPTQEMQENYNFLLQLQEELLKELKHGAKICDAYQVIMDQVKKQKPDLMSKITKTLG 350
Query: 376 TGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNK-PKNQMFSLLLADTVIV 434
+G+EFRE L +N KN +K M+F+V +G L N+ K P+ + ++L + DTV+V
Sbjct: 351 FAMGIEFREGSLVINNKNQYKLKKGMVFSVHLGLAELNNKMGKKPEEKTYALFVGDTVLV 410
Query: 435 GENNPEVVTCKSSKAVKDVA-YSFNXXXXXXXRPKVKAE---ANGTEALPSKTTLRSDNQ 490
E V K VK+V + K +AE G+ A + T R+ N
Sbjct: 411 NEEGAATVLTNVKKKVKNVGIFLKKEDEEEEEEEKDEAEDLLGRGSRAA-ALLTERTRN- 468
Query: 491 EISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDL-LPP 549
E++ EE RR HQ ELA Q N+E K ++YKN + + P
Sbjct: 469 EMTAEEKRRTHQKELATQLNDEAKRRLTEQKGGQQTM----KARKSNVSYKNASQVPKEP 524
Query: 550 --RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNP 607
R++ + ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+
Sbjct: 525 ELREMKLYIDKKYETVIMPVFGISTPFHIATIKNISMSVEGDYT-YLRINFFCPGSALGR 583
Query: 608 HDTNSLKHQGAIYLKEVSFRSK------DPR----HIGEVVGAIKTLRRQVMARESERAE 657
++ N + A ++KE+++R+ DP ++ IK ++++ RE+E E
Sbjct: 584 NEGNIFPNPEATFVKEITYRASNVKTPGDPSVPSLNLQNAFRIIKEVQKRYKTREAEEKE 643
Query: 658 RATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERV 717
+ +V Q+ L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +V
Sbjct: 644 KEGIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KV 699
Query: 718 DIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRS 777
DI++ NIKHA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG +
Sbjct: 700 DILYNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM 759
Query: 778 AYDPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVP 837
+D D++ EQ ER ++K+ F++F+ +V L + DLEF+ P RDLGF+G P
Sbjct: 760 -HDRDDLYAEQLEREMRHKLKTAFKNFIEKVESLTKE------DLEFEIPFRDLGFNGAP 812
Query: 838 HKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLR 897
++++ + PTSS LV E P VVTL E+E+V+ ERV KNFDM IV+K++ K V
Sbjct: 813 YRSTCLLQPTSSSLVNTTEWPPFVVTLDEVELVHFERVQFHLKNFDMVIVYKEYGKKVTM 872
Query: 898 XXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 951
KEWL++ DIKY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 873 INAIPMASLDPIKEWLNSCDIKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 926
Score = 73 (30.8 bits), Expect = 9.3e-152, Sum P(2) = 9.3e-152
Identities = 21/52 (40%), Positives = 24/52 (46%)
Query: 1012 GKTWAELEREATNADREKGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRTK 1063
GK W ELE EA ADRE S EE +++ G K P KR K
Sbjct: 988 GKDWDELEEEARKADRE----SLYEEVEEQKSGNRKRKGHAPLPNPSKKRKK 1035
Score = 42 (19.8 bits), Expect = 1.8e-148, Sum P(2) = 1.8e-148
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 1021 EATNADREKGDDSDSEEERKRR 1042
E+ +++ E G D D EE R+
Sbjct: 979 ESADSEEESGKDWDELEEEARK 1000
Score = 42 (19.8 bits), Expect = 1.8e-148, Sum P(2) = 1.8e-148
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 1011 KGKTWAELEREATN-ADREKGDDSDSEEE 1038
+G + +EL+ E N ++ E+ ++ DS+E+
Sbjct: 938 EGDSESELDDETFNPSEDEEEEEEDSDED 966
Score = 41 (19.5 bits), Expect = 2.2e-148, Sum P(2) = 2.2e-148
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1015 WAELEREATNADREKGDDSDSE 1036
W+ LE + +D +GD S+SE
Sbjct: 924 WSFLEPDGEGSDAAEGD-SESE 944
>FB|FBgn0002183 [details] [associations]
symbol:dre4 "dre4" species:7227 "Drosophila melanogaster"
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0001672 "regulation of
chromatin assembly or disassembly" evidence=IMP] [GO:0035101 "FACT
complex" evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005694 EMBL:AE014296
GO:GO:0022008 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0003682 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0032968
GO:GO:0001672 GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 OMA:GARYKNY EMBL:AF023269
EMBL:AF023270 EMBL:BT010116 EMBL:AB083008 PIR:T13928 PIR:T13929
RefSeq:NP_476610.2 RefSeq:NP_728686.2 UniGene:Dm.5723
ProteinModelPortal:Q8IRG6 SMR:Q8IRG6 STRING:Q8IRG6 PaxDb:Q8IRG6
EnsemblMetazoa:FBtr0072865 GeneID:38248 KEGG:dme:Dmel_CG1828
CTD:38248 FlyBase:FBgn0002183 InParanoid:Q8IRG6 OrthoDB:EOG40CFXV
GenomeRNAi:38248 NextBio:807718 Bgee:Q8IRG6 GermOnline:CG1828
Uniprot:Q8IRG6
Length = 1083
Score = 1471 (522.9 bits), Expect = 9.8e-151, P = 9.8e-151
Identities = 358/1071 (33%), Positives = 553/1071 (51%)
Query: 19 NAYSINLENFSTRLKALYSHWNKHK---SDYWGSADVLAIATPPASEDLRYLKSSALNIW 75
+++ ++ E F R+K LY+ W D + D + ++ ED+ Y KS AL +W
Sbjct: 2 SSFVLDKEAFVRRVKRLYTEWRAPSIGHDDALRNLDCI-MSIVGVEEDVMYSKSMALQLW 60
Query: 76 LLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVIHVKAKTDDGVELM 135
LLGYE +T+ VF + FL S+KK L + ++ ++ + V+ +TD
Sbjct: 61 LLGYELTDTISVFCSDAVYFLTSKKKIEFLKQTQNITEEGF-PEINLLVRDRTDKDQGNF 119
Query: 136 DAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFA 195
+ + A+++ S G +G A++ G E W L S F+ D++ ++ L
Sbjct: 120 EKLIKALQN-----SKKGKRLGVFAKDAYPGEFSEAWKKSLTASKFEHVDISTIIAYLMC 174
Query: 196 VKDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPT-KAG 254
KD+ EI N++KA ++ ++ NK + ++ ++ID ++KV H+ L D E AI E +G
Sbjct: 175 PKDESEINNIRKASLVSMDIFNKYLKDEIMDIIDSDRKVKHNKLSDGCEAAIGEKKYTSG 234
Query: 255 VKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIAR 314
+ R +D+ YPPI QSGGA+ L+ SA ++ L++ VI+C++G+RY SYCSNI+R
Sbjct: 235 LDPRL--LDMAYPPIIQSGGAYSLKFSAVADKNPLHF---GVIVCSLGARYKSYCSNISR 289
Query: 315 SFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSA 374
+FL++ T + Y L+ E + L PG K+ Y+ L V++E P +V NL KS
Sbjct: 290 TFLVNPTEAMQENYTFLVSVQEEILKLLVPGTKLCDVYEKTLDFVKKEKPSMVDNLPKSF 349
Query: 375 GTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQN-QTNKPKNQMFSLLLADTVI 433
G +GLEFRE+ + + K ++K M+FN+ +G NL N + + + ++L + DTV+
Sbjct: 350 GFAMGLEFRENSIVIGPKCQALLKKNMVFNLHVGISNLTNPEATDKEGKNYALFIGDTVL 409
Query: 434 VGENNPEVVTCKSSKAVKDVAYSF--NXXXXXXXRPKVKAEANGTEALP-SK--TTLRSD 488
VGE +P V S K +K+V + K E GTE L SK L S
Sbjct: 410 VGEQSPASVMTPSKKKIKNVGIFIKDDSDEEDVDDKKTAKEDQGTEILGRSKRNAVLESK 469
Query: 489 -NQEISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDL- 546
EI+ EE R++HQ ELA+Q NE K + ++YK+++ +
Sbjct: 470 LRNEINTEEKRKEHQRELAQQLNERAKDRLARQGNSKEVE----KVRKNTVSYKSISQMP 525
Query: 547 LPP--RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTP 604
P ++L + +D+K E V+ P++G VPFH++TI+ +S Q Y+RI F PG
Sbjct: 526 REPEVKELKLYVDKKYETVIMPVFGIQVPFHISTIKNIS-QSVEGEYTYLRINFFHPGAT 584
Query: 605 FNPHDTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGA-----------IKTLRRQVMARES 653
++ A ++KEV++RS + + GEV GA IK ++++ RE+
Sbjct: 585 MGRNEGGLYPQPEATFVKEVTYRSSNVKEHGEV-GAPSANLNNAFRLIKEVQKRFKTREA 643
Query: 654 ERAERATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRP 713
E E+ LV Q+ L L+ N+ P KL DL+IRP + ++ G+LEAH NGFR+ + R
Sbjct: 644 EEREKEDLVKQDTLILSQNKGNP-KLKDLYIRPNIVTK--RMTGSLEAHSNGFRYISVRG 700
Query: 714 EERVDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGG 773
+ +VDI++ NIK AFFQP + EMI L+HFHL IM G KK DVQFY EV ++ LG
Sbjct: 701 D-KVDILYNNIKSAFFQPCDGEMIILLHFHLKYAIMFGKKKHVDVQFYTEVGEITTDLGK 759
Query: 774 GKRSAYDPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGF 833
+ +D D++ EQ ER ++K+ F+SF +V + +EFD P R+LGF
Sbjct: 760 HQHM-HDRDDLAAEQAERELRHKLKTAFKSFCEKVETMTKSV------VEFDTPFRELGF 812
