BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001506
(1065 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1
OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2
Length = 1041
Score = 1486 bits (3846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 796/1078 (73%), Positives = 895/1078 (83%), Gaps = 50/1078 (4%)
Query: 1 MPRRRDDDDDEMDAEEDEYD---EQVMDDEIDEEEEEEDDRSSRKRRRSQFIDDVAEEDD 57
MPR RD+DD E+D + + D E+ D+E +EE S RKR RS FIDD AEED
Sbjct: 1 MPRSRDEDD-ELDGDYEALDLEEEEEEDEEEEEERGRGGGGSRRKRGRSNFIDDYAEEDS 59
Query: 58 EEEEEDYDDDEDYGGGGGAARKPKAKRRSGSEFFDLEA-QVDSDEEEDEEEGEDDFIVDG 116
+EE++D +D GG GAA K K+ S S F D EA QVD ++EE+E+E EDDFIVD
Sbjct: 60 QEEDDDDEDYGSSRGGKGAASK--RKKPSASIFLDREAHQVDDEDEEEEDEAEDDFIVDN 117
Query: 117 GAELPDEDGGRGIHRRPLLPREDEQEDVEALERRIQARYARSSHTEYDEETTDVEQQALL 176
G +LPDE G R RR LPR++ EDVE LERRIQ R++ H EYDEE T+VEQQALL
Sbjct: 118 GTDLPDERGDRRYERR-FLPRDENDEDVEDLERRIQERFSSRHHEEYDEEATEVEQQALL 176
Query: 177 PSVRDPKLWMVKCAIGREREAAVCLMQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAH 236
PSVRDPKLWMVKCAIGRERE AVCLMQK ID+G++LQIRSV+ALDHLKN+IY+EADKEAH
Sbjct: 177 PSVRDPKLWMVKCAIGREREVAVCLMQKFIDRGADLQIRSVVALDHLKNFIYVEADKEAH 236
Query: 237 VKEACKGLRNIYS-QKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVD 295
VKEA KG+RNIY+ QK++LVPIREMTDVL+VESKAIDLSRDTWVRMKIG YKGDLAKVVD
Sbjct: 237 VKEAIKGMRNIYANQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVD 296
Query: 296 VDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRD 355
VDNVRQRVTVKLIPRIDLQALA+KL+GREV+KKK FVPPPRFMN+DEARELHIRVERRRD
Sbjct: 297 VDNVRQRVTVKLIPRIDLQALASKLDGREVSKKKAFVPPPRFMNIDEARELHIRVERRRD 356
Query: 356 PMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLST 415
MTGDYFENIGGMLFKDGF YK VS+KSI+ QN+ PTFDELEKF P ENGE D LST
Sbjct: 357 HMTGDYFENIGGMLFKDGFHYKQVSLKSITVQNVTPTFDELEKFNKPSENGEGDFGGLST 416
Query: 416 LFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCK 475
LFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV IR E+KGLP LAVN +ELCK
Sbjct: 417 LFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVLIRSEVKGLPDPLAVNERELCK 476
Query: 476 YFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITK 535
YFEPGNHVKVVSGT GATGMV+KV+QHVLIILSDTTKE +RVFAD VVESSEVTTG+TK
Sbjct: 477 YFEPGNHVKVVSGTHEGATGMVVKVDQHVLIILSDTTKEHVRVFADHVVESSEVTTGVTK 536
Query: 536 IGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQD 595
IGDYEL DLVLLDN SFGVIIR+E+EAFQVLKGVPDRPEVALVKLREIKCKLEKK NVQD
Sbjct: 537 IGDYELHDLVLLDNLSFGVIIRLENEAFQVLKGVPDRPEVALVKLREIKCKLEKKINVQD 596
Query: 596 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 655
R KN +AVKD VR++EGP KGKQGPV+HIY+G+LFI+DRHHLEHAGFICAK +SC+VVGG
Sbjct: 597 RYKNVIAVKDDVRVIEGPSKGKQGPVKHIYKGVLFIYDRHHLEHAGFICAKCTSCIVVGG 656
Query: 656 SRANGDRN-GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGH-----DALVG 709
SR+ +RN GD+ SR+ + + P +P SPGR+ RG + G GG D+L+G
Sbjct: 657 SRSGANRNGGDSLSRYGNFKAPAPVPSSPGRFQRGRGGGYNNSGGRHGGGRGRGDDSLLG 716
Query: 710 TTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRYIELFF 769
TTVK+RLGP+KGYRG VV+VKG SVRVELE MK+VTVDR ISDN V +TP+R
Sbjct: 717 TTVKIRLGPFKGYRGPVVEVKGNSVRVELE--MKIVTVDRGAISDN-VATTPFR------ 767
Query: 770 ILFYHFLMLKLTVHVIMFCSDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMR 829
DT RY MGSETPMHPSRTPLHPYMTPMRD+GATPIHDGMR
Sbjct: 768 --------------------DTSRYSMGSETPMHPSRTPLHPYMTPMRDSGATPIHDGMR 807
Query: 830 TPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGG 889
TPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGG
Sbjct: 808 TPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGG 867
Query: 890 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMS 949
+YSDAGTPRD S Y NAPSPYLPSTP GQPMTP+SASYLPGTPGGQPMTPGT GLD MS
Sbjct: 868 SYSDAGTPRDHGSAYANAPSPYLPSTP-GQPMTPSSASYLPGTPGGQPMTPGT-GLDVMS 925
Query: 950 PVIGADNEGPWFMPDILV--RRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNE 1007
PVIG D E WFMPDILV ++GE++ VGVIR+V DG+C+V LGSSG GDTI ALP+E
Sbjct: 926 PVIGGDAEA-WFMPDILVDIHKAGEDTDVGVIRDV-SDGTCKVSLGSSGEGDTIMALPSE 983
Query: 1008 IEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 1065
+EI+PPRK+D++KI+GG +RG+TGKLIG+DG+DGIVK+D +LDVKILD+A+LAK QP
Sbjct: 984 LEIIPPRKSDRVKIVGGQYRGSTGKLIGIDGSDGIVKIDDNLDVKILDLALLAKFVQP 1041
>sp|O80770|SPT52_ARATH Putative transcription elongation factor SPT5 homolog 2
OS=Arabidopsis thaliana GN=At2g34210 PE=2 SV=2
Length = 989
Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/970 (63%), Positives = 722/970 (74%), Gaps = 96/970 (9%)
Query: 112 FIVDGGAELPDEDGGRGIHRRPLLPR--EDEQEDVEALERR----IQARYARSSHTEYDE 165
FIV G A+LP+ED HRR R +EDV+ LE+R + +YA+ + E D+
Sbjct: 98 FIVSGEADLPNEDSD---HRRQYYQRGFHPHEEDVDELEKRTLERLSTKYAKDDY-ELDD 153
Query: 166 ETTDVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCIDKGSELQIRSVIALDHLKN 225
DV+QQALLPSVRDPKLW+VKCAIGRERE AVCLMQK +D+GSE +IRS IALDHL+N
Sbjct: 154 -VNDVDQQALLPSVRDPKLWLVKCAIGREREVAVCLMQKIVDRGSEFKIRSAIALDHLQN 212
Query: 226 YIYIEADKEAHVKEACKGLRNIYS-QKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIG 284
Y+YIEAD EAHVKEA KG+RNIY+ QK++LVPI+EMT VL+VESKAIDLSRD+WVRMK+G
Sbjct: 213 YVYIEADMEAHVKEAIKGMRNIYANQKILLVPIKEMTAVLSVESKAIDLSRDSWVRMKLG 272
Query: 285 NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEAR 344
YKGDLA+VVDVDNVR+RVTVKLIPRIDLQALANKLEG E KKK F PPPRFMN+DEAR
Sbjct: 273 IYKGDLAQVVDVDNVRKRVTVKLIPRIDLQALANKLEGTENVKKKAFAPPPRFMNIDEAR 332
Query: 345 ELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGE 404
ELHIRVE RRDPMTGDYFENIGGMLFKDGFLYK VS KSI+AQN+ PTFDELE+F+ P E
Sbjct: 333 ELHIRVEHRRDPMTGDYFENIGGMLFKDGFLYKKVSTKSIAAQNVTPTFDELERFKRPNE 392
Query: 405 NGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPK 464
NGE D STLFANRKKGHFMKGDAVIVIKGDLKNLKGW+EKVDEENV IR EMK LP
Sbjct: 393 NGEIDFVDESTLFANRKKGHFMKGDAVIVIKGDLKNLKGWIEKVDEENVLIRSEMKDLPN 452
Query: 465 TLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVV 524
+AVN +ELCKYFEPGN VKVVSG G TGM++KV+QH+LIILSDTTKE I VFAD V
Sbjct: 453 PIAVNGRELCKYFEPGNFVKVVSGIHEGGTGMIVKVDQHMLIILSDTTKEHICVFADHVA 512
Query: 525 ESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIK 584
+S+EVT G+TKIGDYEL DLV+L + SFGVI++++SEA Q+LKGVPD EV++VK EIK
Sbjct: 513 KSAEVTKGVTKIGDYELHDLVILSDFSFGVILKLDSEAIQILKGVPDSSEVSIVKASEIK 572
Query: 585 CKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFIC 644
K+ KK NVQDR KN VAVKDVVR++EGP KGKQGPV IY+G+LFIHDRH+LEH GFIC
Sbjct: 573 YKIWKKINVQDRYKNVVAVKDVVRVIEGPSKGKQGPVVQIYKGVLFIHDRHNLEHTGFIC 632
Query: 645 AKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSR---GGPPAGGRNRGGR 701
+ SSCV+ GG + +TP +P SP R+ R G P G G
Sbjct: 633 TRCSSCVLAGG----------------NFKTPALVPPSPRRFQRADMGYNPGAGGRHQGG 676
Query: 702 GGH---DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVV 758
G D LVGT VK+RLGP+KGY GR+V+VK + VRVELE+ K+VTV+R ISD
Sbjct: 677 RGRRGDDHLVGTYVKIRLGPFKGYSGRLVEVKDKLVRVELEA--KIVTVERKAISD---- 730
Query: 759 STPYRYIELFFILFYHFLMLKLTVHVIMFCSDTPRYGMGSETPMHPSRTPLHPYMTPMRD 818
+T +V+ TP+Y MGS+TPMHPSRTPLHP MTPMR
Sbjct: 731 ---------------------MTDNVVA----TPQYNMGSQTPMHPSRTPLHPCMTPMRH 765
Query: 819 AGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPT 878
+GATPIHDGMRTPMR RAWNPY PMSPPRDNWEDGNPGSWGTSP YEA T
Sbjct: 766 SGATPIHDGMRTPMRGRAWNPYMPMSPPRDNWEDGNPGSWGTSP-----------YEAAT 814
Query: 879 PGSGW-ASTPG-GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQ 936
PGS W +STPG +Y DAGTP +++ NAPS PMTP+S SYLP TPGGQ
Sbjct: 815 PGSDWGSSTPGRSSYRDAGTPINNA----NAPS----------PMTPSSTSYLPTTPGGQ 860
Query: 937 PMTPGTGGLDAMSPVIGADNEGPWFMPDIL--VRRSGEESVVGVIREVLPDGSCRVVLGS 994
MTPGT LD MS IG D E F+P IL V ++GE+ GVIR+VLPDGSC V LG
Sbjct: 861 AMTPGT-DLDVMSLDIGGDAE-TRFIPGILVNVHKAGEDRNPGVIRDVLPDGSCVVALGH 918
Query: 995 SGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKIL 1054
G G+TI A N++ +V P+K +++KI+GG + G+T K+IG DG DGIVK+D SLD+KIL
Sbjct: 919 RGEGETIRATQNKVSLVCPKKNERVKILGGKYCGSTAKVIGEDGQDGIVKLDESLDIKIL 978
Query: 1055 DMAILAKLAQ 1064
+ ILAKL
Sbjct: 979 KLTILAKLVH 988
>sp|O55201|SPT5H_MOUSE Transcription elongation factor SPT5 OS=Mus musculus GN=Supt5h PE=1
SV=1
Length = 1082
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 341/1028 (33%), Positives = 531/1028 (51%), Gaps = 108/1028 (10%)
Query: 100 DEEEDEEEGEDDFIVDGGAELPDEDGGRGIHRRPLLPREDEQEDVEALERRIQARYARSS 159
++EE E D+ ++D D G R + L R+ +E+ L +YA+SS
Sbjct: 99 EKEEIEASNIDNVVLD-----EDRSGARRLQN---LWRDQREEE---LGEYYMKKYAKSS 147
Query: 160 --HTEY---DEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCID---KGSE 211
T Y DE + D+ QQ LLP V+DP LW VKC IG ER A+ LM+K I +
Sbjct: 148 VGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTP 207
Query: 212 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 267
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 208 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 265
Query: 268 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 326
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 266 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 325
Query: 327 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 385
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 326 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 380
Query: 386 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 445
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 381 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 438
Query: 446 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 505
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 439 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 498
Query: 506 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 565
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 499 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 558
Query: 566 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 624
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 559 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 615
Query: 625 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 682
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 616 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 675
Query: 683 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 742
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 676 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 734
Query: 743 KVVTVDRSMISDNVVVSTPYRYIELFFILFYHFLMLKLTVHVIMFCSDTPRYGMGSETPM 802
+ ++VDR ++ V P M M+ S TP YG GS TPM
Sbjct: 735 QTISVDRQRLT-TVDSQRPGG-------------MTSTYGRTPMYGSQTPMYGSGSRTPM 780
Query: 803 HPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDG 853
+ S+TPL TP+HDG RTP + AW+P P +P R D+
Sbjct: 781 YGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTP 840
Query: 854 NPGSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTP 887
+P ++G +PQY P +P + A Y AP+P + +P
Sbjct: 841 SPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSP 900
Query: 888 GGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GG 944
P + ++P+ Y P TP PM AS P G PMTPG GG
Sbjct: 901 SPQSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGG 956
Query: 945 LDAMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGN 997
+ +P G + N W DI V+ + +V GVIR V G C V L S
Sbjct: 957 YNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEK 1015
Query: 998 GDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDM 1056
+I++ +E + P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++
Sbjct: 1016 VVSISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNL 1073
Query: 1057 AILAKLAQ 1064
L KL +
Sbjct: 1074 RFLGKLLE 1081
>sp|Q5ZI08|SPT5H_CHICK Transcription elongation factor SPT5 OS=Gallus gallus GN=SUPT5H PE=2
SV=1
Length = 1079
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 354/1028 (34%), Positives = 542/1028 (52%), Gaps = 110/1028 (10%)
Query: 100 DEEEDEEEGEDDFIVDGGAELPDEDGGRGIHRRPLLPREDEQEDVEALERRIQARYARSS 159
++EE E D+ ++D D G R + L R+ +E+ L +YA+SS
Sbjct: 98 EKEEIEASNIDNVVLD-----EDRSGARRLQN---LWRDQREEE---LGEYYMKKYAKSS 146
Query: 160 --HTEY---DEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCID---KGSE 211
T Y DE + D+ QQ LLP V+DP LW VKC IG ER A+ LM+K I +
Sbjct: 147 VGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAIALMRKFIAYQFTDTP 206
Query: 212 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 267
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 207 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQ--MVPIKEMTDVLKVV 264
Query: 268 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 326
+ +L +WVR+K G YK D+A+V V+ + ++++K+IPRID + ++ ++ A
Sbjct: 265 KEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFA 324
Query: 327 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 385
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 325 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 379
Query: 386 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 445
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 380 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 437
Query: 446 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 505
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 438 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 497
Query: 506 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 565
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 498 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 557
Query: 566 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 624
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 558 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 614
Query: 625 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI--PQS 682
+RG F+H + +E+ G K+ V+ GGS+ R+ ++ + PRI P
Sbjct: 615 FRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKP---RDVTNFTVGSFAPMSPRISSPMH 671
Query: 683 PGRYSRGGPPAGGRNRGGRGGHDA-LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 741
P + G GG GRG D L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 672 PSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHST 731
Query: 742 MKVVTVDRSMISDNVVVSTPYRYIELFFILFYHFLMLKLTVHVIMFCSDTPRYGMGSETP 801
+ ++VDR ++ V P M M+ S TP YG GS TP
Sbjct: 732 CQTISVDRQRLT-TVGSRRPGG-------------MTSTYGRTPMYGSQTPMYGSGSRTP 777
Query: 802 MHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR--DNWEDG------ 853
M+ S+TPLH TP+HDG RTP + AW+P P +P R +++E G
Sbjct: 778 MYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPT 837
Query: 854 -NPGSWGTSPQYQ-PGSP-PS-----RAYEAPTPG----------SGWA-STPGGNYSDA 894
+P +G +P Q PG P PS + Y TPG S +A +P G+Y +
Sbjct: 838 PSPQGYGGTPNPQTPGYPDPSSPQVTQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPS 897
Query: 895 GTPRDSSSTYVNAPSP------YLPST--PGGQPMTPNSASYLPGTPGGQPMTPGT---G 943
+P+ S + APSP + P++ P PM AS P G PMTPG G
Sbjct: 898 PSPQ---SYHQVAPSPVGYQNTHSPASYHPTPSPMA-YQASPSPSPVGYSPMTPGAPSPG 953
Query: 944 GLDAMSPVIGADNEGP-WFMPDILVR------RSGEESVVGVIREVLPDGSCRVVLGSSG 996
G + +P G + W DI V+ S GVIR V G C V L S
Sbjct: 954 GYNPHTPGSGIEQSSSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVT-GGMCSVYLKDSE 1012
Query: 997 NGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDM 1056
+I++ +E V P K++K+K++ G R ATG L+ +DG DGIV++D+ +KIL++
Sbjct: 1013 KVVSISS--EHLEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLDEQLKILNL 1070
Query: 1057 AILAKLAQ 1064
L KL +
Sbjct: 1071 RFLGKLLE 1078
>sp|O00267|SPT5H_HUMAN Transcription elongation factor SPT5 OS=Homo sapiens GN=SUPT5H PE=1
SV=1
Length = 1087
Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust.
