Query 001507
Match_columns 1065
No_of_seqs 670 out of 4893
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 02:33:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001507.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001507hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 1E-169 2E-174 1513.8 73.3 1008 16-1064 125-1155(1391)
2 PLN03140 ABC transporter G fam 100.0 1E-155 2E-160 1499.5 107.5 1048 15-1062 174-1242(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 5E-141 1E-145 1371.8 103.3 1005 16-1064 71-1129(1394)
4 KOG0055 Multidrug/pheromone ex 100.0 4.6E-77 9.9E-82 718.3 48.4 777 6-925 353-1208(1228)
5 TIGR00955 3a01204 The Eye Pigm 100.0 1.4E-75 3E-80 711.1 57.6 568 17-628 36-612 (617)
6 KOG0054 Multidrug resistance-a 100.0 2.1E-76 4.6E-81 730.8 48.7 766 10-926 525-1358(1381)
7 KOG0061 Transporter, ABC super 100.0 2.9E-75 6.3E-80 697.9 53.3 562 18-629 42-608 (613)
8 PLN03211 ABC transporter G-25; 100.0 4.9E-74 1.1E-78 695.2 59.0 563 18-628 80-657 (659)
9 TIGR01257 rim_protein retinal- 100.0 7.1E-73 1.5E-77 729.0 68.0 201 713-925 1952-2154(2272)
10 PLN03140 ABC transporter G fam 100.0 2.2E-72 4.7E-77 726.3 58.3 566 18-630 892-1467(1470)
11 COG1123 ATPase components of v 100.0 1.5E-70 3.3E-75 621.1 44.6 487 6-925 8-514 (539)
12 PLN03130 ABC transporter C fam 100.0 1.3E-70 2.8E-75 720.8 50.5 211 687-926 1237-1457(1622)
13 PLN03232 ABC transporter C fam 100.0 3E-70 6.4E-75 718.6 45.4 210 687-925 1234-1453(1495)
14 KOG0065 Pleiotropic drug resis 100.0 9.9E-71 2.2E-75 661.1 34.5 513 17-578 802-1323(1391)
15 TIGR00956 3a01205 Pleiotropic 100.0 4.9E-68 1.1E-72 690.1 57.0 559 18-628 775-1389(1394)
16 PRK13549 xylose transporter AT 100.0 2.4E-68 5.2E-73 637.3 45.2 470 6-927 8-491 (506)
17 TIGR00957 MRP_assoc_pro multi 100.0 4.9E-68 1.1E-72 698.6 50.8 211 687-926 1284-1504(1522)
18 PRK10762 D-ribose transporter 100.0 6.7E-68 1.4E-72 632.6 46.0 460 6-927 7-481 (501)
19 PRK09700 D-allose transporter 100.0 6.3E-68 1.4E-72 634.9 44.2 468 6-925 8-493 (510)
20 PRK10261 glutathione transport 100.0 1E-67 2.2E-72 642.9 46.0 500 6-925 15-548 (623)
21 PRK15439 autoinducer 2 ABC tra 100.0 2.4E-67 5.1E-72 628.0 44.2 464 6-927 14-489 (510)
22 PTZ00265 multidrug resistance 100.0 1.1E-66 2.4E-71 677.4 53.4 216 687-925 1165-1447(1466)
23 PRK15134 microcin C ABC transp 100.0 4.1E-67 9E-72 630.0 45.5 478 6-925 8-510 (529)
24 TIGR03269 met_CoM_red_A2 methy 100.0 6.4E-67 1.4E-71 627.7 45.9 454 7-925 4-512 (520)
25 TIGR02633 xylG D-xylose ABC tr 100.0 1.3E-66 2.8E-71 622.6 46.2 469 7-926 5-488 (500)
26 PRK11288 araG L-arabinose tran 100.0 1.1E-66 2.5E-71 622.0 43.9 461 6-927 7-482 (501)
27 PTZ00243 ABC transporter; Prov 100.0 2E-65 4.4E-70 671.3 55.0 210 687-925 1308-1528(1560)
28 TIGR01271 CFTR_protein cystic 100.0 9E-65 1.9E-69 665.4 58.0 209 687-925 1217-1435(1490)
29 PRK10982 galactose/methyl gala 100.0 9.3E-66 2E-70 613.3 43.4 459 8-926 3-476 (491)
30 COG4172 ABC-type uncharacteriz 100.0 2.4E-64 5.2E-69 533.0 39.6 482 6-925 9-511 (534)
31 PRK10938 putative molybdenum t 100.0 1.1E-64 2.3E-69 604.5 37.9 458 6-923 6-485 (490)
32 PRK11819 putative ABC transpor 100.0 9.3E-62 2E-66 585.2 48.4 190 711-924 335-527 (556)
33 KOG0061 Transporter, ABC super 100.0 2.7E-63 5.9E-68 594.8 33.5 358 684-1063 22-388 (613)
34 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.5E-61 5.3E-66 581.7 46.9 189 712-924 334-525 (552)
35 PRK15064 ABC transporter ATP-b 100.0 1.1E-60 2.3E-65 574.6 48.8 198 687-925 319-520 (530)
36 COG1129 MglA ABC-type sugar tr 100.0 9.2E-60 2E-64 530.3 41.6 462 6-926 11-486 (500)
37 PRK13409 putative ATPase RIL; 100.0 1.2E-59 2.7E-64 562.8 40.0 197 715-939 354-554 (590)
38 PRK10636 putative ABC transpor 100.0 5.1E-59 1.1E-63 566.7 44.2 186 711-925 323-512 (638)
39 PRK11147 ABC transporter ATPas 100.0 1.9E-58 4.1E-63 563.7 46.4 191 711-925 330-523 (635)
40 PLN03211 ABC transporter G-25; 100.0 5.2E-57 1.1E-61 546.8 38.2 368 684-1063 36-437 (659)
41 PLN03073 ABC transporter F fam 100.0 5.2E-56 1.1E-60 540.1 43.0 200 687-925 508-709 (718)
42 COG0488 Uup ATPase components 100.0 4.5E-56 9.7E-61 516.2 40.0 230 6-265 6-237 (530)
43 TIGR00955 3a01204 The Eye Pigm 100.0 9.4E-57 2E-61 546.3 34.8 346 711-1063 36-391 (617)
44 COG3845 ABC-type uncharacteriz 100.0 1.6E-55 3.5E-60 483.3 38.6 464 8-927 9-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 6.4E-48 1.4E-52 380.0 21.8 211 704-925 6-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 6.6E-48 1.4E-52 380.0 16.6 229 7-289 6-238 (240)
47 KOG0927 Predicted transporter 100.0 1.3E-45 2.8E-50 405.6 28.2 203 685-925 387-591 (614)
48 COG1125 OpuBA ABC-type proline 100.0 1.1E-45 2.4E-50 370.8 17.3 219 6-268 4-225 (309)
49 COG1127 Ttg2A ABC-type transpo 100.0 1.2E-44 2.6E-49 362.7 19.6 221 708-939 16-248 (263)
50 COG1135 AbcC ABC-type metal io 100.0 6.3E-45 1.4E-49 377.4 17.6 224 17-291 17-246 (339)
51 COG1135 AbcC ABC-type metal io 100.0 1.5E-44 3.2E-49 374.7 18.9 203 712-926 18-227 (339)
52 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.8E-44 2.1E-48 369.1 24.3 218 687-927 4-224 (254)
53 COG1120 FepC ABC-type cobalami 100.0 2.3E-44 5E-49 376.2 19.6 209 710-927 12-225 (258)
54 COG1116 TauB ABC-type nitrate/ 100.0 4.2E-44 9.1E-49 365.7 20.3 194 710-916 13-207 (248)
55 COG1125 OpuBA ABC-type proline 100.0 3.9E-44 8.4E-49 359.6 17.9 208 707-926 8-221 (309)
56 COG1131 CcmA ABC-type multidru 100.0 1.6E-43 3.4E-48 388.9 24.2 206 708-925 12-221 (293)
57 COG3839 MalK ABC-type sugar tr 100.0 2.5E-44 5.5E-49 390.5 16.5 231 4-288 4-235 (338)
58 COG3638 ABC-type phosphate/pho 100.0 6.5E-44 1.4E-48 356.4 17.5 210 711-929 15-236 (258)
59 COG1118 CysA ABC-type sulfate/ 100.0 8.3E-44 1.8E-48 367.8 17.9 217 7-267 6-226 (345)
60 COG1136 SalX ABC-type antimicr 100.0 7.2E-43 1.6E-47 357.8 23.3 193 713-918 18-219 (226)
61 COG1118 CysA ABC-type sulfate/ 100.0 1.8E-43 4E-48 365.3 18.3 209 708-926 10-223 (345)
62 COG3842 PotA ABC-type spermidi 100.0 6.2E-44 1.3E-48 389.6 15.4 232 6-290 8-240 (352)
63 COG1116 TauB ABC-type nitrate/ 100.0 2.5E-43 5.4E-48 360.1 17.6 200 8-255 8-207 (248)
64 COG4555 NatA ABC-type Na+ tran 100.0 2.1E-43 4.5E-48 342.2 15.3 201 714-926 16-218 (245)
65 COG1127 Ttg2A ABC-type transpo 100.0 4.7E-43 1E-47 351.2 16.9 212 16-268 18-235 (263)
66 COG1120 FepC ABC-type cobalami 100.0 2.3E-43 5E-48 368.7 15.4 219 7-267 6-227 (258)
67 COG3839 MalK ABC-type sugar tr 100.0 7.6E-43 1.6E-47 379.0 19.7 205 710-926 13-219 (338)
68 COG1117 PstB ABC-type phosphat 100.0 3.6E-43 7.8E-48 344.2 15.3 231 6-287 10-248 (253)
69 COG4555 NatA ABC-type Na+ tran 100.0 3.4E-43 7.3E-48 340.7 14.8 216 7-268 5-222 (245)
70 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 6.5E-43 1.4E-47 363.0 17.4 218 5-267 6-226 (254)
71 COG3842 PotA ABC-type spermidi 100.0 7.9E-43 1.7E-47 380.9 18.9 209 707-926 12-222 (352)
72 COG1131 CcmA ABC-type multidru 100.0 2.8E-42 6.1E-47 379.0 21.5 220 7-271 8-229 (293)
73 COG2884 FtsE Predicted ATPase 100.0 5.6E-42 1.2E-46 329.7 19.1 199 713-924 15-220 (223)
74 COG1117 PstB ABC-type phosphat 100.0 4E-42 8.6E-47 336.9 18.1 206 711-925 18-232 (253)
75 COG3638 ABC-type phosphate/pho 100.0 2.6E-42 5.6E-47 344.9 15.9 225 7-268 7-237 (258)
76 COG1136 SalX ABC-type antimicr 100.0 2.7E-41 5.8E-46 346.2 20.8 207 8-257 6-220 (226)
77 PRK13537 nodulation ABC transp 100.0 2.4E-40 5.2E-45 367.7 27.0 203 711-925 18-222 (306)
78 COG1137 YhbG ABC-type (unclass 100.0 6.6E-42 1.4E-46 331.4 11.8 213 704-926 8-224 (243)
79 COG2884 FtsE Predicted ATPase 100.0 7E-41 1.5E-45 322.1 18.0 211 6-262 4-220 (223)
80 COG1124 DppF ABC-type dipeptid 100.0 3.4E-41 7.4E-46 340.2 16.0 219 6-268 6-231 (252)
81 COG3840 ThiQ ABC-type thiamine 100.0 1.9E-40 4.2E-45 315.9 18.4 196 718-925 17-214 (231)
82 TIGR02314 ABC_MetN D-methionin 100.0 9.1E-40 2E-44 365.3 26.6 201 713-925 18-225 (343)
83 PRK11650 ugpC glycerol-3-phosp 100.0 4.5E-40 9.8E-45 371.2 23.9 203 712-926 16-220 (356)
84 TIGR03265 PhnT2 putative 2-ami 100.0 6.1E-40 1.3E-44 369.7 24.4 204 711-926 15-220 (353)
85 PRK11432 fbpC ferric transport 100.0 6.9E-40 1.5E-44 368.4 24.2 204 711-926 17-222 (351)
86 COG1124 DppF ABC-type dipeptid 100.0 3E-40 6.4E-45 333.4 18.8 199 714-926 21-227 (252)
87 PRK11650 ugpC glycerol-3-phosp 100.0 1.3E-40 2.9E-45 375.5 18.1 217 6-267 6-223 (356)
88 cd03261 ABC_Org_Solvent_Resist 100.0 1.1E-39 2.3E-44 351.5 24.2 204 711-925 11-221 (235)
89 COG1122 CbiO ABC-type cobalt t 100.0 5.9E-40 1.3E-44 344.4 21.2 201 713-925 17-223 (235)
90 COG3840 ThiQ ABC-type thiamine 100.0 3.2E-40 7E-45 314.4 16.8 201 24-267 17-218 (231)
91 PRK13536 nodulation factor exp 100.0 1.4E-39 3E-44 364.9 24.9 204 710-925 51-256 (340)
92 KOG0062 ATPase component of AB 100.0 1E-39 2.3E-44 357.3 23.0 186 714-924 378-563 (582)
93 TIGR03258 PhnT 2-aminoethylpho 100.0 1.2E-39 2.5E-44 367.7 24.0 204 711-926 16-224 (362)
94 PRK11432 fbpC ferric transport 100.0 2.6E-40 5.7E-45 371.9 18.7 216 6-267 9-225 (351)
95 TIGR02314 ABC_MetN D-methionin 100.0 4E-40 8.6E-45 368.2 19.9 219 6-267 4-229 (343)
96 COG1122 CbiO ABC-type cobalt t 100.0 2.3E-40 4.9E-45 347.6 16.4 216 7-267 7-227 (235)
97 TIGR01188 drrA daunorubicin re 100.0 1.6E-39 3.5E-44 361.9 24.2 203 711-925 4-208 (302)
98 TIGR03265 PhnT2 putative 2-ami 100.0 3.8E-40 8.3E-45 371.3 18.3 216 6-267 7-223 (353)
99 TIGR03258 PhnT 2-aminoethylpho 100.0 5.5E-40 1.2E-44 370.3 19.4 216 7-267 9-227 (362)
100 TIGR01186 proV glycine betaine 100.0 2.6E-39 5.6E-44 363.3 24.6 205 710-926 3-215 (363)
101 PRK10851 sulfate/thiosulfate t 100.0 2.1E-39 4.6E-44 365.3 24.0 207 711-926 13-222 (353)
102 KOG0058 Peptide exporter, ABC 100.0 1.3E-40 2.7E-45 381.9 14.1 221 6-268 468-691 (716)
103 COG0411 LivG ABC-type branched 100.0 6.3E-40 1.4E-44 331.5 17.6 214 704-926 8-235 (250)
104 PRK13537 nodulation ABC transp 100.0 8.1E-40 1.7E-44 363.5 19.7 216 6-268 10-227 (306)
105 TIGR01186 proV glycine betaine 100.0 1.2E-39 2.6E-44 366.0 21.3 208 18-268 5-219 (363)
106 cd03259 ABC_Carb_Solutes_like 100.0 3.1E-39 6.8E-44 342.5 23.2 200 712-923 12-213 (213)
107 PRK09452 potA putrescine/sperm 100.0 3.1E-39 6.7E-44 365.4 24.1 213 688-925 15-229 (375)
108 COG0411 LivG ABC-type branched 100.0 6.3E-40 1.4E-44 331.5 16.2 228 7-268 8-239 (250)
109 COG1137 YhbG ABC-type (unclass 100.0 1.2E-40 2.6E-45 322.6 10.3 217 7-268 8-228 (243)
110 cd03293 ABC_NrtD_SsuB_transpor 100.0 7.5E-39 1.6E-43 341.2 24.6 200 713-925 17-218 (220)
111 TIGR00960 3a0501s02 Type II (G 100.0 6.3E-39 1.4E-43 340.9 23.8 194 713-918 16-215 (216)
112 COG0410 LivF ABC-type branched 100.0 1.4E-39 3E-44 326.5 17.4 216 6-268 6-226 (237)
113 PRK09452 potA putrescine/sperm 100.0 1.2E-39 2.7E-44 368.7 19.2 215 7-267 18-233 (375)
114 cd03265 ABC_DrrA DrrA is the A 100.0 7.2E-39 1.6E-43 341.3 23.6 203 711-925 11-216 (220)
115 TIGR01288 nodI ATP-binding ABC 100.0 6.6E-39 1.4E-43 357.2 24.2 203 711-925 15-219 (303)
116 cd03269 ABC_putative_ATPase Th 100.0 7.4E-39 1.6E-43 338.8 23.3 199 712-923 12-210 (210)
117 PRK11607 potG putrescine trans 100.0 6.5E-39 1.4E-43 363.6 24.4 203 712-926 31-235 (377)
118 COG0410 LivF ABC-type branched 100.0 3.3E-39 7.2E-44 323.7 19.3 209 705-926 8-222 (237)
119 PRK11000 maltose/maltodextrin 100.0 8.3E-39 1.8E-43 363.6 24.1 204 711-926 14-219 (369)
120 COG4152 ABC-type uncharacteriz 100.0 2.8E-39 6.1E-44 322.4 17.6 209 704-925 6-214 (300)
121 PRK09536 btuD corrinoid ABC tr 100.0 8.1E-39 1.8E-43 363.6 23.4 207 711-926 14-224 (402)
122 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-38 3.2E-43 343.2 24.0 205 712-925 12-227 (236)
123 cd03301 ABC_MalK_N The N-termi 100.0 1.5E-38 3.2E-43 337.5 23.5 200 712-923 12-213 (213)
124 PRK11153 metN DL-methionine tr 100.0 1.5E-38 3.3E-43 358.8 24.6 202 712-925 17-225 (343)
125 PRK10851 sulfate/thiosulfate t 100.0 3.3E-39 7.1E-44 363.8 19.1 219 7-267 6-225 (353)
126 cd03218 ABC_YhbG The ABC trans 100.0 1.6E-38 3.4E-43 342.0 23.7 203 711-925 11-217 (232)
127 cd03268 ABC_BcrA_bacitracin_re 100.0 1.2E-38 2.7E-43 336.6 22.2 196 712-923 12-208 (208)
128 cd03296 ABC_CysA_sulfate_impor 100.0 2E-38 4.4E-43 342.2 24.3 205 712-925 14-221 (239)
129 TIGR03522 GldA_ABC_ATP gliding 100.0 1.7E-38 3.6E-43 353.2 24.4 202 711-925 13-216 (301)
130 cd03260 ABC_PstB_phosphate_tra 100.0 1.4E-38 3E-43 341.1 22.6 204 711-925 11-224 (227)
131 cd03266 ABC_NatA_sodium_export 100.0 1.5E-38 3.2E-43 338.8 22.6 198 714-923 19-218 (218)
132 COG1245 Predicted ATPase, RNas 100.0 7.1E-38 1.5E-42 336.9 27.7 193 720-940 361-557 (591)
133 COG4559 ABC-type hemin transpo 100.0 7.1E-39 1.5E-43 313.2 18.3 206 711-926 12-226 (259)
134 TIGR01257 rim_protein retinal- 100.0 5.1E-36 1.1E-40 388.4 50.2 201 712-925 942-1144(2272)
135 cd03226 ABC_cobalt_CbiO_domain 100.0 1E-38 2.2E-43 336.3 20.8 192 713-920 13-205 (205)
136 TIGR01188 drrA daunorubicin re 100.0 7.2E-39 1.6E-43 356.7 20.3 206 19-268 6-213 (302)
137 PRK11607 potG putrescine trans 100.0 6.1E-39 1.3E-43 363.8 20.0 215 7-267 23-238 (377)
138 PRK11000 maltose/maltodextrin 100.0 3.6E-39 7.8E-44 366.6 18.1 216 6-267 6-222 (369)
139 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.7E-38 3.6E-43 338.4 21.9 193 713-918 17-217 (218)
140 COG4175 ProV ABC-type proline/ 100.0 3.2E-39 6.9E-44 333.5 15.3 221 19-290 41-268 (386)
141 cd03261 ABC_Org_Solvent_Resist 100.0 1.9E-38 4E-43 341.8 21.7 215 7-266 4-224 (235)
142 cd03258 ABC_MetN_methionine_tr 100.0 2.8E-38 6.2E-43 340.1 23.0 200 714-925 19-225 (233)
143 PRK13536 nodulation factor exp 100.0 1.6E-38 3.5E-43 356.3 21.6 215 7-268 45-261 (340)
144 cd03256 ABC_PhnC_transporter A 100.0 2.6E-38 5.6E-43 342.6 22.4 204 713-925 14-229 (241)
145 PRK11153 metN DL-methionine tr 100.0 1.2E-38 2.5E-43 359.7 20.0 219 6-267 4-229 (343)
146 cd03263 ABC_subfamily_A The AB 100.0 4.2E-38 9.1E-43 335.8 22.7 200 713-925 15-216 (220)
147 PRK09493 glnQ glutamine ABC tr 100.0 5.5E-38 1.2E-42 339.3 23.9 203 712-925 13-220 (240)
148 cd03234 ABCG_White The White s 100.0 1.1E-37 2.4E-42 333.5 25.8 206 712-923 19-226 (226)
149 PRK13637 cbiO cobalt transport 100.0 5E-38 1.1E-42 347.0 23.9 201 713-925 20-229 (287)
150 cd03259 ABC_Carb_Solutes_like 100.0 1.4E-38 3.1E-43 337.4 18.8 209 7-261 4-213 (213)
151 PRK11248 tauB taurine transpor 100.0 6.7E-38 1.5E-42 340.1 24.4 201 712-925 13-215 (255)
152 cd03224 ABC_TM1139_LivF_branch 100.0 4.7E-38 1E-42 336.1 22.5 201 711-925 11-216 (222)
153 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.3E-38 1.6E-42 342.9 24.2 207 707-925 31-245 (269)
154 PRK11629 lolD lipoprotein tran 100.0 1.2E-37 2.7E-42 334.7 25.5 200 713-925 22-229 (233)
155 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.7E-38 1.5E-42 338.8 23.5 201 713-925 14-220 (242)
156 TIGR02673 FtsE cell division A 100.0 4.8E-38 1E-42 333.9 21.9 193 712-915 14-212 (214)
157 PRK11264 putative amino-acid A 100.0 7.2E-38 1.6E-42 340.7 23.7 203 712-925 15-228 (250)
158 TIGR02315 ABC_phnC phosphonate 100.0 3.7E-38 8E-43 341.6 20.8 206 712-926 14-231 (243)
159 PRK11831 putative ABC transpor 100.0 1E-37 2.2E-42 342.1 24.4 203 712-925 19-228 (269)
160 cd03292 ABC_FtsE_transporter F 100.0 5.7E-38 1.2E-42 333.4 21.8 194 713-918 14-213 (214)
161 PRK13647 cbiO cobalt transport 100.0 1.5E-37 3.2E-42 341.2 25.3 201 713-925 18-222 (274)
162 cd03264 ABC_drug_resistance_li 100.0 8.6E-38 1.9E-42 331.0 22.2 198 712-923 12-211 (211)
163 cd03235 ABC_Metallic_Cations A 100.0 5.4E-38 1.2E-42 333.1 20.7 201 711-923 10-213 (213)
164 PRK13651 cobalt transporter AT 100.0 1.3E-37 2.9E-42 344.9 24.5 202 713-926 20-250 (305)
165 PRK13634 cbiO cobalt transport 100.0 1.4E-37 3.1E-42 343.9 24.7 201 713-925 20-230 (290)
166 PRK10908 cell division protein 100.0 1.2E-37 2.6E-42 332.4 23.1 196 713-920 15-216 (222)
167 COG2274 SunT ABC-type bacterio 100.0 3.1E-36 6.6E-41 361.9 37.9 213 685-925 469-691 (709)
168 cd03265 ABC_DrrA DrrA is the A 100.0 4.8E-38 1E-42 335.0 20.0 204 19-265 13-218 (220)
169 PRK13637 cbiO cobalt transport 100.0 3.6E-38 7.8E-43 348.1 19.5 218 7-267 6-233 (287)
170 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.7E-38 1E-42 335.1 19.8 212 7-263 4-218 (220)
171 PRK10895 lipopolysaccharide AB 100.0 1.2E-37 2.7E-42 336.8 23.2 204 711-925 14-221 (241)
172 cd03296 ABC_CysA_sulfate_impor 100.0 4E-38 8.8E-43 339.9 19.2 219 6-266 5-224 (239)
173 COG4525 TauB ABC-type taurine 100.0 6.2E-38 1.3E-42 301.8 18.2 219 5-269 5-225 (259)
174 cd03225 ABC_cobalt_CbiO_domain 100.0 8.6E-38 1.9E-42 331.1 21.3 192 713-915 14-209 (211)
175 cd03262 ABC_HisP_GlnQ_permease 100.0 8.1E-38 1.8E-42 332.0 21.0 196 712-918 12-212 (213)
176 KOG0066 eIF2-interacting prote 100.0 6.6E-37 1.4E-41 325.3 27.7 188 711-926 598-787 (807)
177 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9.5E-38 2.1E-42 342.0 21.9 214 8-267 29-249 (269)
178 COG4525 TauB ABC-type taurine 100.0 7.7E-38 1.7E-42 301.1 18.3 200 713-925 18-219 (259)
179 KOG0058 Peptide exporter, ABC 100.0 1.6E-38 3.4E-43 364.8 15.8 214 685-925 463-686 (716)
180 PRK11247 ssuB aliphatic sulfon 100.0 1.4E-37 3E-42 336.8 22.3 206 687-925 12-218 (257)
181 PRK13643 cbiO cobalt transport 100.0 2.9E-37 6.2E-42 341.1 25.3 201 713-926 19-229 (288)
182 cd03258 ABC_MetN_methionine_tr 100.0 5.9E-38 1.3E-42 337.6 19.3 217 7-266 5-228 (233)
183 COG4181 Predicted ABC-type tra 100.0 7.2E-38 1.6E-42 295.0 17.3 199 710-921 20-226 (228)
184 TIGR01288 nodI ATP-binding ABC 100.0 8.7E-38 1.9E-42 348.2 21.2 215 7-268 8-224 (303)
185 PRK10619 histidine/lysine/argi 100.0 2.7E-37 5.8E-42 337.1 24.6 202 712-925 17-236 (257)
186 TIGR03740 galliderm_ABC gallid 100.0 3.1E-37 6.8E-42 329.5 24.5 198 712-926 12-209 (223)
187 cd03257 ABC_NikE_OppD_transpor 100.0 1.8E-37 3.9E-42 333.1 22.7 200 714-923 19-228 (228)
188 TIGR00960 3a0501s02 Type II (G 100.0 2.9E-38 6.4E-43 335.8 16.5 206 7-257 5-216 (216)
189 PRK13631 cbiO cobalt transport 100.0 2.9E-37 6.4E-42 344.0 25.0 218 687-925 21-260 (320)
190 PRK10070 glycine betaine trans 100.0 2.5E-37 5.4E-42 351.2 24.6 203 711-925 39-249 (400)
191 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.6E-37 7.9E-42 331.8 24.6 201 712-925 13-216 (236)
192 cd03301 ABC_MalK_N The N-termi 100.0 7.4E-38 1.6E-42 332.1 19.0 209 7-261 4-213 (213)
193 cd03219 ABC_Mj1267_LivG_branch 100.0 1E-37 2.2E-42 336.7 20.3 223 7-266 4-230 (236)
194 TIGR00972 3a0107s01c2 phosphat 100.0 2.9E-37 6.4E-42 334.9 23.8 203 712-925 13-227 (247)
195 PRK13634 cbiO cobalt transport 100.0 7.3E-38 1.6E-42 346.2 19.1 219 6-267 5-234 (290)
196 PRK13646 cbiO cobalt transport 100.0 3.4E-37 7.4E-42 340.5 24.4 200 713-925 20-230 (286)
197 PRK13641 cbiO cobalt transport 100.0 2.5E-37 5.4E-42 341.8 23.3 201 713-925 20-229 (287)
198 PRK13636 cbiO cobalt transport 100.0 4.9E-37 1.1E-41 338.7 25.4 215 688-926 6-227 (283)
199 PRK13650 cbiO cobalt transport 100.0 3.2E-37 7E-42 339.4 23.9 200 713-925 20-224 (279)
200 PRK15079 oligopeptide ABC tran 100.0 6.5E-37 1.4E-41 342.5 26.7 204 712-925 33-246 (331)
201 PRK13650 cbiO cobalt transport 100.0 9E-38 1.9E-42 343.8 19.4 218 6-267 7-228 (279)
202 cd03226 ABC_cobalt_CbiO_domain 100.0 8.1E-38 1.8E-42 329.4 18.0 202 7-258 3-205 (205)
203 TIGR03415 ABC_choXWV_ATP choli 100.0 3.8E-37 8.3E-42 347.1 24.6 205 710-926 34-250 (382)
204 PRK11614 livF leucine/isoleuci 100.0 2.5E-37 5.5E-42 333.4 22.2 200 712-925 17-221 (237)
205 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 6.6E-38 1.4E-42 333.8 17.4 207 7-257 4-218 (218)
206 TIGR02211 LolD_lipo_ex lipopro 100.0 3.9E-37 8.4E-42 328.6 23.4 195 713-920 18-220 (221)
207 TIGR03522 GldA_ABC_ATP gliding 100.0 1.4E-37 3E-42 345.9 20.6 214 7-268 6-221 (301)
208 cd03263 ABC_subfamily_A The AB 100.0 7.6E-38 1.6E-42 333.8 17.7 214 7-266 4-219 (220)
209 PRK10070 glycine betaine trans 100.0 1.5E-37 3.4E-42 352.9 21.0 206 19-267 41-253 (400)
210 cd03260 ABC_PstB_phosphate_tra 100.0 7.6E-38 1.6E-42 335.4 17.4 213 7-265 4-226 (227)
211 TIGR01978 sufC FeS assembly AT 100.0 4.7E-37 1E-41 333.1 23.8 209 711-925 11-229 (243)
212 PRK11300 livG leucine/isoleuci 100.0 4.2E-37 9.2E-42 335.7 23.6 206 711-925 16-238 (255)
213 PRK13643 cbiO cobalt transport 100.0 1.3E-37 2.7E-42 344.0 19.6 230 7-281 5-249 (288)
214 PRK11629 lolD lipoprotein tran 100.0 1.6E-37 3.4E-42 334.0 19.6 214 6-263 8-229 (233)
215 TIGR03411 urea_trans_UrtD urea 100.0 5.5E-37 1.2E-41 332.1 24.0 205 711-925 13-226 (242)
216 cd03256 ABC_PhnC_transporter A 100.0 1.4E-37 3E-42 336.9 19.3 223 7-266 4-232 (241)
217 PRK11124 artP arginine transpo 100.0 4.4E-37 9.6E-42 332.7 23.2 202 712-925 14-225 (242)
218 TIGR03005 ectoine_ehuA ectoine 100.0 5.1E-37 1.1E-41 334.1 23.8 203 712-925 12-231 (252)
219 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.4E-37 7.4E-42 326.4 21.8 194 718-923 16-211 (211)
220 COG2274 SunT ABC-type bacterio 100.0 4.1E-38 8.9E-43 378.0 16.5 220 6-268 474-696 (709)
221 PRK13644 cbiO cobalt transport 100.0 5.8E-37 1.3E-41 336.5 24.2 200 713-925 15-219 (274)
222 PRK14268 phosphate ABC transpo 100.0 1.1E-36 2.3E-41 332.3 26.2 218 687-925 12-237 (258)
223 PRK13548 hmuV hemin importer A 100.0 4.6E-37 1E-41 334.7 23.1 203 711-925 13-225 (258)
224 cd03218 ABC_YhbG The ABC trans 100.0 2.4E-37 5.3E-42 332.7 20.7 212 8-266 5-220 (232)
225 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.4E-37 3.1E-42 336.3 18.8 215 8-267 5-224 (242)
226 COG0444 DppD ABC-type dipeptid 100.0 1.7E-37 3.7E-42 328.4 18.9 227 6-267 4-242 (316)
227 PRK15079 oligopeptide ABC tran 100.0 2.2E-37 4.8E-42 346.3 20.9 208 19-267 34-250 (331)
228 PRK14247 phosphate ABC transpo 100.0 7.4E-37 1.6E-41 332.6 24.3 209 712-925 15-229 (250)
229 PRK13635 cbiO cobalt transport 100.0 7.1E-37 1.5E-41 336.4 24.2 200 713-925 20-224 (279)
230 TIGR03415 ABC_choXWV_ATP choli 100.0 2.3E-37 5E-42 348.8 20.7 207 18-267 36-253 (382)
231 cd03266 ABC_NatA_sodium_export 100.0 1E-37 2.2E-42 332.3 16.8 211 7-261 5-218 (218)
232 KOG0057 Mitochondrial Fe/S clu 100.0 4.5E-38 9.8E-43 348.2 14.4 218 6-268 354-574 (591)
233 PRK09536 btuD corrinoid ABC tr 100.0 8.7E-38 1.9E-42 355.2 17.1 219 6-267 6-227 (402)
234 PRK10575 iron-hydroxamate tran 100.0 4.5E-37 9.8E-42 336.4 22.1 205 712-925 23-232 (265)
235 cd03269 ABC_putative_ATPase Th 100.0 2.6E-37 5.6E-42 327.0 19.3 198 19-261 13-210 (210)
236 PRK14267 phosphate ABC transpo 100.0 8.4E-37 1.8E-41 332.8 23.9 209 712-925 16-232 (253)
237 TIGR02315 ABC_phnC phosphonate 100.0 1.7E-37 3.6E-42 336.6 18.2 223 7-266 5-233 (243)
238 COG4175 ProV ABC-type proline/ 100.0 1.3E-37 2.8E-42 321.6 16.4 202 713-926 41-250 (386)
239 PRK13652 cbiO cobalt transport 100.0 1.3E-36 2.9E-41 334.4 25.6 201 713-925 17-222 (277)
240 PRK11231 fecE iron-dicitrate t 100.0 5.3E-37 1.2E-41 334.4 22.2 207 711-926 13-223 (255)
241 PRK13651 cobalt transporter AT 100.0 1.3E-37 2.8E-42 344.9 17.5 218 6-267 5-253 (305)
242 PRK13631 cbiO cobalt transport 100.0 1.8E-37 3.9E-42 345.8 18.6 217 6-267 24-264 (320)
243 TIGR01184 ntrCD nitrate transp 100.0 6.6E-37 1.4E-41 327.8 22.3 198 716-925 1-199 (230)
244 PRK14273 phosphate ABC transpo 100.0 1.7E-36 3.7E-41 330.4 25.7 214 688-925 8-233 (254)
245 TIGR03410 urea_trans_UrtE urea 100.0 6.9E-37 1.5E-41 328.6 22.3 201 711-926 11-217 (230)
246 cd03267 ABC_NatA_like Similar 100.0 1.3E-36 2.8E-41 326.9 24.3 202 710-923 31-236 (236)
247 cd03268 ABC_BcrA_bacitracin_re 100.0 4.1E-37 8.8E-42 325.0 20.1 203 8-261 5-208 (208)
248 PRK10253 iron-enterobactin tra 100.0 1.1E-36 2.4E-41 333.4 24.1 206 712-926 19-229 (265)
249 PRK13638 cbiO cobalt transport 100.0 6.9E-37 1.5E-41 336.2 22.4 202 712-925 13-220 (271)
250 PRK00349 uvrA excinuclease ABC 100.0 1.5E-35 3.3E-40 364.9 36.8 123 787-925 791-922 (943)
251 PRK09984 phosphonate/organopho 100.0 8.1E-37 1.7E-41 334.3 22.7 209 711-926 15-238 (262)
252 cd03224 ABC_TM1139_LivF_branch 100.0 4.7E-37 1E-41 328.3 20.4 211 7-266 4-219 (222)
253 PRK11264 putative amino-acid A 100.0 2.1E-37 4.7E-42 337.0 17.9 216 6-267 6-232 (250)
254 cd03233 ABC_PDR_domain1 The pl 100.0 1.9E-36 4.2E-41 317.1 24.4 196 687-923 3-202 (202)
255 COG4988 CydD ABC-type transpor 100.0 2.2E-37 4.9E-42 349.3 18.4 211 7-268 324-543 (559)
256 TIGR03873 F420-0_ABC_ATP propo 100.0 8.1E-37 1.8E-41 333.1 22.2 206 711-925 12-221 (256)
257 PRK09473 oppD oligopeptide tra 100.0 4E-37 8.6E-42 344.5 20.1 226 6-267 15-250 (330)
258 TIGR02142 modC_ABC molybdenum 100.0 1E-36 2.2E-41 345.8 23.7 194 718-925 15-216 (354)
259 PRK13639 cbiO cobalt transport 100.0 2E-36 4.4E-41 332.6 25.3 201 713-925 15-221 (275)
260 PRK14241 phosphate transporter 100.0 1.7E-36 3.6E-41 331.0 24.5 205 712-925 16-237 (258)
261 PRK13647 cbiO cobalt transport 100.0 6.3E-37 1.4E-41 336.2 21.1 215 6-266 7-225 (274)
262 cd03232 ABC_PDR_domain2 The pl 100.0 1.8E-36 3.8E-41 315.0 23.3 173 713-923 20-192 (192)
263 PRK11022 dppD dipeptide transp 100.0 2E-36 4.4E-41 338.6 25.3 207 713-925 20-238 (326)
264 PRK13646 cbiO cobalt transport 100.0 2.9E-37 6.3E-42 341.0 18.3 217 7-267 6-234 (286)
265 cd03300 ABC_PotA_N PotA is an 100.0 1.8E-36 4E-41 325.2 23.9 202 712-925 12-215 (232)
266 PRK11831 putative ABC transpor 100.0 6.3E-37 1.4E-41 335.8 20.7 216 7-267 11-232 (269)
267 PRK10584 putative ABC transpor 100.0 2.1E-36 4.6E-41 324.4 24.4 196 713-921 23-226 (228)
268 COG4559 ABC-type hemin transpo 100.0 2.8E-37 6.1E-42 302.0 15.8 208 18-267 13-229 (259)
269 TIGR03608 L_ocin_972_ABC putat 100.0 1.2E-36 2.5E-41 321.3 22.0 191 711-913 9-206 (206)
270 PRK11022 dppD dipeptide transp 100.0 3.8E-37 8.2E-42 344.5 19.2 226 6-267 6-242 (326)
271 PRK13649 cbiO cobalt transport 100.0 1.4E-36 3.1E-41 335.5 23.5 200 713-925 20-229 (280)
272 cd03297 ABC_ModC_molybdenum_tr 100.0 1.5E-36 3.2E-41 322.1 22.7 197 710-923 10-214 (214)
273 PRK09473 oppD oligopeptide tra 100.0 3.4E-36 7.4E-41 337.0 26.7 224 687-925 12-246 (330)
274 PRK11308 dppF dipeptide transp 100.0 1.7E-36 3.6E-41 339.1 24.2 202 713-925 28-239 (327)
275 PRK14245 phosphate ABC transpo 100.0 2.3E-36 4.9E-41 328.6 24.3 207 712-925 15-229 (250)
276 PRK14242 phosphate transporter 100.0 3.9E-36 8.5E-41 327.5 26.2 219 687-925 6-232 (253)
277 TIGR02769 nickel_nikE nickel i 100.0 1.8E-36 3.8E-41 331.8 23.4 203 712-925 23-235 (265)
278 TIGR01277 thiQ thiamine ABC tr 100.0 2.1E-36 4.5E-41 320.6 23.2 198 715-924 13-212 (213)
279 TIGR00968 3a0106s01 sulfate AB 100.0 2.2E-36 4.8E-41 325.5 23.7 202 712-925 12-215 (237)
280 PRK14269 phosphate ABC transpo 100.0 2.1E-36 4.5E-41 327.9 23.6 209 711-925 13-225 (246)
281 TIGR02673 FtsE cell division A 100.0 3.8E-37 8.3E-42 326.9 17.5 204 7-256 5-214 (214)
282 PRK09493 glnQ glutamine ABC tr 100.0 8.5E-37 1.8E-41 330.0 20.5 214 7-267 5-224 (240)
283 PRK13549 xylose transporter AT 100.0 1.4E-36 3E-41 363.6 24.4 210 711-927 16-229 (506)
284 cd03234 ABCG_White The White s 100.0 1.2E-36 2.5E-41 325.6 21.2 218 6-261 6-226 (226)
285 PRK10744 pstB phosphate transp 100.0 4E-36 8.6E-41 328.3 25.8 216 686-925 12-239 (260)
286 PRK13641 cbiO cobalt transport 100.0 3.8E-37 8.3E-42 340.3 17.8 218 6-267 5-233 (287)
287 cd03264 ABC_drug_resistance_li 100.0 6.6E-37 1.4E-41 324.2 18.9 197 19-261 13-211 (211)
288 PRK11144 modC molybdate transp 100.0 1.7E-36 3.6E-41 343.4 23.3 190 718-925 16-213 (352)
289 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.2E-36 2.6E-41 327.8 21.1 215 7-268 5-221 (236)
290 PRK14235 phosphate transporter 100.0 4.8E-36 1E-40 328.4 26.2 220 687-925 19-246 (267)
291 COG4988 CydD ABC-type transpor 100.0 5E-37 1.1E-41 346.4 18.8 214 684-926 317-539 (559)
292 cd03292 ABC_FtsE_transporter F 100.0 4E-37 8.6E-42 326.9 17.0 204 8-257 5-214 (214)
293 KOG0057 Mitochondrial Fe/S clu 100.0 4.8E-37 1E-41 340.0 18.2 212 684-925 348-569 (591)
294 PRK13547 hmuV hemin importer A 100.0 1.6E-36 3.4E-41 331.4 22.1 209 711-926 12-240 (272)
295 PRK13632 cbiO cobalt transport 100.0 3.1E-36 6.8E-41 330.7 24.6 201 712-925 21-226 (271)
296 PRK11308 dppF dipeptide transp 100.0 7.1E-37 1.5E-41 342.0 19.7 207 19-267 28-243 (327)
297 cd03299 ABC_ModC_like Archeal 100.0 3.1E-36 6.8E-41 323.9 23.9 199 715-925 14-214 (235)
298 COG4598 HisP ABC-type histidin 100.0 4.1E-37 8.8E-42 291.7 14.8 213 703-926 9-237 (256)
299 TIGR02211 LolD_lipo_ex lipopro 100.0 6E-37 1.3E-41 327.1 18.1 208 7-258 5-220 (221)
300 PRK10895 lipopolysaccharide AB 100.0 4.9E-37 1.1E-41 332.1 17.6 216 6-267 6-225 (241)
301 PRK11248 tauB taurine transpor 100.0 7.4E-37 1.6E-41 331.9 19.0 210 7-264 5-216 (255)
302 PRK14250 phosphate ABC transpo 100.0 1.5E-36 3.1E-41 327.8 21.1 197 712-925 15-216 (241)
303 PRK13635 cbiO cobalt transport 100.0 8.1E-37 1.8E-41 335.9 19.5 217 6-267 8-228 (279)
304 KOG0055 Multidrug/pheromone ex 100.0 2.5E-37 5.5E-42 374.5 16.9 221 6-268 990-1213(1228)
305 PRK11144 modC molybdate transp 100.0 1E-36 2.2E-41 345.2 20.6 195 24-267 16-217 (352)
306 cd03213 ABCG_EPDR ABCG transpo 100.0 4.2E-36 9E-41 312.5 23.6 171 713-923 22-194 (194)
307 PRK14237 phosphate transporter 100.0 8.2E-36 1.8E-40 326.6 27.1 220 686-925 19-246 (267)
308 PRK14259 phosphate ABC transpo 100.0 4.9E-36 1.1E-40 328.5 24.9 218 687-925 13-248 (269)
309 PRK15093 antimicrobial peptide 100.0 3.7E-36 8E-41 337.9 24.4 210 712-925 19-243 (330)
310 PRK13640 cbiO cobalt transport 100.0 4.1E-36 8.8E-41 331.2 24.3 200 713-925 20-227 (282)
311 COG4152 ABC-type uncharacteriz 100.0 5.2E-37 1.1E-41 306.3 15.4 216 7-270 6-221 (300)
312 PRK00635 excinuclease ABC subu 100.0 3.9E-35 8.5E-40 374.2 36.7 135 784-926 759-902 (1809)
313 cd03233 ABC_PDR_domain1 The pl 100.0 1.2E-36 2.7E-41 318.6 19.1 194 6-261 6-202 (202)
314 PRK13645 cbiO cobalt transport 100.0 2.5E-36 5.5E-41 334.6 22.5 200 714-925 25-235 (289)
315 PRK13648 cbiO cobalt transport 100.0 6.2E-36 1.3E-40 328.2 25.3 201 713-926 22-227 (269)
316 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-36 2.9E-41 326.4 19.4 214 7-261 5-228 (228)
317 TIGR03410 urea_trans_UrtE urea 100.0 9.4E-37 2E-41 327.6 18.2 211 7-266 4-219 (230)
318 PRK11247 ssuB aliphatic sulfon 100.0 1.6E-36 3.4E-41 328.5 20.1 204 7-264 16-219 (257)
319 PRK13633 cobalt transporter AT 100.0 3E-36 6.4E-41 332.2 22.5 200 713-925 23-228 (280)
320 PRK14256 phosphate ABC transpo 100.0 5.7E-36 1.2E-40 325.9 24.4 208 712-925 16-231 (252)
321 PRK15112 antimicrobial peptide 100.0 3.3E-36 7.2E-41 329.7 22.6 202 713-925 26-234 (267)
322 cd03225 ABC_cobalt_CbiO_domain 100.0 1.1E-36 2.4E-41 322.7 17.7 205 7-256 3-211 (211)
323 TIGR02769 nickel_nikE nickel i 100.0 1.6E-36 3.6E-41 332.0 19.6 208 18-267 23-239 (265)
324 PRK13636 cbiO cobalt transport 100.0 8.9E-37 1.9E-41 336.6 17.6 217 6-267 8-230 (283)
325 PRK11174 cysteine/glutathione 100.0 5.5E-37 1.2E-41 375.1 17.6 207 19-268 363-572 (588)
326 PRK11614 livF leucine/isoleuci 100.0 1.1E-36 2.5E-41 328.3 18.0 212 7-267 9-225 (237)
327 TIGR02770 nickel_nikD nickel i 100.0 4.3E-36 9.4E-41 321.9 22.3 201 715-925 1-210 (230)
328 COG0444 DppD ABC-type dipeptid 100.0 7.7E-36 1.7E-40 315.8 23.7 210 712-926 17-239 (316)
329 PRK14247 phosphate ABC transpo 100.0 1.6E-36 3.5E-41 330.0 19.2 223 6-267 6-233 (250)
330 PRK13652 cbiO cobalt transport 100.0 7.3E-37 1.6E-41 336.5 16.6 217 6-267 6-226 (277)
331 TIGR01184 ntrCD nitrate transp 100.0 3.4E-36 7.3E-41 322.3 21.1 202 22-266 1-202 (230)
332 PRK10771 thiQ thiamine transpo 100.0 3.9E-36 8.4E-41 322.9 21.6 196 718-925 17-214 (232)
333 PRK10619 histidine/lysine/argi 100.0 1.5E-36 3.2E-41 331.3 18.5 215 6-267 8-240 (257)
334 TIGR00972 3a0107s01c2 phosphat 100.0 3.1E-36 6.8E-41 326.9 20.9 216 7-267 5-231 (247)
335 cd03235 ABC_Metallic_Cations A 100.0 1.1E-36 2.4E-41 322.9 17.0 209 7-261 3-213 (213)
336 TIGR03005 ectoine_ehuA ectoine 100.0 1.5E-36 3.2E-41 330.5 18.4 215 7-267 4-235 (252)
337 PRK14270 phosphate ABC transpo 100.0 6.5E-36 1.4E-40 325.2 23.4 203 712-925 16-230 (251)
338 PRK14257 phosphate ABC transpo 100.0 1.3E-35 2.7E-40 331.8 26.2 221 687-925 80-308 (329)
339 PRK10762 D-ribose transporter 100.0 4.6E-36 1E-40 358.6 24.2 208 711-927 15-227 (501)
340 PRK14244 phosphate ABC transpo 100.0 7.6E-36 1.6E-40 324.7 23.7 208 712-925 17-232 (251)
341 PRK14250 phosphate ABC transpo 100.0 1.2E-36 2.5E-41 328.5 17.1 212 5-267 5-220 (241)
342 COG4604 CeuD ABC-type enteroch 100.0 2.7E-37 5.9E-42 298.2 10.7 214 704-927 5-222 (252)
343 PRK14257 phosphate ABC transpo 100.0 1.9E-36 4.2E-41 338.4 19.3 222 7-267 84-312 (329)
344 PRK13548 hmuV hemin importer A 100.0 2E-36 4.4E-41 329.7 19.0 215 7-267 6-229 (258)
345 TIGR03411 urea_trans_UrtD urea 100.0 2.2E-36 4.7E-41 327.5 19.0 220 7-266 6-229 (242)
346 PRK13633 cobalt transporter AT 100.0 1.9E-36 4.1E-41 333.8 18.9 218 6-267 7-232 (280)
347 PRK14274 phosphate ABC transpo 100.0 8.1E-36 1.8E-40 325.8 23.7 218 688-925 13-238 (259)
348 PRK13649 cbiO cobalt transport 100.0 2.1E-36 4.6E-41 334.2 19.3 217 6-267 5-233 (280)
349 PRK14239 phosphate transporter 100.0 8.4E-36 1.8E-40 324.9 23.7 207 712-925 17-231 (252)
350 TIGR02770 nickel_nikD nickel i 100.0 3.6E-36 7.8E-41 322.5 20.4 207 21-267 1-214 (230)
351 PRK10584 putative ABC transpor 100.0 2.6E-36 5.7E-41 323.7 19.3 211 6-260 9-227 (228)
352 PRK10908 cell division protein 100.0 2.7E-36 5.9E-41 322.0 19.2 206 7-258 5-216 (222)
353 TIGR02142 modC_ABC molybdenum 100.0 3.7E-36 8E-41 341.2 21.4 199 24-267 15-220 (354)
354 TIGR02982 heterocyst_DevA ABC 100.0 8.2E-36 1.8E-40 317.6 22.7 195 713-919 18-219 (220)
355 PRK13648 cbiO cobalt transport 100.0 2.9E-36 6.3E-41 330.8 19.7 216 7-267 11-230 (269)
356 PRK14260 phosphate ABC transpo 100.0 1.8E-35 3.9E-40 322.9 25.7 204 712-925 19-238 (259)
357 PRK14268 phosphate ABC transpo 100.0 2.3E-36 5.1E-41 329.7 18.5 214 7-266 16-240 (258)
358 PRK09700 D-allose transporter 100.0 5.7E-36 1.2E-40 358.9 23.6 208 711-927 16-231 (510)
359 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.2E-35 2.6E-40 316.4 23.4 199 704-923 26-224 (224)
360 PRK13543 cytochrome c biogenes 100.0 7.1E-36 1.5E-40 316.3 21.6 189 712-914 23-211 (214)
361 cd03267 ABC_NatA_like Similar 100.0 5.1E-36 1.1E-40 322.3 20.6 201 18-261 33-236 (236)
362 PRK13644 cbiO cobalt transport 100.0 3.2E-36 6.9E-41 330.6 19.3 214 7-267 5-223 (274)
363 PRK13642 cbiO cobalt transport 100.0 1.4E-35 2.9E-40 326.5 24.3 200 713-925 20-224 (277)
364 TIGR03740 galliderm_ABC gallid 100.0 7.2E-36 1.6E-40 319.0 21.5 205 8-264 5-209 (223)
365 PRK14240 phosphate transporter 100.0 1.3E-35 2.8E-40 322.8 23.9 207 712-925 15-229 (250)
366 PRK14273 phosphate ABC transpo 100.0 2.7E-36 5.8E-41 328.9 18.5 217 6-267 10-237 (254)
367 PRK14263 phosphate ABC transpo 100.0 1.3E-35 2.9E-40 323.3 23.9 207 711-925 19-240 (261)
368 TIGR00630 uvra excinuclease AB 100.0 1.7E-34 3.6E-39 355.2 36.3 123 787-925 789-920 (924)
369 PRK13638 cbiO cobalt transport 100.0 2.8E-36 6.1E-41 331.3 18.5 214 7-267 5-224 (271)
370 cd03298 ABC_ThiQ_thiamine_tran 100.0 5.1E-36 1.1E-40 317.4 19.7 195 24-261 16-211 (211)
371 PRK09984 phosphonate/organopho 100.0 3.8E-36 8.2E-41 329.0 19.2 225 7-266 8-240 (262)
372 cd03231 ABC_CcmA_heme_exporter 100.0 6.2E-36 1.3E-40 313.5 20.0 186 711-913 11-198 (201)
373 cd03262 ABC_HisP_GlnQ_permease 100.0 1.7E-36 3.6E-41 321.9 15.8 204 7-257 4-213 (213)
374 PRK14253 phosphate ABC transpo 100.0 1.4E-35 3.1E-40 322.3 23.5 208 711-925 14-228 (249)
375 TIGR01277 thiQ thiamine ABC tr 100.0 6.3E-36 1.4E-40 316.9 20.1 199 21-262 13-212 (213)
376 PRK10418 nikD nickel transport 100.0 2.3E-35 5E-40 321.1 25.1 201 713-925 16-225 (254)
377 PRK13538 cytochrome c biogenes 100.0 6.8E-36 1.5E-40 314.2 20.2 189 711-913 12-202 (204)
378 PRK13645 cbiO cobalt transport 100.0 2.1E-36 4.5E-41 335.3 17.2 218 7-267 10-239 (289)
379 TIGR01978 sufC FeS assembly AT 100.0 7.2E-36 1.6E-40 323.9 20.9 221 7-266 4-232 (243)
380 PRK13632 cbiO cobalt transport 100.0 4.4E-36 9.5E-41 329.5 19.4 216 7-267 11-230 (271)
381 PRK13639 cbiO cobalt transport 100.0 5E-36 1.1E-40 329.5 19.9 215 7-267 5-225 (275)
382 PRK11701 phnK phosphonate C-P 100.0 1.6E-35 3.5E-40 323.3 23.8 203 712-925 18-236 (258)
383 PRK15093 antimicrobial peptide 100.0 4.1E-36 8.8E-41 337.5 19.4 230 6-267 6-247 (330)
384 PRK14262 phosphate ABC transpo 100.0 2E-35 4.4E-40 321.3 24.2 207 712-925 15-229 (250)
385 PRK14272 phosphate ABC transpo 100.0 2.1E-35 4.5E-40 321.8 24.3 204 712-925 16-231 (252)
386 COG4148 ModC ABC-type molybdat 100.0 1.2E-36 2.6E-41 309.0 13.3 195 24-267 16-217 (352)
387 PRK14254 phosphate ABC transpo 100.0 4.4E-35 9.4E-40 322.9 27.0 213 687-925 39-264 (285)
388 PRK14271 phosphate ABC transpo 100.0 2E-35 4.3E-40 324.4 24.2 219 687-925 21-246 (276)
389 PRK11300 livG leucine/isoleuci 100.0 1.1E-35 2.3E-40 324.7 21.8 230 6-266 8-241 (255)
390 COG4598 HisP ABC-type histidin 100.0 2E-36 4.3E-41 287.1 13.8 217 5-267 8-240 (256)
391 PRK14267 phosphate ABC transpo 100.0 5.8E-36 1.3E-40 326.2 19.6 222 7-267 8-236 (253)
392 PRK14236 phosphate transporter 100.0 4.5E-35 9.7E-40 321.7 26.7 219 687-925 25-251 (272)
393 PRK14258 phosphate ABC transpo 100.0 3.3E-35 7.2E-40 321.0 25.5 220 688-925 8-240 (261)
394 PRK14269 phosphate ABC transpo 100.0 6.8E-36 1.5E-40 323.8 19.9 222 6-267 5-229 (246)
395 PRK14249 phosphate ABC transpo 100.0 2E-35 4.4E-40 321.3 23.7 207 712-925 16-230 (251)
396 PRK11124 artP arginine transpo 100.0 5E-36 1.1E-40 324.5 18.6 213 7-266 6-228 (242)
397 PRK14275 phosphate ABC transpo 100.0 2.1E-35 4.5E-40 326.0 23.9 215 687-925 39-265 (286)
398 PRK10575 iron-hydroxamate tran 100.0 4.6E-36 1E-40 328.5 18.4 219 6-266 14-235 (265)
399 PRK15112 antimicrobial peptide 100.0 6.3E-36 1.4E-40 327.6 19.5 207 19-267 26-238 (267)
400 COG4181 Predicted ABC-type tra 100.0 1.2E-35 2.7E-40 279.9 18.5 200 16-259 20-226 (228)
401 COG1123 ATPase components of v 100.0 4.8E-36 1E-40 340.6 19.0 210 17-267 302-518 (539)
402 TIGR01166 cbiO cobalt transpor 100.0 1.1E-35 2.5E-40 309.1 20.3 179 712-900 4-188 (190)
403 cd03230 ABC_DR_subfamily_A Thi 100.0 1.1E-35 2.4E-40 303.7 19.8 158 713-918 13-172 (173)
404 PRK14251 phosphate ABC transpo 100.0 4.4E-35 9.5E-40 318.9 25.7 207 712-925 16-230 (251)
405 PRK14256 phosphate ABC transpo 100.0 7.9E-36 1.7E-40 324.8 19.7 221 7-267 8-235 (252)
406 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-35 2.8E-40 354.8 23.5 211 688-927 12-226 (510)
407 PRK15056 manganese/iron transp 100.0 2.8E-35 6.1E-40 323.3 24.1 204 713-926 20-226 (272)
408 PRK13640 cbiO cobalt transport 100.0 4.1E-36 8.9E-41 331.2 17.4 219 7-267 9-231 (282)
409 PRK14242 phosphate transporter 100.0 6E-36 1.3E-40 326.1 18.5 220 6-266 9-235 (253)
410 PRK10247 putative ABC transpor 100.0 9.1E-36 2E-40 318.1 19.4 197 712-923 19-220 (225)
411 PRK14261 phosphate ABC transpo 100.0 3E-35 6.4E-40 320.4 23.7 207 712-925 18-232 (253)
412 cd03299 ABC_ModC_like Archeal 100.0 1.2E-35 2.6E-40 319.3 20.3 204 21-267 14-218 (235)
413 cd03300 ABC_PotA_N PotA is an 100.0 1.9E-35 4E-40 317.5 21.6 215 7-267 4-219 (232)
414 PRK14248 phosphate ABC transpo 100.0 2.4E-35 5.2E-40 323.6 22.9 218 688-925 22-247 (268)
415 PRK10771 thiQ thiamine transpo 100.0 1.4E-35 3.1E-40 318.6 20.5 202 23-267 16-218 (232)
416 TIGR02633 xylG D-xylose ABC tr 100.0 2.4E-35 5.2E-40 353.0 24.7 210 711-927 12-227 (500)
417 PRK10982 galactose/methyl gala 100.0 2E-35 4.4E-40 352.5 23.8 208 711-927 9-220 (491)
418 PRK13642 cbiO cobalt transport 100.0 7.2E-36 1.6E-40 328.6 18.3 218 6-267 7-228 (277)
419 PRK10419 nikE nickel transport 100.0 3E-35 6.5E-40 322.1 23.2 205 712-927 24-238 (268)
420 PRK03695 vitamin B12-transport 100.0 3.1E-35 6.8E-40 318.4 22.9 197 715-925 11-217 (248)
421 PRK10253 iron-enterobactin tra 100.0 1.1E-35 2.4E-40 325.5 19.6 220 6-267 10-232 (265)
422 COG1129 MglA ABC-type sugar tr 100.0 2.9E-35 6.4E-40 332.1 23.4 224 704-936 12-242 (500)
423 cd03252 ABCC_Hemolysin The ABC 100.0 8.7E-36 1.9E-40 321.7 18.4 196 713-925 15-220 (237)
424 CHL00131 ycf16 sulfate ABC tra 100.0 5E-35 1.1E-39 318.8 24.5 209 712-926 19-237 (252)
425 COG4161 ArtP ABC-type arginine 100.0 1.1E-35 2.4E-40 276.8 16.2 207 708-925 10-225 (242)
426 PRK14245 phosphate ABC transpo 100.0 1E-35 2.3E-40 323.4 18.7 220 7-267 7-233 (250)
427 PRK11288 araG L-arabinose tran 100.0 2.7E-35 5.9E-40 352.0 24.0 205 711-924 15-223 (501)
428 PRK14241 phosphate transporter 100.0 1.8E-35 4E-40 322.9 20.6 222 6-267 7-241 (258)
429 PRK14255 phosphate ABC transpo 100.0 5.6E-35 1.2E-39 318.3 24.4 207 712-925 17-231 (252)
430 PRK14235 phosphate transporter 100.0 1.3E-35 2.9E-40 325.0 19.4 221 7-267 23-250 (267)
431 COG4604 CeuD ABC-type enteroch 100.0 2E-36 4.3E-41 292.2 11.3 219 6-268 4-225 (252)
432 PRK11231 fecE iron-dicitrate t 100.0 1.3E-35 2.9E-40 323.3 19.3 218 6-266 5-225 (255)
433 PRK14274 phosphate ABC transpo 100.0 1.3E-35 2.8E-40 324.3 19.2 221 6-267 15-242 (259)
434 PRK11174 cysteine/glutathione 100.0 1.3E-35 2.7E-40 363.1 21.3 209 687-925 349-567 (588)
435 PRK14265 phosphate ABC transpo 100.0 8.1E-35 1.7E-39 319.5 25.5 218 687-925 20-253 (274)
436 PRK10744 pstB phosphate transp 100.0 1.4E-35 2.9E-40 324.0 19.2 220 7-267 17-243 (260)
437 TIGR00968 3a0106s01 sulfate AB 100.0 2.6E-35 5.6E-40 317.2 21.0 215 7-267 4-219 (237)
438 cd03297 ABC_ModC_molybdenum_tr 100.0 1.9E-35 4.1E-40 313.6 19.5 203 8-261 5-214 (214)
439 TIGR03873 F420-0_ABC_ATP propo 100.0 1.9E-35 4.1E-40 322.3 20.0 217 7-266 5-224 (256)
440 PRK14238 phosphate transporter 100.0 4.4E-35 9.6E-40 321.3 22.9 218 687-925 24-250 (271)
441 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.1E-36 1.1E-40 372.2 17.5 217 6-268 454-673 (686)
442 PRK13539 cytochrome c biogenes 100.0 2E-35 4.4E-40 311.1 19.3 187 711-914 13-199 (207)
443 cd03289 ABCC_CFTR2 The CFTR su 100.0 2E-35 4.4E-40 321.7 19.9 210 688-926 3-221 (275)
444 PRK14237 phosphate transporter 100.0 1.8E-35 3.9E-40 324.0 19.5 220 7-267 24-250 (267)
445 COG4987 CydC ABC-type transpor 100.0 3.8E-36 8.3E-41 332.8 14.1 213 6-268 339-561 (573)
446 PRK14240 phosphate transporter 100.0 1.1E-35 2.4E-40 323.4 17.6 221 6-267 6-233 (250)
447 TIGR02323 CP_lyasePhnK phospho 100.0 4.8E-35 1E-39 319.0 22.6 203 712-925 15-233 (253)
448 PRK14239 phosphate transporter 100.0 2E-35 4.4E-40 321.9 19.6 221 6-267 8-235 (252)
449 PRK10418 nikD nickel transport 100.0 2.7E-35 5.8E-40 320.5 20.4 216 6-267 7-229 (254)
450 PRK14246 phosphate ABC transpo 100.0 7.7E-35 1.7E-39 316.6 23.9 203 711-925 21-236 (257)
451 PRK14262 phosphate ABC transpo 100.0 1.2E-35 2.6E-40 323.1 17.5 221 6-267 6-233 (250)
452 PRK14244 phosphate ABC transpo 100.0 2.4E-35 5.1E-40 320.8 19.6 222 6-267 8-236 (251)
453 PRK14243 phosphate transporter 100.0 5.7E-35 1.2E-39 319.4 22.7 206 712-925 22-243 (264)
454 TIGR00958 3a01208 Conjugate Tr 100.0 6.9E-36 1.5E-40 370.4 17.4 212 6-268 481-702 (711)
455 COG4987 CydC ABC-type transpor 100.0 4E-36 8.7E-41 332.6 13.5 212 687-926 336-557 (573)
456 cd03229 ABC_Class3 This class 100.0 2.3E-35 5E-40 302.9 18.2 159 712-915 12-176 (178)
457 PRK14261 phosphate ABC transpo 100.0 1.9E-35 4E-40 322.0 18.6 221 6-267 9-236 (253)
458 cd03245 ABCC_bacteriocin_expor 100.0 1.7E-35 3.8E-40 315.6 17.8 195 713-923 17-220 (220)
459 PRK14253 phosphate ABC transpo 100.0 1.3E-35 2.9E-40 322.5 17.2 220 6-266 6-231 (249)
460 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.1E-35 4.6E-40 366.6 21.3 208 687-925 451-668 (686)
461 TIGR01189 ccmA heme ABC export 100.0 3.9E-35 8.5E-40 307.1 20.0 185 711-912 11-197 (198)
462 COG1132 MdlB ABC-type multidru 100.0 7.4E-36 1.6E-40 363.0 16.8 219 6-268 331-552 (567)
463 PRK14270 phosphate ABC transpo 100.0 4.1E-35 8.9E-40 318.9 20.8 220 7-267 8-234 (251)
464 PRK14266 phosphate ABC transpo 100.0 1.5E-34 3.3E-39 314.4 25.2 207 712-925 15-229 (250)
465 PRK11701 phnK phosphonate C-P 100.0 3.5E-35 7.5E-40 320.7 20.1 216 7-267 10-240 (258)
466 cd03251 ABCC_MsbA MsbA is an e 100.0 1.4E-35 3E-40 319.5 16.8 195 714-925 16-220 (234)
467 PRK14271 phosphate ABC transpo 100.0 4.7E-35 1E-39 321.4 20.8 220 7-267 25-250 (276)
468 PRK10419 nikE nickel transport 100.0 2.4E-35 5.1E-40 322.9 18.3 207 19-267 25-240 (268)
469 PRK11176 lipid transporter ATP 100.0 1.1E-35 2.4E-40 363.5 17.2 213 7-268 345-567 (582)
470 PRK13546 teichoic acids export 100.0 2.8E-34 6.1E-39 311.9 26.3 194 711-926 35-228 (264)
471 PRK14272 phosphate ABC transpo 100.0 4.2E-35 9E-40 319.4 19.8 217 7-267 8-235 (252)
472 PRK09580 sufC cysteine desulfu 100.0 1.2E-34 2.6E-39 315.2 23.2 208 712-925 13-230 (248)
473 PRK14249 phosphate ABC transpo 100.0 3.9E-35 8.4E-40 319.1 19.3 221 6-267 7-234 (251)
474 PRK14252 phosphate ABC transpo 100.0 3.4E-34 7.4E-39 313.9 26.8 219 687-925 16-244 (265)
475 PRK03695 vitamin B12-transport 100.0 5.5E-35 1.2E-39 316.5 20.2 200 21-266 11-220 (248)
476 PRK10790 putative multidrug tr 100.0 1.7E-35 3.6E-40 362.0 18.1 210 7-268 344-563 (592)
477 PRK14259 phosphate ABC transpo 100.0 2.4E-35 5.1E-40 323.1 17.4 218 7-267 17-252 (269)
478 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.1E-35 2.4E-40 370.9 16.8 217 7-268 481-700 (710)
479 cd03215 ABC_Carb_Monos_II This 100.0 4.7E-35 1E-39 301.7 18.4 160 715-918 15-181 (182)
480 PRK14260 phosphate ABC transpo 100.0 2.4E-35 5.3E-40 321.9 17.1 221 6-267 10-242 (259)
481 PRK14251 phosphate ABC transpo 100.0 4.6E-35 9.9E-40 318.7 19.0 221 6-267 7-234 (251)
482 PRK14264 phosphate ABC transpo 100.0 1.4E-34 3E-39 322.1 23.2 221 687-925 45-284 (305)
483 cd03254 ABCC_Glucan_exporter_l 100.0 4.1E-35 8.8E-40 314.8 18.2 197 713-925 16-221 (229)
484 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.8E-35 3.9E-40 319.4 15.6 218 7-268 4-226 (238)
485 COG1132 MdlB ABC-type multidru 100.0 3.4E-35 7.3E-40 357.2 19.6 211 686-925 327-547 (567)
486 PRK13545 tagH teichoic acids e 100.0 2.6E-34 5.6E-39 328.0 25.4 192 713-926 37-228 (549)
487 PRK13540 cytochrome c biogenes 100.0 7.2E-35 1.6E-39 305.4 19.4 183 712-911 13-197 (200)
488 cd03252 ABCC_Hemolysin The ABC 100.0 3.3E-35 7.2E-40 317.1 17.3 216 7-267 4-224 (237)
489 COG4161 ArtP ABC-type arginine 100.0 3.3E-35 7.1E-40 273.7 14.7 214 5-264 4-226 (242)
490 COG4619 ABC-type uncharacteriz 100.0 1.6E-35 3.6E-40 278.2 12.8 196 17-257 14-212 (223)
491 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.1E-35 6.7E-40 317.6 17.0 196 713-925 16-221 (238)
492 PRK13547 hmuV hemin importer A 100.0 7.1E-35 1.5E-39 318.4 19.8 221 7-266 5-242 (272)
493 PRK14275 phosphate ABC transpo 100.0 5.3E-35 1.1E-39 322.8 18.9 207 19-267 52-269 (286)
494 PRK11160 cysteine/glutathione 100.0 2.6E-35 5.7E-40 357.2 18.1 212 7-268 342-562 (574)
495 PRK14263 phosphate ABC transpo 100.0 7.3E-35 1.6E-39 317.5 19.6 217 8-267 13-244 (261)
496 TIGR02324 CP_lyasePhnL phospho 100.0 1.4E-34 2.9E-39 309.5 21.3 191 713-914 21-223 (224)
497 COG4148 ModC ABC-type molybdat 100.0 1.6E-35 3.5E-40 300.8 13.1 190 718-925 16-213 (352)
498 PRK14248 phosphate ABC transpo 100.0 1E-34 2.2E-39 318.6 20.6 220 7-267 25-251 (268)
499 PRK14255 phosphate ABC transpo 100.0 7.7E-35 1.7E-39 317.2 19.5 219 7-266 9-234 (252)
500 PRK09544 znuC high-affinity zi 100.0 1.3E-34 2.9E-39 312.9 20.9 186 712-925 16-204 (251)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-169 Score=1513.79 Aligned_cols=1008 Identities=53% Similarity=0.904 Sum_probs=922.3
Q ss_pred ccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEccccccCCCC
Q 001507 16 RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEM 95 (1065)
Q Consensus 16 ~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~~~~~~l 95 (1065)
+.+.++|+|+|+-++||+++.++||+||||||||++|+|.+.......|+|++||++.++...++.++|++|+|+|+|.+
T Consensus 125 ~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~l 204 (1391)
T KOG0065|consen 125 KKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPEL 204 (1391)
T ss_pred cccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEecccccccccee
Confidence 45578999999999999999999999999999999999998776566889999999998887788999999999999999
Q ss_pred CHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCccc
Q 001507 96 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 175 (1065)
Q Consensus 96 Tv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 175 (1065)
||||+|.|+++|++++.+++. ..+.++. ....|.+++.+||++|+||+||++.+
T Consensus 205 TVreTldFa~rck~~~~r~~~---~~R~e~~-----------------------~~~~d~~lkilGL~~~~dT~VGnd~~ 258 (1391)
T KOG0065|consen 205 TVRETLDFAARCKGPGSRYDE---VSRREKL-----------------------AAMTDYLLKILGLDHCADTLVGNDMV 258 (1391)
T ss_pred EEeehhhHHHhccCCcccccc---ccHHHHH-----------------------HHHHHHHHHHhCchhhccceeccccc
Confidence 999999999999999988872 2222221 12478999999999999999999999
Q ss_pred ccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCC
Q 001507 176 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 255 (1065)
Q Consensus 176 ~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G 255 (1065)
|++||||||||++|++++++++++++||+|+|||+.++.++++.|+.+++..+.+.++.++|++++++++||+|++|++|
T Consensus 259 RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG 338 (1391)
T KOG0065|consen 259 RGVSGGERKRVSIGEMLVGPASILFWDEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEG 338 (1391)
T ss_pred ccccCcccceeeeeeeeecCcceeeeecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeecc
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred cEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhChhhhhhHHhhcCC
Q 001507 256 QIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVP 335 (1065)
Q Consensus 256 ~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1065)
+++|+||.+++++||+++||.||+++++|||++++++..++.++|.+...+....++.++.+.|..++.++++..++..+
T Consensus 339 ~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~ 418 (1391)
T KOG0065|consen 339 YQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKP 418 (1391)
T ss_pred ceEEeccHHHHHHHHHhcCccCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcch
Confidence 99999999999999999999999999999999999998888888888777777778899999999999999999999999
Q ss_pred ccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccccchhHHH
Q 001507 336 FDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGAL 415 (1065)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~ 415 (1065)
.++.+.++.+...+.|..+.|.|++.|+.|.+.+++||..+++..+++.+++++++|++|++... .+..+...+.+++
T Consensus 419 ~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~l 496 (1391)
T KOG0065|consen 419 YDKSKKHKAALVSSKYSVPYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGAL 496 (1391)
T ss_pred hhhhhccchhhcCCceeccHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHH
Confidence 88888888888899999999999999999999999999999999999999999999999999883 4455677889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhccccccchhhHHHHHH
Q 001507 416 YFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLL 495 (1065)
Q Consensus 416 f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g~~~~~~~f~~~~l 495 (1065)
||++++.+++++.++...++++|+++|||+.++|++|++.++.++.++|..++...+|.+++||++|+.+++.+||.+++
T Consensus 497 ffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL 576 (1391)
T KOG0065|consen 497 FFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFL 576 (1391)
T ss_pred HHHHHHHHHHhHHHHHHHHhhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHHHHHHHHHhhcCCcc
Q 001507 496 LYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSW 575 (1065)
Q Consensus 496 ~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~~~~~~~ne~~~~~~ 575 (1065)
+.++.+.++.++|++++++++++.+|+.++++.++++.+++||+|+...||+||+|++|++|+.|+++++++|||++.+|
T Consensus 577 ~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~ 656 (1391)
T KOG0065|consen 577 FLFLCQFCMSGLFRFIASLSRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRW 656 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC---------------CCccchhHHhhhcCcC-----CCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 001507 576 DKKAGN---------------SNFSLGEAILRQRSLF-----PESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQ 635 (1065)
Q Consensus 576 ~~~~~~---------------~~~~~g~~~l~~~~~~-----~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~ 635 (1065)
.|.+.+ .....|..+++.+++. +...|+|+++|++++|.++|.++..+++.|.++.....