Query: 834 HGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKK 893
G P +++ + PTS LV L E P V+TL ++E+V+ ERV +NFDM VFK++ K
Sbjct: 813 PGAPFRSTVTLQPTSGSLVNLTEWPPFVITLDDVELVHFERVQFHLRNFDMIFVFKEYNK 872
Query: 894 DVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEFXX 953
V KEWL++ DI+Y E +LNW++I+KTITDDP+ F + GGW F
Sbjct: 873 KVAMVNAIPMNMLDHVKEWLNSCDIRYSEGVQSLNWQKIMKTITDDPEGFFEQGGWTFLD 932
Query: 954 --XXXXXXXXXXXXXXXQGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 1011
+ Y P
Sbjct: 933 PESGSEGENETAESEEDEAYNPTDAESDEESDEDSEYSEASEDSEESDEDLGSDEES--- 989
Query: 1012 GKTWAELEREATNADREKGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRT 1062
GK W++LEREA DR + D + K R GK K G S P ++
Sbjct: 990 GKDWSDLEREAAEEDR----NHDYAADDKPRNGKFDSKKHGKSSKHSPSKS 1036
>ASPGD|ASPL0000031805 [details] [associations]
symbol:AN5102 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009987 "cellular
process" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0035101 "FACT complex" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
EMBL:BN001305 Gene3D:3.90.230.10 SUPFAM:SSF55920 EMBL:AACD01000088
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079
InterPro:IPR013953 Pfam:PF08644 RefSeq:XP_662706.1 STRING:Q5B2X8
GeneID:2871397 KEGG:ani:AN5102.2 OMA:FENIKHV OrthoDB:EOG4QC4DF
Uniprot:Q5B2X8
Length = 1019
Score = 1369 (487.0 bits), Expect = 6.0e-146, Sum P(2) = 6.0e-146
Identities = 323/950 (34%), Positives = 506/950 (53%)
Query: 28 FSTRLKALYSHWNKHK---SDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGYEFPET 84
F RL + Y+ W K + +G A + I E Y K++A++ WLLGYEFP T
Sbjct: 12 FFNRLSSFYAAWKADKRSTNSVFGGAGSIIILMGKTDEANSYQKNNAIHFWLLGYEFPAT 71
Query: 85 VMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVIHVKAKTDDGVELMDAIFNAVRS 144
+ VF + + + + KKA L +K K + ++++ K + ++ L + + ++S
Sbjct: 72 LFVFTPEVMYVVTTAKKAKHLEPLK-GGK--IPVEILVTTKDQ-EEKTRLFEKCVDIIKS 127
Query: 145 QSNVDSGDGPIVGSIARETPEGRLLETWADRLQN--SG-FQLSDVTNGLSEL-FAVKDQE 200
N VG + R+T G +E W R+ SG + D++ LS F+VKD +
Sbjct: 128 AGNK-------VGILPRDTTTGPFVEDWK-RVYGKISGDVEEVDISPALSAACFSVKDTD 179
Query: 201 EIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLL-------MDEAEKAILEPTKA 253
E+++++ A +M+ V ++ ++DEEK++TH L +D+A K + K
Sbjct: 180 ELVSIRNASRACSGLMSDYFVDEMSRLLDEEKQMTHKALSMRIDAKIDDA-KFFNKLAKL 238
Query: 254 GVKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIA 313
+ + +D Y P+ QSGG +DL+ +A S+D L + G +II G RY +Y S I
Sbjct: 239 PSEFDPQQIDWAYGPVIQSGGKYDLKLTAVSDDNNL--EPG-IIIAGFGIRYKTYSSIIG 295
Query: 314 RSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKS 373
R++L+D T Q Y +LL HEA + + G Y A+ +V PEL + K+
Sbjct: 296 RTYLVDPTKSQEANYSLLLSVHEAVLKEARDGVVAKELYNKAIGIVRARKPELESHFVKN 355
Query: 374 AGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNKPKNQ-MFSLLLADTV 432
G GIG+E R+S + LN KN RV+K+ M F++++G +++ + K K + ++S+++ DTV
Sbjct: 356 VGAGIGIELRDSNMILNGKNTRVLKSGMTFSITVGLVDVEEPSVKDKKKNVYSMMITDTV 415
Query: 433 IVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANGTEALPSK----TTLRSD 488
VGE P V T + + V++ F K K E + A+ S+ T LR++
Sbjct: 416 RVGEQGPHVFTKDAGIDMDSVSFYFGDEEEPQKPAKEKKETKSS-AIASRNVTRTKLRAE 474
Query: 489 NQ-EISK--EELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVND 545
++++ E RR+HQ ELA +K +E K +YK N
Sbjct: 475 RPTQVNEGAEARRREHQKELAAKKTKE--GLDRFAGTTGDDNGVTQKKFKRFESYKRDNQ 532
Query: 546 L-LPPRDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTP 604
L +DL + +D K V+ P+ G VPFH+ TI+ +S+ D Y+RI F PG
Sbjct: 533 LPAKVKDLTVYVDHKASTVIVPVMGRPVPFHINTIKN-ASKSDEGEYAYLRINFLSPGQG 591
Query: 605 FNPHDTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQ 664
D + A +L+ ++ RSKD +V I LR+ + RE E+ E +V Q
Sbjct: 592 VGRKDDQPFEDLSAHFLRNLTLRSKDNDRFAQVAQDITELRKNALRREQEKKEMEDVVEQ 651
Query: 665 EKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNI 724
+KL NR +P+KL D+++RP G+ ++PG +E H NG R+ + E VD++F N+
Sbjct: 652 DKLVEIRNR-RPVKLPDVYLRPPLDGK--RVPGEVEIHQNGLRYVSPFRNEHVDVLFSNV 708
Query: 725 KHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAY---DP 781
KH FFQP E+I L+H HL IM+G +KT+D+QFY E ++ G +R + D
Sbjct: 709 KHLFFQPCAHELIVLIHVHLKTPIMIGKRKTRDIQFYREATEMQFDETGNRRRKHRYGDE 768
Query: 782 DEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKAS 841
+E E EQ ER R+ ++ +F++F ++ D G K G+D+ D P R++GF GVP++++
Sbjct: 769 EEFEAEQEERRRRAALDREFKAFAEKIADA-G--KDEGVDV--DIPFREIGFTGVPNRSN 823
Query: 842 AFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXX 901
I PT+ LV+L E PFLV++L EIEI +LERV G KNFD+ VFKDF + +
Sbjct: 824 VLIQPTTDALVQLTEPPFLVISLNEIEIAHLERVQFGLKNFDLVFVFKDFHRAPVHINTI 883
Query: 902 XXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 951
K+WLD+ DI Y E LNLNW I+KT+ DP F DGGW F
Sbjct: 884 PVENLEGVKDWLDSVDIAYTEGPLNLNWTTIMKTVVSDPYGFFADGGWSF 933
Score = 78 (32.5 bits), Expect = 6.0e-146, Sum P(2) = 6.0e-146
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 1012 GKTWAELEREATNADREKG-DDSDSEEERKR 1041
G+ W ELE +A DRE G DD D ++RKR
Sbjct: 989 GEDWDELEHQAKKKDRESGLDDEDRGKKRKR 1019
Score = 39 (18.8 bits), Expect = 8.0e-142, Sum P(2) = 8.0e-142
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1024 NADR-EKGDDSDSEEERKRRKGKTFG 1048
+AD E G+D D E + ++K + G
Sbjct: 982 SADEDESGEDWDELEHQAKKKDRESG 1007
>WB|WBGene00018849 [details] [associations]
symbol:F55A3.3 species:6239 "Caenorhabditis elegans"
[GO:0009987 "cellular process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0051301 "cell
division" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005694 GO:GO:0006355 GO:GO:0006260
GO:GO:0018996 GO:GO:0006281 GO:GO:0006351 GO:GO:0000910
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0006997 GO:GO:0001703
EMBL:FO080793 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406
HOGENOM:HOG000209079 InterPro:IPR013953 Pfam:PF08644
RefSeq:NP_492821.1 ProteinModelPortal:Q9N5R9 SMR:Q9N5R9
STRING:Q9N5R9 PaxDb:Q9N5R9 EnsemblMetazoa:F55A3.3.1
EnsemblMetazoa:F55A3.3.2 GeneID:172984 KEGG:cel:CELE_F55A3.3
UCSC:F55A3.3 CTD:172984 WormBase:F55A3.3
GeneTree:ENSGT00390000014495 InParanoid:Q9N5R9 OMA:GARYKNY
NextBio:877797 Uniprot:Q9N5R9
Length = 1030
Score = 1355 (482.0 bits), Expect = 1.9e-138, P = 1.9e-138
Identities = 340/1048 (32%), Positives = 516/1048 (49%)
Query: 23 INLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGYEFP 82
+N + F R + LY HW K +D G + ++A D Y K+SAL WL G+E
Sbjct: 8 LNKDLFFQRAERLYEHWEKG-AD--GLDSIKSLAFVYGETDNPYTKTSALFTWLFGHEIA 64
Query: 83 ETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVIHV-KAKTDDGVELMDAIFNA 141
+TV++ +K I L S +K G V + + V + + KTD + + +
Sbjct: 65 DTVLLLLKDHIYILGSNRKVEFFGSVTGDNQSSGKVPTVSTLLRDKTDKDAGNFEKLIDH 124
Query: 142 VRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAVKDQEE 201
++S GD VG+ +E + +W L+ G +DVT + LFAVKD +E
Sbjct: 125 IKSAG----GD---VGNFVKEKFSSEFVSSWNKALEEGGVNKNDVTLAFTHLFAVKDDKE 177
Query: 202 IMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKAGVKLRAEN 261
+ ++K+ T +E +ID+EK+V HS+L +E A ++ +K L
Sbjct: 178 MDLIRKSAQATTASWTAARARYVE-IIDQEKRVRHSVLSNEFA-AFMKDSKVQQALAKYE 235
