Query 001505
Match_columns 1065
No_of_seqs 426 out of 3932
Neff 7.1
Searched_HMMs 29240
Date Tue Mar 26 16:15:42 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001505.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_807-811//hhsearch_pdb/001505hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 958.2 78.4 815 221-1049 1-918 (1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 769.9 71.9 767 271-1048 44-875 (1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 685.4 54.5 541 272-822 749-1317(1321)
4 4a82_A Cystic fibrosis transme 1.0 1 1 663.7 62.5 546 266-821 5-576 (578)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 658.6 61.3 541 269-823 31-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 653.9 68.0 545 263-822 11-579 (587)
7 3b60_A Lipid A export ATP-bind 1.0 1 1 629.1 68.5 539 267-821 17-579 (582)
8 3b5x_A Lipid A export ATP-bind 1.0 1 1 627.8 73.3 540 266-821 16-579 (582)
9 2yl4_A ATP-binding cassette SU 1.0 1 1 626.8 67.1 545 267-821 11-583 (595)
10 3g5u_A MCG1178, multidrug resi 1.0 1 1 585.6 56.9 544 271-823 701-1272(1284)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=958.21 Aligned_cols=815 Identities=17% Similarity=0.175 Sum_probs=590.5
Q ss_pred HHHHHC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC---------------CCCHHHHHHHH---H-HHHHHHH
Q ss_conf 999511-49888888999998995899999999999861058---------------99807999999---8-9999999
Q 001505 221 LFQRGR-IQKLELLHIPPIPQSETANDASSLLEESLRKQKTD---------------ATSLPQVIIHA---V-WKSLALN 280 (1065)
Q Consensus 221 l~~~G~-~~~L~~~Dl~~l~~~~~a~~~~~~f~~~~~~~~~~---------------~~~l~~~l~~~---~-~~~~~~~ 280 (1065)
|++.|. |++|+..|.+++.|+|..+...+.+++.|.....+ ++.-++.+++. + +..++++
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf 98773100687635445679501110000113454243554334310012232025687799997315676789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-------C-C-------CCCC--HH-----HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999998559-------9-8-------8750--47-----99999999999999999999999
Q 001505 281 AAFAGVNTIASYIGPFLITNFVSFLSG-------K-H-------DHSS--YH-----YGLVLASVFLFAKTVESLTQRQW 338 (1065)
Q Consensus 281 ~~~~li~~~~~~~~P~ll~~li~~~~~-------~-~-------~~~~--~~-----~g~~l~~~l~~~~lv~~l~~~~~ 338 (1065)
.+++++..+...+.++++..+++...+ . . .... .. ..+.++...+...++..+....+
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999997334568---98867999999965999999999-999999799999999999979856
Q 001505 339 YFGANRIGIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLG 414 (1065)
Q Consensus 339 ~~~~~~~g~~ir~~l~~~iy~K~L~ls~~---~~~~Geiin~is~D~~~i~~~~~-~~~~~w~~plqi~ial~lL~~~lg 414 (1065)
..+|.|+...++..+|+|.++++.. .+++|+++|++++|++++.+++. .+..++..+++++.++++++. +.
T Consensus 161 ----~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~-~~ 235 (1321)
T 4f4c_A 161 ----LYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFT-HS 235 (1321)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHH-HC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_conf ----9999999999999999999788989987998489999999999999999999999999999999999999999-98
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68999999999999999999999999999999999999999999998107999984509999999999999999999999
Q 001505 415 AAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKY 494 (1065)
Q Consensus 415 ~~~~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~ 494 (1065)
|..+++.++.+++.+++...+.++..+..++.++..+++.+.++|.++|||+||+|+||+.+.+++.+..++..+...+.
T Consensus 236 ~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 315 (1321)
T 4f4c_A 236 WQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLK 315 (1321)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999839999982142999999999999999999999
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999--997999999999998834886788899999999999999989999999999999999999999613
Q 001505 495 LYTCSAIAFLFW--ASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKE 572 (1065)
Q Consensus 495 ~~~~~~~~~~~~--~~p~lv~~~~f~~~~l~~~~Lt~~~vft~l~lf~~l~~pl~~lp~~i~~~~qa~vS~~RI~~fL~~ 572 (1065)
....+....... .....+.++++|.+.+.++.+++|.+++++.++..+..|+..++..+..+.++.+|++||.++++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 395 (1321)
T 4f4c_A 316 GLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDR 395 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999995998699999999999999999998999999999999999999999717
Q ss_pred CCCC-CC-CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCC
Q ss_conf 4899-99-88889889983089862279842654446788533357-757408919999879999947899887086557
Q 001505 573 DNQK-KP-ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPR 649 (1065)
Q Consensus 573 ~e~~-~~-~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~Ge~vaIvG~~GSGKSTLL~~llGe~~~ 649 (1065)
++.. +. .......+.++.|+++|++|+||.. ++.++|+| ||+|++|+++||||++|||||||+++|+|+|+|
T Consensus 396 ~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~-----~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~ 470 (1321)
T 4f4c_A 396 KPVIDSSSKAGRKDMKIKGDITVENVHFTYPSR-----PDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDV 470 (1321)
T ss_dssp SCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSS-----TTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC-----CCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCC
T ss_conf 853456665565677888767999855407999-----987433331886228827899805898577888875456516
Q ss_pred CCCCEEEECC-------------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHHCCCCCCCCC
Q ss_conf 8885789879-------------6899926887888868899863943-5468899999981001799740189973005
Q 001505 650 ISGAAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVG 715 (1065)
Q Consensus 650 ~~G~i~~i~g-------------~iayv~Q~pwI~~gTIreNIlfG~~-~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IG 715 (1065)
.+|+| .++| +++||+|+|||||+||||||+||+| .+++++.++++.|++++|++.||+||+|+||
T Consensus 471 ~~G~I-~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vG 549 (1321)
T 4f4c_A 471 LKGKI-TIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVG 549 (1321)
T ss_dssp SEEEE-EETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEES
T ss_pred CCCCC-CCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEEC
T ss_conf 44861-57996501125999850466658753320786167886415522099999999875654688708888860755
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECC
Q ss_conf 88887798899999999998049989998087789997689999999996522996899981794213008889999499
Q 001505 716 ERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDG 795 (1065)
Q Consensus 716 E~G~nLSGGQKQRIsLARAly~~adIlLLDDp~SAlDa~t~~~if~~~i~~~l~~kTvIlVTH~l~~l~~aD~Iivl~~G 795 (1065)
|+|.||||||||||+||||+|+||+||||||||||||++++ +++++++.+++++||+|+||||+++++.||+|++|++|
T Consensus 550 e~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te-~~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G 628 (1321)
T 4f4c_A 550 DRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESE-GIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNG 628 (1321)
T ss_dssp SSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTH-HHHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETT
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH-HHHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECC
T ss_conf 89887777787999999987259998998455446887899-99999999984798899973638789868989996399
Q ss_pred EEEEECCHHHHHHHCCHHHHHHHHHHHHCCC-----CCCCCCCCCCCC----CC----CCCCCCHHHHHCCC-CCCCCCC
Q ss_conf 7989049778984022689999997220036-----899988664345----68----66664100110048-8877878
Q 001505 796 KIEQSGKYEDLIADQNSELVRQMKAHRKSLD-----QVNPPQEDKCLS----RV----PCQMSQITEERFAR-PISCGEF 861 (1065)
Q Consensus 796 ~I~~~G~~~eLl~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~-~~~~~~~ 861 (1065)
+|+|+|+|+||++ +++.|.+++..+..... +.+...+..... .. +..+......+... .......