T Consensus 657 ~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~ 736 (1391)
T KOG0065|consen 657 PCSPSGPAYDNISIENKVCAATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSG 736 (1391)
T ss_pred CCCCCCCcccccccccccchhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence 987221 1345678888877776 77789999999999999999999999999999887766
Q ss_pred cccchhhhhhHhhhh-cCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEeccccccccccccccee
Q 001507 636 AVVSKKELQERDRRR-KGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQ 714 (1065)
Q Consensus 636 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1065)
.....++........ .......+..+ .. ...+..+...++.+..++++|+.|.++.+.+++..+ ++++
T Consensus 737 ~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~s---~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~q 805 (1391)
T KOG0065|consen 737 AILVFKKGKEKKKVKSAGSSSEIEKLD-----DS---SHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQ 805 (1391)
T ss_pred ceeeeccchhhhcchhccccccccccc-----cc---cccccccccCCCccccccccceEEEEeCCccccccc---cceE
Confidence 655443322211110 00000000000 00 001234556778888999999999999888877655 6789
Q ss_pred EeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHHH
Q 001507 715 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESL 794 (1065)
Q Consensus 715 il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l 794 (1065)
+|+|||+.++||.++||||+||||||||||+|+||...|.++|+|.|||.|.++..++|.+|||.|+|.+.+.+||+|.|
T Consensus 806 LL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL 885 (1391)
T KOG0065|consen 806 LLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESL 885 (1391)
T ss_pred hhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHH
Confidence 99999999999999999999999999999999999998999999999999998889999999999999999999999999
Q ss_pred HHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCC-CceeecCCCCCCCHH
Q 001507 795 LFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP-SIVFMDEPTSGLDAR 873 (1065)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p-~il~lDEPtsgLD~~ 873 (1065)
.|+|.+|+|.+.+.+++.+.||++++.++|.+++|.++|.++ +|||.+|||||+||.+|+.|| .||||||||||||+.
T Consensus 886 ~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsq 964 (1391)
T KOG0065|consen 886 RFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQ 964 (1391)
T ss_pred HHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHH
Confidence 999999999999999999999999999999999999999998 899999999999999999999 899999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCccc
Q 001507 874 AAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAA 953 (1065)
Q Consensus 874 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~npa~ 953 (1065)
++..|++.+|++++.|+||+||+|||+.++++.||++++|++||+++|+||++++++.+++||++++|. +||+..||||
T Consensus 965 aA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~-~~~~~~NPA~ 1043 (1391)
T KOG0065|consen 965 AAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGV-KCISDENPAE 1043 (1391)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCc-cCCCCCChHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999885 7988889999
Q ss_pred ceeeccCccccccccccHHHHHHhcHHHHHHHHHHHhhCCCCCC-CcCcCCCCccCCCHHHHHHHHHHHHHHHHhcChHH
Q 001507 954 WMLEVTSPVEESRLGVDFAEIYRRSNLFQRNRELVESLSKPSPS-SKKLNFSTKYSQSFANQFLACLRKQNLSYWRNPQY 1032 (1065)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~ 1032 (1065)
|+||+++...+.+.+.||++.|++|++++++++.++.++.+.+. ..+..+.++|++|+|.|++.+++|++..+||+|.|
T Consensus 1044 ~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y 1123 (1391)
T KOG0065|consen 1044 WMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDY 1123 (1391)
T ss_pred HHHhhcccccccccCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHH
Confidence 99999998888778889999999999999999999999887777 66667788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCccccccc
Q 001507 1033 TAVRFFYTVVISLMLGSICWKFGAKRFAIKVF 1064 (1065)
Q Consensus 1033 ~~~r~~~~~~~~l~~g~~~~~~~~~~~~~~~~ 1064 (1065)
+++|+++.++.||++|++||++|++..++|+.
T Consensus 1124 ~~ar~~~~i~~gl~iGf~F~~~g~~~q~lqn~ 1155 (1391)
T KOG0065|consen 1124 LMARFALTIVAGLFIGFTFWKVGHNVQGLQNA 1155 (1391)
T ss_pred HHHHHHHHHHHHHhheeeeeecCCcHHHHHHH
Confidence 99999999999999999999999999988863
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.1e-155 Score=1499.46 Aligned_cols=1048 Identities=62% Similarity=1.054 Sum_probs=881.0
Q ss_pred CccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEccccccCCC
Q 001507 15 NRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAE 94 (1065)
Q Consensus 15 ~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~~~~~~ 94 (1065)
++.++++|+|+|+.++||++++|+|||||||||||++|+|++.++...+|+|.+||+++.+...++.++||+|+|.|++.
T Consensus 174 k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~ 253 (1470)
T PLN03140 174 KKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGV 253 (1470)
T ss_pred CCccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCc
Confidence 33467899999999999999999999999999999999999977555799999999988665556789999999999999
Q ss_pred CCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcc
Q 001507 95 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 174 (1065)
Q Consensus 95 lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~ 174 (1065)
+||+|||.|++++++.+.+++...+..+.++..+..++.+.+.+++.....+.+.+..++.+++.+||++++||.||++.
T Consensus 254 lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~ 333 (1470)
T PLN03140 254 MTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEM 333 (1470)
T ss_pred CcHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCcc
Confidence 99999999999887655444332222333333233333333333333333333344568899999999999999999999
Q ss_pred cccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecC
Q 001507 175 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 254 (1065)
Q Consensus 175 ~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~ 254 (1065)
+++|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.++|+++||+.++++++||+|++|++
T Consensus 334 ~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~ 413 (1470)
T PLN03140 334 IRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE 413 (1470)
T ss_pred ccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC
Confidence 99999999999999999999999999999999999999999999999998765677788888888999999999999999
Q ss_pred CcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhChhhhhhHHhhcC
Q 001507 255 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 334 (1065)
Q Consensus 255 G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (1065)
|+++|+||.+++.+||+++||.||+++|++||++++++..+++.+|.....|....+++++.++|+.+..++...+++..
T Consensus 414 G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 493 (1470)
T PLN03140 414 GQIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSV 493 (1470)
T ss_pred ceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999998766655554444555556789999999999887776666554
Q ss_pred CccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccccchhHH
Q 001507 335 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 414 (1065)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~ 414 (1065)
+.++...++.....+.|..+.+.|+..++.|+++.++||+..++.++++.+++|+++|++||+++.+.....+...+.|+
T Consensus 494 ~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~ 573 (1470)
T PLN03140 494 PFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGA 573 (1470)
T ss_pred hhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHH
Confidence 44333333333344568888999999999999999999999999999999999999999999987654444455677899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhccccccchhhHHHHH
Q 001507 415 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 494 (1065)
Q Consensus 415 ~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g~~~~~~~f~~~~ 494 (1065)
+||++++.+++++.++..++.+||+++|||+.++|++++|+++++++++|+.++.+++|.+++|||+|+.+++.+|+.++
T Consensus 574 lff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~ 653 (1470)
T PLN03140 574 LLFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQL 653 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHHHHHHHHHhhcCCc
Q 001507 495 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 574 (1065)
Q Consensus 495 l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~~~~~~~ne~~~~~ 574 (1065)
++.++.+.++.+++++++++++++.+|+.+++++++++++++||+++.+.||+||+|++|+||+.|+++++++|||.+..
T Consensus 654 l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~ 733 (1470)
T PLN03140 654 LLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPR 733 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred cccc-CCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhh-cC
Q 001507 575 WDKK-AGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRR-KG 652 (1065)
Q Consensus 575 ~~~~-~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 652 (1065)
|.+. +.+.....|+.+++.+++.....|+|.+++++++++++|.++.++++.|..+.................... ..
T Consensus 734 ~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (1470)
T PLN03140 734 WMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSI 813 (1470)
T ss_pred ccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcccccc
Confidence 7532 223346789999999999888889999999999999999999999999987554433332211100000000 00
Q ss_pred ------cc-hh---Hhh--hhhhhc-----ccC-c-cCcccccCCcccCccceeEEEeceeEEEecccccccccccccce
Q 001507 653 ------EN-VV---IEL--REYLQR-----SSS-L-NGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRL 713 (1065)
Q Consensus 653 ------~~-~~---~~~--~~~~~~-----~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1065)
+. .. .+. +..... ... . .....+..+..+++.+.+++|+|++|.++.+.+.++.+...+++
T Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~ 893 (1470)
T PLN03140 814 PRSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRL 893 (1470)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCc
Confidence 00 00 000 000000 000 0 00011223445678889999999999998776555555445667
Q ss_pred eEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHH
Q 001507 714 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLES 793 (1065)
Q Consensus 714 ~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~ 793 (1065)
.+|+|||++++||+++||||||||||||||++|+|+.+++..+|+|.+||.+.....+++.+|||+|+|.+++.+||+|+
T Consensus 894 ~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~ 973 (1470)
T PLN03140 894 QLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRES 973 (1470)
T ss_pred eEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHH
Confidence 89999999999999999999999999999999999987666799999999887655566789999999999999999999
Q ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHH
Q 001507 794 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 873 (1065)
Q Consensus 794 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~ 873 (1065)
|.|++.+|.+...+.+++.++++++++.++|.+++|+.+|.+.+++|||||||||+||++|+.+|+||||||||+|||+.
T Consensus 974 L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~ 1053 (1470)
T PLN03140 974 LIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1053 (1470)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Confidence 99999888765555666677899999999999999999988777899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCccc
Q 001507 874 AAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAA 953 (1065)
Q Consensus 874 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~npa~ 953 (1065)
++..+++.|++++++|+|||+++|||+.++++.||++++|++||+++|+||.+++++++++||++++|.++||+++||||
T Consensus 1054 ~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd 1133 (1470)
T PLN03140 1054 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPAT 1133 (1470)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchh
Confidence 99999999999998899999999999977889999999998789999999998888899999999977767999999999
Q ss_pred ceeeccCccccccccccHHHHHHhcHHHHHHHHHHHhhCCCCCCCcCcCCCCccCCCHHHHHHHHHHHHHHHHhcChHHH
Q 001507 954 WMLEVTSPVEESRLGVDFAEIYRRSNLFQRNRELVESLSKPSPSSKKLNFSTKYSQSFANQFLACLRKQNLSYWRNPQYT 1033 (1065)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~ 1033 (1065)
|+||+++...+.....+|++.|++|+++++..+.++++..+.+...+..+..+|++++|+|+++|++|+++++||||.++
T Consensus 1134 ~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~ 1213 (1470)
T PLN03140 1134 WMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYN 1213 (1470)
T ss_pred hhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHH
Confidence 99999886555444568999999999988887777666555444444445567899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCccccc
Q 001507 1034 AVRFFYTVVISLMLGSICWKFGAKRFAIK 1062 (1065)
Q Consensus 1034 ~~r~~~~~~~~l~~g~~~~~~~~~~~~~~ 1062 (1065)
++|+++++++||++|++||+++++..++|
T Consensus 1214 ~~r~~~~i~~al~~G~~f~~~~~~~~~~~ 1242 (1470)
T PLN03140 1214 LVRFFFTLAAALMVGTIFWKVGTKRSNAN 1242 (1470)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCcchhh
Confidence 99999999999999999999998876555
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=5.4e-141 Score=1371.83 Aligned_cols=1005 Identities=33% Similarity=0.546 Sum_probs=808.9
Q ss_pred ccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCC-CCceeEEEEECCccCCCC--CCCceEEEEccccccC
Q 001507 16 RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH-HLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQV 92 (1065)
Q Consensus 16 ~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~-~~~~~G~i~~~g~~~~~~--~~~~~~~yv~Q~~~~~ 92 (1065)
..++++|+|||+.+++||+++|+||||||||||||+|+|+..+ ..+.+|+|.+||.++.+. ..++.++||+|+|.++
T Consensus 71 ~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~ 150 (1394)
T TIGR00956 71 TKTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHF 150 (1394)
T ss_pred CCcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccC
Confidence 3457899999999999999999999999999999999998742 123699999999887532 2345699999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccC
Q 001507 93 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 172 (1065)
Q Consensus 93 ~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~ 172 (1065)
+.+||+||+.|+++++.+....+... +.+ ..+..++.+++.+||++++||.||+
T Consensus 151 ~~lTV~E~l~f~~~~~~~~~~~~~~~---~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~ 204 (1394)
T TIGR00956 151 PHLTVGETLDFAARCKTPQNRPDGVS---REE-----------------------YAKHIADVYMATYGLSHTRNTKVGN 204 (1394)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCCCCC---HHH-----------------------HHHHHHHHHHHHcCcccccCceeCC
Confidence 99999999999887654221100000 000 0012256789999999999999999
Q ss_pred cccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEe
Q 001507 173 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 252 (1065)
Q Consensus 173 ~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l 252 (1065)
+.+++|||||||||+||++|+.+|+|++|||||+|||+.++.++++.|+++++..+.++|+++||+.++++++||+|++|
T Consensus 205 ~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L 284 (1394)
T TIGR00956 205 DFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVL 284 (1394)
T ss_pred CcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999999999999987556677777788889999999999999
Q ss_pred cCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhChhhhhhHHhh
Q 001507 253 SEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEEL 332 (1065)
Q Consensus 253 ~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1065)
++|+++++|+++++.+||+++||.||++.|++||+.+++++.++.. +. ..+.....+++++.+.|+.+..++...++.
T Consensus 285 ~~G~iv~~G~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~~~-~~-~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~ 362 (1394)
T TIGR00956 285 YEGYQIYFGPADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAERQI-KP-GYEKKVPRTPQEFETYWRNSPEYAQLMKEI 362 (1394)
T ss_pred eCCeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhhhc-cc-cccccCCCCHHHHHHHHHcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987654321 11 111112345788999999887766554443
Q ss_pred cCCccC---------------CCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcc
Q 001507 333 AVPFDR---------------RFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFR 397 (1065)
Q Consensus 333 ~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~ 397 (1065)
+....+ ....+.....+.+..+++.|+..+++|+++..+||+..++.++++.+++|+++|++||+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~ 442 (1394)
T TIGR00956 363 DEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYN 442 (1394)
T ss_pred HHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 321110 00001112234577889999999999999999999999999999999999999999999
Q ss_pred cCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhh
Q 001507 398 TTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVT 477 (1065)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~ 477 (1065)
.+.+. .+...+.|++|+++++..+.++..+..++.+|++++||+..++|++++|+++++++++|+.++.+++|.+++
T Consensus 443 ~~~~~---~~~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~ 519 (1394)
T TIGR00956 443 LPKNT---SDFYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIIL 519 (1394)
T ss_pred CCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 87543 244567899999999999998888888889999999999999999999999999999999999999999999
Q ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcH
Q 001507 478 YYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSP 557 (1065)
Q Consensus 478 y~l~g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp 557 (1065)
|||+|+..++.+|+.++++.++...++.++++++++++++...|+.+++++.+++++++||+++...||+||+|++|++|
T Consensus 520 Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp 599 (1394)
T TIGR00956 520 YFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNP 599 (1394)
T ss_pred EEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCcccccC---C---------------------CCCccchhHHhhhcCcCCCccchhHHHHHHHHH
Q 001507 558 LMYAQNAASVNEFLGHSWDKKA---G---------------------NSNFSLGEAILRQRSLFPESYWYWIGVGAMLGY 613 (1065)
Q Consensus 558 ~~y~~~~~~~ne~~~~~~~~~~---~---------------------~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~ 613 (1065)
+.|++++++.|||.+..+.|.. . +.+...|+++++. .+.....|.|.++++++++
T Consensus 600 ~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~ 678 (1394)
T TIGR00956 600 LAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGF 678 (1394)
T ss_pred HHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHH
Confidence 9999999999999988776631 0 0123477888874 3344456899999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccccchhh--hhh-HhhhhcCcchhHhhhhhhhcccCccCccccc-CCcc-cC--ccce
Q 001507 614 TLLFNALFTFFLSYLNPLGKQQAVVSKKE--LQE-RDRRRKGENVVIELREYLQRSSSLNGKYFKQ-KGMV-LP--FQPL 686 (1065)
Q Consensus 614 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~--~~~~ 686 (1065)
.++|.++..+++.|..+...........+ ... .......+......++..+..........+. .... .+ ....
T Consensus 679 ~v~f~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (1394)
T TIGR00956 679 TVFFFFVYILLTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGED 758 (1394)
T ss_pred HHHHHHHHHHHHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCc
Confidence 99999999999999874433211111110 000 0000000000000000000000000000000 0000 00 1123
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCcc
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYP 765 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~-~~~G~i~i~g~~ 765 (1065)
.+.|+|+++.++.. .+++.+|+|||++++|||++||||||||||||||++|+|+.+++ +.+|+|.+||++
T Consensus 759 ~l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~ 829 (1394)
T TIGR00956 759 IFHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRP 829 (1394)
T ss_pred eEEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEE
Confidence 47889988776321 23468999999999999999999999999999999999987643 467999999998
Q ss_pred CCcccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHH
Q 001507 766 KRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQR 845 (1065)
Q Consensus 766 ~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqr 845 (1065)
+.. .+++.+|||+|+|.+++.+||+|++.|++.++.+...+.+++.++++++++.++|.+++|+.++.++ .+||||||
T Consensus 830 ~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~LSgGqr 907 (1394)
T TIGR00956 830 LDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG-EGLNVEQR 907 (1394)
T ss_pred CCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-CCCCHHHh
Confidence 753 4677899999999999999999999999988876655666677889999999999999999987654 37999999
Q ss_pred HHHHHHHHHHhCCC-ceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 001507 846 KRLTIAVELVANPS-IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 924 (1065)
Q Consensus 846 qr~~ia~~l~~~p~-il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 924 (1065)
|||+||+||+.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||++++|++||+++|.|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 99999999999999999999999999888999999999999767788999999998779999999
Q ss_pred CCCchhHHHHHHHhcCCCCCCCCCCCcccceeeccCccccccccccHHHHHHhcHHHHHHHHHHHhhCCCCCCC---cCc
Q 001507 925 LGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPVEESRLGVDFAEIYRRSNLFQRNRELVESLSKPSPSS---KKL 1001 (1065)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~npa~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~ 1001 (1065)
.+++++++++||+.. |.++||+++|||||+||+++...+.....+|.+.|+.|+.++...+.++....+.... ...
T Consensus 988 ~~~~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1394)
T TIGR00956 988 LGENSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDP 1066 (1394)
T ss_pred cccccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCcccccc
Confidence 988888999999997 5458999999999999998865443334689999999988776655544432221111 111
Q ss_pred CCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCccccccc
Q 001507 1002 NFSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRFAIKVF 1064 (1065)
Q Consensus 1002 ~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~~~~~~~~~~~~~~~ 1064 (1065)
....++++|||+|+++|++|+++++||||.++++|+++++++|+++|++||++++++.++|..
T Consensus 1067 ~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~~~~i~~~ 1129 (1394)
T TIGR00956 1067 DALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTSLQGLQNQ 1129 (1394)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 112468999999999999999999999999999999999999999999999999999998864
No 4
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.6e-77 Score=718.27 Aligned_cols=777 Identities=21% Similarity=0.249 Sum_probs=418.8
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++.+++..+|+|+|+.|++|+.++|+|||||||||++++|.+++.|. +|+|.+||.++.+.. .+.+|
T Consensus 353 f~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~i 429 (1228)
T KOG0055|consen 353 FRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQI 429 (1228)
T ss_pred EEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhc
Confidence 578889999888999999999999999999999999999999999999999886 999999999987764 45789
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|.|.|+|.+|. .||+|||.|+... ...+.+.++++. ++..--...|
T Consensus 430 glV~QePvlF~-~tI~eNI~~G~~d----at~~~i~~a~k~-----------------------------ana~~fi~~l 475 (1228)
T KOG0055|consen 430 GLVSQEPVLFA-TTIRENIRYGKPD----ATREEIEEAAKA-----------------------------ANAHDFILKL 475 (1228)
T ss_pred Ceeeechhhhc-ccHHHHHhcCCCc----ccHHHHHHHHHH-----------------------------ccHHHHHHhh
Confidence 99999998665 6999999986321 111112222211 1111123457
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++.+||.||++++ +|||||||||+|||||+.+|+|||||||||+||+++...+.+.|.+..+ |+|||+ ++|..+.+
T Consensus 476 p~g~~T~vge~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTiv-VaHRLStI 551 (1228)
T KOG0055|consen 476 PDGYDTLVGERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIV-VAHRLSTI 551 (1228)
T ss_pred HHhhcccccCCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEE-Eeeehhhh
Confidence 8889999999887 5999999999999999999999999999999999999999999998753 566666 78999988
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHh--cCccchhccccCCCCCCCCCChhHHHHHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEV--TSKKDQEQYWSNPYLPYRYISPGKFAEAFH 320 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1065)
.+ +|+|++|++|+|++.|+++|+.+. ..-.++.+... ....+.. .... . .......
T Consensus 552 rn-aD~I~v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~~-~~~~-~---------~~~~~~~ 609 (1228)
T KOG0055|consen 552 RN-ADKIAVMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAEDE-EEEE-S---------LKEERSR 609 (1228)
T ss_pred hc-cCEEEEEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhcc-cccc-c---------hhhhhhh
Confidence 77 999999999999999999999851 11122222211 1110000 0000 0 0000000
Q ss_pred hChhhhhhHHhhcCCccCCCC--CccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH-------HHHH
Q 001507 321 SYHTGKNLSEELAVPFDRRFN--HPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIV-------ALIT 391 (1065)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~-------~l~~ 391 (1065)
+. .................. ............. .......+.|-++..+..+.+.+...+.+++. ++.+
T Consensus 610 s~-~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~ 687 (1228)
T KOG0055|consen 610 SL-KSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVS-EEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVF 687 (1228)
T ss_pred cc-ccccccccccCCccccccccccccccccccccc-cccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 00 000000000000000000 0000000000000 00012223344444444444444433333332 2223
Q ss_pred HHHhcccC-CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHH
Q 001507 392 MTVFFRTT-MHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIES 470 (1065)
Q Consensus 392 g~~f~~~~-~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~ 470 (1065)
+.++--.. .+.+........+..+|.++....+... +.+. ++-....+.-...+-.
T Consensus 688 s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~-----~~q~------------------~~f~~~ge~Lt~R~R~ 744 (1228)
T KOG0055|consen 688 SQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITN-----FLQH------------------YFFGIAGEKLTKRLRS 744 (1228)
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHH------------------HHHHHHHHHHHHHHHH
Confidence 32221111 0001111111112333333222111110 0000 0000000111111111
Q ss_pred HHHHhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCCh--HHHHHHHHHHHHHHHHhhccccCCCCcchh
Q 001507 471 GFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNM--IVANTFGSFAMLVVMALGGFIISRDSIPKW 548 (1065)
Q Consensus 471 ~~~~~i~y~l~g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~--~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~ 548 (1065)
..|..+.+.=+++-.+..+- .- +...++.=+++. .+...++.++..+..+..|+.+.. +
T Consensus 745 ~~F~~ll~qd~~wFD~~~ns-g~-------------l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf-----~ 805 (1228)
T KOG0055|consen 745 MMFRALLRQEVGWFDDPENS-GA-------------LSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAF-----I 805 (1228)
T ss_pred HHHHHHHcCCCcccCCCccc-hH-------------HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----H
Confidence 12222222222211111000 00 000000000000 011111111111111111111100 0
Q ss_pred hHHh-----HhhcHHHHHHHHH---------------------HHHhhcCCcccccCCCCCccchhHHhhhcCc---CCC
Q 001507 549 WIWG-----FWVSPLMYAQNAA---------------------SVNEFLGHSWDKKAGNSNFSLGEAILRQRSL---FPE 599 (1065)
Q Consensus 549 ~~w~-----~~isp~~y~~~~~---------------------~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~---~~~ 599 (1065)
..|- .-+.|+....... ..+|-...-.+ ...++..+.+.+.+.- .+.
T Consensus 806 ~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrT----V~al~~e~~~~~~y~~~l~~p~ 881 (1228)
T KOG0055|consen 806 YGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRT----VAALCAEEKFMELYKEELEKPR 881 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHhhHHHHHHHHHHHHHHHH
Confidence 0010 0112222111111 11111100000 0001111111111100 000
Q ss_pred ----ccchhHHHHHHHHHHHHH---HHHHHHHHHhcCCCCCccc-c---cchhhh------------hhHhhhhcCcchh
Q 001507 600 ----SYWYWIGVGAMLGYTLLF---NALFTFFLSYLNPLGKQQA-V---VSKKEL------------QERDRRRKGENVV 656 (1065)
Q Consensus 600 ----~~~~~~~~g~ll~~~~~~---~~l~~~~l~~~~~~~~~~~-~---~~~~~~------------~~~~~~~~~~~~~ 656 (1065)
....|.+++..+...+.| .+.++++...+........ + ...... .+..+.......+
T Consensus 882 ~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~i 961 (1228)
T KOG0055|consen 882 KSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSI 961 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Confidence 011234443333322222 2222222222211100000 0 000000 0000000000000
Q ss_pred HhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCC
Q 001507 657 IELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSG 736 (1065)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nG 736 (1065)
..+. .+.+..++. ...+...+...-.+.++|+++.++. .++.+||+|+|++|++|+.+||+||||
T Consensus 962 F~i~---dr~~~i~~~--~~~~~~~~~~~G~I~~~~V~F~YPs----------RP~~~Il~~l~l~i~~GqTvALVG~SG 1026 (1228)
T KOG0055|consen 962 FEIL---DRKPTIDPD--STSGGKLPNVKGDIEFRNVSFAYPT----------RPDVPVLNNLSLSIRAGQTVALVGPSG 1026 (1228)
T ss_pred HHHh---cCCCCCCCC--CCCCCccccceeEEEEeeeEeeCCC----------CCCchhhcCCcEEecCCCEEEEECCCC
Confidence 1111 011101000 0112122223446899999998864 356789999999999999999999999
Q ss_pred CcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHH
Q 001507 737 AGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRA 813 (1065)
Q Consensus 737 aGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~ 813 (1065)
|||||.+.+|-+... +..|.|.|||++++. ..+|+++|.|.|+|.||. -|++||+.|+. . +.+.++
T Consensus 1027 sGKSTvI~LLeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~e--- 1095 (1228)
T KOG0055|consen 1027 SGKSTVISLLERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEEE--- 1095 (1228)
T ss_pred CCHHHHHHHHHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHHH---
Confidence 999999999988765 679999999998754 567889999999999986 49999999971 1 123222
Q ss_pred HHHHHHHHc-------CCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHH
Q 001507 814 FVEEVMELV-------ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIV 886 (1065)
Q Consensus 814 ~~~~~l~~l-------~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~ 886 (1065)
+.++.+.. +|.+-.|+.+|..+ .+||||||||++|||||++||+||||||+||+||+++.+.|+++|.+.
T Consensus 1096 -Ii~Aak~ANaH~FI~sLP~GyDT~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a- 1172 (1228)
T KOG0055|consen 1096 -IIEAAKLANAHNFISSLPQGYDTRVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRA- 1172 (1228)
T ss_pred -HHHHHHHhhhHHHHhcCcCcccCccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh-
Confidence 33333333 34455677777665 479999999999999999999999999999999999999999999996
Q ss_pred hCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 887 NTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 887 ~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
..|+|.|+++|+++ ..+.+|.|.|++ +|+|++.|+-
T Consensus 1173 ~~gRT~IvIAHRLS--TIqnaD~I~Vi~-~G~VvE~GtH 1208 (1228)
T KOG0055|consen 1173 MEGRTTIVIAHRLS--TIQNADVIAVLK-NGKVVEQGTH 1208 (1228)
T ss_pred hcCCcEEEEecchh--hhhcCCEEEEEE-CCEEEecccH
Confidence 46999999999986 568899999998 5899999974
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.4e-75 Score=711.09 Aligned_cols=568 Identities=24% Similarity=0.398 Sum_probs=469.9
Q ss_pred cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEccccccCCCCC
Q 001507 17 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMT 96 (1065)
Q Consensus 17 ~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lT 96 (1065)
.++++|+|+|+++++||+++|+|||||||||||++|+|+..+....+|+|.+||.++.....++.++||+|+|++++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 35779999999999999999999999999999999999987644468999999998764445678999999999999999
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcc-c
Q 001507 97 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM-L 175 (1065)
Q Consensus 97 v~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~-~ 175 (1065)
|+|||.|++.++.+..... ++.+.+++++++.+||.+++||.||+.. .
T Consensus 116 V~e~l~f~~~~~~~~~~~~-------------------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 164 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTK-------------------------------KEKRERVDEVLQALGLRKCANTRIGVPGRV 164 (617)
T ss_pred HHHHHHHHHhcCCCCCCCH-------------------------------HHHHHHHHHHHHHcCchhcCcCccCCCCCC
Confidence 9999999887653221100 0112348999999999999999999853 6
Q ss_pred ccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCC
Q 001507 176 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 255 (1065)
Q Consensus 176 ~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G 255 (1065)
++|||||||||+||++|+.+|+|++|||||+|||+.++.++++.|+++++. +.++|+++||+..+++++||++++|++|
T Consensus 165 ~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~~-g~tvi~~~hq~~~~i~~~~D~i~ll~~G 243 (617)
T TIGR00955 165 KGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQK-GKTIICTIHQPSSELFELFDKIILMAEG 243 (617)
T ss_pred CCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCHHHHHHhceEEEeeCC
Confidence 789999999999999999999999999999999999999999999999864 6777777778778999999999999999
Q ss_pred cEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhChhhhhhHHhhcCC
Q 001507 256 QIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVP 335 (1065)
Q Consensus 256 ~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1065)
+++|+|+++++.+||+++|++||++.||+||+.++.+....... .......++.+.+..+...++..+.....
T Consensus 244 ~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 316 (617)
T TIGR00955 244 RVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-------ESRERIEKICDSFAVSDIGRDMLVNTNLW 316 (617)
T ss_pred eEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-------chHHHHHHHHHHHhcchhhHHHHHHhhhh
Confidence 99999999999999999999999999999999998764321100 00011234444555444333332222111
Q ss_pred ccCC--C-CCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccccchh
Q 001507 336 FDRR--F-NHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYL 412 (1065)
Q Consensus 336 ~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~ 412 (1065)
.... . ..........+..+++.|+..+++|.++..+|++..+..++++.+++++++|++||+.+.+. .+.....
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~~ 393 (617)
T TIGR00955 317 SGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNIN 393 (617)
T ss_pred hccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHHH
Confidence 1000 0 00011122345678899999999999999999999999999999999999999999876432 2334557
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhccccccchhhHH
Q 001507 413 GALYFSMVIILFNGF-TEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFS 491 (1065)
Q Consensus 413 ~~~f~~l~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g~~~~~~~f~ 491 (1065)
|++|+.++...+.++ ..+..+..++++++||+..++|++++|++++.+.++|..++.+++|.+++|||+|+..++.+|+
T Consensus 394 g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~ 473 (617)
T TIGR00955 394 GALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFL 473 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHH
Confidence 778888777766654 4566777899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHHHHHHHHHhhc
Q 001507 492 RQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFL 571 (1065)
Q Consensus 492 ~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~~~~~~~ne~~ 571 (1065)
.++++.++...++.+++.++++++++...|..+++++.+++++++||+++...||.||+|++|++|++|++++++.|||.
T Consensus 474 ~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~ 553 (617)
T TIGR00955 474 TFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWS 553 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcc-cccCC---CCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 001507 572 GHSW-DKKAG---NSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYL 628 (1065)
Q Consensus 572 ~~~~-~~~~~---~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~ 628 (1065)
+..+ .|... ..+...|+.+++.+++... +.|.++++++++.++|.++.++++++.
T Consensus 554 ~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 554 DVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8765 33221 2234568899998887653 458999999999999999999998764
No 6
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-76 Score=730.75 Aligned_cols=766 Identities=20% Similarity=0.256 Sum_probs=413.0
Q ss_pred hhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEcccc
Q 001507 10 RIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQD 89 (1065)
Q Consensus 10 ~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~ 89 (1065)
++........+.|+|||++|++|+++||+|+.|||||+||.+|.|+++. .+|+|.++| .++||+|++
T Consensus 525 sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~---~sG~v~v~g----------siaYv~Q~p 591 (1381)
T KOG0054|consen 525 SFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPK---LSGSVAVNG----------SVAYVPQQP 591 (1381)
T ss_pred eEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccc---ccceEEEcC----------eEEEecccc
Confidence 3333333344589999999999999999999999999999999999865 499999999 599999999
Q ss_pred ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccccccc
Q 001507 90 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 169 (1065)
Q Consensus 90 ~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~ 169 (1065)
|++. .||||||.|+.... ..+|+.+.++|.+++|....|.+| .|.
T Consensus 592 WI~n-gTvreNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~Te 636 (1381)
T KOG0054|consen 592 WIQN-GTVRENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTE 636 (1381)
T ss_pred HhhC-CcHHHhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cce
Confidence 9655 69999999987654 567888999998888877766665 499
Q ss_pred ccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccE
Q 001507 170 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 249 (1065)
Q Consensus 170 vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v 249 (1065)
||++++ +|||||||||+||||+|+++||++||+|+|++|++++.+|++.+.. ..++++|+|.+|| .-+..+.+|.|
T Consensus 637 IGErGi-nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~--~~L~~KT~ILVTH-ql~~L~~ad~I 712 (1381)
T KOG0054|consen 637 IGERGI-NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIR--GLLRGKTVILVTH-QLQFLPHADQI 712 (1381)
T ss_pred ecCCcc-CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHH--hhhcCCEEEEEeC-chhhhhhCCEE
Confidence 999887 7999999999999999999999999999999999999999998763 3445677777888 55677889999
Q ss_pred EEecCCcEEEEcCcchHHH---HHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhChhhh
Q 001507 250 ILLSEGQIVYQGPRVSVLD---FFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGK 326 (1065)
Q Consensus 250 ~~l~~G~i~~~G~~~~~~~---~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (1065)
++|++|+|.+.|+.+|+.+ .|+++ ..+........ .....+......... +. +......
T Consensus 713 ivl~~G~I~~~Gty~el~~~~~~~~~l-------------~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~ 774 (1381)
T KOG0054|consen 713 IVLKDGKIVESGTYEELLKSGGDFAEL-------------AHEEESEQEEE---ASEKDLESGESSRES-ES-RSLESLS 774 (1381)
T ss_pred EEecCCeEecccCHHHHHhcchhHHHH-------------hhccchhhccc---cccccccccccccch-hh-hhhhhhc
Confidence 9999999999999999973 22222 00000000000 000000000000000 00 0000000
Q ss_pred hhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHH-HHHHHHHHHHHHHHHHHhcccCCCCCc-
Q 001507 327 NLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIY-VFKFIQLLIVALITMTVFFRTTMHHKT- 404 (1065)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~-~~~~~~~~~~~l~~g~~f~~~~~~~~~- 404 (1065)
...+. . .... ..+......+ ......+.....+.+.......... +..+.......+.+++-||-..+....
T Consensus 775 ~~~~~-~-~~~~--~~~~~~~~~e--e~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~ 848 (1381)
T KOG0054|consen 775 SEEEK-S-KDEK--EEEDKLVQEE--ERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGE 848 (1381)
T ss_pred ccccc-c-cccc--chhhHHHHHH--HHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 00000 0 0000 0000000000 0000001111122222221111111 112222333334444444422221111
Q ss_pred --c---ccccchhHHHHHHHHHHHHH-HHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhh
Q 001507 405 --I---DDGGLYLGALYFSMVIILFN-GFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTY 478 (1065)
Q Consensus 405 --~---~~~~~~~~~~f~~l~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y 478 (1065)
. .+...+.+.+.+..+..++. ....+...... ...++ .+.-.++..+ +-+..+
T Consensus 849 ~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~-----------------l~aS~---~Lh~~ml~~I-lrapm~ 907 (1381)
T KOG0054|consen 849 DNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGG-----------------LKASR---KLHDKLLNSI-LRAPMS 907 (1381)
T ss_pred cccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHH---HHHHHHHHHH-HhCcch
Confidence 1 11222222211111111111 11111000000 00000 0111111111 111111
Q ss_pred hccc--cccchhhHHHHHHHH-----HHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHH
Q 001507 479 YVIG--YDPNVVRFSRQLLLY-----FFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIW 551 (1065)
Q Consensus 479 ~l~g--~~~~~~~f~~~~l~~-----~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w 551 (1065)
|+-. ..+-..||..++-.. +....+...+..+++.+. .++.. .+.+.++.+ | +.+
T Consensus 908 FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~---vi~~~-~P~fli~~~------------p--l~v 969 (1381)
T KOG0054|consen 908 FFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILV---VISYV-TPWFLIAII------------P--LGV 969 (1381)
T ss_pred hcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHH---HhhHH-hHHHHHHHH------------H--HHH
Confidence 1110 011123444333211 111111111111111110 00000 000000000 0 011
Q ss_pred hHhhcHHHHHHHHHHHHhhcCCc---------------ccccCCCCCccchhHHhhhcCcCCCccc------hhHHHHHH
Q 001507 552 GFWVSPLMYAQNAASVNEFLGHS---------------WDKKAGNSNFSLGEAILRQRSLFPESYW------YWIGVGAM 610 (1065)
Q Consensus 552 ~~~isp~~y~~~~~~~ne~~~~~---------------~~~~~~~~~~~~g~~~l~~~~~~~~~~~------~~~~~g~l 610 (1065)
+||.--.+|...+.-+....+.. .+.++-+.....-.......+.+...++ .|.++..=
T Consensus 970 ~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle 1049 (1381)
T KOG0054|consen 970 IYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLE 1049 (1381)
T ss_pred HHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 12211222222222222111111 1111111111111111111111222222 24333221
Q ss_pred -HHHHHHHHHHHHHHHHhcCCCCCccccc--ch-hh--------hhhHhhhhcCcchhHhhhhhh--------hcccCcc
Q 001507 611 -LGYTLLFNALFTFFLSYLNPLGKQQAVV--SK-KE--------LQERDRRRKGENVVIELREYL--------QRSSSLN 670 (1065)
Q Consensus 611 -l~~~~~~~~l~~~~l~~~~~~~~~~~~~--~~-~~--------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 670 (1065)
++..+++.+.+...+........+.... +. .. .......++....+..+.++. ......+
T Consensus 1050 ~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~p 1129 (1381)
T KOG0054|consen 1050 LLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRP 1129 (1381)
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCC
Confidence 1111111111111111111010010000 00 00 000000000000111111111 1111114
Q ss_pred CcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCC
Q 001507 671 GKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK 750 (1065)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~ 750 (1065)
++.||..| .+.|+|++.++.. +...+|||||++|+|||++||+|++|||||||.++|.+..
T Consensus 1130 p~~WP~~G--------~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~ 1190 (1381)
T KOG0054|consen 1130 PPSWPSKG--------EIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLV 1190 (1381)
T ss_pred CCCCCCCC--------eEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhc
Confidence 56787776 5778887766532 3357999999999999999999999999999999999987
Q ss_pred CCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc
Q 001507 751 TGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL 827 (1065)
Q Consensus 751 ~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~ 827 (1065)
. +.+|+|.|||.++.. ..+|++++.+||||.+|.+ |+|+||. | ..+..++.++++++..+|.+.
T Consensus 1191 e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG-TvR~NLD-------P---f~e~sD~~IW~ALe~~~Lk~~ 1257 (1381)
T KOG0054|consen 1191 E--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSG-TVRFNLD-------P---FDEYSDDEIWEALERCQLKDV 1257 (1381)
T ss_pred C--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecC-ccccccC-------c---ccccCHHHHHHHHHHhChHHH
Confidence 6 568999999998754 5678899999999999976 9999883 2 334455678999999988655
Q ss_pred ccCccc------CCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcH
Q 001507 828 SGALIG------LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSI 901 (1065)
Q Consensus 828 ~~~~~~------~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~ 901 (1065)
.....+ .+++.++|.||||.+||||||+++++||+|||+|+++|+++...|+++||+-. +++|||+++|+.+
T Consensus 1258 v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F-~dcTVltIAHRl~- 1335 (1381)
T KOG0054|consen 1258 VSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF-KDCTVLTIAHRLN- 1335 (1381)
T ss_pred HhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh-cCCeEEEEeeccc-
Confidence 432221 13457899999999999999999999999999999999999999999999954 5899999999986
Q ss_pred HHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 902 DIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 902 ~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
....+|||+||++ |+++++|+|.