Query: 262 VDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSFLIDAT 321
D CY PI SGG + + + S++ L+ G+ II + G+R + YC+N+ R+ LI +
Sbjct: 236 ADTCYDPIVMSGGNYSFKWNHESSESHLHSQFGT-IITSFGARLSEYCTNLTRTMLIFPS 294
Query: 322 PLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSA-GTGIGL 380
YE +L A A I ALKPG K+S Y+ + + ++P+L L K G G+
Sbjct: 295 SELETAYEAILAAELAVIAALKPGAKLSDVYKIGIDTLTEKSPKLAETLNKKELGFATGI 354
Query: 381 EFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNKPKNQMFSLLLADTVIVGENNP- 439
EFRES L ++AK D VVKA M+F V IG ++ N+ K + ++ ++DT++V E
Sbjct: 355 EFRESRLAISAKCDEVVKAGMVFIVYIGVDSIPNKNKGEKGKPAAIAISDTILVKEEGDN 414
Query: 440 EVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANGTEALPSKTTLRSDNQ-EISKEELR 498
E++T K+ +K F K + L + + + EELR
Sbjct: 415 EILTEKAKSRLKSNVIKFKEEQENREAEKDNDQKKMLGRGQRSVVLTDQTRNKTTNEELR 474
Query: 499 RQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLPPRD---LMIQ 555
++ Q EL Q NE K+ ++YK D ++I
Sbjct: 475 KERQKELGVQLNE----LAKARLSKQGGGTDEKKSKKSNVSYKTEERFPQDADVQKMLIF 530
Query: 556 IDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTNSLKH 615
+D+K ++V+ PI+G VPFH++ I+ S + + Y+RI F PG+ D+ H
Sbjct: 531 VDRKYDSVVVPIFGIPVPFHISMIKNCSQSVEGDFT-YLRINFATPGSQVGK-DSGQFPH 588
Query: 616 QGAIYLKEVSFRS---KD-------PRH-IGEVVGAIKTLRRQVMARESERAERATLVTQ 664
A Y+KE++FR+ KD P H + IK ++++ E+E E+ V Q
Sbjct: 589 PLAHYMKELTFRASNIKDHHSDSTAPSHNLSTAFRLIKEMQKRFKTEEAEEREKEGAVKQ 648
Query: 665 EKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNI 724
+KL L+ N+ P KL DL IRP ++I G+LEAH NGFR+ TS +R+D+++ NI
Sbjct: 649 DKLILSQNKLNP-KLKDLLIRPNI--IQKRITGSLEAHTNGFRY-TSLRGDRIDVLYNNI 704
Query: 725 KHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEI 784
KHAFFQP + EMI L+HFHL N ++ G KK KDVQFY EV ++ LG D D++
Sbjct: 705 KHAFFQPCDNEMIILLHFHLKNPVLWGKKKYKDVQFYTEVGEITTDLGK-YHHMQDRDDM 763
Query: 785 EEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFI 844
+ EQ+ER + ++N F SF +V+ L EFD P LGF GVP++++ +
Sbjct: 764 QSEQQEREMRRRLNAAFNSFCEKVSRLTND------QFEFDSPFAGLGFFGVPYRSATTL 817
Query: 845 VPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXX 904
PT+SCLV L E P +VTL E+E+V+ ERV L KNFDM +FKD+K
Sbjct: 818 KPTASCLVNLTEWPTFIVTLSEVELVHFERVSLQLKNFDMVFIFKDYKIKPQMVAQIPMS 877
Query: 905 XXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEFXXXXXXXXXXXXX 964
KEWL T DI Y E +LNW +++KTITDD ++F ++GGW F
Sbjct: 878 SIDKIKEWLHTCDIWYSEGIQSLNWAKVMKTITDDLEAFFEEGGWSFLNVESDNEEAMDD 937
Query: 965 XXXXQGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XKGKTWAELEREAT 1023
Y+P +GK W++LE EA
Sbjct: 938 SDDSDAYDPEEEDASAGSGSESDEDESEGEETESDDDDEGSLDSDESEGKDWSDLEEEAA 997
Query: 1024 NAD-REKGDDSDSEEERKRRKGKTFGKS 1050
NAD R + ++ + +RKR G S
Sbjct: 998 NADKRREVEEPSRDRDRKRPHSSKSGPS 1025
>CGD|CAL0005222 [details] [associations]
symbol:CDC68 species:5476 "Candida albicans" [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0008023 "transcription elongation factor complex"
evidence=IGI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IGI] [GO:0031298 "replication
fork protection complex" evidence=IEA] [GO:0005816 "spindle pole
body" evidence=IEA] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=IEA] [GO:0035101 "FACT complex" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0034401 "regulation of transcription by
chromatin organization" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0034724 "DNA replication-independent nucleosome
organization" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 CGD:CAL0005222 GO:GO:0005694
GO:GO:0006260 GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0008023 GO:GO:0032784 EMBL:AACQ01000084
EMBL:AACQ01000083 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406
InterPro:IPR013953 Pfam:PF08644 EMBL:AF253047 RefSeq:XP_715540.1
RefSeq:XP_715596.1 ProteinModelPortal:Q5A1D5 STRING:Q5A1D5
GeneID:3642741 GeneID:3642787 KEGG:cal:CaO19.10402
KEGG:cal:CaO19.2884 Uniprot:Q5A1D5
Length = 1060
Score = 797 (285.6 bits), Expect = 1.3e-131, Sum P(3) = 1.3e-131
Identities = 183/501 (36%), Positives = 278/501 (55%)
Query: 469 VKAEANGTEALPSKTTLRSDN---QEISKEELRRQHQAELARQKNEETXXXXXXXXXXXX 525
+K E+ A+ K+ LR +N + + E+LR++ Q +L ++ +E
Sbjct: 487 LKLESTENTAI-LKSKLRHENTNADDANSEKLRQEIQIKLHEKRLQEGLARFSKADATDA 545
Query: 526 XXXX-XXKTTTDLIAYKNVNDLLPPRDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSS 584
K + + + + DL I ID KN+ ++ PI G VPFH+ + ++ S
Sbjct: 546 DDFKPIFKKYESYVRESQIPNSV--NDLKIHIDYKNQTIILPISGRPVPFHINSYKS-GS 602
Query: 585 QQDTNRNCYIRIIFNVPGTPFNPHDTNSLKHQGA---IYLKEVSFRSKDPRHIGEVVGAI 641
Q + Y+R+ FN PG N L ++ + +L+ ++ RS+D + + +V AI
Sbjct: 603 QNEEGDFTYLRLNFNSPGAGGNVTKKQELPYEDSPDNSFLRSITIRSRDRQRMVDVYKAI 662
Query: 642 KTLRRQVMARESERAERATLVTQEKL-QLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLE 700
+ L++ + RE E+ + A ++TQ L +L G+R K KL++++IRP +KI G L+
Sbjct: 663 QDLKKDSVKREQEKKQMADVITQANLIELKGSRVK--KLNNVFIRPT--PDTKKIGGVLQ 718
Query: 701 AHLNGFRFATS-------RPEERVDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNK 753
H NG R+ + + ++RVD++F NIKH FFQP + E+I L+H HL N IM+G +
Sbjct: 719 IHENGLRYQSQPQSQSNFKNDQRVDVLFSNIKHLFFQPCKDELIVLIHCHLKNPIMIGKR 778
Query: 754 KTKDVQFYVEVMDVVQTLGGGKRSAY---DPDEIEEEQRERARKNKINMDFQSFVNRVND 810
KT DVQFY E D+ GG++ Y D DE+++EQ ER RK ++ +F+ F + D
Sbjct: 779 KTFDVQFYREASDMAFDETGGRKRKYRYGDEDELQQEQEERRRKALLDKEFKGFAELIAD 838
Query: 811 LWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIV 870
+G+ ++ D P R+LGF GVP ++S VPT CLV+LI+ P+LVVTL EIEI
Sbjct: 839 -----SSHGM-VDLDIPFRELGFQGVPFRSSVLCVPTRDCLVQLIDPPYLVVTLEEIEIA 892
Query: 871 NLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWR 930
+LERV G KNFD+ VFKDF K V+ K WL DI E ++NLNW
Sbjct: 893 HLERVQFGLKNFDLVFVFKDFNKPVVHINTIPVELLEDVKSWLTDVDIPISEGQMNLNWV 952
Query: 931 QILKTITDDPQSFIDDGGWEF 951
QI+KT+ DP F DGGW F
Sbjct: 953 QIMKTVLADPYQFFIDGGWAF 973
Score = 472 (171.2 bits), Expect = 1.3e-131, Sum P(3) = 1.3e-131
Identities = 144/430 (33%), Positives = 215/430 (50%)
Query: 61 SEDLRYLKSSALNIWLLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADV 120
S+D Y KS+ L WLLGYEF T + K+ F+ S+ K+ L + D V +
Sbjct: 38 SDDNTYKKSTVLQNWLLGYEFIHTAIYITDKKCIFITSEGKSKHLKHLTNQKPDLVELWI 97
Query: 121 -VIHVKAKTDDGVELMDAIFNAVRSQSNV--DSGDGPIV---GSIARETPEGRLLETWAD 174
V+ ++L++ + + D DG + I + T D
Sbjct: 98 RTKDVEHNKQLFIKLLETMTKLDSKYGKILKDKYDGKFIDEWNQILNDDNNNNNNNTTND 157
Query: 175 RLQNSGFQLSDVTNGLSELFAVKDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKV 234
S L+ VT +S+ AVKD EE N K A + VM V + ++D+EKK+
Sbjct: 158 HAL-SAVDLA-VT--VSQALAVKDSEEFNNTKIASNASV-VMMDTFVNDMMIIVDDEKKI 212
Query: 235 THSLLMDEAEKAILE-----PTKAGVKLRA-------ENVDICYPPIFQSGGAFDLRPSA 282
T+S L D+ E I TK G L E ++ CY PI QSGG +DL+PSA
Sbjct: 213 TNSQLTDQIEDKIENNKWYLKTKLGKNLLQSIKDFDPEYLEYCYSPIIQSGGDYDLKPSA 272
Query: 283 ASNDELLYYDSGSVIICAVGSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAI-GA 341
S D+ L + VI+ ++G RY SYCSNIAR+FLID T Y+ LL+ + +
Sbjct: 273 VSTDKPLIGEG--VILSSIGLRYKSYCSNIARTFLIDPTSEMETNYDFLLQLQKYIVDNL 330
Query: 342 LKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKN-DRVVKAK 400