Identities = 343/1039 (33%), Positives = 525/1039 (50%), Gaps = 127/1039 (12%)
Query: 100 DEEEDEEEGEDDFIVDGGAELPDEDGGRGIHRRPLLPREDEQEDVEALERRIQARYARSS 159
++EE E D+ ++D D G R + L R+ +E+ L +YA+SS
Sbjct: 101 EKEEIEASNIDNVVLD-----EDRSGARRLQN---LWRDQREEE---LGEYYMKKYAKSS 149
Query: 160 --HTEY---DEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCID---KGSE 211
T Y DE + D+ QQ LLP V+DP LW VKC IG ER A+ LM+K I +
Sbjct: 150 VGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTP 209
Query: 212 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 267
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 268 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 326
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 327 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 385
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 386 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 445
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 446 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 505
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 506 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 565
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 566 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 624
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 625 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 684
+R F+H + +E+ G K+ V+ GGS+ D F P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPR-DVTNFTVGGF--------APMSPR 668
Query: 685 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 730
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 731 GQSVRVELESQMKVVTVDRSMISDNVVVSTPYRYIELFFILFYHFLMLKLTVHVIMFCSD 790
+ RVEL S + ++VDR ++ V P M M+ S
Sbjct: 729 ESTARVELHSTCQTISVDRQRLT-TVGSRRPGG-------------MTSTYGRTPMYGSQ 774
Query: 791 TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR--- 847
TP YG GS TPM+ S+TPL TP+HDG RTP + AW+P P +P R
Sbjct: 775 TPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEE 834
Query: 848 ------DNWEDGNPGSWG-----------------TSPQYQPGSPPSRA---------YE 875
D+ +P ++G +PQY P +P + A Y
Sbjct: 835 EYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYA 894
Query: 876 APTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGG 935
AP+P + +P P + ++P+ Y P TP PM AS P G
Sbjct: 895 APSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGY 950
Query: 936 QPMTPGT---GGLDAMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPD 985
PMTPG GG + +P G + N W DI V+ + VV GVIR V
Sbjct: 951 SPMTPGAPSPGGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-G 1009
Query: 986 GSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKV 1045
G C V L S +I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++
Sbjct: 1010 GMCSVYLKDSEKVVSISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRM 1067
Query: 1046 DVSLDVKILDMAILAKLAQ 1064
D+ +KIL++ L KL +
Sbjct: 1068 DLDEQLKILNLRFLGKLLE 1086
>sp|Q5R405|SPT5H_PONAB Transcription elongation factor SPT5 OS=Pongo abelii GN=SUPT5H PE=2
SV=1
Length = 1083
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 333/994 (33%), Positives = 505/994 (50%), Gaps = 116/994 (11%)
Query: 145 EALERRIQARYARSS--HTEY---DEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAV 199
E L +YA+SS T Y DE + D+ QQ LLP V+DP LW VKC IG ER A+
Sbjct: 131 EELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAI 190
Query: 200 CLMQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKV 252
LM+K I + LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+
Sbjct: 191 SLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ- 249
Query: 253 MLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID 312
+VPI+EMTDVL V + +L +WVR+K G YK D+A+V V+ + +++K+IPRID
Sbjct: 250 -MVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRID 308
Query: 313 LQALANKLEGRE-VAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF 370
+ ++ ++ AK+K F PP R + ++ R L V GD+ G
Sbjct: 309 YDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYS 363
Query: 371 KDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDA 430
+ GFL+K+ +M ++ + ++PT ELEKF E + ++ + ST ++ +F GD
Sbjct: 364 RKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTEST--GREREHNFQPGDN 421
Query: 431 VIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ 490
V V +G+L NL+G + VD + I P+ + L L ++EL KYF+ G+HVKV++G
Sbjct: 422 VEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRF 481
Query: 491 AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN 550
G TG++++VE++ +I+ SD T +++V D+ SE +G+ G +E +LV LD
Sbjct: 482 EGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQ 541
Query: 551 SFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRI 609
+ GVI+R+E E FQVL +V V+ + + K + + V D +N + VKD+V++
Sbjct: 542 TVGVIVRLERETFQVLNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKV 598
Query: 610 VEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR 669
++GP G++G + H++R F+H + +E+ G K+ V+ GGS+ D
Sbjct: 599 IDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPR-DVTNFTVGG 657
Query: 670 FNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVR 715
F P SP S P AGG+ G + L+G TV++
Sbjct: 658 F--------APMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRIS 709
Query: 716 LGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRYIELFFILFYHF 775
GPYKGY G V D + RVEL S + ++VDR ++ V P
Sbjct: 710 QGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLT-TVGSRRPGG------------ 756
Query: 776 LMLKLTVHVIMFCSDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDR 835
M M+ S TP YG GS TPM+ S+TPL TP+HDG RTP +
Sbjct: 757 -MTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSG 815
Query: 836 AWNPYTPMSPPR---------DNWEDGNPGSWG-----------------TSPQYQPGSP 869
AW+P P +P R D+ +P ++G +PQY P +P
Sbjct: 816 AWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTP 875
Query: 870 PSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQP 920
+ A Y AP+P + +P P + ++P+ Y P TP P
Sbjct: 876 GTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHP-TP--SP 932
Query: 921 MTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NEGPWFMPDILVRRSG---EE 973
M AS P G PMTPG GG + +P G + N W DI V+ +
Sbjct: 933 MA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDT 991
Query: 974 SVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGAT 1030
VV GVIR V G C V L S +I++ +E + P K +K+K++ G R AT
Sbjct: 992 QVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPITPTKNNKVKVILGEDREAT 1048
Query: 1031 GKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 1064
G L+ +DG DGIV++D +KIL++ L KL +
Sbjct: 1049 GVLLSIDGEDGIVRMDPDEQLKILNLRFLGKLLE 1082
>sp|Q9DDT5|SPT5H_DANRE Transcription elongation factor SPT5 OS=Danio rerio GN=supt5h PE=1
SV=1
Length = 1084
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 334/990 (33%), Positives = 510/990 (51%), Gaps = 113/990 (11%)
Query: 145 EALERRIQARYARSSHTEY-----DEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAV 199
EAL +YA+SS E+ ++ + D+ QQ LLP V+DP LW VKC IG ER A+
Sbjct: 134 EALGEYYMRKYAKSSGGEHFYGGSEDLSDDITQQQLLPGVKDPNLWTVKCKIGEERATAI 193
Query: 200 CLMQK-----CIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQ 250
LM+K C D + LQI+SV+A +H+K YIY+EA K+ HVK A +G+ N+ ++Q
Sbjct: 194 SLMRKFVAYQCTD--TPLQIKSVVAPEHVKGYIYVEAYKQTHVKAAIEGVGNLRMGFWNQ 251
Query: 251 KVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPR 310
+ +VPI+EMTDVL V + +L +WVR+K G YK D+A+V V+ + +++K+IPR
Sbjct: 252 Q--MVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQNTISLKMIPR 309
Query: 311 IDLQALANKLEGRE-VAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGM 368
IDL + ++ ++ AK+K F PP R + ++ R L V GD+
Sbjct: 310 IDLDRIKARMSMKDWFAKRKKFKRPPQRLFDAEKIRSLGGEVSH-----DGDFMIFEANR 364
Query: 369 LFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKG 428
+ GFL+K+ +M ++ + ++PT ELEKF E + ++ + +T ++ + G
Sbjct: 365 YSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTETT--GKEREHNLQAG 422
Query: 429 DAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSG 488
D V V +G+L NL+G + VD + I P+ + L L + EL KYF G+HVKV++G
Sbjct: 423 DNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKVIAG 482
Query: 489 TQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLD 548
G TG++++VE++ +I+ SD T +++V D+ SE +G+ G +E +LV LD
Sbjct: 483 RYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELVQLD 542
Query: 549 NNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVV 607
+ GVI+R+E E FQVL +V V+ + + + + + V D +N + VKD+V
Sbjct: 543 PQTVGVIVRLERETFQVLNM---HGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHVKDIV 599
Query: 608 RIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAY 667
++++GP G++G + HI+RG F+H + +E+ G K+ V+ GGS+ R+ +
Sbjct: 600 KVIDGPHSGREGEIRHIFRGFAFLHCKKLVENGGMFVCKARHLVLAGGSKP---RDVTNF 656
Query: 668 SRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGH--------DALVGTTVKVRLGPY 719
+ PRI SP GG P G GG GG + L+G TV++ GPY
Sbjct: 657 TVGGFAPMSPRI-SSPMHPGGGGQPQRGGGGGGGGGMGRGRGRRDNDLIGQTVRISQGPY 715
Query: 720 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRYIELFFILFYHFLMLK 779
KGY G V D + RVEL S + ++VDR ++ V R +
Sbjct: 716 KGYIGVVKDATESTARVELHSTCQTISVDRQRLT---TVGGKER-------------QGR 759
Query: 780 LTVHV--IMFCSDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAW 837
+ H+ M+ S TP YG GS TPM+ S+TPLH TP+HDG RTP + AW
Sbjct: 760 SSTHLRTPMYGSQTPIYGTGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAW 819
Query: 838 NPYTPMSP--PRDNWEDG----------------NPGSWG--------TSPQYQPGSPPS 871
+P P +P P D +E NP + G +PQY P +P +
Sbjct: 820 DPNNPNTPSRPDDEYEFAYDDEPSPSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGT 879
Query: 872 RA---------YEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMT 922
A Y AP+P + +P P ++P+ Y P TP PM
Sbjct: 880 PAMYNTDQYSPYAAPSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHP-TP--SPMA 936
Query: 923 PNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGADN-EGPWFMPDILVR------RSGE 972
AS P G PMTPG GG + +P D W DI+VR G
Sbjct: 937 -YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSNIDQASNDWVTTDIMVRVKDTFLDGGV 995
Query: 973 ESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGK 1032
+ G+IR V G C V L + +I++ +E V P K +K+K++ G R ATG
Sbjct: 996 INQTGIIRSVT-GGMCSVFLQDTEKVVSISS--EHLEPVTPTKNNKVKVILGEDREATGV 1052
Query: 1033 LIGVDGTDGIVKVDVSLDVKILDMAILAKL 1062
L+ +DG DGIV++++ +KIL++ L KL
Sbjct: 1053 LLSIDGEDGIVRMELDEQLKILNLRFLGKL 1082
>sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5 OS=Drosophila melanogaster
GN=Spt5 PE=1 SV=1
Length = 1078