T Consensus 1336 -TVmd~DrVlVld~-G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1336 -TVMDSDRVLVLDA-GRVVEFDSPA 1358 (1381)
T ss_pred -hhhhcCeEEEeeC-CeEeecCChH
Confidence 4456899999985 8999999874
No 7
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-75 Score=697.95 Aligned_cols=562 Identities=30% Similarity=0.477 Sum_probs=471.2
Q ss_pred ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEccccccCCCCCH
Q 001507 18 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 97 (1065)
Q Consensus 18 ~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv 97 (1065)
.+++|+|||+.++|||++||+||+||||||||++|+|+.......+|+|++||++......++.+|||.|+|.+++++||
T Consensus 42 ~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV 121 (613)
T KOG0061|consen 42 TKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTV 121 (613)
T ss_pred cceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccH
Confidence 57899999999999999999999999999999999999876556899999999877766778889999999999999999
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCccccc
Q 001507 98 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 177 (1065)
Q Consensus 98 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~ 177 (1065)
+|++.|++.++.+... ..++.+.+|+++++.|||.+++||+||+...|+
T Consensus 122 ~EtL~f~A~lrlp~~~-------------------------------~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rg 170 (613)
T KOG0061|consen 122 RETLRFSALLRLPSSL-------------------------------SKEEKRERVEEVISELGLEKCADTLIGNPGIRG 170 (613)
T ss_pred HHHHHHHHHhcCCCCC-------------------------------CHHHHHHHHHHHHHHcCChhhccceecCCCCCc
Confidence 9999999988754320 112234569999999999999999999988899
Q ss_pred CchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcE
Q 001507 178 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 257 (1065)
Q Consensus 178 LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i 257 (1065)
+||||||||+||..|+.||+||+|||||||||+.++.++++.|+++|+. |+++|+++|||+.+++++||++++|++|++
T Consensus 171 iSGGErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~ 249 (613)
T KOG0061|consen 171 LSGGERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEV 249 (613)
T ss_pred cccchhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcE
Confidence 9999999999999999999999999999999999999999999999987 899999999999999999999999999999
Q ss_pred EEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCcc--chhccccCCCCCCCCCChhHHHHHHHhChhhhhhHHhhcCC
Q 001507 258 VYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKK--DQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVP 335 (1065)
Q Consensus 258 ~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1065)
+|+|+++++.+||++.|++||++.||+||+.++.+.. .+.... ........+.++......+........
T Consensus 250 vy~G~~~~~~~ff~~~G~~~P~~~Npadf~l~l~s~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (613)
T KOG0061|consen 250 VYSGSPRELLEFFSSLGFPCPELENPADFLLDLLSVDSGTRELEE--------AVRIAKLINKFSQTDNLKKTLEALEKS 321 (613)
T ss_pred EEecCHHHHHHHHHhCCCCCCCcCChHHHHHHHHccCCCchhHHh--------HHHHHHHhhhccccchhhhhHHHHhhh
Confidence 9999999999999999999999999999999987642 110000 000000000000000000000000000
Q ss_pred ccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccccchhHHH
Q 001507 336 FDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGAL 415 (1065)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~ 415 (1065)
..... ........+++.|+..+.+|.+...+|++.+...+.++.+++++++|.+||+.+.+... .....++.
T Consensus 322 ~~~~~-----~~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~---~~~~~g~~ 393 (613)
T KOG0061|consen 322 LSTSK-----KVEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKG---IQNRLGLF 393 (613)
T ss_pred ccccc-----ccccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHH---HHHHHHHH
Confidence 00000 00001157899999999999999999999999999999999999999999998644332 22556777
Q ss_pred HHHHHHHHHHHHH-HHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhccccccchhhHHHHH
Q 001507 416 YFSMVIILFNGFT-EVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 494 (1065)
Q Consensus 416 f~~l~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g~~~~~~~f~~~~ 494 (1065)
|+.+.+..+..+. .+..+..+++++.||+..++|+.++|++++.++++|..++.+++|.+++|||+|+.++..+|+.++
T Consensus 394 ~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~ 473 (613)
T KOG0061|consen 394 FFILSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFL 473 (613)
T ss_pred HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHH
Confidence 7777777555544 688889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHHHHHHHHHhhcCCc
Q 001507 495 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 574 (1065)
Q Consensus 495 l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~~~~~~~ne~~~~~ 574 (1065)
++.++...++.+++.+++++.++...+.+++++..+.+++++||+++.+.||.||.|+.|+|..+|+++++..|+|.+..
T Consensus 474 l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~ 553 (613)
T KOG0061|consen 474 LIILLSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGS 553 (613)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998733
Q ss_pred ccccCC--CCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001507 575 WDKKAG--NSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLN 629 (1065)
Q Consensus 575 ~~~~~~--~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~ 629 (1065)
..|... ..+...+..+++..++... ..|.++.+++++.++|.++.++.+++..
T Consensus 554 ~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 554 SRCFLSGNLCCESTGEDVLKQLGFEDS--SFWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cccccCcCCcccccHHHHHHhcCCccc--ccchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 333222 4566778888888877554 4588999999999999999999888753
No 8
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.9e-74 Score=695.21 Aligned_cols=563 Identities=24% Similarity=0.355 Sum_probs=441.3
Q ss_pred ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEccccccCCCCCH
Q 001507 18 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 97 (1065)
Q Consensus 18 ~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv 97 (1065)
++.+|+|+|+++++||+++|+|||||||||||++|+|++.+. ..+|+|.+||+++... .++.++||+|++.+++.+||
T Consensus 80 ~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV 157 (659)
T PLN03211 80 ERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTV 157 (659)
T ss_pred CCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCH
Confidence 457999999999999999999999999999999999998763 3599999999886432 23569999999999999999
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCccccc
Q 001507 98 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 177 (1065)
Q Consensus 98 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~ 177 (1065)
+||+.|++.++..... . .++..++++++++.+||++++||.+|++..++
T Consensus 158 ~E~l~~~a~~~~~~~~-~------------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~ 206 (659)
T PLN03211 158 RETLVFCSLLRLPKSL-T------------------------------KQEKILVAESVISELGLTKCENTIIGNSFIRG 206 (659)
T ss_pred HHHHHHHHHhCCCCCC-C------------------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCC
Confidence 9999997654321100 0 00112347889999999999999999998999
Q ss_pred CchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcE
Q 001507 178 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 257 (1065)
Q Consensus 178 LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i 257 (1065)
|||||||||+||++|+.+|+|++|||||+|||+.++.++++.|+++++ .++++|+++||+..++.++||++++|++|++
T Consensus 207 LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~i 285 (659)
T PLN03211 207 ISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRC 285 (659)
T ss_pred cChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcE
Confidence 999999999999999999999999999999999999999999999876 3556666555555579999999999999999
Q ss_pred EEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhChhhhhhHHhhcC---
Q 001507 258 VYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV--- 334 (1065)
Q Consensus 258 ~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 334 (1065)
++.|+++++.+||+++||+||++.||+||+.++.+.............+ .......+.|++... .........
T Consensus 286 v~~G~~~~~~~~f~~~G~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~ 361 (659)
T PLN03211 286 LFFGKGSDAMAYFESVGFSPSFPMNPADFLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHF 361 (659)
T ss_pred EEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhh
Confidence 9999999999999999999999999999999998653221000000000 011223333322111 000000000
Q ss_pred Cc--cCC---CCCcc-ccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccc
Q 001507 335 PF--DRR---FNHPA-ALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDG 408 (1065)
Q Consensus 335 ~~--~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~ 408 (1065)
.. ... ..... ......+..+++.|+..+++|+++. +|+......++++.+++|+++|++||+.+ ..+.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~ 435 (659)
T PLN03211 362 PQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDV 435 (659)
T ss_pred hcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHH
Confidence 00 000 00000 0011123457889999999999887 78888888999999999999999999864 2234
Q ss_pred cchhHHHHHHHHHHH-HHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhccccccch
Q 001507 409 GLYLGALYFSMVIIL-FNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNV 487 (1065)
Q Consensus 409 ~~~~~~~f~~l~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g~~~~~ 487 (1065)
..+.|++||++.+.. ...+..+..+..+|++++||+..++|++++|+++++++++|+.++.+++|.+++|||+|+..++
T Consensus 436 ~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~ 515 (659)
T PLN03211 436 QDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPEL 515 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCH
Confidence 567888888876654 4556778888899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHHHHHHHH
Q 001507 488 VRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASV 567 (1065)
Q Consensus 488 ~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~~~~~~~ 567 (1065)
.+|+.++++.++...++.+++.++++++++...|+.+++++++++++|+||+++ .||+||+|++|+||++|++++++.
T Consensus 516 ~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~ 593 (659)
T PLN03211 516 GAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLIN 593 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999997 799999999999999999999999
Q ss_pred HhhcCCcc-----cccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 001507 568 NEFLGHSW-----DKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYL 628 (1065)
Q Consensus 568 ne~~~~~~-----~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~ 628 (1065)
|||.+... .|..........-.++....+. ....|.++++++++.+++.++.++.+++.
T Consensus 594 nef~~~~~~~~~~~C~~~~~~~~~~c~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 594 VQYGEGKRISSLLGCSLPHGSDRASCKFVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred HhcCCccccccccCCCCcccCCCCCCccchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99975432 2321110000000112111121 23468899999999999999998888754
No 9
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=7.1e-73 Score=728.97 Aligned_cols=201 Identities=28% Similarity=0.416 Sum_probs=178.7
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCCCH
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
+.+|+||||.|++||++||+||||||||||+++|+|..+ +.+|+|.++|+++.. ...++.+|||+|++.+++.+||
T Consensus 1952 ~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~~LTv 2029 (2272)
T TIGR01257 1952 SPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTG 2029 (2272)
T ss_pred ceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEECcchHHHHhhhEEEEeccccCCCCCCH
Confidence 579999999999999999999999999999999999877 568999999988642 2345679999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+|++.+.+.++.. ..++.++.++++++.++|.+.+|+.+ +.|||||||||+||+||+.+|+||||||||+||
T Consensus 2030 ~E~L~l~a~l~g~---~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGqKqRLslA~ALi~~P~VLLLDEPTsGL 2101 (2272)
T TIGR01257 2030 REHLYLYARLRGV---PAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGM 2101 (2272)
T ss_pred HHHHHHHHHhcCC---CHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCC
Confidence 9999988776532 23344567889999999998888765 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 871 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+.+++.+++.|++++++|+|||+|||+++ ++...|||+++|. +|++++.|++
T Consensus 2102 Dp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~-~G~i~~~Gs~ 2154 (2272)
T TIGR01257 2102 DPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMV-KGAFQCLGTI 2154 (2272)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 999999999999999878999999999987 6788899999998 5899999986
No 10
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.2e-72 Score=726.30 Aligned_cols=566 Identities=24% Similarity=0.397 Sum_probs=468.9
Q ss_pred ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEccccccCCCCCH
Q 001507 18 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 97 (1065)
Q Consensus 18 ~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv 97 (1065)
++.+|+|||+.++||++++|+|||||||||||++|+|+..+ ...+|+|.+||.+......++.+|||+|+|.+++.+||
T Consensus 892 ~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~-g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV 970 (1470)
T PLN03140 892 RLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTV 970 (1470)
T ss_pred CceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCC-CcccceEEECCccCChHHhhhheEEEccccccCCCCcH
Confidence 45799999999999999999999999999999999998754 24689999999876543445679999999999999999
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCccccc
Q 001507 98 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 177 (1065)
Q Consensus 98 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~ 177 (1065)
+|||.|++.++.+... + ..+..+.++++++.+||.+++|+.+|+..+++
T Consensus 971 ~E~L~~~a~lr~~~~~-~------------------------------~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~ 1019 (1470)
T PLN03140 971 RESLIYSAFLRLPKEV-S------------------------------KEEKMMFVDEVMELVELDNLKDAIVGLPGVTG 1019 (1470)
T ss_pred HHHHHHHHHhCCCCCC-C------------------------------HHHHHHHHHHHHHHCCChhHhCCccCCCCCCC
Confidence 9999998765421110 0 00112348899999999999999999877789
Q ss_pred CchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecC-Cc
Q 001507 178 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE-GQ 256 (1065)
Q Consensus 178 LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~-G~ 256 (1065)
|||||||||+||++|+.+|+||||||||||||+.++..+++.|+++++. ++++|+++||+..++++.||++++|++ |+
T Consensus 1020 LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~-g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~ 1098 (1470)
T PLN03140 1020 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1098 (1470)
T ss_pred cCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCCHHHHHhCCEEEEEcCCCE
Confidence 9999999999999999999999999999999999999999999999764 667677666666688999999999996 89
Q ss_pred EEEEcCc----chHHHHHHhC-CC-CCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhChhhhhhHH
Q 001507 257 IVYQGPR----VSVLDFFASM-GF-SCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSE 330 (1065)
Q Consensus 257 i~~~G~~----~~~~~~f~~l-G~-~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1065)
++|+|+. +++.+||+++ |+ .||++.|||||+.++.+..... ....++.+.|+.+..++...+
T Consensus 1099 ~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~ 1166 (1470)
T PLN03140 1099 VIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKA 1166 (1470)
T ss_pred EEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHH
Confidence 9999996 6899999997 66 4999999999999987542211 012357778887776655443
Q ss_pred hhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccccc
Q 001507 331 ELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGL 410 (1065)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~ 410 (1065)
...................++..+++.|+..+++|++..+||++.+...++++.+++|+++|++||+.+.+..+.++...
T Consensus 1167 ~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~ 1246 (1470)
T PLN03140 1167 LVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTM 1246 (1470)
T ss_pred HHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHH
Confidence 33211100001111112345778899999999999999999999999999999999999999999998765544455555
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhccccccchhh
Q 001507 411 YLGALYFSMVIILFNGF-TEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVR 489 (1065)
Q Consensus 411 ~~~~~f~~l~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g~~~~~~~ 489 (1065)
..|++|+++++..+... ..++.+..+|++++||+..++|++++|+++++++++|+.++.+++|.+++|||+|+..++..
T Consensus 1247 ~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~ 1326 (1470)
T PLN03140 1247 VIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAK 1326 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHH
Confidence 67888888777666554 34566677999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHHHHHHHHHh
Q 001507 490 FSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNE 569 (1065)
Q Consensus 490 f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~~~~~~~ne 569 (1065)
|+.++++.++...+..+++.++++++++..+|..+++++..++++|+||+++...||.||+|++|++|+.|++++++.|+
T Consensus 1327 f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~ 1406 (1470)
T PLN03140 1327 FFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQ 1406 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcccccCCCC-CccchhHH-hhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 001507 570 FLGHSWDKKAGNS-NFSLGEAI-LRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNP 630 (1065)
Q Consensus 570 ~~~~~~~~~~~~~-~~~~g~~~-l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~ 630 (1065)
|.+....+.+++. +...+.++ ...+++.. .+.|.++++++++.++|.+++.+++++++.
T Consensus 1407 f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1407 YGDVEDTIKVPGGAPDPTIKWYIQDHYGYDP--DFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred hCCCCCcccCCCCCCCCcHHHHHHHhcCcCc--ccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 9887665544321 12344455 56667654 467899999999999999999999988764
No 11
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.5e-70 Score=621.12 Aligned_cols=487 Identities=25% Similarity=0.315 Sum_probs=366.0
Q ss_pred HHHhhhhcCCcc-ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC-CceeEEEEECCccCCCCC------
Q 001507 6 LRQLRIYRGNRS-KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFV------ 77 (1065)
Q Consensus 6 ~~~~~~~~~~~~-~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~-~~~~G~i~~~g~~~~~~~------ 77 (1065)
++++++.+.... ...+++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++....
T Consensus 8 V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~ 87 (539)
T COG1123 8 VENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRK 87 (539)
T ss_pred EeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHH
Confidence 355665554432 357999999999999999999999999999999999999875 346899999998764432
Q ss_pred -CCceEEEEccccc--cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHH
Q 001507 78 -PPRTSAYVSQQDW--QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVE 154 (1065)
Q Consensus 78 -~~~~~~yv~Q~~~--~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 154 (1065)
..+.|+|++|++. +-|-+||.+.|.-....++... ..+...++.
T Consensus 88 ~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~ 134 (539)
T COG1123 88 LRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAV 134 (539)
T ss_pred hccccEEEEecCchhhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHH
Confidence 2367999999974 5566899998876555443211 112234588
Q ss_pred HHHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEE
Q 001507 155 YIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVIS 234 (1065)
Q Consensus 155 ~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~ 234 (1065)
++|+.+||++.... +++++.|||||||||.||+||+.+|++|++||||++||+.++.+|++.|+++.++ .++++++
T Consensus 135 elL~~Vgl~~~~~~---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ 210 (539)
T COG1123 135 ELLEQVGLPDPERR---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLF 210 (539)
T ss_pred HHHHHcCCCChhhh---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEE
Confidence 89999999986544 5688999999999999999999999999999999999999999999999999876 4777888
Q ss_pred ecCCchHHHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhH
Q 001507 235 LLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGK 314 (1065)
Q Consensus 235 ~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (1065)
+||+...+.++||+|+||++|++++.|+++++.+- |.+ |++. .
T Consensus 211 ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~--------p~h-------------------------pYT~----~ 253 (539)
T COG1123 211 ITHDLGVVAELADRVVVMYKGEIVETGPTEEILSN--------PQH-------------------------PYTR----G 253 (539)
T ss_pred EcCCHHHHHHhcCeEEEEECCEEEEecCHHHHHhc--------cCC-------------------------cccH----H
Confidence 99999999999999999999999999999887531 110 0000 0
Q ss_pred HHHHHHhChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH
Q 001507 315 FAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTV 394 (1065)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~ 394 (1065)
+. ..
T Consensus 254 Ll---~a------------------------------------------------------------------------- 257 (539)
T COG1123 254 LL---AA------------------------------------------------------------------------- 257 (539)
T ss_pred HH---hh-------------------------------------------------------------------------
Confidence 00 00
Q ss_pred hcccCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHH
Q 001507 395 FFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWV 474 (1065)
Q Consensus 395 f~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~ 474 (1065)
.|.......
T Consensus 258 ------------------------------------------~p~~~~~~~----------------------------- 266 (539)
T COG1123 258 ------------------------------------------VPRLGDEKI----------------------------- 266 (539)
T ss_pred ------------------------------------------CCCcccccc-----------------------------
Confidence 000000000
Q ss_pred hhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHh
Q 001507 475 AVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFW 554 (1065)
Q Consensus 475 ~i~y~l~g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~ 554 (1065)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcHHHHHHHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 001507 555 VSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQ 634 (1065)
Q Consensus 555 isp~~y~~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~ 634 (1065)
.
T Consensus 267 -----------------------~-------------------------------------------------------- 267 (539)
T COG1123 267 -----------------------I-------------------------------------------------------- 267 (539)
T ss_pred -----------------------c--------------------------------------------------------
Confidence 0
Q ss_pred ccccchhhhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEeccccccccccccccee
Q 001507 635 QAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQ 714 (1065)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1065)
. .... .. .. ...-++.+|++..+.....+. ....+...
T Consensus 268 -----------------------~-------~~~~--~~-~~-------~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~ 305 (539)
T COG1123 268 -----------------------R-------LPRR--GP-LR-------AEPLLSVRNLSKRYGSRKGLF--VRERGEVK 305 (539)
T ss_pred -----------------------c-------cccc--cc-cc-------cCceeEeeeeeeeeccccccc--ccccccee
Confidence 0 0000 00 00 000122333332222111000 00023467
Q ss_pred EeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC--C---cccccceEEEEcCCC--CCCCC
Q 001507 715 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK--R---QETFARISGYCEQND--IHSPG 787 (1065)
Q Consensus 715 il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~~~v~q~~--~~~~~ 787 (1065)
+++||||.+++||++||+|+||||||||.++|+|+.+ +.+|.|.++|.+. . ....++.+-+|+||+ .+.|.
T Consensus 306 Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~--P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr 383 (539)
T COG1123 306 AVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLP--PSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPR 383 (539)
T ss_pred eeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCcc
Confidence 8999999999999999999999999999999999987 4689999999762 1 123455677888875 57899
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
+||++.+.-........ ...+.++++.++++..+|.. ..++. +.+||||||||++|||||+.+|++|++|||
T Consensus 384 ~tV~~~i~epL~~~~~~--~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp 456 (539)
T COG1123 384 MTVGDILAEPLRIHGGG--SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEP 456 (539)
T ss_pred ccHHHHHHhHHhhhccc--chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCC
Confidence 99999998765443322 24566678999999999975 34433 368999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||.||+..+..|.++|+++.++ |.|.|+||||+. .+...||||++|. .|+++..||.
T Consensus 457 ~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~-~G~iVE~G~~ 514 (539)
T COG1123 457 VSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMY-DGRIVEEGPT 514 (539)
T ss_pred ccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEE-CCeEEEeCCH
Confidence 9999999999999999999766 999999999987 4778899999998 5899999974
No 12
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.3e-70 Score=720.84 Aligned_cols=211 Identities=22% Similarity=0.299 Sum_probs=176.6
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.+.|+|+++.++. +.+++|+|+||+|+|||++||+||||||||||+++|.|..+ +.+|+|.|||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEec
Confidence 5888998887731 22469999999999999999999999999999999999877 5689999999987
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccCcccCCC
Q 001507 767 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 836 (1065)
Q Consensus 767 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 836 (1065)
.. ..+|+.++||||++.+|.+ |+||||.++. .. .++.++++++..++.+. .|+.++..
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~- 1371 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEA- 1371 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCC-
Confidence 54 5678899999999999976 9999996531 11 23446778887777543 34444432
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecC
Q 001507 837 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 916 (1065)
Q Consensus 837 ~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 916 (1065)
..+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....||+|++|+ +
T Consensus 1372 G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd-~ 1447 (1622)
T PLN03130 1372 GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLD-A 1447 (1622)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEE-C
Confidence 35799999999999999999999999999999999999999999999974 5899999999976 456799999998 5
Q ss_pred cEEEEeCCCC
Q 001507 917 GELIYAGPLG 926 (1065)
Q Consensus 917 g~~~~~g~~~ 926 (1065)
|+++..|++.
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 8999999864
No 13
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3e-70 Score=718.63 Aligned_cols=210 Identities=21% Similarity=0.288 Sum_probs=176.0
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.++|+|+++.++. +.+++|+|+|++|+|||++||+||||||||||+++|.|..+ +.+|+|.|||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 5888998887731 23469999999999999999999999999999999999877 5689999999986
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccc-------cCcccCCC
Q 001507 767 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 836 (1065)
Q Consensus 767 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~-------~~~~~~~~ 836 (1065)
.. ..+|+.++||||++.+|++ |++|||.+.. ..+ ++.++++++..++.+.. |+.++..
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1368 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG- 1368 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC-
Confidence 43 5678899999999999976 9999996421 112 33467788887775432 3444432
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecC
Q 001507 837 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 916 (1065)
Q Consensus 837 ~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 916 (1065)
..+||||||||+||||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|++|+ +
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~-~ 1444 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLS-S 1444 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEE-C
Confidence 35799999999999999999999999999999999999999999999874 5899999999975 456799999998 5
Q ss_pred cEEEEeCCC
Q 001507 917 GELIYAGPL 925 (1065)
Q Consensus 917 g~~~~~g~~ 925 (1065)
|+++..|++
T Consensus 1445 G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 GQVLEYDSP 1453 (1495)
T ss_pred CEEEEECCH
Confidence 899999986
No 14
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.9e-71 Score=661.07 Aligned_cols=513 Identities=27% Similarity=0.393 Sum_probs=446.6
Q ss_pred cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEccccccCCCCC
Q 001507 17 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMT 96 (1065)
Q Consensus 17 ~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lT 96 (1065)
.++++|+||++.++||.+|||||+|||||||||++|+||... ..++|+|++||.+.++...+|.+|||.|+|.|.+.+|
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~-G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTG-GYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCccc-ceEEeEEEECCeeCchhhhccccceeecccccCcccc
Confidence 568899999999999999999999999999999999999754 4689999999999987778899999999999999999
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccc
Q 001507 97 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 176 (1065)
Q Consensus 97 v~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 176 (1065)
|||.|.|++.+|.+.+.. ..+..+.||++++.++|++++|.+||+.+ +
T Consensus 881 VrESL~fSA~LRlp~~v~-------------------------------~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~ 928 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKEVS-------------------------------DEEKYEYVEEVIELLELKEYADALVGLPG-S 928 (1391)
T ss_pred hHHHHHHHHHHcCCCcCC-------------------------------HHHHHHHHHHHHHHhCchhhhhhhccCCC-C
Confidence 999999999887543210 11123459999999999999999999988 8
Q ss_pred cCchhhhhhHHHHHHHhcCC-eEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEec-C
Q 001507 177 GISGGQKKRLTTGELLVGPA-RVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS-E 254 (1065)
Q Consensus 177 ~LSGGqkqRv~ia~al~~~p-~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~-~ 254 (1065)
|||.+||||++||-.|+.+| .||+|||||||||+.++..|++.+|++++ .|++++|+||||+..+++.||++++|. .
T Consensus 929 GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkrG 1007 (1391)
T KOG0065|consen 929 GLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKRG 1007 (1391)
T ss_pred CCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhcC
Confidence 99999999999999999999 99999999999999999999999999997 589999999999999999999999996 5
Q ss_pred CcEEEEcCcch----HHHHHHhCC-CCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhChhhhhhH
Q 001507 255 GQIVYQGPRVS----VLDFFASMG-FSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLS 329 (1065)
Q Consensus 255 G~i~~~G~~~~----~~~~f~~lG-~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (1065)
|+++|.||..+ +.+||++.| .+||+..|||||+.++.....+.. ...++++.|+.+..++...
T Consensus 1008 GqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 1008 GQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred CeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHHH
Confidence 89999999754 567999987 899999999999999987543321 1247889999999888776
Q ss_pred HhhcCCccCCC-CCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccc
Q 001507 330 EELAVPFDRRF-NHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDG 408 (1065)
Q Consensus 330 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~ 408 (1065)
+++..-..... ...+.....++..+.+.|++.+++|++..+||++.+..++++..++.++++|..||+.+. +.++.
T Consensus 1076 e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~l 1152 (1391)
T KOG0065|consen 1076 ELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGL 1152 (1391)
T ss_pred HHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHH
Confidence 65442211111 122233345678899999999999999999999999999999999999999999999873 34455
Q ss_pred cchhHHHHHHHHHHHHHHHH-HHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhccccccch
Q 001507 409 GLYLGALYFSMVIILFNGFT-EVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNV 487 (1065)
Q Consensus 409 ~~~~~~~f~~l~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g~~~~~ 487 (1065)
++..++.|.++++....... +......++.+++||+..++|+..+|.++..++++|+.++.+++|.++.|+++|+...+
T Consensus 1153 qn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a 1232 (1391)
T KOG0065|consen 1153 QNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTA 1232 (1391)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhH
Confidence 66788888877666544443 44455567889999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHHHHHHHH
Q 001507 488 VRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASV 567 (1065)
Q Consensus 488 ~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~~~~~~~ 567 (1065)
.+++.+++..++.......++.++.+++|+...|..+.+++..++.+|+|+++++..||.||+|+||++|+.|..+++..
T Consensus 1233 ~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~ 1312 (1391)
T KOG0065|consen 1233 SKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLIS 1312 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHH
Confidence 99999988888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCccccc
Q 001507 568 NEFLGHSWDKK 578 (1065)
Q Consensus 568 ne~~~~~~~~~ 578 (1065)
..+++....|.
T Consensus 1313 ~~~~d~~v~c~ 1323 (1391)
T KOG0065|consen 1313 SQLGDVEVTCE 1323 (1391)
T ss_pred HHhCCCceeee
Confidence 99887665554
No 15
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.9e-68 Score=690.07 Aligned_cols=559 Identities=24% Similarity=0.352 Sum_probs=450.1
Q ss_pred ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEccccccCCCCCH
Q 001507 18 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 97 (1065)
Q Consensus 18 ~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv 97 (1065)
++.+|+|||++++|||+++|+|||||||||||++|+|+.++..+.+|+|.+||+++.. ..++.++||+|+|.+++.+||
T Consensus 775 ~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv 853 (1394)
T TIGR00956 775 KRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTV 853 (1394)
T ss_pred CcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCH
Confidence 4679999999999999999999999999999999999986433458999999998753 346779999999999999999
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCccccc
Q 001507 98 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 177 (1065)
Q Consensus 98 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~ 177 (1065)
+||+.|++.++.+... . ..+..++++++++.+||.+++|+.||+.+. +
T Consensus 854 ~E~L~~~a~l~~~~~~-~------------------------------~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~ 901 (1394)
T TIGR00956 854 RESLRFSAYLRQPKSV-S------------------------------KSEKMEYVEEVIKLLEMESYADAVVGVPGE-G 901 (1394)
T ss_pred HHHHHHHHHhCCCCCC-C------------------------------HHHHHHHHHHHHHHcCChhhCCCeeCCCCC-C
Confidence 9999998765532110 0 001123488999999999999999986543 7
Q ss_pred CchhhhhhHHHHHHHhcCCe-EEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCC-
Q 001507 178 ISGGQKKRLTTGELLVGPAR-VLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG- 255 (1065)
Q Consensus 178 LSGGqkqRv~ia~al~~~p~-vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G- 255 (1065)
|||||||||+||+||+.+|+ ||||||||||||+.++..+++.|+++++. +.++|+++||+...+++.||++++|++|
T Consensus 902 LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~-g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 902 LNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADH-GQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 99999999999999999996 99999999999999999999999999753 5666666666665678899999999987
Q ss_pred cEEEEcCc----chHHHHHHhCCC-CCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhChhhhhhHH
Q 001507 256 QIVYQGPR----VSVLDFFASMGF-SCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSE 330 (1065)
Q Consensus 256 ~i~~~G~~----~~~~~~f~~lG~-~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1065)
+++++|+. +++.+||++.|+ +||++.|||||+.++.+...... ...++.+.|+.+...+...+
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~ 1048 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKN 1048 (1394)
T ss_pred EEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHH
Confidence 99999997 578999999996 99999999999999876422110 01245566666554443332
Q ss_pred hhcC---CccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 001507 331 ELAV---PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDD 407 (1065)
Q Consensus 331 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~ 407 (1065)
+.+. +..............++..+++.|+..+++|.++..+|++.+...++++.+++|+++|.+||+.+.+ ..+
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~ 1125 (1394)
T TIGR00956 1049 ELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQG 1125 (1394)
T ss_pred HHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHH
Confidence 2211 1110000001111235778999999999999999999999999999999999999999999998753 234
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhcchhh-hhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhccccccc
Q 001507 408 GGLYLGALYFSMVIILFNGFTEVSMLVAKLPVL-YKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPN 486 (1065)
Q Consensus 408 ~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g~~~~ 486 (1065)
.+...+++|+.+.+..+.....++.+..++.++ +||+..++|+..+|+++++++++|+.++.+++|.+++||++|+..+
T Consensus 1126 i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~ 1205 (1394)
T TIGR00956 1126 LQNQMFAVFMATVLFNPLIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWN 1205 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCc
Confidence 456677777776655554445556666777764 8999999999999999999999999999999999999999999877
Q ss_pred hhh-------HHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHH
Q 001507 487 VVR-------FSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLM 559 (1065)
Q Consensus 487 ~~~-------f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~ 559 (1065)
+.. |+.++++.++...+..+++.++++++++..+|..+++++..++++|+||+++...||.||+|++|+||+.
T Consensus 1206 ~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~ 1285 (1394)
T TIGR00956 1206 ASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFT 1285 (1394)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHH
Confidence 654 8889998888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCcccccCC-------------------------------C---CC----ccchhHHhhhcCcCCCcc
Q 001507 560 YAQNAASVNEFLGHSWDKKAG-------------------------------N---SN----FSLGEAILRQRSLFPESY 601 (1065)
Q Consensus 560 y~~~~~~~ne~~~~~~~~~~~-------------------------------~---~~----~~~g~~~l~~~~~~~~~~ 601 (1065)
|++++++.|+|.+....|... + .| ...|+++++..++...
T Consensus 1286 y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~-- 1363 (1394)
T TIGR00956 1286 YLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYS-- 1363 (1394)
T ss_pred HHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCccc--
Confidence 999999999998876544221 0 01 3478888887776544
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhc
Q 001507 602 WYWIGVGAMLGYTLLFNALFTFFLSYL 628 (1065)
Q Consensus 602 ~~~~~~g~ll~~~~~~~~l~~~~l~~~ 628 (1065)
..|.+++++++|.+++ ++.++.+.|.
T Consensus 1364 ~~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1364 GRWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred ccccchhhhhHHHHHH-HHHHHhhheE
Confidence 3588999999998888 5555555543
No 16
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-68 Score=637.27 Aligned_cols=470 Identities=21% Similarity=0.326 Sum_probs=351.7
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCce
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRT 81 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~ 81 (1065)
++++++.++ ++.+|+||||++++|++++|+||||||||||+++|+|.++|. +.+|+|.++|.++.... .++.
T Consensus 8 ~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~ 83 (506)
T PRK13549 8 MKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAG 83 (506)
T ss_pred EeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCC
Confidence 345665553 246999999999999999999999999999999999998751 24999999998875432 1356
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
++||+|++.+++.+||+||+.++........ .+ ......+++++++.+|
T Consensus 84 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~-~~------------------------------~~~~~~~~~~~l~~~~ 132 (506)
T PRK13549 84 IAIIHQELALVKELSVLENIFLGNEITPGGI-MD------------------------------YDAMYLRAQKLLAQLK 132 (506)
T ss_pred eEEEEeccccCCCCcHHHHhhhcccccccCC-cC------------------------------HHHHHHHHHHHHHHcC
Confidence 9999999988999999999988643210000 00 0001224788899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..++.+ .+|||||||||+|||||+.+|+||||||||+|||+.++..+++.|+++++ .+++|++++|+.++
T Consensus 133 l~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~~~tvi~~tH~~~~ 205 (506)
T PRK13549 133 LDINPATPV-----GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA--HGIACIYISHKLNE 205 (506)
T ss_pred CCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCcHHH
Confidence 987766655 46999999999999999999999999999999999999999999999864 25677779999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHh
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHS 321 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1065)
+..+||++++|++|++++.|+.+++.. .+.. +
T Consensus 206 ~~~~~d~v~~l~~G~i~~~~~~~~~~~---------------~~~~-----------------------------~---- 237 (506)
T PRK13549 206 VKAISDTICVIRDGRHIGTRPAAGMTE---------------DDII-----------------------------T---- 237 (506)
T ss_pred HHHhcCEEEEEECCEEeeecccccCCH---------------HHHH-----------------------------H----
Confidence 999999999999999998886533200 0000 0
Q ss_pred ChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 001507 322 YHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMH 401 (1065)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~ 401 (1065)
+ +....
T Consensus 238 -------------------------------------------~-----------------------------~~~~~-- 243 (506)
T PRK13549 238 -------------------------------------------M-----------------------------MVGRE-- 243 (506)
T ss_pred -------------------------------------------H-----------------------------hhCcC--
Confidence 0 00000
Q ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcc
Q 001507 402 HKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVI 481 (1065)
Q Consensus 402 ~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~ 481 (1065)
.
T Consensus 244 ---~---------------------------------------------------------------------------- 244 (506)
T PRK13549 244 ---L---------------------------------------------------------------------------- 244 (506)
T ss_pred ---c----------------------------------------------------------------------------
Confidence 0
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHH
Q 001507 482 GYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYA 561 (1065)
Q Consensus 482 g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~ 561 (1065)
+.
T Consensus 245 ----------------------------------------------------------------~~-------------- 246 (506)
T PRK13549 245 ----------------------------------------------------------------TA-------------- 246 (506)
T ss_pred ----------------------------------------------------------------cc--------------
Confidence 00
Q ss_pred HHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchh
Q 001507 562 QNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKK 641 (1065)
Q Consensus 562 ~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 641 (1065)
.
T Consensus 247 ----------------------------------~--------------------------------------------- 247 (506)
T PRK13549 247 ----------------------------------L--------------------------------------------- 247 (506)
T ss_pred ----------------------------------c---------------------------------------------
Confidence 0
Q ss_pred hhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeeee
Q 001507 642 ELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTG 721 (1065)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~ 721 (1065)
.+. .. . +. + ..-+.++|+++.++. .+++.+|+|+||
T Consensus 248 -----------------~~~----~~----~--~~-~------~~~l~~~~l~~~~~~----------~~~~~vl~~vsl 283 (506)
T PRK13549 248 -----------------YPR----EP----H--TI-G------EVILEVRNLTAWDPV----------NPHIKRVDDVSF 283 (506)
T ss_pred -----------------ccc----cc----c--CC-C------CceEEEecCcccccc----------ccccccccceee
Confidence 000 00 0 00 0 001333343322100 023468999999
Q ss_pred EEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCC---CCCCCCCHHHHH
Q 001507 722 AFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESL 794 (1065)
Q Consensus 722 ~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~---~~~~~ltv~e~l 794 (1065)
+|++||++||+||||||||||+++|+|..++ +.+|+|.++|.++.. ...++.+||++|++ .+++.+||.||+
T Consensus 284 ~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l 362 (506)
T PRK13549 284 SLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNI 362 (506)
T ss_pred EEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHh
Confidence 9999999999999999999999999998652 258999999987532 12345689999985 467889999999
Q ss_pred HHHhhccCCC-C-CCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCC
Q 001507 795 LFSAWLRLPS-E-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 871 (1065)
Q Consensus 795 ~~~~~~~~~~-~-~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD 871 (1065)
.+........ . .......+.++++++.+++. +..+..+ ..|||||||||+|||+|+.+|++|||||||+|||
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD 437 (506)
T PRK13549 363 TLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGID 437 (506)
T ss_pred hhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcC
Confidence 8753211110 0 12233445688999999996 4556544 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 872 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 872 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
+.++..++++|++++++|+|||++|||++ ++.+.||++++|.+ |+++..|+..+
T Consensus 438 ~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 438 VGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred HhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 99999999999999888999999999986 57788999999984 89998887654
No 17
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.9e-68 Score=698.61 Aligned_cols=211 Identities=20% Similarity=0.235 Sum_probs=176.4
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.++|+|+++.++. +...+|+||||+|+|||++||+||||||||||+++|.|..+ +.+|+|.|||.++
T Consensus 1284 ~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEEc
Confidence 5888998887742 12369999999999999999999999999999999999877 5689999999987
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccCcccCCC
Q 001507 767 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 836 (1065)
Q Consensus 767 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 836 (1065)
.. ..+|+.++||||++.+|.+ |+||||.... ..+ ++.++++++..++.+. .|+.++..
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1418 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG- 1418 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC-
Confidence 54 5678899999999999986 9999995211 112 2346788888877543 34444432
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecC
Q 001507 837 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 916 (1065)
Q Consensus 837 ~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 916 (1065)
..+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+|+|+++ ....+|+|++|+ +
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld-~ 1494 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLD-K 1494 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEE-C
Confidence 35799999999999999999999999999999999999999999999864 5899999999975 567799999998 5
Q ss_pred cEEEEeCCCC
Q 001507 917 GELIYAGPLG 926 (1065)
Q Consensus 917 g~~~~~g~~~ 926 (1065)
|+++..|++.
T Consensus 1495 G~IvE~G~~~ 1504 (1522)
T TIGR00957 1495 GEVAEFGAPS 1504 (1522)
T ss_pred CEEEEECCHH
Confidence 8999999863
No 18
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.7e-68 Score=632.63 Aligned_cols=460 Identities=19% Similarity=0.298 Sum_probs=349.2
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCce
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRT 81 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~ 81 (1065)
++++++.++ ++++|+|+||++++|++++|+|||||||||||++|+|.+.|+ +|+|.++|.++.... .++.
T Consensus 7 ~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 7 LKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred EeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCC
Confidence 345555553 246999999999999999999999999999999999999876 999999998764321 1346
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
++|++|++.+++.+||+||+.|+..........+ ....+.+++++++.+|
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~ 130 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRID------------------------------WKKMYAEADKLLARLN 130 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccC------------------------------HHHHHHHHHHHHHHcC
Confidence 9999999988999999999988643210000000 0001224778899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..+..++ .|||||||||+|||||+.+|++|||||||+|||+.++..+++.|++++.. +++|++++|+.++
T Consensus 131 l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--~~tvii~sHd~~~ 203 (501)
T PRK10762 131 LRFSSDKLVG-----ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQ--GRGIVYISHRLKE 203 (501)
T ss_pred CCCCccCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHH
Confidence 9887766554 59999999999999999999999999999999999999999999998643 5677779999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHh
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHS 321 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1065)
+..+||+|++|++|+++..|+.+++.. ....+.
T Consensus 204 ~~~~~d~i~~l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--- 236 (501)
T PRK10762 204 IFEICDDVTVFRDGQFIAEREVADLTE--------------------------------------------DSLIEM--- 236 (501)
T ss_pred HHHhCCEEEEEeCCEEEEecCcCcCCH--------------------------------------------HHHHHH---
Confidence 999999999999999998876433200 000000
Q ss_pred ChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 001507 322 YHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMH 401 (1065)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~ 401 (1065)
++...
T Consensus 237 -------------------------------------------------------------------------~~~~~-- 241 (501)
T PRK10762 237 -------------------------------------------------------------------------MVGRK-- 241 (501)
T ss_pred -------------------------------------------------------------------------hcCCC--
Confidence 00000
Q ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcc
Q 001507 402 HKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVI 481 (1065)
Q Consensus 402 ~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~ 481 (1065)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHH
Q 001507 482 GYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYA 561 (1065)
Q Consensus 482 g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~ 561 (1065)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchh
Q 001507 562 QNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKK 641 (1065)
Q Consensus 562 ~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 641 (1065)
.. .
T Consensus 242 -------------~~--------------------------------------------------------------~-- 244 (501)
T PRK10762 242 -------------LE--------------------------------------------------------------D-- 244 (501)
T ss_pred -------------cc--------------------------------------------------------------c--
Confidence 00 0
Q ss_pred hhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeeee
Q 001507 642 ELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTG 721 (1065)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~ 721 (1065)
..+. .. . +. .+..+.++|++ +.+|+|+||
T Consensus 245 ----------------~~~~----~~----~--~~-------~~~~l~~~~l~------------------~~~l~~vsl 273 (501)
T PRK10762 245 ----------------QYPR----LD----K--AP-------GEVRLKVDNLS------------------GPGVNDVSF 273 (501)
T ss_pred ----------------cccc----cc----c--CC-------CCcEEEEeCcc------------------cCCcccceE
Confidence 0000 00 0 00 00013333332 136889999
Q ss_pred EEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCC---CCCCCCCHHHHH
Q 001507 722 AFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESL 794 (1065)
Q Consensus 722 ~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~---~~~~~ltv~e~l 794 (1065)
+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+|||+|++ .+++.+||.||+
T Consensus 274 ~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l 351 (501)
T PRK10762 274 TLRKGEILGVSGLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENM 351 (501)
T ss_pred EEcCCcEEEEecCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHh
Confidence 999999999999999999999999999876 4689999999876421 2345699999995 577889999999
Q ss_pred HHHhhccCC---CCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 795 LFSAWLRLP---SEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 795 ~~~~~~~~~---~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
.+....... .........+.++++++.+++. +..++.+ ..|||||||||+|||+|+.+|++|||||||+||
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~L 426 (501)
T PRK10762 352 SLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGV 426 (501)
T ss_pred hhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCC
Confidence 875321100 0012233345688999999994 5566544 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 871 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
|+.++..+.+.|++++++|.|||++||+++ ++...||++++|. +|+++..|+...
T Consensus 427 D~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~-~G~i~~~~~~~~ 481 (501)
T PRK10762 427 DVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMH-EGRISGEFTREQ 481 (501)
T ss_pred CHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEE-CCEEEEEecccc
Confidence 999999999999999877999999999987 5778899999998 589998887654
No 19
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-68 Score=634.86 Aligned_cols=468 Identities=19% Similarity=0.283 Sum_probs=349.4
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCce
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRT 81 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~ 81 (1065)
++++++.++ ++.+|+|+||++++||+++|+|||||||||||++|+|.+.|+ +|+|.++|.++.... .++.
T Consensus 8 ~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 8 MAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred EeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCC
Confidence 355655553 246999999999999999999999999999999999999775 999999998875432 1246
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
++||+|++.+++.+||+||+.++..... ..+... . . . ..+...+++++++.+|
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~-~----------~-~-------------~~~~~~~~~~~l~~~g 134 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTK--KVCGVN-I----------I-D-------------WREMRVRAAMMLLRVG 134 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhcccccc--cccccc-c----------c-C-------------HHHHHHHHHHHHHHcC
Confidence 9999999988999999999987532100 000000 0 0 0 0011234788999999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..++.+ .+|||||||||+|||||+.+|+||||||||+|||+.++..+++.|+++++. +++|++++|+.++
T Consensus 135 l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tiiivsHd~~~ 207 (510)
T PRK09700 135 LKVDLDEKV-----ANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE--GTAIVYISHKLAE 207 (510)
T ss_pred CCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCCHHH
Confidence 987776655 469999999999999999999999999999999999999999999998653 5677779999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHh
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHS 321 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1065)
+..+||++++|++|++++.|+++++.. .+.. +
T Consensus 208 ~~~~~d~v~~l~~G~i~~~g~~~~~~~---------------~~~~-----------------------------~---- 239 (510)
T PRK09700 208 IRRICDRYTVMKDGSSVCSGMVSDVSN---------------DDIV-----------------------------R---- 239 (510)
T ss_pred HHHhCCEEEEEECCEEeeecchhhCCH---------------HHHH-----------------------------H----
Confidence 999999999999999998886543210 0000 0
Q ss_pred ChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 001507 322 YHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMH 401 (1065)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~ 401 (1065)
. +....
T Consensus 240 ---------~---------------------------------------------------------------~~~~~-- 245 (510)
T PRK09700 240 ---------L---------------------------------------------------------------MVGRE-- 245 (510)
T ss_pred ---------H---------------------------------------------------------------hcCCC--
Confidence 0 00000
Q ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcc
Q 001507 402 HKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVI 481 (1065)
Q Consensus 402 ~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~ 481 (1065)
..
T Consensus 246 ---~~--------------------------------------------------------------------------- 247 (510)
T PRK09700 246 ---LQ--------------------------------------------------------------------------- 247 (510)
T ss_pred ---cc---------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHH
Q 001507 482 GYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYA 561 (1065)
Q Consensus 482 g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~ 561 (1065)
.
T Consensus 248 -----------------------------------------------------------~-------------------- 248 (510)
T PRK09700 248 -----------------------------------------------------------N-------------------- 248 (510)
T ss_pred -----------------------------------------------------------c--------------------
Confidence 0
Q ss_pred HHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchh
Q 001507 562 QNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKK 641 (1065)
Q Consensus 562 ~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 641 (1065)
. . . ..
T Consensus 249 -------~-----~----------------------~----------------------------------------~~- 253 (510)
T PRK09700 249 -------R-----F----------------------N----------------------------------------AM- 253 (510)
T ss_pred -------c-----c----------------------c----------------------------------------cc-
Confidence 0 0 0 00
Q ss_pred hhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeeee
Q 001507 642 ELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTG 721 (1065)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~ 721 (1065)
.+ ... . +. .+.-+.++|++.. + ..+|+|+||
T Consensus 254 -----------------~~-----~~~---~--~~-------~~~~l~~~~l~~~-------------~--~~~l~~isl 284 (510)
T PRK09700 254 -----------------KE-----NVS---N--LA-------HETVFEVRNVTSR-------------D--RKKVRDISF 284 (510)
T ss_pred -----------------cc-----ccc---c--CC-------CCcEEEEeCcccc-------------C--CCcccceeE
Confidence 00 000 0 00 0012444444321 1 137999999
Q ss_pred EEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCC---CCCCCCCCHHHHH
Q 001507 722 AFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQN---DIHSPGLTVLESL 794 (1065)
Q Consensus 722 ~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~---~~~~~~ltv~e~l 794 (1065)
+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+|||+|+ ..+++.+||+||+
T Consensus 285 ~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l 362 (510)
T PRK09700 285 SVCRGEILGFAGLVGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNM 362 (510)
T ss_pred EEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHh
Confidence 999999999999999999999999999876 468999999987532 1234568999998 4578899999999
Q ss_pred HHHhhcc---CCC--C-CCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 795 LFSAWLR---LPS--E-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 795 ~~~~~~~---~~~--~-~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
.+....+ ... . .......+.++++++.+++. +..++.+ ..|||||||||+|||+|+.+|+||||||||
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt 437 (510)
T PRK09700 363 AISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPT 437 (510)
T ss_pred ccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 8753211 000 0 01222335578899999996 6666554 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||+.++..+++.|++++++|.|||++|||++ .+...||++++|.+ |+++..++.
T Consensus 438 ~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 438 RGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 999999999999999999877999999999986 57788999999985 788888765
No 20
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-67 Score=642.89 Aligned_cols=500 Identities=20% Similarity=0.226 Sum_probs=356.0
Q ss_pred HHHhhhhcCC-ccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCC---------
Q 001507 6 LRQLRIYRGN-RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE--------- 75 (1065)
Q Consensus 6 ~~~~~~~~~~-~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~--------- 75 (1065)
++++++.++. ....++|+||||++++||+++|+|+||||||||+++|+|++.|. +|+|.++|..+..
T Consensus 15 v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 15 VENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred EeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccc
Confidence 4556665542 22357999999999999999999999999999999999999775 8999999864311
Q ss_pred -CC------C-CceEEEEcccc--ccCCCCCHHHHHHHHhhcc-CCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhc
Q 001507 76 -FV------P-PRTSAYVSQQD--WQVAEMTVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFAL 144 (1065)
Q Consensus 76 -~~------~-~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (1065)
.. . .+.++||+|++ .+++.+||+||+.++.+.. +. .
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~-~-------------------------------- 138 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGA-S-------------------------------- 138 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCC-C--------------------------------
Confidence 00 1 24699999997 5788899999999875431 10 0
Q ss_pred cCCcchhHHHHHHHHhCCcc---cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHH
Q 001507 145 GGQKTSLVVEYIMKILGLDT---CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLK 221 (1065)
Q Consensus 145 ~~~~~~~~v~~~l~~lgL~~---~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~ 221 (1065)
..+...+++++++.+||++ ..+. .+.+|||||||||+||+||+.+|+||||||||+|||+.++..+++.++
T Consensus 139 -~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~ 212 (623)
T PRK10261 139 -REEAMVEAKRMLDQVRIPEAQTILSR-----YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIK 212 (623)
T ss_pred -HHHHHHHHHHHHHHCCCCChhhHHhC-----CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHH
Confidence 0011234788899999964 2343 445799999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhcccc
Q 001507 222 HSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWS 301 (1065)
Q Consensus 222 ~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~ 301 (1065)
+++++ .+++|++++|+..++.++||+|++|++|++++.|+++++.. .|.+....+++..+
T Consensus 213 ~l~~~-~g~tvi~itHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~~~----------- 272 (623)
T PRK10261 213 VLQKE-MSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLAAV----------- 272 (623)
T ss_pred HHHHh-cCCEEEEEcCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhhcc-----------
Confidence 98754 35677789999999999999999999999999888755421 00000000000000
Q ss_pred CCCCCCCCCChhHHHHHHHhChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 001507 302 NPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKF 381 (1065)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~ 381 (1065)
+
T Consensus 273 ---------------------------------~---------------------------------------------- 273 (623)
T PRK10261 273 ---------------------------------P---------------------------------------------- 273 (623)
T ss_pred ---------------------------------C----------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHhcccCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHH
Q 001507 382 IQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWAL 461 (1065)
Q Consensus 382 ~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~ 461 (1065)
... .... +.
T Consensus 274 ---------------~~~----~~~~------------------------------------~~---------------- 282 (623)
T PRK10261 274 ---------------QLG----AMKG------------------------------------LD---------------- 282 (623)
T ss_pred ---------------ccc----cccc------------------------------------cc----------------
Confidence 000 0000 00
Q ss_pred HhhHHHHHHHHHHhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccC
Q 001507 462 SIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIIS 541 (1065)
Q Consensus 462 ~~p~~~i~~~~~~~i~y~l~g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~ 541 (1065)
.|
T Consensus 283 -~~----------------------------------------------------------------------------- 284 (623)
T PRK10261 283 -YP----------------------------------------------------------------------------- 284 (623)
T ss_pred -CC-----------------------------------------------------------------------------
Confidence 00
Q ss_pred CCCcchhhHHhHhhcHHHHHHHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHH
Q 001507 542 RDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALF 621 (1065)
Q Consensus 542 ~~~ip~~~~w~~~isp~~y~~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~ 621 (1065)
...+ .. .
T Consensus 285 -~~~~------------------------------~~--~---------------------------------------- 291 (623)
T PRK10261 285 -RRFP------------------------------LI--S---------------------------------------- 291 (623)
T ss_pred -cccc------------------------------cc--c----------------------------------------
Confidence 0000 00 0
Q ss_pred HHHHHhcCCCCCcccccchhhhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEeccc
Q 001507 622 TFFLSYLNPLGKQQAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPV 701 (1065)
Q Consensus 622 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (1065)
..... . .... .. .. . .+. ...-+..+|+++.+....
T Consensus 292 --------------~~~~~----~------~~~~--~~------~~----~-~~~-------~~~~L~~~~l~~~y~~~~ 327 (623)
T PRK10261 292 --------------LEHPA----K------QEPP--IE------QD----T-VVD-------GEPILQVRNLVTRFPLRS 327 (623)
T ss_pred --------------ccccc----c------cCcc--cc------cc----c-ccC-------CCceEEEeeeEEEEcCCC
Confidence 00000 0 0000 00 00 0 000 001256666665542100
Q ss_pred ccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceE
Q 001507 702 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARIS 775 (1065)
Q Consensus 702 ~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~ 775 (1065)
.. .......+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+
T Consensus 328 ~~--~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i 403 (623)
T PRK10261 328 GL--LNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDI 403 (623)
T ss_pred cc--ccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCe
Confidence 00 0000013579999999999999999999999999999999999876 568999999987632 1235679
Q ss_pred EEEcCCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHH
Q 001507 776 GYCEQND--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAV 852 (1065)
Q Consensus 776 ~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~ 852 (1065)
+||+|++ .+++.+||.|++.+....+. ........+++.++++.++|. +..++.+ .+|||||||||+|||
T Consensus 404 ~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~-----~~LSgGqrQRv~iAr 476 (623)
T PRK10261 404 QFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYP-----HEFSGGQRQRICIAR 476 (623)
T ss_pred EEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----ccCCHHHHHHHHHHH
Confidence 9999997 57889999999987643321 112234456788999999995 4555543 589999999999999
Q ss_pred HHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 853 ELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 853 ~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+.+|+||||||||+|||+.++..++++|++++++ |.|||++|||++ .+...+|++++|. .|++++.|+.
T Consensus 477 aL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~-~G~iv~~g~~ 548 (623)
T PRK10261 477 ALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMY-LGQIVEIGPR 548 (623)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999999999999999999765 899999999987 5778899999998 5899999875
No 21
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.4e-67 Score=627.97 Aligned_cols=464 Identities=20% Similarity=0.276 Sum_probs=346.8
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC----Cce
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRT 81 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~----~~~ 81 (1065)
++++++.+++ +.+|+|+||++++|++++|+|||||||||||++|+|.+.|+ +|+|.++|.++..... ++.
T Consensus 14 ~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 14 ARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred EEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCC
Confidence 3455555542 46999999999999999999999999999999999999776 9999999987654321 245
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
++|++|++.+++.+||+||+.|+... .. ..+..++++++.+|
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~------~~--------------------------------~~~~~~~~~l~~~~ 129 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPK------RQ--------------------------------ASMQKMKQLLAALG 129 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhccccc------ch--------------------------------HHHHHHHHHHHHcC
Confidence 89999999889999999999874210 00 01123678899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..++.+ ..|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++++. +.+|++++|+.++
T Consensus 130 l~~~~~~~~-----~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tiiivtHd~~~ 202 (510)
T PRK15439 130 CQLDLDSSA-----GSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQ--GVGIVFISHKLPE 202 (510)
T ss_pred CCccccCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHH
Confidence 987776655 469999999999999999999999999999999999999999999998653 5677789999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHh
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHS 321 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1065)
+..+||+|++|++|++++.|+++++... +... .+..
T Consensus 203 ~~~~~d~i~~l~~G~i~~~g~~~~~~~~---------------~~~~-----------------------------~~~~ 238 (510)
T PRK15439 203 IRQLADRISVMRDGTIALSGKTADLSTD---------------DIIQ-----------------------------AITP 238 (510)
T ss_pred HHHhCCEEEEEECCEEEEecChHHcCHH---------------HHHH-----------------------------HHhC
Confidence 9999999999999999998876543110 0000 0000
Q ss_pred ChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 001507 322 YHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMH 401 (1065)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~ 401 (1065)
....
T Consensus 239 ----------------------------------------------------------------------------~~~~ 242 (510)
T PRK15439 239 ----------------------------------------------------------------------------AARE 242 (510)
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0000
Q ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcc
Q 001507 402 HKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVI 481 (1065)
Q Consensus 402 ~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~ 481 (1065)
......
T Consensus 243 -~~~~~~------------------------------------------------------------------------- 248 (510)
T PRK15439 243 -KSLSAS------------------------------------------------------------------------- 248 (510)
T ss_pred -cccccc-------------------------------------------------------------------------
Confidence 000000
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHH
Q 001507 482 GYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYA 561 (1065)
Q Consensus 482 g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~ 561 (1065)
..+ +
T Consensus 249 ----------------------------------------------------------------~~~--~---------- 252 (510)
T PRK15439 249 ----------------------------------------------------------------QKL--W---------- 252 (510)
T ss_pred ----------------------------------------------------------------ccc--c----------
Confidence 000 0
Q ss_pred HHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchh
Q 001507 562 QNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKK 641 (1065)
Q Consensus 562 ~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 641 (1065)
.
T Consensus 253 --------------------------------~----------------------------------------------- 253 (510)
T PRK15439 253 --------------------------------L----------------------------------------------- 253 (510)
T ss_pred --------------------------------c-----------------------------------------------
Confidence 0
Q ss_pred hhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeeee
Q 001507 642 ELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTG 721 (1065)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~ 721 (1065)
..+. .... . +. .+.-+..+|++. .+|+|+||
T Consensus 254 ----------------~~~~----~~~~--~--~~-------~~~~l~~~~l~~------------------~~l~~isl 284 (510)
T PRK15439 254 ----------------ELPG----NRRQ--Q--AA-------GAPVLTVEDLTG------------------EGFRNISL 284 (510)
T ss_pred ----------------cccc----cccc--c--CC-------CCceEEEeCCCC------------------CCccceeE
Confidence 0000 0000 0 00 000133333320 15889999
Q ss_pred EEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCC---CCCCCCCHHHHH
Q 001507 722 AFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESL 794 (1065)
Q Consensus 722 ~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~---~~~~~ltv~e~l 794 (1065)
+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++
T Consensus 285 ~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l 362 (510)
T PRK15439 285 EVRAGEILGLAGVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNV 362 (510)
T ss_pred EEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHH
Confidence 999999999999999999999999999876 4689999999875421 1245689999984 478889999998
Q ss_pred HHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHH
Q 001507 795 LFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 873 (1065)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~ 873 (1065)
......+..........++.++++++.+++. +..+..+ ..|||||||||+|||+|+.+|+||||||||+|||+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~ 437 (510)
T PRK15439 363 CALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVS 437 (510)
T ss_pred HhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChh
Confidence 6421111110011122345678999999996 5666544 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 874 AAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 874 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
++..+.+.|++++++|.|||++|||++ .+.+.||++++|. +|+++..|.++.