T Consensus 629 ~ive~Gth~eL~~-~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1321)
T 4f4c_A 629 QVVEVGDHRALMA-QQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITN 707 (1321)
T ss_dssp EEEEEECHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCC------------------------------------------
T ss_pred EEECCCCHHHHHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 6513689999998-532799999962212222332334433223211122222342222222110221110132124567
Q ss_pred CCCCCCHHHHCCCCCH---------------HHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHCHHHHHEE----ECCC-
Q ss_conf 9998200111285247---------------9999999994102689-99999999999997301233011----1254-
Q 001505 862 SGRSQDEDTELGRVKW---------------TVYSAFITLVYKGALV-PVILLCQVLFQALQMGSNYWIAW----ATDE- 920 (1065)
Q Consensus 862 ~~l~~~E~r~~G~V~~---------------~vY~~Y~~~~~g~~~~-~~~~~~~~~~~~~~i~s~~WL~~----~~~~- 920 (1065)
....++|+++.|.+++ .+|+.|... .+.+.. .+.+++.++.........+|+++ +..+
T Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 786 (1321)
T 4f4c_A 708 GPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHA-RPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNP 786 (1321)
T ss_dssp --------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHT-GGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCS
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 7402577753154038999999997078631099999998-778999999999999999999999999999998751793
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHHCHHHH
Q ss_conf -577781279999999999999999999999999999999999999999988395433223--67348897863267899
Q 001505 921 -KRKVSREQLIGVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFDS--TPSSRILNRCSTDQSTV 997 (1065)
Q Consensus 921 -~~~~~~~~~l~vY~~l~~~~~~~~~~r~~~~~~~~~~as~~Lh~~ll~~ilraPmsFFD~--tP~GrILNRfS~D~~~v 997 (1065)
+......+|..+|++++++..++.+++.+++...+.++++++|.+++++++++||+|||+ ||+|||+|||++|++.+
T Consensus 787 ~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i 866 (1321)
T 4f4c_A 787 ADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNL 866 (1321)
T ss_dssp STTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHH
T ss_conf 45566789999999999999999999999999999999999999999888734993332167888488885025059999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8478999999999999999999999988779999999999999999999885
Q 001505 998 DTDIPYRLAGLAFALIQLLSIIILMSQAAWQVFPLFLVILGISIWYQARKLS 1049 (1065)
Q Consensus 998 D~~lp~~l~~~~~~~~~~l~~i~v~~~~~~~~~~~~ipl~~~~~~~q~~Y~~ 1049 (1065)
|..++..+..++..++.+++.++++....|++.+++++++.++++.+.++..
T Consensus 867 ~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~ 918 (1321)
T 4f4c_A 867 RTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGR 918 (1321)
T ss_dssp HTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999865377770221378689999999988899999999999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=769.92 Aligned_cols=767 Identities=16% Similarity=0.169 Sum_probs=541.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------CCC---------CH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 998999999999999999999999999999999855998-------875---------04-7999999999999999999
Q 001505 271 HAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKH-------DHS---------SY-HYGLVLASVFLFAKTVESL 333 (1065)
Q Consensus 271 ~~~~~~~~~~~~~~li~~~~~~~~P~ll~~li~~~~~~~-------~~~---------~~-~~g~~l~~~l~~~~lv~~l 333 (1065)
+..|..+++..++.++..+.....|++++.++|...... ... .. .....++..++...++..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1284)
T 3g5u_A 44 WLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLI 123 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999998613444332222221111100244688999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999997334568---988679999999659999999999-999997999999999999
Q 001505 334 TQRQWYFGANRIGIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVIL 409 (1065)
Q Consensus 334 ~~~~~~~~~~~~g~~ir~~l~~~iy~K~L~ls~~---~~~~Geiin~is~D~~~i~~~~~~-~~~~w~~plqi~ial~lL 409 (1065)
......+...+.+.++...++..+|+|.++++.. .+++|+++|++++|++.+.+.+.. +..+....+.++.+++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~ 203 (1284)
T 3g5u_A 124 VAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIG 203 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999998699899756887789999998899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 79856689999999999999999999999999999999999999999999981079999845099999999999999999
Q 001505 410 YKNLGAAPAFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERD 489 (1065)
Q Consensus 410 ~~~lg~~~~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~ 489 (1065)
+. +.|..+++.++.++++..+...+.+...+..++.++..++......|.++|+++||.|++|+.+.+++.+..+.-.+
T Consensus 204 ~~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~ 282 (1284)
T 3g5u_A 204 FT-RGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKR 282 (1284)
T ss_dssp HH-TTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99-98999999999999999999999999999999999999999999999997879999846539999999999999999
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999--999979999999999988348867888999999999999999899999999999999999999
Q 001505 490 SLKKYLYTCSAIAFL--FWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQ 567 (1065)
Q Consensus 490 ~l~~~~~~~~~~~~~--~~~~p~lv~~~~f~~~~l~~~~Lt~~~vft~l~lf~~l~~pl~~lp~~i~~~~qa~vS~~RI~ 567 (1065)
...+........... +......+.++++|.+.+..+.+++|.+++++.+......|+..+...+..+.++.++.+|+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~ 362 (1284)
T 3g5u_A 283 LGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVF 362 (1284)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999929988999999999999999999999999999999999999999
Q ss_pred HHHCCCCCCCC--CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 99613489999--88889889983089862279842654446788533357-7574089199998799999478998870
Q 001505 568 EFIKEDNQKKP--ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSIL 644 (1065)
Q Consensus 568 ~fL~~~e~~~~--~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~Ge~vaIvG~~GSGKSTLL~~ll 644 (1065)
++++.++..+. ....+.....+.|+++|++|+|+.+ ++.++|+| ||++++||++||||++|||||||+++|+
T Consensus 363 ~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~-----~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~ 437 (1284)
T 3g5u_A 363 KIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSR-----KEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQ 437 (1284)
T ss_dssp HTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSST-----TSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTT
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-----CCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 99728986776665677777777718999989976999-----9871012545897599889998999997999999980
Q ss_pred CCCCCCCCCEEEECCE-------------EEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHHCCCC
Q ss_conf 8655788857898796-------------899926887888868899863943-54688999999810017997401899
Q 001505 645 GEIPRISGAAIKVHGK-------------KAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGD 710 (1065)
Q Consensus 645 Ge~~~~~G~i~~i~g~-------------iayv~Q~pwI~~gTIreNIlfG~~-~d~~~y~~vl~ac~L~~di~~lp~Gd 710 (1065)
|+++|++|+| .++|. ++||+|+||+|++||+|||.||.+ .++++++++++.|+++++++.+|+|+
T Consensus 438 g~~~~~~G~i-~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~ 516 (1284)
T 3g5u_A 438 RLYDPLDGMV-SIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQF 516 (1284)
T ss_dssp TSSCCSEEEE-EETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGG
T ss_pred CCCCCCCEEE-EECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCC
T ss_conf 7889997389-999998775799999865489868875377669999745798999999999999829699997465633
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEE
Q ss_conf 73005888877988999999999980499899980877899976899999999965229968999817942130088899
Q 001505 711 LSVVGERGINLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVL 790 (1065)
Q Consensus 711 ~T~IGE~G~nLSGGQKQRIsLARAly~~adIlLLDDp~SAlDa~t~~~if~~~i~~~l~~kTvIlVTH~l~~l~~aD~Ii 790 (1065)
+|.+||+|.+|||||||||+||||++++|+|+||||||||||+++++.+ ++++....+++|+|+|||+++++..||+|+
T Consensus 517 ~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~i~~~d~i~ 595 (1284)
T 3g5u_A 517 DTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVV-QAALDKAREGRTTIVIAHRLSTVRNADVIA 595 (1284)
T ss_dssp GCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHH-HHHHHHHHTTSEEEEECSCHHHHTTCSEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEE
T ss_conf 4501478786599999999999999529998999798777799999999-999999739998999940778997499899
Q ss_pred EEECCEEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC----CCCCCC-CCCCCCC--CHHHHHCC-C--CCCCCC
Q ss_conf 994997989049778984022689999997220036899988----664345-6866664--10011004-8--887787
Q 001505 791 VMKDGKIEQSGKYEDLIADQNSELVRQMKAHRKSLDQVNPPQ----EDKCLS-RVPCQMS--QITEERFA-R--PISCGE 860 (1065)
Q Consensus 791 vl~~G~I~~~G~~~eLl~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~--~~~~~~~~-~--~~~~~~ 860 (1065)
+|++|+|++.|+|+|+++ .++.|.+++..+..........+ ...... ..+.... .....+.. . ......
T Consensus 596 vl~~G~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1284)
T 3g5u_A 596 GFDGGVIVEQGNHDELMR-EKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSICGPHDQ 674 (1284)
T ss_dssp ECSSSCCCCEECHHHHHH-TTSHHHHHHHHTC------------------------------------------------
T ss_pred EEECCEEEEECCHHHHHH-CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 998999999788999986-7877999999743002211133333322222344333333332000345433344564223
Q ss_pred CCCCCCCHHH--HCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCH----HHHHEEECCCCC----CCCHHHHH
Q ss_conf 8999820011--1285247999999999410268999999999999997301----233011125457----77812799
Q 001505 861 FSGRSQDEDT--ELGRVKWTVYSAFITLVYKGALVPVILLCQVLFQALQMGS----NYWIAWATDEKR----KVSREQLI 930 (1065)
Q Consensus 861 ~~~l~~~E~r--~~G~V~~~vY~~Y~~~~~g~~~~~~~~~~~~~~~~~~i~s----~~WL~~~~~~~~----~~~~~~~l 930 (1065)
.....++|+. .....++..++.|.+..... ++ +.+++.++..+..... ..|+..|....+ ......|.
T Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 752 (1284)
T 3g5u_A 675 DRKLSTKEALDEDVPPASFWRILKLNSTEWPY-FV-VGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFS 752 (1284)
T ss_dssp ---------CCCCCSCCCTTHHHHHHHHTCCC-CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 32110245553136625899999984515799-99-99999999999999999999999999855685033677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999999999998839543322--36734889786326789984789999999
Q 001505 931 GVFIFLSGGSSFFILGRAVLLATIAIKTAQRLFLNMITSVFRAPISFFD--STPSSRILNRCSTDQSTVDTDIPYRLAGL 1008 (1065)
Q Consensus 931 ~vY~~l~~~~~~~~~~r~~~~~~~~~~as~~Lh~~ll~~ilraPmsFFD--~tP~GrILNRfS~D~~~vD~~lp~~l~~~ 1008 (1065)
.+|+++++...++.+++.+++...+.+.++++|.+++++++++|++||| .+|+|+|+||+++|+..+|..++..+..+
T Consensus 753 ~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~ 832 (1284)
T 3g5u_A 753 LLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVI 832 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998399888757899889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999887799---9999999999999999988
Q 001505 1009 AFALIQLLSIIILMSQAAWQV---FPLFLVILGISIWYQARKL 1048 (1065)
Q Consensus 1009 ~~~~~~~l~~i~v~~~~~~~~---~~~~ipl~~~~~~~q~~Y~ 1048 (1065)
+...+.+++.++++....|++ +++++|+++++.+++.+++
T Consensus 833 ~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~ 875 (1284)
T 3g5u_A 833 FQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKML 875 (1284)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999969999999999999999999999999
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=685.40 Aligned_cols=541 Identities=17% Similarity=0.203 Sum_probs=400.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98999999999999999999999999999999855998875047999999999999999999999999999999999999
Q 001505 272 AVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRVRS 351 (1065)
Q Consensus 272 ~~~~~~~~~~~~~li~~~~~~~~P~ll~~li~~~~~~~~~~~~~~g~~l~~~l~~~~lv~~l~~~~~~~~~~~~g~~ir~ 351 (1065)
.+|..+++..++..+........++++...++............ +..+++.+++..++..++.....+...+.+.++..
T Consensus 749 ~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~ 827 (1321)
T 4f4c_A 749 PHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQ-GHFWALMFLVLAAAQGICSFLMTFFMGIASESLTR 827 (1321)
T ss_dssp GGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999999999999999999999999999998751793455667-89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCC----C-CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999997334568----9-8867999999965999999999-99999979999999999997985668999999999
Q 001505 352 ALTVLIYKRSMAIKFA----G-PSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFST 425 (1065)
Q Consensus 352 ~l~~~iy~K~L~ls~~----~-~~~Geiin~is~D~~~i~~~~~-~~~~~w~~plqi~ial~lL~~~lg~~~~l~~l~~~ 425 (1065)
.+...+|++.++.+.. . .++|+++|+++.|++.+.+.+. .+..+....+.++.++++++. ..|..++..++++
T Consensus 828 ~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~-~~~~l~lv~l~~~ 906 (1321)
T 4f4c_A 828 DLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFF-YGWQMALLIIAIL 906 (1321)
T ss_dssp HHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHH-HHHHHHHHHHHHH
T ss_conf 999999888734993332167888488885025059999999999999999986537777022137-8689999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999810799998450999999999999999999999999999999999
Q 001505 426 IFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFLF 505 (1065)
Q Consensus 426 ~l~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~ 505 (1065)
+++........++..+...+..+..++......|.++|+++||.|++|+.|.++..+.-+...+...+............
T Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1321)
T 4f4c_A 907 PIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCA 986 (1321)
T ss_dssp HHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999988898899999962798886141488999999999999999999999999999999
Q ss_pred HHH--HHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCC
Q ss_conf 999--799999999999883488--678889999999999999998999999999999999999999961348999-988
Q 001505 506 WAS--PTLVSVITFGVCILLKTP--LTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKK-PIT 580 (1065)
Q Consensus 506 ~~~--p~lv~~~~f~~~~l~~~~--Lt~~~vft~l~lf~~l~~pl~~lp~~i~~~~qa~vS~~RI~~fL~~~e~~~-~~~ 580 (1065)
... ...+.++.++.+.+..+. +.++.++..+..+.....|+..+......+.++..+.+|+.++++.+++.+ ...
T Consensus 987 ~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~ 1066 (1321)
T 4f4c_A 987 SSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSL 1066 (1321)
T ss_dssp TTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999999987578875376542147899999999877889999999999999999999989998607665777667
Q ss_pred CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf 889889983089862279842654446788533357-7574089199998799999478998870865578885789879
Q 001505 581 EPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG 659 (1065)
Q Consensus 581 ~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~Ge~vaIvG~~GSGKSTLL~~llGe~~~~~G~i~~i~g 659 (1065)
..+..+..+.|+|+|++|+||.+ ++.++|+| ||+|++||++||||++|||||||+++|+|+++|.+|+| .+||
T Consensus 1067 ~~~~~~~~g~I~f~nVsf~Y~~~-----~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I-~iDG 1140 (1321)
T 4f4c_A 1067 AGEKKKLYGKVIFKNVRFAYPER-----PEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEI-FIDG 1140 (1321)
T ss_dssp CSBCCCCCCCEEEEEEEECCTTS-----CSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEE-EETT
T ss_pred CCCCCCCCCEEEEEEEEEECCCC-----CCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE-EECC
T ss_conf 78788888818999879857999-----98821245169988989999989999819999999956863899789-9999
Q ss_pred -------------EEEEEECCCCCCCCCHHHHHHCCC---CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCH
Q ss_conf -------------689992688788886889986394---3546889999998100179974018997300588887798
Q 001505 660 -------------KKAYVPQSSWIQTGTIRENILFGK---DMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSG 723 (1065)
Q Consensus 660 -------------~iayv~Q~pwI~~gTIreNIlfG~---~~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGE~G~nLSG 723 (1065)
+++||||+|++|+|||||||.||. +.++++.+++++.|+++++++.||+|++|+|||+|.||||
T Consensus 1141 ~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSg 1220 (1321)
T 4f4c_A 1141 SEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSG 1220 (1321)
T ss_dssp EETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCH
T ss_pred EEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCH
T ss_conf 98654999999854599878997327239999745499999999999999998298499971767899982388915699
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEEEECCH
Q ss_conf 89999999999804998999808778999768999999999652299689998179421300888999949979890497
Q 001505 724 GQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKY 803 (1065)
Q Consensus 724 GQKQRIsLARAly~~adIlLLDDp~SAlDa~t~~~if~~~i~~~l~~kTvIlVTH~l~~l~~aD~Iivl~~G~I~~~G~~ 803 (1065)
||||||+||||+++||+|+||||||||||++|++.| ++.++...++||+|+||||++++..||+|+|||+|+|+|.|+|
T Consensus 1221 GQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~I-q~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth 1299 (1321)
T 4f4c_A 1221 GQKQRIAIARALVRNPKILLLDEATSALDTESEKVV-QEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTH 1299 (1321)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHH-HHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECH
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCH
T ss_conf 999999999999717998999681115789999999-9999997399989996068999996999999989899998888
Q ss_pred HHHHHHCCHHHHHHHHHHH
Q ss_conf 7898402268999999722
Q 001505 804 EDLIADQNSELVRQMKAHR 822 (1065)
Q Consensus 804 ~eLl~~~~~~~~~l~~~~~ 822 (1065)
+||++ .++.|.++++.|.
T Consensus 1300 ~eLl~-~~g~y~~L~~~Q~ 1317 (1321)
T 4f4c_A 1300 TQLMS-EKGAYYKLTQKQM 1317 (1321)
T ss_dssp HHHHH-CC-----------
T ss_pred HHHHH-CCCHHHHHHHHHH
T ss_conf 99984-9809999999998
No 4
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=663.68 Aligned_cols=546 Identities=21% Similarity=0.268 Sum_probs=445.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 799999989999999999999999999999999999998559988750479----9999999999999999999999999
Q 001505 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHY----GLVLASVFLFAKTVESLTQRQWYFG 341 (1065)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~li~~~~~~~~P~ll~~li~~~~~~~~~~~~~~----g~~l~~~l~~~~lv~~l~~~~~~~~ 341 (1065)
++.+++.+++.+++..++.++..++..+.|++++.++|.+........... .+.+++++++..++..+......+.