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 302/973 (31%), Positives = 477/973 (49%), Gaps = 94/973 (9%)
Query: 129 IHRRPLLPREDEQEDVEALERRIQARYARSSHTEY------DEETTDVEQQALLPSVRDP 182
I RR + ++ED +E ++ +YA S + +E + ++ QQ LLP ++DP
Sbjct: 157 IRRRGTNLWDTQKED--EIEEYLRKKYADESIAKRHFGDGGEEMSDEITQQTLLPGIKDP 214
Query: 183 KLWMVKCAIGREREAAVCLMQKCI---DKGSELQIRSVIALDHLKNYIYIEADKEAHVKE 239
LWMVKC IG E+ A+ LM+K + + LQI+S+IA + +K YIY+EA K+ HVK
Sbjct: 215 NLWMVKCRIGEEKATALLLMRKYLTYLNTDDPLQIKSIIAPEGVKGYIYLEAYKQTHVKT 274
Query: 240 ACKGLRNIY--SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVD 297
+ N+ K +VPI+EMTDVL V + + L WVR+K G YK D+A+V VD
Sbjct: 275 CIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKEQVGLKVKQWVRLKRGLYKDDIAQVDYVD 334
Query: 298 NVRQRVTVKLIPRIDLQALANKL-----EGREVAKKKPFVPPPRFMNVDEARELHIRVER 352
+ +V +KL+PRID + L E + +KK P + + + R + V
Sbjct: 335 LAQNQVHLKLLPRIDYTRMRGALRTTATESDDSKRKKKRRPAAKPFDPEAVRAIGGEVHS 394
Query: 353 RRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIAS 412
GD+ G + GFLYK +M +I + ++PT ELE+F E E ++
Sbjct: 395 -----DGDFLLFEGNRYSRKGFLYKNFTMSAILSDGVKPTLAELERFEESPE--EVNLEI 447
Query: 413 LSTLFANRKKGH-FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSK 471
+ T+ + H F GD V V GDL+NL+ + +D + + P+ + L L +
Sbjct: 448 MGTVKDDPTMAHSFSMGDNVEVCVGDLENLQAKIVAIDGTMITVMPKHQDLKDPLIFKAS 507
Query: 472 ELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTT 531
EL KYF+ G+H +V++G G TG++++VE ++++SD T ++ V D+ S+V T
Sbjct: 508 ELRKYFKTGDHARVLAGRYEGETGLIIRVEPTRVVLVSDLTNHELEVLPRDLQLCSDVAT 567
Query: 532 GITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL----KGVPDRPEVALVKLREIKCKL 587
G+ +G ++ D+V LD+ + GVI+R+E E F VL K + +P AL K +E
Sbjct: 568 GVDCLGQFQWGDMVQLDSQNVGVIVRLERENFHVLGMNGKCIECKP-TALHKRKE----- 621
Query: 588 EKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKS 647
+ + D ++N + +DVV+++EGP G+ G ++H+YR + F+H R + E+ G K+
Sbjct: 622 NRHTVALDADQNQIRRRDVVKVMEGPHAGRSGEIKHLYRSLAFLHCRMYTENGGIFVCKT 681
Query: 648 SSCVVVGGSRANGDRNGDAYSR-FNSLRTPPRI--PQSPGRYSRGGPPAGGRNRGGRGGH 704
+ GGS+ G F S PRI P P A G G R
Sbjct: 682 RHLQLAGGSKTTVSNAGIVGGLGFMS----PRIQSPMHPSGGRGARGGARGGRGGFRVTR 737
Query: 705 D-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYR 763
D ++G T+K+ GPYKG G V D + RVEL + + ++VDR+ I+ V V+
Sbjct: 738 DREILGKTIKISGGPYKGAVGIVKDATESTARVELHTSCQTISVDRNHIAI-VGVTGKEG 796
Query: 764 YIELFFILFYHFLMLKLTVHVIMFCSDTPRY-GMGSETPMHPSRTPLHPYMTPMRDAGAT 822
+ + + + + TP Y GS+TP+ S+TP T T
Sbjct: 797 SVSTYG---------RTPARTPGYGAQTPSYTAAGSKTPLVGSQTPNWDTDTRTPYGTMT 847
Query: 823 PIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPP---SRAYEAPTP 879
P HDG TP R AW+P +P R+N D + SP Y P +P + + TP
Sbjct: 848 PSHDGSMTP-RHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPGYQMTSQFAPQTP 906
Query: 880 GSGWASTPGGNYSDAGTPRDSSST---YVNAPSP--YLPSTPGGQPMTPNSASYLPGTPG 934
G+ + S + + S Y+N PSP Y P+TPGG P +P Y P TPG
Sbjct: 907 GTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTPGGIPQSP----YNPQTPG 962
Query: 935 GQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEESV-----VGVIREVLPDGSCR 989
LD+ + G W DI VR + G+IR V +G C
Sbjct: 963 AS--------LDS--------SMGDWCTTDIEVRIHTHDDTDLVGQTGIIRTV-SNGVCS 1005
Query: 990 VVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSL 1049
V L +++ + + V P D+ KI+ G R + G+++ DG + +++
Sbjct: 1006 VFLRQEDR--SVSIVSEHLAPVLPCNGDEFKIIYGDDRESVGRVLSKDGDVFVCRINE-- 1061
Query: 1050 DVKILDMAILAKL 1062
++K+L + L K+
Sbjct: 1062 EIKLLPINFLCKM 1074
>sp|Q21338|SPT5H_CAEEL Transcription elongation factor SPT5 OS=Caenorhabditis elegans
GN=spt-5 PE=3 SV=3
Length = 1208
Score = 313 bits (801), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 259/823 (31%), Positives = 400/823 (48%), Gaps = 89/823 (10%)
Query: 161 TEYDEETT---DVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCI---DKGSELQI 214
++YD+E + D+ + + LPS +DP LW+VKC +G E+ A+ LM+KC+ QI
Sbjct: 159 SQYDDEDSAMDDISKNSHLPSTKDPNLWIVKCRMGEEKLVAMHLMRKCLAVEHTNEPFQI 218
Query: 215 RSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDLS 274
+SV+ + LK IYIEA K++HV A +G + + +VPI++M DVL V L
Sbjct: 219 KSVVVKEGLKGMIYIEAFKQSHVMSAIEGFSALNQFTITMVPIKDMVDVLRVVKDIPQLK 278
Query: 275 RDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ----ALANKLEGREVAKKKP 330
++VR+K YK DLA V VD + RV +KLIPR+D Q A+ + K++P
Sbjct: 279 LGSYVRLKRTMYKDDLAVVDLVDIAQNRVNLKLIPRVDYQKRRGAMRTDADKNYKLKRRP 338
Query: 331 FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQ 390
P+ + D +E+ + +T F G F+ GFLYK + +I A ++
Sbjct: 339 M---PKLFDQDTIKEVGGEI------VTDGDFLVFEGNHFRRGFLYKYFPINAIQADGVK 389
Query: 391 PTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDE 450
PT ELEKF+ E+ + L T + F+ GD V V G+L NL+G V VD
Sbjct: 390 PTLGELEKFQ---ESSDDLKRELETASLKDTENPFVPGDIVEVKAGELVNLRGKVMTVDG 446
Query: 451 ENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSD 510
V + P+ + L + + +N+ EL KYF+ G+H KV+SG G TG++++V+ I+LSD
Sbjct: 447 TKVVMMPDQEDLKEAITLNAHELRKYFKEGDHAKVISGRYEGHTGLIVRVKDSTAIVLSD 506
Query: 511 TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN-SFGVIIRVESEAFQVLK-- 567
E+++V D+ ++VTTG+ +G ++ DLV LD+ + GVI+R+E E +VL
Sbjct: 507 LGMEELKVRVRDLQLCADVTTGVDSLGQFQYHDLVQLDHTGNVGVIVRLEKEHLEVLNMH 566
Query: 568 GVPDRPEVALVKLREIKCKLEKK-SNVQDRNKNTVAVKDVVRIVEGPCKGKQ-------G 619
GV +R +K + I K + + + V D N++ KD+V+++ GP ++ G
Sbjct: 567 GVVNR-----IKPQAIIAKKDVRFAKVLDSQNNSIEAKDLVKVIGGPNAKERETDEDPVG 621
Query: 620 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN--------GDRNGDAYSRFN 671
V + +RG +F++ R ++ G + K ++ G + N A R +
Sbjct: 622 EVLYAFRGTVFVYSRKVTKNGGVLVCKPKQLILQGAKKTTSTPMVSRMASPNPMASPRHS 681
Query: 672 SLRTPPRIPQ--------------SPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 717
S PR PQ G G G N+ L+G V++ G
Sbjct: 682 SGGMTPRSPQDGMSSRGSSGGQTPRQGGGGGRGGHFGTANQQKVRRDLTLIGKNVRIIKG 741
Query: 718 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRYIELFFILFYHFLM 777
P KG+ G V D +VRVEL +Q + ++VDR+ + VV T +
Sbjct: 742 PMKGHFGIVRDATEDTVRVELHTQCRTISVDRARVM--VVGDT-----GITAGSGGGSSF 794
Query: 778 LKLTVHVIMFCSDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIH-DGMRTPMRDRA 836
+ + TP Y GS+TPM+ ++TP++ MTP D G TP + +G RTP A
Sbjct: 795 YSSSKTPMRDSGKTPMY--GSKTPMYGAQTPMYGSMTPAYDGGRTPAYGEGGRTP----A 848
Query: 837 WNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAY----EAPTPGSGWASTPGGNYS 892
+ TP + D + S +P Y S + AY A TP G ST GG
Sbjct: 849 YGSKTPA------YGDLDEHSSSRTPAYGNDSSRTPAYGSADGARTPAYG--STEGGRTP 900
Query: 893 DAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPN--SASYLPGTP 933
G+ D+S T S P TPN S+S P P
Sbjct: 901 AYGS-MDNSRTPAYDDSGRTPGYESMPSRTPNYDSSSKTPAYP 942
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 148/346 (42%), Gaps = 86/346 (24%)
Query: 788 CSDTPRYGM--GSETPMHPS----RTPLHPYMTPMR-----DAGATPIHDGM--RTPMRD 834
S TP YG G+ TP + S RTP + M R D+G TP ++ M RTP D
Sbjct: 874 SSRTPAYGSADGARTPAYGSTEGGRTPAYGSMDNSRTPAYDDSGRTPGYESMPSRTPNYD 933
Query: 835 RAWNPYTPMSPPRDNWED----GNPGSWGTSPQYQPGSP------PSR--AYEAPTPGSG 882
+ TP P ++ N SP Y+P +P P+R A+ + TPG
Sbjct: 934 SSSK--TPAYPESEHSARTPAYNNDYDIPLSPAYEPDAPEAYDNAPARTPAFVSRTPGYD 991
Query: 883 WASTPGGNYS-DAGTPRD------SSSTYVNAPSPYLPSTPGG--QPMTPNSASYLPGTP 933
Y DA T + SS TY + P Y+ TPG P TP +Y TP
Sbjct: 992 TYENSSPTYEPDAATKVEEDIGDTSSPTYDSPPHSYVVPTPGAMLNPATP--GAYHVDTP 1049
Query: 934 G-GQPMTPGTGG----LDAMSPVIGADN-------------------EGPWFMPDILV-- 967
G PMTPG+GG A SP G D+ +G W + ++ V
Sbjct: 1050 GFAAPMTPGSGGAYDQYVAPSPFAGYDSNNYNNADGAIEQIPDHFLAQGVWIVQNLCVQI 1109
Query: 968 -----RRSGEESVV-----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTD 1017
R +G E+++ G + +PD C + + + D +T + P+ D
Sbjct: 1110 KDHEGRFNGREAIIKDVTDGKVDVYMPDHKCNLEV----DFDQLTPM-------KPQPGD 1158
Query: 1018 KIKIMGGPHRGATGKLIGVDGTDGIVKVDVSL-DVKILDMAILAKL 1062
+++ G G +G+L+ +DG + +++ + D++++++ + K+
Sbjct: 1159 DARVIFGQDAGHSGQLVSMDGFEAVIRSQEDMSDMRVINIGLCCKM 1204
>sp|Q4PIC4|SPT5_USTMA Transcription elongation factor SPT5 OS=Ustilago maydis (strain 521
/ FGSC 9021) GN=SPT5 PE=3 SV=1
Length = 1057
Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 203/644 (31%), Positives = 335/644 (52%), Gaps = 51/644 (7%)
Query: 137 REDEQEDVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKLWMVKCAIGRERE 196
R++E + EAL ++ RY RS+ + +V Q+ L+PSV DP LW V C GRER+
Sbjct: 260 RQEEDTNAEALAEELRQRYGRSARYAAQSDYAEVPQRLLMPSVEDPSLWGVPCKPGRERD 319
Query: 197 AAVCLMQKCIDKG---SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK-- 251
+ L++K + + S ++I S D + +Y+EA + V +AC GL Y+++
Sbjct: 320 IVMTLVRKAMAENFTSSPMRIISAFCRDSIPGRVYVEARRADDVVKACNGLAGAYARQTT 379
Query: 252 -VMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPR 310
+ L+PI EM D+L ++ ++ WVR+K G Y GDLA+V+DV + V +K+IPR
Sbjct: 380 SLHLIPISEMADLLKLQKVQNEIQVGGWVRIKRGKYAGDLAQVLDVSENGEEVGLKMIPR 439
Query: 311 IDLQALANKLEGREVAKKK-----------PFVPPPRFMNVDEARELHIR-VERRRDPMT 358
IDL + L + +K+ F PP RF N +E ++ + R +R
Sbjct: 440 IDLNPKDSGLYTDSLGRKRKKGAGSSATTVAFRPPQRFFNPEEVQKAYPRDTPTKRGSQW 499
Query: 359 GDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGEN---------GESD 409
F+N ++DG+L K V + I +N+ PT DE+ KF GE+ G D
Sbjct: 500 --VFQNDS---YRDGYLEKDVRVTGIITENVNPTLDEITKF--AGESSIEDGINKLGAVD 552
Query: 410 IASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAV 468
++ ++ + D V + +G+ + G V+ ++ E + I+ E + L + + V
Sbjct: 553 LSLIADASKKATEALIQPKDQVEIFEGEQAGVYGTVKAINNEVITIQLEHEDLMDQIVEV 612
Query: 469 NSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSE 528
++ + K F+PG+H+KV+SG A TG+V+KVE +V LSD + +++ VF+ D+ +++E
Sbjct: 613 PARSVRKRFKPGDHIKVMSGKHADETGLVVKVEDNVTTFLSDLSMQEVSVFSKDIRQAAE 672
Query: 529 VTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE 588
V +G+ I YEL +LV LD + G+I +E E+F+VL +V VK +I K +
Sbjct: 673 VGSGVNVISGYELHNLVQLDAQTVGIIFNIERESFKVLD---QTGQVVTVKPHQISTKKD 729
Query: 589 -KKSNVQDRNKNTVAVKDVVRIVEGP-CKGKQGPVEHIYRG-ILFIHDRHHLEHAGFICA 645
++ D + N + D+V+ V GP + +QG V HIY+ ++F+H+R + E+ G A
Sbjct: 730 TSRAFALDHDGNEIRAGDMVKEVAGPFSRLRQGQVLHIYQSMVVFLHNREYTENGGVFIA 789
Query: 646 KSSSC--VVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGG 703
++ S + ++G S+ N P + G + G R GGR
Sbjct: 790 RARSLEPLAPKSVSTKTKKDGGDLSKMN-----PALSNLSGGGANDVRVEGVRRFGGRDM 844
Query: 704 HDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTV 747
H G V + GPYK YRGR+ + G R+EL S K +TV
Sbjct: 845 HK---GKNVAIIKGPYKTYRGRITETTGNMARIELTSVSKPITV 885
>sp|O13936|SPT5_SCHPO Transcription elongation factor spt5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spt5 PE=1 SV=1