T Consensus 438 ~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~-~G~i~~~~~~~~ 489 (510)
T PRK15439 438 ARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMH-QGEISGALTGAA 489 (510)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEEcccc
Confidence 999999999999878999999999987 5778899999998 589998887643
No 22
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.1e-66 Score=677.35 Aligned_cols=216 Identities=20% Similarity=0.310 Sum_probs=176.8
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-------------
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------------- 753 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~------------- 753 (1065)
.+.|+|++|.++. .+++++|+|+||+|+||+++||+||||||||||+++|.|...+.
T Consensus 1165 ~I~f~nVsF~Y~~----------~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYIS----------RPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCC----------CCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 5889999888742 12346999999999999999999999999999999999986631
Q ss_pred ---------------------------------------eeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCCHH
Q 001507 754 ---------------------------------------IIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVL 791 (1065)
Q Consensus 754 ---------------------------------------~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~ 791 (1065)
+.+|+|++||.++.. ..+++.+|||+|++.+|. .|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHH
Confidence 148999999998643 567889999999999985 6999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeec
Q 001507 792 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 864 (1065)
Q Consensus 792 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lD 864 (1065)
|||.|+. + +.+. +.++++++..++.+ -.|+.+|.. ...||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~----~-~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK----E-DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999862 1 2222 33667777766544 346666643 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEecCCcHHHHHhcCeEEEEecC---cE-EEEeCCC
Q 001507 865 EPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRG---GE-LIYAGPL 925 (1065)
Q Consensus 865 EPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g---g~-~~~~g~~ 925 (1065)
||||+||+++.+.|++.|+++. .+++|+|+|+|+++ ..+.+|+|++|+++ |+ ++..|+.
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 36899999999975 56789999999862 66 5578874
No 23
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.1e-67 Score=630.01 Aligned_cols=478 Identities=21% Similarity=0.285 Sum_probs=348.9
Q ss_pred HHHhhhhcCC-ccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCCCC-----
Q 001507 6 LRQLRIYRGN-RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV----- 77 (1065)
Q Consensus 6 ~~~~~~~~~~-~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~~~----- 77 (1065)
++++++.++. ...+.+|+|+||++++||+++|+||||||||||+++|+|.++|. .+.+|+|.++|.++....
T Consensus 8 ~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 87 (529)
T PRK15134 8 IENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLR 87 (529)
T ss_pred EeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHH
Confidence 4556665542 12357999999999999999999999999999999999999752 125899999998875431
Q ss_pred -C-CceEEEEccccc--cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHH
Q 001507 78 -P-PRTSAYVSQQDW--QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVV 153 (1065)
Q Consensus 78 -~-~~~~~yv~Q~~~--~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 153 (1065)
. ++.++|++|++. +++.+||+|++.+...... + .. ......++
T Consensus 88 ~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~-~--~~------------------------------~~~~~~~~ 134 (529)
T PRK15134 88 GVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHR-G--MR------------------------------REAARGEI 134 (529)
T ss_pred HHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhc-C--CC------------------------------HHHHHHHH
Confidence 1 246999999974 5677899999876432110 0 00 00112347
Q ss_pred HHHHHHhCCccc---ccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCE
Q 001507 154 EYIMKILGLDTC---ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGT 230 (1065)
Q Consensus 154 ~~~l~~lgL~~~---~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~ 230 (1065)
+++++.+||.+. .++. +.+|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++++. .+.
T Consensus 135 ~~~l~~~gl~~~~~~~~~~-----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~ 208 (529)
T PRK15134 135 LNCLDRVGIRQAAKRLTDY-----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE-LNM 208 (529)
T ss_pred HHHHHHCCCCChHHHHhhC-----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh-cCC
Confidence 889999999752 3444 4569999999999999999999999999999999999999999999998754 356
Q ss_pred EEEEecCCchHHHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCC
Q 001507 231 TVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYI 310 (1065)
Q Consensus 231 ~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (1065)
+|++++|+.+++..+||+|++|++|++++.|+++++... |..
T Consensus 209 tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~------------------------------ 250 (529)
T PRK15134 209 GLLFITHNLSIVRKLADRVAVMQNGRCVEQNRAATLFSA--------PTH------------------------------ 250 (529)
T ss_pred eEEEEcCcHHHHHHhcCEEEEEECCEEEEeCCHHHHhhC--------CCC------------------------------
Confidence 777799999999999999999999999999876544210 000
Q ss_pred ChhHHHHHHHhChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Q 001507 311 SPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALI 390 (1065)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~ 390 (1065)
... +.+
T Consensus 251 ---~~~------------------------------------------------~~~----------------------- 256 (529)
T PRK15134 251 ---PYT------------------------------------------------QKL----------------------- 256 (529)
T ss_pred ---HHH------------------------------------------------HHH-----------------------
Confidence 000 000
Q ss_pred HHHHhcccCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHH
Q 001507 391 TMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIES 470 (1065)
Q Consensus 391 ~g~~f~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~ 470 (1065)
+...
T Consensus 257 -----~~~~----------------------------------------------------------------------- 260 (529)
T PRK15134 257 -----LNSE----------------------------------------------------------------------- 260 (529)
T ss_pred -----HHhC-----------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhH
Q 001507 471 GFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWI 550 (1065)
Q Consensus 471 ~~~~~i~y~l~g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~ 550 (1065)
+
T Consensus 261 ---------------------------------------------------------------------------~---- 261 (529)
T PRK15134 261 ---------------------------------------------------------------------------P---- 261 (529)
T ss_pred ---------------------------------------------------------------------------c----
Confidence 0
Q ss_pred HhHhhcHHHHHHHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 001507 551 WGFWVSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNP 630 (1065)
Q Consensus 551 w~~~isp~~y~~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~ 630 (1065)
. .. .
T Consensus 262 ------------------------------~-----~~---------~-------------------------------- 265 (529)
T PRK15134 262 ------------------------------S-----GD---------P-------------------------------- 265 (529)
T ss_pred ------------------------------c-----cc---------c--------------------------------
Confidence 0 00 0
Q ss_pred CCCcccccchhhhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccc
Q 001507 631 LGKQQAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLE 710 (1065)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1065)
. ... . ... .-+.++|+++.+...... .....
T Consensus 266 ----------------------------~------~~~---~---~~~-------~~l~~~~l~~~~~~~~~~--~~~~~ 296 (529)
T PRK15134 266 ----------------------------V------PLP---E---PAS-------PLLDVEQLQVAFPIRKGI--LKRTV 296 (529)
T ss_pred ----------------------------c------ccC---C---CCC-------CcccccCcEEEeecCccc--ccccc
Confidence 0 000 0 000 002223333322100000 00000
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc------cccceEEEEcCCC--
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQND-- 782 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~-- 782 (1065)
+++.+|+|+||+|++||++||+||||||||||+++|+|..+ .+|+|+++|.++... .+++.+||++|++
T Consensus 297 ~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 373 (529)
T PRK15134 297 DHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNS 373 (529)
T ss_pred ccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchh
Confidence 13569999999999999999999999999999999999864 479999999875321 1345699999996
Q ss_pred CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCce
Q 001507 783 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 861 (1065)
Q Consensus 783 ~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il 861 (1065)
.+++.+||.||+.+....+.. ........++++++++.+++. +..+..+ ..|||||||||+|||||+.+|++|
T Consensus 374 ~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~ll 447 (529)
T PRK15134 374 SLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSLI 447 (529)
T ss_pred hcCCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCEE
Confidence 477889999999886533211 112233446688999999996 3555443 589999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 862 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 862 ~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||||+|||+.++..+++.|++++++ |+|||++||+++ .+.+.||++++|. +|+++..|+.
T Consensus 448 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~-~G~i~~~~~~ 510 (529)
T PRK15134 448 ILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLR-QGEVVEQGDC 510 (529)
T ss_pred EeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEE-CCEEEEEcCH
Confidence 999999999999999999999999865 899999999986 5777899999998 4799988874
No 24
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=6.4e-67 Score=627.67 Aligned_cols=454 Identities=21% Similarity=0.264 Sum_probs=343.0
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCc--CCCCceeEEEEECC--------------
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNG-------------- 70 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~--~~~~~~~G~i~~~g-------------- 70 (1065)
+++++.++ ++.+|+|+||++++|++++|+|||||||||||++|+|.+ .|+ +|+|.++|
T Consensus 4 ~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 4 KNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred EEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccc
Confidence 34555443 246999999999999999999999999999999999986 454 89999972
Q ss_pred ---------ccCC-------C------CCCCceEEEEccc-cccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhh
Q 001507 71 ---------HGFK-------E------FVPPRTSAYVSQQ-DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIA 127 (1065)
Q Consensus 71 ---------~~~~-------~------~~~~~~~~yv~Q~-~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 127 (1065)
.++. . ...++.++|++|+ +.+++.+||+||+.|+....+...
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~--------------- 142 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEG--------------- 142 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCH---------------
Confidence 2210 0 0113468999997 677888999999988653221100
Q ss_pred CCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCC
Q 001507 128 GIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNG 207 (1065)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsg 207 (1065)
.+.+.+++++++.+||++..+..+ ..|||||||||+|||||+.+|++|||||||+|
T Consensus 143 -------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~ 198 (520)
T TIGR03269 143 -------------------KEAVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGT 198 (520)
T ss_pred -------------------HHHHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCccc
Confidence 001234788999999987666544 46999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHH
Q 001507 208 LDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL 287 (1065)
Q Consensus 208 LD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l 287 (1065)
||+.++.++.+.|+++++.. +++|++++|+.+.+.++||+|++|++|++++.|+++++.+.+..
T Consensus 199 LD~~~~~~l~~~l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~--------------- 262 (520)
T TIGR03269 199 LDPQTAKLVHNALEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME--------------- 262 (520)
T ss_pred CCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh---------------
Confidence 99999999999999986543 56778899999999999999999999999887764332110000
Q ss_pred HHhcCccchhccccCCCCCCCCCChhHHHHHHHhChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHH
Q 001507 288 QEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQL 367 (1065)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 367 (1065)
.
T Consensus 263 ---------------------------------~---------------------------------------------- 263 (520)
T TIGR03269 263 ---------------------------------G---------------------------------------------- 263 (520)
T ss_pred ---------------------------------h----------------------------------------------
Confidence 0
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCc
Q 001507 368 LLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLH 447 (1065)
Q Consensus 368 ~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 447 (1065)
..
T Consensus 264 ------------------------------~~------------------------------------------------ 265 (520)
T TIGR03269 264 ------------------------------VS------------------------------------------------ 265 (520)
T ss_pred ------------------------------ch------------------------------------------------
Confidence 00
Q ss_pred ccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHH
Q 001507 448 FYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSF 527 (1065)
Q Consensus 448 ~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~ 527 (1065)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhccccCCCCcchhhHHhHhhcHHHHHHHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHH
Q 001507 528 AMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGV 607 (1065)
Q Consensus 528 ~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~ 607 (1065)
.+.
T Consensus 266 ----------------~~~------------------------------------------------------------- 268 (520)
T TIGR03269 266 ----------------EVE------------------------------------------------------------- 268 (520)
T ss_pred ----------------hhc-------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCcccee
Q 001507 608 GAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLS 687 (1065)
Q Consensus 608 g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 687 (1065)
. . .. . . . ...-
T Consensus 269 --------------------------~----~--------------------------~~-~--~---~-------~~~~ 279 (520)
T TIGR03269 269 --------------------------K----E--------------------------CE-V--E---V-------GEPI 279 (520)
T ss_pred --------------------------c----c--------------------------cc-c--C---C-------CCce
Confidence 0 0 00 0 0 0 0001
Q ss_pred EEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEC-Ccc-
Q 001507 688 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYIS-GYP- 765 (1065)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~-g~~- 765 (1065)
+.++|+++.+... ..+++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++ |.+
T Consensus 280 l~~~~l~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~ 349 (520)
T TIGR03269 280 IKVRNVSKRYISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEW 349 (520)
T ss_pred EEEeccEEEeccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCcc
Confidence 3445554433100 0123569999999999999999999999999999999999876 468999996 532
Q ss_pred --CCc------ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-----cccCcc
Q 001507 766 --KRQ------ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-----LSGALI 832 (1065)
Q Consensus 766 --~~~------~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-----~~~~~~ 832 (1065)
+.. ...++.+||++|++.+++.+||.||+.+...+. .......++++++++.+++.+ ..++.
T Consensus 350 ~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 424 (520)
T TIGR03269 350 VDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY- 424 (520)
T ss_pred ccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-
Confidence 111 123456999999988889999999998754321 122333456788999999965 23443
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEE
Q 001507 833 GLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELL 911 (1065)
Q Consensus 833 ~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~ 911 (1065)
+..|||||||||+|||||+.+|+||||||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.||+++
T Consensus 425 ----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~ 499 (520)
T TIGR03269 425 ----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAA 499 (520)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEE
Confidence 3589999999999999999999999999999999999999999999999764 899999999987 5778899999
Q ss_pred EEecCcEEEEeCCC
Q 001507 912 FMKRGGELIYAGPL 925 (1065)
Q Consensus 912 ~l~~gg~~~~~g~~ 925 (1065)
+|. +|+++..|++
T Consensus 500 ~l~-~G~i~~~g~~ 512 (520)
T TIGR03269 500 LMR-DGKIVKIGDP 512 (520)
T ss_pred EEE-CCEEEEECCH
Confidence 998 5799888864
No 25
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.3e-66 Score=622.61 Aligned_cols=469 Identities=20% Similarity=0.288 Sum_probs=346.6
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~~ 82 (1065)
+++++.++ ++.+|+|+||++++|++++|+|||||||||||++|+|.++|. +.+|+|.++|.++.... .++.+
T Consensus 5 ~~l~~~~~---~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (500)
T TIGR02633 5 KGIVKTFG---GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGI 80 (500)
T ss_pred EeEEEEeC---CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCE
Confidence 34554443 246999999999999999999999999999999999998651 24999999998875432 13469
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+||+|++.+++.+||+||+.++..........+ ......+++++++.+||
T Consensus 81 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l 130 (500)
T TIGR02633 81 VIIHQELTLVPELSVAENIFLGNEITLPGGRMA------------------------------YNAMYLRAKNLLRELQL 130 (500)
T ss_pred EEEeeccccCCCCcHHHHHHhhccccccccccC------------------------------HHHHHHHHHHHHHHcCC
Confidence 999999988999999999988643210000000 00012247788999999
Q ss_pred cccc-cccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 163 DTCA-DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 163 ~~~~-~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
.+.. ++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+++|++++|+.++
T Consensus 131 ~~~~~~~~~-----~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tviiitHd~~~ 203 (500)
T TIGR02633 131 DADNVTRPV-----GDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA--HGVACVYISHKLNE 203 (500)
T ss_pred CCCcccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCcHHH
Confidence 7654 3333 46999999999999999999999999999999999999999999999864 35677779999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHh
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHS 321 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1065)
+..+||+|++|++|++++.|+.++... ....+
T Consensus 204 ~~~~~d~i~~l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~---- 235 (500)
T TIGR02633 204 VKAVCDTICVIRDGQHVATKDMSTMSE--------------------------------------------DDIIT---- 235 (500)
T ss_pred HHHhCCEEEEEeCCeEeeecCcccCCH--------------------------------------------HHHHH----
Confidence 999999999999999987764321100 00000
Q ss_pred ChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 001507 322 YHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMH 401 (1065)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~ 401 (1065)
. +....
T Consensus 236 ---------~---------------------------------------------------------------~~~~~-- 241 (500)
T TIGR02633 236 ---------M---------------------------------------------------------------MVGRE-- 241 (500)
T ss_pred ---------H---------------------------------------------------------------HhCcc--
Confidence 0 00000
Q ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcc
Q 001507 402 HKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVI 481 (1065)
Q Consensus 402 ~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~ 481 (1065)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHH
Q 001507 482 GYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYA 561 (1065)
Q Consensus 482 g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~ 561 (1065)
.+.
T Consensus 242 ---------------------------------------------------------------~~~-------------- 244 (500)
T TIGR02633 242 ---------------------------------------------------------------ITS-------------- 244 (500)
T ss_pred ---------------------------------------------------------------ccc--------------
Confidence 000
Q ss_pred HHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchh
Q 001507 562 QNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKK 641 (1065)
Q Consensus 562 ~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 641 (1065)
.
T Consensus 245 ----------------------------------~--------------------------------------------- 245 (500)
T TIGR02633 245 ----------------------------------L--------------------------------------------- 245 (500)
T ss_pred ----------------------------------c---------------------------------------------
Confidence 0
Q ss_pred hhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeeee
Q 001507 642 ELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTG 721 (1065)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~ 721 (1065)
.+. .. . +. ...-+.++|+++.+. ..+++.+|+|+||
T Consensus 246 -----------------~~~----~~----~--~~-------~~~~l~~~~l~~~~~----------~~~~~~~l~~is~ 281 (500)
T TIGR02633 246 -----------------YPH----EP----H--EI-------GDVILEARNLTCWDV----------INPHRKRVDDVSF 281 (500)
T ss_pred -----------------ccc----cc----c--CC-------CCceEEEeCCccccc----------cccccccccccee
Confidence 000 00 0 00 000133344432210 0013468999999
Q ss_pred EEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCC---CCCCCCCHHHHH
Q 001507 722 AFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESL 794 (1065)
Q Consensus 722 ~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~---~~~~~ltv~e~l 794 (1065)
+|++||++||+||||||||||+++|+|..++ +.+|+|.++|+++.. ...++.+||++|+. .+++.+||+||+
T Consensus 282 ~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~ 360 (500)
T TIGR02633 282 SLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNI 360 (500)
T ss_pred EEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHh
Confidence 9999999999999999999999999998752 258999999987632 22356789999995 578899999999
Q ss_pred HHHhh--ccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCC
Q 001507 795 LFSAW--LRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 871 (1065)
Q Consensus 795 ~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD 871 (1065)
.+... .............+.++++++.+++.+ ..+..+ ..|||||||||+|||+|+.+|++|||||||+|||
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD 435 (500)
T TIGR02633 361 TLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVD 435 (500)
T ss_pred cchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcC
Confidence 87532 110001122333456789999999863 455543 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 872 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 872 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+.++..+++.|++++++|.|||++|||++ ++.+.||++++|. +|+++..++..
T Consensus 436 ~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~-~G~i~~~~~~~ 488 (500)
T TIGR02633 436 VGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIG-EGKLKGDFVNH 488 (500)
T ss_pred HhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEEccc
Confidence 99999999999999888999999999987 5778899999998 47888877543
No 26
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-66 Score=622.05 Aligned_cols=461 Identities=20% Similarity=0.290 Sum_probs=346.1
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCce
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRT 81 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~ 81 (1065)
++++++.+++ +.+|+|+||++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.
T Consensus 7 ~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 7 FDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred EeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCC
Confidence 3455555432 46999999999999999999999999999999999998775 999999998764321 2457
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
++|++|++.+++.+||+||+.++........ .+ ..+....++++++.+|
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~-~~------------------------------~~~~~~~~~~~l~~~~ 129 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGI-VN------------------------------RRLLNYEAREQLEHLG 129 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCC-CC------------------------------HHHHHHHHHHHHHHcC
Confidence 9999999988999999999988532100000 00 0011234778899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..++.+ ..|||||||||+|||||+.+|+|++|||||+|||+.++..+.+.|+++++. +++|++++|+.++
T Consensus 130 l~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tiiiitHd~~~ 202 (501)
T PRK11288 130 VDIDPDTPL-----KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAE--GRVILYVSHRMEE 202 (501)
T ss_pred CCCCcCCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCCHHH
Confidence 986665544 469999999999999999999999999999999999999999999998642 5677779999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHh
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHS 321 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1065)
+..+||+|++|++|+++..++.... . ...+..+.
T Consensus 203 ~~~~~d~i~~l~~G~i~~~~~~~~~--------------~-----------------------------~~~~~~~~--- 236 (501)
T PRK11288 203 IFALCDAITVFKDGRYVATFDDMAQ--------------V-----------------------------DRDQLVQA--- 236 (501)
T ss_pred HHHhCCEEEEEECCEEEeecCcccc--------------C-----------------------------CHHHHHHH---
Confidence 9999999999999999865431000 0 00000000
Q ss_pred ChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 001507 322 YHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMH 401 (1065)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~ 401 (1065)
+....
T Consensus 237 -------------------------------------------------------------------------~~~~~-- 241 (501)
T PRK11288 237 -------------------------------------------------------------------------MVGRE-- 241 (501)
T ss_pred -------------------------------------------------------------------------hcCCC--
Confidence 00000
Q ss_pred CCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcc
Q 001507 402 HKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVI 481 (1065)
Q Consensus 402 ~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~ 481 (1065)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHH
Q 001507 482 GYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYA 561 (1065)
Q Consensus 482 g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~ 561 (1065)
.
T Consensus 242 ---------------------------------------------------------------~---------------- 242 (501)
T PRK11288 242 ---------------------------------------------------------------I---------------- 242 (501)
T ss_pred ---------------------------------------------------------------c----------------
Confidence 0
Q ss_pred HHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchh
Q 001507 562 QNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKK 641 (1065)
Q Consensus 562 ~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 641 (1065)
. ...
T Consensus 243 --------------~------------------~~~-------------------------------------------- 246 (501)
T PRK11288 243 --------------G------------------DIY-------------------------------------------- 246 (501)
T ss_pred --------------c------------------ccc--------------------------------------------
Confidence 0 000
Q ss_pred hhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeeee
Q 001507 642 ELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTG 721 (1065)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~ 721 (1065)
... .. . . .+..+.++|+++ +.+++|+|+
T Consensus 247 ----------------~~~-----~~----~---~-------~~~~l~~~~~~~-----------------~~~l~~isl 274 (501)
T PRK11288 247 ----------------GYR-----PR----P---L-------GEVRLRLDGLKG-----------------PGLREPISF 274 (501)
T ss_pred ----------------ccc-----cc----C---C-------CCcEEEEecccc-----------------CCcccceeE
Confidence 000 00 0 0 001233444321 148899999
Q ss_pred EEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCC---CCCCCCCHHHHH
Q 001507 722 AFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESL 794 (1065)
Q Consensus 722 ~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~---~~~~~ltv~e~l 794 (1065)
+|++||++||+||||||||||+++|+|..+ +.+|+|.++|+++.. ...++.++|++|++ .+++.+|+.||+
T Consensus 275 ~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l 352 (501)
T PRK11288 275 SVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNI 352 (501)
T ss_pred EEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHh
Confidence 999999999999999999999999999876 568999999987532 12345789999985 478889999999
Q ss_pred HHHhhccC-CCC--CCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 795 LFSAWLRL-PSE--IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 795 ~~~~~~~~-~~~--~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
.+...... ... ......++.++++++.+++. +..++.+ ..|||||||||+|||+|+.+|+||||||||+||
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~L 427 (501)
T PRK11288 353 NISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGI 427 (501)
T ss_pred ccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCC
Confidence 87532111 000 01222335678899999994 5666554 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 871 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
|+.++..++++|++++++|.|||++|||++ .+.+.+|++++|. +|++++.|..++
T Consensus 428 D~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~-~g~i~~~~~~~~ 482 (501)
T PRK11288 428 DVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMR-EGRIAGELAREQ 482 (501)
T ss_pred CHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEE-CCEEEEEEcccc
Confidence 999999999999999888999999999987 5778899999998 579999987754
No 27
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2e-65 Score=671.29 Aligned_cols=210 Identities=22% Similarity=0.271 Sum_probs=176.3
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.++
T Consensus 1308 ~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~di 1374 (1560)
T PTZ00243 1308 SLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGREI 1374 (1560)
T ss_pred eEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEc
Confidence 5888998887731 22469999999999999999999999999999999999877 5689999999987
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccCcccCCC
Q 001507 767 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 836 (1065)
Q Consensus 767 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 836 (1065)
.. ..+++.+|||||++.+|.+ |++|||... ...+ ++.++++++..++.+. .|+.++. .
T Consensus 1375 ~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge-~ 1442 (1560)
T PTZ00243 1375 GAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLE-G 1442 (1560)
T ss_pred ccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccC-C
Confidence 53 5678899999999999976 999999531 1122 3457888888888654 2444443 2
Q ss_pred CCCCCHHHHHHHHHHHHHHhC-CCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEec
Q 001507 837 INGLSTEQRKRLTIAVELVAN-PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 915 (1065)
Q Consensus 837 ~~~lSgGqrqr~~ia~~l~~~-p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 915 (1065)
..+||||||||+||||||+++ |+||+||||||+||+++...|++.|++.. +++|||+|+|+++ ....||+|++|+
T Consensus 1443 G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd- 1518 (1560)
T PTZ00243 1443 GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD- 1518 (1560)
T ss_pred cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE-
Confidence 357999999999999999996 89999999999999999999999999864 5899999999975 567899999998
Q ss_pred CcEEEEeCCC
Q 001507 916 GGELIYAGPL 925 (1065)
Q Consensus 916 gg~~~~~g~~ 925 (1065)
+|+++..|++
T Consensus 1519 ~G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 HGAVAEMGSP 1528 (1560)
T ss_pred CCEEEEECCH
Confidence 5899999986
No 28
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=9e-65 Score=665.44 Aligned_cols=209 Identities=21% Similarity=0.276 Sum_probs=175.7
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.+.|+|+++.++. +.+.+|+||||+|+|||++||+|+||||||||+++|+|..+ .+|+|.|||.++
T Consensus 1217 ~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~di 1282 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVSW 1282 (1490)
T ss_pred eEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEc
Confidence 5888998887732 23579999999999999999999999999999999999865 479999999987
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccCcccCCC
Q 001507 767 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 836 (1065)
Q Consensus 767 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 836 (1065)
.. ..+|+.++||||++.+|++ |+||||.... . ..++.++++++..++.+. .|+.++. .
T Consensus 1283 ~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~----~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e-~ 1350 (1490)
T TIGR01271 1283 NSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------Q----WSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD-G 1350 (1490)
T ss_pred ccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------C----CCHHHHHHHHHHCCCHHHHHhCcccccccccc-C
Confidence 53 4578899999999999986 9999995321 1 123457888888888543 3444443 3
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecC
Q 001507 837 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 916 (1065)
Q Consensus 837 ~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 916 (1065)
..+||||||||+||||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....||+|++|+ +
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~-~ 1426 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIE-G 1426 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEE-C
Confidence 35799999999999999999999999999999999999999999999864 5899999999975 556799999998 5
Q ss_pred cEEEEeCCC
Q 001507 917 GELIYAGPL 925 (1065)
Q Consensus 917 g~~~~~g~~ 925 (1065)
|+++..|++
T Consensus 1427 G~ivE~g~p 1435 (1490)
T TIGR01271 1427 SSVKQYDSI 1435 (1490)
T ss_pred CEEEEeCCH
Confidence 899999976
No 29
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-66 Score=613.26 Aligned_cols=459 Identities=18% Similarity=0.251 Sum_probs=342.1
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCceEE
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSA 83 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~~~ 83 (1065)
++++.++ ++++|+|+||++++|++++|+||||||||||+++|+|.+.|+ +|+|.++|+++.... .++.++
T Consensus 3 nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~ 76 (491)
T PRK10982 3 NISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGIS 76 (491)
T ss_pred ceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEE
Confidence 4444443 246999999999999999999999999999999999998775 999999998765321 235699
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD 163 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~ 163 (1065)
|++|++.+++.+||+||+.++..... ....+ . .+....++++++.+||.
T Consensus 77 ~v~q~~~~~~~~tv~~~l~~~~~~~~-~~~~~-----------------~-------------~~~~~~~~~~l~~~~l~ 125 (491)
T PRK10982 77 MVHQELNLVLQRSVMDNMWLGRYPTK-GMFVD-----------------Q-------------DKMYRDTKAIFDELDID 125 (491)
T ss_pred EEecccccccCCCHHHHhhccccccc-ccccC-----------------H-------------HHHHHHHHHHHHHcCCC
Confidence 99999988899999999987531100 00000 0 00112477889999998
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHH
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 243 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~ 243 (1065)
+..++.+ .+|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++++. +.+|++++|+.+++.
T Consensus 126 ~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tvii~tH~~~~~~ 198 (491)
T PRK10982 126 IDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKER--GCGIVYISHKMEEIF 198 (491)
T ss_pred CCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCHHHHH
Confidence 7666554 469999999999999999999999999999999999999999999998643 566777999999999
Q ss_pred hhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhCh
Q 001507 244 ELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYH 323 (1065)
Q Consensus 244 ~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (1065)
.+||++++|++|+++..|+++++.. .+..+.
T Consensus 199 ~~~d~i~~l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~----- 229 (491)
T PRK10982 199 QLCDEITILRDGQWIATQPLAGLTM--------------------------------------------DKIIAM----- 229 (491)
T ss_pred HhCCEEEEEECCEEEeecChhhCCH--------------------------------------------HHHHHH-----
Confidence 9999999999999998876432100 000000
Q ss_pred hhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 001507 324 TGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHK 403 (1065)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~~ 403 (1065)
+....
T Consensus 230 -----------------------------------------------------------------------~~~~~---- 234 (491)
T PRK10982 230 -----------------------------------------------------------------------MVGRS---- 234 (491)
T ss_pred -----------------------------------------------------------------------HhCCC----
Confidence 00000
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhcccc
Q 001507 404 TIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGY 483 (1065)
Q Consensus 404 ~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g~ 483 (1065)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHHHH
Q 001507 484 DPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQN 563 (1065)
Q Consensus 484 ~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~~~ 563 (1065)
+.
T Consensus 235 -------------------------------------------------------------~~----------------- 236 (491)
T PRK10982 235 -------------------------------------------------------------LT----------------- 236 (491)
T ss_pred -------------------------------------------------------------cc-----------------
Confidence 00
Q ss_pred HHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhh
Q 001507 564 AASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKEL 643 (1065)
Q Consensus 564 ~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 643 (1065)
.
T Consensus 237 ---------------------------------------------------------------------------~---- 237 (491)
T PRK10982 237 ---------------------------------------------------------------------------Q---- 237 (491)
T ss_pred ---------------------------------------------------------------------------c----
Confidence 0
Q ss_pred hhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeeeeEE
Q 001507 644 QERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAF 723 (1065)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i 723 (1065)
..+. .. . +. .+..+.++|+++. .+.+|+|+|+++
T Consensus 238 --------------~~~~----~~----~--~~-------~~~~i~~~~l~~~---------------~~~~l~~vsl~i 271 (491)
T PRK10982 238 --------------RFPD----KE----N--KP-------GEVILEVRNLTSL---------------RQPSIRDVSFDL 271 (491)
T ss_pred --------------cccc----cc----C--CC-------CCcEEEEeCcccc---------------cCcccceeeEEE
Confidence 0000 00 0 00 0112444554431 124899999999
Q ss_pred eCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCC---CCCCCCCHHHHHHH
Q 001507 724 RPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESLLF 796 (1065)
Q Consensus 724 ~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~---~~~~~ltv~e~l~~ 796 (1065)
++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+. .+++.+|+.+|..+
T Consensus 272 ~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~ 349 (491)
T PRK10982 272 HKGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLI 349 (491)
T ss_pred eCCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheeh
Confidence 9999999999999999999999999876 5689999999876431 2245589999985 36788888877433
Q ss_pred Hhh--ccCCCC-CCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCH
Q 001507 797 SAW--LRLPSE-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 872 (1065)
Q Consensus 797 ~~~--~~~~~~-~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~ 872 (1065)
... ...... .......+.++++++.+++. +..+..+ ..|||||||||+|||+|+.+|+||||||||+|||+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~ 424 (491)
T PRK10982 350 SNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQI-----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDV 424 (491)
T ss_pred hhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCccccc-----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccCh
Confidence 210 000001 11223345678889998885 3444433 58999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 873 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 873 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
.++..+++.|+++.++|+|||++|||++ ++.+.||++++|.+ |+++..++..
T Consensus 425 ~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 425 GAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred hHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 9999999999999888999999999987 57788999999984 7888777553
No 30
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-64 Score=533.02 Aligned_cols=482 Identities=21% Similarity=0.292 Sum_probs=366.8
Q ss_pred HHHhhhhcCC-ccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCCCC-----
Q 001507 6 LRQLRIYRGN-RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV----- 77 (1065)
Q Consensus 6 ~~~~~~~~~~-~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~~~----- 77 (1065)
++++++.+.. ...+.++++|||++++||.++|+|.||||||-..+.+.|+++.. ...+|+|.|+|.++-...
T Consensus 9 v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr 88 (534)
T COG4172 9 IRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLR 88 (534)
T ss_pred eeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHh
Confidence 3555555542 34678999999999999999999999999999999999998752 235899999999864332
Q ss_pred --CCceEEEEcccc--ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHH
Q 001507 78 --PPRTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVV 153 (1065)
Q Consensus 78 --~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 153 (1065)
....|++++|+| .+-|-.|+...|.-..+++.. +.....+.++
T Consensus 89 ~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg---------------------------------~~~~~Ar~r~ 135 (534)
T COG4172 89 GVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRG---------------------------------LSRAAARARA 135 (534)
T ss_pred hhcccceEEEecccccccCcHhHHHHHHHHHHHHHhc---------------------------------ccHHHHHHHH
Confidence 124799999998 456667887777655544321 1122344568
Q ss_pred HHHHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEE
Q 001507 154 EYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVI 233 (1065)
Q Consensus 154 ~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii 233 (1065)
.++|+..|+++....+ +.++.+|||||||||.||.||+.+|++|+-||||++||...+.+|.++|+++.++. +..++
T Consensus 136 lelL~~VgI~~p~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~-gMa~l 212 (534)
T COG4172 136 LELLELVGIPEPEKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAEL-GMAIL 212 (534)
T ss_pred HHHHHHcCCCchhhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHh-CcEEE
Confidence 8899999998765443 56788999999999999999999999999999999999999999999999998775 56677
Q ss_pred EecCCchHHHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChh
Q 001507 234 SLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPG 313 (1065)
Q Consensus 234 ~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1065)
.||||..-+..++|+|+||.+|++++.|+.+++.. .|.+.. ...+.+.+
T Consensus 213 fITHDL~iVr~~ADrV~VM~~G~ivE~~~t~~lF~--------~PqHpY----Tr~Ll~ae------------------- 261 (534)
T COG4172 213 FITHDLGIVRKFADRVYVMQHGEIVETGTTETLFA--------APQHPY----TRKLLAAE------------------- 261 (534)
T ss_pred EEeccHHHHHHhhhhEEEEeccEEeecCcHHHHhh--------CCCChH----HHHHHhcC-------------------
Confidence 79999999999999999999999999998765521 111100 00000000
Q ss_pred HHHHHHHhChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Q 001507 314 KFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMT 393 (1065)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~ 393 (1065)
|.
T Consensus 262 ---------------------P~--------------------------------------------------------- 263 (534)
T COG4172 262 ---------------------PS--------------------------------------------------------- 263 (534)
T ss_pred ---------------------CC---------------------------------------------------------
Confidence 00
Q ss_pred HhcccCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHH
Q 001507 394 VFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFW 473 (1065)
Q Consensus 394 ~f~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~ 473 (1065)
T Consensus 264 -------------------------------------------------------------------------------- 263 (534)
T COG4172 264 -------------------------------------------------------------------------------- 263 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhH
Q 001507 474 VAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGF 553 (1065)
Q Consensus 474 ~~i~y~l~g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~ 553 (1065)
T Consensus 264 -------------------------------------------------------------------------------- 263 (534)
T COG4172 264 -------------------------------------------------------------------------------- 263 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcHHHHHHHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 001507 554 WVSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGK 633 (1065)
Q Consensus 554 ~isp~~y~~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~ 633 (1065)
+
T Consensus 264 ---------------------------g---------------------------------------------------- 264 (534)
T COG4172 264 ---------------------------G---------------------------------------------------- 264 (534)
T ss_pred ---------------------------C----------------------------------------------------
Confidence 0
Q ss_pred cccccchhhhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccce
Q 001507 634 QQAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRL 713 (1065)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1065)
. . .+. + +..++-+..+++...++....+-.. .....
T Consensus 265 --------------------------------~--~-~p~-~------~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~ 300 (534)
T COG4172 265 --------------------------------D--P-PPL-P------EDAPVLLEVEDLRVWFPIKGGFLRR--TVDHL 300 (534)
T ss_pred --------------------------------C--C-CCC-C------CCCCceEEecceEEEEecCCccccc--cchhe
Confidence 0 0 000 0 0001122222322222211111000 11235
Q ss_pred eEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCC--CCC
Q 001507 714 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHS 785 (1065)
Q Consensus 714 ~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~--~~~ 785 (1065)
.++++||+++++||.+||+|.||||||||-.+|.++..+ +|+|.++|.++.. ..+++.+-.|+||| .+.
T Consensus 301 ~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLs 377 (534)
T COG4172 301 RAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLS 377 (534)
T ss_pred EEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCC
Confidence 688999999999999999999999999999999998763 5999999998753 24567789999997 467
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
|.+||.+-+.-+.....+ ..+..++++++.+++++.||..-.-.+ .+.++|||||||++|||||+.+|++++|||
T Consensus 378 PRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~R----YPhEFSGGQRQRIAIARAliLkP~~i~LDE 452 (534)
T COG4172 378 PRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNR----YPHEFSGGQRQRIAIARALILKPELILLDE 452 (534)
T ss_pred cccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhc----CCcccCcchhhHHHHHHHHhcCCcEEEecC
Confidence 999999999877666654 456788899999999999997533221 236899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||.||..-+.+|+++|++|.++ |.+-++++||+. -+-.+||+++||. +|+|++.||.
T Consensus 453 PTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~-~GkiVE~G~~ 511 (534)
T COG4172 453 PTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMR-DGKIVEQGPT 511 (534)
T ss_pred CchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEe-CCEEeeeCCH
Confidence 99999999999999999999754 999999999986 4777899999998 5899999985
No 31
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.1e-64 Score=604.51 Aligned_cols=458 Identities=19% Similarity=0.253 Sum_probs=332.3
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.+++ ..+|+|+||++++|++++|+|||||||||||++|+|.+.|+ +|+|.++|.++.... .++.+
T Consensus 6 ~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 6 ISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred EEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHh
Confidence 4566666543 35999999999999999999999999999999999998775 999999997654321 12458
Q ss_pred EEEcccccc--C------CCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHH
Q 001507 83 AYVSQQDWQ--V------AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVE 154 (1065)
Q Consensus 83 ~yv~Q~~~~--~------~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 154 (1065)
+|++|++.. + ..+||+|++.+.. ..+.+++
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~ 117 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEV------------------------------------------KDPARCE 117 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccch------------------------------------------hHHHHHH
Confidence 999998542 1 1457777664310 0012367
Q ss_pred HHHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEE
Q 001507 155 YIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVIS 234 (1065)
Q Consensus 155 ~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~ 234 (1065)
++++.+||++..+..++ .|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.+|++
T Consensus 118 ~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tvii 190 (490)
T PRK10938 118 QLAQQFGITALLDRRFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQS--GITLVL 190 (490)
T ss_pred HHHHHcCCHhhhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhc--CCeEEE
Confidence 88999999877766554 59999999999999999999999999999999999999999999998653 567777
Q ss_pred ecCCchHHHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhH
Q 001507 235 LLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGK 314 (1065)
Q Consensus 235 ~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (1065)
++|+.+++.++||+|++|++|++++.|+++++.. . +.+..+.
T Consensus 191 ~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-------------~--~~~~~~~----------------------- 232 (490)
T PRK10938 191 VLNRFDEIPDFVQFAGVLADCTLAETGEREEILQ-------------Q--ALVAQLA----------------------- 232 (490)
T ss_pred EeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhc-------------c--hhhhhhh-----------------------
Confidence 9999999999999999999999999887544310 0 0000000
Q ss_pred HHHHHHhChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH
Q 001507 315 FAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTV 394 (1065)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~ 394 (1065)
. . +
T Consensus 233 ------~-------------------------------------------~------~---------------------- 235 (490)
T PRK10938 233 ------H-------------------------------------------S------E---------------------- 235 (490)
T ss_pred ------h-------------------------------------------h------h----------------------
Confidence 0 0 0
Q ss_pred hcccCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHH
Q 001507 395 FFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWV 474 (1065)
Q Consensus 395 f~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~ 474 (1065)
... ..
T Consensus 236 --~~~----~~--------------------------------------------------------------------- 240 (490)
T PRK10938 236 --QLE----GV--------------------------------------------------------------------- 240 (490)
T ss_pred --ccC----cc---------------------------------------------------------------------
Confidence 000 00
Q ss_pred hhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHh
Q 001507 475 AVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFW 554 (1065)
Q Consensus 475 ~i~y~l~g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~ 554 (1065)
..|
T Consensus 241 ---------------------------------------------------------------------~~~-------- 243 (490)
T PRK10938 241 ---------------------------------------------------------------------QLP-------- 243 (490)
T ss_pred ---------------------------------------------------------------------ccC--------
Confidence 000
Q ss_pred hcHHHHHHHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 001507 555 VSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQ 634 (1065)
Q Consensus 555 isp~~y~~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~ 634 (1065)
.
T Consensus 244 --------------------------~----------------------------------------------------- 244 (490)
T PRK10938 244 --------------------------E----------------------------------------------------- 244 (490)
T ss_pred --------------------------c-----------------------------------------------------
Confidence 0
Q ss_pred ccccchhhhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEeccccccccccccccee
Q 001507 635 QAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQ 714 (1065)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1065)
.. +. .. ... . +. ...-+.++|+++.+ +++.
T Consensus 245 ---~~-------------~~---~~------~~~---~--~~-------~~~~l~~~~l~~~~-------------~~~~ 274 (490)
T PRK10938 245 ---PD-------------EP---SA------RHA---L--PA-------NEPRIVLNNGVVSY-------------NDRP 274 (490)
T ss_pred ---cc-------------cc---cc------ccc---c--CC-------CCceEEEeceEEEE-------------CCee
Confidence 00 00 00 000 0 00 01124555655443 3356
Q ss_pred EeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCCCCCC--CC
Q 001507 715 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP--GL 788 (1065)
Q Consensus 715 il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~~~~~--~l 788 (1065)
+|+|+||++++||+++|+||||||||||+++|+|..+. ..+|+|.++|.+... ...++.+||++|++.+++ ..
T Consensus 275 il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~ 353 (490)
T PRK10938 275 ILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVST 353 (490)
T ss_pred EEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCC
Confidence 99999999999999999999999999999999997541 147999999976421 123467999999876543 35
Q ss_pred CHHHHHHHHhhc--cCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 789 TVLESLLFSAWL--RLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 789 tv~e~l~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
++++++.+.... ....... ....++++++++.+++.+ ..+..+ ..|||||||||+|||||+.+|++|||||
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDE 427 (490)
T PRK10938 354 SVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDE 427 (490)
T ss_pred cHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 677766543210 1111111 223456789999999986 666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCC-cEEEEEecCCcHHHHH-hcCeEEEEecCcEEEEeC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNTG-RTIVCTIHQPSIDIFE-SFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~-~~d~~~~l~~gg~~~~~g 923 (1065)
||+|||+.++..+.+.|++++++| .|||++||+++ ++.+ .+|++++|.+ |+++..-
T Consensus 428 Pt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~~ 485 (490)
T PRK10938 428 PLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRYV 485 (490)
T ss_pred ccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEee
Confidence 999999999999999999998765 47999999986 4555 4899999985 6766543
No 32
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.3e-62 Score=585.22 Aligned_cols=190 Identities=20% Similarity=0.261 Sum_probs=155.4
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCC-CCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLT 789 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~-~~~~~lt 789 (1065)
+++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.+++. ..+||++|+. .+++.+|
T Consensus 335 ~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~~~t 404 (556)
T PRK11819 335 GDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET--------VKLAYVDQSRDALDPNKT 404 (556)
T ss_pred CCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--------eEEEEEeCchhhcCCCCC
Confidence 34579999999999999999999999999999999999876 56899998542 1489999986 6778899
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
|+|++.+....... ... ....+++++.+++.+ ..+..+ ..|||||||||+|||+|+.+|++|||||||+
T Consensus 405 v~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 474 (556)
T PRK11819 405 VWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGERNRLHLAKTLKQGGNVLLLDEPTN 474 (556)
T ss_pred HHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 99999876432211 111 123456889999863 345443 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEE-EeCC
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGP 924 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~g~ 924 (1065)
|||+.++..+.+.|+++. | |||++||+++ .+...||++++|.++|++. +.|+
T Consensus 475 ~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g~ 527 (556)
T PRK11819 475 DLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEGN 527 (556)
T ss_pred CCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecCC
Confidence 999999999999999862 4 8999999986 5778899999998667766 4554
No 33
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.7e-63 Score=594.81 Aligned_cols=358 Identities=38% Similarity=0.644 Sum_probs=302.4
Q ss_pred cceeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEEC
Q 001507 684 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYIS 762 (1065)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~-~~~G~i~i~ 762 (1065)
.++.+.|+++++..+.+.. ..+++|+|||++++|||++||||||||||||||++|+|+..++ ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 4567889998877643211 4579999999999999999999999999999999999998753 689999999
Q ss_pred CccCCcccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCH
Q 001507 763 GYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLST 842 (1065)
Q Consensus 763 g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 842 (1065)
|++...+.+++.+|||+|||.++|++||+|++.|+|.+|+|...+.++++++|+++++.+||.+++|+++|....+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999888889999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 001507 843 EQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 922 (1065)
Q Consensus 843 Gqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 922 (1065)
||||||+||.+|+++|+||||||||||||+.++.+++++|+++|++|+|||+|+|||+.+++++||++++|.+ |+++|.
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999995 799999
Q ss_pred CCCCCchhHHHHHHHhcCCCCCCCCCCCcccceeeccCcc-ccccccccHHHHHHh------cHHHHHHH-HHHHhhCCC
Q 001507 923 GPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPV-EESRLGVDFAEIYRR------SNLFQRNR-ELVESLSKP 994 (1065)
Q Consensus 923 g~~~~~~~~~~~~~~~~~~~~~~~~~~npa~~~~~~~~~~-~~~~~~~~~~~~~~~------s~~~~~~~-~~~~~~~~~ 994 (1065)
|++ .++.+||+++ | ++||+++|||||++|+++.. ..+.. ....+.++. .+...+.. .....+...
T Consensus 253 G~~----~~~~~ff~~~-G-~~~P~~~Npadf~l~l~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-G-FPCPELENPADFLLDLLSVDSGTREL-EEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS 325 (613)
T ss_pred cCH----HHHHHHHHhC-C-CCCCCcCChHHHHHHHHccCCCchhH-HhHHHHHHHhhhccccchhhhhHHHHhhhcccc
Confidence 997 5789999999 4 46999999999999998842 11100 011111110 00000000 000001110
Q ss_pred CCCCcCcCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 001507 995 SPSSKKLNFSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRFAIKV 1063 (1065)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~~~~~~~~~~~~~~ 1063 (1065)
. + .+....++||.|+++|++|.+++.+|||.+.+.|+++++++|+++|++||+++++..+++.
T Consensus 326 ~----~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~~~ 388 (613)
T KOG0061|consen 326 K----K--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGIQN 388 (613)
T ss_pred c----c--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHH
Confidence 0 0 1111278999999999999999999999999999999999999999999999999888764
No 34
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.5e-61 Score=581.72 Aligned_cols=189 Identities=19% Similarity=0.250 Sum_probs=154.6
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCC-CCCCCCCH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLTV 790 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~-~~~~~ltv 790 (1065)
++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.+++. ..+||++|++ .+++.+||
T Consensus 334 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~~~tv 403 (552)
T TIGR03719 334 DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET--------VKLAYVDQSRDALDPNKTV 403 (552)
T ss_pred CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--------eEEEEEeCCccccCCCCcH
Confidence 4579999999999999999999999999999999999876 56899998542 1489999986 47788999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
.|++.+....... ... ...++++++.+++.+ ..+..+ ..|||||||||+|||+|+.+|++|||||||+|
T Consensus 404 ~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe~qrv~la~al~~~p~lllLDEPt~~ 473 (552)
T TIGR03719 404 WEEISGGLDIIQL---GKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGERNRVHLAKTLKSGGNVLLLDEPTND 473 (552)
T ss_pred HHHHHhhcccccc---Ccc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Confidence 9999886422111 111 123457889999864 345443 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEE-EeCC
Q 001507 870 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGP 924 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~g~ 924 (1065)
||+.++..+.+.|+++. .|||++|||++ .+...||++++|.+||++. +.|+
T Consensus 474 LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g~ 525 (552)
T TIGR03719 474 LDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEGN 525 (552)
T ss_pred CCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCCC
Confidence 99999999999999872 48999999986 5677899999998656766 4454
No 35
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-60 Score=574.58 Aligned_cols=198 Identities=18% Similarity=0.259 Sum_probs=161.9
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.+.++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGF-------------DNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEee-------------CCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 36666666543 34569999999999999999999999999999999999876 56899999873
Q ss_pred CcccccceEEEEcCCCC--CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHH
Q 001507 767 RQETFARISGYCEQNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTE 843 (1065)
Q Consensus 767 ~~~~~~~~~~~v~q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgG 843 (1065)
+.+||++|++. +++.+|++|++.+.. .. . ...+.++++++.+++. +..+..+ ..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 35899999864 556799999986421 11 1 1124577899999984 4555543 589999
Q ss_pred HHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEE-Ee
Q 001507 844 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YA 922 (1065)
Q Consensus 844 qrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~ 922 (1065)
||||++|||+|+.+|+||||||||+|||+.+...+.+.|+++ +.|||++|||++ .+...||++++|.+ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999986 57778999999985 6776 77
Q ss_pred CCC
Q 001507 923 GPL 925 (1065)
Q Consensus 923 g~~ 925 (1065)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 754
No 36
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.2e-60 Score=530.27 Aligned_cols=462 Identities=23% Similarity=0.357 Sum_probs=353.5
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC----Cce
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRT 81 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~----~~~ 81 (1065)
+++++..+ ..+++|+||||++++||+++|+|.||||||||+|+|+|.+.|+ +|+|.++|++..-..+ ..-
T Consensus 11 ~~~i~K~F---ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 11 LRGISKSF---GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eecceEEc---CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCC
Confidence 34555544 3467999999999999999999999999999999999999886 9999999998754332 246
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
|+.|.|+..++|++||.|||.++......... ++.......+.++|+.+|
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~------------------------------id~~~m~~~A~~~l~~lg 134 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGL------------------------------IDRKAMRRRARELLARLG 134 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCc------------------------------cCHHHHHHHHHHHHHHcC
Confidence 89999999999999999999876543221000 111223445788999999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
+....++.|++ ||+||||-|+||||+..+++|++||||||+|+...+..+++.++++.. .|..|+.|+|.++|
T Consensus 135 ~~~~~~~~v~~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~E 207 (500)
T COG1129 135 LDIDPDTLVGD-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDE 207 (500)
T ss_pred CCCChhhhhhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHH
Confidence 96557788775 999999999999999999999999999999999999999999999975 47888889999999
Q ss_pred HHhhcccEEEecCCcEEEEcCc-chHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPR-VSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFH 320 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~-~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1065)
++++||+|.||.||+++..++. .+.- .++..
T Consensus 208 i~~i~DritVlRDG~~v~~~~~~~~~~--------------------------------------------~~~lv---- 239 (500)
T COG1129 208 VFEIADRITVLRDGRVVGTRPTAAETS--------------------------------------------EDELV---- 239 (500)
T ss_pred HHHhcCEEEEEeCCEEeeecccccCCC--------------------------------------------HHHHH----
Confidence 9999999999999999877652 2110 00000
Q ss_pred hChhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCC
Q 001507 321 SYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTM 400 (1065)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~ 400 (1065)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhc
Q 001507 401 HHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYV 480 (1065)
Q Consensus 401 ~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l 480 (1065)
-.|
T Consensus 240 -----------------------------------------------------------------------------~~M 242 (500)
T COG1129 240 -----------------------------------------------------------------------------RLM 242 (500)
T ss_pred -----------------------------------------------------------------------------HHh
Confidence 000
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHH
Q 001507 481 IGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMY 560 (1065)
Q Consensus 481 ~g~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y 560 (1065)
+|-.
T Consensus 243 vGr~---------------------------------------------------------------------------- 246 (500)
T COG1129 243 VGRE---------------------------------------------------------------------------- 246 (500)
T ss_pred hCcc----------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccch
Q 001507 561 AQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSK 640 (1065)
Q Consensus 561 ~~~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~ 640 (1065)
.+ ..
T Consensus 247 --------------~~------------------~~-------------------------------------------- 250 (500)
T COG1129 247 --------------LE------------------DL-------------------------------------------- 250 (500)
T ss_pred --------------hh------------------hh--------------------------------------------
Confidence 00 00
Q ss_pred hhhhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeee
Q 001507 641 KELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVT 720 (1065)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs 720 (1065)
.+. . . . + ...+..++.++++. ...++|+|
T Consensus 251 ------------------~~~----~-~---~--~------~~~~~~l~v~~l~~-----------------~~~~~dvS 279 (500)
T COG1129 251 ------------------FPE----P-P---E--E------GIGEPVLEVRNLSG-----------------GGKVRDVS 279 (500)
T ss_pred ------------------ccc----c-c---c--c------CCCCcEEEEecCCC-----------------CCceeCce
Confidence 000 0 0 0 0 00011233333321 12467999
Q ss_pred eEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCC---CCCCCCCCHHHH
Q 001507 721 GAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQN---DIHSPGLTVLES 793 (1065)
Q Consensus 721 ~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~---~~~~~~ltv~e~ 793 (1065)
|++++||++||-|-=|||+|-|+++|.|..+ ..+|+|.+||+++... ..+.-++|||.| +-+++.+++.+|
T Consensus 280 f~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~N 357 (500)
T COG1129 280 FTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAEN 357 (500)
T ss_pred eEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHh
Confidence 9999999999999999999999999999665 4589999999986432 345569999987 567899999999
Q ss_pred HHHHhhccCC-C-CCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCC
Q 001507 794 LLFSAWLRLP-S-EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 871 (1065)
Q Consensus 794 l~~~~~~~~~-~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD 871 (1065)
+.++...+.. . -......++.+++..+.+++.--.-. ..+..||||++|||.|||.|..+|+||||||||.|+|
T Consensus 358 i~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~----~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGID 433 (500)
T COG1129 358 ITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPE----QPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGID 433 (500)
T ss_pred eehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCcc----chhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcc
Confidence 9887332211 1 23445556678888998887532211 1246899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 872 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 872 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
.-++.+|.++|++++++|++||++|-++. |+..+||||+||. +|+++-.=+..
T Consensus 434 VGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~-~Gri~~e~~~~ 486 (500)
T COG1129 434 VGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMR-EGRIVGELDRE 486 (500)
T ss_pred cchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEE-CCEEEEEeccc
Confidence 99999999999999999999999999986 8999999999998 57888654443
No 37
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.2e-59 Score=562.76 Aligned_cols=197 Identities=23% Similarity=0.234 Sum_probs=162.9
Q ss_pred EeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHHH
Q 001507 715 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESL 794 (1065)
Q Consensus 715 il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l 794 (1065)
.|+++||+|++||++||+||||||||||+++|+|..+ +.+|+|.++ ..++|++|+..+.+.+||+|++
T Consensus 354 ~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~----------~~i~y~~Q~~~~~~~~tv~e~l 421 (590)
T PRK13409 354 SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE----------LKISYKPQYIKPDYDGTVEDLL 421 (590)
T ss_pred EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----------eeEEEecccccCCCCCcHHHHH
Confidence 4899999999999999999999999999999999876 568999886 1489999998888899999999
Q ss_pred HHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHH
Q 001507 795 LFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARA 874 (1065)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~ 874 (1065)
.+..... .. ...++++++.+++.+..++.+ ..|||||||||+|||+|+.+|+||||||||+|||+.+
T Consensus 422 ~~~~~~~-----~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~ 488 (590)
T PRK13409 422 RSITDDL-----GS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQ 488 (590)
T ss_pred HHHhhhc-----Ch---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHH
Confidence 8752111 11 124678999999987766654 5799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCCc---hhHHHHHHHhc
Q 001507 875 AAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK---SCELIKYFEAV 939 (1065)
Q Consensus 875 ~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~---~~~~~~~~~~~ 939 (1065)
+..+.+.|++++++ |+|||++|||+. .+...+|++++|. | ++...|..... ...+..|+..+
T Consensus 489 ~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 489 RLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHASGPMDMREGMNRFLKEL 554 (590)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeecCCchhHHHHHHHHHHHc
Confidence 99999999999764 899999999986 4677899999996 4 67766654321 12344566666
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-59 Score=566.65 Aligned_cols=186 Identities=22% Similarity=0.350 Sum_probs=152.6
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCC--CCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND--IHSPGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~--~~~~~l 788 (1065)
+++.+|+|+||+|++|+++||+|||||||||||++|+|..+ +.+|+|.+++. ..+||++|+. .+.+..