LK G + YQ + +++E P+LV + TK+ G +G+EFR+S LNAK DR +
Sbjct: 331 LKDGVPANKVYQDTIDYIKKERPDLVNHFTKNCGWLLGMEFRDSTFILNAKTTDRKLTTG 390
Query: 401 MIFNVSIGFQNLQN-----------QTNKPKN-QMFSLLLADTVIVGENNPEVVTCKSSK 448
I +++IGF NL N +TN KN Q ++LLL DT+ + +++ ++T SK
Sbjct: 391 QIISLTIGFNNLSNDKNDKNDKNDNKTNHQKNKQTYALLLTDTIKITDDSSILLT-NYSK 449
Query: 449 AVKDVAYSFN 458
+++SFN
Sbjct: 450 DRAAISFSFN 459
Score = 57 (25.1 bits), Expect = 1.3e-131, Sum P(3) = 1.3e-131
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 1012 GKTWAELEREATNADREKGDD 1032
G+ W LER+A ADR G D
Sbjct: 1040 GEDWDALERKAAKADRNSGFD 1060
>UNIPROTKB|Q5A1D5 [details] [associations]
symbol:SPT16 "FACT complex subunit SPT16" species:237561
"Candida albicans SC5314" [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IGI] [GO:0008023
"transcription elongation factor complex" evidence=IGI] [GO:0032784
"regulation of DNA-dependent transcription, elongation"
evidence=IGI] InterPro:IPR000994 Pfam:PF00557 CGD:CAL0005222
GO:GO:0005694 GO:GO:0006260 GO:GO:0006281 GO:GO:0006368
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0008023 GO:GO:0032784
EMBL:AACQ01000084 EMBL:AACQ01000083 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644 EMBL:AF253047
RefSeq:XP_715540.1 RefSeq:XP_715596.1 ProteinModelPortal:Q5A1D5
STRING:Q5A1D5 GeneID:3642741 GeneID:3642787 KEGG:cal:CaO19.10402
KEGG:cal:CaO19.2884 Uniprot:Q5A1D5
Length = 1060
Score = 797 (285.6 bits), Expect = 1.3e-131, Sum P(3) = 1.3e-131
Identities = 183/501 (36%), Positives = 278/501 (55%)
Query: 469 VKAEANGTEALPSKTTLRSDN---QEISKEELRRQHQAELARQKNEETXXXXXXXXXXXX 525
+K E+ A+ K+ LR +N + + E+LR++ Q +L ++ +E
Sbjct: 487 LKLESTENTAI-LKSKLRHENTNADDANSEKLRQEIQIKLHEKRLQEGLARFSKADATDA 545
Query: 526 XXXX-XXKTTTDLIAYKNVNDLLPPRDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSS 584
K + + + + DL I ID KN+ ++ PI G VPFH+ + ++ S
Sbjct: 546 DDFKPIFKKYESYVRESQIPNSV--NDLKIHIDYKNQTIILPISGRPVPFHINSYKS-GS 602
Query: 585 QQDTNRNCYIRIIFNVPGTPFNPHDTNSLKHQGA---IYLKEVSFRSKDPRHIGEVVGAI 641
Q + Y+R+ FN PG N L ++ + +L+ ++ RS+D + + +V AI
Sbjct: 603 QNEEGDFTYLRLNFNSPGAGGNVTKKQELPYEDSPDNSFLRSITIRSRDRQRMVDVYKAI 662
Query: 642 KTLRRQVMARESERAERATLVTQEKL-QLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLE 700
+ L++ + RE E+ + A ++TQ L +L G+R K KL++++IRP +KI G L+
Sbjct: 663 QDLKKDSVKREQEKKQMADVITQANLIELKGSRVK--KLNNVFIRPT--PDTKKIGGVLQ 718
Query: 701 AHLNGFRFATS-------RPEERVDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNK 753
H NG R+ + + ++RVD++F NIKH FFQP + E+I L+H HL N IM+G +
Sbjct: 719 IHENGLRYQSQPQSQSNFKNDQRVDVLFSNIKHLFFQPCKDELIVLIHCHLKNPIMIGKR 778
Query: 754 KTKDVQFYVEVMDVVQTLGGGKRSAY---DPDEIEEEQRERARKNKINMDFQSFVNRVND 810
KT DVQFY E D+ GG++ Y D DE+++EQ ER RK ++ +F+ F + D
Sbjct: 779 KTFDVQFYREASDMAFDETGGRKRKYRYGDEDELQQEQEERRRKALLDKEFKGFAELIAD 838
Query: 811 LWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIV 870
+G+ ++ D P R+LGF GVP ++S VPT CLV+LI+ P+LVVTL EIEI
Sbjct: 839 -----SSHGM-VDLDIPFRELGFQGVPFRSSVLCVPTRDCLVQLIDPPYLVVTLEEIEIA 892
Query: 871 NLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWR 930
+LERV G KNFD+ VFKDF K V+ K WL DI E ++NLNW
Sbjct: 893 HLERVQFGLKNFDLVFVFKDFNKPVVHINTIPVELLEDVKSWLTDVDIPISEGQMNLNWV 952
Query: 931 QILKTITDDPQSFIDDGGWEF 951
QI+KT+ DP F DGGW F
Sbjct: 953 QIMKTVLADPYQFFIDGGWAF 973
Score = 472 (171.2 bits), Expect = 1.3e-131, Sum P(3) = 1.3e-131
Identities = 144/430 (33%), Positives = 215/430 (50%)
Query: 61 SEDLRYLKSSALNIWLLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADV 120
S+D Y KS+ L WLLGYEF T + K+ F+ S+ K+ L + D V +
Sbjct: 38 SDDNTYKKSTVLQNWLLGYEFIHTAIYITDKKCIFITSEGKSKHLKHLTNQKPDLVELWI 97
Query: 121 -VIHVKAKTDDGVELMDAIFNAVRSQSNV--DSGDGPIV---GSIARETPEGRLLETWAD 174
V+ ++L++ + + D DG + I + T D
Sbjct: 98 RTKDVEHNKQLFIKLLETMTKLDSKYGKILKDKYDGKFIDEWNQILNDDNNNNNNNTTND 157
Query: 175 RLQNSGFQLSDVTNGLSELFAVKDQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKV 234
S L+ VT +S+ AVKD EE N K A + VM V + ++D+EKK+
Sbjct: 158 HAL-SAVDLA-VT--VSQALAVKDSEEFNNTKIASNASV-VMMDTFVNDMMIIVDDEKKI 212
Query: 235 THSLLMDEAEKAILE-----PTKAGVKLRA-------ENVDICYPPIFQSGGAFDLRPSA 282
T+S L D+ E I TK G L E ++ CY PI QSGG +DL+PSA
Sbjct: 213 TNSQLTDQIEDKIENNKWYLKTKLGKNLLQSIKDFDPEYLEYCYSPIIQSGGDYDLKPSA 272
Query: 283 ASNDELLYYDSGSVIICAVGSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAI-GA 341
S D+ L + VI+ ++G RY SYCSNIAR+FLID T Y+ LL+ + +
Sbjct: 273 VSTDKPLIGEG--VILSSIGLRYKSYCSNIARTFLIDPTSEMETNYDFLLQLQKYIVDNL 330
Query: 342 LKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKN-DRVVKAK 400
LK G + YQ + +++E P+LV + TK+ G +G+EFR+S LNAK DR +
Sbjct: 331 LKDGVPANKVYQDTIDYIKKERPDLVNHFTKNCGWLLGMEFRDSTFILNAKTTDRKLTTG 390
Query: 401 MIFNVSIGFQNLQN-----------QTNKPKN-QMFSLLLADTVIVGENNPEVVTCKSSK 448
I +++IGF NL N +TN KN Q ++LLL DT+ + +++ ++T SK
Sbjct: 391 QIISLTIGFNNLSNDKNDKNDKNDNKTNHQKNKQTYALLLTDTIKITDDSSILLT-NYSK 449
Query: 449 AVKDVAYSFN 458
+++SFN
Sbjct: 450 DRAAISFSFN 459
Score = 57 (25.1 bits), Expect = 1.3e-131, Sum P(3) = 1.3e-131
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 1012 GKTWAELEREATNADREKGDD 1032
G+ W LER+A ADR G D
Sbjct: 1040 GEDWDALERKAAKADRNSGFD 1060
>TAIR|locus:2139217 [details] [associations]
symbol:GTC2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR013953 Pfam:PF08644 IPI:IPI00536333
RefSeq:NP_192805.2 UniGene:At.54263 EnsemblPlants:AT4G10670.1
GeneID:826660 KEGG:ath:AT4G10670 ArrayExpress:F4JME7 Uniprot:F4JME7
Length = 343
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 245/346 (70%), Positives = 282/346 (81%)
Query: 553 MIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTNS 612
MI +D K++ VL PIYG MVPF+V TIRTV Q+T IR+IFNVPGTP NP+D S
Sbjct: 1 MITVDHKSDTVLLPIYGRMVPFNVTTIRTVLGNQNT-----IRVIFNVPGTPLNPND--S 53
Query: 613 LKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQLAGN 672
LK++ AIYLKEVSFR+KD RH +VV +K+LRR+VMARESERAER +LV QEKLQ+ N
Sbjct: 54 LKNKDAIYLKEVSFRTKDSRHSSDVVQQVKSLRRKVMARESERAERTSLVNQEKLQIVRN 113
Query: 673 RFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNIKHAFFQPA 732
KP+ L +LWIRP F GR +K GTLEAH+NGFR++T+ ERVD++F NIKHAFFQPA
Sbjct: 114 NSKPLSLSNLWIRPPFSGR-KKNRGTLEAHVNGFRYSTTN--ERVDVLFANIKHAFFQPA 170
Query: 733 EKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRS-AYDPDEIEEEQRER 791
EKEM TL+HFHLHNHIMVG KKTKDVQFYVEVMDVVQ+LGG +RS AYD DEI EEQRER
Sbjct: 171 EKEMTTLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGGRRRSSAYDADEIVEEQRER 230
Query: 792 ARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIVPTSSCL 851
RKNKINMDF F N+VND+W P+F L LEFDQPLR+ GF+GVPHK S FI+PTSSCL
Sbjct: 231 DRKNKINMDFNHFANQVNDMWQLPQFASLSLEFDQPLREFGFNGVPHKTSTFIIPTSSCL 290
Query: 852 VELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLR 897
VEL E+PFLVV L EIEIVNLERVG GQK+FDM I+FKD KKDVLR
Sbjct: 291 VELTESPFLVVCLSEIEIVNLERVGFGQKSFDMAIIFKDLKKDVLR 336
>SGD|S000003175 [details] [associations]
symbol:SPT16 "Subunit of the heterodimeric FACT complex
(Spt16p-Pob3p), which assoc" species:4932 "Saccharomyces