Length = 990
Score = 293 bits (750), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 260/854 (30%), Positives = 405/854 (47%), Gaps = 102/854 (11%)
Query: 130 HRRPLLPREDEQE-DVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKLWMVK 188
HR R++ Q D E L + +Y RS D T++V Q+ LLPSV DP +W V+
Sbjct: 189 HRELDRQRQELQSVDAERLAEEYREKYGRSQTVVGD--TSNVPQRLLLPSVNDPNIWAVR 246
Query: 189 CAIGREREAAVCLMQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLR 245
C IG+E++ +M+K +D S L+I S D L YIY+EA K++HV +A G+
Sbjct: 247 CKIGKEKDIVFTIMRKAMDLQYTSSPLEIISAFQRDSLVGYIYVEARKQSHVLDALNGVL 306
Query: 246 NIYSQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTV 305
N+Y+ ++LVPI+EM D+L V+ + ++L +VR++ G Y GDLA+V ++ V
Sbjct: 307 NVYTNNMILVPIKEMPDLLKVQKQVVELLPGAYVRIRRGKYAGDLAQVDNLSENGLTARV 366
Query: 306 KLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENI 365
+++PRID ++ L+ + A + P R N EA + + +R P F N
Sbjct: 367 RIVPRID---YSDGLKRKNSATR----PQARLFNESEAFKSNPSKFSKRGPRLF-LFNN- 417
Query: 366 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH- 424
F+DGFL K + + S+ + + PT DE+ KF N ++ LS+L + K GH
Sbjct: 418 --EEFEDGFLVKDIRISSLITEGVNPTLDEVSKF-----NPNNEDLDLSSLALSVKGGHA 470
Query: 425 -FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHV 483
F GD V V G+ + G VE V +V GL L V S+ L K F G++V
Sbjct: 471 EFQPGDHVEVYVGEQTGVSGVVENV-RGSVITMVSSDGL--RLDVPSRGLRKRFRHGDYV 527
Query: 484 KVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRD 543
KV++G TGMV+++ + + LSDT ++ VF+ D+ E+S + YEL D
Sbjct: 528 KVIAGKYKDDTGMVVRISKDEVTFLSDTLMTELTVFSRDLGEASSAQAVNSA---YELHD 584
Query: 544 LVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTVA 602
LV LD N+ I V+ + ++V+ V V +I + + V DRN +
Sbjct: 585 LVQLDVNTVACIFSVDRDTYKVID---QNGGVRTVLASQITMRHSNRRGVATDRNGAEIR 641
Query: 603 VKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 662
+ D V+ V G +GKQG + HIYR +F+H+R E+ G A+S + + A G R
Sbjct: 642 IGDKVKEVGG--EGKQGTILHIYRAFVFLHNRDIAENNGVFSARSRNVATIA---AKGAR 696
Query: 663 NGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGY 722
++ N P + P PP R G D +G TV++R GP KG
Sbjct: 697 ISADLTKMN-----PALSNGPAL-----PPVANLKR--TIGRDKAIGATVRIRRGPMKGL 744
Query: 723 RGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRYIELFFILFYHFLMLKLTV 782
G + D + RVEL + K+VT+ + +N++ +T + EL I + F+ +
Sbjct: 745 LGVIKDTTDANARVELHTGNKMVTIPK----ENLLYTT--KTGEL--ISYTEFIERSRGI 796
Query: 783 HVIMFCS----DTPRYGMGSETP--MHPSRTPLHPY--MTPMRDAGA-TPI-HDGMRTPM 832
+ + P + G+ TP + SRTP TP ++G+ TP + G RTP
Sbjct: 797 RPGSISTADGPNVPNWAQGARTPAVANGSRTPAWNTGSRTPAWNSGSKTPAWNSGSRTPA 856
Query: 833 RDR-----AWN-----PYTPMSPPRDNWEDGNPG-SWGT---SPQYQPG----------- 867
+ AWN P W GN +W + +P + G
Sbjct: 857 WNSGNKTPAWNAGSRTPAWNSGNKTPAWNVGNKTPAWNSGAKTPAWNAGNKTPSWNNGTK 916
Query: 868 SPPSRAYEAPTPGSG----WASTPG-GNYSDAGTPRDSSSTYVNAPSP--YLPSTPGGQ- 919
+P A + P +G W TP G +S+ + +S AP+P + TPGG
Sbjct: 917 TPAWNANQTPMVANGTNTSWGQTPAYGGFSETNWDTEDNSKPYTAPTPGAWAAPTPGGWD 976
Query: 920 PMTPNSASYLPGTP 933
+S Y+P +P
Sbjct: 977 DEEGDSPKYVPPSP 990
>sp|Q6CC84|SPT5_YARLI Transcription elongation factor SPT5 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=SPT5 PE=3 SV=1
Length = 980
Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 269/878 (30%), Positives = 406/878 (46%), Gaps = 108/878 (12%)
Query: 108 GEDDFIVDGGAELPDEDGGRGIHRRPLLPRED-EQEDVEALERRIQARYARSSHTEYDEE 166
GED F+ + A+ PD R HR RE +ED E L + +Y RS+ +Y +
Sbjct: 103 GEDGFVAEPDADEPDASDDR-FHREMDRRREAIAEEDAERLADEYREKYGRSTANKYRGD 161
Query: 167 TTDVEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCIDKGSELQ-------IRSVIA 219
+ + Q LLPSV +P +W ++C G+E+E L+++C+ K LQ I SV
Sbjct: 162 SGVIPQHLLLPSVNEPSIWGIRCKPGKEKE----LVRQCLRKKLSLQKSRNPLEIMSVFQ 217
Query: 220 LDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKAIDLSRDTW 278
D YIY+EA + V A KGL N+Y Q ++LVPI+E D+L A +S +L +
Sbjct: 218 RDTFTGYIYMEARNQQAVTVALKGLVNVYPQNMILVPIKEYVDLLRATKSAETELVPGAY 277
Query: 279 VRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANK-LEGREVAKKKPFVPPPRF 337
VR+K G Y GDLA V ++ V +KL+PR+D A ++G+ K+ +PPPR
Sbjct: 278 VRLKRGKYGGDLAIVENLSENGLEVRLKLVPRLDYGRNAEAGIDGKR--KRVARIPPPRL 335
Query: 338 MNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELE 397
+ EA + R ++R P Y G + GFLYK + ++A+N+ P +EL
Sbjct: 336 FSEQEASQYDPRNLQKRGPNAYVY----AGDEYIGGFLYKDFKITLVNAENVAPKLEELT 391
Query: 398 KFRTPGENGESDIASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR 456
+F + +G D+ASL+ +L + F GD V V +G+ ++G V + V +
Sbjct: 392 RFNSEETDG-IDLASLAQSLRKSAAAVQFQGGDVVEVSEGEQTGVQGTVISTHGDIVTVE 450
Query: 457 PEMKGL-PKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKED 515
L K + + S+ L K F G+HV+V+SG TG+++ +E + +LSD K++
Sbjct: 451 ATTAPLVGKRIDLPSRSLRKKFAIGDHVRVISGNFLDDTGLIVGLEDDSVTLLSDLNKKE 510
Query: 516 IRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEV 575
+ VFA D+ + S++ G ++GDYEL D V LD G I++VE ++ +VL V
Sbjct: 511 VTVFAKDLKKVSDIG-GSHQVGDYELHDFVQLDALHVGCIVKVERDSLKVLD---QEGTV 566
Query: 576 ALVKLREIKCKLEKKSN--VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHD 633
V I KL + D N + + + D VR G +G+QG V HIY+ LF+
Sbjct: 567 RSVTPSSITMKLTRNMEGLATDSNGSEIKIGDTVRETVG--EGRQGAVLHIYKNTLFLSS 624
Query: 634 RHHLEHAGFICAKS--SSCVVVGGSR--ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRG 689
R G AK+ + +V G+R +N G ++ N P PG+ +
Sbjct: 625 RS----LGVFVAKAFKVNTIVAKGARTQSNSQATGPDLTKMN----PAVYNARPGQMA-- 674
Query: 690 GPPAGGRNRGGRGGHDALVGTTVKVRLGP-YKGYRGRVVDVKGQSVRVELESQMKVVTVD 748
PP + +GG D L G V + G +KG +G V + RVEL + KVV V
Sbjct: 675 -PPVMPK----QGGFDRLKGKHVAIGPGSQHKGCKGIVKETTDDIARVELHAPCKVVNV- 728
Query: 749 RSMISDNVVVSTPYRYIELFFILFYHFLMLKLTVHVIMFCS------------------D 790
+ + + Y+ L ++ F ++
Sbjct: 729 ---LKHQLRIYDDYKKTYLSYMEFATPRGMRSGGGRPGGPPGPGGPGSGGQTPSWGGGGK 785
Query: 791 TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNW 850
TP +G G +TP S+TP GA G RTP A N +P
Sbjct: 786 TPSWGAGGKTPSWGSKTPSW--------GGAKTSSWGSRTP----AANAGGAQTPAWGAM 833
Query: 851 EDGNPGSWGTSPQYQP--GSPPSRAYEAP-----TPGSGWASTPGGNYSDAGTPRDSSS- 902
+ P SWG S P G + A+ A TP G A TP S AGT SSS
Sbjct: 834 GNKTP-SWGASESRTPAWGGAKTPAWGAAGAGSKTPAFGVARTPSWKSSSAGTYGGSSSR 892
Query: 903 --------TYVNAPSP-YLPSTPG---GQPMTPNSASY 928
+ +AP+P Y +TPG G P TP +A +
Sbjct: 893 NKGWEDLGSGNSAPTPGYAAATPGEMMGAP-TPGAAHH 929
>sp|Q4WP96|SPT5_ASPFU Transcription elongation factor spt5 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=spt5
PE=3 SV=1
Length = 1058
Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 258/866 (29%), Positives = 414/866 (47%), Gaps = 90/866 (10%)
Query: 130 HRRPLLPREDEQE---DVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKLWM 186
HR+ L R+ E E D E + ++ RY R+ D V ++ LLPSV DP +W
Sbjct: 190 HRQ--LDRQRELEASMDAEKQAQLLKERYGRNRAAATDAVV--VPKRLLLPSVDDPSIWG 245
Query: 187 VKCAIGREREAAVCLMQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHVKEAC 241
V+C G+ERE + ++ ++ GS IR + A + + YIY+EA ++A V EA
Sbjct: 246 VRCKAGKEREVVFAIQKRIEERPPGSRKPIRIISAFERGGAMSGYIYVEARRQADVMEAL 305
Query: 242 KGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVR 300
+ + N+Y + K++LVP+REM D+L V+ K+ +L+ WVR+K G Y+GDLA++ +VD
Sbjct: 306 EDMSNVYPRTKMILVPVREMPDLLRVQ-KSEELNPGGWVRIKRGKYQGDLAQIEEVDTNG 364
Query: 301 QRVTVKLIPRIDLQALANKLEGR---EVAKKKPFV------PPPRFMNVDEARELHIRVE 351
VTV+L+PR+D N+ G ++ +K+P + PP R + EA++ H +
Sbjct: 365 LDVTVRLVPRLDYGL--NEDSGAPVVDIKRKRPGMASGGPRPPQRLFSEAEAKKRHGKYL 422
Query: 352 RRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--D 409
+ G + +G + DGFL K + ++ + +N+ P +E+ F ++G S D
Sbjct: 423 SATSGLGGKSWSYLG-ETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARGSDDGTSNLD 481
Query: 410 IASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKT 465
+ASL+ TL + + ++ GD V V +G+ + L G + V ++ E+ G +
Sbjct: 482 LASLAETLKNSTAEESYLPGDPVEVFRGEQQGLVGRTTSTRGDIVTLQVTEGELAG--QM 539
Query: 466 LAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVV 524
+ K L K F G+HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+
Sbjct: 540 IEAPVKSLRKRFREGDHVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLR 599
Query: 525 ESSEVTTGI-TKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREI 583
S+E TG+ K+G +++ DLV LD ++ +++V+ E+ +VL + V +I
Sbjct: 600 LSAE--TGVDGKLGMFDVHDLVQLDASTVACVVKVDRESLRVLD---QNGSIRTVLPSQI 654
Query: 584 KCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAG 641
K+ + + DRN + + D VR + G + G + HIYR LF+H++ E++G
Sbjct: 655 ANKITPRRDAVATDRNGAEIRIGDTVRELYG--DQRSGVILHIYRSFLFLHNKAQAENSG 712
Query: 642 FICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGR 701
+ ++++ V V S G G ++ N IP + GPP
Sbjct: 713 IVVVRTTNVVTV--SAKGGRSTGPDLTKMNPALMRSGIPGA-----SMGPPKSF------ 759
Query: 702 GGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTP 761
GHD L+G TV+VR GPYKG G V D RVEL S+ K+VT+ + D ++V P
Sbjct: 760 -GHDRLIGKTVQVRKGPYKGLVGIVKDSTDVQARVELHSRNKLVTIPK----DVLIVKDP 814
Query: 762 YRYIELFFILFYHFLMLKLTVHVIMFCSDTPRYGM-GSETPMHP---SRTPLHPYMTPMR 817
L + K V S P G G TPM SRTP + R
Sbjct: 815 VTGQTL-------DMSRKGGQRVPYGASAAPPSGWSGGRTPMAAADSSRTPAWGGASSAR 867
Query: 818 DAGATPIHDGMRTPMRDRAWN-PYTPMSPPRDNWEDGNPGSWGTSPQYQPGS-------P 869
I G RTP AW + S P D G+ +P + G+
Sbjct: 868 TPAWAGIS-GSRTP----AWKMDGSRTSNPYDGSRTAYGGAGSRTPAWNAGARTPYDSGS 922
Query: 870 PSRAYEAPTPGS---GWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSA 926
S ++A GS W G + A + S+ + Y PGG P
Sbjct: 923 GSSGFDAFAAGSRTPAWGGANAGGRTPAWSASSSAGSGNRDSRGYDAPNPGGAYSAPTPG 982
Query: 927 SYLPGTPGGQPMTPGTGGLDAMSPVI 952
+Y TPG TPG A +P +
Sbjct: 983 AYTAPTPGASAPTPGAWADSAPTPGV 1008
>sp|P0CR70|SPT5_CRYNJ Transcription elongation factor SPT5 OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SPT5 PE=3 SV=1
Length = 1152
Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 256/905 (28%), Positives = 415/905 (45%), Gaps = 118/905 (13%)
Query: 119 ELPDEDGGRGIHRRPLLPR---EDEQEDVEALERRIQARYARSSHTEYDEETTDVEQQAL 175
E P++ G R H+ L R +E+EDV + +R++ R+A ++ Y+ ++ V Q+ L
Sbjct: 140 EAPEDVGARDDHQHRRLNRVFGRNEEEDVHDIVQRLKERHAGAAR--YNGDSDAVPQRLL 197
Query: 176 LPSVRDPKLWMVKCAIGREREAAVCLMQKCIDK---GSELQIRSVIALDHLKNYIYIEAD 232
+P V DP LW V GRE + +K + + + + SV D + I+IEA
Sbjct: 198 MPGVNDPSLWKVVVKSGREHAICASIFRKVFAQQYSANPIDVISVFCRDSIPGMIFIEAR 257
Query: 233 KEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLA 291
+ A V A G+ I+ S+ V LVPI EM +L ++ K ++L+ WVRMK G + GDLA
Sbjct: 258 QSASVSAAVNGIVGIFMSRGVNLVPIEEMAPLLKMKKKDVNLTPGMWVRMKRGKHAGDLA 317
Query: 292 KVVDVDNVRQRVT-VKLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRV 350