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (578)
T 4a82_A 5 YLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYL 84 (578)
T ss_dssp HHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998899999999999999999999999999999999998168711467788889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999997334568---988679999999659999999999-99999799999999999979856689
Q 001505 342 ANRIGIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAP 417 (1065)
Q Consensus 342 ~~~~g~~ir~~l~~~iy~K~L~ls~~---~~~~Geiin~is~D~~~i~~~~~~-~~~~w~~plqi~ial~lL~~~lg~~~ 417 (1065)
..+.+.++...++..+|+|.++++.. ..++|+++|++++|++++.+++.. ++.+|..++.+++++++++..-+ ..
T Consensus 85 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~-~l 163 (578)
T 4a82_A 85 AQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDV-KL 163 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCT-TT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_conf 99999999999999999999878999976898699999999999999999999999999999999999999999969-99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999998107999984509999999999999999999999999
Q 001505 418 AFAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYT 497 (1065)
Q Consensus 418 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~ 497 (1065)
++++++.+++.+++...+.++..+..++.++..+++.+.+.|.++|+++||.|+||+.+.+++.+..+...+...+....
T Consensus 164 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (578)
T 4a82_A 164 TLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRW 243 (578)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998249999981664999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999--7999999999998834886788899999999999999989999999999999999999999613489
Q 001505 498 CSAIAFLFWAS--PTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ 575 (1065)
Q Consensus 498 ~~~~~~~~~~~--p~lv~~~~f~~~~l~~~~Lt~~~vft~l~lf~~l~~pl~~lp~~i~~~~qa~vS~~RI~~fL~~~e~ 575 (1065)
........... ...+.+++++.+.+..+.+++|.+++++.++..+..|+..++..+..+.++.++.+|+.++++.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 323 (578)
T 4a82_A 244 NAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYD 323 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999985995899999999999999999999999999999999999999999768976
Q ss_pred -CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf -99988889889983089862279842654446788533357-7574089199998799999478998870865578885
Q 001505 576 -KKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGA 653 (1065)
Q Consensus 576 -~~~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~Ge~vaIvG~~GSGKSTLL~~llGe~~~~~G~ 653 (1065)
.+.....+.....+.++++|++|+|+.. ..++|+| |+++++||+++|+||+|||||||+++|+|+++|++|+
T Consensus 324 ~~~~~~~~~~~~~~~~i~~~~v~~~y~~~------~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 397 (578)
T 4a82_A 324 IKNGVGAQPIEIKQGRIDIDHVSFQYNDN------EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 397 (578)
T ss_dssp SCCCTTCCCCCCCSCCEEEEEEEECSCSS------SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEE
T ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCC------CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 66787766667778807999999975899------974134337998799999998999985999999984678899967
Q ss_pred EEEECC-------------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 789879-------------6899926887888868899863943-54688999999810017997401899730058888
Q 001505 654 AIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGI 719 (1065)
Q Consensus 654 i~~i~g-------------~iayv~Q~pwI~~gTIreNIlfG~~-~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGE~G~ 719 (1065)
| .++| +++||+|+||+|++||+|||.+|.+ .++++..++++.++++++++.+|+|++|.+||+|.
T Consensus 398 i-~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~ 476 (578)
T 4a82_A 398 I-LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGV 476 (578)
T ss_dssp E-EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGT
T ss_pred E-EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCC
T ss_conf 9-999998442789999600689928983476459999852799988999999998809599997573301025306889
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEEE
Q ss_conf 77988999999999980499899980877899976899999999965229968999817942130088899994997989
Q 001505 720 NLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQ 799 (1065)
Q Consensus 720 nLSGGQKQRIsLARAly~~adIlLLDDp~SAlDa~t~~~if~~~i~~~l~~kTvIlVTH~l~~l~~aD~Iivl~~G~I~~ 799 (1065)
+||||||||++||||++++|++++||||||+||+++++.+ .+++..+.+++|+|+|||+++.+..||+|++|++|+|++
T Consensus 477 ~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 555 (578)
T 4a82_A 477 KLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESII-QEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555 (578)
T ss_dssp TSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHH-HHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEE
T ss_conf 6799999999999999749999999786545799999999-999999808997999831789997199899998998999
Q ss_pred ECCHHHHHHHCCHHHHHHHHHH
Q ss_conf 0497789840226899999972
Q 001505 800 SGKYEDLIADQNSELVRQMKAH 821 (1065)
Q Consensus 800 ~G~~~eLl~~~~~~~~~l~~~~ 821 (1065)
.|+++|+++ .++.|.+++..+
T Consensus 556 ~g~~~el~~-~~~~~~~~~~~q 576 (578)
T 4a82_A 556 TGTHRELIA-KQGAYEHLYSIQ 576 (578)
T ss_dssp EECHHHHHH-TTSHHHHHHTTT
T ss_pred ECCHHHHHH-CCCHHHHHHHHH
T ss_conf 888999985-883899999850
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=658.59 Aligned_cols=541 Identities=20% Similarity=0.254 Sum_probs=444.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998999999999999999999999999999999855998875047999999999999999999999999999999999
Q 001505 269 IIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIR 348 (1065)
Q Consensus 269 l~~~~~~~~~~~~~~~li~~~~~~~~P~ll~~li~~~~~~~~~~~~~~g~~l~~~l~~~~lv~~l~~~~~~~~~~~~g~~ 348 (1065)
+++.+++.++...++.++..++..+.|++++.++|.+....+. .. ...++.++++..++..+......+...+.+.+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (598)
T 3qf4_B 31 YLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRF-DL--LPRYMLILGTIYALTSLLFWLQGKIMLTLSQD 107 (598)
T ss_dssp GTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCG-GG--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999736888-99--99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCC---CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999973345689---8867999999965999999999-9999997999999999999798566899999999
Q 001505 349 VRSALTVLIYKRSMAIKFAG---PSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAALFS 424 (1065)
Q Consensus 349 ir~~l~~~iy~K~L~ls~~~---~~~Geiin~is~D~~~i~~~~~-~~~~~w~~plqi~ial~lL~~~lg~~~~l~~l~~ 424 (1065)
+...++..+|+|.++++... +++|+++|++++|++++.+++. .+..++..++.++.++++++..-. ..+++.++.
T Consensus 108 ~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~-~l~l~~l~~ 186 (598)
T 3qf4_B 108 VVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNV-ILSLVTLSI 186 (598)
T ss_dssp HHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCH-HHHHHHTTH
T ss_pred HHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_conf 9999999999999779999976888899999999999999999999999999999999999999999989-999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999981079999845099999999999999999999999999999999
Q 001505 425 TIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAFL 504 (1065)
Q Consensus 425 ~~l~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 504 (1065)
+++.+++...+.++.++..++..+..+++.+.+.|.++|+++||.|+||+.+.+++.+.++...+...+...........
T Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (598)
T 3qf4_B 187 VPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPL 266 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999973799999748709999999999999999999999999999999
Q ss_pred HH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99--9979999999999988348867888999999999999999899999999999999999999996134899998888
Q 001505 505 FW--ASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKPITEP 582 (1065)
Q Consensus 505 ~~--~~p~lv~~~~f~~~~l~~~~Lt~~~vft~l~lf~~l~~pl~~lp~~i~~~~qa~vS~~RI~~fL~~~e~~~~~~~~ 582 (1065)
.. .....+.+++++.+.+..+.+++|.+++++.+...+..|+..++..+..+.++.++.+|+.++++.++..+.....