cerevisiae" [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IPI]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IDA]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=IDA] [GO:0031298 "replication fork protection complex"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IGI;IPI]
[GO:0008023 "transcription elongation factor complex" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IPI] [GO:0034401 "regulation of transcription by
chromatin organization" evidence=IMP] [GO:0006334 "nucleosome
assembly" evidence=IDA] [GO:0009987 "cellular process"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0034724 "DNA
replication-independent nucleosome organization" evidence=IDA]
InterPro:IPR000994 Pfam:PF00557 SGD:S000003175 EMBL:BK006941
GO:GO:0006281 GO:GO:0006261 GO:GO:0000790 GO:GO:0034401
GO:GO:0006368 GO:GO:0045899 EMBL:M27174 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0006334 GO:GO:0031298 GO:GO:0060261
GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512 GO:GO:0034724
eggNOG:COG5406 HOGENOM:HOG000209079 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 OrthoDB:EOG4QC4DF EMBL:M73533
EMBL:Z72729 PIR:S18512 RefSeq:NP_011308.1 PDB:3BIP PDB:3BIQ
PDB:3BIT PDBsum:3BIP PDBsum:3BIQ PDBsum:3BIT
ProteinModelPortal:P32558 SMR:P32558 DIP:DIP-2546N IntAct:P32558
MINT:MINT-427889 STRING:P32558 PaxDb:P32558 PeptideAtlas:P32558
EnsemblFungi:YGL207W GeneID:852665 KEGG:sce:YGL207W CYGD:YGL207w
OMA:THEAVIS EvolutionaryTrace:P32558 NextBio:971957
Genevestigator:P32558 GermOnline:YGL207W Uniprot:P32558
Length = 1035
Score = 1107 (394.7 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 292/890 (32%), Positives = 439/890 (49%)
Query: 168 LLETWADRLQNSGFQLSDVTNGLSELFAVKDQEEIMNVKKAGYLTYNVMNKIVVPKLENV 227
L + W + N LS + G + + E + V + +T N + K+EN
Sbjct: 169 LSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKIT----NAKLSDKIENK 224
Query: 228 IDEEKKVTHSLLMDEAEKAILEPTKAGVKLRAENVDICYPPIFQSGGAFDLRPSAAS-ND 286
ID+ K + L D + A+ P K + +D Y PI QSG FDLR SA S ND
Sbjct: 225 IDDVKFLKQ-LSPDLS--ALCPPN---YKFNFDLLDWTYSPIIQSGKKFDLRVSARSTND 278
Query: 287 ELLYYDSGSVIICAVGSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAH-EAAIGALKPG 345
+L Y +G I+ + G RYN+YCSNI R+FLID + + Y+ LL E LKPG
Sbjct: 279 QL--YGNGC-ILASCGIRYNNYCSNITRTFLIDPSEEMANNYDFLLTLQKEIVTNILKPG 335
Query: 346 NKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKND-RVVKAKMIFN 404
Y++ + +E+ PELVPN TK+ G+ IGLEFR+S LN KND R ++ FN
Sbjct: 336 RTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFILNVKNDYRKIQRGDCFN 395
Query: 405 VSIGFQNLQNQTNKPKNQMFSLLLADTVIV--GENNPEVVTCKSSKAVKDVAYSFNXXXX 462
+S GF NL++ ++ N ++L LADTV + E P +KA +++ FN
Sbjct: 396 ISFGFNNLKD--SQSANN-YALQLADTVQIPLDETEPPRFLTNYTKAKSQISFYFNNEEE 452
Query: 463 XXXRPKVKAEANGTEALPSK------TTLRSDN----QEISKEELRRQHQAELARQKNEE 512
+ K + A + P + T LR + ++ KE++R+++Q +L +K E+
Sbjct: 453 DNNKKK-SSPATKVPSKPDRNSKILRTKLRGEARGGAEDAQKEQIRKENQKKL-HEKLEK 510
Query: 513 TXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLPP--RDLMIQIDQKNEAVLFPIYGS 570
+ +Y + LP RDL I +D K++ ++ PIYG
Sbjct: 511 NGLLRFSAADANGPDSEPRQYFKKYESYVR-DSQLPTNIRDLRIHVDWKSQTIILPIYGR 569
Query: 571 MVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFN-PHDTNSLKHQGAI---YLKEVSF 626
VPFH+ + + S+ + Y+R+ FN PG+ L ++ + +++ ++
Sbjct: 570 PVPFHINSYKN-GSKNEEGEYTYLRLNFNSPGSSGGISKKVEELPYEESADNQFVRSITL 628
Query: 627 RSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQLAGNRFKPIKLHDLWIRP 686
RSKD + E I L+++ RE ER A +V Q+KL + + +L +++RP
Sbjct: 629 RSKDGDRMSETFKQIADLKKEATKREQERKALADVVQQDKL-IENKTGRTKRLDQIFVRP 687
Query: 687 VFGGRGRKIPGTLEAHLNGFRFATS-RPEERVDIMFGNIKHAFFQPAEKEMITLVHFHLH 745
+++P T+ H NG RF + R + R+DI+F NIK+ FQ + E+I ++H HL
Sbjct: 688 --NPDTKRVPSTVFIHENGIRFQSPLRTDSRIDILFSNIKNLIFQSCKGELIVVIHIHLK 745
Query: 746 NHIMVGNKKTKDVQFYVEVMDV-VQTLGGGKRSA-----Y-DPDEIEEEQRERARKNKIN 798
N I++G KK +DVQFY E D+ V GGG+R Y D DE+E+EQ ER ++ ++
Sbjct: 746 NPILMGKKKIQDVQFYREASDMSVDETGGGRRGQSRFRRYGDEDELEQEQEERRKRAALD 805
Query: 799 MDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIVPTSSCLVELIETP 858
+F+ F + + + NGL L + RDLGF GVP++++ F +PT+ CLV+LIE P
Sbjct: 806 KEFKYFADAIAEA-----SNGL-LTVENTFRDLGFQGVPNRSAVFCMPTTDCLVQLIEPP 859
Query: 859 FLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXXXXXXKEWLDTTDI 918
FLV+ L E+EI LERV G KNFDM V+KDF K V K+WL DI
Sbjct: 860 FLVINLEEVEICILERVQFGLKNFDMVFVYKDFNKPVTHINTVPIESLDFLKQWLTDMDI 919
Query: 919 KYYESRLNLNWRQILKTITDDPQSFIDDGGWEFXXXXXXXXXXXXXXXXXQGYEPXXXXX 978
Y S +NLNW I+K++ DDP F DGGW F YE
Sbjct: 920 PYTVSTINLNWATIMKSLQDDPYQFFLDGGWNFLATGSDDEASDESEEEVSEYEASEDDV 979
Query: 979 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK-GKTWAELEREATNADR 1027
+ G+ W ELE++A ADR
Sbjct: 980 SDESAFSEDEEGSEVDDDISGDESEDYTGDESEEGEDWDELEKKAARADR 1029
Score = 518 (187.4 bits), Expect = 4.4e-46, Sum P(2) = 4.4e-46
Identities = 155/501 (30%), Positives = 254/501 (50%)
Query: 22 SINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGYEF 81
+I+ + F R++ LYS +N ++ GS + L ++ + Y K++ L+ WLL YEF
Sbjct: 5 NIDFDVFKKRIELLYSKYN----EFEGSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEF 60
Query: 82 PETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVIHVKAKTDDGVELMDAIFNA 141
P T++ + ++ + S KA L KD + + + + + + EL +F+
Sbjct: 61 PATLIALVPGKVIIITSSAKAKHLQKAIDLFKDPE-SKITLELWQRNNKEPELNKKLFDD 119
Query: 142 VRSQSNVDSGDGPIVGSIARETPEGRLLE----TWADRLQNSGFQLSDVTNGLSELFAVK 197
V + N G VG +++ +G+ + W ++ + F + D++ GLS+++ VK
Sbjct: 120 VIALIN---SAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDISLGLSKVWEVK 176
Query: 198 DQEE--IMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAI-------- 247
D E ++V G + M+ ++ ++ +DEE K+T++ L D+ E I
Sbjct: 177 DVNEQAFLSVSSKG--SDKFMD-LLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQ 233
Query: 248 LEPTKAGV-----KLRAENVDICYPPIFQSGGAFDLRPSAAS-NDELLYYDSGSVIICAV 301
L P + + K + +D Y PI QSG FDLR SA S ND+L Y +G I+ +
Sbjct: 234 LSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTNDQL--YGNGC-ILASC 290
Query: 302 GSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAH-EAAIGALKPGNKVSAAYQAALSVVE 360
G RYN+YCSNI R+FLID + + Y+ LL E LKPG Y++ + +E
Sbjct: 291 GIRYNNYCSNITRTFLIDPSEEMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIE 350
Query: 361 REAPELVPNLTKSAGTGIGLEFRESGLNLNAKND-RVVKAKMIFNVSIGFQNLQNQTNKP 419
+ PELVPN TK+ G+ IGLEFR+S LN KND R ++ FN+S GF NL++ +
Sbjct: 351 KTKPELVPNFTKNIGSLIGLEFRDSNFILNVKNDYRKIQRGDCFNISFGFNNLKD-SQSA 409
Query: 420 KNQMFSLLLADTVIV--GENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANGTE 477
N ++L LADTV + E P +KA +++ FN + K ++
Sbjct: 410 NN--YALQLADTVQIPLDETEPPRFLTNYTKAKSQISFYFNNEEEDNNKKK----SSPAT 463
Query: 478 ALPSKTTLRSDNQEISKEELR 498
+PSK N +I + +LR
Sbjct: 464 KVPSKP---DRNSKILRTKLR 481
Score = 47 (21.6 bits), Expect = 4.4e-46, Sum P(2) = 4.4e-46
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 1013 KTWAELEREATNADREKGDDSDSEEERKRRKGKTFGKSR 1051
K A+L++EAT ++E+ +D ++ K + KT G+++
Sbjct: 641 KQIADLKKEATKREQERKALADVVQQDKLIENKT-GRTK 678
Score = 39 (18.8 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 1020 REATNADREKGDDSDSEEERKRRK 1043