+VVDVD + V +K IPRIDL + E + K PP R D+ R+++ R
Sbjct: 318 QVVDVDQITSGVVGIKFIPRIDLTPREKRKERIAIGKPGGVRPPARLFAYDDVRKIYGRQ 377
Query: 351 ERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGEN-GESD 409
R+ F+N + DGF K V + +++ +++ PT +E+ +F ++ + D
Sbjct: 378 SVRQGAQGSYLFDND---EYVDGFCIKDVKIPAVATEDVNPTLEEISRFTGDDDSTAKFD 434
Query: 410 IASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAV 468
+++++ N GD + V +G+ L G VE V + + I+ E + +T+ V
Sbjct: 435 LSAIADANKNLSTSLLFPGDKIEVYEGEQTGLYGIVEAVSPDVIAIKAEGGEVHGQTVEV 494
Query: 469 NSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSE 528
++ + K F+ G HVKV+ G A+GMV++V+ ++ ++SD +++I+VF+ D+ ++++
Sbjct: 495 PARSVRKRFDVGEHVKVLGGKHTDASGMVVEVKGDIVTLMSDLGEQEIKVFSKDLRKAAD 554
Query: 529 VTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE 588
T G Y++ D+V+LD+ + GV+ +VE ++L V ++ + +
Sbjct: 555 TTNLTVTKGLYDVHDMVMLDSTTAGVVTKVEGGLLRILD---QNGAAKSVSPEQVSIRRD 611
Query: 589 KK--SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICA 645
K + D N + V D ++ +G +QG V +I+R I F+++R + ++ G A
Sbjct: 612 NKRFAVATDSQGNDMKVGDNMKETDGEM--RQGEVFNIFRSIFVFLYNREYTDNFGVFVA 669
Query: 646 KSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSP-GRYSRGGPPAGGRNRGGRGGH 704
+++S + V A D ++ N P Q P G S P NR
Sbjct: 670 RANSLISVTPKSAVND-----LTKIN----PALNQQLPYGGASLMPAPTANLNR------ 714
Query: 705 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI--SDNVVVSTPY 762
+ L+ T V V G KG G + DV+G++ RVEL+ K ++V+ + + D +T
Sbjct: 715 NRLINTLVVVTKGTSKGLIGVIKDVQGENARVELKHNNKTLSVNLASLKRKDQKTGAT-- 772
Query: 763 RYIELFFILFYHFLMLKLTVHVIMFCSDTPRYGM------GSETPMHPSRTPLHPYM--- 813
+ M + + + P G G T MHPS P +
Sbjct: 773 ----------FPLEMAGIASAAGGYGA-RPNAGQYDINPYGGATAMHPSMGGQTPALMGG 821
Query: 814 -TPMRDAGATP------IHDGMRTPMRDRAWNPYTP----MSPPRDNWEDGNPGSWGTS- 861
TP G TP + +G +TP NPY +P N G +WG S
Sbjct: 822 RTPAARFGQTPNPYAAGVQNG-KTP------NPYAAGVGGKTPSAANASGGKTPAWGASG 874
Query: 862 ---PQY-------------QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSS-TY 904
P Y Q G P+ AY PG TP Y G P S S
Sbjct: 875 GKTPAYGMASGGKTPAYGMQGGKTPN-AYAMAPPGPSGGRTPA--YGAYGRPEASGSRPS 931
Query: 905 VNAP------SPYLPSTPGGQ----PMTPNSASYLPGTPGGQPM-----TPGTGGLDAMS 949
V AP +PY TP G P P + P TP G P TPG L A +
Sbjct: 932 VMAPPSAPYSAPYSAPTPAGNGAPTPAIPGNPYTAP-TPYGAPTPYAAPTPGMPSLSAPT 990
Query: 950 PVIGA 954
P GA
Sbjct: 991 PGPGA 995
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 64/154 (41%), Gaps = 32/154 (20%)
Query: 791 TPRYGM--GSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRD 848
TP YGM G +TP + + TP A A P G RTP A+ Y
Sbjct: 877 TPAYGMASGGKTPAYG----MQGGKTPNAYAMAPPGPSGGRTP----AYGAY-------- 920
Query: 849 NWEDGNPGSWGTSPQYQ--PGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVN 906
G P + G+ P P +P S Y APTP A TP + G P + + Y
Sbjct: 921 ----GRPEASGSRPSVMAPPSAPYSAPYSAPTPAGNGAPTP----AIPGNPYTAPTPY-G 971
Query: 907 APSPYLPSTPGGQPM---TPNSASYLPGTPGGQP 937
AP+PY TPG + TP + + TP G P
Sbjct: 972 APTPYAAPTPGMPSLSAPTPGPGAGIAPTPFGAP 1005
>sp|P0CR71|SPT5_CRYNB Transcription elongation factor SPT5 OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=SPT5 PE=3
SV=1
Length = 1152
Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 256/905 (28%), Positives = 415/905 (45%), Gaps = 118/905 (13%)
Query: 119 ELPDEDGGRGIHRRPLLPR---EDEQEDVEALERRIQARYARSSHTEYDEETTDVEQQAL 175
E P++ G R H+ L R +E+EDV + +R++ R+A ++ Y+ ++ V Q+ L
Sbjct: 140 EAPEDVGARDDHQHRRLNRVFGRNEEEDVHDIVQRLKERHAGAAR--YNGDSDAVPQRLL 197
Query: 176 LPSVRDPKLWMVKCAIGREREAAVCLMQKCIDK---GSELQIRSVIALDHLKNYIYIEAD 232
+P V DP LW V GRE + +K + + + + SV D + I+IEA
Sbjct: 198 MPGVNDPSLWKVVVKSGREHAICASIFRKVFAQQYSANPIDVISVFCRDSIPGMIFIEAR 257
Query: 233 KEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLA 291
+ A V A G+ I+ S+ V LVPI EM +L ++ K ++L+ WVRMK G + GDLA
Sbjct: 258 QSASVSAAVNGIVGIFMSRGVNLVPIEEMAPLLKMKKKDVNLTPGMWVRMKRGKHAGDLA 317
Query: 292 KVVDVDNVRQRVT-VKLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRV 350
+VVDVD + V +K IPRIDL + E + K PP R D+ R+++ R
Sbjct: 318 QVVDVDQITSGVVGIKFIPRIDLTPREKRKERIAIGKPGGVRPPARLFAYDDVRKIYGRQ 377
Query: 351 ERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGEN-GESD 409
R+ F+N + DGF K V + +++ +++ PT +E+ +F ++ + D
Sbjct: 378 SVRQGAQGSYLFDND---EYVDGFCIKDVKIPAVATEDVNPTLEEISRFTGDDDSTAKFD 434
Query: 410 IASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAV 468
+++++ N GD + V +G+ L G VE V + + I+ E + +T+ V
Sbjct: 435 LSAIADANKNLSTSLLFPGDKIEVYEGEQTGLYGIVEAVSPDVIAIKAEGGEVHGQTVEV 494
Query: 469 NSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSE 528
++ + K F+ G HVKV+ G A+GMV++V+ ++ ++SD +++I+VF+ D+ ++++
Sbjct: 495 PARSVRKRFDVGEHVKVLGGKHTDASGMVVEVKGDIVTLMSDLGEQEIKVFSKDLRKAAD 554
Query: 529 VTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE 588
T G Y++ D+V+LD+ + GV+ +VE ++L V ++ + +
Sbjct: 555 TTNLTVTKGLYDVHDMVMLDSTTAGVVTKVEGGLLRILD---QNGAAKSVSPEQVSIRRD 611
Query: 589 KK--SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICA 645
K + D N + V D ++ +G +QG V +I+R I F+++R + ++ G A
Sbjct: 612 NKRFAVATDSQGNDMKVGDNMKETDGEM--RQGEVFNIFRSIFVFLYNREYTDNFGVFVA 669
Query: 646 KSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSP-GRYSRGGPPAGGRNRGGRGGH 704
+++S + V A D ++ N P Q P G S P NR
Sbjct: 670 RANSLISVTPKSAVND-----LTKIN----PALNQQLPYGGASLMPAPTANLNR------ 714
Query: 705 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI--SDNVVVSTPY 762
+ L+ T V V G KG G + DV+G++ RVEL+ K ++V+ + + D +T
Sbjct: 715 NRLINTLVVVTKGTSKGLIGVIKDVQGENARVELKHNNKTLSVNLASLKRKDQKTGAT-- 772
Query: 763 RYIELFFILFYHFLMLKLTVHVIMFCSDTPRYGM------GSETPMHPSRTPLHPYM--- 813
+ M + + + P G G T MHPS P +
Sbjct: 773 ----------FPLEMAGIASAAGGYGA-RPNAGQYDINPYGGATAMHPSMGGQTPALMGG 821
Query: 814 -TPMRDAGATP------IHDGMRTPMRDRAWNPYTP----MSPPRDNWEDGNPGSWGTS- 861
TP G TP + +G +TP NPY +P N G +WG S
Sbjct: 822 RTPAARFGQTPNPYAAGVQNG-KTP------NPYAAGVGGKTPSAANASGGKTPAWGASG 874
Query: 862 ---PQY-------------QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSS-TY 904
P Y Q G P+ AY PG TP Y G P S S
Sbjct: 875 GKTPAYGMASGGKTPAYGMQGGKTPN-AYAMAPPGPSGGRTPA--YGAYGRPEASGSRPS 931
Query: 905 VNAP------SPYLPSTPGGQ----PMTPNSASYLPGTPGGQPM-----TPGTGGLDAMS 949
V AP +PY TP G P P + P TP G P TPG L A +
Sbjct: 932 VMAPPSAPYSAPYSAPTPAGNGAPTPAIPGNPYTAP-TPYGAPTPYAAPTPGMPSLSAPT 990
Query: 950 PVIGA 954
P GA
Sbjct: 991 PGPGA 995
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 64/154 (41%), Gaps = 32/154 (20%)
Query: 791 TPRYGM--GSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRD 848
TP YGM G +TP + + TP A A P G RTP A+ Y
Sbjct: 877 TPAYGMASGGKTPAYG----MQGGKTPNAYAMAPPGPSGGRTP----AYGAY-------- 920
Query: 849 NWEDGNPGSWGTSPQYQ--PGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVN 906
G P + G+ P P +P S Y APTP A TP + G P + + Y
Sbjct: 921 ----GRPEASGSRPSVMAPPSAPYSAPYSAPTPAGNGAPTP----AIPGNPYTAPTPY-G 971
Query: 907 APSPYLPSTPGGQPM---TPNSASYLPGTPGGQP 937
AP+PY TPG + TP + + TP G P
Sbjct: 972 APTPYAAPTPGMPSLSAPTPGPGAGIAPTPFGAP 1005
>sp|Q2UGU3|SPT5_ASPOR Transcription elongation factor spt5 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=spt5 PE=3 SV=1
Length = 1026
Score = 260 bits (665), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 284/975 (29%), Positives = 457/975 (46%), Gaps = 147/975 (15%)
Query: 75 GAARKPKAKRRSG--SEFFDLEAQVDSDEEEDEEEGEDDFIVDG------------GAEL 120
GA +PK +RR G + FF+ EA VD DE+E E+E ++ + G GAE
Sbjct: 94 GAVSRPKKRRRKGGVAHFFEEEAGVDEDEDEAEDEEDEMAELGGEMHPDDMDALPVGAET 153
Query: 121 PDEDGGRGIHRRPLLPREDEQEDVEAL-ERRIQARYARSSHTEYDEETTDVEQQALLPSV 179
D + +R L D ++ + L ER + R A S + V ++ LLPSV
Sbjct: 154 DDRRHRQLDRQRELEASMDAEKQAQLLKERYGRNRAAAS-------DAVVVPKRLLLPSV 206
Query: 180 RDPKLWMVKCAIGREREAAVCLMQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKE 234
DP +W V+C G+ERE + ++ ++ GS ++ + A + + YIY+EA ++
Sbjct: 207 EDPSIWGVRCKPGKEREVIFAIQKRIEERPMGSRNPMKIISAFERGGAMSGYIYVEARRQ 266
Query: 235 AHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKV 293
A V +A + + N+Y + K++LVP+REM D+L V+ K+ +L WVR+K G Y+ DLA++
Sbjct: 267 ADVMDALQDMSNVYPRTKMILVPVREMPDLLRVQ-KSEELLPGGWVRIKRGKYQNDLAQI 325
Query: 294 VDVDNVRQRVTVKLIPRIDLQALANKLEGR---EVAKKKPFV------PPPRFMNVDEAR 344
+V+ VTV+L+PR+D N+ G + +K+P + PP R + EA+
Sbjct: 326 EEVETNGLAVTVRLVPRLDYG--MNEDIGAPFMDPKRKRPGMNPAVARPPQRLFSEAEAK 383
Query: 345 ELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGE 404
+ H + + G + + G + DGFL K + ++ + +N+ P +E+ F E
Sbjct: 384 KKHGKYLSATSGLGGKSWSYL-GETYVDGFLIKDMKVQHLITKNVSPRLEEVTMFARGSE 442
Query: 405 NGES--DIASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKG 461
+G + D+ASL+ TL + + ++ GD V V +G+ + L G + V ++
Sbjct: 443 DGTANLDLASLAETLKNSTAEDSYLPGDPVEVFRGEQQGLIGRTTSTRGDIVTLQVTEGD 502
Query: 462 LP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVF 519
L + + K L K F G+HVKV+ G++ GMV++V+ + +LSD + ++I VF
Sbjct: 503 LAGQHIDAPVKSLRKRFREGDHVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVF 562
Query: 520 ADDVVESSEVTTGI-TKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALV 578
+ D+ S+E TG+ K+G +++ DLV LD + I++V+ E+ +VL + +
Sbjct: 563 SKDLRLSAE--TGVDGKLGMFDVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTI 617
Query: 579 KLREIKCKLEKKSN--VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHH 636
++ K+ + + DRN + D VR V G + + G + HI+R LF+H++
Sbjct: 618 LPTQVTNKITPRRDAVATDRNGAEIRHGDTVREVYG--EQRNGVILHIHRSFLFLHNKAQ 675
Query: 637 LEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGR 696
E++G ++++ V V S G G ++ N P SRGG P+G
Sbjct: 676 AENSGITVVRTTNVVTV--SAKGGRSTGPDLTKMN-----------PALMSRGG-PSGMM 721
Query: 697 NRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNV 756
G D ++G TV VR GP+KG G V D RVEL S+ K+V++ + ++
Sbjct: 722 GPPKSFGRDRMIGKTVMVRKGPFKGLVGIVKDAGDVQARVELHSKNKLVSIPKELL---- 777
Query: 757 VVSTPY--RYIELF---------FILFYHFLMLKLTVHVIMFCSDTPRYGMGSE--TP-- 801
VV P + IE+ T S TP +G S TP
Sbjct: 778 VVKDPVTGQTIEMGRGRGGPRVPSAAPPSGWQGGRTPMAAADSSRTPAWGGASSARTPAW 837
Query: 802 --MHPSRTPL---------HPY------------MTPMRDAGA-TPI---------HDGM 828
M SRTP +PY TP +AGA TP D
Sbjct: 838 AGMGGSRTPAWKNDGSRTSNPYDGSRTAYGGFGSRTPAWNAGARTPYGGSGSGQSDFDAF 897
Query: 829 RTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPG 888
R AWN + P +W + GS SR Y+APTPG +++
Sbjct: 898 AAGSRTPAWNANSGSRTP----------AWSGATASN-GSKDSRGYDAPTPGGAYSAPTP 946
Query: 889 GNYSDAGTPRDSSST----YVNAPSP--YLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT 942
G Y+ A TP S+ T +AP+P + TPGG P+ Y TP P
Sbjct: 947 GAYASAPTPGVSAPTPGAWADSAPTPGAFNAPTPGG----PSKKPYDAPTPAAWDSRP-- 1000