T Consensus 267 ~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~ 346 (598)
T 3qf4_B 267 MNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDPDAV 346 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999999999999999859978999999999999999999999999999999999999999997688777777777
Q ss_pred CCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECC--
Q ss_conf 9889983089862279842654446788533357-7574089199998799999478998870865578885789879--
Q 001505 583 TSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVHG-- 659 (1065)
Q Consensus 583 ~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~Ge~vaIvG~~GSGKSTLL~~llGe~~~~~G~i~~i~g-- 659 (1065)
+..+..+.|+++|++|+|+++ .++|+| |+++++||+++|+||+|||||||+++|+|+++|.+|+| .++|
T Consensus 347 ~~~~~~~~i~~~~v~~~y~~~-------~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i-~~~g~~ 418 (598)
T 3qf4_B 347 ELREVRGEIEFKNVWFSYDKK-------KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQI-LVDGID 418 (598)
T ss_dssp CCCSCCCCEEEEEEECCSSSS-------SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEE-EETTEE
T ss_pred CCCCCCCEEEEEEEEEECCCC-------CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEE-EECCEE
T ss_conf 777777718999989977999-------860122279986998899989999969999999945857998089-999998
Q ss_pred -----------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf -----------6899926887888868899863943-5468899999981001799740189973005888877988999
Q 001505 660 -----------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLSGGQKQ 727 (1065)
Q Consensus 660 -----------~iayv~Q~pwI~~gTIreNIlfG~~-~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGE~G~nLSGGQKQ 727 (1065)
+++||+|+|++|++||+|||.+|.+ .++++++++++.++++++++.+|+|++|.+||+|.+|||||||
T Consensus 419 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Q 498 (598)
T 3qf4_B 419 IRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQ 498 (598)
T ss_dssp GGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHH
T ss_pred HHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHH
T ss_conf 30188999984108990798232463999974479999999999999996978889746453236422788987999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998049989998087789997689999999996522996899981794213008889999499798904977898
Q 001505 728 RIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGKYEDLI 807 (1065)
Q Consensus 728 RIsLARAly~~adIlLLDDp~SAlDa~t~~~if~~~i~~~l~~kTvIlVTH~l~~l~~aD~Iivl~~G~I~~~G~~~eLl 807 (1065)
|++||||++++|+|++||||||+||+++++.+ .+++..+.+++|+|+|||+++.+..||+|++|++|+|++.|+|+|++
T Consensus 499 rv~iAral~~~p~illlDEpts~LD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~ 577 (598)
T 3qf4_B 499 LLAITRAFLANPKILILDEATSNVDTKTEKSI-QAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELI 577 (598)
T ss_dssp HHHHHHHHHTCCSEEEECCCCTTCCHHHHHHH-HHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999649999999897667999999999-99999980899899994277899719989999899999877899998
Q ss_pred HHCCHHHHHHHHHHHH
Q ss_conf 4022689999997220
Q 001505 808 ADQNSELVRQMKAHRK 823 (1065)
Q Consensus 808 ~~~~~~~~~l~~~~~~ 823 (1065)
+ .++.|.+++..+..
T Consensus 578 ~-~~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 578 Q-KRGFYYELFTSQYG 592 (598)
T ss_dssp H-TTCHHHHHHHHHHG
T ss_pred H-CCCHHHHHHHHHHH
T ss_conf 6-78779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=653.87 Aligned_cols=545 Identities=19% Similarity=0.259 Sum_probs=433.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98079999998999999999999999999999999999999855998875047999999999999999999999999999
Q 001505 263 TSLPQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGA 342 (1065)
Q Consensus 263 ~~l~~~l~~~~~~~~~~~~~~~li~~~~~~~~P~ll~~li~~~~~~~~~~~~~~g~~l~~~l~~~~lv~~l~~~~~~~~~ 342 (1065)
.+.++.+++.+|+.+++..++.++..++..+.|++++.++|......+. .. .+.++..+++..++..+......+..
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (587)
T 3qf4_A 11 SKTLARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGDF-SL--VLKTGILMLIVALIGAVGGIGCTVFA 87 (587)
T ss_dssp CCCGGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999998736987-99--99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999997334568---988679999999659999999999-999997999999999999798566899
Q 001505 343 NRIGIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAPA 418 (1065)
Q Consensus 343 ~~~g~~ir~~l~~~iy~K~L~ls~~---~~~~Geiin~is~D~~~i~~~~~~-~~~~w~~plqi~ial~lL~~~lg~~~~ 418 (1065)
.+.+.++...++..+|+|.++++.. ..++|+++|++++|++++.+++.. +..++..++.++.++++++. +.|..+
T Consensus 88 ~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~-~~~~l~ 166 (587)
T 3qf4_A 88 SYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVS-INVKLS 166 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_conf 9999999999999999999788979976588899999999999999999999999999999999999999999-989999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH----HHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999981079999845099999999999----99999999999
Q 001505 419 FAALFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRL----REIERDSLKKY 494 (1065)
Q Consensus 419 l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~----R~~E~~~l~~~ 494 (1065)
+..++.++++.++...+.++..+..++.++..+++.+.+.|.++|+++||.|+||+.+.+++.+. ++.+.+..+..
T Consensus 167 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (587)
T 3qf4_A 167 SVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLI 246 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999985599999862149999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999799999999999883488678889999999999999998999999999999999999999961348
Q 001505 495 LYTCSAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDN 574 (1065)
Q Consensus 495 ~~~~~~~~~~~~~~p~lv~~~~f~~~~l~~~~Lt~~~vft~l~lf~~l~~pl~~lp~~i~~~~qa~vS~~RI~~fL~~~e 574 (1065)
....... ........+.+++++.+.+.++.+++|.+++++.++..+..|+..++..+..+.++.++.+|+.++++.++
T Consensus 247 ~~~~~~~--~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 324 (587)
T 3qf4_A 247 VFALPLF--IFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKP 324 (587)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999--99999999999999999998499389999999999999999999999999999999999999999976897
Q ss_pred -CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf -999988889889983089862279842654446788533357-757408919999879999947899887086557888
Q 001505 575 -QKKPITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISG 652 (1065)
Q Consensus 575 -~~~~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~Ge~vaIvG~~GSGKSTLL~~llGe~~~~~G 652 (1065)
.++.....+.++..+.|+++|++|+|+.+ ..++|+| ||++++||+++|+||+|||||||+++|+|+++|++|
T Consensus 325 ~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~------~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G 398 (587)
T 3qf4_A 325 AIEEADNALALPNVEGSVSFENVEFRYFEN------TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERG 398 (587)
T ss_dssp SCCCCTTCBCCSCCCCCEEEEEEEECSSSS------SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEECCCC------CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 657887765668888807997889984899------97642111799869988999899999799999999278669986
Q ss_pred CEEEECC-------------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC
Q ss_conf 5789879-------------6899926887888868899863943-5468899999981001799740189973005888
Q 001505 653 AAIKVHG-------------KKAYVPQSSWIQTGTIRENILFGKD-MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1065)
Q Consensus 653 ~i~~i~g-------------~iayv~Q~pwI~~gTIreNIlfG~~-~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGE~G 718 (1065)
+| .++| +++||+|+|++|++||+|||.+|.+ .+++++.++++.|+++++++.+|+|++|.+||+|
T Consensus 399 ~i-~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~ 477 (587)
T 3qf4_A 399 RV-EVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGG 477 (587)
T ss_dssp EE-EESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSS
T ss_pred EE-EECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCC
T ss_conf 79-89999834078999984138977898676755999985248899999999999996849999756531212751898
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEE
Q ss_conf 87798899999999998049989998087789997689999999996522996899981794213008889999499798
Q 001505 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIE 798 (1065)
Q Consensus 719 ~nLSGGQKQRIsLARAly~~adIlLLDDp~SAlDa~t~~~if~~~i~~~l~~kTvIlVTH~l~~l~~aD~Iivl~~G~I~ 798 (1065)
.+||||||||++||||++++|+|++||||||+||+++++++. +.+..+.+++|+|+|||+++.+..||+|++|++|+|+
T Consensus 478 ~~LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~ 556 (587)
T 3qf4_A 478 RNFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRIL-DGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVA 556 (587)
T ss_dssp CSSCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHH-HHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEE
T ss_conf 992999999999999997299999997975447999999999-9999867999899982276889819989999899899
Q ss_pred EECCHHHHHHHCCHHHHHHHHHHH
Q ss_conf 904977898402268999999722
Q 001505 799 QSGKYEDLIADQNSELVRQMKAHR 822 (1065)
Q Consensus 799 ~~G~~~eLl~~~~~~~~~l~~~~~ 822 (1065)
+.|+|+|+++ .++.|.+++..+.