R + R GD+ + E+E++ R+
Sbjct: 776 RRGQSRFRRYGDEDELEQEQEERR 799
Score = 37 (18.1 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1022 ATNADREKGDDSDSE 1036
AT +D E D+S+ E
Sbjct: 954 ATGSDDEASDESEEE 968
Score = 37 (18.1 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1023 TNADREKGDDSDSEEERKRR--KGKTF 1047
T + E+G+D D E++ R +G F
Sbjct: 1007 TGDESEEGEDWDELEKKAARADRGANF 1033
>WB|WBGene00018852 [details] [associations]
symbol:F55A3.7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006997 "nucleus organization" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] InterPro:IPR000994 GO:GO:0009792 GO:GO:0018996
GO:GO:0000910 Gene3D:3.90.230.10 GO:GO:0006997 GO:GO:0001703
EMBL:FO080793 eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 RefSeq:NP_492820.3
ProteinModelPortal:Q9N5S0 SMR:Q9N5S0 STRING:Q9N5S0 PaxDb:Q9N5S0
EnsemblMetazoa:F55A3.7 GeneID:186272 KEGG:cel:CELE_F55A3.7
UCSC:F55A3.7 CTD:186272 WormBase:F55A3.7 InParanoid:Q9N5S0
NextBio:931258 Uniprot:Q9N5S0
Length = 450
Score = 238 (88.8 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 65/185 (35%), Positives = 106/185 (57%)
Query: 552 LMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTN 611
++I +D+K ++V+ PI+G VPFH++ I+ S + + Y+RI F PG+ D+
Sbjct: 262 MLIFVDRKYDSVVVPIFGIPVPFHISMIKNCSQSVEGDLT-YLRINFATPGSQVGK-DSG 319
Query: 612 SLKHQGAIYLKEVSFRS---KD-------P-RHIGEVVGAIKTLRRQVMARESERAERAT 660
H A Y+KE +FR+ KD P R++ IK ++++ + E+E+ E+
Sbjct: 320 QFPHPLAHYMKEFTFRASNIKDHHSDSTAPSRNLSTAFRFIKEMQKRFKSEEAEQREKEG 379
Query: 661 LVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIM 720
V Q+KL L+ N+ P KL+ L I P + I G+LEAH NGFR+ TS +R+D++
Sbjct: 380 AVKQDKLILSQNKLNP-KLN-LLICPNI--IQKLITGSLEAHTNGFRY-TSLRGDRIDVL 434
Query: 721 FGNIK 725
+ NIK
Sbjct: 435 YNNIK 439
Score = 207 (77.9 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 60/223 (26%), Positives = 100/223 (44%)
Query: 48 GSADVLAIATPPASEDLRYLKSSALNIWLLGYEFPETVMVFMKKQIQFLCSQKKASLLGM 107
G + ++A D Y K+S L WL G+E +TV++ + I L S +K G
Sbjct: 12 GLDSIKSLAFVYGETDNPYTKTSELFTWLFGHEIADTVLLLLNDHIYILGSNRKVEFFGS 71
Query: 108 VKRSAKDAVGADVVIHV-KAKTDDGVELMDAIFNAVRSQSNVDSGDGPIVGSIARETPEG 166
V + + V + + KTD + + + ++S GD VG+ +E
Sbjct: 72 VTGDNQSSGKVPTVSTLLRDKTDKDAGNFEKLIDHIKSAG----GD---VGNFVKEKFSS 124
Query: 167 RLLETWADRLQNSGFQLSDVTNGLSELFAVKDQEEIMNVKKAGYLTYNVMNKIVVPKLEN 226
+ +W L+ G +DVT + LFAVKD +E+ ++K+ T +E
Sbjct: 125 EFVSSWNKALEEGGVNKNDVTLAFTHLFAVKDDKEMDLIRKSAQATTASWTAARARYVE- 183
Query: 227 VIDEEKKVTHSLLMDEAEKAILEPTKAGVKLRAENVDICYPPI 269
+ D EK+V HS+L ++ A ++ +K L D CY PI
Sbjct: 184 ISDNEKRVRHSVLSNQFA-AFMKDSKVQQALAKYEADTCYDPI 225
>UNIPROTKB|Q3ACM8 [details] [associations]
symbol:CHY_1272 "Putative proline dipeptidase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006508 "proteolysis" evidence=ISS] InterPro:IPR000587
InterPro:IPR000994 Pfam:PF00557 Pfam:PF01321 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0016787
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 eggNOG:COG0006
HOGENOM:HOG000008760 ProtClustDB:CLSK745998 RefSeq:YP_360106.1
ProteinModelPortal:Q3ACM8 STRING:Q3ACM8 GeneID:3726321
KEGG:chy:CHY_1272 PATRIC:21275681 OMA:RIGFERY
BioCyc:CHYD246194:GJCN-1271-MONOMER Uniprot:Q3ACM8
Length = 367
Score = 158 (60.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 54/214 (25%), Positives = 96/214 (44%)
Query: 239 LMDEAEKAILEPTKAGVKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVII 298
++ EAE A+L+ G+ R P I P A++ +L+ + G V++
Sbjct: 175 VLAEAEYAMLKAGSNGLPFR--------PQIVSGNRCLLTHPHAST--KLI--EEGEVVV 222
Query: 299 CAVGSRYNSYCSNIARSFLI-DATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALS 357
+G+ YN YC+ + R+ + + + KV+ +LL+A E AI AL+PG+K +AA
Sbjct: 223 VHLGATYNGYCAKMCRTVAVGEISAAHEKVFNLLLEAQEKAIAALRPGSKAWEVDEAARE 282
Query: 358 VVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTN 417
V+ R E G G+GL E + +++ M+ ++ +
Sbjct: 283 VIRRAGFE--EYYLDVIGYGVGLRQSEFYPIIGKGRQDIIEVGMVVDLLLP-TIYHRDVG 339
Query: 418 KPKNQMFSLLLADTVIVGENNPEVVTCKSSKAVK 451
P+ + D + VGEN E++T K +K
Sbjct: 340 GPR-------ITDVIYVGENENEILTGYPRKLIK 366
>TIGR_CMR|CHY_1272 [details] [associations]
symbol:CHY_1272 "putative proline dipeptidase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006508 "proteolysis" evidence=ISS] InterPro:IPR000587
InterPro:IPR000994 Pfam:PF00557 Pfam:PF01321 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0016787
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 eggNOG:COG0006
HOGENOM:HOG000008760 ProtClustDB:CLSK745998 RefSeq:YP_360106.1
ProteinModelPortal:Q3ACM8 STRING:Q3ACM8 GeneID:3726321
KEGG:chy:CHY_1272 PATRIC:21275681 OMA:RIGFERY
BioCyc:CHYD246194:GJCN-1271-MONOMER Uniprot:Q3ACM8
Length = 367
Score = 158 (60.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 54/214 (25%), Positives = 96/214 (44%)
Query: 239 LMDEAEKAILEPTKAGVKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVII 298
++ EAE A+L+ G+ R P I P A++ +L+ + G V++
Sbjct: 175 VLAEAEYAMLKAGSNGLPFR--------PQIVSGNRCLLTHPHAST--KLI--EEGEVVV 222
Query: 299 CAVGSRYNSYCSNIARSFLI-DATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALS 357
+G+ YN YC+ + R+ + + + KV+ +LL+A E AI AL+PG+K +AA
Sbjct: 223 VHLGATYNGYCAKMCRTVAVGEISAAHEKVFNLLLEAQEKAIAALRPGSKAWEVDEAARE 282
Query: 358 VVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTN 417
V+ R E G G+GL E + +++ M+ ++ +
Sbjct: 283 VIRRAGFE--EYYLDVIGYGVGLRQSEFYPIIGKGRQDIIEVGMVVDLLLP-TIYHRDVG 339
Query: 418 KPKNQMFSLLLADTVIVGENNPEVVTCKSSKAVK 451
P+ + D + VGEN E++T K +K
Sbjct: 340 GPR-------ITDVIYVGENENEILTGYPRKLIK 366
>UNIPROTKB|Q3AAZ1 [details] [associations]
symbol:pepP "Aminopeptidase P" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] InterPro:IPR000587 InterPro:IPR000994
InterPro:IPR001714 Pfam:PF00557 Pfam:PF01321 PRINTS:PR00599
Prosite:PS00491 InterPro:IPR001131 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0004177 GO:GO:0008233
GO:GO:0008235 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987
KO:K01262 eggNOG:COG0006 HOGENOM:HOG000008760 RefSeq:YP_360693.1
ProteinModelPortal:Q3AAZ1 STRING:Q3AAZ1 MEROPS:M24.008
GeneID:3728643 KEGG:chy:CHY_1873 PATRIC:21276841 OMA:HCLRQMA
BioCyc:CHYD246194:GJCN-1872-MONOMER Uniprot:Q3AAZ1
Length = 354
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 70/271 (25%), Positives = 124/271 (45%)
Query: 182 QLSDVTNGLSELFAVKDQEEIMNVKKAGYLTYNVMNK---IVVPKLENVIDEEKKVTHSL 238
+LS+ +G++ + + +E+ +K G + V+ K I +++ KK+T
Sbjct: 105 ELSEKASGVNLVSLPEIVDELREIKDKGEV--EVIKKACAIADAAFNHLL---KKLTPG- 158
Query: 239 LMDEAEKAILEPTKAGVKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVII 298
M E E A E K + AE DI + I SG L AS +++ SG ++
Sbjct: 159 -MSEKEVA-WELEKFMREAGAE--DIAFETIVASGERGALPHGVASEKKIV---SGEMVT 211
Query: 299 CAVGSRYNSYCSNIARSFLI-DATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALS 357
G++Y Y S+I R+ I + + ++Y+V+L+A EAA+ A++PG + A
Sbjct: 212 LDFGAKYQGYHSDITRTVAIGEPSEKMLEIYDVVLEAQEAALQAVRPGALAVDVDRVARD 271
Query: 358 VVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTN 417
++ + G G+GL E G L+ K V++ M+ + G