T Consensus 323 ~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~--------~~igy~~Q~~~~~l~~~~ 392 (638)
T PRK10636 323 GDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG--------IKLGYFAQHQLEFLRADE 392 (638)
T ss_pred CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--------EEEEEecCcchhhCCccc
Confidence 34679999999999999999999999999999999999876 56899999742 2589999974 345667
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
|+.+++.- .. + ......+.++++.+++.. ..+..+ ..|||||||||+||++|+.+|+||||||||
T Consensus 393 ~~~~~~~~---~~-~-----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgGekqRl~La~~l~~~p~lLlLDEPt 458 (638)
T PRK10636 393 SPLQHLAR---LA-P-----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGGEKARLVLALIVWQRPNLLLLDEPT 458 (638)
T ss_pred hHHHHHHH---hC-c-----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 88877631 11 1 112345788899999853 455443 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEE-EeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~g~~ 925 (1065)
+|||+.+...+.+.|+++ +.|||++|||+. .+...||++++|.+ |+++ +.|+.
T Consensus 459 ~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~g~~ 512 (638)
T PRK10636 459 NHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFDGDL 512 (638)
T ss_pred CCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcCCCH
Confidence 999999999999999986 349999999986 57778999999985 7776 77865
No 39
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.9e-58 Score=563.73 Aligned_cols=191 Identities=22% Similarity=0.292 Sum_probs=154.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCC-CCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLT 789 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~-~~~~~lt 789 (1065)
+++.+|+|+||+|++|+++||+|||||||||||++|+|..+ +.+|+|.+ |.++ .+||++|+. .+++.+|
T Consensus 330 ~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~-------~i~y~~q~~~~l~~~~t 399 (635)
T PRK11147 330 DGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL-------EVAYFDQHRAELDPEKT 399 (635)
T ss_pred CCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc-------EEEEEeCcccccCCCCC
Confidence 34679999999999999999999999999999999999876 56899998 4321 489999975 5788999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
|.|++.+..... ... .....+.++++.+++. +..++.+ ..|||||||||+||++|+.+|++|||||||+
T Consensus 400 v~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqRl~la~al~~~p~lLlLDEPt~ 469 (635)
T PRK11147 400 VMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGERNRLLLARLFLKPSNLLILDEPTN 469 (635)
T ss_pred HHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 999998753211 001 1123467788888885 3445443 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe-cCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-RGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-~gg~~~~~g~~ 925 (1065)
|||+.+...+.+.|+++ +.|||++|||.. .+...||+++++. +|.-+.|.|+.
T Consensus 470 ~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g~y 523 (635)
T PRK11147 470 DLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVGGY 523 (635)
T ss_pred CCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccCCH
Confidence 99999999999999875 459999999976 5667899999997 44444556653
No 40
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=5.2e-57 Score=546.81 Aligned_cols=368 Identities=29% Similarity=0.475 Sum_probs=290.6
Q ss_pred cceeEEEeceeEEEeccc----------------ccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHH
Q 001507 684 QPLSMAFGNINYFVDVPV----------------ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLA 747 (1065)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~ 747 (1065)
.+++++|.+++|.++... ..++.++.++++.+|+|||+++++||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367899999999876432 1122233455688999999999999999999999999999999999
Q ss_pred CCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc
Q 001507 748 GRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL 827 (1065)
Q Consensus 748 g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~ 827 (1065)
|+.++...+|+|.+||++.... .++.+|||+|++.+++.+||+|++.|++.++.+.....+++.++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876434689999999876433 345689999999999999999999998877766544555666788999999999999
Q ss_pred ccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhc
Q 001507 828 SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESF 907 (1065)
Q Consensus 828 ~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~ 907 (1065)
+|+.++....++||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99998877778999999999999999999999999999999999999999999999998889999999999987788999
Q ss_pred CeEEEEecCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCcccceeeccCccccc------ccc---ccHHHHHHhc
Q 001507 908 DELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPVEES------RLG---VDFAEIYRRS 978 (1065)
Q Consensus 908 d~~~~l~~gg~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~npa~~~~~~~~~~~~~------~~~---~~~~~~~~~s 978 (1065)
|++++|+ +|+++|.|+. +++.+||+++| .+||+++|||||++|+++..... ... ....+.|++.
T Consensus 275 D~iilL~-~G~iv~~G~~----~~~~~~f~~~G--~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLS-EGRCLFFGKG----SDAMAYFESVG--FSPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEec-CCcEEEECCH----HHHHHHHHHCC--CCCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 9999998 5899999986 57999999994 47999999999999998753210 000 1122334321
Q ss_pred HHHHHHHHHHHhh--CC-CCC-----CCcCc-CCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 001507 979 NLFQRNRELVESL--SK-PSP-----SSKKL-NFSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGS 1049 (1065)
Q Consensus 979 ~~~~~~~~~~~~~--~~-~~~-----~~~~~-~~~~~~~~~~~~q~~~l~~r~~~~~~R~~~~~~~r~~~~~~~~l~~g~ 1049 (1065)
. .++..+..+.. .. ... ..+.. .....+.++||+|+++|++|++++ |||+.+.++|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 00000 011235678999999999999998 99999999999999999999999
Q ss_pred HhccCCCCcccccc
Q 001507 1050 ICWKFGAKRFAIKV 1063 (1065)
Q Consensus 1050 ~~~~~~~~~~~~~~ 1063 (1065)
+||+++ ..++|.
T Consensus 426 lf~~~~--~~~~~~ 437 (659)
T PLN03211 426 MWWHSD--FRDVQD 437 (659)
T ss_pred HHhcCC--HHHHHH
Confidence 999985 455554
No 41
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=5.2e-56 Score=540.13 Aligned_cols=200 Identities=21% Similarity=0.307 Sum_probs=155.1
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.+.++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 366677765441 23469999999999999999999999999999999999876 56899998752
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHH
Q 001507 767 RQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQR 845 (1065)
Q Consensus 767 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqr 845 (1065)
..+||++|+.. ..+++.++..+......+ ... .+.++++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999752 345666664322111111 111 245678899999863 44443 358999999
Q ss_pred HHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEE-EeCC
Q 001507 846 KRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGP 924 (1065)
Q Consensus 846 qr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~-~~g~ 924 (1065)
|||+|||+|+.+|++|||||||+|||+.+...+.+.|++. +.|||++|||+. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888764 349999999986 47778999999984 7877 6775
Q ss_pred C
Q 001507 925 L 925 (1065)
Q Consensus 925 ~ 925 (1065)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 42
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.5e-56 Score=516.19 Aligned_cols=230 Identities=26% Similarity=0.292 Sum_probs=174.8
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYV 85 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv 85 (1065)
+++++..+ ..+.+++|+|+++.+|+.++|||+|||||||||++|+|.+.|+ +|+|...+. -+++|+
T Consensus 6 ~~~ls~~~---g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l 71 (530)
T COG0488 6 LENLSLAY---GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYL 71 (530)
T ss_pred EeeeEEee---CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEe
Confidence 34555555 3457999999999999999999999999999999999999876 999987641 368999
Q ss_pred ccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHh-hhhccCCcchhHHHHHHHHhCCcc
Q 001507 86 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMK-SFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 86 ~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
+|++...+..||.+.+.-+..- .++...+.........-........+.. ...++.+..+.+++.+|..+|++.
T Consensus 72 ~Q~~~~~~~~tv~~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~ 146 (530)
T COG0488 72 SQEPPLDPEKTVLDYVIEGFGE-----LRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPD 146 (530)
T ss_pred CCCCCcCCCccHHHHHHhhhHH-----HHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCc
Confidence 9999988889999999765321 1111111111110000000011111111 123556888899999999999988
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
. ++.++ +||||||.||+||+||..+|++|+||||||+||..+..++-+.|++. .+ ++|+++||+.++.+
T Consensus 147 ~-~~~~~-----~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~ 215 (530)
T COG0488 147 E-DRPVS-----SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDN 215 (530)
T ss_pred c-cCchh-----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHH
Confidence 7 66665 59999999999999999999999999999999999999999999864 34 67779999999999
Q ss_pred hcccEEEecCCcEE-EEcCcch
Q 001507 245 LFDDVILLSEGQIV-YQGPRVS 265 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~-~~G~~~~ 265 (1065)
.|++|+-++.|++. |.|+.+.
T Consensus 216 V~t~I~~ld~g~l~~y~Gny~~ 237 (530)
T COG0488 216 VATHILELDRGKLTPYKGNYSS 237 (530)
T ss_pred HhhheEEecCCceeEecCCHHH
Confidence 99999999999875 6665443
No 43
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=9.4e-57 Score=546.26 Aligned_cols=346 Identities=34% Similarity=0.554 Sum_probs=292.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCccCCcccccceEEEEcCCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~lt 789 (1065)
+++.+|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.++....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3578999999999999999999999999999999999987643 358999999998766667788999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCC-CCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPG-INGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~-~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
|+||+.|++.++.+.....+++.++++++++.++|.+++|+.+|.+. .++|||||||||+||+||+.+|++|+|||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999998887666667777889999999999999999998653 56899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPG 948 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1065)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.|+. +++.+||+++| .+||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~g--~~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDLG--HPCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHcC--CCCCCC
Confidence 9999999999999999988899999999999878999999999998 5899999997 57899999984 579999
Q ss_pred CCcccceeeccCccccccc-----cccHHHHHHhcHHHHHHHHHHHhhCCCCC---CCcCcCCCCccCCCHHHHHHHHHH
Q 001507 949 YNPAAWMLEVTSPVEESRL-----GVDFAEIYRRSNLFQRNRELVESLSKPSP---SSKKLNFSTKYSQSFANQFLACLR 1020 (1065)
Q Consensus 949 ~npa~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~q~~~l~~ 1020 (1065)
.|||||++|+++...+.+. ..++.+.|+.++.+++..+.......... .........++..+|+.|+++|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 9999999999875432211 12345556666555443333221111110 011111224578999999999999
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 001507 1021 KQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRFAIKV 1063 (1065)
Q Consensus 1021 r~~~~~~R~~~~~~~r~~~~~~~~l~~g~~~~~~~~~~~~~~~ 1063 (1065)
|++++.||||.++.+|+++++++|+++|++||++++++.+++.
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~~~~~ 391 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQKGVQN 391 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999888764
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.6e-55 Score=483.34 Aligned_cols=464 Identities=20% Similarity=0.309 Sum_probs=358.0
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC----CceEE
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSA 83 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~----~~~~~ 83 (1065)
+++..++ ...+++|||+++++||+.+|+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..+ +..||
T Consensus 9 ~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIG 82 (501)
T COG3845 9 GITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIG 82 (501)
T ss_pred ccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCc
Confidence 4444443 578999999999999999999999999999999999999887 9999999998754433 34689
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD 163 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~ 163 (1065)
+|.|+..+++++||.|||..+..... ..+ .+....+++++++.+.+||+
T Consensus 83 MVhQHF~Lv~~lTV~ENiiLg~e~~~-~~~------------------------------~~~~~~~~~i~~l~~~yGl~ 131 (501)
T COG3845 83 MVHQHFMLVPTLTVAENIILGLEPSK-GGL------------------------------IDRRQARARIKELSERYGLP 131 (501)
T ss_pred EEeeccccccccchhhhhhhcCcccc-ccc------------------------------cCHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999988754210 000 01122345688999999999
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHH
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 243 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~ 243 (1065)
-..|..|++ ||-||||||.|-+||+.+|++|+|||||+-|-|....++++.++++++. |.+|+.|||-..|+.
T Consensus 132 vdp~~~V~d-----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~--G~tIi~ITHKL~Ev~ 204 (501)
T COG3845 132 VDPDAKVAD-----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAE--GKTIIFITHKLKEVM 204 (501)
T ss_pred CCccceeec-----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeccHHHHH
Confidence 888888875 9999999999999999999999999999999999999999999999763 677778999999999
Q ss_pred hhcccEEEecCCcEEEEcCc-chHHHHHHhCCCCCCCCCChhHHHHHhcCccchhccccCCCCCCCCCChhHHHHHHHhC
Q 001507 244 ELFDDVILLSEGQIVYQGPR-VSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSY 322 (1065)
Q Consensus 244 ~~~D~v~~l~~G~i~~~G~~-~~~~~~f~~lG~~~p~~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1065)
++||++.||.+|+++..-++ .+. +..++++
T Consensus 205 ~iaDrvTVLR~Gkvvgt~~~~~~~--------------------------------------------t~~ela~----- 235 (501)
T COG3845 205 AIADRVTVLRRGKVVGTVDPVAET--------------------------------------------TEEELAE----- 235 (501)
T ss_pred HhhCeeEEEeCCeEEeeecCCCCC--------------------------------------------CHHHHHH-----
Confidence 99999999999998643321 000 0000000
Q ss_pred hhhhhhHHhhcCCccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 001507 323 HTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHH 402 (1065)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~l~~g~~f~~~~~~~ 402 (1065)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCcccchhHHHHHHHHHHhhHHHHHHHHHHhhhhhccc
Q 001507 403 KTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIG 482 (1065)
Q Consensus 403 ~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~~~~~~~~~~~~~p~~~i~~~~~~~i~y~l~g 482 (1065)
.|+|
T Consensus 236 ----------------------------------------------------------------------------lMvG 239 (501)
T COG3845 236 ----------------------------------------------------------------------------LMVG 239 (501)
T ss_pred ----------------------------------------------------------------------------HhcC
Confidence 0000
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHhhccccCCCCcchhhHHhHhhcHHHHHH
Q 001507 483 YDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQ 562 (1065)
Q Consensus 483 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~~~~~l~~g~~i~~~~ip~~~~w~~~isp~~y~~ 562 (1065)
-.
T Consensus 240 ~~------------------------------------------------------------------------------ 241 (501)
T COG3845 240 RE------------------------------------------------------------------------------ 241 (501)
T ss_pred Cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHhhcCCcccccCCCCCccchhHHhhhcCcCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhh
Q 001507 563 NAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKE 642 (1065)
Q Consensus 563 ~~~~~ne~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~g~ll~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~ 642 (1065)
+. .
T Consensus 242 ---------------------------v~-----------------------------------------------~--- 244 (501)
T COG3845 242 ---------------------------VV-----------------------------------------------L--- 244 (501)
T ss_pred ---------------------------cc-----------------------------------------------c---
Confidence 00 0
Q ss_pred hhhHhhhhcCcchhHhhhhhhhcccCccCcccccCCcccCccceeEEEeceeEEEecccccccccccccceeEeeeeeeE
Q 001507 643 LQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGA 722 (1065)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~ 722 (1065)
..+ .... .. ...-++.++++.... .....+++|||+
T Consensus 245 ---------------~~~----~~~~-------~p------g~~vL~V~~L~v~~~------------~~~~~v~~vs~~ 280 (501)
T COG3845 245 ---------------RVV----KPPS-------TP------GEVVLEVEDLSVKDR------------RGVTAVKDVSFE 280 (501)
T ss_pred ---------------ccc----cCCC-------CC------CCeEEEEeeeEeecC------------CCCceeeeeeeE
Confidence 000 0000 00 012355555543321 124678899999
Q ss_pred EeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC----Ccc-cccceEEEEcCCC---CCCCCCCHHHHH
Q 001507 723 FRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK----RQE-TFARISGYCEQND---IHSPGLTVLESL 794 (1065)
Q Consensus 723 i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~----~~~-~~~~~~~~v~q~~---~~~~~ltv~e~l 794 (1065)
+++||++||.|-.|-|-+.|+.+|+|..+ +.+|+|.++|+++ +.. .++.-+||||.|- .+.+.+|+.||+
T Consensus 281 Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~--~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~ 358 (501)
T COG3845 281 VRAGEIVGIAGVAGNGQSELVEAISGLRK--PASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENL 358 (501)
T ss_pred EecCcEEEEEecCCCCHHHHHHHHhCCCc--cCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHh
Confidence 99999999999999999999999999875 3469999999986 222 2344689999984 467899999999
Q ss_pred HHHhhccCC----CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 795 LFSAWLRLP----SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 795 ~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
.+...-+.| .-.......+...++++.++....... ...+.||||++||+-+||+|.++|++|+..+||.||
T Consensus 359 vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGL 434 (501)
T COG3845 359 VLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGL 434 (501)
T ss_pred hhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCccc
Confidence 876432211 123445566778899999988633221 124689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 871 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
|..+...|.+.|.+.+++|+.|++++-+++ +++..+|||.||. +|+++...++.+
T Consensus 435 DvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~-~Gri~~~~~~~~ 489 (501)
T COG3845 435 DVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIY-EGRIVGIVPPEE 489 (501)
T ss_pred cHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeee-CCceeccccccc
Confidence 999999999999999999999999999998 8999999999998 589988877654
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-48 Score=380.02 Aligned_cols=211 Identities=27% Similarity=0.376 Sum_probs=186.0
Q ss_pred ccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC----cccccceEEEEc
Q 001507 704 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR----QETFARISGYCE 779 (1065)
Q Consensus 704 ~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~----~~~~~~~~~~v~ 779 (1065)
++..+.+++..+|+|||++|++||+++|+|||||||||||+||.++.. +.+|+|.++|.++. ....|+.+|+|+
T Consensus 6 ~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGmVF 83 (240)
T COG1126 6 KNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGMVF 83 (240)
T ss_pred EeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCeec
Confidence 344455678899999999999999999999999999999999999887 57999999997653 235778899999
Q ss_pred CCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 780 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 780 q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
|+..+||++||.||+..+...- ...+.++.++...++|+.+||.+.+|... .+|||||||||+|||||+.+|+
T Consensus 84 Q~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGGQqQRVAIARALaM~P~ 156 (240)
T COG1126 84 QQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMDPK 156 (240)
T ss_pred ccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcHHHHHHHHHHHHcCCCC
Confidence 9999999999999999875322 23456667778889999999999888764 5899999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
++++|||||+|||+...++.+.+++|+++|.|.||+||++.. ..+.+|||++|+ +|+++..|++
T Consensus 157 vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd-~G~iie~g~p 220 (240)
T COG1126 157 VMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMD-QGKIIEEGPP 220 (240)
T ss_pred EEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEee-CCEEEEecCH
Confidence 999999999999999999999999999999999999999874 667899999998 5899999876
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-48 Score=379.96 Aligned_cols=229 Identities=27% Similarity=0.377 Sum_probs=192.9
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC----CCCceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF----VPPRTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~----~~~~~~ 82 (1065)
++++.+++ ...+|+|||+++++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..++.+
T Consensus 6 ~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 6 KNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred EeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhc
Confidence 45555554 457999999999999999999999999999999999998776 99999999765422 246789
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|+|+|+..+||++||.||+..+...-. .+...++++++.++|+.+||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~---------------------------------~~~k~eA~~~A~~lL~~VGL 126 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVK---------------------------------KLSKAEAREKALELLEKVGL 126 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHc---------------------------------CCCHHHHHHHHHHHHHHcCc
Confidence 999999999999999999998643210 01122334558889999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
.+.+|.. +.+|||||||||+|||||+.+|+++++|||||+|||+...++.+.+++++++ +.|.+++||.+.++
T Consensus 127 ~~ka~~y-----P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FA 199 (240)
T COG1126 127 ADKADAY-----PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFA 199 (240)
T ss_pred hhhhhhC-----ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHH
Confidence 9988765 4579999999999999999999999999999999999999999999999874 67788899999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQE 289 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~ 289 (1065)
.+.+|||++|++|++++.|+++++ |..|.+....+|+..
T Consensus 200 r~VadrviFmd~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 200 REVADRVIFMDQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred HHhhheEEEeeCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 999999999999999999998876 345666556666654
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.3e-45 Score=405.65 Aligned_cols=203 Identities=21% Similarity=0.261 Sum_probs=156.7
Q ss_pred ceeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc
Q 001507 685 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 764 (1065)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~ 764 (1065)
+..+.++|+++.++ ++..++++++|-|.+++.+|++||||+||||||+++.|... +..|.|.-.-+
T Consensus 387 ~pvi~~~nv~F~y~------------~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYS------------DNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCC------------CcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc
Confidence 44566777766542 22368899999999999999999999999999999999877 46787754332
Q ss_pred cCCcccccceEEEEcCC--CCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCH
Q 001507 765 PKRQETFARISGYCEQN--DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLST 842 (1065)
Q Consensus 765 ~~~~~~~~~~~~~v~q~--~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSg 842 (1065)
. .+++.-|+ +.+.-..++.|+++=.. + ...+.+.+..++..+||....... ..++||+
T Consensus 453 ~--------~~~~y~Qh~~e~ldl~~s~le~~~~~~----~----~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~ 512 (614)
T KOG0927|consen 453 N--------KLPRYNQHLAEQLDLDKSSLEFMMPKF----P----DEKELEEMRSILGRFGLTGDAQVV----PMSQLSD 512 (614)
T ss_pred c--------cchhhhhhhHhhcCcchhHHHHHHHhc----c----ccchHHHHHHHHHHhCCCcccccc----chhhccc
Confidence 1 13344443 33444667778775211 1 123445678899999998655443 2468999
Q ss_pred HHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 001507 843 EQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 922 (1065)
Q Consensus 843 Gqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 922 (1065)
|||+||.+|+.++.+|.+|+|||||+|||..+...+-+.|.+. ..+||+++||.. -+-+.++++.+..+++...+.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecC
Confidence 9999999999999999999999999999999999999999874 568999999986 477788999999988888888
Q ss_pred CCC
Q 001507 923 GPL 925 (1065)
Q Consensus 923 g~~ 925 (1065)
|..
T Consensus 589 G~i 591 (614)
T KOG0927|consen 589 GDI 591 (614)
T ss_pred ccH
Confidence 863
No 48
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-45 Score=370.76 Aligned_cols=219 Identities=26% Similarity=0.374 Sum_probs=190.3
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
+++++..++ ++.+++|+|++|++||+++++|||||||||+||+|.+++.|+ +|+|.+||+++.+.. .++.|
T Consensus 4 ~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~I 77 (309)
T COG1125 4 FENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKI 77 (309)
T ss_pred eeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhh
Confidence 345665554 457999999999999999999999999999999999999886 999999999987654 57899
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|||-|+-.+||++||.|||.+...+.+- ++++.+.+++++|+.+||
T Consensus 78 GYviQqigLFPh~Tv~eNIa~VP~L~~w----------------------------------~k~~i~~r~~ELl~lvgL 123 (309)
T COG1125 78 GYVIQQIGLFPHLTVAENIATVPKLLGW----------------------------------DKERIKKRADELLDLVGL 123 (309)
T ss_pred hhhhhhcccCCCccHHHHHHhhhhhcCC----------------------------------CHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999886554321 112234569999999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
+.. ...+++++.|||||+|||.+||||+.+|+|+++|||+++|||.++..+.+.++++.++. ++||+.+|||.+|+
T Consensus 124 ~p~---~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA 199 (309)
T COG1125 124 DPS---EYADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEA 199 (309)
T ss_pred CHH---HHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHH
Confidence 752 12356778899999999999999999999999999999999999999999999998776 56677799999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
..++|||++|++|+++..+++++++.
T Consensus 200 ~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 200 LKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HhhhceEEEecCCeEEEeCCHHHHHh
Confidence 99999999999999999999999875
No 49
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-44 Score=362.67 Aligned_cols=221 Identities=25% Similarity=0.359 Sum_probs=189.7
Q ss_pred ccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCC
Q 001507 708 VLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQN 781 (1065)
Q Consensus 708 ~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~ 781 (1065)
+.++++.|++||+++|++||+++||||||+||||||++|.|+.+ +.+|+|.++|.++.. ...++++|+++|+
T Consensus 16 ~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~ 93 (263)
T COG1127 16 KSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDIPQLSEEELYEIRKRMGVLFQQ 93 (263)
T ss_pred eecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcchhccCHHHHHHHHhheeEEeec
Confidence 34578999999999999999999999999999999999999988 579999999988642 2456789999999
Q ss_pred CCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCc
Q 001507 782 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSI 860 (1065)
Q Consensus 782 ~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~i 860 (1065)
-.+|..+||+||+.|..+ .....+.+..++.+..-++.+||... ++.. +++||||++||++|||||+.+|+|
T Consensus 94 gALFssltV~eNVafplr--e~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsELSGGM~KRvaLARAialdPel 166 (263)
T COG1127 94 GALFSSLTVFENVAFPLR--EHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSELSGGMRKRVALARAIALDPEL 166 (263)
T ss_pred cccccccchhHhhheehH--hhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chhhcchHHHHHHHHHHHhcCCCE
Confidence 999999999999998643 33345667777788888999999876 4443 368999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCCchh----HHHHH
Q 001507 861 VFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSC----ELIKY 935 (1065)
Q Consensus 861 l~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~~----~~~~~ 935 (1065)
||+||||+||||.++..+.++|+++.+. |.|+|++|||.+ +++..+|++++|. +|+++..|++++... -+.+|
T Consensus 167 l~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~-~gkv~~~Gt~~el~~sd~P~v~qf 244 (263)
T COG1127 167 LFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLA-DGKVIAEGTPEELLASDDPWVRQF 244 (263)
T ss_pred EEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEe-CCEEEEeCCHHHHHhCCCHHHHHH
Confidence 9999999999999999999999999876 999999999997 6899999999998 589999999753211 24556
Q ss_pred HHhc
Q 001507 936 FEAV 939 (1065)
Q Consensus 936 ~~~~ 939 (1065)
|...
T Consensus 245 ~~G~ 248 (263)
T COG1127 245 FNGI 248 (263)
T ss_pred hcCC
Confidence 6654
No 50
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-45 Score=377.43 Aligned_cols=224 Identities=27% Similarity=0.381 Sum_probs=193.8
Q ss_pred cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCceEEEEccccc
Q 001507 17 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDW 90 (1065)
Q Consensus 17 ~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~~~~yv~Q~~~ 90 (1065)
....+|+|||++|++||+++|+|+||||||||++++.++-.|+ +|+|.++|.++.... .++.||+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3477999999999999999999999999999999999998876 999999998876543 3578999999999
Q ss_pred cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccc
Q 001507 91 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 170 (1065)
Q Consensus 91 ~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~v 170 (1065)
++...||+||+.|+++..+.. +.+.++++.++|+.+||++.+|..
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhccC-
Confidence 999999999999998765421 112345699999999999887754
Q ss_pred cCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEE
Q 001507 171 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 250 (1065)
Q Consensus 171 g~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~ 250 (1065)
+.+|||||||||+|||||+.+|+||++|||||+|||.++..|.+.|+++.++. +.||+.++|.++.+.++||||.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 55799999999999999999999999999999999999999999999998875 6777789999999999999999
Q ss_pred EecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHhc
Q 001507 251 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVT 291 (1065)
Q Consensus 251 ~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~~ 291 (1065)
+|++|++++.|+..++ |..|.+.-..+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999887 34455555555655443
No 51
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=374.69 Aligned_cols=203 Identities=26% Similarity=0.356 Sum_probs=183.8
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 785 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~~~~ 785 (1065)
...+|+|||++|++||++||+|+||||||||++++.++.. |.+|+|.+||.++.. ...|+.+|+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 4679999999999999999999999999999999999887 579999999976532 34678899999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
...||.||+.|...+.. .++++.+++|.++++.+||.+.++... .+|||||||||+|||||+.+|+||++||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999877664 467888899999999999998887754 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|||+|||++...|+++|+++.++ |.||+++||+++ -+.+.|||+.+|+ .|+++..|+..
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~-~G~lvE~G~v~ 227 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLD-QGRLVEEGTVS 227 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEee-CCEEEEeccHH
Confidence 99999999999999999999765 999999999987 4778899999998 58999999864
No 52
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.8e-44 Score=369.11 Aligned_cols=218 Identities=26% Similarity=0.404 Sum_probs=183.7
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.++++|+++.+ ++.++|+||||++++|++++|+||||||||||+++|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y-------------~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSY-------------GNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEE-------------CCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 35666776655 33369999999999999999999999999999999999877 5799999999987
Q ss_pred CcccccceEEEEcCCCCC--CCCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHH
Q 001507 767 RQETFARISGYCEQNDIH--SPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTE 843 (1065)
Q Consensus 767 ~~~~~~~~~~~v~q~~~~--~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 843 (1065)
....-+..+|||||...+ -..+||+|-+..+..-+.. .....+.+++.++++|+.+|+.+++++.++ .||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcH
Confidence 654445789999996422 2347999999886432221 111223446789999999999999999875 79999
Q ss_pred HHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 844 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 844 qrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
|+|||.|||||+++|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||+++.|+ +++.+.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999988999999999998 5889999999996 5899999
Q ss_pred CCCC
Q 001507 924 PLGS 927 (1065)
Q Consensus 924 ~~~~ 927 (1065)
++.+
T Consensus 221 ~~~~ 224 (254)
T COG1121 221 PPEE 224 (254)
T ss_pred Chhh
Confidence 8854
No 53
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.3e-44 Score=376.24 Aligned_cols=209 Identities=27% Similarity=0.409 Sum_probs=182.7
Q ss_pred ccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCC
Q 001507 710 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 710 ~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~ 786 (1065)
++++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|+++.. +.+.+.+|||||......
T Consensus 12 y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~ 89 (258)
T COG1120 12 YGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPF 89 (258)
T ss_pred ECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCchhhcCHHHHhhhEEEeccCCCCCC
Confidence 457899999999999999999999999999999999999877 568999999998643 567789999999998888
Q ss_pred CCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 787 GLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
.+||+|.+.++..-+.. .....+++.+.++++++.+++.+++++.+ ..|||||||||.|||||+++|+||+|||
T Consensus 90 ~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGGerQrv~iArALaQ~~~iLLLDE 164 (258)
T COG1120 90 GLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGGERQRVLIARALAQETPILLLDE 164 (258)
T ss_pred CcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChhHHHHHHHHHHHhcCCCEEEeCC
Confidence 99999999987432111 11123445567999999999999999876 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
|||+||...+.+++++++++++ +|+|||++.||++ ....+||++++|+ +|+++..|++.+
T Consensus 165 PTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN-~A~ryad~~i~lk-~G~i~a~G~p~e 225 (258)
T COG1120 165 PTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLN-LAARYADHLILLK-DGKIVAQGTPEE 225 (258)
T ss_pred CccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEE-CCeEEeecCcch
Confidence 9999999999999999999984 5999999999998 4788999999998 589999998753
No 54
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-44 Score=365.72 Aligned_cols=194 Identities=25% Similarity=0.379 Sum_probs=173.8
Q ss_pred ccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCC
Q 001507 710 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 710 ~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~lt 789 (1065)
++...+|+|||++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.++. .....+|||+|++.++|.+|
T Consensus 13 f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~T 88 (248)
T COG1116 13 FGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLT 88 (248)
T ss_pred eCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCcccC--CCCCCEEEEeccCcccchhh
Confidence 345789999999999999999999999999999999999987 56999999999873 23456899999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
|+||+.|+...+. ...++..++++++++.+||.+..+... ++|||||||||+|||||+.+|+||+||||+++
T Consensus 89 v~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgA 160 (248)
T COG1116 89 VLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQRVAIARALATRPKLLLLDEPFGA 160 (248)
T ss_pred HHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHHHHHHHHHHhcCCCEEEEcCCcch
Confidence 9999999877653 344566678999999999999998764 68999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecC
Q 001507 870 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRG 916 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 916 (1065)
||..++..+++.|.++.++ ++||+++|||.+ |...++|||++|.++
T Consensus 161 LDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 161 LDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred hhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 9999999999999999754 899999999997 677889999999853
No 55
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-44 Score=359.64 Aligned_cols=208 Identities=25% Similarity=0.348 Sum_probs=186.9
Q ss_pred cccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC
Q 001507 707 GVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI 783 (1065)
Q Consensus 707 ~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~ 783 (1065)
++.++++.+++|+|++|++||+++++|||||||||+|++|.++.. +++|+|++||+++.. ..+|+.+|||-|.-.
T Consensus 8 sk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~~~d~~~LRr~IGYviQqig 85 (309)
T COG1125 8 SKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDISDLDPVELRRKIGYVIQQIG 85 (309)
T ss_pred ehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecccCCHHHHHHhhhhhhhhcc
Confidence 344567899999999999999999999999999999999999987 679999999998754 467899999999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc--cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCce
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS--LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 861 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~--~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il 861 (1065)
+||++||.||+.+-..+. .+++++.+++++++++.+||.. +.++. +.+|||||+|||.+||||+.+|+||
T Consensus 86 LFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAadP~il 157 (309)
T COG1125 86 LFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAADPPIL 157 (309)
T ss_pred cCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcCCCeE
Confidence 999999999999876554 4567888899999999999974 66654 3689999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 862 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 862 ~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+||||+++|||-++..+++.++++.++ |+|||++|||.+ |.+.++||+++|+ +|+++..+++.
T Consensus 158 LMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q~~~P~ 221 (309)
T COG1125 158 LMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQYDTPD 221 (309)
T ss_pred eecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEEeCCHH
Confidence 999999999999999999999999765 999999999997 7899999999998 58999888764
No 56
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.6e-43 Score=388.94 Aligned_cols=206 Identities=32% Similarity=0.459 Sum_probs=184.3
Q ss_pred cccc-ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCC
Q 001507 708 VLED-RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIH 784 (1065)
Q Consensus 708 ~~~~-~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~ 784 (1065)
+.++ ++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+
T Consensus 12 k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~ 89 (293)
T COG1131 12 KKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVVKEPAKVRRRIGYVPQEPSL 89 (293)
T ss_pred EEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCccCHHHHHhheEEEccCCCC
Confidence 3456 5899999999999999999999999999999999999987 579999999987654 4567889999999999
Q ss_pred CCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeec
Q 001507 785 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 864 (1065)
Q Consensus 785 ~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lD 864 (1065)
++.+||+|++.|.+.++.+.. ....++++++++.++|.+..++.+ ++||+||||||+||+||+++|++||||
T Consensus 90 ~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~kqrl~ia~aL~~~P~lliLD 161 (293)
T COG1131 90 YPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKV-----RTLSGGMKQRLSIALALLHDPELLILD 161 (293)
T ss_pred CccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 999999999999999886542 445567999999999998555443 589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCC-cEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 865 EPTSGLDARAAAIVMRTVRNIVNTG-RTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 865 EPtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+||||.++..+++.|++++++| +||+++||+++ ++...||+|++|+ +|++++.|++
T Consensus 162 EPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~-~G~~~~~g~~ 221 (293)
T COG1131 162 EPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILN-DGKIIAEGTP 221 (293)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEe-CCEEEEeCCH
Confidence 9999999999999999999999887 89999999997 6888899999998 5899999975
No 57
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-44 Score=390.50 Aligned_cols=231 Identities=29% Similarity=0.404 Sum_probs=199.2
Q ss_pred HHHHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC-CceE
Q 001507 4 ALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTS 82 (1065)
Q Consensus 4 ~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~-~~~~ 82 (1065)
..+++++..++... +|+|+|++|++||+++|+|||||||||||++|||+..++ +|+|.++|.++++..+ +|.+
T Consensus 4 i~l~~v~K~yg~~~---~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~i 77 (338)
T COG3839 4 LELKNVRKSFGSFE---VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGI 77 (338)
T ss_pred EEEeeeEEEcCCce---eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCE
Confidence 34566666665432 899999999999999999999999999999999999876 9999999999988654 5889
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
++|+|+..++|++||+|||.|+++.++.. +.+.+.+|+++.+.|+|
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l 123 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGL 123 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCC
Confidence 99999999999999999999998765421 12234569999999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++..|+. +++|||||||||||||||+.+|++++||||+|.||+..+..+...|+++.+.. ++|++.+|||..|+
T Consensus 124 ~~lL~r~-----P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l-~~T~IYVTHDq~EA 197 (338)
T COG3839 124 EHLLNRK-----PLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERL-GTTTIYVTHDQVEA 197 (338)
T ss_pred hhHHhcC-----cccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhc-CCcEEEEcCCHHHH
Confidence 9988765 45799999999999999999999999999999999999999999999987665 56666799999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQ 288 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~ 288 (1065)
..++|||++|++|++...|++.++. ..|.+.-.|.|+-
T Consensus 198 mtladri~Vm~~G~i~Q~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 198 MTLADRIVVMNDGRIQQVGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred HhhCCEEEEEeCCeeeecCChHHHh--------hCccchhhhhhcC
Confidence 9999999999999999999999984 4566655565543
No 58
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-44 Score=356.40 Aligned_cols=210 Identities=28% Similarity=0.393 Sum_probs=180.9
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIH 784 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~~~ 784 (1065)
+++++|+|||++|++||++||+|||||||||||++|.|... +.+|+|.+||.++.. +.+++.+||++|++.+
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 57899999999999999999999999999999999999776 568999999976532 3467789999999999
Q ss_pred CCCCCHHHHHHHHhhccCC-----CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 785 SPGLTVLESLLFSAWLRLP-----SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 785 ~~~ltv~e~l~~~~~~~~~-----~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
.+.++|.+|+..+..-+.+ -....++.+..+-++++.+|+.+.+..+. ..|||||+|||+|||||+.+|+
T Consensus 93 v~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra-----~~LSGGQQQRVaIARaL~Q~pk 167 (258)
T COG3638 93 VPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA-----STLSGGQQQRVAIARALVQQPK 167 (258)
T ss_pred ccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh-----ccCCcchhHHHHHHHHHhcCCC
Confidence 9999999999876432221 12233455566788999999988877665 4799999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCCch
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKS 929 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~~~ 929 (1065)
|++.|||+++|||.++..||+.|+++++ .|.|||++.|+.+. ..++|||++-|+ .|+++|+||..+..
T Consensus 168 iILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~-~G~ivfDg~~~el~ 236 (258)
T COG3638 168 IILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK-AGRIVFDGPASELT 236 (258)
T ss_pred EEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec-CCcEEEeCChhhhh
Confidence 9999999999999999999999999975 49999999999885 678999999998 58999999986533
No 59
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-44 Score=367.81 Aligned_cols=217 Identities=29% Similarity=0.418 Sum_probs=185.4
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCc---cCCCC-CCCceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGH---GFKEF-VPPRTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~---~~~~~-~~~~~~ 82 (1065)
++++... ....+++|||++|+.||+++++|||||||||||++|+|+..|+ .|.|.+||+ +.+.. ...|+|
T Consensus 6 ~~~~~~~---~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~V 79 (345)
T COG1118 6 NNVKKRF---GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKV 79 (345)
T ss_pred hhhhhhc---ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcce
Confidence 4444443 3456899999999999999999999999999999999999887 999999999 55543 234789
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|||+|+..+|+++||.|||.|+.+++.. +. +....+.+++++|+.+.|
T Consensus 80 GfvFQ~YALF~HmtVa~NIAFGl~~~~~--~p------------------------------~~~~~r~rv~elL~lvqL 127 (345)
T COG1118 80 GFVFQHYALFPHMTVADNIAFGLKVRKE--RP------------------------------SEAEIRARVEELLRLVQL 127 (345)
T ss_pred eEEEechhhcccchHHhhhhhccccccc--CC------------------------------ChhhHHHHHHHHHHHhcc
Confidence 9999999999999999999999876511 10 112234568999999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++..+ +++.+|||||||||+|||||+..|+||+||||+++||++.+.++-++|+++....+.++ +.+|||.+|+
T Consensus 128 ~~la~-----ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~tt-vfVTHD~eea 201 (345)
T COG1118 128 EGLAD-----RYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTT-VFVTHDQEEA 201 (345)
T ss_pred cchhh-----cCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceE-EEEeCCHHHH
Confidence 88765 55678999999999999999999999999999999999999999999999877655555 4589999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++||||++|++|+|...||+.++.
T Consensus 202 ~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 202 LELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HhhcceEEEecCCeeeeeCCHHHHh
Confidence 9999999999999999999999884
No 60
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.2e-43 Score=357.77 Aligned_cols=193 Identities=30% Similarity=0.460 Sum_probs=167.9
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHS 785 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~~~ 785 (1065)
..+|++||++|++||++||||||||||||||++|.|... +++|.|.++|.++.. ..+++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~--pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDK--PTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 689999999999999999999999999999999999887 578999999977542 12456799999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcccc-CcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeec
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSG-ALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 864 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~-~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lD 864 (1065)
|++||+||+.+...+.... .....+.++++++.+||.+..+ .. +.+|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 9999999999876554322 2245667889999999986665 33 3589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 865 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 865 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
|||.+||+.+...|++++++++++ |+|||++|||+ ++...|||++.|.+ |+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~d-G~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKD-GK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeC-Ce
Confidence 999999999999999999999765 99999999996 47789999999986 55
No 61
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-43 Score=365.26 Aligned_cols=209 Identities=29% Similarity=0.424 Sum_probs=187.7
Q ss_pred ccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc---cCCc-ccccceEEEEcCCCC
Q 001507 708 VLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY---PKRQ-ETFARISGYCEQNDI 783 (1065)
Q Consensus 708 ~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~~~v~q~~~ 783 (1065)
+..+...+++|||+.|+.||++|++|||||||||||++|+|+.. +..|.|.+||. +.+. ....|.+|||+|+..
T Consensus 10 ~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YA 87 (345)
T COG1118 10 KRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYA 87 (345)
T ss_pred hhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechh
Confidence 34456778999999999999999999999999999999999988 67999999998 5443 345678999999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+|++|||.+|+.|+.+.+ ....+..+.+.+++++|+.+.|.++++... .+|||||||||++||||+.+|++|+|
T Consensus 88 LF~HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----~QLSGGQrQRVALARALA~eP~vLLL 161 (345)
T COG1118 88 LFPHMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYP-----AQLSGGQRQRVALARALAVEPKVLLL 161 (345)
T ss_pred hcccchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCc-----hhcChHHHHHHHHHHHhhcCCCeEee
Confidence 999999999999998776 334456777889999999999999998764 58999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|||+++||..-+..+...|+++.++ |.|++++|||+. ++++.+|||++|++ |+|+..||+.
T Consensus 162 DEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 162 DEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred cCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 9999999999999999999999876 999999999987 89999999999984 8999999874
No 62
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-44 Score=389.61 Aligned_cols=232 Identities=31% Similarity=0.430 Sum_probs=200.0
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC-CceEEE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAY 84 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~-~~~~~y 84 (1065)
+++++..++ ...+++|+|++|++||+++++|||||||||||++|+|+..|+ +|+|.++|+++....+ +|.+++
T Consensus 8 i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~ 81 (352)
T COG3842 8 IRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGM 81 (352)
T ss_pred EEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccce
Confidence 345555554 567999999999999999999999999999999999999886 9999999999988754 578999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
|+|+-.+||++||+||+.|+++.+.... +.+.+++++++|+.++|++
T Consensus 82 VFQ~YALFPHltV~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~ 128 (352)
T COG3842 82 VFQSYALFPHMTVEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEG 128 (352)
T ss_pred eecCcccCCCCcHHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchh
Confidence 9999999999999999999987432110 0123456999999999998
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..+. ++.+|||||||||+|||||+.+|+|||||||.|+||..-+.++...++++.++. +.|.|.+|||.+|+..
T Consensus 129 ~~~R-----~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~ 202 (352)
T COG3842 129 FADR-----KPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALA 202 (352)
T ss_pred hhhh-----ChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhh
Confidence 7765 456799999999999999999999999999999999999999999999998876 6666779999999999
Q ss_pred hcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHh
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEV 290 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~ 290 (1065)
++|||++|++|+|...|+++++ |..|.+.-.|+|+-+.
T Consensus 203 msDrI~Vm~~G~I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 203 MSDRIAVMNDGRIEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred hccceEEccCCceeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999999999999999998 4567766677776543
No 63
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-43 Score=360.06 Aligned_cols=200 Identities=24% Similarity=0.344 Sum_probs=173.3
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEcc
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQ 87 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q 87 (1065)
+++..++. ..+|+|||++|++||+++|+||||||||||||+|+|+..|. +|+|.++|.++ ..+.+.++||+|
T Consensus 8 ~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ 79 (248)
T COG1116 8 GVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQ 79 (248)
T ss_pred eeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEec
Confidence 44444433 67999999999999999999999999999999999999876 99999999887 345567999999
Q ss_pred ccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccccc
Q 001507 88 QDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCAD 167 (1065)
Q Consensus 88 ~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~ 167 (1065)
++.++|-.||+||+.|+....+... .+.+.+++++|+.+||.+..|
T Consensus 80 ~~~LlPW~Tv~~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~ 125 (248)
T COG1116 80 EDALLPWLTVLDNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED 125 (248)
T ss_pred cCcccchhhHHhhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh
Confidence 9999999999999999877653111 112235889999999998876
Q ss_pred ccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcc
Q 001507 168 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 247 (1065)
Q Consensus 168 t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D 247 (1065)
. ++++|||||||||+|||||+.+|+||+||||+++||+.|+.++.+.|.++.++ .+.||+.+||+.+|+..++|
T Consensus 126 ~-----~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~-~~~TvllVTHdi~EAv~Lsd 199 (248)
T COG1116 126 K-----YPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEE-TRKTVLLVTHDVDEAVYLAD 199 (248)
T ss_pred c-----CccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHh-hCCEEEEEeCCHHHHHhhhC
Confidence 5 45679999999999999999999999999999999999999999999988765 45777789999999999999
Q ss_pred cEEEecCC
Q 001507 248 DVILLSEG 255 (1065)
Q Consensus 248 ~v~~l~~G 255 (1065)
||++|+++
T Consensus 200 Rivvl~~~ 207 (248)
T COG1116 200 RVVVLSNR 207 (248)
T ss_pred EEEEecCC
Confidence 99999983
No 64
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-43 Score=342.21 Aligned_cols=201 Identities=27% Similarity=0.379 Sum_probs=183.2
Q ss_pred eEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC--cccccceEEEEcCCCCCCCCCCHH
Q 001507 714 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR--QETFARISGYCEQNDIHSPGLTVL 791 (1065)
Q Consensus 714 ~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~--~~~~~~~~~~v~q~~~~~~~ltv~ 791 (1065)
++++||||+++.||++||+|||||||||+|++|+++.. |.+|.|++||.+.. +...++.+|.++.+..++..||++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 48999999999999999999999999999999999987 57999999998753 345788899999888899999999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCC
Q 001507 792 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 871 (1065)
Q Consensus 792 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD 871 (1065)
|||.|.+++... ...+.+++.+++.+.++|.++.|++++ ++|.|+||||+|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~~l---~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLNGL---SRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHhhh---hhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 999999987643 345667889999999999999999875 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 872 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 872 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
..+.+.+.+.++++.++|++||++||.++ ++...||+++++.+ |++++.|+..
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 99999999999999888999999999986 78889999999985 8999999863
No 65
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.7e-43 Score=351.24 Aligned_cols=212 Identities=25% Similarity=0.352 Sum_probs=181.7
Q ss_pred ccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCceEEEEcccc
Q 001507 16 RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD 89 (1065)
Q Consensus 16 ~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~~~~yv~Q~~ 89 (1065)
...+.|++|||++|++||+++|+|||||||||||+.|.|++.|+ +|+|.++|.++.... .++++|+++|+-
T Consensus 18 fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~g 94 (263)
T COG1127 18 FGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQG 94 (263)
T ss_pred cCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeecc
Confidence 34568999999999999999999999999999999999999887 999999999876542 346799999999
Q ss_pred ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccccccc
Q 001507 90 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 169 (1065)
Q Consensus 90 ~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~ 169 (1065)
.+|..+||+||+.|..+-+.. .|+. ..++.+..-|+..||...
T Consensus 95 ALFssltV~eNVafplre~~~-------------------lp~~--------------~i~~lv~~KL~~VGL~~~---- 137 (263)
T COG1127 95 ALFSSLTVFENVAFPLREHTK-------------------LPES--------------LIRELVLMKLELVGLRGA---- 137 (263)
T ss_pred ccccccchhHhhheehHhhcc-------------------CCHH--------------HHHHHHHHHHHhcCCChh----
Confidence 999999999999997653211 1111 123346667888999865
Q ss_pred ccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccE
Q 001507 170 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 249 (1065)
Q Consensus 170 vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v 249 (1065)
+.+.++..||||++||++||||++.+|+++++||||+||||.++..+-++++++.+.. +.|++++||+.++++..||++
T Consensus 138 ~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~l-g~T~i~VTHDl~s~~~i~Drv 216 (263)
T COG1127 138 AADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDAL-GLTVIMVTHDLDSLLTIADRV 216 (263)
T ss_pred hhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhh-CCEEEEEECChHHHHhhhceE
Confidence 2345566799999999999999999999999999999999999999999999998876 456666999999999999999
Q ss_pred EEecCCcEEEEcCcchHHH
Q 001507 250 ILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 250 ~~l~~G~i~~~G~~~~~~~ 268 (1065)
++|.+|+|+..|+++++.+
T Consensus 217 ~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 217 AVLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999864
No 66
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.3e-43 Score=368.69 Aligned_cols=219 Identities=32% Similarity=0.435 Sum_probs=185.9
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.++ ++.+|+|+||++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+.. ..+.++
T Consensus 6 ~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 6 ENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred EEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEE
Confidence 45666664 457999999999999999999999999999999999999876 999999999887653 457899
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD 163 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~ 163 (1065)
||||.+.....+||+|-+.++..-+. ..+. .. ..+.++.+++.|+.+|+.
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~--~~~~-------------~~---------------~~~D~~~v~~aL~~~~~~ 129 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHL--GLFG-------------RP---------------SKEDEEIVEEALELLGLE 129 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCccc--cccc-------------CC---------------CHhHHHHHHHHHHHhCcH
Confidence 99999887889999999988643210 0000 00 011123588999999999
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHH
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 243 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~ 243 (1065)
+.++..+. .|||||||||.|||||+++|+||+||||||+||...+.++++.+++++++ .+.||+++.||.+.+.
T Consensus 130 ~la~r~~~-----~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~-~~~tvv~vlHDlN~A~ 203 (258)
T COG1120 130 HLADRPVD-----ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNRE-KGLTVVMVLHDLNLAA 203 (258)
T ss_pred HHhcCccc-----ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHH
Confidence 99887664 59999999999999999999999999999999999999999999999875 4667777899999999
Q ss_pred hhcccEEEecCCcEEEEcCcchHH
Q 001507 244 ELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 244 ~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+||++++|++|+++.+|++++++
T Consensus 204 ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 204 RYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HhCCEEEEEECCeEEeecCcchhc
Confidence 999999999999999999998775
No 67
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.6e-43 Score=378.99 Aligned_cols=205 Identities=27% Similarity=0.378 Sum_probs=186.4
Q ss_pred ccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCC
Q 001507 710 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 710 ~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~l 788 (1065)
+++..+|+|+|++|++||+++|+|||||||||||++|+|+.. +.+|+|.|+|.+++. ....|.+|+|+|+..++|+|
T Consensus 13 yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhm 90 (338)
T COG3839 13 FGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHM 90 (338)
T ss_pred cCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeCCccccCCC
Confidence 444449999999999999999999999999999999999987 679999999998876 45568899999999999999
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||+||+.|+.+++. .++++.+++|+++.+.|++.++.++.. ++|||||||||+|||||+++|++++||||.|
T Consensus 91 tV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlS 162 (338)
T COG3839 91 TVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQRQRVALARALVRKPKVFLLDEPLS 162 (338)
T ss_pred cHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhHHHHHHHHHHhcCCCEEEecCchh
Confidence 99999999987763 356777889999999999999999864 5899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+||...+..+...|+++.++ |.|+|.+|||.. |.+.++||+++|. +|++...|++.
T Consensus 163 nLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~p~ 219 (338)
T COG3839 163 NLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGTPL 219 (338)
T ss_pred HhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCChH
Confidence 99999999999999999765 899999999975 8889999999998 68999999874
No 68
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-43 Score=344.16 Aligned_cols=231 Identities=26% Similarity=0.413 Sum_probs=188.2
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCC--CCceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~--~~~~~G~i~~~g~~~~~~-----~~ 78 (1065)
+++++++++. +.+|+|||+.|+++++||+||||||||||||+++...... ....+|+|.++|+++.+. ..
T Consensus 10 ~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~l 86 (253)
T COG1117 10 VRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVEL 86 (253)
T ss_pred ecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHH
Confidence 5688888874 4699999999999999999999999999999999876443 346899999999987654 24
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++++|+|+|.|..|| +||+||+.|+.++++... + +.++.|+..|+
T Consensus 87 Rr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~--~--------------------------------~ldeiVe~sLk 131 (253)
T COG1117 87 RRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD--K--------------------------------ELDEIVESSLK 131 (253)
T ss_pred HHHheeeccCCCCCC-chHHHHHHHhHHhhccch--H--------------------------------HHHHHHHHHHH
Confidence 688999999999898 899999999988776432 1 11223555555
Q ss_pred HhCC-cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecC
Q 001507 159 ILGL-DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQ 237 (1065)
Q Consensus 159 ~lgL-~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~ 237 (1065)
.-.| ++.+|.+ ++...+|||||+||++|||||+-+|+|||||||||+|||.++..|-+++.++.+ .-||+++||
T Consensus 132 ~AaLWdEVKDrL--~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTH 206 (253)
T COG1117 132 KAALWDEVKDRL--HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTH 206 (253)
T ss_pred HhHhHHHhHHHh--hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeC
Confidence 5555 2233333 223457999999999999999999999999999999999999999999999864 457777999
Q ss_pred CchHHHhhcccEEEecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHH
Q 001507 238 PAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL 287 (1065)
Q Consensus 238 ~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l 287 (1065)
++..+.+..|+..++..|+++++|+.+++ |..|.++.+.||+
T Consensus 207 nmqQAaRvSD~taFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 207 NMQQAARVSDYTAFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred CHHHHHHHhHhhhhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 99999999999999999999999999887 3456666565554
No 69
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-43 Score=340.73 Aligned_cols=216 Identities=28% Similarity=0.344 Sum_probs=188.6
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--CCCceEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAY 84 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--~~~~~~~y 84 (1065)
++++..++. ..++++||||+++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+.... ..++.+|.
T Consensus 5 ~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGV 79 (245)
T COG4555 5 TDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGV 79 (245)
T ss_pred eehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcce
Confidence 344444443 456999999999999999999999999999999999999887 99999999886544 34688999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
++.+..++..+|++|||.|.+++.+.. ..+.+.+++++.+.|+|.+
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~ 125 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLE 125 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHH
Confidence 998888899999999999988765421 1233456899999999999
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
+.|+.+|+ +|-|+||||+|||||+.+|++++|||||||||..++..+.+.++++.. .+.+|+..+|.++|+..
T Consensus 126 ~~~rRv~~-----~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~Evea 198 (245)
T COG4555 126 YLDRRVGE-----FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEA 198 (245)
T ss_pred HHHHHHhh-----hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHH
Confidence 99998875 999999999999999999999999999999999999999999998754 36778889999999999
Q ss_pred hcccEEEecCCcEEEEcCcchHHH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
+||+|++|++|++++.|+.+++..
T Consensus 199 lCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 199 LCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred hhheEEEEecCcEEEcCCHHHHHH
Confidence 999999999999999999987754
No 70
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-43 Score=363.00 Aligned_cols=218 Identities=28% Similarity=0.440 Sum_probs=184.1
Q ss_pred HHHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEE
Q 001507 5 LLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAY 84 (1065)
Q Consensus 5 ~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~y 84 (1065)
.++++++.+++. ++|+||||++++|++++|+||||||||||+|+|+|++.|. +|+|.++|.+......+.+|||
T Consensus 6 ~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgY 79 (254)
T COG1121 6 EVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGY 79 (254)
T ss_pred EEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEE
Confidence 356778877643 4999999999999999999999999999999999999876 9999999988766655678999
Q ss_pred Eccc---cccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 85 VSQQ---DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 85 v~Q~---~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
|||. ||-|| .||+|.+..+..-+. .++... ..+..+.++++|+.+|
T Consensus 80 VPQ~~~~d~~fP-~tV~d~V~~g~~~~~--g~~~~~----------------------------~~~d~~~v~~aL~~Vg 128 (254)
T COG1121 80 VPQKSSVDRSFP-ITVKDVVLLGRYGKK--GWFRRL----------------------------NKKDKEKVDEALERVG 128 (254)
T ss_pred cCcccccCCCCC-cCHHHHHHccCcccc--cccccc----------------------------cHHHHHHHHHHHHHcC
Confidence 9994 56666 699999987632211 011100 0111345999999999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
+.+.+|..+|+ |||||+|||-|||||+++|++|+|||||+|+|+.++..++++|+++.++ +.||+++|||...
T Consensus 129 m~~~~~r~i~~-----LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~ 201 (254)
T COG1121 129 MEDLRDRQIGE-----LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGL 201 (254)
T ss_pred chhhhCCcccc-----cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHH
Confidence 99999988875 9999999999999999999999999999999999999999999999865 6778889999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+.++||+|+.|+ +++.+.|+++++.
T Consensus 202 v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 202 VMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred hHhhCCEEEEEc-CeeEeccChhhcc
Confidence 999999999995 6889999998774
No 71
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-43 Score=380.93 Aligned_cols=209 Identities=26% Similarity=0.383 Sum_probs=187.9
Q ss_pred cccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCC
Q 001507 707 GVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHS 785 (1065)
Q Consensus 707 ~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~ 785 (1065)
++.+++..+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|+++.. ...+|.+|+|+|+..+|
T Consensus 12 ~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALF 89 (352)
T COG3842 12 SKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDITDVPPEKRPIGMVFQSYALF 89 (352)
T ss_pred eeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhhcccceeecCcccC
Confidence 334567899999999999999999999999999999999999987 679999999999865 34578899999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
|+|||.||+.|+.+++. ....++.+++++++++.++|.+.+++.. .+|||||||||+|||||+.+|++|+|||
T Consensus 90 PHltV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQqQRVALARAL~~~P~vLLLDE 162 (352)
T COG3842 90 PHMTVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQQRVALARALVPEPKVLLLDE 162 (352)
T ss_pred CCCcHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHHHHHHHHHHhhcCcchhhhcC
Confidence 99999999999977432 3345667789999999999999888764 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|.|+||..-+..+...|+++.++ |.|.|++|||.+ +.+.++|||++|+ +|+++..|++.