T Consensus 557 ~~g~~~el~~-~~~~~~~~~~~~~ 579 (587)
T 3qf4_A 557 GFGTHKELLE-HCKPYREIYESQF 579 (587)
T ss_dssp EEECHHHHHH-HCHHHHHHHHHHC
T ss_pred EECCHHHHHH-CCCHHHHHHHHHH
T ss_conf 9788999986-7839999999984
No 7
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=629.08 Aligned_cols=539 Identities=18% Similarity=0.225 Sum_probs=436.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999989999999999999999999999999999998559988750479999999999999999999999999999999
Q 001505 267 QVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIG 346 (1065)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~li~~~~~~~~P~ll~~li~~~~~~~~~~~~~~g~~l~~~l~~~~lv~~l~~~~~~~~~~~~g 346 (1065)
+.+.+.+++.+.+..++.++..++..+.|++++.++|.+..... ... .+.++.++++..++..+......+...+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (582)
T 3b60_A 17 WPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTD--RSV-LLWMPLVVIGLMILRGITSYISSYCISWVS 93 (582)
T ss_dssp HHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTT--HHH-HHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999998843686--579-999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCC---CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999973345689---8867999999965999999999-99999979999999999997985668999999
Q 001505 347 IRVRSALTVLIYKRSMAIKFAG---PSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1065)
Q Consensus 347 ~~ir~~l~~~iy~K~L~ls~~~---~~~Geiin~is~D~~~i~~~~~-~~~~~w~~plqi~ial~lL~~~lg~~~~l~~l 422 (1065)
.++...++..+|+|.++++... .++|+++|++++|++.+.+++. .+..++..++.+++++++++. +.|..+++.+
T Consensus 94 ~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~-~~~~l~li~l 172 (582)
T 3b60_A 94 GKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFY-YSWQLSIILV 172 (582)
T ss_dssp HHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_conf 999999999999999809999978898658999999879999999999999999999999999999999-8099999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999998107999984509999999999----9999999999999999
Q 001505 423 FSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLR----LREIERDSLKKYLYTC 498 (1065)
Q Consensus 423 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~~ik~IK~~~wE~~f~~~i~~----~R~~E~~~l~~~~~~~ 498 (1065)
+.+++..++...+.++..+..++.++..+++.+.+.|.++|+++||.|++|+.+.+++.+ .++.+.+..+......
T Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3b60_A 173 VLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISD 252 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999961999998376899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999997999999999998834886788899999999999999989999999999999999999999613489999
Q 001505 499 SAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKP 578 (1065)
Q Consensus 499 ~~~~~~~~~~p~lv~~~~f~~~~l~~~~Lt~~~vft~l~lf~~l~~pl~~lp~~i~~~~qa~vS~~RI~~fL~~~e~~~~ 578 (1065)
....++.... .+.++.++.+.+..+.+++|.+++++.++..+..|+..++..+..+.++.++.+|+.++++.+++.+.
T Consensus 253 ~~~~~~~~~~--~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b60_A 253 PIIQLIASLA--LAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDE 330 (582)
T ss_dssp HHHHHHHHHH--HHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999999999--99999999999984999899999999999999999999999999999999999999999759987667
Q ss_pred CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 88889889983089862279842654446788533357-75740891999987999994789988708655788857898
Q 001505 579 ITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKV 657 (1065)
Q Consensus 579 ~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~Ge~vaIvG~~GSGKSTLL~~llGe~~~~~G~i~~i 657 (1065)
.. .+.++..+.++++|++|+|+.+ +.++|+| |+++++||+++|+||+|||||||+++|+|.++|.+|+| .+
T Consensus 331 ~~-~~~~~~~~~i~~~~v~~~y~~~------~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i-~~ 402 (582)
T 3b60_A 331 GK-RVIDRATGDLEFRNVTFTYPGR------EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHI-LM 402 (582)
T ss_dssp CC-BCCSCCCCCEEEEEEEECSSSS------SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEE-EE
T ss_pred CC-CCCCCCCCCEEEEEEEEECCCC------CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEE-EE
T ss_conf 77-7777888847999889973999------9744156159976999899989999989999999861068989769-79
Q ss_pred CC-------------EEEEEECCCCCCCCCHHHHHHCCC--CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 79-------------689992688788886889986394--354688999999810017997401899730058888779
Q 001505 658 HG-------------KKAYVPQSSWIQTGTIRENILFGK--DMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1065)
Q Consensus 658 ~g-------------~iayv~Q~pwI~~gTIreNIlfG~--~~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGE~G~nLS 722 (1065)
+| +++||+|+|++|++|++|||.+|. ..++++++++++.++++++++.+|+|++|.+||+|.+||
T Consensus 403 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LS 482 (582)
T 3b60_A 403 DGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLS 482 (582)
T ss_dssp TTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSC
T ss_pred CCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99982306999999608088068747787899998545999989999999999849799998450411451147988789
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEEEECC
Q ss_conf 88999999999980499899980877899976899999999965229968999817942130088899994997989049
Q 001505 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1065)
Q Consensus 723 GGQKQRIsLARAly~~adIlLLDDp~SAlDa~t~~~if~~~i~~~l~~kTvIlVTH~l~~l~~aD~Iivl~~G~I~~~G~ 802 (1065)
||||||++||||++++|++++||||||+||+++++.+ .+.+..+.+++|+|+|||+++.+..||+|++|++|++++.|+
T Consensus 483 gGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i-~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b60_A 483 GGQRQRIAIARALLRDSPILILDEATSALDTESERAI-QAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGT 561 (582)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHH-HHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH-HHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 9999999999999728998999786555798999999-999999967997999945477898599899997888988458
Q ss_pred HHHHHHHCCHHHHHHHHHH
Q ss_conf 7789840226899999972
Q 001505 803 YEDLIADQNSELVRQMKAH 821 (1065)
Q Consensus 803 ~~eLl~~~~~~~~~l~~~~ 821 (1065)
++|+++ .++.|.++++.+
T Consensus 562 ~~~l~~-~~~~~~~~~~~q 579 (582)
T 3b60_A 562 HSELLA-QHGVYAQLHKMQ 579 (582)
T ss_dssp HHHHHH-HTSSHHHHHHHT
T ss_pred HHHHHH-CCCHHHHHHHHH
T ss_conf 999987-698899999975
No 8
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=627.79 Aligned_cols=540 Identities=19% Similarity=0.230 Sum_probs=438.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999998999999999999999999999999999999855998875047999999999999999999999999999999
Q 001505 266 PQVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRI 345 (1065)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~li~~~~~~~~P~ll~~li~~~~~~~~~~~~~~g~~l~~~l~~~~lv~~l~~~~~~~~~~~~ 345 (1065)
++.+.+.+++.+.+..++.++..++..+.|++++.++|.+...... . . .+.++.++++..++..+......+...+.
T Consensus 16 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (582)
T 3b5x_A 16 LWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAES-N-F-LRILPFMILGLMFVRGLSGFASSYCLSWV 92 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-H-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999889999999999999999999999999999999998646866-7-9-99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC---CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999997334568---98867999999965999999999-9999997999999999999798566899999
Q 001505 346 GIRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFFL-YIHRIWLLPVQVFLALVILYKNLGAAPAFAA 421 (1065)
Q Consensus 346 g~~ir~~l~~~iy~K~L~ls~~---~~~~Geiin~is~D~~~i~~~~~-~~~~~w~~plqi~ial~lL~~~lg~~~~l~~ 421 (1065)
+.++...++..+|+|.++++.. .+++|+++|++++|++.+.+++. .+..++..++.+++++++++. +.|..+++.
T Consensus 93 ~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~-~~~~l~li~ 171 (582)
T 3b5x_A 93 SGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFW-NSWQLSLVL 171 (582)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_conf 9999999999999999869999977898789999999889999999999999999999999999999999-829999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH----HHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999999810799998450999999999----9999999999999999
Q 001505 422 LFSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLL----RLREIERDSLKKYLYT 497 (1065)
Q Consensus 422 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~~ik~IK~~~wE~~f~~~i~----~~R~~E~~~l~~~~~~ 497 (1065)
++.+++..++...+.++..+..++.++..++..+.+.|.++|+++||.|++|+.+.+++. +.++.+.+..+.....