Query: 943 GGLDAMSPVIGADNE 957
DA +P +G D +
Sbjct: 1001 --YDAPTPAMGGDGD 1013
>sp|Q5BCN2|SPT5_EMENI Transcription elongation factor spt5 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=spt5 PE=3 SV=1
Length = 1016
Score = 256 bits (655), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 277/923 (30%), Positives = 422/923 (45%), Gaps = 134/923 (14%)
Query: 79 KPKAKRRSG----SEFFDLEAQVDSDEEEDEE---------EGEDDFIVDGGAELPDEDG 125
KP+ KRR G S F D EA VD +E+E E+ E D ++ GAE D
Sbjct: 91 KPR-KRRKGHGGLSAFIDYEAGVDEEEDEVEDEEEEEGYGLEQHPDDVLPAGAETDDRQ- 148
Query: 126 GRGIHRRPLLPREDEQE---DVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDP 182
HRR L RE E D E + ++ RY R+ D V ++ LLPSV DP
Sbjct: 149 ----HRR--LDRERELAATLDAEKQAQLLKERYGRNRAAATD--AVIVPKRLLLPSVDDP 200
Query: 183 KLWMVKCAIGREREAAVCLMQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHV 237
+W V+C G+ERE + ++ D+ GS I+ + A + + YIY+EA ++A V
Sbjct: 201 SIWGVRCKAGKEREVVFSIQKRIEDRPPGSRNPIKIISAFERGGAMSGYIYVEARRQADV 260
Query: 238 KEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDV 296
+A + + N+Y + K++LVP++EM D+L V+ K+ +L+ WVR+K G Y DLA++ +V
Sbjct: 261 MDALQDMSNVYPRTKMILVPVKEMPDLLRVQ-KSEELNPGGWVRIKRGKYMNDLAQIEEV 319
Query: 297 DNVRQRVTVKLIPRIDLQALANKLEGREV---AKKKPFV------PPPRFMNVDEARELH 347
+ VTV+L+PR+D N+ G + +K+P PP R + EA++ H
Sbjct: 320 ETNGLAVTVRLVPRLDYGM--NEDSGAPIMDPKRKRPGANPAVARPPQRLFSEAEAKKKH 377
Query: 348 IRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGE 407
+ + + N G + DGFL K + ++ + +N+ P +E+ F ENG
Sbjct: 378 SKYLTATAGLGAKSW-NYLGETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARDSENGT 436
Query: 408 S--DIASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHI---RPEMKG 461
S D+ASL+ TL + + ++ GD V V KG+ + L G + V I E+ G
Sbjct: 437 SNLDLASLAETLKNSTAEESYLPGDPVEVFKGEQQGLVGRTSSTRGDIVTILVTEGELAG 496
Query: 462 LPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFA 520
+T+ K L K F G+HVKV+ G++ GMV++V + +LSD + ++I VF+
Sbjct: 497 --QTIEAPVKTLRKRFREGDHVKVIGGSRYQDELGMVVQVRDDTVTLLSDMSMQEITVFS 554
Query: 521 DDVVESSEVTTGIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVK 579
D+ S+E TG+ K+G +++ DLV LD + I++V+ E+ +VL + +
Sbjct: 555 KDLRLSAE--TGVDGKLGMFDVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTIL 609
Query: 580 LREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHL 637
++ K+ + + DRN + D VR V G + + G + HI+R LFIH++
Sbjct: 610 PSQVTNKITPRRDAVATDRNGAEIRHGDTVREVYG--EQRSGVILHIHRSFLFIHNKAQA 667
Query: 638 EHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAG--G 695
E+AG + ++++ V V S G G S+ N R G P G
Sbjct: 668 ENAGIVVVRTTNVVTV--SAKGGRPTGPDLSKMNPA------------LMRNGAPGGMMA 713
Query: 696 RNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSM--IS 753
G D L+G TV V+ GP+KG G V D RVEL S+ K+VT+ + + +
Sbjct: 714 PPPSKTFGRDRLLGKTVLVKKGPFKGLLGIVKDTTDVQARVELHSKNKLVTIPKELLVVK 773
Query: 754 DNVVVST------------------PYRYIELFFILFYHFLMLKLTVHVIMFCSDTPRY- 794
D V T P + + S TP +
Sbjct: 774 DPVTGQTIDIGRGRGGPRVPQNSAAPSSGWQGGRTPMAAADSSRTPAWGAAMSSRTPAWS 833
Query: 795 --GMGSETPMHPSRTPLHPY-----MTPMRDAGA-TP----------------IHDGMRT 830
G+GS TP + Y TP +AGA TP G RT
Sbjct: 834 GAGLGSRTPAWKADGSRTAYGGAGSRTPAWNAGARTPYGGGFGSGSGNSDFDAFAAGSRT 893
Query: 831 PMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGS-GWASTPGG 889
P A TP N N +P P Y APTPG+ G A TPG
Sbjct: 894 PAWGAASGSRTPAWSASANTTSRNDNKAYDAPT------PGATYSAPTPGAYGGAPTPGL 947
Query: 890 NYSDAGTPRDSSST--YVNAPSP 910
+ G DS+ T NAP+P
Sbjct: 948 SAPTPGAWADSAPTPGAYNAPTP 970
>sp|Q7S3C4|SPT5_NEUCR Transcription elongation factor spt-5 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=spt-5 PE=3 SV=2
Length = 1052
Score = 247 bits (631), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 261/885 (29%), Positives = 404/885 (45%), Gaps = 118/885 (13%)
Query: 143 DVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKLWMVKCAIGREREAAVCLM 202
D E ++ RY + + + V ++ LLPSV DP +W V+C G+ERE +M
Sbjct: 198 DAEKQAEILRERYGKRAPARGYGDMAIVPRRLLLPSVEDPSIWAVRCKEGKEREVIFSIM 257
Query: 203 QKCIDK-GSELQIRSVIALDH------LKNYIYIEADKEAHVKEACKGLRNIYSQKVM-L 254
++ ++ G++ ++ A + +K YIY+EA ++ + A G+ N+Y + M L
Sbjct: 258 RRIEERMGTKNEVPITAAFERGGINSVMKGYIYVEAQRQNDILVALDGILNVYPRSNMHL 317
Query: 255 VPIREMTDVLAVESKAIDLSRDTWVRMKI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDL 313
V I++M D+L V K +L WVR+K + GDLA+V+DV V+ IPR+D
Sbjct: 318 VEIKDMPDLLRV-IKTPNLEPGAWVRLKKPAKHAGDLAQVIDVTENGLEARVRFIPRLDY 376
Query: 314 QALAN---KLEG-REVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGML 369
+ + +G R+ PP R + EAR+ H R + +P T + N G
Sbjct: 377 GVRDDPVFQADGKRKRPGVPGPRPPQRLFSEAEARKRHPRY-LQGNPQTNSW--NYNGDD 433
Query: 370 FKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDI---ASLSTLFANRKKGHFM 426
F++GF K + ++ + +N+ PT +E+ KF + E+G ++ A +TL + K ++
Sbjct: 434 FENGFQVKDIKIQQLEVKNVNPTLEEVTKFASGAEDGTENLDLKALAATLKDSAKSVAYV 493
Query: 427 KGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKV 485
GD + V +G+ + + G V + V ++ L +T+ V +K L K F G+HVKV
Sbjct: 494 PGDIIEVYEGEQQGVIGKATNVQGDIVTLQVTEGDLAGRTIDVPNKGLRKRFRIGDHVKV 553
Query: 486 VSGTQA-GATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDL 544
+ G++ GMV+K+ + +L+D T +I VF+ D+ E+S++ G +G Y L DL
Sbjct: 554 IGGSRFRDEVGMVVKIVDDRVTLLTDQTNTEITVFSKDLREASDIG-GQGSLGQYSLLDL 612
Query: 545 VLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNVQDRNKNTVA 602
V LD + G I++V+ E+ VL D +V + +I KL K+ + DRN + +
Sbjct: 613 VQLDATTVGCIVKVDRESVVVLDQNGDTKQV---QPSQITNKLPKRKFAVAADRNGSEIR 669
Query: 603 VKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 662
+ DVVR G + +QG + HI+R +F+H E+AG +++S V A G R
Sbjct: 670 LDDVVREYGG--QQRQGKIIHIHRSYIFLHTTTTNENAGVFVTRANSVTTVA---AKGGR 724
Query: 663 N----GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGP 718
N G S N P + ++P + P G D + TV +R G
Sbjct: 725 NTATAGPDLSAMN-----PALKRNPTASGKQMPAPR------TFGPDRAINQTVVIRRGG 773
Query: 719 YKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS--DNVV-----VSTPYRYIELFFIL 771
YKG G V D RVEL S+ K++T+ ++ +S D V ++ F
Sbjct: 774 YKGLLGIVKDTTDTHARVELHSRGKIITIPKADLSFKDKVTGKTIDINQRGGSRGGFGGG 833
Query: 772 FYHFLMLKLTVHVIMFCSD-TPRYGMG-SETPMHP-----SRTP--------LHPY---M 813
+ SD TP +G S TP SRTP ++PY
Sbjct: 834 GRGGGEFGSRTPMASGGSDRTPAWGSSRSRTPAWNRDAGGSRTPAWNDGSRTVNPYDGSR 893
Query: 814 TPMRDAGA-------TPI-HDGMRTPMRDR-AWNPYTP-MSPPRDNWEDGNPG------- 856
TP A A TP H G RTP D TP S D+W PG
Sbjct: 894 TPYGGATAYGGIGSRTPAWHSGSRTPAPDSFGHGSKTPAWSAGSDSWGSKTPGYGASAPT 953
Query: 857 ------SWGTSPQYQPGSPPSRAYEAPTPGSGW-ASTPGGNYSDAGTPRDSSSTYVNAPS 909
+WG +P G S AY+APTPG G A TPG +NAP+
Sbjct: 954 PGASGDAWGYTPGASGGGNSSSAYDAPTPGGGLSAPTPG--------------AALNAPT 999
Query: 910 PYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 954
P G P A+ TPG G+GG +P GA
Sbjct: 1000 P-------GAYSAPTPAAVSAPTPGAWQGGWGSGGDAVSAPTPGA 1037
>sp|Q5ALX3|SPT5_CANAL Transcription elongation factor SPT5 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=SPT5 PE=3 SV=1
Length = 956
Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 219/728 (30%), Positives = 367/728 (50%), Gaps = 73/728 (10%)
Query: 81 KAKRRSGSEFFDLEAQVDSDEEEDEEEG------EDDFIVDGGA------ELPDEDGGRG 128
+ +RR ++FFD+EA+VD +EE++E+E ++FI D A ++P +D
Sbjct: 99 RKRRRGANQFFDIEAEVDDEEEDEEDEDEEAELMREEFITDDHAPVETVEKMPQDDR--- 155
Query: 129 IHRRPLLPRED-EQEDVEALERRIQARYARSSHTEYDEETT---DVEQQALLPSVRDPKL 184
+HR+ R+ E +D E L ++ RY R +H+ Y ET V Q+ L+PS+ DP +
Sbjct: 156 LHRQYDNRRQQAEDQDAEQLAETLKQRY-RKTHSVYRGETAASGTVSQKLLMPSINDPSI 214
Query: 185 WMVKCAIGREREAAVCLMQK---CIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEAC 241
+ ++C GRE+E L +K +G+ L I +V D YIYIEA + + +A
Sbjct: 215 YAIRCTPGREKELVRKLYEKKRTLERQGNPLDILTVFQRDAFTGYIYIEAKRPDAIDKAL 274
Query: 242 KGLRNIYSQKVMLVPIREMTDVLA-VESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVR 300
G+ N++ + +LVP++E D+L V+S +++ +VR+K G Y+GDLA V ++
Sbjct: 275 VGMVNVFVRDKLLVPVKEYPDLLKQVKSSDVEIRPGIYVRIKRGIYRGDLAIVDNLSENG 334
Query: 301 QRVTVKLIPRIDLQALANKLEGREVAKKKPFVPPPRFMNVDEARELH-IRVERRRDPMTG 359
V +++PR+D +V K K P P + +AR +++ R P +
Sbjct: 335 LDVRCQVVPRLDYGQNDEIGPDGKVIKSK-IKPLPALFSEQKARMYDPYKLQMGRVPNSF 393
Query: 360 DYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPG-ENGESDIASLSTLFA 418
Y G + DG+LYK ++ I +++ PT +EL++F+ E+G + A +TL
Sbjct: 394 IY----RGNEYYDGYLYKDFKLQFIQTKDVNPTLEELDRFQNQNDEDGLNLQAIAATLKG 449
Query: 419 N-----RKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPK----TLAVN 469
N + F GD V + +G+ G V + + I+ G P+ L V
Sbjct: 450 NNAGEGKSSTAFQPGDKVEIRRGEQAKTIGIVVETALNEITIKVTDSGDPRFVDQRLTVP 509
Query: 470 SKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEV 529
+ +L K F G+HV++V G TG+V+K++ ++I+SD TKED+RVFA+ +V++++
Sbjct: 510 ANDLRKIFYEGDHVRIVEGKHFDETGLVIKIDGDSVVIVSDQTKEDVRVFANYLVKATDA 569
Query: 530 TTGITKIGD-YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLRE--IKCK 586
++ + Y+++DLV L + GVII+ E F VL + L+ +R+ I K
Sbjct: 570 SSNFDLLNSKYDIKDLVELSGLTVGVIIKAEKNIFDVLT-----TDGRLISVRQSGIASK 624
Query: 587 LEKKSNVQ---DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFI 643
L++ Q DRN T+ V D V+ + G K ++G + HIY+ LFI +E+ G
Sbjct: 625 LKQSRREQVATDRNGTTIRVGDTVKELLGE-KSREGAILHIYKNALFIKSNEIVENLGIF 683
Query: 644 CAKSSSCVVVGG--SRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGR 701
A + V S + D S +LR P + AG + R
Sbjct: 684 VANRMNVTTVATKDSTVSKSLGPDLTSMNPNLRLPNPV-----------AVAGLKTR--V 730
Query: 702 GGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVS-- 759
GG D L+ V V G YKG +G+V + R+EL ++ K + V ++ + NV+V
Sbjct: 731 GGRDKLLYKDVAVTSGSYKGLKGKVTEADDLYARIELHTKSKKIKVLKNNL--NVIVHGQ 788
Query: 760 -TPY-RYI 765
PY R+I
Sbjct: 789 PVPYLRFI 796
>sp|P27692|SPT5_YEAST Transcription elongation factor SPT5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPT5 PE=1 SV=1
Length = 1063
Score = 239 bits (611), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 209/711 (29%), Positives = 351/711 (49%), Gaps = 73/711 (10%)
Query: 81 KAKRRSGSEFFDLEAQVDSDEEEDEEEGEDDFIVDG----GAELPDEDGGRGIHRRPLLP 136
K +R+ + F D+EA+V DE+EDE+E + + + +G G + DE G R L
Sbjct: 171 KRRRQERNRFLDIEAEVSDDEDEDEDEEDSELVREGFITHGDDEDDEASAPGARRDDRLH 230
Query: 137 REDEQ-------EDVEALERRIQARYARSSHTEYDEETTD--VEQQALLPSVRDPKLWMV 187
R+ +Q ED + L + ++ RY RSS +Y D V Q+ LLPSV +W V
Sbjct: 231 RQLDQDLNKTSEEDAQRLAKELRERYGRSSSKQYRAAAQDGYVPQRFLLPSVDTATIWGV 290
Query: 188 KCAIGREREAAVCLMQK--CIDKG---SELQIRSVIALDHLKNYIYIEADKEAHVKEACK 242
+C G+E+E L++K +D+ +L+I S+ D+ IYIEA K++ +++ C
Sbjct: 291 RCRPGKEKELIRKLLKKKFNLDRAMGKKKLKILSIFQRDNYTGRIYIEAPKQSVIEKFCN 350