T Consensus 163 PlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~-~G~I~Q~gtP~ 222 (352)
T COG3842 163 PLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMN-DGRIEQVGTPE 222 (352)
T ss_pred cccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEcc-CCceeecCCHH
Confidence 99999999999999999999755 999999999986 7889999999998 58999999874
No 72
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.8e-42 Score=379.00 Aligned_cols=220 Identities=32% Similarity=0.470 Sum_probs=189.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--CCCceEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAY 84 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--~~~~~~~y 84 (1065)
.+++..+++ .+.+|+||||++++|++++++||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||
T Consensus 8 ~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy 82 (293)
T COG1131 8 RNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGY 82 (293)
T ss_pred cceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEE
Confidence 344444432 357999999999999999999999999999999999999886 99999999887552 34578999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
++|++.+++.+||+|||.|.+.+++.... ..+++++++++.+||.+
T Consensus 83 ~~~~~~~~~~lT~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~ 128 (293)
T COG1131 83 VPQEPSLYPELTVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLED 128 (293)
T ss_pred EccCCCCCccccHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCch
Confidence 99999999999999999998887653210 11234899999999998
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..++. +++||+|||||++||+||+.+|+++||||||+|||+.++.++++.|++++++ +++||+++||..+++..
T Consensus 129 ~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~ 202 (293)
T COG1131 129 KANKK-----VRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEE 202 (293)
T ss_pred hhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHH
Confidence 54444 4579999999999999999999999999999999999999999999999875 44788889999999999
Q ss_pred hcccEEEecCCcEEEEcCcchHHHHHH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVLDFFA 271 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~~~f~ 271 (1065)
+||+|++|++|++++.|+.+++...+.
T Consensus 203 ~~d~v~il~~G~~~~~g~~~~l~~~~~ 229 (293)
T COG1131 203 LCDRVIILNDGKIIAEGTPEELKEKFG 229 (293)
T ss_pred hCCEEEEEeCCEEEEeCCHHHHHHhhc
Confidence 999999999999999999988776543
No 73
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.6e-42 Score=329.67 Aligned_cols=199 Identities=27% Similarity=0.363 Sum_probs=175.1
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~~~~~ 786 (1065)
+.+|+||||+|++||++-|+|||||||||||++|.+... ++.|+|.++|+++.. ..++|.+|+|+||..+.+
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~ 92 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLP 92 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecccccccccchhhheeeeEeeeccccc
Confidence 669999999999999999999999999999999999876 578999999998643 236789999999999999
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
..||+||+.|...... .+..+.+++|.++++..||.+.++... ..|||||||||+||||++.+|++|+.|||
T Consensus 93 ~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~lP-----~~LSGGEQQRvaIARAiV~~P~vLlADEP 164 (223)
T COG2884 93 DRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARALP-----SQLSGGEQQRVAIARAIVNQPAVLLADEP 164 (223)
T ss_pred cchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcCc-----cccCchHHHHHHHHHHHccCCCeEeecCC
Confidence 9999999999876653 345667788999999999998887653 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHh-cCeEEEEecCcEEEEeCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGP 924 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gg~~~~~g~ 924 (1065)
|.+|||..+..|++++.++.+.|.||++.|||.+ +... -.|++.|. .|+++....
T Consensus 165 TGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~--lv~~~~~rvl~l~-~Grl~~d~~ 220 (223)
T COG2884 165 TGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLE--LVNRMRHRVLALE-DGRLVRDES 220 (223)
T ss_pred CCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHH--HHHhccCcEEEEe-CCEEEeccc
Confidence 9999999999999999999989999999999954 4444 46788887 578887654
No 74
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-42 Score=336.86 Aligned_cols=206 Identities=26% Similarity=0.353 Sum_probs=178.9
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCC---CCCeeEEEEEECCccCCc-----ccccceEEEEcCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQND 782 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~---~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~ 782 (1065)
+++.+|+|||+.|++++++|++|||||||||||++|.+.. ++...+|+|.++|+++-. ..+|+.+|+|+|.|
T Consensus 18 g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkP 97 (253)
T COG1117 18 GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKP 97 (253)
T ss_pred CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCC
Confidence 5788999999999999999999999999999999999863 334578999999988643 35788999999999
Q ss_pred CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCce
Q 001507 783 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 861 (1065)
Q Consensus 783 ~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il 861 (1065)
.-|| +|++||+.|+.++....+ ++.++.|++.++...|++- .|++... ..+|||||+|||||||||+.+|+||
T Consensus 98 nPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a~~LSGGQQQRLcIARalAv~PeVl 171 (253)
T COG1117 98 NPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--ALGLSGGQQQRLCIARALAVKPEVL 171 (253)
T ss_pred CCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--ccCCChhHHHHHHHHHHHhcCCcEE
Confidence 9999 899999999988765433 6677889999999988754 4444322 3579999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 862 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 862 ~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+||||||+|||.+...|.++|.+|+ +.-|||++||.+. ...+..|+..++.. |+++++|+.
T Consensus 172 LmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~LvE~g~T 232 (253)
T COG1117 172 LMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GELVEFGPT 232 (253)
T ss_pred EecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cEEEEEcCH
Confidence 9999999999999999999999997 5799999999986 57788999999984 799999986
No 75
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-42 Score=344.95 Aligned_cols=225 Identities=25% Similarity=0.350 Sum_probs=186.4
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPR 80 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~ 80 (1065)
++++..++ ...++|+|||++|++||+++|+|||||||||||++|.|+..+. +|+|.+||.++.... .++
T Consensus 7 ~nl~k~yp--~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 7 KNLSKTYP--GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eeeeeecC--CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHH
Confidence 44544443 4467999999999999999999999999999999999988765 999999998876543 346
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.+||++|++.+.+.+||.+|+..+...+. +.+. ...+..+++ .+..+-+.|+.+
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~--s~~~---------slfglfsk~---------------dk~~Al~aLerv 135 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYT--STWR---------SLFGLFSKE---------------DKAQALDALERV 135 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccc--hHHH---------HHhCCCCHH---------------HHHHHHHHHHHc
Confidence 89999999999999999999998654221 1111 112222222 234477889999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+.+.+..+ +|||||+|||+|||||+.+|+|++-|||+++||+.+++++++.|++.+.+. +.|+++..|..+
T Consensus 136 gi~~~A~qra~-----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~-g~Tvi~nLH~vd 209 (258)
T COG3638 136 GILDKAYQRAS-----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQED-GITVIVNLHQVD 209 (258)
T ss_pred CcHHHHHHHhc-----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHc-CCEEEEEechHH
Confidence 99998877765 599999999999999999999999999999999999999999999998764 566666789999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchHHH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
.+.++||||+-|++|+++|.||++++-+
T Consensus 210 lA~~Y~~Riigl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 210 LAKKYADRIIGLKAGRIVFDGPASELTD 237 (258)
T ss_pred HHHHHHhhheEecCCcEEEeCChhhhhH
Confidence 9999999999999999999999988644
No 76
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.7e-41 Score=346.22 Aligned_cols=207 Identities=25% Similarity=0.389 Sum_probs=171.5
Q ss_pred Hhhhhc-CCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-------CC
Q 001507 8 QLRIYR-GNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PP 79 (1065)
Q Consensus 8 ~~~~~~-~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-------~~ 79 (1065)
+++..+ .+.....+|++||++|++||+++|+|||||||||||++|.|+..|+ +|.|.++|.++.... .+
T Consensus 6 ~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~ 82 (226)
T COG1136 6 NVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRR 82 (226)
T ss_pred eeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHH
Confidence 444433 2334478999999999999999999999999999999999999875 999999998876543 23
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.+|||+|+..++|++||+||+.+++.+.+.... .....++.+++.
T Consensus 83 ~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~ 128 (226)
T COG1136 83 KKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEV 128 (226)
T ss_pred HhEEEECccCCCCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHh
Confidence 5799999999999999999999987765432110 112347889999
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+||.+..+. .++..|||||||||||||||+.+|++++.||||.+||+.++..+++.+++++++ .++||+++||+.
T Consensus 129 lgl~~~~~~----~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd~ 203 (226)
T COG1136 129 LGLEDRLLK----KKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHDP 203 (226)
T ss_pred cCChhhhcc----CCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCCH
Confidence 999866541 234579999999999999999999999999999999999999999999999875 466777799985
Q ss_pred hHHHhhcccEEEecCCcE
Q 001507 240 PEAYELFDDVILLSEGQI 257 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i 257 (1065)
++...|||++.|.+|++
T Consensus 204 -~lA~~~dr~i~l~dG~~ 220 (226)
T COG1136 204 -ELAKYADRVIELKDGKI 220 (226)
T ss_pred -HHHHhCCEEEEEeCCee
Confidence 45669999999999994
No 77
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.4e-40 Score=367.74 Aligned_cols=203 Identities=29% Similarity=0.398 Sum_probs=178.5
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~l 788 (1065)
+++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.+++.+
T Consensus 18 ~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~ 95 (306)
T PRK13537 18 GDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDF 95 (306)
T ss_pred CCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEecccchHHHHhcEEEEeccCcCCCCC
Confidence 45679999999999999999999999999999999999877 568999999988643 23567899999999999999
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||+||+.|.+.++. ....+..++++++++.+++.+..++.+ ++||||||||++||+||+.+|++|||||||+
T Consensus 96 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~aL~~~P~lllLDEPt~ 167 (306)
T PRK13537 96 TVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGMKRRLTLARALVNDPDVLVLDEPTT 167 (306)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 99999998765542 223344456789999999988777765 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|+ +|++++.|++
T Consensus 168 gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~-~G~i~~~g~~ 222 (306)
T PRK13537 168 GLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIE-EGRKIAEGAP 222 (306)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999877999999999987 6778899999998 5899999985
No 78
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.6e-42 Score=331.38 Aligned_cols=213 Identities=22% Similarity=0.322 Sum_probs=188.1
Q ss_pred ccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCccc----ccceEEEEc
Q 001507 704 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQET----FARISGYCE 779 (1065)
Q Consensus 704 ~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~~~v~ 779 (1065)
.+..+.+++++++++||+.+++||++|++|||||||||.+.++.|... +.+|.|.+||.+++... .+.-+||+|
T Consensus 8 ~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLp 85 (243)
T COG1137 8 ENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLP 85 (243)
T ss_pred hhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCccccc
Confidence 445566788999999999999999999999999999999999999987 56999999999886532 233589999
Q ss_pred CCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 780 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 780 q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
|++..|-.+||+||++.....+.. +....+++++.+++++.+++.++++... ..||||||+|+.|||||+.+|+
T Consensus 86 QE~SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 86 QEASIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred ccchHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCC
Confidence 999999999999999876665532 2233456667889999999999998764 4799999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
.++||||++|+||-+...|.++++.|+++|..|++|-|... +....|||.+++.+ |++...|.+.
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 99999999999999999999999999999999999999987 78999999999985 8999999874
No 79
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7e-41 Score=322.14 Aligned_cols=211 Identities=25% Similarity=0.349 Sum_probs=183.9
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PP 79 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~ 79 (1065)
+++++..|.+. ..+|+||||.|++||++.|+||||||||||||+|.+...|+ .|+|.++|.++.... .+
T Consensus 4 f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LR 78 (223)
T COG2884 4 FENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLR 78 (223)
T ss_pred ehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhh
Confidence 45666666544 57999999999999999999999999999999999998876 999999999976542 36
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
|+||+|+|+..++++.||+||+.|+.+..+... .+.++++.++|+.
T Consensus 79 R~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~ 124 (223)
T COG2884 79 RQIGVVFQDFRLLPDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDL 124 (223)
T ss_pred heeeeEeeeccccccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHH
Confidence 899999999999999999999999887654321 1234568999999
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
.||.+.++.. +..|||||||||+||||++.+|++|+.||||-.||+..+.+|++.+.++.+ -||||++.+|+.
T Consensus 125 VgL~~k~~~l-----P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~ 197 (223)
T COG2884 125 VGLKHKARAL-----PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDL 197 (223)
T ss_pred hccchhhhcC-----ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccH
Confidence 9999987654 357999999999999999999999999999999999999999999999876 378888899999
Q ss_pred hHHHhhcccEEEecCCcEEEEcC
Q 001507 240 PEAYELFDDVILLSEGQIVYQGP 262 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~ 262 (1065)
+.+...-.+++.|++|+++....
T Consensus 198 ~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 198 ELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999987643
No 80
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-41 Score=340.23 Aligned_cols=219 Identities=26% Similarity=0.316 Sum_probs=185.0
Q ss_pred HHHhhhhcCCc-cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCc
Q 001507 6 LRQLRIYRGNR-SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPR 80 (1065)
Q Consensus 6 ~~~~~~~~~~~-~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~ 80 (1065)
++++.+.++.. ....+|+||||++.+||.++|+|+||||||||.++|+|+..|+ +|+|.++|.+..... ..+
T Consensus 6 v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 6 VRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred EeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhcc
Confidence 45666666543 2346999999999999999999999999999999999999876 999999998765542 457
Q ss_pred eEEEEcccc--ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 81 TSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 81 ~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
.+-+|+||| .+-|..||++.|.-+....+. .+.++++.++|+
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~------------------------------------~~~~~~i~~~L~ 126 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGL------------------------------------SKSQQRIAELLD 126 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCc------------------------------------cHHHHHHHHHHH
Confidence 799999998 477889999999766543221 112334888999
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||+...- ++++..|||||||||+|||||..+|++|+||||||+||+..+.+|++.|.++.+. .+.+.++++|+
T Consensus 127 ~VgL~~~~l----~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~-~~lt~l~IsHd 201 (252)
T COG1124 127 QVGLPPSFL----DRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKE-RGLTYLFISHD 201 (252)
T ss_pred HcCCCHHHH----hcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHh-cCceEEEEeCc
Confidence 999986432 3556789999999999999999999999999999999999999999999999875 46778889999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
...+..+||||+||++|++++.++.+++.+
T Consensus 202 l~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 202 LALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999998864
No 81
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.9e-40 Score=315.93 Aligned_cols=196 Identities=28% Similarity=0.366 Sum_probs=172.5
Q ss_pred eeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCCHHHHHHH
Q 001507 718 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLESLLF 796 (1065)
Q Consensus 718 ~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~ 796 (1065)
..+++|.+||++||+||||||||||||+++|... |.+|+|.|||.+.+. ....|-++.++|+..+|..+||.+|+.+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 4567889999999999999999999999999987 569999999998754 3456778999999999999999999987
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHH
Q 001507 797 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 876 (1065)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~ 876 (1065)
+.. |.-.-.++.+++++.++..+||.++.+++. .+|||||||||++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~---P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLS---PGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCC---cccccCHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 642 211122455677999999999999988875 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 877 IVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 877 ~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
++..++.++++ ++.|++++||+|+ +....+|+++++++ |+|.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999975 4899999999998 78899999999985 899999985
No 82
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=9.1e-40 Score=365.26 Aligned_cols=201 Identities=26% Similarity=0.324 Sum_probs=176.9
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc------cccceEEEEcCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSP 786 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~~~~~ 786 (1065)
+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+..+++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~ 95 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLS 95 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccc
Confidence 579999999999999999999999999999999999887 5689999999876431 23567999999999999
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+||+||+.|....+. ....+..+++.++++.+||.+..+... ..|||||||||+|||||+.+|++|+||||
T Consensus 96 ~~tv~eni~~~~~~~~---~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LSgGqkQRV~IARAL~~~P~iLLlDEP 167 (343)
T TIGR02314 96 SRTVFGNVALPLELDN---TPKDEIKRKVTELLALVGLGDKHDSYP-----SNLSGGQKQRVAIARALASNPKVLLCDEA 167 (343)
T ss_pred cCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 9999999998754331 234555677899999999988877654 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|+ +|+++..|+.
T Consensus 168 ts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~-~G~iv~~g~~ 225 (343)
T TIGR02314 168 TSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVIS-NGELIEQGTV 225 (343)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 9999999999999999999765 999999999986 5678899999998 5899999975
No 83
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-40 Score=371.16 Aligned_cols=203 Identities=26% Similarity=0.361 Sum_probs=179.1
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCCH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|++||
T Consensus 16 ~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 16 KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 4579999999999999999999999999999999999877 578999999987643 2235789999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+||+.|+...+. ....+..++++++++.++|.+..++.+ ..|||||||||+|||||+.+|++|+||||||+|
T Consensus 94 ~eNi~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvalARAL~~~P~llLLDEP~s~L 165 (356)
T PRK11650 94 RENMAYGLKIRG---MPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQRVAMGRAIVREPAVFLFDEPLSNL 165 (356)
T ss_pred HHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999999865431 234455577899999999988877754 589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 871 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|. +|+++..|++.
T Consensus 166 D~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~-~G~i~~~g~~~ 220 (356)
T PRK11650 166 DAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMN-GGVAEQIGTPV 220 (356)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEECCHH
Confidence 999999999999999765 999999999986 6888999999998 58999999863
No 84
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6.1e-40 Score=369.67 Aligned_cols=204 Identities=26% Similarity=0.388 Sum_probs=180.2
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~lt 789 (1065)
+++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|+++.. ...++.+|||+|+..++|++|
T Consensus 15 ~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~t 92 (353)
T TIGR03265 15 GAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLT 92 (353)
T ss_pred CCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCc
Confidence 34679999999999999999999999999999999999877 578999999987643 234577999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
|+||+.|+...+ ..+..+..++++++++.++|.++.++.. .+|||||||||+|||||+.+|++|+|||||++
T Consensus 93 v~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~ 164 (353)
T TIGR03265 93 VADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQQRVALARALATSPGLLLLDEPLSA 164 (353)
T ss_pred HHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 999999986543 2234556678899999999998887654 58999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 870 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|+ +|+++..|++.
T Consensus 165 LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~-~G~i~~~g~~~ 220 (353)
T TIGR03265 165 LDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMN-HGVIEQVGTPQ 220 (353)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 9999999999999999765 899999999986 6888999999998 58999999863
No 85
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-40 Score=368.44 Aligned_cols=204 Identities=25% Similarity=0.394 Sum_probs=180.0
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc-cccceEEEEcCCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~~~v~q~~~~~~~lt 789 (1065)
+++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.+||.++... ..++.+|||+|+..++|++|
T Consensus 17 ~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~t 94 (351)
T PRK11432 17 GSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMS 94 (351)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCC
Confidence 34679999999999999999999999999999999999987 5699999999876532 23577999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
|+||+.|+...+. ....+..++++++++.+++.++.++.. ..|||||||||+|||||+.+|++|+|||||++
T Consensus 95 v~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~ 166 (351)
T PRK11432 95 LGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQQRVALARALILKPKVLLFDEPLSN 166 (351)
T ss_pred HHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCccc
Confidence 9999999865432 234556678899999999988877654 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 870 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
||+.++..+.+.|+++.++ |.|+|++|||++ ++..++|++++|+ +|+++..|++.
T Consensus 167 LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~-~G~i~~~g~~~ 222 (351)
T PRK11432 167 LDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMN-KGKIMQIGSPQ 222 (351)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 9999999999999999765 899999999986 6888999999998 58999999863
No 86
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-40 Score=333.43 Aligned_cols=199 Identities=27% Similarity=0.366 Sum_probs=169.1
Q ss_pred eEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCCC--CCCC
Q 001507 714 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDI--HSPG 787 (1065)
Q Consensus 714 ~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~~--~~~~ 787 (1065)
.+|+||||+|.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.... .+.+.+.+|+||+. +.|.
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~ 98 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPR 98 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCcccCccccchhhccceeEEecCCccccCcc
Confidence 59999999999999999999999999999999999987 5699999999876443 46778999999974 6789
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.||++.|.-.... ....+. .+++.++++.+||.+- .++. +.+||||||||+||||||+.+|++|+||||
T Consensus 99 ~tv~~~l~Epl~~---~~~~~~--~~~i~~~L~~VgL~~~~l~R~-----P~eLSGGQ~QRiaIARAL~~~PklLIlDEp 168 (252)
T COG1124 99 RTVGRILSEPLRP---HGLSKS--QQRIAELLDQVGLPPSFLDRR-----PHELSGGQRQRIAIARALIPEPKLLILDEP 168 (252)
T ss_pred hhHHHHHhhhhcc---CCccHH--HHHHHHHHHHcCCCHHHHhcC-----chhcChhHHHHHHHHHHhccCCCEEEecCc
Confidence 9999988755432 122222 2338899999999653 3332 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
||+||+..+.+|+++|.++.++ +.|+|++|||.+ -+..+|||++||.+ |+++..++..
T Consensus 169 tSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ivE~~~~~ 227 (252)
T COG1124 169 TSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQIVEIGPTE 227 (252)
T ss_pred hhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-CeEEEeechh
Confidence 9999999999999999999754 889999999987 47788999999985 8999999863
No 87
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=375.49 Aligned_cols=217 Identities=27% Similarity=0.349 Sum_probs=183.6
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAY 84 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~y 84 (1065)
++++++.+. .++.+|+|+||++++||+++|+|||||||||||++|+|+..|+ +|+|.++|.++.... .++.++|
T Consensus 6 i~~l~~~~~--~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 6 LQAVRKSYD--GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEeEEEEeC--CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEE
Confidence 455555552 1246999999999999999999999999999999999998876 999999999876543 2468999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
|+|++.+||++||+||+.|+.+.++.. ..+...+++++++.+||.+
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~ 126 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMP----------------------------------KAEIEERVAEAARILELEP 126 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChh
Confidence 999999999999999999976432110 0011234788999999988
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..+..+ ++|||||||||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++. +++++++||+..++..
T Consensus 127 ~~~~~~-----~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~ 200 (356)
T PRK11650 127 LLDRKP-----RELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMT 200 (356)
T ss_pred HhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHH
Confidence 776554 5699999999999999999999999999999999999999999999987643 5677779999999999
Q ss_pred hcccEEEecCCcEEEEcCcchHH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|+|++|++|+++..|+++++.
T Consensus 201 l~D~i~vl~~G~i~~~g~~~~~~ 223 (356)
T PRK11650 201 LADRVVVMNGGVAEQIGTPVEVY 223 (356)
T ss_pred hCCEEEEEeCCEEEEECCHHHHH
Confidence 99999999999999999998874
No 88
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-39 Score=351.47 Aligned_cols=204 Identities=26% Similarity=0.375 Sum_probs=174.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIH 784 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~~~ 784 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~ 88 (235)
T cd03261 11 GGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGAL 88 (235)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccChhhHHHHhcceEEEccCccc
Confidence 34579999999999999999999999999999999999876 568999999987542 2345679999999999
Q ss_pred CCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeec
Q 001507 785 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 864 (1065)
Q Consensus 785 ~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lD 864 (1065)
++.+||+||+.+...... .....+..++++++++.+++.+..++.+ ..|||||||||+|||||+.+|+||+||
T Consensus 89 ~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llllD 161 (235)
T cd03261 89 FDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLYD 161 (235)
T ss_pred CCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEec
Confidence 999999999988643221 1233344566788999999987666544 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 865 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 865 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+|||+.++..+++.|++++++ |+|||++||+++ ++...+|++++|. +|++++.|+.
T Consensus 162 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 221 (235)
T cd03261 162 EPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLY-DGKIVAEGTP 221 (235)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEE-CCeEEEecCH
Confidence 999999999999999999999764 899999999986 5777899999998 5899988874
No 89
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-40 Score=344.42 Aligned_cols=201 Identities=26% Similarity=0.378 Sum_probs=179.0
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC----cccccceEEEEcCCCC-CCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR----QETFARISGYCEQNDI-HSPG 787 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~----~~~~~~~~~~v~q~~~-~~~~ 787 (1065)
..+|+|+|++|++||.++|+|+||||||||+++|+|..+ +.+|.|.++|.+.. ...+++.+|||+|++. .+..
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~ 94 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFG 94 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeeccchhhHHHhhcceEEEEECccccccc
Confidence 589999999999999999999999999999999999987 56899999998865 3567889999999974 3457
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
-||.|.+.|+.... ..+.++.+++++++++.+++.+.+++.. ..|||||||||+||.+|+.+|++|+|||||
T Consensus 95 ~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----~~LSGGqkqRvaIA~vLa~~P~iliLDEPt 166 (235)
T COG1122 95 PTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRPP-----FNLSGGQKQRVAIAGVLAMGPEILLLDEPT 166 (235)
T ss_pred CcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCCc-----cccCCcceeeHHhhHHHHcCCCEEEEcCCC
Confidence 79999999987543 3445567889999999999999977654 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+.++..+++.++++.++ |+|||++|||.+ .+...+|++++|+ +|+++++|++
T Consensus 167 a~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~-~G~i~~~g~p 223 (235)
T COG1122 167 AGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLD-DGKILADGDP 223 (235)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEE-CCEEeecCCH
Confidence 999999999999999999877 799999999987 5778899999998 5899999975
No 90
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.2e-40 Score=314.41 Aligned_cols=201 Identities=25% Similarity=0.358 Sum_probs=173.8
Q ss_pred CceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEEEccccccCCCCCHHHHHH
Q 001507 24 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRETLD 102 (1065)
Q Consensus 24 ~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~ 102 (1065)
..++.|+.||+++|+||||||||||||+|+|+..|. +|+|.+||.+.+... ..|-+++++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 478899999999999999999999999999999876 999999999977654 4578999999999999999999998
Q ss_pred HHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccccCchhh
Q 001507 103 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 182 (1065)
Q Consensus 103 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 182 (1065)
++..- +-+.+ ...+++++.++..+||..+.+.+.+ +|||||
T Consensus 94 LGl~P---~LkL~-------------------------------a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLSP---GLKLN-------------------------------AEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCCc---ccccC-------------------------------HHHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 86421 11100 1123458999999999998876654 599999
Q ss_pred hhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEEEEcC
Q 001507 183 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 262 (1065)
Q Consensus 183 kqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~ 262 (1065)
||||+|||+|+.+-+|++||||+|+||+.-+.+...++.+++.+. +.|+++++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~-~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDER-KMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999998764 5666678888899999999999999999999999
Q ss_pred cchHH
Q 001507 263 RVSVL 267 (1065)
Q Consensus 263 ~~~~~ 267 (1065)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 87764
No 91
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.4e-39 Score=364.88 Aligned_cols=204 Identities=26% Similarity=0.363 Sum_probs=178.2
Q ss_pred ccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCC
Q 001507 710 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 787 (1065)
Q Consensus 710 ~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~ 787 (1065)
++++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.
T Consensus 51 y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~ 128 (340)
T PRK13536 51 YGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVPVPARARLARARIGVVPQFDNLDLE 128 (340)
T ss_pred ECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEECCcchHHHhccEEEEeCCccCCCC
Confidence 345679999999999999999999999999999999999877 568999999988643 2346779999999999999
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
+||.||+.|.+.++. ....+..++++++++.++|.+..++.+ ++||||||||++||+||+.+|++|||||||
T Consensus 129 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~kqrv~lA~aL~~~P~lLiLDEPt 200 (340)
T PRK13536 129 FTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGMKRRLTLARALINDPQLLILDEPT 200 (340)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 999999987655432 122334456788999999988777765 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|+ +|++++.|++
T Consensus 201 ~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~-~G~i~~~g~~ 256 (340)
T PRK13536 201 TGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLE-AGRKIAEGRP 256 (340)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 999999999999999999877999999999987 6788999999998 4899999986
No 92
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1e-39 Score=357.26 Aligned_cols=186 Identities=22% Similarity=0.223 Sum_probs=140.0
Q ss_pred eEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHH
Q 001507 714 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLES 793 (1065)
Q Consensus 714 ~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~ 793 (1065)
+++.+++..+..-+..+++|+||+||||+++++.|... +..|-+.+.+ +.+++|-.|...-+..+.|.+-
T Consensus 378 ~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~--------r~ri~~f~Qhhvd~l~~~v~~v 447 (582)
T KOG0062|consen 378 QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP--------RLRIKYFAQHHVDFLDKNVNAV 447 (582)
T ss_pred hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc--------cceecchhHhhhhHHHHHhHHH
Confidence 67889999999999999999999999999999999665 4567776654 4568999998655444444432
Q ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHH
Q 001507 794 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 873 (1065)
Q Consensus 794 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~ 873 (1065)
.+....+ | ... ++.+++.+..+||..-.- ...+.+||||||-||++|.....+|.+|+|||||+.||..
T Consensus 448 -d~~~~~~-p-G~~----~ee~r~hl~~~Gl~g~la----~~si~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~d 516 (582)
T KOG0062|consen 448 -DFMEKSF-P-GKT----EEEIRRHLGSFGLSGELA----LQSIASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRD 516 (582)
T ss_pred -HHHHHhC-C-CCC----HHHHHHHHHhcCCCchhh----hccccccCCcchhHHHHHHHhcCCCcEEEecCCCccccHH
Confidence 2222222 1 112 233567778888864221 1124689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 001507 874 AAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 924 (1065)
Q Consensus 874 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 924 (1065)
+-..+-+.|+.+ +..||++||+.+ -+-..|+.+.+..+|...-+.|.
T Consensus 517 sl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 517 SLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred HHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeeecc
Confidence 999999999875 567999999976 36677999999986443334443
No 93
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.2e-39 Score=367.68 Aligned_cols=204 Identities=27% Similarity=0.343 Sum_probs=179.3
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeE--EEEEECCccCCc-ccccceEEEEcCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIE--GDIYISGYPKRQ-ETFARISGYCEQNDIHSPG 787 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~--G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~ 787 (1065)
+++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+ |+|.++|.++.. ...++.+|||+|++.++|.
T Consensus 16 ~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~ 93 (362)
T TIGR03258 16 GANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPH 93 (362)
T ss_pred CCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCEECCCCCHHHCCEEEEECCcccCCC
Confidence 34579999999999999999999999999999999999877 467 999999987643 2245679999999999999
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
+||+||+.|+...+ .....+..++++++++.++|.+..++.+ .+|||||||||+|||||+.+|++|+|||||
T Consensus 94 ~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvaLARAL~~~P~llLLDEP~ 165 (362)
T TIGR03258 94 LKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGGMQQRIAIARAIAIEPDVLLLDEPL 165 (362)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 99999999986543 2334555667899999999998887764 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC--CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNT--GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+|||+..+..+.+.|+++.++ |.|+|++|||++ ++...+|++++|+ +|+++..|++.
T Consensus 166 s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~-~G~i~~~g~~~ 224 (362)
T TIGR03258 166 SALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMK-DGRLAAHGEPQ 224 (362)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 999999999999999999866 799999999986 6788999999998 58999999863
No 94
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=371.86 Aligned_cols=216 Identities=24% Similarity=0.368 Sum_probs=184.1
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC-CceEEE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAY 84 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~-~~~~~y 84 (1065)
++++++.++ +..+|+|+|+++++||+++|+|||||||||||++|+|++.|+ +|+|.++|.++..... ++.++|
T Consensus 9 ~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~ 82 (351)
T PRK11432 9 LKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICM 82 (351)
T ss_pred EEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEE
Confidence 455655554 246899999999999999999999999999999999999876 9999999998765433 478999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
|+|++.+||++||+||+.|+.+.++... .+.+++++++++.+||.+
T Consensus 83 vfQ~~~lfp~~tv~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~ 128 (351)
T PRK11432 83 VFQSYALFPHMSLGENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAG 128 (351)
T ss_pred EeCCcccCCCCCHHHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCch
Confidence 9999999999999999999865332100 011234788999999988
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..+.. ++.|||||||||+|||||+.+|++|||||||++||+.++.++.+.|+++.++. ++++++++|+.+++..
T Consensus 129 ~~~r~-----~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~ 202 (351)
T PRK11432 129 FEDRY-----VDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFA 202 (351)
T ss_pred hhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHH
Confidence 76654 45699999999999999999999999999999999999999999999987643 5667779999999999
Q ss_pred hcccEEEecCCcEEEEcCcchHH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|+|++|++|+++..|+++++.
T Consensus 203 laD~i~vm~~G~i~~~g~~~~~~ 225 (351)
T PRK11432 203 VSDTVIVMNKGKIMQIGSPQELY 225 (351)
T ss_pred hCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999998874
No 95
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4e-40 Score=368.18 Aligned_cols=219 Identities=21% Similarity=0.326 Sum_probs=183.9
Q ss_pred HHHhhhhcCCc-cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------C
Q 001507 6 LRQLRIYRGNR-SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------P 78 (1065)
Q Consensus 6 ~~~~~~~~~~~-~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~ 78 (1065)
++++++.++.. ....+|+||||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .
T Consensus 4 ~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 4 LSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred EEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHH
Confidence 34566555422 2357999999999999999999999999999999999999876 999999999876532 2
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|+..+++..||+||+.|+....+... .+...++.++++
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~ 126 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLA 126 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHH
Confidence 4679999999999999999999998754321100 011234788999
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||.+..|..+ ..|||||||||+|||||+.+|++|+|||||||||+.++..+++.|+++.++. +.||++++|+
T Consensus 127 ~vgL~~~~~~~~-----~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~ 200 (343)
T TIGR02314 127 LVGLGDKHDSYP-----SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHE 200 (343)
T ss_pred HcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCC
Confidence 999998776554 5699999999999999999999999999999999999999999999987643 5667779999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+.+.++||+|++|++|++++.|+++++.
T Consensus 201 ~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 201 MDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999988764
No 96
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=347.56 Aligned_cols=216 Identities=27% Similarity=0.374 Sum_probs=185.8
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCC----CCCCCceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFK----EFVPPRTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~----~~~~~~~~ 82 (1065)
+++.+.+++. ..+|+|+|+++++|+.++|+|+||||||||+++|+|++.|. +|.|.++|.+.. ....++.+
T Consensus 7 ~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 7 ENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred EEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcce
Confidence 4455555444 67999999999999999999999999999999999999886 899999998865 22456889
Q ss_pred EEEcccc-ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 83 AYVSQQD-WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 83 ~yv~Q~~-~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
|||+|+| .++...||.|.+.|+..+.+... .+.+.+++++++.+|
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vg 127 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVG 127 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcC
Confidence 9999996 45677899999999877654321 112456899999999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+.++.. +..|||||||||+||.+|+.+|++++|||||||||+..+.++++.++++... ++.|||+++|+.+.
T Consensus 128 l~~~~~r~-----p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~ 201 (235)
T COG1122 128 LEELLDRP-----PFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLEL 201 (235)
T ss_pred chhhccCC-----ccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHH
Confidence 99887654 5679999999999999999999999999999999999999999999999764 46778889999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+..++|++++|++|+++++|++.++.
T Consensus 202 ~~~~ad~v~vl~~G~i~~~g~p~~i~ 227 (235)
T COG1122 202 VLEYADRVVVLDDGKILADGDPAEIF 227 (235)
T ss_pred HHhhCCEEEEEECCEEeecCCHHHHh
Confidence 99999999999999999999987664
No 97
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.6e-39 Score=361.87 Aligned_cols=203 Identities=27% Similarity=0.378 Sum_probs=177.4
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~l 788 (1065)
+++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+
T Consensus 4 ~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 81 (302)
T TIGR01188 4 GDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDL 81 (302)
T ss_pred CCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCC
Confidence 45679999999999999999999999999999999999877 568999999987643 23456799999999999999
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||+||+.+.+.++. .......++++++++.+++.+..++.+ +.|||||||||+||+||+.+|++|||||||+
T Consensus 82 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 82 TGRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999998765542 223344556889999999988777654 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+.++..+++.|++++++|+|||++||+++ ++...||++++|. +|++++.|++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 208 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIID-HGRIIAEGTP 208 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999877999999999986 6778899999998 5899999875
No 98
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.8e-40 Score=371.30 Aligned_cols=216 Identities=25% Similarity=0.387 Sum_probs=183.6
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAY 84 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~y 84 (1065)
+++++..++ .+.+|+|+||++++||+++|+|||||||||||++|+|+..|+ +|+|.++|+++.... .+|.++|
T Consensus 7 ~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 7 IDNIRKRFG---AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred EEEEEEEeC---CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEE
Confidence 345555553 246899999999999999999999999999999999999876 999999999876543 3467999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
|+|++.+||++||+||+.|+...++.. ..+.+.+++++++.+||++
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~l~L~~ 126 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIAYGLKNRGMG----------------------------------RAEVAERVAELLDLVGLPG 126 (353)
T ss_pred EeCCcccCCCCcHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCCc
Confidence 999999999999999999976432110 0011234889999999998
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..|.. +.+|||||||||+|||||+.+|+++||||||++||..++.++.+.|+++.++. ++++++++|+.+++..
T Consensus 127 ~~~~~-----~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~ 200 (353)
T TIGR03265 127 SERKY-----PGQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALS 200 (353)
T ss_pred hhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHH
Confidence 77654 45699999999999999999999999999999999999999999999987643 5667779999999999
Q ss_pred hcccEEEecCCcEEEEcCcchHH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|+|++|++|++++.|+++++.
T Consensus 201 l~d~i~vl~~G~i~~~g~~~~~~ 223 (353)
T TIGR03265 201 MADRIVVMNHGVIEQVGTPQEIY 223 (353)
T ss_pred hCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999998874
No 99
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.5e-40 Score=370.26 Aligned_cols=216 Identities=25% Similarity=0.343 Sum_probs=183.6
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCcee--EEEEECCccCCCCC-CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVS--GKITYNGHGFKEFV-PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~--G~i~~~g~~~~~~~-~~~~~~ 83 (1065)
++++..+++ ..+|+|+|+++++||+++|+|||||||||||++|+|++.|+ + |+|.++|.++.... .++.++
T Consensus 9 ~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig 82 (362)
T TIGR03258 9 DHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLA 82 (362)
T ss_pred EEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEE
Confidence 445555432 46999999999999999999999999999999999999876 7 99999999875433 246799
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD 163 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~ 163 (1065)
||+|++.+++++||+||+.|+...++... .+.+.+++++++.+||+
T Consensus 83 ~vfQ~~~l~p~~tv~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~ 128 (362)
T TIGR03258 83 LLFQNYALFPHLKVEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLG 128 (362)
T ss_pred EEECCcccCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCC
Confidence 99999999999999999999865332100 01123478899999999
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHH
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 243 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~ 243 (1065)
+..|+.+ ++|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.++.+++|++++||+.+++.
T Consensus 129 ~~~~~~~-----~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~ 203 (362)
T TIGR03258 129 DAAAHLP-----AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDAL 203 (362)
T ss_pred chhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHH
Confidence 8777654 56999999999999999999999999999999999999999999999876533567778999999999
Q ss_pred hhcccEEEecCCcEEEEcCcchHH
Q 001507 244 ELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 244 ~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.++|+|++|++|+++..|+++++.
T Consensus 204 ~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 204 TLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999998874
No 100
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.6e-39 Score=363.34 Aligned_cols=205 Identities=23% Similarity=0.316 Sum_probs=179.4
Q ss_pred ccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---cc----cceEEEEcCCC
Q 001507 710 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---TF----ARISGYCEQND 782 (1065)
Q Consensus 710 ~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~~~v~q~~ 782 (1065)
++++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... .+ ++.+|||+|++
T Consensus 3 ~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 3 TGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred cCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 345679999999999999999999999999999999999987 5799999999886532 22 56899999999
Q ss_pred CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 783 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 783 ~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
.+++.+||+||+.|...+. ....++..+++.++++.++|.+..++.. ..|||||||||+|||||+.+|+|||
T Consensus 81 ~l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLL 152 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILL 152 (363)
T ss_pred cCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999976543 2334556677899999999987777654 5799999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|||||++||+.++..+++.++++.++ |+|||++||+++ ++...+|++++|. +|+++..|++.
T Consensus 153 lDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~-~G~iv~~g~~~ 215 (363)
T TIGR01186 153 MDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMK-AGEIVQVGTPD 215 (363)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEeeCCHH
Confidence 99999999999999999999999754 899999999986 5788899999998 58999999753
No 101
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=365.25 Aligned_cols=207 Identities=27% Similarity=0.391 Sum_probs=178.9
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~lt 789 (1065)
+++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|+++.. ...++.+|||+|++.++|.+|
T Consensus 13 ~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~t 90 (353)
T PRK10851 13 GRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMT 90 (353)
T ss_pred CCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHCCEEEEecCcccCCCCc
Confidence 34679999999999999999999999999999999999877 568999999987643 223467999999999999999
Q ss_pred HHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 790 VLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 790 v~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
|+||+.|....+.. .....++..++++++++.++|.+..++.+ ..|||||||||+|||||+.+|++|+|||||+
T Consensus 91 v~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~QRvalArAL~~~P~llLLDEP~s 165 (353)
T PRK10851 91 VFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQKQRVALARALAVEPQILLLDEPFG 165 (353)
T ss_pred HHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999997643211 12234455667899999999988777654 5899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|+ +|++++.|++.
T Consensus 166 ~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~-~G~i~~~g~~~ 222 (353)
T PRK10851 166 ALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMS-QGNIEQAGTPD 222 (353)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 99999999999999999765 899999999986 6888999999998 58999999763
No 102
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-40 Score=381.94 Aligned_cols=221 Identities=25% Similarity=0.410 Sum_probs=185.0
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC---CceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~---~~~~ 82 (1065)
+++++|.|+.+++.++|+|+||+|+|||++|||||||+||||+.++|..++.|. +|+|.+||+|+.+.++ ++.|
T Consensus 468 F~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~I 544 (716)
T KOG0058|consen 468 FEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKI 544 (716)
T ss_pred EEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHe
Confidence 578899999999999999999999999999999999999999999999999876 9999999999987754 6889
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|+|.|+|.+|.. ||+|||.|+... ...+.+.++++.. ...+. ..++
T Consensus 545 g~V~QEPvLFs~-sI~eNI~YG~~~----~t~e~i~~AAk~A--------------------------Nah~F---I~~~ 590 (716)
T KOG0058|consen 545 GLVGQEPVLFSG-SIRENIAYGLDN----ATDEEIEAAAKMA--------------------------NAHEF---ITNF 590 (716)
T ss_pred eeeeccceeecc-cHHHHHhcCCCC----CCHHHHHHHHHHh--------------------------ChHHH---HHhC
Confidence 999999998875 999999997541 1111111111100 00111 3468
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++.+||.||+++. .||||||||+||||||++||.||||||.||+||+++...+.+.|.+..+ +.||++|.|..+.+
T Consensus 591 p~gY~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~---~rTVlvIAHRLSTV 666 (716)
T KOG0058|consen 591 PDGYNTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ---GRTVLVIAHRLSTV 666 (716)
T ss_pred ccccccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc---CCeEEEEehhhhHh
Confidence 9999999999876 6999999999999999999999999999999999999999999987653 36666688887655
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
+.+|+|+++++|++++.|+++|+++
T Consensus 667 -~~Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 667 -RHADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred -hhccEEEEEcCCeEEecccHHHHhh
Confidence 5689999999999999999999875
No 103
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-40 Score=331.50 Aligned_cols=214 Identities=28% Similarity=0.381 Sum_probs=185.4
Q ss_pred ccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCccc----ccceEEEEc
Q 001507 704 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQET----FARISGYCE 779 (1065)
Q Consensus 704 ~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~~~v~ 779 (1065)
++.++.++...+++||||++++||++||+||||||||||+|+|+|..+ +.+|+|.++|++++... .+.-++..+
T Consensus 8 ~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTF 85 (250)
T COG0411 8 RGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTF 85 (250)
T ss_pred ccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeec
Confidence 344455677889999999999999999999999999999999999987 57899999999875422 344578899
Q ss_pred CCCCCCCCCCHHHHHHHHhhcc--------CCC-CCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHH
Q 001507 780 QNDIHSPGLTVLESLLFSAWLR--------LPS-EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTI 850 (1065)
Q Consensus 780 q~~~~~~~ltv~e~l~~~~~~~--------~~~-~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~i 850 (1065)
|...+|++|||.||+..++..+ .+. ....++..++..++++.+||.+.++...+ +||+||||||.|
T Consensus 86 Q~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEI 160 (250)
T COG0411 86 QITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEI 160 (250)
T ss_pred ccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHH
Confidence 9999999999999999875533 111 11234556778899999999999998764 799999999999
Q ss_pred HHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 851 AVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 851 a~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
||||+.+|++|+||||.+||.+.....+.+.|+++.++ |.||++|-||++ -++.+||||+||+. |+++.+|++.
T Consensus 161 ArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 161 ARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred HHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCHH
Confidence 99999999999999999999999999999999999874 799999999998 48899999999984 8999999874
No 104
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=8.1e-40 Score=363.54 Aligned_cols=216 Identities=28% Similarity=0.375 Sum_probs=183.1
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--CCCceEE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSA 83 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--~~~~~~~ 83 (1065)
++++++.++ +..+|+||||+|++||+++|+||||||||||+++|+|.+.|+ +|+|.++|.++... ..++.+|
T Consensus 10 i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig 83 (306)
T PRK13537 10 FRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVG 83 (306)
T ss_pred EEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEE
Confidence 345555553 356999999999999999999999999999999999999876 99999999987543 2346799
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD 163 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~ 163 (1065)
||+|++.+++.+||+||+.|.+..++... .+...+++++++.+||.
T Consensus 84 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~ 129 (306)
T PRK13537 84 VVPQFDNLDPDFTVRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLE 129 (306)
T ss_pred EEeccCcCCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCc
Confidence 99999999999999999987654432100 00122367889999999
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHH
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 243 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~ 243 (1065)
+.+++.++ +||||||||++||+||+.+|++++|||||+|||+.++..+++.|+++++ .+++|++++|+.+++.
T Consensus 130 ~~~~~~~~-----~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~ 202 (306)
T PRK13537 130 NKADAKVG-----ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAE 202 (306)
T ss_pred hHhcCchh-----hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHH
Confidence 88877664 6999999999999999999999999999999999999999999999864 3677888999999999
Q ss_pred hhcccEEEecCCcEEEEcCcchHHH
Q 001507 244 ELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 244 ~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
++||+|++|++|++++.|+++++..
T Consensus 203 ~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 203 RLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999988754
No 105
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.2e-39 Score=365.98 Aligned_cols=208 Identities=21% Similarity=0.284 Sum_probs=179.1
Q ss_pred ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC-------CceEEEEccccc
Q 001507 18 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 90 (1065)
Q Consensus 18 ~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~-------~~~~~yv~Q~~~ 90 (1065)
.+.+|+|+||+|++||+++|+|||||||||||++|+|++.|. +|+|.++|.++..... ++.++||+|+++
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 346899999999999999999999999999999999999875 9999999998765432 467999999999
Q ss_pred cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccc
Q 001507 91 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 170 (1065)
Q Consensus 91 ~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~v 170 (1065)
+++++||+||+.|+....+... .+..+++.++++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh
Confidence 9999999999998755332100 011234788999999987766554
Q ss_pred cCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEE
Q 001507 171 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 250 (1065)
Q Consensus 171 g~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~ 250 (1065)
..|||||||||+|||||+.+|+|+||||||+|||+.++.++.+.++++.+. .++||++++|+.+++..+||+|+
T Consensus 128 -----~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~-~~~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 -----DELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQAT-LQKTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred -----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 469999999999999999999999999999999999999999999988654 35677779999999999999999
Q ss_pred EecCCcEEEEcCcchHHH
Q 001507 251 LLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 251 ~l~~G~i~~~G~~~~~~~ 268 (1065)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999888753
No 106
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-39 Score=342.52 Aligned_cols=200 Identities=31% Similarity=0.433 Sum_probs=170.2
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCCH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|+
T Consensus 12 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 12 SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 4579999999999999999999999999999999999876 568999999987643 2234679999999988889999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+||+.+...... .......+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~L 161 (213)
T cd03259 90 AENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSAL 161 (213)
T ss_pred HHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999987643321 123334456788999999987766543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 871 DARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
|+.++..+++.|+++++ .|+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 162 D~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 162 DAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999976 4899999999986 56788999999985 7887654
No 107
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.1e-39 Score=365.39 Aligned_cols=213 Identities=23% Similarity=0.341 Sum_probs=184.4
Q ss_pred EEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 001507 688 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR 767 (1065)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~ 767 (1065)
++++|++..+ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 15 L~l~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~ 79 (375)
T PRK09452 15 VELRGISKSF-------------DGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDIT 79 (375)
T ss_pred EEEEEEEEEE-------------CCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5666666544 34579999999999999999999999999999999999887 56899999998764
Q ss_pred c-ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHH
Q 001507 768 Q-ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRK 846 (1065)
Q Consensus 768 ~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 846 (1065)
. ...++.+|||+|++.++|.+||+||+.|+...+. ....+..++++++++.+++.+..++.+ ..|||||||
T Consensus 80 ~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~Q 151 (375)
T PRK09452 80 HVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQK---TPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQQ 151 (375)
T ss_pred CCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHH
Confidence 3 2235679999999999999999999999764331 234445567899999999998887754 589999999
Q ss_pred HHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 847 RLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 847 r~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+|||||+.+|++|+|||||++||..++..+.+.|+++.++ |.|+|++|||+. ++...+|++++|. +|+++..|++
T Consensus 152 RVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~-~G~i~~~g~~ 229 (375)
T PRK09452 152 RVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMR-DGRIEQDGTP 229 (375)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 999999999999999999999999999999999999999765 999999999986 6888999999998 5899999976
No 108
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-40 Score=331.51 Aligned_cols=228 Identities=23% Similarity=0.354 Sum_probs=190.7
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCC----ceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~----~~~ 82 (1065)
++++..++ ...+++||||++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...+. .-+
T Consensus 8 ~~l~k~FG---Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 8 RGLSKRFG---GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred ccceeecC---CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccc
Confidence 44444443 467999999999999999999999999999999999999886 99999999998876543 457
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+..+|...+|+++||.||+..+...+.. +.... ..... .....+..+++.++|+.+||
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~---~~~~l---------~~~~~----------~~~e~~~~e~A~~~Le~vgL 139 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLG---LSGLL---------GRPRA----------RKEEREARERARELLEFVGL 139 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhh---hhhhh---------ccccc----------hhhHHHHHHHHHHHHHHcCC
Confidence 8999999999999999999988654321 00000 00000 00112234568899999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
.+.+|+..|+ ||+|||||+.|||||+.+|++|+||||.+||.+....++.+.++++.+. ++.+|+++-|+++.+
T Consensus 140 ~~~a~~~A~~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~-~g~tillIEHdM~~V 213 (250)
T COG0411 140 GELADRPAGN-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDR-GGVTILLIEHDMKLV 213 (250)
T ss_pred chhhcchhhc-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhc-CCcEEEEEEeccHHH
Confidence 9999998875 9999999999999999999999999999999999999999999999763 568888899999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
+.+||||+||+.|+++.+|+++++.+
T Consensus 214 m~l~dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 214 MGLADRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred hhhccEEEeccCCcCcccCCHHHHhc
Confidence 99999999999999999999998863
No 109
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-40 Score=322.62 Aligned_cols=217 Identities=19% Similarity=0.328 Sum_probs=185.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCC----ceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~----~~~ 82 (1065)
+++...++ ++++++|||+.+++||+++++|||||||||.+.++.|+..|+ +|+|.+||.+++..... .-+
T Consensus 8 ~~l~K~y~---kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGi 81 (243)
T COG1137 8 ENLAKSYK---KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGI 81 (243)
T ss_pred hhhhHhhC---CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCc
Confidence 44555543 356999999999999999999999999999999999999887 99999999999877543 358
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
||+||++..|-.+||+|||.-..+.+....+ ..+.+.+.+.+|+.|+|
T Consensus 82 gYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~--------------------------------~~~~~~~l~~LL~ef~i 129 (243)
T COG1137 82 GYLPQEASIFRKLTVEDNIMAVLEIREKDLK--------------------------------KAERKEELDALLEEFHI 129 (243)
T ss_pred ccccccchHhhcCcHHHHHHHHHhhhhcchh--------------------------------HHHHHHHHHHHHHHhch
Confidence 9999999999999999999876654321100 00112347899999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
.|.++..- .+||||||||+.|||||+.+|+.++||||++|+||.+..+|.+.++.+.. .+.-|+++-|+..|.
T Consensus 130 ~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREt 202 (243)
T COG1137 130 THLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRET 202 (243)
T ss_pred HHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHH
Confidence 99988754 36999999999999999999999999999999999999999999999875 366677788999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
..+|||.+++++|++..+|+++++.+
T Consensus 203 L~i~dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 203 LDICDRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred HhhhheEEEEecCeEEecCCHHHHhc
Confidence 99999999999999999999988863
No 110
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-39 Score=341.23 Aligned_cols=200 Identities=28% Similarity=0.427 Sum_probs=172.2
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHH
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 792 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 792 (1065)
+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 579999999999999999999999999999999999876 468999999987642 3567999999998888899999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCH
Q 001507 793 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 872 (1065)
Q Consensus 793 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~ 872 (1065)
|+.+....+. .......+.++++++.+++.+..+... ..||||||||++|||||+.+|++|||||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988654331 222334566889999999987666543 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEec-CcEEEEeCCC
Q 001507 873 RAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 925 (1065)
Q Consensus 873 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~-gg~~~~~g~~ 925 (1065)
.++..+.+.|+++.+ .|+|||++||+++ ++...+|++++|.+ +|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999986 56788999999985 4899888764
No 111
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.3e-39 Score=340.93 Aligned_cols=194 Identities=25% Similarity=0.320 Sum_probs=166.6
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc------cccceEEEEcCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSP 786 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~~~~~ 786 (1065)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... .+++.++|++|++.+++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 469999999999999999999999999999999999876 5689999999875321 24567999999999999
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+||+||+.+....+. .......++++++++.+++.+..+... ..||||||||++|||||+.+|++||||||
T Consensus 94 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP 165 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLSGGEQQRVAIARAIVHKPPLLLADEP 165 (216)
T ss_pred cccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999998754331 122334566889999999987766544 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
|+|||+.++..+.+.|++++++|+|||++||+++ .+...+|++++|.+ |+
T Consensus 166 t~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 166 TGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999986 56678999999985 55
No 112
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=326.50 Aligned_cols=216 Identities=25% Similarity=0.387 Sum_probs=179.2
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC----Cce
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRT 81 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~----~~~ 81 (1065)
+++++.+|++ .++|++|||++++||+++|+|+||+||||||++|+|..++. +|+|.++|++++...+ ++-
T Consensus 6 v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 6 VENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred EEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCC
Confidence 4566777654 57999999999999999999999999999999999999775 9999999999987654 356
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
++||||....|+.+||+|||..++........ . +..++++.+.|=
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~-~----------------------------------~~~~e~v~~lFP 124 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEA-Q----------------------------------ERDLEEVYELFP 124 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccc-c----------------------------------cccHHHHHHHCh
Confidence 89999999999999999999987543211000 0 000334444432
Q ss_pred -CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 162 -LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 162 -L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
|.+..++.-| +|||||||-++|||||+++|++|+|||||.||-|.-..+|++.++++.+. ++.||+.+.|+..
T Consensus 125 ~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~ 198 (237)
T COG0410 125 RLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNAR 198 (237)
T ss_pred hHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHH
Confidence 4444455444 59999999999999999999999999999999999999999999999865 4578888999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchHHH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
.+.+++||.++|.+|+++++|+.+++..
T Consensus 199 ~Al~iaDr~yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 199 FALEIADRGYVLENGRIVLSGTAAELLA 226 (237)
T ss_pred HHHHhhCEEEEEeCCEEEEecCHHHHhc
Confidence 9999999999999999999999988753
No 113
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.2e-39 Score=368.68 Aligned_cols=215 Identities=26% Similarity=0.345 Sum_probs=182.5
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYV 85 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~yv 85 (1065)
+++++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|++.|+ +|+|.++|.++.... .++.++||
T Consensus 18 ~~l~~~~~---~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v 91 (375)
T PRK09452 18 RGISKSFD---GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTV 91 (375)
T ss_pred EEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEE
Confidence 44555443 246899999999999999999999999999999999999876 999999999876543 24679999
Q ss_pred ccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccc
Q 001507 86 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 165 (1065)
Q Consensus 86 ~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 165 (1065)
+|++.+||++||+||+.|+.+.++... .+.+.+++++++.+||.+.
T Consensus 92 fQ~~~lfp~ltv~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~ 137 (375)
T PRK09452 92 FQSYALFPHMTVFENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEF 137 (375)
T ss_pred ecCcccCCCCCHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999754321100 0112347889999999887
Q ss_pred ccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhh
Q 001507 166 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 245 (1065)
Q Consensus 166 ~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~ 245 (1065)
.+..+ .+|||||||||+|||||+.+|++|||||||++||..++..+.+.|+++.++. +++++++||+..++..+
T Consensus 138 ~~~~p-----~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~l 211 (375)
T PRK09452 138 AQRKP-----HQLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTM 211 (375)
T ss_pred hhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHh
Confidence 76654 5699999999999999999999999999999999999999999999987653 56677799999999999
Q ss_pred cccEEEecCCcEEEEcCcchHH
Q 001507 246 FDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 246 ~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+|+|++|++|+++..|+++++.
T Consensus 212 aDri~vl~~G~i~~~g~~~~i~ 233 (375)
T PRK09452 212 SDRIVVMRDGRIEQDGTPREIY 233 (375)
T ss_pred CCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999998874
No 114
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-39 Score=341.34 Aligned_cols=203 Identities=28% Similarity=0.367 Sum_probs=173.7
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~l 788 (1065)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+
T Consensus 11 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (220)
T cd03265 11 GDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDEL 88 (220)
T ss_pred CCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCcChHHHhhcEEEecCCccccccC
Confidence 34679999999999999999999999999999999999876 568999999986532 23456799999999999999
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||+||+.+....+. ....+..++++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~la~al~~~p~llllDEPt~ 160 (220)
T cd03265 89 TGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRRRLEIARSLVHRPEVLFLDEPTI 160 (220)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999988754432 222334456789999999987666544 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|. +|+++..|++
T Consensus 161 ~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 216 (220)
T cd03265 161 GLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIID-HGRIIAEGTP 216 (220)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEeCCh
Confidence 99999999999999999876 899999999986 5777899999998 5799888764
No 115
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=6.6e-39 Score=357.18 Aligned_cols=203 Identities=27% Similarity=0.370 Sum_probs=174.8
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~l 788 (1065)
+++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+
T Consensus 15 ~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (303)
T TIGR01288 15 GDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEF 92 (303)
T ss_pred CCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcccHHHHhhcEEEEeccccCCcCC
Confidence 34679999999999999999999999999999999999876 568999999987632 23456799999999999999
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||+||+.+.+..+. .......++++++++.+++.+..++.+ ..||||||||++|||||+.+|++|||||||+
T Consensus 93 tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 164 (303)
T TIGR01288 93 TVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGMKRRLTLARALINDPQLLILDEPTT 164 (303)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999987554321 222333456778999999987776654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|. +|++++.|+.