Sbjct: 272 IIAKAG--YAEYFGHGLGHGVGLNIHE-GPRLSPKGKAVLQPGMVVTIEPGIY------- 321
Query: 418 KPKNQMFSLLLADTVIVGENNPEVVTCKSSK 448
P + + + DTV+V E+ EV+T +S K
Sbjct: 322 LPGSG--GVRIEDTVLVTESGFEVLT-RSPK 349
>TIGR_CMR|CHY_1873 [details] [associations]
symbol:CHY_1873 "aminopeptidase P" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] InterPro:IPR000587 InterPro:IPR000994
InterPro:IPR001714 Pfam:PF00557 Pfam:PF01321 PRINTS:PR00599
Prosite:PS00491 InterPro:IPR001131 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0004177 GO:GO:0008233
GO:GO:0008235 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987
KO:K01262 eggNOG:COG0006 HOGENOM:HOG000008760 RefSeq:YP_360693.1
ProteinModelPortal:Q3AAZ1 STRING:Q3AAZ1 MEROPS:M24.008
GeneID:3728643 KEGG:chy:CHY_1873 PATRIC:21276841 OMA:HCLRQMA
BioCyc:CHYD246194:GJCN-1872-MONOMER Uniprot:Q3AAZ1
Length = 354
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 70/271 (25%), Positives = 124/271 (45%)
Query: 182 QLSDVTNGLSELFAVKDQEEIMNVKKAGYLTYNVMNK---IVVPKLENVIDEEKKVTHSL 238
+LS+ +G++ + + +E+ +K G + V+ K I +++ KK+T
Sbjct: 105 ELSEKASGVNLVSLPEIVDELREIKDKGEV--EVIKKACAIADAAFNHLL---KKLTPG- 158
Query: 239 LMDEAEKAILEPTKAGVKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVII 298
M E E A E K + AE DI + I SG L AS +++ SG ++
Sbjct: 159 -MSEKEVA-WELEKFMREAGAE--DIAFETIVASGERGALPHGVASEKKIV---SGEMVT 211
Query: 299 CAVGSRYNSYCSNIARSFLI-DATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALS 357
G++Y Y S+I R+ I + + ++Y+V+L+A EAA+ A++PG + A
Sbjct: 212 LDFGAKYQGYHSDITRTVAIGEPSEKMLEIYDVVLEAQEAALQAVRPGALAVDVDRVARD 271
Query: 358 VVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTN 417
++ + G G+GL E G L+ K V++ M+ + G
Sbjct: 272 IIAKAG--YAEYFGHGLGHGVGLNIHE-GPRLSPKGKAVLQPGMVVTIEPGIY------- 321
Query: 418 KPKNQMFSLLLADTVIVGENNPEVVTCKSSK 448
P + + + DTV+V E+ EV+T +S K
Sbjct: 322 LPGSG--GVRIEDTVLVTESGFEVLT-RSPK 349
>DICTYBASE|DDB_G0282075 [details] [associations]
symbol:xpnpep3 "peptidase M24 family protein"
species:44689 "Dictyostelium discoideum" [GO:0030145 "manganese ion
binding" evidence=IEA] [GO:0009987 "cellular process" evidence=IEA]
[GO:0004177 "aminopeptidase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR000994 InterPro:IPR007865
Pfam:PF00557 Pfam:PF05195 SMART:SM01011 dictyBase:DDB_G0282075
GenomeReviews:CM000152_GR GO:GO:0006508 GO:GO:0008237 GO:GO:0004177
GO:GO:0030145 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987
KO:K01262 eggNOG:COG0006 OMA:VRAMQAC EMBL:AAFI02000044
MEROPS:M24.026 HSSP:P81535 RefSeq:XP_640405.1
ProteinModelPortal:Q54T46 EnsemblProtists:DDB0304432 GeneID:8623360
KEGG:ddi:DDB_G0282075 ProtClustDB:CLSZ2430502 Uniprot:Q54T46
Length = 518
Score = 136 (52.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 72/332 (21%), Positives = 142/332 (42%)
Query: 147 NVDSGDGPIVGSIARETPEGRLL-ET--WADRLQNS------GFQLSDVTNGLSELFAVK 197
N+ + D PI+G + + T +G+L T W ++L N + V + L ++ +K
Sbjct: 191 NLTNRDIPILGKLLKSTTDGKLYCNTTPW-NQLSNKLEPFLENIKFYTVESLLQQIRLIK 249
Query: 198 DQEEIMNVKKAGYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDEAEKAILEPTKAGVKL 257
EI + K+G + ++ + + S L + A E VK
Sbjct: 250 SDAEIKMMLKSGEIAGTSFHETMKYTGTKSSSSSSSSSSSPLNEYQVSAYFEWC---VKD 306
Query: 258 RAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSFL 317
+ + YPP+ +GG N++LL Y +++ G Y Y S+I R+F
Sbjct: 307 KGAQ-RMSYPPVV-AGGDNGHTLHYIQNNQLLNYCD--LLLMDAGCEYWGYTSDITRTFP 362
Query: 318 IDA--TPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELV------PN 369
+ T QS+VY+ +L ++ I KPG +++ + ++ +++ L PN
Sbjct: 363 VSGKFTEAQSEVYQAVLDVNKKCIELCKPGETINSIHLKSVELIQAHLKRLGIINESNPN 422
Query: 370 -----LTKSAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIGFQNLQNQTNKP-KNQM 423
S G +G++ ++ L+ ++ MI + G + +N P K +
Sbjct: 423 DYRLYYPHSIGHYLGMDTHDT---LDFDYGVTLEPGMIITIEPGIYISKYDSNVPEKYRG 479
Query: 424 FSLLLADTVIVGE--NNPEVVTCKSSKAVKDV 453
S+ + D V++ N+P V+T + K + ++
Sbjct: 480 ISIRVEDDVVIPNLNNSPLVLTHLAPKEISEI 511
Score = 49 (22.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 52 VLAIATPPA---SEDLRYLKSSALNI-WLLGYEFPETVMVFMK 90
V+ I TPP S D+ + N +L G+ PE V+V +K
Sbjct: 106 VVVIFTPPEPMMSYDIPWSFRQNTNFNYLTGFNEPEAVLVLVK 148
>RGD|1589063 [details] [associations]
symbol:Xpnpep3 "X-prolyl aminopeptidase (aminopeptidase P) 3,
putative" species:10116 "Rattus norvegicus" [GO:0003094 "glomerular
filtration" evidence=IEA;ISO] [GO:0004177 "aminopeptidase activity"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0009987 "cellular process" evidence=IEA] [GO:0016485 "protein
processing" evidence=IEA;ISO] [GO:0030145 "manganese ion binding"
evidence=IEA] InterPro:IPR000994 InterPro:IPR007865 Pfam:PF00557
Pfam:PF05195 SMART:SM01011 RGD:1589063 GO:GO:0005739 GO:GO:0004177
GO:GO:0030145 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987
KO:K01262 eggNOG:COG0006 HOGENOM:HOG000008762 MEROPS:M24.026
CTD:63929 HOVERGEN:HBG057305 OrthoDB:EOG4KPT9J EMBL:BC168759
IPI:IPI00361438 RefSeq:NP_001124054.2 UniGene:Rn.224672
ProteinModelPortal:B5DEQ3 STRING:B5DEQ3 PhosphoSite:B5DEQ3
GeneID:685823 KEGG:rno:685823 UCSC:RGD:1589063 NextBio:730541
Genevestigator:B5DEQ3 Uniprot:B5DEQ3
Length = 506
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 82/386 (21%), Positives = 161/386 (41%)
Query: 95 FLCS-QKKASLLGMVKRSAKDAVGADVVIHVKAKTDDGVELMDAIFNAVRSQSNVDSGDG 153
+LC Q+ S+L + S K ++ V + D G EL D + + D
Sbjct: 123 YLCGFQEPDSILVLQSCSGKQLPSHKAMLFVPRR-DPGRELWDGPRSGTDGAIALTGVDD 181
Query: 154 PI-VGSIARETPEGRLLET---WADRLQNSGFQL-SDVTNGLSELFAVKDQEEIMNVKKA 208
+ P+ R ET W D ++ S QL SD L+E A + V+
Sbjct: 182 AYPLEEFQHLLPKLRA-ETNMVWYDWMKPSHAQLHSDYMQPLTEAKATSKNK----VRSV 236
Query: 209 GYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDE--AEKAILEPT----KAGVKLRAENV 262
+L + + I P + K+T ++ A KA ++ K + RA
Sbjct: 237 QHLIQH-LRLIKSPAEIKRMQIAGKLTSEAFIETMFASKAPVDEAFLYAKFEFECRARGA 295
Query: 263 DI-CYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSFLIDA- 320
DI YPP+ +GG N++L+ G +++ G + Y S+I R++ ++
Sbjct: 296 DILAYPPVV-AGGNRSNTLHYVKNNQLI--KDGEMVLLDGGCESSCYVSDITRTWPVNGR 352
Query: 321 -TPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPEL-VPNLTKSAGTGI 378
T Q+++YE +L+ +A + PG + Y L+++ ++ +L + +K +
Sbjct: 353 FTAPQAELYEAVLEIQKACLTLCSPGTSLENIYSMMLTLMGQKLKDLGIIKTSKESAFKA 412
Query: 379 GLEF------RESGLNLNAKNDRV----VKAKMIFNVSIGFQNLQNQTNKP-KNQMFSLL 427
++ G++++ D ++ M+ V G + T+ P K + +
Sbjct: 413 ARKYCPHHVGHYLGMDVHDTPDMPRSLPLQPGMVITVEPGIYIPEGDTDAPEKFRGLGVR 472
Query: 428 LADTVIVGENNPEVVTCKSSKAVKDV 453
+ D V+V +++P +++ K V D+
Sbjct: 473 IEDDVVVTQDSPLILSADCPKEVNDI 498
>UNIPROTKB|G3V9W4 [details] [associations]
symbol:Xpnpep3 "Probable Xaa-Pro aminopeptidase 3"
species:10116 "Rattus norvegicus" [GO:0004177 "aminopeptidase
activity" evidence=IEA] [GO:0009987 "cellular process"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
InterPro:IPR000994 InterPro:IPR007865 Pfam:PF00557 Pfam:PF05195
SMART:SM01011 RGD:1589063 GO:GO:0004177 GO:GO:0030145
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 EMBL:CH473950
MEROPS:M24.026 GeneTree:ENSGT00550000074909 UniGene:Rn.224672