Query: 243 GLRNIYSQKVMLVPIREMTDVLA-VESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQ 301
G+ +IY + +L+P++E+ +L +S + L ++VR+K G YKGDLA V +
Sbjct: 351 GVPDIYISQKLLIPVQELPLLLKPNKSDDVALEEGSYVRIKRGIYKGDLAMVDQISENNL 410
Query: 302 RVTVKLIPRIDLQAL--ANKLEGREVAKKKPFV--PPPRFMN------VDEARELHIRVE 351
V +K++PR+D + + +++ F PP+ N +D+A L+ R +
Sbjct: 411 EVMLKIVPRLDYGKFDEIDPTTQQRKSRRPTFAHRAPPQLFNPTMALRLDQA-NLYKRDD 469
Query: 352 RRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIA 411
R DY DG+LYK+ ++ + +NIQPT +EL +F + + G D+
Sbjct: 470 RHFTYKNEDYI---------DGYLYKSFRIQHVETKNIQPTVEELARFGS--KEGAVDLT 518
Query: 412 SLSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVN 469
S+S A K F GD + V+ G+ + KG V + ++ I+ + G L
Sbjct: 519 SVSQSIKKAQAAKVTFQPGDRIEVLNGEQRGSKGIVTRTTKDIATIK--LNGFTTPLEFP 576
Query: 470 SKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEV 529
L K FEPG+HV V++G G G+VL VEQ + +S T ++ + A+++ +S +
Sbjct: 577 ISTLRKIFEPGDHVTVINGEHQGDAGLVLMVEQGQVTFMSTQTSREVTITANNLSKSIDT 636
Query: 530 TTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVK----LREIKC 585
T + +Y L D+V L + II+ + F+V + + +V+ + L +I
Sbjct: 637 TATSS---EYALHDIVELSAKNVACIIQAGHDIFKV---IDETGKVSTITKGSILSKINT 690
Query: 586 KLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICA 645
+ S+V D N N + + D IVE ++G V +I +F+ + +E+AG
Sbjct: 691 ARARVSSV-DANGNEIKIGDT--IVEKVGSRREGQVLYIQTQQIFVVSKKIVENAGVFVV 747
Query: 646 KSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNR---GGRG 702
S+ V S+ N N S+ N P S+ GPP+ + RG
Sbjct: 748 NPSNVEAV-ASKDNMLSNKMDLSKMN-----------PEIISKMGPPSSKTFQQPIQSRG 795
Query: 703 GHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS 753
G + +G TV++R YKG G V DV G VEL S+ K +T+D+ ++
Sbjct: 796 GREVALGKTVRIRSAGYKGQLGIVKDVNGDKATVELHSKNKHITIDKHKLT 846
>sp|Q4I5I4|SPT5_GIBZE Transcription elongation factor SPT5 OS=Gibberella zeae (strain
PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SPT5
PE=3 SV=1
Length = 1042
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 228/849 (26%), Positives = 380/849 (44%), Gaps = 81/849 (9%)
Query: 139 DEQEDVEALERRIQARYARSSHTEYDEETTDVEQQALLPSVRDPKLWMVKCAIGREREAA 198
D D E ++ RY + + + V ++ LLPSV DP +W V+C G+ERE
Sbjct: 171 DSSMDAEKQAEILRQRYGNRRSGKGFRDVSVVPKRLLLPSVDDPSIWAVRCKEGKEREVV 230
Query: 199 VCLMQKCIDK-GSELQIRSVIALDH------LKNYIYIEADKEAHVKEACKGLRNIYSQ- 250
+M++ ++ G++ ++ A + +K ++Y+EA ++ + + + N+Y
Sbjct: 231 FSIMKRIEERAGTKDELAITAAFERGGIESVMKGFVYVEARRQTDILKGLDSMMNVYPHS 290
Query: 251 KVMLVPIREMTDVLAVESKAIDLSRDTWVRM-KIGNYKGDLAKVVDVDNVRQRVTVKLIP 309
K++LV I++M ++ + SK L WVR+ + + GDLA+V+DV V+ IP
Sbjct: 291 KMILVDIKDMPELFRI-SKTPTLEPGAWVRLRRPPKHNGDLAQVIDVTENGLEARVRFIP 349
Query: 310 RIDLQALANKLEGREVAKKKPF----VPPPRFMNVDEARELHIRVERRRDPMTGDYFENI 365
R+D + L + +K+PF PP R + EAR+ + R + +P TG + N
Sbjct: 350 RLDYGMRDDALSA-DGKRKRPFGNGPKPPQRLFSEIEARKRNPRAI-QGNPSTGTWTYN- 406
Query: 366 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDI---ASLSTLFANRKK 422
F++GF + V ++ ++ ++ P+ +E+ +F + E+G ++ A +L +
Sbjct: 407 -NEEFENGFQVRDVKIQQLTVTDVNPSLEEVTRFASGAEDGTENLDLKALAHSLKDSNAL 465
Query: 423 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGN 481
++ GD V V G+ K + G +V + V I E + + + + V + L K F G+
Sbjct: 466 ATYLPGDVVEVYTGEQKGVVGKAMRVHSDVVSITVTEGELVGQEIDVPIRALRKRFNVGD 525
Query: 482 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYE 540
HVKV+ G++ GMV+ + + IL+D T +I VF+ D+ E+S++ G +G Y
Sbjct: 526 HVKVIGGSKFRDEVGMVVNIRDDKVTILTDQTNTEITVFSKDLREASDI-GGQGSLGQYS 584
Query: 541 LRDLVLLDNNSFGVIIRVESEAFQVLK--GVPDRPEVALVKLREIKCKLEKKSN--VQDR 596
L DLV LD + G +++V+ E+ L G P + V +I K+ K+ DR
Sbjct: 585 LHDLVQLDPTTVGCVVKVDRESLVALDQFGTPRQ-----VMPSQISNKIPKRKTAVAVDR 639
Query: 597 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSS--SCVVVG 654
+ + + ++DVV+ G + +QG + HI+R +F+H + EHAG K++ + V
Sbjct: 640 HGSEIRLEDVVKEYTG--QQRQGKIIHIHRSYIFLHSNDNKEHAGVFVTKANMVNTVAAK 697
Query: 655 GSRAN-GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVK 713
G R N G + N P G ++ PP G D + TV
Sbjct: 698 GGRVNTAAATGPDLTAMN----PALKLHKNGSENKPVPPPRSF------GKDKAIEQTVV 747
Query: 714 VRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRYIELFFILFY 773
++ G YKG G V D RVEL ++ K +TV + D + +
Sbjct: 748 IKKGAYKGLLGIVKDTTDTHARVELHTKSKTITVPK----DCLAFKNRMTGATIDIASRG 803
Query: 774 HFLMLKLTVHVIMFCSDTPRYGMGSETPM---HPSRTPLHPYMTPMRDAGATPIH----- 825
P + GS TPM + R P TP +G TP
Sbjct: 804 GRGGYGGGAGRGGGGDRVPGWQSGSRTPMAGGNSDRVPAWGSRTPAA-SGRTPAWKAQDM 862
Query: 826 DGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWAS 885
G RTP AW + P D GS G +P +Q G P PG + +
Sbjct: 863 SGARTP----AWADGSRTVNPYDGSRTAY-GSGGRTPAWQAGG------RTPAPGDAFGA 911
Query: 886 ---TPGGNYSDAGTPRDSSSTY-VNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 941
TP D+ + + V AP+ P GG P SY TPGG P
Sbjct: 912 GSRTPAYGGGDSWGSGSKTPAWGVTAPT---PGASGGDAWGP--GSYDAPTPGGALGAPT 966
Query: 942 TGGLDAMSP 950
G ++A +P
Sbjct: 967 PGAMNAPTP 975
>sp|Q6FRZ5|SPT5_CANGA Transcription elongation factor SPT5 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SPT5 PE=3 SV=1
Length = 1010
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 216/785 (27%), Positives = 381/785 (48%), Gaps = 87/785 (11%)
Query: 21 EQVMDDEIDEEEEEEDDRSSRKRRRSQFIDDVAEEDDEEEEEDYDDDEDYGG-------- 72
E +++ ++++ E+D+ S K S + A++D + + + ++++D G
Sbjct: 49 ENSLENSLEKDNAEKDNAESEKGSPS-VTETAADDDSSKTDGNGEENQDAEGLAEDYDEE 107
Query: 73 -----GGGAARKPKAKRRSG--SEFFDLEAQVDSDEEEDEEEGEDDFIVDG----GAELP 121
+P AKRR + F D+EA+V DEE++E+E + + + +G G +
Sbjct: 108 DFDEDEDDEDEEPAAKRRQQERNRFLDIEAEVSEDEEDEEDEEDSELVREGFITHGEDED 167
Query: 122 DEDGGRGIHRRPLLPREDEQ-------EDVEALERRIQARYARSSHTEYDEETTD--VEQ 172
DE+G G R L R+ +Q ED + L + ++ RY RSS +Y D V Q
Sbjct: 168 DEEGVAGNRRGDRLHRQLDQDLNKSSEEDAQRLAKELRERYGRSSSKQYRAAAQDGYVPQ 227
Query: 173 QALLPSVRDPKLWMVKCAIGREREAAVCLMQK--CIDKG---SELQIRSVIALDHLKNYI 227
+ LLPSV +W V+C G+E+E L++K +D+ +L+I S+ D+ I
Sbjct: 228 RFLLPSVDTATIWGVRCRPGKEKELVRKLLKKKFNLDRAMGKRKLKILSIFQRDNYTGRI 287
Query: 228 YIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESKAIDLSRDTWVRMKIGNY 286
YIEA K++ +++ C G+ +IY + +L+P++E+ +L +S + L ++VR+K G Y
Sbjct: 288 YIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPSKSDDVALEEGSYVRVKRGIY 347
Query: 287 KGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAKKKPFV--PPPRFMN--- 339
KGDLA V + V +K++PR+D + + + +++ F P P+ N
Sbjct: 348 KGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPVTQQRKSRRPTFAHRPAPQLFNPTM 407
Query: 340 ---VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDEL 396
+D+A L+ R +R DY DG+LYK+ ++ + +NIQPT +EL
Sbjct: 408 ALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSFRIQHVETKNIQPTVEEL 457
Query: 397 EKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVH 454
+F + + G D+ ++S A K F GD V ++ G+ + +G V K
Sbjct: 458 ARFGS--KEGAVDLTAISQSIKKAQAAKVSFQPGDRVEILNGEQRGSRGIVAKSTTTIAT 515
Query: 455 IR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTK 513
+ PE P V++ L K FEPG+HV V++G G G+VL ++Q + +S+ T+
Sbjct: 516 VNLPEFPLKPLEFPVSA--LRKIFEPGDHVMVINGEHQGDAGLVLTIKQGQVTFMSNQTR 573
Query: 514 EDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRP 573
E++ + A+++ +S + T + +Y L D+V L + II+ + F+V + +
Sbjct: 574 EEVTITANNLSKSIDSTPTSS---EYSLHDIVELSAKNVACIIQAGHDIFKV---IDETG 627
Query: 574 EVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILF 630
+V+ + I K+ + D + N + + D IVE ++G V +I +F
Sbjct: 628 KVSTITKGSILSKINTSRSRLTTVDSSGNEIKIGD--SIVEKIGARREGQVLYIQSQQIF 685
Query: 631 IHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGG 690
+ + +E+AG + + S+ N N S+ N P S+ G
Sbjct: 686 VVSKKIVENAGVFVVNPVNVEAI-ASKDNMLNNKLDLSKMN-----------PDIISKMG 733
Query: 691 PPAGGRNRGG--RGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVD 748
PP R G + +G TV+VR YKG G V DV G VEL S+ K +T+D
Sbjct: 734 PPKSSMPSAAPVRTGREVALGKTVRVRSAGYKGQLGIVKDVNGDKATVELHSKNKHITID 793
Query: 749 RSMIS 753
+ ++
Sbjct: 794 KRKLT 798
>sp|Q6CWW9|SPT5_KLULA Transcription elongation factor SPT5 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SPT5 PE=3 SV=1
Length = 1036
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 231/889 (25%), Positives = 387/889 (43%), Gaps = 115/889 (12%)
Query: 112 FIVDGGAELPDEDGGRGIHRRPLLPREDEQ-------EDVEALERRIQARYARSSHTEYD 164
FI G E ++ GGR R L RE +Q ED+ + + RY R S +Y
Sbjct: 167 FITRGDEEDEEDRGGRVDDR---LHRELDQNLQKTADEDMHKIAEDFKKRYGRDSSKDYR 223
Query: 165 EETTD--VEQQALLPSVRDPKLWMVKCAIGREREAAVCLMQK--CIDKG---SELQIRSV 217
+T V Q+ +LPSV +W V+C G+E+E L+ K +DK +L+I S+
Sbjct: 224 VQTQGGYVPQRFMLPSVDTAIIWSVRCRPGKEKELVRKLLNKKFNLDKSMGSKKLKILSI 283
Query: 218 IALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESKAIDLSRD 276
D+ IYIEA K++ +++ G+ ++YS + +L+P++E+ +L +S + L
Sbjct: 284 FQRDNYTGRIYIEAPKQSVIEKFVNGVPDVYSNQKLLIPVQELPLLLKPTKSDEVRLDVG 343
Query: 277 TWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE---GREVAKKKPFV- 332
++VR+K G YK DLA + + +K++PR+D ++++ + AK+ F
Sbjct: 344 SYVRIKRGIYKNDLAVIDQISQNNLEALLKIVPRLDY-GKNDEIDPDTNQRKAKRATFAS 402
Query: 333 -PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQP 391
PPP+ N A L +RD Y + + DG+L+K+ ++ + +NIQP
Sbjct: 403 RPPPQLFNPTMALRLDQANLFKRDDRHFTYRKED----YVDGYLFKSFKIQYLDTKNIQP 458
Query: 392 TFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVD 449
T +EL +F + + G+ D+A+++ A K F GD V V+ G+ + +G V +
Sbjct: 459 TVEELSRFGS--KEGDVDLAAIAQTMKKAQASKAMFQPGDRVEVLTGEQRGSRGVVTRSS 516
Query: 450 EENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIIL 508
++ + ++ + G K+L L K FE G+HV V++G G G+VL V+ + +
Sbjct: 517 KDVISVK--LSGFSDKSLEFPIASLRKIFELGDHVTVIAGEHEGNAGLVLLVQNGQVTFV 574
Query: 509 SDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKG 568
SD T+E++ + A+++ +S + T + +Y L D+V L + +I+ + F++
Sbjct: 575 SDQTRENLTISANNLSKSMDSTPTSS---EYALHDIVELSAKNVACVIQAGHDIFKI--- 628
Query: 569 VPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIY 625
+ D +VA V I K+ K D N + + DVVR E ++G V ++
Sbjct: 629 IDDSGKVATVTKGSILAKINVARAKVAAVDGNGREIKIGDVVR--EKIGSRREGQVLYVQ 686
Query: 626 RGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGR 685
+FI + E+AG + V S+ N + S+ N P
Sbjct: 687 NQHIFIRSKTITENAGVFVVNPMNVEAV-ASKENLMSSALDLSKIN-----------PNI 734
Query: 686 YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVV 745
S+ GPP + + G D + TV++R YKG G V DV G +EL S+ K +
Sbjct: 735 ASKMGPPQTTQ-QTRLVGRDVALNKTVRIRSAGYKGQLGIVKDVNGDKATIELHSKNKHI 793
Query: 746 TVDRSMISDNVVVSTPYRYIELFFILFYHFLMLKLTVHVIMFCSDTPRYGMGSETPMHPS 805
T+D+ ++ F H +T ++ R G T + PS