T Consensus 165 gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 219 (303)
T TIGR01288 165 GLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLE-SGRKIAEGRP 219 (303)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 99999999999999999877999999999986 6778899999998 5899999875
No 116
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-39 Score=338.85 Aligned_cols=199 Identities=24% Similarity=0.443 Sum_probs=170.9
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 791 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~ 791 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..++.++|++|++.+++.+|++
T Consensus 12 ~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 12 RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 4579999999999999999999999999999999999876 568999999987643 3456799999999999999999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCC
Q 001507 792 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 871 (1065)
Q Consensus 792 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD 871 (1065)
||+.+....+. .......+.++++++.+++.+..+... ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 89 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD 160 (210)
T cd03269 89 DQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKVQFIAAVIHDPELLILDEPFSGLD 160 (210)
T ss_pred HHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCC
Confidence 99988654432 122334456788999999987666543 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 872 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 872 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 161 ~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 161 PVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 99999999999998777899999999986 56678999999984 7887654
No 117
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-39 Score=363.59 Aligned_cols=203 Identities=24% Similarity=0.350 Sum_probs=178.4
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCCH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|++||
T Consensus 31 ~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 31 GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 4579999999999999999999999999999999999987 568999999987643 2346789999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
.||+.|+...+. ....+..++++++++.+++.+..++.. .+|||||||||+|||||+.+|++|+|||||++|
T Consensus 109 ~eNi~~~l~~~~---~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~L 180 (377)
T PRK11607 109 EQNIAFGLKQDK---LPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQRQRVALARSLAKRPKLLLLDEPMGAL 180 (377)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999999765332 234555677899999999988877654 589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 871 DARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|...+..+.+.|+++.+ .|.|+|++|||++ ++..++|++++|. +|+++..|++.
T Consensus 181 D~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~-~G~i~~~g~~~ 235 (377)
T PRK11607 181 DKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMN-RGKFVQIGEPE 235 (377)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEe-CCEEEEEcCHH
Confidence 99999999999999865 4899999999986 6888999999998 58999999863
No 118
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-39 Score=323.73 Aligned_cols=209 Identities=27% Similarity=0.365 Sum_probs=174.0
Q ss_pred cccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcC
Q 001507 705 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQ 780 (1065)
Q Consensus 705 ~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q 780 (1065)
+....++..++|++|||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|++++. ...++-++||||
T Consensus 8 ~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit~~p~~~r~r~Gi~~VPe 85 (237)
T COG0410 8 NLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDITGLPPHERARLGIAYVPE 85 (237)
T ss_pred eEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecCCCCHHHHHhCCeEeCcc
Confidence 33445677899999999999999999999999999999999999887 458999999998754 234567999999
Q ss_pred CCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcC-CCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 781 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-LTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 781 ~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
....|+.|||+|||..++..+... ......++++.+.+- |.+..+.+. ..|||||||.++|||||+.+|+
T Consensus 86 gR~iF~~LTVeENL~~g~~~~~~~----~~~~~~~e~v~~lFP~Lker~~~~a-----G~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 86 GRRIFPRLTVEENLLLGAYARRDK----EAQERDLEEVYELFPRLKERRNQRA-----GTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred cccchhhCcHHHHHhhhhhccccc----ccccccHHHHHHHChhHHHHhcCcc-----cCCChHHHHHHHHHHHHhcCCC
Confidence 999999999999999876544221 111122566666653 444444443 3799999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+|+|||||.||-|.-..+|.+.|++++++ |.||+++-++.. ...+.+||.++|. .|++++.|+..
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle-~Griv~~G~~~ 222 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLE-NGRIVLSGTAA 222 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEe-CCEEEEecCHH
Confidence 99999999999999999999999999866 789999999876 4678899999998 58999999864
No 119
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-39 Score=363.64 Aligned_cols=204 Identities=27% Similarity=0.388 Sum_probs=177.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~lt 789 (1065)
+++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.+++.+|
T Consensus 14 ~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~t 91 (369)
T PRK11000 14 GDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLS 91 (369)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCC
Confidence 34679999999999999999999999999999999999877 568999999987643 223467999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
|+||+.|....+. ....+..++++++++.+++.+..++.+ ..|||||||||+|||||+.+|++|||||||+|
T Consensus 92 v~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~ 163 (369)
T PRK11000 92 VAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQRQRVAIGRTLVAEPSVFLLDEPLSN 163 (369)
T ss_pred HHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999998765432 233445567899999999988777654 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 870 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
||+.++..+.+.|+++.++ |.|||++|||++ ++...+|++++|. +|+++..|++.
T Consensus 164 LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~-~G~i~~~g~~~ 219 (369)
T PRK11000 164 LDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLD-AGRVAQVGKPL 219 (369)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 9999999999999999765 899999999986 6778899999998 58999998753
No 120
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.8e-39 Score=322.42 Aligned_cols=209 Identities=24% Similarity=0.368 Sum_probs=189.5
Q ss_pred ccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCC
Q 001507 704 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI 783 (1065)
Q Consensus 704 ~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~ 783 (1065)
.+.++.++++.+++|+||.++||+++|++|||||||||++++|.|... +++|+|.++|.+++.. .+.+|||.|.+-.
T Consensus 6 e~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERG 82 (300)
T COG4152 6 EGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERG 82 (300)
T ss_pred ecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhc
Confidence 344556788999999999999999999999999999999999999987 5799999999987643 3557999999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++.+||.|.|.|.|.++. .+.++.+..+..+|+.+++.....+.+ +.||.|++|++.+-.+++++|++++|
T Consensus 83 Ly~k~tv~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLlIL 154 (300)
T COG4152 83 LYPKMTVEDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELLIL 154 (300)
T ss_pred cCccCcHHHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEEEe
Confidence 9999999999999998874 456677778899999999998887765 58999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+|||||.+.+.+-+.+.+++++|.|||+++|+++ .+.++||++++|++ |+.|..|+.
T Consensus 155 DEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 155 DEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred cCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 9999999999999999999999999999999999987 68899999999984 789999986
No 121
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.1e-39 Score=363.61 Aligned_cols=207 Identities=28% Similarity=0.375 Sum_probs=177.4
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 787 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ 787 (1065)
+++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|+++.. ..+++.+|||+|++.+++.
T Consensus 14 ~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~ 91 (402)
T PRK09536 14 GDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVEALSARAASRRVASVPQDTSLSFE 91 (402)
T ss_pred CCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCC
Confidence 45789999999999999999999999999999999999877 568999999987643 3456789999999999899
Q ss_pred CCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 788 LTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
+||+|++.++...... .........++++++++.+++.+..++.+ ..||||||||++|||||+++|++||||||
T Consensus 92 ~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSgGerQRv~IArAL~~~P~iLLLDEP 166 (402)
T PRK09536 92 FDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSGGERQRVLLARALAQATPVLLLDEP 166 (402)
T ss_pred CCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 9999999875321100 00012334567899999999988877654 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|+|||+.++..++++|++++++|+|||+++|+++ ++.+.||++++|+ +|++++.|++.
T Consensus 167 tsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~-~G~iv~~G~~~ 224 (402)
T PRK09536 167 TASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLA-DGRVRAAGPPA 224 (402)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEecCHH
Confidence 9999999999999999999877999999999987 5778999999998 58999999864
No 122
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-38 Score=343.20 Aligned_cols=205 Identities=29% Similarity=0.387 Sum_probs=173.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c-ccceEEEEcCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSPG 787 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~~~v~q~~~~~~~ 787 (1065)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.+++.
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 12 GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 4579999999999999999999999999999999999876 5689999999876431 1 23569999999999999
Q ss_pred CCHHHHHHHHhhccCCCC-------CCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCc
Q 001507 788 LTVLESLLFSAWLRLPSE-------IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 860 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~-------~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~i 860 (1065)
+||+||+.+....+.... .......+.++++++.+++.+..++.+ ..||||||||++|||||+.+|++
T Consensus 90 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~l 164 (236)
T cd03219 90 LTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA-----GELSYGQQRRLEIARALATDPKL 164 (236)
T ss_pred CCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999988654321110 012334456789999999987666543 57999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 861 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 861 l~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|. +|++++.|+.
T Consensus 165 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 227 (236)
T cd03219 165 LLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLD-QGRVIAEGTP 227 (236)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEe-CCEEEeecCH
Confidence 9999999999999999999999999877999999999987 5778899999998 5899988864
No 123
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.5e-38 Score=337.53 Aligned_cols=200 Identities=27% Similarity=0.391 Sum_probs=170.5
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc-cccceEEEEcCCCCCCCCCCH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~~~v~q~~~~~~~ltv 790 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|+
T Consensus 12 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 12 NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 4579999999999999999999999999999999999876 5689999999876431 224579999999988889999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+||+.+....+. ....+..++++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~L 161 (213)
T cd03301 90 YDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSNL 161 (213)
T ss_pred HHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988654321 223344556788999999987766544 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 871 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
|+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |++++.|
T Consensus 162 D~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 162 DAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 999999999999999764 899999999986 56778999999984 7888765
No 124
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=358.76 Aligned_cols=202 Identities=26% Similarity=0.334 Sum_probs=175.1
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc------cccceEEEEcCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHS 785 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~~~~ 785 (1065)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... .+++.+||++|++.++
T Consensus 17 ~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 17 TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 3579999999999999999999999999999999999877 5689999999876431 2356799999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
+.+||+||+.+....+. ....+..++++++++.+++.+..++.. ..|||||||||+|||||+.+|++|||||
T Consensus 95 ~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~qRv~lAraL~~~p~iLlLDE 166 (343)
T PRK11153 95 SSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLSGGQKQRVAIARALASNPKVLLCDE 166 (343)
T ss_pred CCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 99999999998754432 233444567889999999987766543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|+ +|++++.|+.
T Consensus 167 Pts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~-~G~i~~~g~~ 225 (343)
T PRK11153 167 ATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVID-AGRLVEQGTV 225 (343)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 99999999999999999999765 899999999986 5777899999998 5899998875
No 125
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.3e-39 Score=363.78 Aligned_cols=219 Identities=26% Similarity=0.364 Sum_probs=182.0
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC-CceEEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYV 85 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~-~~~~~yv 85 (1065)
+++++.+++ +.+|+|+||++++||+++|+|||||||||||++|+|++.|+ +|+|.++|+++..... ++.++||
T Consensus 6 ~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v 79 (353)
T PRK10851 6 ANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFV 79 (353)
T ss_pred EEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEE
Confidence 345554432 46999999999999999999999999999999999998876 9999999998754332 3679999
Q ss_pred ccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccc
Q 001507 86 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 165 (1065)
Q Consensus 86 ~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 165 (1065)
+|++.+++++||+||+.|+..........+ ..+..++++++++.+||++.
T Consensus 80 ~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~L~~~ 129 (353)
T PRK10851 80 FQHYALFRHMTVFDNIAFGLTVLPRRERPN------------------------------AAAIKAKVTQLLEMVQLAHL 129 (353)
T ss_pred ecCcccCCCCcHHHHHHhhhhhcccccCCC------------------------------HHHHHHHHHHHHHHcCCchh
Confidence 999999999999999998754311000000 00112347889999999877
Q ss_pred ccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhh
Q 001507 166 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 245 (1065)
Q Consensus 166 ~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~ 245 (1065)
.++.+ ..|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++.++ .+.++++++|+.+++..+
T Consensus 130 ~~~~~-----~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tii~vTHd~~ea~~~ 203 (353)
T PRK10851 130 ADRYP-----AQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEE-LKFTSVFVTHDQEEAMEV 203 (353)
T ss_pred hhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHh
Confidence 76554 569999999999999999999999999999999999999999999998764 356777799999999999
Q ss_pred cccEEEecCCcEEEEcCcchHH
Q 001507 246 FDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 246 ~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+|+|++|++|++++.|+++++.
T Consensus 204 ~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 204 ADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred CCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999998874
No 126
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.6e-38 Score=341.98 Aligned_cols=203 Identities=24% Similarity=0.344 Sum_probs=173.3
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c-ccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (232)
T cd03218 11 GKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFR 88 (232)
T ss_pred CCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccCCHhHHHhccEEEecCCccccc
Confidence 34679999999999999999999999999999999999876 5689999999875321 1 2356999999999999
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+|++||+.+....+. .......+.++++++.+++.+..+... ..||||||||++|||||+.+|++|+||||
T Consensus 89 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 160 (232)
T cd03218 89 KLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGERRRVEIARALATNPKFLLLDEP 160 (232)
T ss_pred cCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 9999999987643322 122334456788999999987666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 161 t~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 217 (232)
T cd03218 161 FAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIY-EGKVLAEGTP 217 (232)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEEeCH
Confidence 9999999999999999999877999999999986 6788899999998 5899988875
No 127
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.2e-38 Score=336.63 Aligned_cols=196 Identities=28% Similarity=0.410 Sum_probs=168.7
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCCH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+||
T Consensus 12 ~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 12 KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 4579999999999999999999999999999999999876 568999999987643 2345679999999988999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+||+.+....+. . ..++++++++.+++.+..+... ..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 90 ~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 157 (208)
T cd03268 90 RENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNGL 157 (208)
T ss_pred HHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccC
Confidence 999988654321 1 1345788899999987766543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 871 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
|+.++..+.+.|++++++|+|||++||+++ .+...+|++++|+ +|++++.|
T Consensus 158 D~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~-~g~i~~~g 208 (208)
T cd03268 158 DPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIIN-KGKLIEEG 208 (208)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEE-CCEEEecC
Confidence 999999999999998777899999999986 4667899999998 47887654
No 128
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-38 Score=342.24 Aligned_cols=205 Identities=28% Similarity=0.379 Sum_probs=172.4
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc-cccceEEEEcCCCCCCCCCCH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~~~v~q~~~~~~~ltv 790 (1065)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 14 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 14 DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 4579999999999999999999999999999999999876 5689999999876432 224569999999988889999
Q ss_pred HHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 791 LESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 791 ~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
+||+.+....+.. .........+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+|
T Consensus 92 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP~~~ 166 (239)
T cd03296 92 FDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEPFGA 166 (239)
T ss_pred HHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999886543211 00122333456788999999977666543 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 870 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|+ +|++++.|+.
T Consensus 167 LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 221 (239)
T cd03296 167 LDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMN-KGRIEQVGTP 221 (239)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEecCH
Confidence 9999999999999999765 899999999986 5678899999998 5899988875
No 129
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.7e-38 Score=353.23 Aligned_cols=202 Identities=26% Similarity=0.375 Sum_probs=176.6
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~l 788 (1065)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+
T Consensus 13 ~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~ 90 (301)
T TIGR03522 13 GTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDM 90 (301)
T ss_pred CCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccChHHHHhceEEecCCCCCCCCC
Confidence 45679999999999999999999999999999999999877 568999999987643 23456799999999999999
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||.||+.|.+.++. ...++..++++++++.+++.+..++.+ +.||||||||++||+||+.+|++|||||||+
T Consensus 91 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lliLDEPt~ 162 (301)
T TIGR03522 91 YVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYRQRVGLAQALIHDPKVLILDEPTT 162 (301)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999998765542 122334456789999999998877664 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|+ +|++++.|+.
T Consensus 163 gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~-~G~i~~~g~~ 216 (301)
T TIGR03522 163 GLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIIN-KGKIVADKKL 216 (301)
T ss_pred cCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999864 799999999986 6888899999998 5899999985
No 130
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.4e-38 Score=341.12 Aligned_cols=204 Identities=25% Similarity=0.316 Sum_probs=170.9
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCC-----CCCeeEEEEEECCccCCc-----ccccceEEEEcC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK-----TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQ 780 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~-----~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q 780 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.++.. ..+++.+||++|
T Consensus 11 ~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q 88 (227)
T cd03260 11 GDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQ 88 (227)
T ss_pred CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEec
Confidence 3457999999999999999999999999999999999987 5 568999999987532 234567999999
Q ss_pred CCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCc
Q 001507 781 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 860 (1065)
Q Consensus 781 ~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~i 860 (1065)
++.++ .+||+||+.+....+.. .......++++++++.+++.+..+.... +.+||||||||++|||||+.+|++
T Consensus 89 ~~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~l 162 (227)
T cd03260 89 KPNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEV 162 (227)
T ss_pred Cchhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCE
Confidence 98887 79999999886543311 1112234567889999999776554320 257999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 861 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 861 l~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||||+|||+.++..+.+.|++++++ +|||++||+++ .+...+|++++|. +|++++.|+.
T Consensus 163 lllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 224 (227)
T cd03260 163 LLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLL-NGRLVEFGPT 224 (227)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEe-CCEEEEecCc
Confidence 9999999999999999999999999876 99999999986 5677899999998 5899988875
No 131
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.5e-38 Score=338.79 Aligned_cols=198 Identities=28% Similarity=0.428 Sum_probs=170.7
Q ss_pred eEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCCCHH
Q 001507 714 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTVL 791 (1065)
Q Consensus 714 ~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv~ 791 (1065)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+||+
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 69999999999999999999999999999999999876 568999999987643 23456799999999889999999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCC
Q 001507 792 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 871 (1065)
Q Consensus 792 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD 871 (1065)
||+.+....+. ....+..++++++++.+++.+..+... ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 97 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 97 ENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 99987654331 223344567789999999987766544 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 872 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 872 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
+.++..+.+.|+++.++|+|||++||+++ ++...+|++++|++ |++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 99999999999999777999999999986 57788999999985 7887654
No 132
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=7.1e-38 Score=336.87 Aligned_cols=193 Identities=24% Similarity=0.300 Sum_probs=143.0
Q ss_pred eeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHHHHHHhh
Q 001507 720 TGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAW 799 (1065)
Q Consensus 720 s~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~ 799 (1065)
.++|..||+++++||||-||||+.++|+|..+ +.+|+ .. .-.++|-||--.--...||++.+.-...
T Consensus 361 ~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~~~~ 427 (591)
T COG1245 361 EGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRSAIR 427 (591)
T ss_pred CCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHHHhhh
Confidence 46788999999999999999999999999877 45665 11 1246888886444456799998754322
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHH
Q 001507 800 LRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVM 879 (1065)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~ 879 (1065)
-+...+ -...++.+-|.|..+.+..+ .+|||||.|||+||.+|.++.+|.+||||++.||.+.+..+-
T Consensus 428 ~~~~~s-------~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~va 495 (591)
T COG1245 428 SAFGSS-------YFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVA 495 (591)
T ss_pred hhcccc-------hhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHH
Confidence 111111 12357788888888887765 589999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC---CCCCchhHHHHHHHhcC
Q 001507 880 RTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG---PLGSKSCELIKYFEAVE 940 (1065)
Q Consensus 880 ~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g---~~~~~~~~~~~~~~~~~ 940 (1065)
+.||++... ++|.+++-||.-+ +--..||+++.. |+---+| ++....+.+-.|...++
T Consensus 496 kvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~--GePg~~g~a~~P~~mr~GMN~FLk~l~ 557 (591)
T COG1245 496 KVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE--GEPGKHGHASPPMSMREGMNRFLKNLG 557 (591)
T ss_pred HHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe--cCCCccCcCCCCccHHHHHHHHHHHcC
Confidence 999999754 8999999999753 333468888875 3322222 12222334556666664
No 133
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-39 Score=313.18 Aligned_cols=206 Identities=26% Similarity=0.401 Sum_probs=176.5
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 787 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ 787 (1065)
.++.+|++||++++|||++||+|||||||||||+.|+|... +.+|++.+||.+... ..+.+..+..||+..+-..
T Consensus 12 ~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFp 89 (259)
T COG4559 12 AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFP 89 (259)
T ss_pred ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChhhCCHHHHHHHhhhcccCcccccc
Confidence 56789999999999999999999999999999999999877 468999999998654 3456677999999888777
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHh------CCCce
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA------NPSIV 861 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~------~p~il 861 (1065)
.||+|-+.++..-.. ......+..+..+++|...++.+++.+.. ..|||||||||.+||.|++ ++++|
T Consensus 90 Ftv~eVV~mGr~p~~-~g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGEqQRVqlARvLaQl~~~v~~~r~L 163 (259)
T COG4559 90 FTVQEVVQMGRIPHR-SGREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGEQQRVQLARVLAQLWPPVPSGRWL 163 (259)
T ss_pred eEHHHHHHhcccccc-cCCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchHHHHHHHHHHHHHccCCCCCCceE
Confidence 899999998743211 11122345566889999999999988754 4799999999999999976 34689
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 862 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 862 ~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|||||||.||...+..++++.|+++++|..|+++-||++. ...++|||++|. +|+++..|++.
T Consensus 164 ~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~-~Grv~a~g~p~ 226 (259)
T COG4559 164 FLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLH-QGRVIASGSPQ 226 (259)
T ss_pred EecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeee-CCeEeecCCHH
Confidence 9999999999999999999999999999999999999985 678899999998 58999999874
No 134
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=5.1e-36 Score=388.42 Aligned_cols=201 Identities=26% Similarity=0.373 Sum_probs=177.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~lt 789 (1065)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|+++.. ...++.+|||+|++.+++.+|
T Consensus 942 ~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LT 1019 (2272)
T TIGR01257 942 GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLT 1019 (2272)
T ss_pred CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCC
Confidence 4679999999999999999999999999999999999987 568999999988643 234567999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
|+||+.|.++++.. ..++.+++++++++.++|.+..++.+ ++|||||||||+||+||+.+|+||||||||+|
T Consensus 1020 V~E~L~f~~~lkg~---~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGGqKQRLsLArALi~~PkVLLLDEPTSG 1091 (2272)
T TIGR01257 1020 VAEHILFYAQLKGR---SWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSG 1091 (2272)
T ss_pred HHHHHHHHHHhcCC---CHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcC
Confidence 99999998766532 22344567889999999988877654 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 870 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+.+++.++++|++++ +|+|||++||+++ ++...+||+++|+ +|+++..|+.
T Consensus 1092 LDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~-~GkL~~~Gs~ 1144 (2272)
T TIGR01257 1092 VDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIIS-QGRLYCSGTP 1144 (2272)
T ss_pred CCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 99999999999999985 6999999999986 5777899999998 5899999875
No 135
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1e-38 Score=336.26 Aligned_cols=192 Identities=28% Similarity=0.399 Sum_probs=163.6
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCC-CCCCCCHH
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI-HSPGLTVL 791 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~-~~~~ltv~ 791 (1065)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.....++.+||++|++. .+..+|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 579999999999999999999999999999999999876 568999999987644445567999999974 33467999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCC
Q 001507 792 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 871 (1065)
Q Consensus 792 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD 871 (1065)
||+.+..... . ...++++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D----AGNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C----ccHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754322 1 11245788999999987776654 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 001507 872 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 920 (1065)
Q Consensus 872 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 920 (1065)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999986 56678999999985 6763
No 136
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=7.2e-39 Score=356.71 Aligned_cols=206 Identities=26% Similarity=0.375 Sum_probs=177.0
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--CCCceEEEEccccccCCCCC
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMT 96 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lT 96 (1065)
+.+|+|+||++++||+++|+||||||||||+++|+|++.|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999876 99999999876432 12456999999999999999
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccc
Q 001507 97 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 176 (1065)
Q Consensus 97 v~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 176 (1065)
|+||+.+.+...+... ......++++++.+||.+..++.+ +
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPV-----G 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCch-----h
Confidence 9999988654332100 001224788999999988777665 4
Q ss_pred cCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCc
Q 001507 177 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 256 (1065)
Q Consensus 177 ~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~ 256 (1065)
.|||||||||+||+||+.+|++++|||||+|||+.++..+++.|+++++. +++|++++|+.+++..+||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~--g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE--GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999998643 5677889999999999999999999999
Q ss_pred EEEEcCcchHHH
Q 001507 257 IVYQGPRVSVLD 268 (1065)
Q Consensus 257 i~~~G~~~~~~~ 268 (1065)
+++.|+++++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999888754
No 137
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-39 Score=363.80 Aligned_cols=215 Identities=21% Similarity=0.281 Sum_probs=182.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYV 85 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~yv 85 (1065)
+++++.++ +..+|+|+||++++||+++|+|||||||||||++|+|+..|+ +|+|.++|.++.... .++.++||
T Consensus 23 ~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~v 96 (377)
T PRK11607 23 RNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMM 96 (377)
T ss_pred EeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEE
Confidence 44554443 246999999999999999999999999999999999999876 999999999875533 35679999
Q ss_pred ccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccc
Q 001507 86 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 165 (1065)
Q Consensus 86 ~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 165 (1065)
+|++.+|+++||.||+.|+.+.++.. ..+..++++++++.+||.+.
T Consensus 97 fQ~~~lfp~ltv~eNi~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~l~L~~~ 142 (377)
T PRK11607 97 FQSYALFPHMTVEQNIAFGLKQDKLP----------------------------------KAEIASRVNEMLGLVHMQEF 142 (377)
T ss_pred eCCCccCCCCCHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCchh
Confidence 99999999999999999976432110 00112347889999999877
Q ss_pred ccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhh
Q 001507 166 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 245 (1065)
Q Consensus 166 ~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~ 245 (1065)
.+.. +.+|||||||||+|||||+.+|++|||||||++||..++..+.+.|+++.++. +.+++.+||+.+++..+
T Consensus 143 ~~~~-----~~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l 216 (377)
T PRK11607 143 AKRK-----PHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTM 216 (377)
T ss_pred hcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHh
Confidence 6654 45799999999999999999999999999999999999999999999887654 56677799999999999
Q ss_pred cccEEEecCCcEEEEcCcchHH
Q 001507 246 FDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 246 ~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+|++++|++|+++..|+++++.
T Consensus 217 aDri~vl~~G~i~~~g~~~~~~ 238 (377)
T PRK11607 217 AGRIAIMNRGKFVQIGEPEEIY 238 (377)
T ss_pred CCEEEEEeCCEEEEEcCHHHHH
Confidence 9999999999999999998874
No 138
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-39 Score=366.59 Aligned_cols=216 Identities=25% Similarity=0.378 Sum_probs=181.8
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAY 84 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~y 84 (1065)
++++++.++ ++.+|+|+||++++|++++|+|||||||||||++|+|++.|+ +|+|.++|.++.... .++.++|
T Consensus 6 i~~l~~~~~---~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 6 LRNVTKAYG---DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEE
Confidence 445555553 246999999999999999999999999999999999999876 999999998875432 2467999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
|+|++.+++++||+||+.|+...++... .+...+++++++.+||.+
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~ 125 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAH 125 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChh
Confidence 9999999999999999998754321100 001234788999999987
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..++.+ .+|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++. ++++++++|+.+++..
T Consensus 126 ~~~~~~-----~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~ 199 (369)
T PRK11000 126 LLDRKP-----KALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMT 199 (369)
T ss_pred hhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHH
Confidence 776654 4699999999999999999999999999999999999999999999987543 5667779999999999
Q ss_pred hcccEEEecCCcEEEEcCcchHH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+||+|++|++|++++.|+++++.
T Consensus 200 ~~d~i~vl~~G~i~~~g~~~~i~ 222 (369)
T PRK11000 200 LADKIVVLDAGRVAQVGKPLELY 222 (369)
T ss_pred hCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999988774
No 139
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.7e-38 Score=338.41 Aligned_cols=193 Identities=31% Similarity=0.433 Sum_probs=165.0
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc-------cccceEEEEcCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-------TFARISGYCEQNDIHS 785 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-------~~~~~~~~v~q~~~~~ 785 (1065)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 579999999999999999999999999999999999876 5689999999876421 1245799999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
+.+||+||+.+....+. .......+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|||||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998754432 122334456889999999987666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 866 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
||+|||+.++..+.+.|+++++ .|+|||++||+++ ++ ..+|++++|++ |+
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRD-GK 217 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeC-Cc
Confidence 9999999999999999999976 5899999999986 34 48999999985 54
No 140
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-39 Score=333.53 Aligned_cols=221 Identities=24% Similarity=0.329 Sum_probs=191.3
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-------CCceEEEEcccccc
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDWQ 91 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-------~~~~~~yv~Q~~~~ 91 (1065)
..-++|+|++++.||+..|||-||||||||+++|.+++.|+ .|+|.++|.++.... .++.+++|+|+..+
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaL 117 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFAL 117 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcc
Confidence 45689999999999999999999999999999999999876 999999999876543 24679999999999
Q ss_pred CCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccccccccc
Q 001507 92 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 171 (1065)
Q Consensus 92 ~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg 171 (1065)
+|+.||.||..|+.+.++... .+.++++.+.|+..||+...+..
T Consensus 118 lPhrtVl~Nv~fGLev~Gv~~----------------------------------~er~~~a~~~l~~VgL~~~~~~y-- 161 (386)
T COG4175 118 LPHRTVLENVAFGLEVQGVPK----------------------------------AEREERALEALELVGLEGYADKY-- 161 (386)
T ss_pred ccchhHhhhhhcceeecCCCH----------------------------------HHHHHHHHHHHHHcCchhhhhcC--
Confidence 999999999999988876432 11234578899999999988765
Q ss_pred CcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEE
Q 001507 172 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 251 (1065)
Q Consensus 172 ~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~ 251 (1065)
+++||||+||||.|||||+.+|+||++|||+|+|||--+.++.+.|.++.+.. ++||++++||.+|++++.|||.+
T Consensus 162 ---p~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l-~KTIvFitHDLdEAlriG~rIai 237 (386)
T COG4175 162 ---PNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKL-KKTIVFITHDLDEALRIGDRIAI 237 (386)
T ss_pred ---cccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHh-CCeEEEEecCHHHHHhccceEEE
Confidence 45699999999999999999999999999999999999999999999988765 56677799999999999999999
Q ss_pred ecCCcEEEEcCcchHHHHHHhCCCCCCCCCChhHHHHHh
Q 001507 252 LSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEV 290 (1065)
Q Consensus 252 l~~G~i~~~G~~~~~~~~f~~lG~~~p~~~~~~d~l~~~ 290 (1065)
|.+|+|+..|++++++. .|.+...++|...+
T Consensus 238 mkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 238 MKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred ecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 99999999999999974 35554455665554
No 141
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-38 Score=341.80 Aligned_cols=215 Identities=25% Similarity=0.336 Sum_probs=177.2
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPR 80 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~ 80 (1065)
+++++.++ ...+|+|+||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++
T Consensus 4 ~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 4 RGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred EEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhc
Confidence 34555443 246999999999999999999999999999999999999775 999999998765432 245
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+||+||+.++...... .. .......++++++.+
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~---~~------------------------------~~~~~~~~~~~l~~~ 124 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTR---LS------------------------------EEEIREIVLEKLEAV 124 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccC---CC------------------------------HHHHHHHHHHHHHHc
Confidence 799999999889999999999886432100 00 000122367889999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+++.|+++++. .+++|++++|+.+
T Consensus 125 ~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~ 198 (235)
T cd03261 125 GLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLD 198 (235)
T ss_pred CCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHH
Confidence 9987666554 469999999999999999999999999999999999999999999998653 3567777999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
++..+||++++|++|++++.|+++++
T Consensus 199 ~~~~~~d~v~~l~~G~i~~~g~~~~~ 224 (235)
T cd03261 199 TAFAIADRIAVLYDGKIVAEGTPEEL 224 (235)
T ss_pred HHHHhcCEEEEEECCeEEEecCHHHH
Confidence 99999999999999999999987665
No 142
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-38 Score=340.08 Aligned_cols=200 Identities=27% Similarity=0.341 Sum_probs=172.3
Q ss_pred eEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc------cccceEEEEcCCCCCCCC
Q 001507 714 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSPG 787 (1065)
Q Consensus 714 ~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~~~~~~ 787 (1065)
.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 79999999999999999999999999999999999877 5689999999876431 235679999999999999
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
+|++||+.+....+. .......+.++++++.+++.+..+... ..||||||||++|||+|+.+|++|+|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999988654332 223334556789999999987766543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|. +|++++.|+.
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 225 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVME-KGEVVEEGTV 225 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999765 899999999986 5677899999998 5899988864
No 143
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.6e-38 Score=356.25 Aligned_cols=215 Identities=27% Similarity=0.362 Sum_probs=181.3
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--CCCceEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAY 84 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--~~~~~~~y 84 (1065)
++++..++ ++.+|+||||+|++|++++|+||||||||||+++|+|++.|+ +|+|.++|.++... ..++.++|
T Consensus 45 ~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~ 118 (340)
T PRK13536 45 AGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGV 118 (340)
T ss_pred EEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEE
Confidence 44444443 356999999999999999999999999999999999999876 99999999987543 23467999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
++|++.+++.+||+||+.|.....+... .+....++++++.+||.+
T Consensus 119 v~q~~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~ 164 (340)
T PRK13536 119 VPQFDNLDLEFTVRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLES 164 (340)
T ss_pred EeCCccCCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCch
Confidence 9999998999999999987544321100 001123677889999998
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..++.++ +||||||||++||+||+.+|++++|||||+|||+.++.++++.|+++.. .+++|++++|+.+++.+
T Consensus 165 ~~~~~~~-----~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~--~g~tilisSH~l~e~~~ 237 (340)
T PRK13536 165 KADARVS-----DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAER 237 (340)
T ss_pred hhCCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHH
Confidence 8877664 5999999999999999999999999999999999999999999999865 35678889999999999
Q ss_pred hcccEEEecCCcEEEEcCcchHHH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
+||+|++|++|++++.|+++++..
T Consensus 238 ~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 238 LCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred hCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999988754
No 144
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-38 Score=342.57 Aligned_cols=204 Identities=28% Similarity=0.378 Sum_probs=170.7
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~~~~~ 786 (1065)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 579999999999999999999999999999999999876 468999999987642 224567999999999999
Q ss_pred CCCHHHHHHHHhhccC-----CCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCce
Q 001507 787 GLTVLESLLFSAWLRL-----PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 861 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~-----~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il 861 (1065)
.+||+||+.+...... ..........++++++++.+++.+..+... ..|||||||||+|||||+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA-----DQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----ccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999987532100 001111233456788999999977665543 579999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 862 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 862 ~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|. +|++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLK-DGRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEeecCH
Confidence 999999999999999999999999764 899999999987 5777899999998 5899988875
No 145
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=359.68 Aligned_cols=219 Identities=23% Similarity=0.338 Sum_probs=182.2
Q ss_pred HHHhhhhcCC-ccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------C
Q 001507 6 LRQLRIYRGN-RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------P 78 (1065)
Q Consensus 6 ~~~~~~~~~~-~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~ 78 (1065)
++++++.++. ..++.+|+|+||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .
T Consensus 4 i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 4 LKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred EEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHH
Confidence 3456665542 12357999999999999999999999999999999999999876 999999999875432 1
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++.+||+||+.++....+... .+...+++++++
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~ 126 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLE 126 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHH
Confidence 4579999999998999999999998654321100 001224778899
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||++..++.+ +.|||||||||+|||||+.+|+++||||||+|||+.++..+++.|+++++. .+++|++++|+
T Consensus 127 ~~gL~~~~~~~~-----~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~ 200 (343)
T PRK11153 127 LVGLSDKADRYP-----AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHE 200 (343)
T ss_pred HcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCC
Confidence 999988776654 469999999999999999999999999999999999999999999998754 35677779999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++.++||++++|++|++++.|+++++.
T Consensus 201 ~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 201 MDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999987764
No 146
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.2e-38 Score=335.81 Aligned_cols=200 Identities=30% Similarity=0.449 Sum_probs=171.4
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCCCH
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 579999999999999999999999999999999999876 568999999987642 2345679999999998889999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+||+.+....+. .......++++++++.+++.+..++.. ..||+|||||++|||+|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654332 122333456788999999977666543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 871 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+.++..+.+.|+++++ ++|||+++|+++ .+...+|++++|. +|++++.|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMS-DGKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEE-CCEEEecCCH
Confidence 99999999999999875 699999999987 4667899999998 5899988864
No 147
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.5e-38 Score=339.29 Aligned_cols=203 Identities=25% Similarity=0.372 Sum_probs=173.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-----ccccceEEEEcCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~~~~ 786 (1065)
++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 13 ~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 13 PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 4579999999999999999999999999999999999876 568999999987642 234567999999998888
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+||+||+.+...... ........+.+.++++.+++.+..+... ..||||||||++|||||+.+|++|+||||
T Consensus 91 ~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP 163 (240)
T PRK09493 91 HLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSGGQQQRVAIARALAVKPKLMLFDEP 163 (240)
T ss_pred CCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999987642111 1223344556789999999977666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 164 ~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 220 (240)
T PRK09493 164 TSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFID-KGRIAEDGDP 220 (240)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEeeCCH
Confidence 9999999999999999999877999999999986 5667899999998 5899998875
No 148
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.1e-37 Score=333.54 Aligned_cols=206 Identities=38% Similarity=0.706 Sum_probs=171.8
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC-CCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT-GGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~-~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
.+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+.+|+|.++|.++....+++.++|++|++.+++.+||
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv 98 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTV 98 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcH
Confidence 3679999999999999999999999999999999999865 123689999999877544566789999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHH-HHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEE-VMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
+||+.|......+.........+.+++ .++.+++.+..++.+ +.||||||||++|||+|+.+|++|+|||||+|
T Consensus 99 ~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~illlDEP~~g 173 (226)
T cd03234 99 RETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV-----KGISGGERRRVSIAVQLLWDPKVLILDEPTSG 173 (226)
T ss_pred HHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc-----cCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcC
Confidence 999998755433221122222334455 888888877665543 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 870 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|. +|++++.|
T Consensus 174 LD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~-~G~i~~~g 226 (226)
T cd03234 174 LDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLS-SGEIVYSG 226 (226)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEe-CCEEEecC
Confidence 999999999999999877789999999998446888999999998 47888765
No 149
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-38 Score=347.01 Aligned_cols=201 Identities=24% Similarity=0.345 Sum_probs=171.0
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-----ccccceEEEEcCCCC-CCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HSP 786 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~-~~~ 786 (1065)
+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+|||+|++. .+.
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 97 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLF 97 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECCCcCccHHHHhhceEEEecCchhccc
Confidence 469999999999999999999999999999999999877 568999999988643 234578999999863 334
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC--ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeec
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT--SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 864 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~--~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lD 864 (1065)
..||+||+.|..... ....++..++++++++.++|. +..++. +..||||||||++|||||+.+|++||||
T Consensus 98 ~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~LSgGq~qrv~iAraL~~~P~llllD 169 (287)
T PRK13637 98 EETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFELSGGQKRRVAIAGVVAMEPKILILD 169 (287)
T ss_pred cccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 579999999865432 233445556788999999996 455544 3589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 865 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 865 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+|||+.++..+++.|++++++ |+|||++||+++ ++...||++++|++ |++++.|++
T Consensus 170 EPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~i~~~g~~ 229 (287)
T PRK13637 170 EPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GKCELQGTP 229 (287)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999765 899999999986 56678999999984 899999875
No 150
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-38 Score=337.42 Aligned_cols=209 Identities=30% Similarity=0.420 Sum_probs=172.5
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYV 85 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~yv 85 (1065)
+++++.+++ +.+|+|+||++++||+++|+||||||||||+++|+|.+.|. +|+|.++|.++.... .++.++|+
T Consensus 4 ~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 4 KGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred eeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEE
Confidence 345554432 46999999999999999999999999999999999998775 999999998775432 24579999
Q ss_pred ccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccc
Q 001507 86 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 165 (1065)
Q Consensus 86 ~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 165 (1065)
+|++.+++.+||+||+.++....+. . . ......++++++.+||.+.
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~----~---~---------------------------~~~~~~~~~~l~~~~l~~~ 123 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGV----P---K---------------------------AEIRARVRELLELVGLEGL 123 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCC----C---H---------------------------HHHHHHHHHHHHHcCChhh
Confidence 9999888899999999876432110 0 0 0011236788999999877
Q ss_pred ccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhh
Q 001507 166 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 245 (1065)
Q Consensus 166 ~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~ 245 (1065)
.++.+ ..||||||||++|||||+.+|++++|||||+|||+.++..+++.|+++++. .+++|++++|+.+++.++
T Consensus 124 ~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~ 197 (213)
T cd03259 124 LNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALAL 197 (213)
T ss_pred hhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHh
Confidence 66654 469999999999999999999999999999999999999999999998653 356777799999999999
Q ss_pred cccEEEecCCcEEEEc
Q 001507 246 FDDVILLSEGQIVYQG 261 (1065)
Q Consensus 246 ~D~v~~l~~G~i~~~G 261 (1065)
||++++|++|++++.|
T Consensus 198 ~d~v~~l~~G~i~~~g 213 (213)
T cd03259 198 ADRIAVMNEGRIVQVG 213 (213)
T ss_pred cCEEEEEECCEEEecC
Confidence 9999999999998765
No 151
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-38 Score=340.10 Aligned_cols=201 Identities=26% Similarity=0.350 Sum_probs=171.3
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 791 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~ 791 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+.+||++|++.+++.+||.
T Consensus 13 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 13 GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHH
Confidence 4579999999999999999999999999999999999876 568999999987643 234589999999888889999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCC
Q 001507 792 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 871 (1065)
Q Consensus 792 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD 871 (1065)
||+.+....+. .......++++++++.+++.+..+... ..||||||||++|||+|+.+|++|||||||+|||
T Consensus 89 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD 160 (255)
T PRK11248 89 DNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQRVGIARALAANPQLLLLDEPFGALD 160 (255)
T ss_pred HHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 99987643321 223334456889999999977666543 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEec-CcEEEEeCCC
Q 001507 872 ARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 925 (1065)
Q Consensus 872 ~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~-gg~~~~~g~~ 925 (1065)
+.++..+.+.|+++++ +|+|||++||+++ .+...+|++++|.+ +|+++..++.
T Consensus 161 ~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 161 AFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999854 5899999999987 57788999999984 5899888764
No 152
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.7e-38 Score=336.09 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=168.4
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c-ccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.+++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (222)
T cd03224 11 GKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFP 88 (222)
T ss_pred CCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCC
Confidence 34579999999999999999999999999999999999877 5689999999875431 1 2456999999999999
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHc-CCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
.+|++||+.+...... .....+.+.++++.+ ++.+..+.. +..||||||||++|||||+.+|++|+|||
T Consensus 89 ~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDE 158 (222)
T cd03224 89 ELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDE 158 (222)
T ss_pred CCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 9999999988654321 122334566777777 465555543 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+|||+.++..+++.|++++++|+|||++||+++ ++...+|++++|. +|+++..|+.
T Consensus 159 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 216 (222)
T cd03224 159 PSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLE-RGRVVLEGTA 216 (222)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEee-CCeEEEeCCH
Confidence 99999999999999999999777899999999986 5678899999998 5899988864
No 153
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-38 Score=342.94 Aligned_cols=207 Identities=23% Similarity=0.273 Sum_probs=175.4
Q ss_pred cccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c----ccceEEEEc
Q 001507 707 GVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T----FARISGYCE 779 (1065)
Q Consensus 707 ~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~~~v~ 779 (1065)
.+.++++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++
T Consensus 31 ~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~ 108 (269)
T cd03294 31 LKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVF 108 (269)
T ss_pred hhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEe
Confidence 334566789999999999999999999999999999999999876 5689999999875421 1 235799999
Q ss_pred CCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 780 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 780 q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
|++.+++.+||+||+.+...... .......++++++++.+++.+..+..+ ..||||||||++|||||+.+|+
T Consensus 109 q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~ 180 (269)
T cd03294 109 QSFALLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPD 180 (269)
T ss_pred cCcccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCC
Confidence 99999989999999988654321 122334456788999999987766654 4799999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|. +|++++.|+.
T Consensus 181 illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 245 (269)
T cd03294 181 ILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMK-DGRLVQVGTP 245 (269)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999999999754 899999999986 5678899999998 5899988875
No 154
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=334.72 Aligned_cols=200 Identities=28% Similarity=0.392 Sum_probs=169.4
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCccc------c-cceEEEEcCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQET------F-ARISGYCEQNDIHS 785 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~------~-~~~~~~v~q~~~~~ 785 (1065)
+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|+++.... + ++.++|++|++.++
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~ 99 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLL 99 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccC
Confidence 579999999999999999999999999999999999876 56899999998764311 2 25699999999888
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
+.+|++||+.+....+. .......++++++++.+++.+..+... ..||||||||++|||+|+.+|++|||||
T Consensus 100 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDE 171 (233)
T PRK11629 100 PDFTALENVAMPLLIGK---KKPAEINSRALEMLAAVGLEHRANHRP-----SELSGGERQRVAIARALVNNPRLVLADE 171 (233)
T ss_pred CCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999999988654321 122344466889999999987666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+|||+.++..+.+.|+++++ +|+|||++||+++ ++ ..+|++++|. +|+++..++.
T Consensus 172 Pt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~-~G~i~~~~~~ 229 (233)
T PRK11629 172 PTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMR-DGRLTAELSL 229 (233)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEE-CCEEEEEecc
Confidence 9999999999999999999975 5899999999986 34 4468999997 5899988875
No 155
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-38 Score=338.84 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=171.9
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~lt 789 (1065)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 569999999999999999999999999999999999876 568999999987542 234567999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc--cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS--LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~--~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
++||+.+....+. .......+.++++++.+++.+ ..+.. +..|||||||||+|||||+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999988654331 223344566789999999975 55543 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|. +|++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMK-NGEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999764 899999999986 5678899999998 5899988874
No 156
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.8e-38 Score=333.85 Aligned_cols=193 Identities=25% Similarity=0.329 Sum_probs=165.4
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc------cccceEEEEcCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHS 785 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~~~~ 785 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... .+++.++|++|++.++
T Consensus 14 ~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 14 GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 3569999999999999999999999999999999999876 5689999999876421 2456799999999988
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
+.+|++||+.+....+. .......++++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||
T Consensus 92 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~lllLDE 163 (214)
T TIGR02673 92 PDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLSGGEQQRVAIARAIVNSPPLLLADE 163 (214)
T ss_pred cCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 89999999988754321 122334456789999999976655543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEec
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 915 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 915 (1065)
||+|||+.++..+.+.|+++.++|+|||++||+++ ++...+|++++|++
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~ 212 (214)
T TIGR02673 164 PTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDD 212 (214)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecC
Confidence 99999999999999999998777999999999986 57778999999975
No 157
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7.2e-38 Score=340.72 Aligned_cols=203 Identities=28% Similarity=0.375 Sum_probs=172.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-----------ccccceEEEEcC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----------ETFARISGYCEQ 780 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----------~~~~~~~~~v~q 780 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 15 GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 4579999999999999999999999999999999999876 568999999987532 123567999999
Q ss_pred CCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCc
Q 001507 781 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 860 (1065)
Q Consensus 781 ~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~i 860 (1065)
++.+++.+|++||+.+...... ........+.++++++.+++.+..+... ..||||||||++|||+|+.+|++
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~Gq~qrv~la~al~~~p~l 165 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYP-----RRLSGGQQQRVAIARALAMRPEV 165 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCCh-----hhCChHHHHHHHHHHHHhcCCCE
Confidence 9989989999999987543111 1223344556788999999987665543 57999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 861 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 861 l~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 166 llLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 228 (250)
T PRK11264 166 ILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMD-QGRIVEQGPA 228 (250)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999999877999999999986 5677899999998 5899988874
No 158
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.7e-38 Score=341.65 Aligned_cols=206 Identities=27% Similarity=0.340 Sum_probs=170.8
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 785 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~~~~ 785 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 14 ~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 14 GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 4569999999999999999999999999999999999876 568999999987532 12456799999999899
Q ss_pred CCCCHHHHHHHHhhccC-----CCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCc
Q 001507 786 PGLTVLESLLFSAWLRL-----PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 860 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~-----~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~i 860 (1065)
+.+||+||+.+...... ..........++++++++.+++.+..+... ..||||||||++|||||+.+|++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~l 166 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA-----DQLSGGQQQRVAIARALAQQPDL 166 (243)
T ss_pred ccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999976421100 000111233456788999999977666543 57999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 861 VFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 861 l~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.||++++|. +|++++.|+..
T Consensus 167 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~-~G~i~~~~~~~ 231 (243)
T TIGR02315 167 ILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLK-AGEIVFDGAPS 231 (243)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEE-CCEEEecCCHH
Confidence 9999999999999999999999999754 899999999986 4667899999998 58999888753
No 159
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1e-37 Score=342.14 Aligned_cols=203 Identities=19% Similarity=0.300 Sum_probs=172.1
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc------cccceEEEEcCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHS 785 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~~~~ 785 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.++
T Consensus 19 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 19 NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 4579999999999999999999999999999999999876 5689999999876421 2345799999999899
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
+.+|+.||+.+...... ........+.+.++++.+++.+..+..+ ..||||||||++|||+|+.+|++|||||
T Consensus 97 ~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDE 169 (269)
T PRK11831 97 TDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SELSGGMARRAALARAIALEPDLIMFDE 169 (269)
T ss_pred CCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999999987543211 1123334456788899999987766643 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 170 Pt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 228 (269)
T PRK11831 170 PFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVA-DKKIVAHGSA 228 (269)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999765 899999999976 5778899999998 5899998875
No 160
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.7e-38 Score=333.40 Aligned_cols=194 Identities=27% Similarity=0.357 Sum_probs=166.4
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~~~~~ 786 (1065)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999876 568999999987642 124567999999999999
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+|++||+.+....+. ...+...++++++++.+++.+..+... ..||||||||++|||||+.+|++++||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988654332 223344556789999999987666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
|+|||+.++..+.+.|++++++|+|||++||+++ .+...+|++++|.+ |+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999986 56677999999985 55
No 161
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=341.22 Aligned_cols=201 Identities=25% Similarity=0.324 Sum_probs=171.3
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC-CCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 788 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 788 (1065)
+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++. .++..
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 469999999999999999999999999999999999876 568999999987643 234567999999863 44568
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||.||+.|..... ........++++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 96 tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~ 167 (274)
T PRK13647 96 TVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMA 167 (274)
T ss_pred cHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 9999998864322 2233344456889999999987776654 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|+ +|++++.|++
T Consensus 168 ~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 222 (274)
T PRK13647 168 YLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLK-EGRVLAEGDK 222 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999877999999999986 4667899999998 5899999875
No 162
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-38 Score=330.98 Aligned_cols=198 Identities=33% Similarity=0.490 Sum_probs=168.2
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~lt 789 (1065)
++.+|+|+||++++| ++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 12 KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 457999999999999 999999999999999999999876 568999999987543 234567999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
|.||+.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+|
T Consensus 89 v~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~ 160 (211)
T cd03264 89 VREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRRRVGIAQALVGDPSILIVDEPTAG 160 (211)
T ss_pred HHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999988654432 122333456788999999987666543 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 870 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
||+.++..+.+.|+++++ +.|||++||+++ .+.+.+|++++|++ |+++..|
T Consensus 161 LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 161 LDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred CCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999875 599999999986 46678999999984 7887654
No 163
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.4e-38 Score=333.05 Aligned_cols=201 Identities=27% Similarity=0.425 Sum_probs=164.7
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCC--CCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~--~~l 788 (1065)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++. ..++.++|++|++.+. +.+
T Consensus 10 ~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~ 85 (213)
T cd03235 10 GGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPI 85 (213)
T ss_pred CCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCC
Confidence 34579999999999999999999999999999999999876 56899999998653 3456799999998763 347
Q ss_pred CHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 789 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
||+||+.+....... .........++++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||
T Consensus 86 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt 160 (213)
T cd03235 86 SVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPF 160 (213)
T ss_pred cHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 999999875432110 00111233456788999999976666543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 868 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|. +| +++.|
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~-~~-~~~~g 213 (213)
T cd03235 161 AGVDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLN-RT-VVASG 213 (213)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEc-Cc-EeecC
Confidence 999999999999999999777999999999986 5677899999997 45 55543
No 164
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=344.87 Aligned_cols=202 Identities=25% Similarity=0.336 Sum_probs=170.5
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC-------------------------
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR------------------------- 767 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~------------------------- 767 (1065)
..+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKI 97 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceeccccccccccccccccccccccccccc
Confidence 369999999999999999999999999999999999877 46899999986531
Q ss_pred --cccccceEEEEcCCC-CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHH
Q 001507 768 --QETFARISGYCEQND-IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTE 843 (1065)
Q Consensus 768 --~~~~~~~~~~v~q~~-~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgG 843 (1065)
...+++.+|||+|++ ..+...||+||+.|+.... ....++..++++++++.+||. +..++.. ..||||
T Consensus 98 ~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~LSgG 169 (305)
T PRK13651 98 KKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYIELVGLDESYLQRSP-----FELSGG 169 (305)
T ss_pred chHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCh-----hhCCHH
Confidence 123456799999985 3344579999999875432 233445556789999999996 5666543 589999
Q ss_pred HHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 844 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 844 qrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
|||||+||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|+ +|++++.|
T Consensus 170 qkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~-~~~~~adrv~vl~-~G~i~~~g 247 (305)
T PRK13651 170 QKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLD-NVLEWTKRTIFFK-DGKIIKDG 247 (305)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHH-HHHHhCCEEEEEE-CCEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999976 5778899999997 58999999
Q ss_pred CCC
Q 001507 924 PLG 926 (1065)
Q Consensus 924 ~~~ 926 (1065)
++.
T Consensus 248 ~~~ 250 (305)
T PRK13651 248 DTY 250 (305)
T ss_pred CHH
Confidence 863
No 165
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=343.90 Aligned_cols=201 Identities=25% Similarity=0.321 Sum_probs=169.9
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCC-C
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-H 784 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~-~ 784 (1065)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|+++.. ..+++.+|||+|++. .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQ 97 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhhEEEEeeCchhh
Confidence 469999999999999999999999999999999999877 568999999987631 234567999999862 2
Q ss_pred CCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 785 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 785 ~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+...||+||+.|+.... .....+..++++++++.++|. ...++.+ ..|||||||||+|||+|+.+|++|||
T Consensus 98 l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~LSgGq~qrv~lAraL~~~P~llll 169 (290)
T PRK13634 98 LFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSP-----FELSGGQMRRVAIAGVLAMEPEVLVL 169 (290)
T ss_pred hhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 33579999999875432 123344456788999999996 5555543 58999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|++++++ |.|||++||+++ .+.+.+|++++|. +|++++.|++
T Consensus 170 DEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~-~G~i~~~g~~ 230 (290)
T PRK13634 170 DEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMH-KGTVFLQGTP 230 (290)
T ss_pred ECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999765 999999999987 5778899999998 5899999975
No 166
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.2e-37 Score=332.44 Aligned_cols=196 Identities=26% Similarity=0.321 Sum_probs=166.9
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc------cccceEEEEcCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSP 786 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~~~~~ 786 (1065)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... .+++.++|++|++.+++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 579999999999999999999999999999999999876 5689999999875321 24567999999998888
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+|++||+.+....+. ....+..+.++++++.+++.+..++.. ..||||||||++|||||+.+|++|+||||
T Consensus 93 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 164 (222)
T PRK10908 93 DRTVYDNVAIPLIIAG---ASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLSGGEQQRVGIARAVVNKPAVLLADEP 164 (222)
T ss_pred cccHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988654331 223334456788999999977665543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 920 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 920 (1065)
|+|||+.++..+.+.|++++++|.|||++||+++ ++...+|++++|.+ |+++
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 165 TGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 9999999999999999999777899999999986 56677999999985 6754
No 167
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.1e-36 Score=361.86 Aligned_cols=213 Identities=28% Similarity=0.438 Sum_probs=176.1
Q ss_pred ceeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc
Q 001507 685 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 764 (1065)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~ 764 (1065)
+-.++++|++|.+.. .+..+|+|+|++|+|||.+||+|+||||||||+|+|+|+.+ |.+|+|.+||.
T Consensus 469 ~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~dg~ 535 (709)
T COG2274 469 QGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILLDGV 535 (709)
T ss_pred CceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCE
Confidence 457899999988742 23479999999999999999999999999999999999987 67999999999
Q ss_pred cCC---cccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-------cccCcccC
Q 001507 765 PKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGL 834 (1065)
Q Consensus 765 ~~~---~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-------~~~~~~~~ 834 (1065)
++. ...+|+.+|||+||+.++.+ |++||+.++. | ..+. +.+.++++..|..+ -.++.++.
T Consensus 536 dl~~i~~~~lR~~ig~V~Q~~~Lf~g-SI~eNi~l~~----p-~~~~----e~i~~A~~~ag~~~fI~~lP~gy~t~v~E 605 (709)
T COG2274 536 DLNDIDLASLRRQVGYVLQDPFLFSG-SIRENIALGN----P-EATD----EEIIEAAQLAGAHEFIENLPMGYDTPVGE 605 (709)
T ss_pred eHHhcCHHHHHhheeEEcccchhhcC-cHHHHHhcCC----C-CCCH----HHHHHHHHHhCcHHHHHhccccccccccc
Confidence 864 46788999999999988865 9999998752 2 2221 22344444444332 22444444
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe
Q 001507 835 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 914 (1065)
Q Consensus 835 ~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 914 (1065)
. ..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.++. +|+|+|+++|+++ ..+.+|+++||+
T Consensus 606 ~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl~ 681 (709)
T COG2274 606 G-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVLD 681 (709)
T ss_pred C-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEcc
Confidence 3 45799999999999999999999999999999999999999999999975 5899999999976 678899999998
Q ss_pred cCcEEEEeCCC
Q 001507 915 RGGELIYAGPL 925 (1065)
Q Consensus 915 ~gg~~~~~g~~ 925 (1065)
+|+++..|+.
T Consensus 682 -~Gkiv~~gs~ 691 (709)
T COG2274 682 -QGKIVEQGSH 691 (709)
T ss_pred -CCceeccCCH
Confidence 5899999986
No 168
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-38 Score=334.98 Aligned_cols=204 Identities=29% Similarity=0.371 Sum_probs=172.4
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--CCCceEEEEccccccCCCCC
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMT 96 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--~~~~~~~yv~Q~~~~~~~lT 96 (1065)
+.+|+|+||++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999998775 99999999876432 12357999999998899999
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccc
Q 001507 97 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 176 (1065)
Q Consensus 97 v~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 176 (1065)
|+||+.+.....+... .+....++++++.+||++..++.+ .