T Consensus 172 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3b5x_A 172 IVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIA 251 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999995199999708759999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999799999999999883488678889999999999999998999999999999999999999961348999
Q 001505 498 CSAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKK 577 (1065)
Q Consensus 498 ~~~~~~~~~~~p~lv~~~~f~~~~l~~~~Lt~~~vft~l~lf~~l~~pl~~lp~~i~~~~qa~vS~~RI~~fL~~~e~~~ 577 (1065)
.....++.... .+.++.++.+.+..+.+++|.+++++.++..+..|+..++..+..+.++.++++|+.++++.+++.+
T Consensus 252 ~~~~~~~~~~~--~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~ 329 (582)
T 3b5x_A 252 DPVIQMIASLA--LFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERD 329 (582)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999--9999999999998599889999999999999999999999999999999999999999975897677
Q ss_pred CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 988889889983089862279842654446788533357-7574089199998799999478998870865578885789
Q 001505 578 PITEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIK 656 (1065)
Q Consensus 578 ~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~Ge~vaIvG~~GSGKSTLL~~llGe~~~~~G~i~~ 656 (1065)
.. ..+.++..+.++++|++|+|+++ +.++|+| |+++++||+++|+||+|||||||+++|+|.++|++|+| .
T Consensus 330 ~~-~~~~~~~~~~i~~~~v~~~y~~~------~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i-~ 401 (582)
T 3b5x_A 330 NG-KYEAERVNGEVDVKDVTFTYQGK------EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSI-C 401 (582)
T ss_pred CC-CCCCCCCCCEEEEEEEEEECCCC------CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE-E
T ss_conf 77-77777788828999989972899------8654004169987999899989999979999999965778999879-8
Q ss_pred ECC-------------EEEEEECCCCCCCCCHHHHHHCCC--CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 879-------------689992688788886889986394--35468899999981001799740189973005888877
Q 001505 657 VHG-------------KKAYVPQSSWIQTGTIRENILFGK--DMRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINL 721 (1065)
Q Consensus 657 i~g-------------~iayv~Q~pwI~~gTIreNIlfG~--~~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGE~G~nL 721 (1065)
++| .++||+|+|++|++|++|||.+|. +.++++++++++.++++++++.+|+|++|.+||+|.+|
T Consensus 402 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~L 481 (582)
T 3b5x_A 402 LDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSL 481 (582)
T ss_pred ECCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCC
T ss_conf 99998563889999648589827990531029999856688999999999999987989999847653345106888847
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEEEEC
Q ss_conf 98899999999998049989998087789997689999999996522996899981794213008889999499798904
Q 001505 722 SGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSG 801 (1065)
Q Consensus 722 SGGQKQRIsLARAly~~adIlLLDDp~SAlDa~t~~~if~~~i~~~l~~kTvIlVTH~l~~l~~aD~Iivl~~G~I~~~G 801 (1065)
|||||||++||||++++|++++||||||+||+++++.+ .+.+..+.+++|+|+|||+++.+..||+|++|++|++++.|
T Consensus 482 SgGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i-~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 560 (582)
T 3b5x_A 482 SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAI-QAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERG 560 (582)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEEC
T ss_conf 99999999999999749999999785446899999999-99999972899899993688999819989999899899977
Q ss_pred CHHHHHHHCCHHHHHHHHHH
Q ss_conf 97789840226899999972
Q 001505 802 KYEDLIADQNSELVRQMKAH 821 (1065)
Q Consensus 802 ~~~eLl~~~~~~~~~l~~~~ 821 (1065)
+++|+++ .++.|.++++.+
T Consensus 561 ~~~~l~~-~~~~~~~~~~~q 579 (582)
T 3b5x_A 561 RHADLLA-QDGAYAQLHRIQ 579 (582)
T ss_pred CHHHHHH-CCCHHHHHHHHH
T ss_conf 8999984-885899999986
No 9
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=626.77 Aligned_cols=545 Identities=21% Similarity=0.245 Sum_probs=429.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999989999999999999999999999999999998559988750479999999999999999999999999999999
Q 001505 267 QVIIHAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSSYHYGLVLASVFLFAKTVESLTQRQWYFGANRIG 346 (1065)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~li~~~~~~~~P~ll~~li~~~~~~~~~~~~~~g~~l~~~l~~~~lv~~l~~~~~~~~~~~~g 346 (1065)
+.+++.+++.+.+..++.++..++..+.|++++.++|.+............+.++..+++..++..+......+...+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (595)
T 2yl4_A 11 LGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSG 90 (595)
T ss_dssp HHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99988789999999999999999999999999999999973574026679999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCC---CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999997334568---9886799999996599999999-999999979999999999997985668999999
Q 001505 347 IRVRSALTVLIYKRSMAIKFA---GPSSGIIINMINVDVERIGDFF-LYIHRIWLLPVQVFLALVILYKNLGAAPAFAAL 422 (1065)
Q Consensus 347 ~~ir~~l~~~iy~K~L~ls~~---~~~~Geiin~is~D~~~i~~~~-~~~~~~w~~plqi~ial~lL~~~lg~~~~l~~l 422 (1065)
.++...++..+|+|.++++.. .+++|+++|++++|++.+.+++ ..+..++..++.+++++++++. +.|..++..+
T Consensus 91 ~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~-~~~~l~li~l 169 (595)
T 2yl4_A 91 QRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFF-VSPNLATFVL 169 (595)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_conf 999999999999999819999977798488999999999999999999999999999999999999999-8199999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999998107999984509999999999----9999999999999999
Q 001505 423 FSTIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLR----LREIERDSLKKYLYTC 498 (1065)
Q Consensus 423 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~~ik~IK~~~wE~~f~~~i~~----~R~~E~~~l~~~~~~~ 498 (1065)
+.+++..++...+.++..+..++.++..++..+.+.|.++|+++||.|++|+.+.+++.+ .++.+.+..+......
T Consensus 170 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (595)
T 2yl4_A 170 SVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFF 249 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999811999998375699999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CC
Q ss_conf 99999999997999999999998834886788899999999999999989999999999999999999999613489-99
Q 001505 499 SAIAFLFWASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQ-KK 577 (1065)
Q Consensus 499 ~~~~~~~~~~p~lv~~~~f~~~~l~~~~Lt~~~vft~l~lf~~l~~pl~~lp~~i~~~~qa~vS~~RI~~fL~~~e~-~~ 577 (1065)
....++. ....+.++.+|.+.+.++.+++|.+++++.+...+..|+..++..+..+.++.++.+|+.++++.++. ++
T Consensus 250 ~~~~~~~--~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 327 (595)
T 2yl4_A 250 GATGLSG--NLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPF 327 (595)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCS
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999999--99999999999999986997899999999999999999999999999999999999999999838976677
Q ss_pred CCCCCCCCCCCCC-EEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEE
Q ss_conf 9888898899830-89862279842654446788533357-757408919999879999947899887086557888578
Q 001505 578 PITEPTSKASDVA-IDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAI 655 (1065)
Q Consensus 578 ~~~~~~~~~~~~~-I~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~Ge~vaIvG~~GSGKSTLL~~llGe~~~~~G~i~ 655 (1065)
.....+..+..+. |+++|++|+|+.+ ++.++|+| |+++++||+++|+||+|||||||+++|.|.++|++|+|
T Consensus 328 ~~~~~~~~~~~~~~i~~~~v~~~y~~~-----~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i- 401 (595)
T 2yl4_A 328 NEGVILNEKSFQGALEFKNVHFAYPAR-----PEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTI- 401 (595)
T ss_dssp SCSBCCCTTTCCCCEEEEEEEEECSSC-----TTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEE-
T ss_pred CCCCCCCCCCCCCEEEEEEEEEEECCC-----CCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE-
T ss_conf 778777767899838999889985899-----88812011279984998899989999979999999825857898379-
Q ss_pred EECC-------------EEEEEECCCCCCCCCHHHHHHCCCC----CCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC
Q ss_conf 9879-------------6899926887888868899863943----5468899999981001799740189973005888
Q 001505 656 KVHG-------------KKAYVPQSSWIQTGTIRENILFGKD----MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERG 718 (1065)