Sbjct: 794 TIDKRKLT-----------------YFSHEGGEGITYDELV-----SRRGRTPHTRLGPS 831
Query: 806 --RTPLHPYMTPMRDAGATPIHD-----GMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW 858
P H M GA + G TP WN + P ++G SW
Sbjct: 832 YVSAPRH-----MAAGGAVATNTPQQLPGGMTP----GWNAFDGGKTPAVG-QNGGTSSW 881
Query: 859 GTSPQY-------------QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYV 905
G + + G+ + + T G AST G S G ++S
Sbjct: 882 GGASTWGGQGPGGASAWGGAAGNTSTWGGQGATSTWGGASTWGNKSSYGGASSWAASGES 941
Query: 906 NAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 954
A S + GG + S G GG G+G S G
Sbjct: 942 GAASAW----GGGNKSSYGGTSTWGGNQGGVSAWGGSGNKSQRSKNTGG 986
>sp|Q759T6|SPT5_ASHGO Transcription elongation factor SPT5 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=SPT5 PE=3 SV=2
Length = 958
Score = 204 bits (518), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 202/708 (28%), Positives = 344/708 (48%), Gaps = 71/708 (10%)
Query: 81 KAKRRSGSEFFDLEAQVDSDEEEDEEEGEDDFIVDG----GAELPDEDGGRG-----IHR 131
K +RR + F D+EA+V DEE+DE++ + + + +G G E +ED +G +HR
Sbjct: 76 KKQRRERNRFLDIEAEVSDDEEDDEDDEDSELVREGFITHGDEDEEEDDAQGSKDDRLHR 135
Query: 132 R-PLLPREDEQEDVEALERRIQARYARSSHTEYDEETTD--VEQQALLPSVRDPKLWMVK 188
+ ++ +ED + L + ++ RY RSS +Y D V Q+ +LPSV +W V+
Sbjct: 136 QLDQDLQKSSEEDAQKLAKELRERYGRSSSKQYRAAAQDGYVPQRFMLPSVDTATVWGVR 195
Query: 189 CAIGREREAAVCLMQKCIDK-----GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKG 243
C G+E++ L++K + +L+I S+ D IYIEA K++ +++ C G
Sbjct: 196 CRPGKEKDLVKKLLKKKFNLDKSMGSKKLKILSIFQRDSFSGRIYIEAPKQSVIEKFCNG 255
Query: 244 LRNIYSQKVMLVPIREMTDVLA-VESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQR 302
+ +IY + +L+P++E+ +L +S + L ++VR+K G YKGDLA V + +
Sbjct: 256 VPDIYVNQKLLIPVQELPLLLKPSKSDDVRLEPGSYVRIKRGIYKGDLAVVEQLSDNNLE 315
Query: 303 VTVKLIPRIDL--QALANKLEGREVAKKKPFV--PPPRFMN------VDEARELHIRVER 352
+K++PR+D + ++ AKK F PPP+ N +D+A L+ R E+
Sbjct: 316 CMLKVVPRLDYGKNDEVDPDTQQKKAKKVSFAQRPPPQLFNPTMALRMDQA-NLYKRDEK 374
Query: 353 RRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIAS 412
DY DG+L K ++ + NI PT +EL +F + ++G D+ +
Sbjct: 375 HFTYRNEDYI---------DGYLIKVFKIQYLKTANIHPTVEELARFGS--KDGAVDLTT 423
Query: 413 LSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAVN 469
+S A K F GD V ++ G+ + KG+V + + + + + G K L
Sbjct: 424 ISQTIKKAQASKAMFQPGDRVEILNGEQRGSKGYVTRTSTDIISV--SLTGFNAKPLGFP 481
Query: 470 SKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEV 529
L K FEPG+HV V+SG G G+VL V+ + +SD T+E++ + A+++ +S +
Sbjct: 482 VSSLRKIFEPGDHVSVMSGDHQGDAGLVLIVKNGQVTFVSDQTRENLTISANNLTKSMDS 541
Query: 530 TTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVK----LREIKC 585
T + DY L D+V L + +I+ + F+VL D +V+ V L++I
Sbjct: 542 TPTSS---DYALHDIVELSAKNVACVIQAGHDIFKVLD---DSGKVSTVTKGSILKKINT 595
Query: 586 KLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICA 645
+ + V D N + + D V VE ++G V ++ +FI + +E+AG
Sbjct: 596 TRSRIAAV-DGNGKEIKIGDTV--VEKVGARREGQVLYVQSHQIFIVSKKIVENAGVFVV 652
Query: 646 KSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHD 705
+ V R S+ + + P I G S+ P G D
Sbjct: 653 NPMNVEAV------ASRENLIASKLDLTKMNPEIAAKMGPPSQTAQPVS-------VGRD 699
Query: 706 ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS 753
+ TV++R YKG G V DV G VEL S+ K +TVD+ ++
Sbjct: 700 VALNKTVRIRSAGYKGQLGIVKDVNGDMATVELHSKNKHITVDKRKLT 747
>sp|Q6BZG0|SPT5_DEBHA Transcription elongation factor SPT5 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=SPT5 PE=3 SV=2
Length = 967
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 224/895 (25%), Positives = 358/895 (40%), Gaps = 191/895 (21%)
Query: 115 DGGAELPDEDGGRGIHRRPLLPREDEQEDVEALERRIQARYARSSHTEYDEETT---DVE 171
D E D+ R RR +E E +D E L ++ RY R +HT Y +TT V
Sbjct: 180 DSAGEHQDDRLHRQFDRRR---QEAEDQDAEVLAETLKQRY-RKTHTVYRGDTTASGTVS 235
Query: 172 QQALLPSVRDPKLWMVKCAIGREREAAVCLMQK--CIDKGSELQIRSVIALDHLKNYIYI 229
Q+ L+PS+ DP ++ ++C GRE++ L +K + + + L+I +V D K YIYI
Sbjct: 236 QKLLMPSINDPAIYAIRCTPGREKDLVRKLYEKKRTLARSNPLEILTVFQRDSFKGYIYI 295
Query: 230 EADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKAIDLSRDTWVRMKIGNYKG 288
EA K ++ A G+ NIY+++ +LVP+RE D+L V+S +++ +VR+ G YK
Sbjct: 296 EAKKPEAIERALTGMVNIYAKQRLLVPVREYPDLLKQVKSSDVEIVPGIYVRITRGKYKN 355
Query: 289 DLAKVVDVDNVRQRVTVKLIPRIDLQALAN-KLEGREVAKKKPFVPPPRFMNVDEARELH 347
DLA V ++ V KL+PR+D + +G+ + K P PR + EAR
Sbjct: 356 DLAIVDNLSENGLDVRCKLVPRLDYGKNDDFDKDGKRIRSKTK--PIPRLFSEQEARMYD 413
Query: 348 IR-VERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRT--PGE 404
++ R P Y G + +GFL+K ++ I +++ P +EL++F+T P E
Sbjct: 414 GEYLQSGRGPRAFIYR----GEEYNEGFLFKDFKLQFIQTKDVHPKLEELDRFQTGDPEE 469
Query: 405 NGESDIASLSTLFANR-------KKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP 457
+G D+A+++ N+ + F GD V + +G+ G V + I
Sbjct: 470 DG-LDLAAIAASLKNKNNSEGAGRSSAFQPGDKVEIRRGEQAKTIGKVLSTSLNEITILV 528
Query: 458 EMKGLPK----TLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTK 513
G PK L V + +L K F G+HV+V+ G + TG+V+K+
Sbjct: 529 TDSGDPKFVNQRLTVPANDLRKLFSAGDHVRVIEGKHSDETGLVIKI------------- 575
Query: 514 EDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNS---------------------- 551
DN+S
Sbjct: 576 ----------------------------------DNDSVILLSDQTKQDVRVFANYLIKA 601
Query: 552 --------------------------FGVIIRVESEAFQVLKGVPDRPEVALVKLREIKC 585
GVI++ E +F+VL + V I
Sbjct: 602 TDASSNTDVTGGKYDLNDLVQLNVSTVGVIVKAEKSSFEVL---TSEGRLMSVNPAGIAS 658
Query: 586 KLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAG- 641
KLE ++ DRN +TV + D V+ V G K ++G + HIY+ LFI LE+ G
Sbjct: 659 KLELSRREQIATDRNGSTVKIGDTVKEVLGDKK-REGAILHIYKNSLFIKSNEILENLGV 717
Query: 642 FICAKSSSCVVVGGSRANGDRNGDAYSRFN-SLRTPPRIPQSPGRYSRGGPPAGGRNRGG 700
F+ + + G +R N +L+ P I AG + R
Sbjct: 718 FVTNCMNVSTITTKDSIVSKSLGPDLNRMNPNLKLPNPIAN-----------AGLKTR-- 764
Query: 701 RGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVV-- 758
GG D L+ V V G YKG G+V + R+EL ++ K + V ++ +S V+V
Sbjct: 765 VGGRDKLIYKDVLVNSGNYKGLMGKVTEADEVYARIELHTKSKKIKVTKNSLS--VLVRG 822
Query: 759 -STPYRYIELFFILFYHFLMLKLTVHVIMFCSDTPRYGMGSETPMHPSRTPLH--PYMTP 815
+ PY L+ + P G + P++TP +
Sbjct: 823 EAIPY---------------LRFIGASSGPGNSNPSGNFGGASFNQPAKTPAFSSGGKSS 867
Query: 816 MRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW--GTSPQYQPGSPPSRA 873
GATP G T AW G SW G +P Y G+ +
Sbjct: 868 WGSGGATPSVGGGAT-----AWGS------------GGAQSSWGGGKTPAYNSGNASTWG 910
Query: 874 YEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASY 928
A S W + G + ++ S+ S + S GG+ N +++
Sbjct: 911 GNAG-GASAWGNNNGNASTWGSNSKNGGSSTWGGNSTWGNSNKGGKSSWGNGSAW 964
>sp|Q9Y9W3|NUSG_AERPE Putative transcription antitermination protein NusG OS=Aeropyrum
pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC
100138 / K1) GN=APE_2176.1 PE=3 SV=2
Length = 151
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 181 DPKLWMVKCAIGREREAAVCLMQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEA 240
D + + + G E A + ++ G L IRS+I +K Y+ +EA V +A
Sbjct: 6 DARFYAILVTSGAEVNVATIIAERARALG--LDIRSIIVPPRIKGYVILEAHDPGDVYDA 63
Query: 241 CKGLRNIYSQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVR 300
+GLR++ ++ +++ E+ ++ E + L V + G +KG A+V+DV+ +
Sbjct: 64 TRGLRHVKRRRPLILKFEEVMKLVKPEVEIPALKPGQVVEIVAGAFKGMKARVIDVNQSK 123
Query: 301 QRVTVKLI 308
+VTV L+
Sbjct: 124 GQVTVSLL 131
>sp|Q57818|NUSG_METJA Putative transcription antitermination protein NusG
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0372
PE=1 SV=1
Length = 147
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 184 LWMVKCAIGREREAAVCLMQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKG 243
++ V+ +G+E+ A + + + +L + S++A + LK Y+ +EA+ + V+E KG
Sbjct: 2 IFAVRTMVGQEKNIAGLMASRA--EKEQLDVYSILASESLKGYVLVEAETKGDVEELIKG 59
Query: 244 LRNIYSQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRV 303
+ + + I E+ +L + ++ + V + G +KG+ AKV+ VD ++ V
Sbjct: 60 MPRVRGIVPGTIAIEEIEPLLTPKKIIENIEKGDVVEIIAGPFKGERAKVIRVDKHKEEV 119
Query: 304 TVKL 307
T++L
Sbjct: 120 TLEL 123
>sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens GN=POLR2A
PE=1 SV=2
Length = 1970
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 840 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 899
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 900 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 954
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 955 DN 956
D+
Sbjct: 1964 DD 1965
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 18/116 (15%)
Query: 787 FCSDTPRYGMGSET--PMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMS 844
+ +P+Y S T P P +P P +P +P++ TP + Y+P S
Sbjct: 1867 YSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP-----TSPVY----TPTSPK----YSPTS 1913
Query: 845 PPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDS 900
P + +P TSP Y P SP Y +PG S S A +P DS
Sbjct: 1914 P---TYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDS 1966
>sp|P08775|RPB1_MOUSE DNA-directed RNA polymerase II subunit RPB1 OS=Mus musculus GN=Polr2a
PE=1 SV=3
Length = 1970
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 840 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 899
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPASP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 900 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 954
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 955 DN 956
D+
Sbjct: 1964 DD 1965
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 18/116 (15%)
Query: 787 FCSDTPRYGMGSET--PMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMS 844
+ +P+Y S T P P +P P +P +P++ TP + Y+P S
Sbjct: 1867 YSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP-----TSPVY----TPTSPK----YSPTS 1913
Query: 845 PPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDS 900
P + +P TSP Y P SP Y +PG S S A +P DS
Sbjct: 1914 P---TYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDS 1966
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 454,289,780
Number of Sequences: 539616
Number of extensions: 23442724
Number of successful extensions: 191712
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 2032
Number of HSP's that attempted gapping in prelim test: 107657
Number of HSP's gapped (non-prelim): 36215
length of query: 1065
length of database: 191,569,459
effective HSP length: 128
effective length of query: 937
effective length of database: 122,498,611
effective search space: 114781198507
effective search space used: 114781198507
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)