Ensembl:ENSRNOT00000068666 Uniprot:G3V9W4
Length = 506
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 82/386 (21%), Positives = 161/386 (41%)
Query: 95 FLCS-QKKASLLGMVKRSAKDAVGADVVIHVKAKTDDGVELMDAIFNAVRSQSNVDSGDG 153
+LC Q+ S+L + S K ++ V + D G EL D + + D
Sbjct: 123 YLCGFQEPDSILVLQSCSGKQLPSHKAMLFVPRR-DPGRELWDGPRSGTDGAIALTGVDD 181
Query: 154 PI-VGSIARETPEGRLLET---WADRLQNSGFQL-SDVTNGLSELFAVKDQEEIMNVKKA 208
+ P+ R ET W D ++ S QL SD L+E A + V+
Sbjct: 182 AYPLEEFQHLLPKLRA-ETNMVWYDWMKPSHAQLHSDYMQPLTEAKATSKNK----VRSV 236
Query: 209 GYLTYNVMNKIVVPKLENVIDEEKKVTHSLLMDE--AEKAILEPT----KAGVKLRAENV 262
+L + + I P + K+T ++ A KA ++ K + RA
Sbjct: 237 QHLIQH-LRLIKSPAEIKRMQIAGKLTSEAFIETMFASKAPVDEAFLYAKFEFECRARGA 295
Query: 263 DI-CYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSFLIDA- 320
DI YPP+ +GG N++L+ G +++ G + Y S+I R++ ++
Sbjct: 296 DILAYPPVV-AGGNRSNTLHYVKNNQLI--KDGEMVLLDGGCESSCYVSDITRTWPVNGR 352
Query: 321 -TPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPEL-VPNLTKSAGTGI 378
T Q+++YE +L+ +A + PG + Y L+++ ++ +L + +K +
Sbjct: 353 FTAPQAELYEAVLEIQKACLTLCSPGTSLENIYSMMLTLMGQKLKDLGIIKTSKESAFKA 412
Query: 379 GLEF------RESGLNLNAKNDRV----VKAKMIFNVSIGFQNLQNQTNKP-KNQMFSLL 427
++ G++++ D ++ M+ V G + T+ P K + +
Sbjct: 413 ARKYCPHHVGHYLGMDVHDTPDMPRSLPLQPGMVITVEPGIYIPEGDTDAPEKFRGLGVR 472
Query: 428 LADTVIVGENNPEVVTCKSSKAVKDV 453
+ D V+V +++P +++ K V D+
Sbjct: 473 IEDDVVVTQDSPLILSADCPKEVNDI 498
>MGI|MGI:2445217 [details] [associations]
symbol:Xpnpep3 "X-prolyl aminopeptidase (aminopeptidase P)
3, putative" species:10090 "Mus musculus" [GO:0003094 "glomerular
filtration" evidence=ISO] [GO:0004177 "aminopeptidase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO;IDA]
[GO:0009987 "cellular process" evidence=IEA] [GO:0016485 "protein
processing" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000994
InterPro:IPR007865 Pfam:PF00557 Pfam:PF05195 SMART:SM01011
MGI:MGI:2445217 GO:GO:0005739 GO:GO:0004177 GO:GO:0030145
EMBL:CH466550 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987
KO:K01262 eggNOG:COG0006 HOGENOM:HOG000008762 MEROPS:M24.026
GeneTree:ENSGT00550000074909 CTD:63929 HOVERGEN:HBG057305
EMBL:AK088324 EMBL:BC137569 EMBL:BC144717 IPI:IPI00221972
IPI:IPI00923106 RefSeq:NP_796284.1 UniGene:Mm.390833
ProteinModelPortal:B7ZMP1 SMR:B7ZMP1 STRING:B7ZMP1 PaxDb:B7ZMP1
PRIDE:B7ZMP1 Ensembl:ENSMUST00000041609 Ensembl:ENSMUST00000163754
GeneID:321003 KEGG:mmu:321003 UCSC:uc011zwj.1 InParanoid:Q8BHT9
OMA:KEVKHIE OrthoDB:EOG4KPT9J NextBio:397845 Bgee:B7ZMP1
Genevestigator:B7ZMP1 Uniprot:B7ZMP1
Length = 506
Score = 124 (48.7 bits), Expect = 0.00043, P = 0.00043
Identities = 77/384 (20%), Positives = 165/384 (42%)
Query: 95 FLCS-QKKASLLGMVKRSAKDAVGADVVIHVKAKTDDGVELMDAIFNAVRSQSNVDSGDG 153
+LC Q+ S+L + S K ++ V + D G EL D + + D
Sbjct: 123 YLCGFQEPDSILVLQSFSGKQLPSHKAMLFVPRR-DPGRELWDGPRSGTDGAIALTGVDE 181
Query: 154 PI-VGSIARETPEGRLLET---WADRLQNSGFQL-SDVTNGLSELFAVKDQEEIMNVKKA 208
+ P+ R ET W D ++ S QL SD L+E A + + ++ +V++
Sbjct: 182 AYPLEEFQHLLPKLRA-ETNMVWYDWMKPSHAQLHSDYMQPLTEAKA-RSKNKVRSVQQL 239
Query: 209 GYLTYNVMNKIVVPKLE--NVIDEEKKVTHSLLMDEA--EKAILEPTKAGVKLRAENVDI 264
V + + +++ + E + ++ +A ++A L K + RA DI
Sbjct: 240 IQRLRLVKSPSEIKRMQIAGKLTSEAFI-ETMFASKAPIDEAFLY-AKFEFECRARGADI 297
Query: 265 -CYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSFLIDA--T 321
YPP+ +GG N++L+ G +++ G + Y S+I R++ ++ T
Sbjct: 298 LAYPPVV-AGGNRSNTLHYVKNNQLI--KDGEMVLLDGGCESSCYVSDITRTWPVNGRFT 354
Query: 322 PLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPEL-VPNLTKSAGTGIGL 380
Q+++YE +L+ A + PG + Y L+++ ++ +L + +K +
Sbjct: 355 APQAELYEAVLEIQRACLTLCSPGTSLENIYSMMLTLIGQKLKDLGITKTSKESAFKAAR 414
Query: 381 EF------RESGLNLNAKNDRV----VKAKMIFNVSIGFQNLQNQTNKP-KNQMFSLLLA 429
++ G++++ D ++ M+ V G ++ + P K + + +
Sbjct: 415 KYCPHHVGHYLGMDVHDTPDMPRSLPLQPGMVITVEPGIYIPEDDRDAPEKFRGLGVRIE 474
Query: 430 DTVIVGENNPEVVTCKSSKAVKDV 453
D V+V +++P +++ K + D+
Sbjct: 475 DDVVVTQDSPLILSADCPKEMNDI 498
>TIGR_CMR|GSU_2021 [details] [associations]
symbol:GSU_2021 "xaa-pro dipeptidase" species:243231
"Geobacter sulfurreducens PCA" [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR000587 InterPro:IPR000994
InterPro:IPR001714 Pfam:PF00557 Pfam:PF01321 PRINTS:PR00599
Prosite:PS00491 InterPro:IPR001131 GO:GO:0006508 GO:GO:0004177
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008235
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 HSSP:P15034
KO:K01271 HOGENOM:HOG000008760 MEROPS:M24.008 RefSeq:NP_953070.1
ProteinModelPortal:Q74BM0 DNASU:2688032 GeneID:2688032
KEGG:gsu:GSU2021 PATRIC:22026903 OMA:SWAHGVA ProtClustDB:CLSK828688
BioCyc:GSUL243231:GH27-2055-MONOMER Uniprot:Q74BM0
Length = 355
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 43/168 (25%), Positives = 77/168 (45%)
Query: 242 EAEKAILEPTKAGVKLRAENVDICYPPIFQSGGAFDLRPSAASNDELLYYDSGSVIICAV 301
E E A LE A + AEN + I SG L P ++D+ L +G ++
Sbjct: 162 ERELA-LELEFAMRRAGAENASFDF--IVASGERGSL-PHGRASDKALA--AGELVTIDF 215
Query: 302 GSRYNSYCSNIARSFLIDATP-LQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVE 360
G+RY YCS+ + + Q ++Y ++ +AH+ AI A++PG ++ + A +E
Sbjct: 216 GARYEGYCSDETVTVAVGVPDERQCQIYGIVKEAHDRAIAAVRPGAELREIDRIARGYIE 275
Query: 361 REAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVVKAKMIFNVSIG 408
+ G G+GL+ E + ++ + + V M+F + G
Sbjct: 276 EQGYGAF--FGHGLGHGVGLDVHEKPV-VSPRGEGVAAVGMVFTIEPG 320
>TIGR_CMR|DET_0715 [details] [associations]
symbol:DET_0715 "metallopeptidase, M24 family"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008235 "metalloexopeptidase
activity" evidence=ISS] InterPro:IPR000587 InterPro:IPR000994
Pfam:PF00557 Pfam:PF01321 Prosite:PS00491 InterPro:IPR001131
GO:GO:0046872 GO:GO:0016787 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 eggNOG:COG0006
HOGENOM:HOG000008760 RefSeq:YP_181456.1 ProteinModelPortal:Q3Z8J3
STRING:Q3Z8J3 GeneID:3229936 KEGG:det:DET0715 PATRIC:21608493
OMA:DDYCSDQ ProtClustDB:CLSK837313
BioCyc:DETH243164:GJNF-716-MONOMER Uniprot:Q3Z8J3
Length = 362
Score = 119 (46.9 bits), Expect = 0.00088, P = 0.00088
Identities = 36/141 (25%), Positives = 66/141 (46%)
Query: 269 IFQSGGAFDLRPSAASNDELLYYDSGSVIICAVGSRYNSYCSNIARSFLIDATPLQ-SKV 327
+ + GA P A + + Y G ++ G++ N Y S++ R+ L Q K+
Sbjct: 192 VIAATGANSALPHARTRPAAVVY--GQPLLMDYGAKVNWYASDMTRTVLQGKADSQFKKI 249
Query: 328 YEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGL 387
Y+++L A + AI + G A A V+E+ N S G G+GLE E+
Sbjct: 250 YDIVLAAQQKAIDQITSGMTGQEADTIARDVIEKAG--YGANFGHSLGHGVGLEVHEAP- 306
Query: 388 NLNAKNDRVVKAKMIFNVSIG 408
L+ ++ +++ M+F++ G
Sbjct: 307 RLSPRSTDILEDGMVFSIEPG 327
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1065 974 0.00097 122 3 11 22 0.42 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 626 (67 KB)
Total size of DFA: 437 KB (2209 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 89.86u 0.13s 89.99t Elapsed: 00:00:04
Total cpu time: 89.88u 0.13s 90.01t Elapsed: 00:00:04
Start: Mon May 20 20:08:20 2013 End: Mon May 20 20:08:24 2013