Q Consensus 656 ~i~g-------------~iayv~Q~pwI~~gTIreNIlfG~~----~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGE~G 718 (1065)
.++| +++||+|+|++|++|++|||.+|.+ .++++++++++.++++++++.+|+|++|.+||+|
T Consensus 402 ~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~ 481 (595)
T 2yl4_A 402 SLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKG 481 (595)
T ss_dssp EETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSS
T ss_pred EECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCC
T ss_conf 99999811179999973228983688326877999984058776656899999999986979999747320135016887
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEE
Q ss_conf 87798899999999998049989998087789997689999999996522996899981794213008889999499798
Q 001505 719 INLSGGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIE 798 (1065)
Q Consensus 719 ~nLSGGQKQRIsLARAly~~adIlLLDDp~SAlDa~t~~~if~~~i~~~l~~kTvIlVTH~l~~l~~aD~Iivl~~G~I~ 798 (1065)
.+||||||||++||||++++|++++||||||+||+++++.+ .+.+..+.+++|+|+|||+++.+..||+|++|++|+++
T Consensus 482 ~~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i-~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~ 560 (595)
T 2yl4_A 482 VLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLV-QEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKIT 560 (595)
T ss_dssp CCCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHH-HHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEE
T ss_conf 86899999999999999759999999886668998999999-99999996599799994687899759989999899899
Q ss_pred EECCHHHHHHHCCHHHHHHHHHH
Q ss_conf 90497789840226899999972
Q 001505 799 QSGKYEDLIADQNSELVRQMKAH 821 (1065)
Q Consensus 799 ~~G~~~eLl~~~~~~~~~l~~~~ 821 (1065)
+.|+++|++++.++.|.+++..+
T Consensus 561 ~~g~~~~l~~~~~~~~~~~~~~q 583 (595)
T 2yl4_A 561 EYGKHEELLSKPNGIYRKLMNKQ 583 (595)
T ss_dssp EEECSCC------C---------
T ss_pred EECCHHHHHHCCCHHHHHHHHHH
T ss_conf 97889999747872999999974
No 10
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=585.57 Aligned_cols=544 Identities=17% Similarity=0.220 Sum_probs=405.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9989999999999999999999999999999998559988750-479999999999999999999999999999999999
Q 001505 271 HAVWKSLALNAAFAGVNTIASYIGPFLITNFVSFLSGKHDHSS-YHYGLVLASVFLFAKTVESLTQRQWYFGANRIGIRV 349 (1065)
Q Consensus 271 ~~~~~~~~~~~~~~li~~~~~~~~P~ll~~li~~~~~~~~~~~-~~~g~~l~~~l~~~~lv~~l~~~~~~~~~~~~g~~i 349 (1065)
+..|+.+++..++.++...+....|+++..+++.......... ......+...+++..++..+......+...+.+.++
T Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~ 780 (1284)
T 3g5u_A 701 STEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEIL 780 (1284)
T ss_dssp HHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 51579999999999999999999999999999998556850336779999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCC-----CCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999997334568-----988679999999659999999999-99999799999999999979856689999999
Q 001505 350 RSALTVLIYKRSMAIKFA-----GPSSGIIINMINVDVERIGDFFLY-IHRIWLLPVQVFLALVILYKNLGAAPAFAALF 423 (1065)
Q Consensus 350 r~~l~~~iy~K~L~ls~~-----~~~~Geiin~is~D~~~i~~~~~~-~~~~w~~plqi~ial~lL~~~lg~~~~l~~l~ 423 (1065)
...++..+|+|.++.+.. ..++|+++|+++.|++.+.++... +..+....+.++.++++++ ..+|..++..++
T Consensus 781 ~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~-~~~~~l~lv~l~ 859 (1284)
T 3g5u_A 781 TKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISL-IYGWQLTLLLLA 859 (1284)
T ss_dssp HHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_conf 9999999999998399888757899889999999999999999999999999999999999999999-996999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999998107999984509999999999999999999999999999999
Q 001505 424 STIFVMVSNTPLANRQERFHSMIMEAKDARIKATSETLKSMRVLKLLSWEQEFLKKLLRLREIERDSLKKYLYTCSAIAF 503 (1065)
Q Consensus 424 ~~~l~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~ 503 (1065)
.+++++.+.....+...+...+..+..++..+...|.++|+++||.+++|+.+.++..+..+...+...+..........
T Consensus 860 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1284)
T 3g5u_A 860 IVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFS 939 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999889999984659999999999999999999999999999999
Q ss_pred HHH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--C
Q ss_conf 999--997999999999998834886788899999999999999989999999999999999999999613489999--8
Q 001505 504 LFW--ASPTLVSVITFGVCILLKTPLTSGAVLSALATFRILQEPIYNLPELISMIAQTKVSLYRIQEFIKEDNQKKP--I 579 (1065)
Q Consensus 504 ~~~--~~p~lv~~~~f~~~~l~~~~Lt~~~vft~l~lf~~l~~pl~~lp~~i~~~~qa~vS~~RI~~fL~~~e~~~~--~ 579 (1065)
... .....+..+++|.+.+..+.++.+.++.++.+......|+..+......+.++..+.+|+.++++.+++.+. .
T Consensus 940 ~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~ 1019 (1284)
T 3g5u_A 940 FTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYST 1019 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999999999999999990980699999999999999999999999999999999999999999838876666555
Q ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC-CEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf 8889889983089862279842654446788533357-757408919999879999947899887086557888578987
Q 001505 580 TEPTSKASDVAIDIEAGEYAWDAREENFKKPTIKLTD-KMKIMKGSKVAVCGSVGSGKSSLLSSILGEIPRISGAAIKVH 658 (1065)
Q Consensus 580 ~~~~~~~~~~~I~i~~~~fsw~~~~~~~~~~~~~L~~-nl~i~~Ge~vaIvG~~GSGKSTLL~~llGe~~~~~G~i~~i~ 658 (1065)
...+.....+.|+++|++|+|+.. ++.++|+| ||++++||++||+|++|||||||+++|.|.++|.+|+| .++
T Consensus 1020 ~~~~~~~~~g~i~~~~v~~~y~~~-----~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I-~i~ 1093 (1284)
T 3g5u_A 1020 QGLKPNMLEGNVQFSGVVFNYPTR-----PSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSV-FLD 1093 (1284)
T ss_dssp SCCCTTTTSCCEEEEEEEBCCSCG-----GGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEE-ESS
T ss_pred CCCCCCCCCCCEEEEEEEEECCCC-----CCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE-EEC
T ss_conf 665456777857999989977999-----98700203059976998899988999978999999946867899779-899
Q ss_pred C-------------EEEEEECCCCCCCCCHHHHHHCCCC---CCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 9-------------6899926887888868899863943---54688999999810017997401899730058888779
Q 001505 659 G-------------KKAYVPQSSWIQTGTIRENILFGKD---MRQSFYEEVLEGCALNQDIEMWADGDLSVVGERGINLS 722 (1065)
Q Consensus 659 g-------------~iayv~Q~pwI~~gTIreNIlfG~~---~d~~~y~~vl~ac~L~~di~~lp~Gd~T~IGE~G~nLS 722 (1065)
| +++||||+|.+|++||+|||.+|.+ .++++..++++.+++++.++.+|+|++|.+||+|.+||
T Consensus 1094 g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LS 1173 (1284)
T 3g5u_A 1094 GKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLS 1173 (1284)
T ss_dssp SSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSC
T ss_pred CEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99800078999970268987787406666999974668778999999999999839599997270424561178889338
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEEECCEEEEECC
Q ss_conf 88999999999980499899980877899976899999999965229968999817942130088899994997989049
Q 001505 723 GGQKQRIQLARAVYSNSDVYIFDDPFSAVDAHTGTHLFKQCLMGLLSQKTVLYTTHQLEFLDAADLVLVMKDGKIEQSGK 802 (1065)
Q Consensus 723 GGQKQRIsLARAly~~adIlLLDDp~SAlDa~t~~~if~~~i~~~l~~kTvIlVTH~l~~l~~aD~Iivl~~G~I~~~G~ 802 (1065)
||||||++||||++++|+|++||||||+||+++++.+ .+.+....+++|+|+|||+++++..||+|++|++|+|++.|+
T Consensus 1174 gGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i-~~~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~ 1252 (1284)
T 3g5u_A 1174 GGQKQRIAIARALVRQPHILLLDEATSALDTESEKVV-QEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGT 1252 (1284)
T ss_dssp HHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHH-HHHHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 9999999999999749999998687555799999999-999998679998999955879998099899998998999778
Q ss_pred HHHHHHHCCHHHHHHHHHHHH
Q ss_conf 778984022689999997220
Q 001505 803 YEDLIADQNSELVRQMKAHRK 823 (1065)
Q Consensus 803 ~~eLl~~~~~~~~~l~~~~~~ 823 (1065)
|+|+++ .++.|.+++..+..
T Consensus 1253 ~~~l~~-~~g~y~~l~~~q~~ 1272 (1284)
T 3g5u_A 1253 HQQLLA-QKGIYFSMVSVQAG 1272 (1284)
T ss_dssp HHHHHH-SCSHHHHHHHHHC-
T ss_pred HHHHHH-CCCHHHHHHHHHHH
T ss_conf 999984-77779999999761
Done!