T Consensus 90 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (220)
T cd03265 90 GWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLV-----K 130 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh-----h
Confidence 9999988643321100 001224788899999987766655 4
Q ss_pred cCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCc
Q 001507 177 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 256 (1065)
Q Consensus 177 ~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~ 256 (1065)
.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++..++|++++|++|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEE-FGMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 69999999999999999999999999999999999999999999998753 25677779999999999999999999999
Q ss_pred EEEEcCcch
Q 001507 257 IVYQGPRVS 265 (1065)
Q Consensus 257 i~~~G~~~~ 265 (1065)
+++.|++++
T Consensus 210 i~~~~~~~~ 218 (220)
T cd03265 210 IIAEGTPEE 218 (220)
T ss_pred EEEeCChHH
Confidence 999987654
No 169
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-38 Score=348.13 Aligned_cols=218 Identities=26% Similarity=0.352 Sum_probs=177.0
Q ss_pred HHhhhhcCCcc--ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-----CC
Q 001507 7 RQLRIYRGNRS--KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~--~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-----~~ 79 (1065)
+++++.++... .+.+|+||||+|++||+++|+||||||||||+++|+|.+.|. +|+|.++|.++.... .+
T Consensus 6 ~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 6 ENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHh
Confidence 44555553221 246999999999999999999999999999999999999876 999999998875421 24
Q ss_pred ceEEEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 80 RTSAYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 80 ~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
+.++||+|++. .+...||+||+.|+....+.. ..+...+++++++
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 128 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMN 128 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHH
Confidence 67999999863 344579999998864322110 0011234788999
Q ss_pred HhCCc--ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEec
Q 001507 159 ILGLD--TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLL 236 (1065)
Q Consensus 159 ~lgL~--~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~ 236 (1065)
.+||. +..|+. ++.||||||||++|||||+.+|++|+|||||+|||+.++.++++.|+++++. .++||++++
T Consensus 129 ~~gL~~~~~~~~~-----~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vt 202 (287)
T PRK13637 129 IVGLDYEDYKDKS-----PFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVS 202 (287)
T ss_pred HcCCCchhhccCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEe
Confidence 99996 445544 4579999999999999999999999999999999999999999999998753 367788899
Q ss_pred CCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 237 QPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 237 ~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
|+.+++..+||+|++|++|++++.|+++++.
T Consensus 203 Hd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 203 HSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999988764
No 170
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-38 Score=335.06 Aligned_cols=212 Identities=29% Similarity=0.380 Sum_probs=174.2
Q ss_pred HHhhhhcCCc-cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEE
Q 001507 7 RQLRIYRGNR-SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYV 85 (1065)
Q Consensus 7 ~~~~~~~~~~-~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv 85 (1065)
+++++.+++. ..+.+|+|+||+|++|++++|+||||||||||+++|+|.+.|. +|+|.++|.++.. .++.++|+
T Consensus 4 ~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v 78 (220)
T cd03293 4 RNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYV 78 (220)
T ss_pred EEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEE
Confidence 3455554331 1156999999999999999999999999999999999998775 9999999987653 34679999
Q ss_pred ccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccc
Q 001507 86 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 165 (1065)
Q Consensus 86 ~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 165 (1065)
+|++.+++.+||+||+.++...++... ......++++++.+||.+.
T Consensus 79 ~q~~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~ 124 (220)
T cd03293 79 FQQDALLPWLTVLDNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGF 124 (220)
T ss_pred ecccccccCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhh
Confidence 999988888999999988643221000 0011237788999999876
Q ss_pred ccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhh
Q 001507 166 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 245 (1065)
Q Consensus 166 ~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~ 245 (1065)
.++.+ ..||||||||++|||||+.+|++++|||||+|||+.++..+++.|+++.+. .+++|++++|+.+++..+
T Consensus 125 ~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~ 198 (220)
T cd03293 125 ENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRE-TGKTVLLVTHDIDEAVFL 198 (220)
T ss_pred hhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHh
Confidence 66554 469999999999999999999999999999999999999999999988643 356777799999999999
Q ss_pred cccEEEec--CCcEEEEcCc
Q 001507 246 FDDVILLS--EGQIVYQGPR 263 (1065)
Q Consensus 246 ~D~v~~l~--~G~i~~~G~~ 263 (1065)
||++++|+ +|++++.++.
T Consensus 199 ~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 199 ADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEEEECCCCEEEEEEEe
Confidence 99999999 7999988865
No 171
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=336.79 Aligned_cols=204 Identities=25% Similarity=0.360 Sum_probs=172.8
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T PRK10895 14 KGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFR 91 (241)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHHhCeEEeccCCcccc
Confidence 34579999999999999999999999999999999999876 568999999987643 123467999999999888
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+|++||+.+....+. .....+....++++++.+++.+..+... +.||||||||++|||+|+.+|++|+||||
T Consensus 92 ~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 164 (241)
T PRK10895 92 RLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGGERRRVEIARALAANPKFILLDEP 164 (241)
T ss_pred cCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 8999999987643221 1122334456788999999876655443 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||+.++..+.+.+++++++|+|||+++|+++ ++.+.+|++++|. +|++++.|+.
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 221 (241)
T PRK10895 165 FAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVS-QGHLIAHGTP 221 (241)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEe-CCeEEeeCCH
Confidence 9999999999999999998877999999999986 5778899999998 5799988875
No 172
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-38 Score=339.89 Aligned_cols=219 Identities=28% Similarity=0.376 Sum_probs=178.0
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAY 84 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~y 84 (1065)
++++++.+++ ..+|+|+|+++++|++++|+||||||||||+++|+|.+.|+ +|+|.++|.++.... .++.++|
T Consensus 5 ~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~ 78 (239)
T cd03296 5 VRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGF 78 (239)
T ss_pred EEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEE
Confidence 3455555532 46999999999999999999999999999999999998775 999999998765432 2357999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
++|++.+++.+||+||+.++........+.+ .......++++++.+||.+
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~ 128 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPP------------------------------EAEIRAKVHELLKLVQLDW 128 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCC------------------------------HHHHHHHHHHHHHHcCChh
Confidence 9999988888999999988643221000000 0001123678899999987
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++..
T Consensus 129 ~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~ 202 (239)
T cd03296 129 LADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDE-LHVTTVFVTHDQEEALE 202 (239)
T ss_pred hhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHH
Confidence 666554 469999999999999999999999999999999999999999999998753 35677779999999999
Q ss_pred hcccEEEecCCcEEEEcCcchH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+||++++|++|++++.|+++++
T Consensus 203 ~~d~i~~l~~G~i~~~~~~~~~ 224 (239)
T cd03296 203 VADRVVVMNKGRIEQVGTPDEV 224 (239)
T ss_pred hCCEEEEEECCeEEEecCHHHH
Confidence 9999999999999999987765
No 173
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-38 Score=301.82 Aligned_cols=219 Identities=24% Similarity=0.335 Sum_probs=184.8
Q ss_pred HHHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEE
Q 001507 5 LLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAY 84 (1065)
Q Consensus 5 ~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~y 84 (1065)
.+.+++..+.++. +.+|+|+|++|.+||.++++||||||||||||+++|+..|. .|+|.+||++++-.. ..-|.
T Consensus 5 ~~~~~sl~y~g~~-~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gPg--aergv 78 (259)
T COG4525 5 NVSHLSLSYEGKP-RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGPG--AERGV 78 (259)
T ss_pred ehhheEEecCCcc-hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCCC--cccee
Confidence 3556666665543 67999999999999999999999999999999999999876 999999999876433 23499
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
|+|++.++|-+||.||+.|+.++++..+. +....+.+.+...||++
T Consensus 79 VFQ~~~LlPWl~~~dNvafgL~l~Gi~k~----------------------------------~R~~~a~q~l~~VgL~~ 124 (259)
T COG4525 79 VFQNEALLPWLNVIDNVAFGLQLRGIEKA----------------------------------QRREIAHQMLALVGLEG 124 (259)
T ss_pred EeccCccchhhHHHHHHHHHHHhcCCCHH----------------------------------HHHHHHHHHHHHhCccc
Confidence 99999999999999999999998875421 11234778899999988
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..+. ++-+|||||||||.|||||+.+|+.|+||||+++||+-+++++.+.|-++.+.. ++-++.+||+.+|+.-
T Consensus 125 ~~~~-----~i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~t-gk~~lliTH~ieEAlf 198 (259)
T COG4525 125 AEHK-----YIWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQET-GKQVLLITHDIEEALF 198 (259)
T ss_pred cccc-----ceEeecchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHh-CCeEEEEeccHHHHHh
Confidence 6654 456799999999999999999999999999999999999999999998887764 4556669999999999
Q ss_pred hcccEEEecC--CcEEEEcCcchHHHH
Q 001507 245 LFDDVILLSE--GQIVYQGPRVSVLDF 269 (1065)
Q Consensus 245 ~~D~v~~l~~--G~i~~~G~~~~~~~~ 269 (1065)
+++++++|+- |+|+..=++.-...|
T Consensus 199 latrLvvlsp~pgRvv~~~~~df~rR~ 225 (259)
T COG4525 199 LATRLVVLSPGPGRVVERLPLDFARRY 225 (259)
T ss_pred hhheeEEecCCCceeeEecCCCHHHHh
Confidence 9999999974 899988777644443
No 174
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8.6e-38 Score=331.14 Aligned_cols=192 Identities=28% Similarity=0.384 Sum_probs=162.5
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC-CCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 788 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 788 (1065)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 579999999999999999999999999999999999876 568999999987542 234567999999974 35678
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
|++||+.+....+. .......+.++++++.+++.+..++.. ..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENLG---LPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987643221 122333456788999999976666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEec
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 915 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 915 (1065)
|||+.++..+.+.|++++++|+|||++||+++ ++...||++++|.+
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~ 209 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLED 209 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC
Confidence 99999999999999999877999999999986 56677999999985
No 175
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=8.1e-38 Score=331.97 Aligned_cols=196 Identities=27% Similarity=0.371 Sum_probs=166.6
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-----ccccceEEEEcCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~~~~ 786 (1065)
++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 12 ~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 12 DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 4579999999999999999999999999999999999876 568999999987632 234567999999999999
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+|++||+.+...... .....+..+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+||||
T Consensus 90 ~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP 162 (213)
T cd03262 90 HLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMNPKVMLFDEP 162 (213)
T ss_pred CCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999987642111 1223334556788999999977666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
|+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |+
T Consensus 163 ~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 163 TSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred ccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999877899999999986 56778999999985 55
No 176
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.6e-37 Score=325.33 Aligned_cols=188 Identities=20% Similarity=0.297 Sum_probs=145.7
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCC--CCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND--IHSPGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~--~~~~~l 788 (1065)
+.++++++++|-|.--..+||+||||.||||||++|.|... +..|+..-| .+-.+|+..|.. .+...-
T Consensus 598 gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~--P~~GE~RKn--------hrL~iG~FdQh~~E~L~~Ee 667 (807)
T KOG0066|consen 598 GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLD--PNDGELRKN--------HRLRIGWFDQHANEALNGEE 667 (807)
T ss_pred CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCC--CCcchhhcc--------ceeeeechhhhhHHhhcccc
Confidence 56788999999999999999999999999999999999877 456765433 233588888864 345566
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
|.-|.|.-. . +.+.. .....+-.+||...++++- +..||||||-||++|-.-+..|+||||||||+
T Consensus 668 tp~EyLqr~--F----Nlpyq----~ARK~LG~fGL~sHAHTik----ikdLSGGQKaRValaeLal~~PDvlILDEPTN 733 (807)
T KOG0066|consen 668 TPVEYLQRK--F----NLPYQ----EARKQLGTFGLASHAHTIK----IKDLSGGQKARVALAELALGGPDVLILDEPTN 733 (807)
T ss_pred CHHHHHHHh--c----CCChH----HHHHHhhhhhhhhccceEe----eeecCCcchHHHHHHHHhcCCCCEEEecCCCC
Confidence 777777421 1 11222 2356778888888887753 46799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+||.++...+-+.|++. ...||+++||-+. +.+.-..+.|+.+.|.-...|...
T Consensus 734 NLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eIdGdFe 787 (807)
T KOG0066|consen 734 NLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEIDGDFE 787 (807)
T ss_pred CcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhccccHH
Confidence 99999999999999885 5689999999763 445556778887766655666553
No 177
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-38 Score=342.03 Aligned_cols=214 Identities=22% Similarity=0.304 Sum_probs=177.8
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-------CCc
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPR 80 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-------~~~ 80 (1065)
+++..++ ...+|+|+||++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++
T Consensus 29 ~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 29 EILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcC
Confidence 4444443 346899999999999999999999999999999999999775 999999998765421 134
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+||+||+.+.....+.. . ......++++++.+
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~---~-------------------------------~~~~~~~~~~l~~~ 148 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVP---R-------------------------------AEREERAAEALELV 148 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCC---H-------------------------------HHHHHHHHHHHHHc
Confidence 6999999999898999999998864322100 0 00112367889999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..++.++ .|||||||||+|||||+.+|+|+||||||+|||+.++..+.+.|+++++. .+++|++++|+.+
T Consensus 149 ~l~~~~~~~~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~ 222 (269)
T cd03294 149 GLEGWEHKYPD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLD 222 (269)
T ss_pred CCHhHhhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHH
Confidence 99877776654 69999999999999999999999999999999999999999999998653 3567778999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++.++||++++|++|++++.|+++++.
T Consensus 223 ~~~~~~d~v~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 223 EALRLGDRIAIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999887664
No 178
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-38 Score=301.13 Aligned_cols=200 Identities=28% Similarity=0.386 Sum_probs=177.7
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHH
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 792 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 792 (1065)
+.+|+|+|++|.+||.++++||||||||||||+++|..+ +..|+|.+||++++... ..-|.|+|++.++|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCC--ccceeEeccCccchhhHHHH
Confidence 459999999999999999999999999999999999988 56899999999875432 22489999999999999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCH
Q 001507 793 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 872 (1065)
Q Consensus 793 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~ 872 (1065)
|+.|+.+++. +.+.++.+++.+.+..+||.+..++.+ .+||||||||+.|||||..+|++|+||||++.||.
T Consensus 94 NvafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 9999988874 567888899999999999998887765 58999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEec-CcEEEEeCCC
Q 001507 873 RAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 925 (1065)
Q Consensus 873 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~-gg~~~~~g~~ 925 (1065)
-++++++++|-++++ .|+.++++||+.+ +..-.++++++|+. .|+++..-++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCC
Confidence 999999999999875 4999999999987 45556899999983 2688877665
No 179
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-38 Score=364.77 Aligned_cols=214 Identities=25% Similarity=0.436 Sum_probs=179.7
Q ss_pred ceeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc
Q 001507 685 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 764 (1065)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~ 764 (1065)
.-.++|+|+++.++. .++.+||+|+||+|+|||.+||+||||+||||+.++|-.... |.+|+|.+||+
T Consensus 463 ~G~IeF~~VsFaYP~----------Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPT----------RPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCC----------CCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCe
Confidence 346899999998864 346789999999999999999999999999999999998876 67999999999
Q ss_pred cCCc---ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHH-------cCCCccccCcccC
Q 001507 765 PKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMEL-------VELTSLSGALIGL 834 (1065)
Q Consensus 765 ~~~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-------l~l~~~~~~~~~~ 834 (1065)
|+.+ ..+++.+|+|.|+|.+|.. |++|||.|+.. ..+.++ ++.+.+. .++.+-.|+.+|.
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs~-sI~eNI~YG~~-----~~t~e~----i~~AAk~ANah~FI~~~p~gY~T~VGE 600 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFSG-SIRENIAYGLD-----NATDEE----IEAAAKMANAHEFITNFPDGYNTVVGE 600 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeecc-cHHHHHhcCCC-----CCCHHH----HHHHHHHhChHHHHHhCccccccccCC
Confidence 8754 5578899999999999965 99999999753 223222 2222222 2345556777876
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe
Q 001507 835 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 914 (1065)
Q Consensus 835 ~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 914 (1065)
.+ ..||||||||++|||||++||+||||||+||+||.++...|++.|.++.+ ++|||+|+|+++ ..+.+|+|++++
T Consensus 601 kG-~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~ 676 (716)
T KOG0058|consen 601 KG-SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVID 676 (716)
T ss_pred cc-ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEc
Confidence 54 47999999999999999999999999999999999999999999998764 699999999975 678899999998
Q ss_pred cCcEEEEeCCC
Q 001507 915 RGGELIYAGPL 925 (1065)
Q Consensus 915 ~gg~~~~~g~~ 925 (1065)
+|+++..|..
T Consensus 677 -~G~V~E~G~h 686 (716)
T KOG0058|consen 677 -KGRVVEMGTH 686 (716)
T ss_pred -CCeEEecccH
Confidence 5899999964
No 180
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=336.76 Aligned_cols=206 Identities=21% Similarity=0.287 Sum_probs=174.0
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.+.++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 12 ~l~i~~l~~~~-------------~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRY-------------GERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEE-------------CCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 36677776554 33569999999999999999999999999999999999876 5689999999764
Q ss_pred CcccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHH
Q 001507 767 RQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRK 846 (1065)
Q Consensus 767 ~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 846 (1065)
. .+++.++|++|++.+++.+||+||+.+... . ...+++.++++.+++.+..+... ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 345679999999988888999999987421 0 12345788999999987666543 579999999
Q ss_pred HHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 847 RLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 847 r~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ .|+|||++||+++ .+...+|++++|. +|++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~-~G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIE-EGKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999986 4677899999998 4789887764
No 181
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-37 Score=341.11 Aligned_cols=201 Identities=27% Similarity=0.359 Sum_probs=170.7
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCC--C
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 783 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~--~ 783 (1065)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|+++|.++.. ..+++.+|||+|++ .
T Consensus 19 ~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 19 SRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 359999999999999999999999999999999999877 568999999987631 23466799999986 4
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
++. .||.|++.|+.... .....+..+++.++++.++|. +..++. +..||||||||++|||+|+.+|++||
T Consensus 97 l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~~LSgGqkqrvaiA~aL~~~p~ill 167 (288)
T PRK13643 97 LFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----PFELSGGQMRRVAIAGILAMEPEVLV 167 (288)
T ss_pred ccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----cccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 444 69999999875432 123445566788999999995 355543 35899999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.||++++|. +|++++.|++.
T Consensus 168 LDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~-~G~i~~~g~~~ 229 (288)
T PRK13643 168 LDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLE-KGHIISCGTPS 229 (288)
T ss_pred EECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 99999999999999999999999877999999999986 5678899999998 58999999863
No 182
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-38 Score=337.63 Aligned_cols=217 Identities=24% Similarity=0.357 Sum_probs=178.3
Q ss_pred HHhhhhcCCc-cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CC
Q 001507 7 RQLRIYRGNR-SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PP 79 (1065)
Q Consensus 7 ~~~~~~~~~~-~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~ 79 (1065)
+++++.++++ ...++|+|+||++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .+
T Consensus 5 ~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 5 KNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred ecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHH
Confidence 4555555432 1136999999999999999999999999999999999999875 999999998875432 13
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++.+|++||+.+.....+... ......++++++.
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~ 127 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLEL 127 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHH
Confidence 569999999998999999999988643221000 0011236788999
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+||++..++.+ ..|||||||||+||||++.+|++++|||||+|||+.++..+.+.|+++++. ++++|++++|+.
T Consensus 128 ~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~ 201 (233)
T cd03258 128 VGLEDKADAYP-----AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEM 201 (233)
T ss_pred CCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCH
Confidence 99987666544 469999999999999999999999999999999999999999999998653 356777799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+++..++|++++|++|++++.|+.+++
T Consensus 202 ~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (233)
T cd03258 202 EVVKRICDRVAVMEKGEVVEEGTVEEV 228 (233)
T ss_pred HHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999987665
No 183
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.2e-38 Score=294.96 Aligned_cols=199 Identities=30% Similarity=0.406 Sum_probs=171.2
Q ss_pred ccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCC
Q 001507 710 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND 782 (1065)
Q Consensus 710 ~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~ 782 (1065)
.+...||++|++.|++||.+||+|||||||||||-+|+|+.. +.+|+|.+.|++... ..+.+.+|||+|..
T Consensus 20 ~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF 97 (228)
T COG4181 20 EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSF 97 (228)
T ss_pred CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEee
Confidence 356789999999999999999999999999999999999987 569999999988642 12456899999999
Q ss_pred CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 783 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 783 ~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
.+.|+||..||+.....++... .........+.++.+||.+-.+... .+|||||+|||+||||++..|+|||
T Consensus 98 ~Lip~ltAlENV~lPleL~ge~---~~~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLf 169 (228)
T COG4181 98 HLIPNLTALENVALPLELRGES---SADSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLF 169 (228)
T ss_pred eccccchhhhhccchhhhcCCc---cccHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEe
Confidence 9999999999999888777532 1223345678899999987665543 5899999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 921 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 921 (1065)
.||||-+||.++...|.+++-.+.+ .|.|.|++||||. +...|||++-|.. |+++.
T Consensus 170 ADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 170 ADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 9999999999999999999999864 4999999999985 6678999999985 78764
No 184
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.7e-38 Score=348.16 Aligned_cols=215 Identities=28% Similarity=0.367 Sum_probs=178.9
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC--CCceEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAY 84 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~--~~~~~~y 84 (1065)
+++++.++ +..+|+|+||++++|++++|+|||||||||||++|+|.+.|+ +|+|.++|.++.... .++.++|
T Consensus 8 ~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~ 81 (303)
T TIGR01288 8 VGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGV 81 (303)
T ss_pred EeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEE
Confidence 44555443 246999999999999999999999999999999999998775 999999998764321 2467999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
++|++.+++.+||+||+.+.....+... ......++++++.+||.+
T Consensus 82 v~q~~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~ 127 (303)
T TIGR01288 82 VPQFDNLDPEFTVRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLES 127 (303)
T ss_pred EeccccCCcCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChh
Confidence 9999988899999999986443221000 001123677889999988
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..++.++ .|||||||||+||+||+.+|++++|||||+|||+.++..+++.|+++++ .+++|++++|+.+++.+
T Consensus 128 ~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~til~~sH~~~~~~~ 200 (303)
T TIGR01288 128 KADVRVA-----LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAER 200 (303)
T ss_pred HhcCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHH
Confidence 7777654 5999999999999999999999999999999999999999999999865 35677789999999999
Q ss_pred hcccEEEecCCcEEEEcCcchHHH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
+||++++|++|++++.|+++++..
T Consensus 201 ~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 201 LCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred hCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999888753
No 185
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.7e-37 Score=337.12 Aligned_cols=202 Identities=22% Similarity=0.316 Sum_probs=171.4
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----------------ccccceE
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----------------ETFARIS 775 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~~ 775 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+
T Consensus 17 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 17 EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 4579999999999999999999999999999999999876 568999999986531 1345679
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHhh-ccCCCCCCHHHHHHHHHHHHHHcCCCccc-cCcccCCCCCCCCHHHHHHHHHHHH
Q 001507 776 GYCEQNDIHSPGLTVLESLLFSAW-LRLPSEIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVE 853 (1065)
Q Consensus 776 ~~v~q~~~~~~~ltv~e~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lSgGqrqr~~ia~~ 853 (1065)
+|++|++.+++.+|++||+.+... .. ........+++.++++.+++.+.. +.. ...||||||||++||||
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~G~~qrv~lara 166 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQGKY-----PVHLSGGQQQRVSIARA 166 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHH
Confidence 999999999999999999987542 21 122344456678899999997653 433 35799999999999999
Q ss_pred HHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 854 LVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 854 l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+...||++++|.+ |++++.|+.
T Consensus 167 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 167 LAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSHVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999999999877999999999986 56678999999984 899988874
No 186
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.1e-37 Score=329.47 Aligned_cols=198 Identities=25% Similarity=0.376 Sum_probs=170.9
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 791 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~ 791 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.... .+.++|++|++.+++.+|++
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 12 KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 4579999999999999999999999999999999999876 56899999998764322 25699999999888889999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCC
Q 001507 792 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 871 (1065)
Q Consensus 792 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD 871 (1065)
||+.+....+. .. .+.+.++++.+++.+..+... ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 89 ~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~LD 156 (223)
T TIGR03740 89 ENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLD 156 (223)
T ss_pred HHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCC
Confidence 99987654331 11 234678899999987766543 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 872 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 872 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|. +|++++.|++.
T Consensus 157 ~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~~ 209 (223)
T TIGR03740 157 PIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIIS-EGVLGYQGKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEe-CCEEEEecChh
Confidence 99999999999999777999999999986 5678899999998 58999998864
No 187
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.8e-37 Score=333.15 Aligned_cols=200 Identities=25% Similarity=0.310 Sum_probs=163.5
Q ss_pred eEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCC--CCC
Q 001507 714 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHS 785 (1065)
Q Consensus 714 ~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~--~~~ 785 (1065)
.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++ .++
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999876 568999999987643 23456799999998 466
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeec
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 864 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lD 864 (1065)
+.+||+||+.+........ .........++++++.+++. ...+... ..||||||||++|||+|+.+|++|+||
T Consensus 97 ~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRYP-----HELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCCc-----hhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 7899999998765433211 11111122235788888884 4444433 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 865 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 865 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
|||+|||+.++..+.+.|++++++ |+|||++||+++ .+...+|++++|. +|+++..|
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g 228 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMY-AGKIVEEG 228 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEe-CCEEEecC
Confidence 999999999999999999999765 899999999986 5666899999998 57887654
No 188
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.9e-38 Score=335.83 Aligned_cols=206 Identities=24% Similarity=0.339 Sum_probs=169.3
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPR 80 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~ 80 (1065)
+++++.+++. .+.+|+|+|+++++|++++|+||||||||||+++|+|.+.|. +|+|.++|.++.... .++
T Consensus 5 ~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 5 EQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred EEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHH
Confidence 4455554321 246999999999999999999999999999999999998775 999999998765321 235
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+||+||+.++....+... ...+.+++++++.+
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~ 126 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKV 126 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHc
Confidence 79999999998999999999988654221000 00122477889999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..++.+ .+|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. +.+|++++|+.+
T Consensus 127 ~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~vsH~~~ 199 (216)
T TIGR00960 127 GLEGKAHALP-----MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRR--GTTVLVATHDIN 199 (216)
T ss_pred CChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 9987766554 469999999999999999999999999999999999999999999988642 566777999999
Q ss_pred HHHhhcccEEEecCCcE
Q 001507 241 EAYELFDDVILLSEGQI 257 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i 257 (1065)
++..+||++++|++|++
T Consensus 200 ~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 200 LVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhCCEEEEEeCCcC
Confidence 99999999999999975
No 189
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-37 Score=344.04 Aligned_cols=218 Identities=22% Similarity=0.311 Sum_probs=178.2
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.+.++|+++.++.. ....+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 21 ~l~~~nl~~~y~~~--------~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEK--------QENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 47788887766310 0012469999999999999999999999999999999999877 5689999999765
Q ss_pred Cc-------------------ccccceEEEEcCCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC
Q 001507 767 RQ-------------------ETFARISGYCEQND--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT 825 (1065)
Q Consensus 767 ~~-------------------~~~~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~ 825 (1065)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ....++..+++.++++.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23467799999986 3554 59999998865322 123344456788899999996
Q ss_pred -ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHH
Q 001507 826 -SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIF 904 (1065)
Q Consensus 826 -~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 904 (1065)
+..+.. +..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455543 3579999999999999999999999999999999999999999999999777999999999976 466
Q ss_pred HhcCeEEEEecCcEEEEeCCC
Q 001507 905 ESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 905 ~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+.+|++++|. +|+++..|+.
T Consensus 241 ~~adri~vl~-~G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMD-KGKILKTGTP 260 (320)
T ss_pred HhCCEEEEEE-CCEEEEeCCH
Confidence 8899999998 5899999975
No 190
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=351.23 Aligned_cols=203 Identities=24% Similarity=0.300 Sum_probs=175.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c----ccceEEEEcCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T----FARISGYCEQNDI 783 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~~~v~q~~~ 783 (1065)
+...+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . +++.+|||+|++.
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 44568999999999999999999999999999999999877 5689999999876431 1 2357999999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++.+||+||+.|....+. ....+..++++++++.++|.+..++.+ ..|||||||||+|||||+.+|++|||
T Consensus 117 l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLL 188 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLM 188 (400)
T ss_pred CCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999998765432 223444567889999999987776654 58999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|. +|+++..|++
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~-~G~i~~~g~~ 249 (400)
T PRK10070 189 DEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQ-NGEVVQVGTP 249 (400)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEE-CCEEEecCCH
Confidence 999999999999999999999975 4899999999986 5778899999998 5899998875
No 191
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.6e-37 Score=331.79 Aligned_cols=201 Identities=27% Similarity=0.415 Sum_probs=169.7
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~lt 789 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ....+.++|++|++.+++.+|
T Consensus 13 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 13 ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 4579999999999999999999999999999999999876 568999999987532 122357999999998888999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
++||+.+....+. .......+.++++++.+++.+..++.. ..||||||||++|||||+.+|++|+|||||+|
T Consensus 91 ~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~~~ 162 (236)
T TIGR03864 91 VRQNLRYHAALHG---LSRAEARERIAALLARLGLAERADDKV-----RELNGGHRRRVEIARALLHRPALLLLDEPTVG 162 (236)
T ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccC
Confidence 9999987654321 223334456788999999987666543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 870 LDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+.++..+.+.|+++++ +|+|||++||+++ .+ ..+|++++|. +|++++.|+.
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~-~G~i~~~~~~ 216 (236)
T TIGR03864 163 LDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLH-RGRVLADGAA 216 (236)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEe-CCeEEEeCCH
Confidence 999999999999999975 5899999999986 34 4599999998 5789888764
No 192
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7.4e-38 Score=332.15 Aligned_cols=209 Identities=30% Similarity=0.387 Sum_probs=173.0
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYV 85 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~yv 85 (1065)
+++++.+++ ..+|+|+||++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|+
T Consensus 4 ~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 4 ENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred EeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEE
Confidence 345555433 36999999999999999999999999999999999998775 999999998875432 23579999
Q ss_pred ccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccc
Q 001507 86 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 165 (1065)
Q Consensus 86 ~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 165 (1065)
+|++.+++..||+||+.++....+.. . .+.+..++++++.+||.+.
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~ 123 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVP--K--------------------------------DEIDERVREVAELLQIEHL 123 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHH
Confidence 99998888899999998764322100 0 0012236788999999877
Q ss_pred ccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhh
Q 001507 166 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 245 (1065)
Q Consensus 166 ~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~ 245 (1065)
.++.+ +.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++. .+.+|++++|+.+++..+
T Consensus 124 ~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~sH~~~~~~~~ 197 (213)
T cd03301 124 LDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQR-LGTTTIYVTHDQVEAMTM 197 (213)
T ss_pred HhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHh
Confidence 66655 469999999999999999999999999999999999999999999998753 256777799999999999
Q ss_pred cccEEEecCCcEEEEc
Q 001507 246 FDDVILLSEGQIVYQG 261 (1065)
Q Consensus 246 ~D~v~~l~~G~i~~~G 261 (1065)
+|++++|++|++++.|
T Consensus 198 ~d~i~~l~~g~~~~~g 213 (213)
T cd03301 198 ADRIAVMNDGQIQQIG 213 (213)
T ss_pred cCeEEEEECCEEEecC
Confidence 9999999999999876
No 193
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1e-37 Score=336.67 Aligned_cols=223 Identities=26% Similarity=0.354 Sum_probs=177.9
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC----CceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~----~~~~ 82 (1065)
+++++.++ +..+|+|+|+++++|++++|+|||||||||||++|+|+++|. +|+|.++|.++..... ++.+
T Consensus 4 ~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 4 RGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred eeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCE
Confidence 44555543 246999999999999999999999999999999999998775 9999999988754321 3459
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+|++|++.+++.+||+||+.++............ . . . .........++++++.+||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~----~--------~-~-----------~~~~~~~~~~~~~l~~~~l 133 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLA----R--------A-R-----------REEREARERAEELLERVGL 133 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccc----c--------c-c-----------ccHHHHHHHHHHHHHHcCc
Confidence 9999999999999999999886532210000000 0 0 0 0000112347888999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++..++.+ +.|||||||||+|||||+.+|++++|||||+|||+.++..+++.|+++++ .+++|++++|+.+++
T Consensus 134 ~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~vsH~~~~~ 206 (236)
T cd03219 134 ADLADRPA-----GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE--RGITVLLVEHDMDVV 206 (236)
T ss_pred cchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHH
Confidence 87666554 46999999999999999999999999999999999999999999999865 356777799999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
..+||++++|++|++++.|+++++
T Consensus 207 ~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 207 MSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHhCCEEEEEeCCEEEeecCHHHh
Confidence 999999999999999999987765
No 194
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.9e-37 Score=334.92 Aligned_cols=203 Identities=27% Similarity=0.343 Sum_probs=169.4
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 13 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 92 (247)
T TIGR00972 13 EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPN 92 (247)
T ss_pred CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcc
Confidence 456999999999999999999999999999999999987621 128999999987642 234567999999988
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC----ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT----SLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~----~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
+++ +|++||+.+....+. .....+..+.++++++.+++. +..+.. +..||||||||++|||||+.+|+
T Consensus 93 ~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~ 164 (247)
T TIGR00972 93 PFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS-----ALGLSGGQQQRLCIARALAVEPE 164 (247)
T ss_pred cCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC-----cccCCHHHHHHHHHHHHHhcCCC
Confidence 888 999999998654331 112334456678899999997 444433 35899999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++...+|++++|++ |++++.|+.
T Consensus 165 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (247)
T TIGR00972 165 VLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD-GELVEYGPT 227 (247)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999876 489999999986 57788999999984 799988875
No 195
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-38 Score=346.22 Aligned_cols=219 Identities=21% Similarity=0.302 Sum_probs=176.8
Q ss_pred HHHhhhhcCCcc--ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-------
Q 001507 6 LRQLRIYRGNRS--KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF------- 76 (1065)
Q Consensus 6 ~~~~~~~~~~~~--~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~------- 76 (1065)
++++++.++... ..++|+|||++|++||+++|+||||||||||+++|+|.+.|+ +|+|.++|+++...
T Consensus 5 ~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 5 FQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHH
Confidence 345555554321 246999999999999999999999999999999999999775 99999999987421
Q ss_pred CCCceEEEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHH
Q 001507 77 VPPRTSAYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY 155 (1065)
Q Consensus 77 ~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 155 (1065)
..++.++||+|++. .+...||+||+.|+....+.. . .+....+++
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~ 127 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVS-E---------------------------------EDAKQKARE 127 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHH
Confidence 12357999999862 233579999999864422110 0 001224788
Q ss_pred HHHHhCCc-ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEE
Q 001507 156 IMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVIS 234 (1065)
Q Consensus 156 ~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~ 234 (1065)
+++.+||. +..++. ++.|||||||||+|||||+.+|+++||||||+|||+.++..+++.|+++++. .++||++
T Consensus 128 ~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tvii 201 (290)
T PRK13634 128 MIELVGLPEELLARS-----PFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVL 201 (290)
T ss_pred HHHHCCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEE
Confidence 99999996 455554 4569999999999999999999999999999999999999999999998654 3567778
Q ss_pred ecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 235 LLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 235 ~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|+.+++..+||+|++|++|++++.|+++++.
T Consensus 202 itHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 234 (290)
T PRK13634 202 VTHSMEDAARYADQIVVMHKGTVFLQGTPREIF 234 (290)
T ss_pred EeCCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999987764
No 196
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-37 Score=340.46 Aligned_cols=200 Identities=22% Similarity=0.344 Sum_probs=169.6
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCC--C
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 783 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~--~ 783 (1065)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+|||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQ 97 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhheEEEecChHhc
Confidence 469999999999999999999999999999999999877 568999999987632 23466799999986 3
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
+++ .||.||+.|+.... .....+..++++++++.+||. +..++. +..||||||||++|||+|+.+|++|+
T Consensus 98 l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~laraL~~~p~ill 168 (286)
T PRK13646 98 LFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----PFQMSGGQMRKIAIVSILAMNPDIIV 168 (286)
T ss_pred cch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 444 59999999875332 223344556788999999996 555543 35899999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|. +|++++.|++
T Consensus 169 lDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~-~G~i~~~g~~ 230 (286)
T PRK13646 169 LDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMK-EGSIVSQTSP 230 (286)
T ss_pred EECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999975 4899999999986 5678899999998 5899999875
No 197
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=341.77 Aligned_cols=201 Identities=25% Similarity=0.313 Sum_probs=170.2
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCC-C
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-H 784 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~-~ 784 (1065)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQ 97 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhceEEEEeChhhh
Confidence 469999999999999999999999999999999999877 568999999987632 234567999999863 2
Q ss_pred CCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 785 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 785 ~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+..+||.||+.|...... ...++..++++++++.+++. +..++.. ..||||||||++|||+|+.+|++|||
T Consensus 98 ~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lLlL 169 (287)
T PRK13641 98 LFENTVLKDVEFGPKNFG---FSEDEAKEKALKWLKKVGLSEDLISKSP-----FELSGGQMRRVAIAGVMAYEPEILCL 169 (287)
T ss_pred hccchHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 335899999988654321 23344456788999999996 5666543 58999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|++++++|.|||++||+++ .+.+.||++++|+ +|++++.|+.
T Consensus 170 DEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 229 (287)
T PRK13641 170 DEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLE-HGKLIKHASP 229 (287)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999777999999999986 5778899999998 5899998875
No 198
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-37 Score=338.65 Aligned_cols=215 Identities=26% Similarity=0.362 Sum_probs=178.4
Q ss_pred EEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 001507 688 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR 767 (1065)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~ 767 (1065)
+.++|+++.+. +++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 6 l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~~ 71 (283)
T PRK13636 6 LKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPID 71 (283)
T ss_pred EEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 56677665541 13569999999999999999999999999999999999877 56899999998763
Q ss_pred -----cccccceEEEEcCCCC-CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCC
Q 001507 768 -----QETFARISGYCEQNDI-HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLS 841 (1065)
Q Consensus 768 -----~~~~~~~~~~v~q~~~-~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lS 841 (1065)
...+++.+||++|++. .+...|++||+.+..... ..+..+..++++++++.++|.+..++.. +.||
T Consensus 72 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 143 (283)
T PRK13636 72 YSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCLS 143 (283)
T ss_pred CCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccCC
Confidence 1235567999999874 334579999998864322 1233444567889999999987776653 5899
Q ss_pred HHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 001507 842 TEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELI 920 (1065)
Q Consensus 842 gGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 920 (1065)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...||++++|++ |+++
T Consensus 144 ~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i~ 221 (283)
T PRK13636 144 FGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRVI 221 (283)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 46678999999985 7999
Q ss_pred EeCCCC
Q 001507 921 YAGPLG 926 (1065)
Q Consensus 921 ~~g~~~ 926 (1065)
+.|+..
T Consensus 222 ~~g~~~ 227 (283)
T PRK13636 222 LQGNPK 227 (283)
T ss_pred EeCCHH
Confidence 999863
No 199
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-37 Score=339.40 Aligned_cols=200 Identities=25% Similarity=0.328 Sum_probs=171.7
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC-CCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 788 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 788 (1065)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+|||+|++. .++..
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 459999999999999999999999999999999999877 568999999987643 234567999999973 66778
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||+||+.|..... ....++..++++++++.++|.+..+..+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 98 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~ 169 (279)
T PRK13650 98 TVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSGGQKQRVAIAGAVAMRPKIIILDEATS 169 (279)
T ss_pred cHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcc
Confidence 9999999865432 2234445567899999999987766654 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+.++..+++.|++++++ |+|||++||+++ .+ ..+|++++|. +|+++..|++
T Consensus 170 ~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~-~G~i~~~g~~ 224 (279)
T PRK13650 170 MLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMK-NGQVESTSTP 224 (279)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999865 999999999986 34 5799999998 5899998875
No 200
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.5e-37 Score=342.48 Aligned_cols=204 Identities=23% Similarity=0.267 Sum_probs=172.7
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc------cccceEEEEcCCC--C
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQND--I 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~--~ 783 (1065)
...+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++... .+++.++||+|++ .
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 3579999999999999999999999999999999999877 4689999999876421 2456799999997 5
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
++|.+||.|++.+......+ ....++..+++.++++.+++. +..++. +..|||||||||+|||||+.+|++||
T Consensus 111 l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p~~LSgG~~QRv~iArAL~~~P~lli 184 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----PHEFSGGQCQRIGIARALILEPKLII 184 (331)
T ss_pred cCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 78899999999886543211 123445566788999999994 344443 35899999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+||||+|||+.++..++++|+++.++ |.|||++|||++ .+.+.+|++++|. +|+++..|+.
T Consensus 185 lDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~-~G~ive~g~~ 246 (331)
T PRK15079 185 CDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMY-LGHAVELGTY 246 (331)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 99999999999999999999999764 999999999986 4667899999998 5899999975
No 201
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-38 Score=343.82 Aligned_cols=218 Identities=22% Similarity=0.305 Sum_probs=178.5
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.+++.....+|+|+|++|++||+++|+||||||||||+++|+|.+.|. +|+|.++|.++.... .++.+
T Consensus 7 ~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 7 VKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred EEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhc
Confidence 355666664332346999999999999999999999999999999999999875 999999998875432 23579
Q ss_pred EEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 83 AYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 83 ~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
+|++|++. +++..||+|||.|+....+.. ..+....++++++.+|
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 129 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIP----------------------------------HEEMKERVNEALELVG 129 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCC
Confidence 99999974 677789999998864322110 0011234788999999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|++..+..+ ..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++++. .++||++++|+.++
T Consensus 130 L~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tilivtH~~~~ 203 (279)
T PRK13650 130 MQDFKEREP-----ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDD-YQMTVISITHDLDE 203 (279)
T ss_pred CHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHH
Confidence 987766554 469999999999999999999999999999999999999999999998753 35677779999998
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+ ..||++++|++|+++..|+++++.
T Consensus 204 ~-~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 204 V-ALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred H-HhCCEEEEEECCEEEEECCHHHHH
Confidence 8 589999999999999999987764
No 202
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8.1e-38 Score=329.42 Aligned_cols=202 Identities=29% Similarity=0.335 Sum_probs=166.6
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVS 86 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~ 86 (1065)
+++++.+++. +.+|+|+||++++|++++|+|||||||||||++|+|.+.|+ +|+|.++|.++.....++.++|++
T Consensus 3 ~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~ 77 (205)
T cd03226 3 ENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVM 77 (205)
T ss_pred ccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEe
Confidence 3455554321 46999999999999999999999999999999999998775 999999998765433345799999
Q ss_pred cccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccc
Q 001507 87 QQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 165 (1065)
Q Consensus 87 Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 165 (1065)
|++. .+..+||+||+.++..... .....++++++.+||.+.
T Consensus 78 q~~~~~~~~~tv~e~l~~~~~~~~--------------------------------------~~~~~~~~~l~~~~l~~~ 119 (205)
T cd03226 78 QDVDYQLFTDSVREELLLGLKELD--------------------------------------AGNEQAETVLKDLDLYAL 119 (205)
T ss_pred cChhhhhhhccHHHHHhhhhhhcC--------------------------------------ccHHHHHHHHHHcCCchh
Confidence 9974 3456799999987532110 001236788999999877
Q ss_pred ccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhh
Q 001507 166 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 245 (1065)
Q Consensus 166 ~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~ 245 (1065)
.++.+ ..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++. +.+|++++|+.+++.++
T Consensus 120 ~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~sH~~~~~~~~ 192 (205)
T cd03226 120 KERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQ--GKAVIVITHDYEFLAKV 192 (205)
T ss_pred cCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHh
Confidence 66654 469999999999999999999999999999999999999999999998643 56677799999999999
Q ss_pred cccEEEecCCcEE
Q 001507 246 FDDVILLSEGQIV 258 (1065)
Q Consensus 246 ~D~v~~l~~G~i~ 258 (1065)
||++++|++|+++
T Consensus 193 ~d~i~~l~~G~iv 205 (205)
T cd03226 193 CDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEEECCEEC
Confidence 9999999999874
No 203
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.8e-37 Score=347.05 Aligned_cols=205 Identities=22% Similarity=0.313 Sum_probs=176.5
Q ss_pred ccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCc----cCCc---cc----ccceEEEE
Q 001507 710 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY----PKRQ---ET----FARISGYC 778 (1065)
Q Consensus 710 ~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~----~~~~---~~----~~~~~~~v 778 (1065)
++...+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|+++|. ++.. .. .++.++||
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 456789999999999999999999999999999999999887 56899999996 2221 11 12579999
Q ss_pred cCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCC
Q 001507 779 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 858 (1065)
Q Consensus 779 ~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p 858 (1065)
+|++.+++.+||+||+.|+...+. ....+..++++++++.++|.+..+... ..||||||||++|||||+.+|
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g---~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQG---MPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999998764432 234455667889999999988777654 479999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 859 SIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 859 ~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+||||||||+|||+.++..+++.|+++.++ |+|||++|||++ ++.+.+|++++|. +|+++..|++.
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~-~G~iv~~g~~~ 250 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIME-GGRIIQHGTPE 250 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEecCHH
Confidence 999999999999999999999999999765 999999999987 5778999999998 58999999863
No 204
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=333.44 Aligned_cols=200 Identities=22% Similarity=0.320 Sum_probs=168.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSPG 787 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~~~~~~ 787 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 17 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 17 KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 4579999999999999999999999999999999999876 5689999999876431 235679999999999998
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHc-CCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
+||.||+.+..... ......+.++++++.+ ++.+..+.. +..||||||||++|||+|+.+|+||+||||
T Consensus 95 ~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~illlDEP 164 (237)
T PRK11614 95 MTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMSGGEQQMLAIGRALMSQPRLLLLDEP 164 (237)
T ss_pred CcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEcCc
Confidence 99999998754221 1122234466777777 465544443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|. +|++++.|++
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 221 (237)
T PRK11614 165 SLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLE-NGHVVLEDTG 221 (237)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEe-CCEEEeeCCH
Confidence 9999999999999999999877999999999986 5788899999998 5899999975
No 205
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=6.6e-38 Score=333.79 Aligned_cols=207 Identities=25% Similarity=0.380 Sum_probs=168.5
Q ss_pred HHhhhhcCCcc-ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-------C
Q 001507 7 RQLRIYRGNRS-KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------P 78 (1065)
Q Consensus 7 ~~~~~~~~~~~-~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-------~ 78 (1065)
+++++.+++.. .+.+|+|+||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .
T Consensus 4 ~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 4 KNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred eeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHH
Confidence 34555543211 156999999999999999999999999999999999998775 999999998875432 2
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++.+||+||+.++....+... ...+..++++++
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~ 126 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLE 126 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHH
Confidence 3569999999998999999999988654321100 001223778899
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||.+..++.+ +.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+
T Consensus 127 ~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~ 200 (218)
T cd03255 127 RVGLGDRLNHYP-----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKE-AGTTIVVVTHD 200 (218)
T ss_pred HcCCchhhhcCh-----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEECC
Confidence 999987666554 469999999999999999999999999999999999999999999998653 35677778999
Q ss_pred chHHHhhcccEEEecCCcE
Q 001507 239 APEAYELFDDVILLSEGQI 257 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i 257 (1065)
.+++. .||++++|++|++
T Consensus 201 ~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 201 PELAE-YADRIIELRDGKI 218 (218)
T ss_pred HHHHh-hhcEEEEeeCCcC
Confidence 99886 9999999999974
No 206
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.9e-37 Score=328.58 Aligned_cols=195 Identities=27% Similarity=0.397 Sum_probs=164.1
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c---cc-ceEEEEcCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T---FA-RISGYCEQNDIHS 785 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~---~~-~~~~~v~q~~~~~ 785 (1065)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 579999999999999999999999999999999999876 5689999999876421 1 22 5699999999888
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
+.+|++||+.+....+. ....+..+++.++++.+++.+..+... ..||||||||++|||+|+.+|++|||||
T Consensus 96 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDE 167 (221)
T TIGR02211 96 PDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SELSGGERQRVAIARALVNQPSLVLADE 167 (221)
T ss_pred CCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 89999999988654321 122333456788999999977666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEE
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELI 920 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~ 920 (1065)
||+|||+.++..+.+.|++++++ |+|||++||+++ .+ ..+|++++|.+ |+++
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i~ 220 (221)
T TIGR02211 168 PTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQLF 220 (221)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEec
Confidence 99999999999999999999754 899999999986 34 55899999984 6764
No 207
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.4e-37 Score=345.86 Aligned_cols=214 Identities=25% Similarity=0.354 Sum_probs=180.4
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC--CCceEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAY 84 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~--~~~~~~y 84 (1065)
+++++.++ +..+|+|+||++++||+++|+|||||||||||++|+|.+.|+ +|+|.++|.++.... .++.++|
T Consensus 6 ~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~ 79 (301)
T TIGR03522 6 SSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEE
Confidence 34444443 356999999999999999999999999999999999998876 999999998875421 2457999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
++|++.+++.+||+||+.|.+...+... .+....++++++.+||.+
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~ 125 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRP 125 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCch
Confidence 9999999999999999988654332100 001223788999999998
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..++.+ +.||||||||++||+||+.+|++++|||||+|||+.++.++++.|+++++ +++|++++|+.+++.+
T Consensus 126 ~~~~~~-----~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiii~sH~l~~~~~ 197 (301)
T TIGR03522 126 EQHKKI-----GQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK---DKTIILSTHIMQEVEA 197 (301)
T ss_pred HhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC---CCEEEEEcCCHHHHHH
Confidence 777665 46999999999999999999999999999999999999999999998842 3678889999999999
Q ss_pred hcccEEEecCCcEEEEcCcchHHH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
+||+|++|++|++++.|+.+++..
T Consensus 198 ~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 198 ICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred hCCEEEEEECCEEEEeCCHHHHHH
Confidence 999999999999999999988754
No 208
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.6e-38 Score=333.82 Aligned_cols=214 Identities=29% Similarity=0.407 Sum_probs=176.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--CCCceEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAY 84 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--~~~~~~~y 84 (1065)
+++++.+++. .+++|+|+||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|
T Consensus 4 ~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 4 RNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred EeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEE
Confidence 3455544321 246999999999999999999999999999999999998775 99999999876432 22456999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
++|++.+++.+||+||+.+.....+... ......++++++.+||.+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~ 125 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTD 125 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHH
Confidence 9999988889999999987644321100 001123678899999987
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..++.+ ..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++ + ++|++++|+.+++..
T Consensus 126 ~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~ 197 (220)
T cd03263 126 KANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEA 197 (220)
T ss_pred HHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHH
Confidence 776655 46999999999999999999999999999999999999999999998863 3 677889999999999
Q ss_pred hcccEEEecCCcEEEEcCcchH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+||++++|++|++++.|+++++
T Consensus 198 ~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 198 LCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999987653
No 209
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=352.93 Aligned_cols=206 Identities=20% Similarity=0.284 Sum_probs=175.7
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC-------CceEEEEcccccc
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 91 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~-------~~~~~yv~Q~~~~ 91 (1065)
..+|+|+||+|++||+++|+|||||||||||++|+|++.|. +|+|.++|.++..... ++.++||+|++.+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 35899999999999999999999999999999999999876 9999999998754321 2469999999999
Q ss_pred CCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccccccccc
Q 001507 92 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 171 (1065)
Q Consensus 92 ~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg 171 (1065)
++++||+||+.|+....+... .+...+++++++.+||.+..++.+
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc-
Confidence 999999999998754322100 001223778899999987766554
Q ss_pred CcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEE
Q 001507 172 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 251 (1065)
Q Consensus 172 ~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~ 251 (1065)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ .++||++++|+.+++..++|+|++
T Consensus 163 ----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~-~g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 163 ----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAK-HQRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-CCCeEEEEECCHHHHHHhCCEEEE
Confidence 569999999999999999999999999999999999999999999998654 356777799999999999999999
Q ss_pred ecCCcEEEEcCcchHH
Q 001507 252 LSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 252 l~~G~i~~~G~~~~~~ 267 (1065)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999987764
No 210
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.6e-38 Score=335.36 Aligned_cols=213 Identities=24% Similarity=0.350 Sum_probs=173.5
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCc-----CCCCceeEEEEECCccCCCCC----
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL-----GHHLQVSGKITYNGHGFKEFV---- 77 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~-----~~~~~~~G~i~~~g~~~~~~~---- 77 (1065)
+++++.+++ +.+|+|+||++++||+++|+||||||||||+++|+|.+ .|. +|+|.++|.++....
T Consensus 4 ~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 4 RDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred EEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHH
Confidence 345555432 36999999999999999999999999999999999998 554 999999998765422
Q ss_pred -CCceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHH
Q 001507 78 -PPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYI 156 (1065)
Q Consensus 78 -~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 156 (1065)
.++.++|++|++.++ .+||+||+.++....+... . ...+.+++++
T Consensus 78 ~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~~~--~-------------------------------~~~~~~~~~~ 123 (227)
T cd03260 78 ELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGIKL--K-------------------------------EELDERVEEA 123 (227)
T ss_pred HHHhhEEEEecCchhc-cccHHHHHHhHHHhcCCCc--H-------------------------------HHHHHHHHHH
Confidence 245799999998877 7999999988643221000 0 0012336788
Q ss_pred HHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEec
Q 001507 157 MKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLL 236 (1065)
Q Consensus 157 l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~ 236 (1065)
++.+||.+..+..+. +.+||||||||++|||||+.+|++++|||||+|||+.++..+++.|+++++ + ++|++++
T Consensus 124 l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~s 197 (227)
T cd03260 124 LRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVT 197 (227)
T ss_pred HHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEe
Confidence 999999876554420 357999999999999999999999999999999999999999999999864 3 6778899
Q ss_pred CCchHHHhhcccEEEecCCcEEEEcCcch
Q 001507 237 QPAPEAYELFDDVILLSEGQIVYQGPRVS 265 (1065)
Q Consensus 237 ~~~~~~~~~~D~v~~l~~G~i~~~G~~~~ 265 (1065)
|+.+++..+||++++|++|++++.|++++
T Consensus 198 H~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 198 HNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred ccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 99999999999999999999999998754
No 211
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.7e-37 Score=333.13 Aligned_cols=209 Identities=21% Similarity=0.282 Sum_probs=168.8
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c-ccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+||+|++||+++|+||||||||||+++|+|.....+.+|+|.++|.++... . .+..++|++|++.+++
T Consensus 11 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (243)
T TIGR01978 11 EDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIP 90 (243)
T ss_pred CCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccC
Confidence 34579999999999999999999999999999999999841115689999999875431 2 2334899999999999
Q ss_pred CCCHHHHHHHHhhccCCC----CCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCce
Q 001507 787 GLTVLESLLFSAWLRLPS----EIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 861 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il 861 (1065)
.+|++|++.+........ .....+..++++++++.+++. ...+.... ..||||||||++|||+|+.+|++|
T Consensus 91 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~ll 166 (243)
T TIGR01978 91 GVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLA 166 (243)
T ss_pred CcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998764322110 012223345678899999996 34444321 249999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHh-cCeEEEEecCcEEEEeCCC
Q 001507 862 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 862 ~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|. +|++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~-~G~i~~~g~~ 229 (243)
T TIGR01978 167 ILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLL-DGRIVKSGDV 229 (243)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEe-CCEEEEecCH
Confidence 999999999999999999999999877899999999986 45566 79999998 5899988875
No 212
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-37 Score=335.72 Aligned_cols=206 Identities=23% Similarity=0.259 Sum_probs=171.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c-ccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . .+..++|++|++.+++
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (255)
T PRK11300 16 GGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFR 93 (255)
T ss_pred CCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEECCCCCHHHHHhcCeEEeccCcccCC
Confidence 34679999999999999999999999999999999999876 5689999999876431 1 2345899999999999
Q ss_pred CCCHHHHHHHHhhccCC----------C--CCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHH
Q 001507 787 GLTVLESLLFSAWLRLP----------S--EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVEL 854 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~----------~--~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l 854 (1065)
.+||+||+.++...... . .....+..+.++++++.+++.+..+... ..||||||||++|||||
T Consensus 94 ~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al 168 (255)
T PRK11300 94 EMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQA-----GNLAYGQQRRLEIARCM 168 (255)
T ss_pred CCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCCh-----hhCCHHHHHHHHHHHHH
Confidence 99999999986431100 0 0011123346778899999877666543 57999999999999999
Q ss_pred HhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 855 VANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 855 ~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 169 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 238 (255)
T PRK11300 169 VTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDRIYVVN-QGTPLANGTP 238 (255)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEecCCH
Confidence 9999999999999999999999999999999765 899999999986 5778899999998 5899998875
No 213
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=343.96 Aligned_cols=230 Identities=24% Similarity=0.320 Sum_probs=182.1
Q ss_pred HHhhhhcCCcc--ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-------C
Q 001507 7 RQLRIYRGNRS--KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------V 77 (1065)
Q Consensus 7 ~~~~~~~~~~~--~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-------~ 77 (1065)
+++++.++... ...+|+|||++|++||+++|+||||||||||+++|+|.+.|+ +|+|.++|.++... .
T Consensus 5 ~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 5 EKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHH
Confidence 45555554221 135999999999999999999999999999999999999876 99999999987421 1
Q ss_pred CCceEEEEcccc--ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHH
Q 001507 78 PPRTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY 155 (1065)
Q Consensus 78 ~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 155 (1065)
.++.++||+|++ .++. .||.||+.|+....+... .+.+.++.+
T Consensus 82 ~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~ 126 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAE 126 (288)
T ss_pred HHhhEEEEecCcchhccc-chHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHH
Confidence 245799999986 4444 699999998754321100 011234788
Q ss_pred HHHHhCCc-ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEE
Q 001507 156 IMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVIS 234 (1065)
Q Consensus 156 ~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~ 234 (1065)
+++.+||. +..++. ++.||||||||++|||||+.+|+|++|||||+|||+.++..+.+.|+++.+ .+.||++
T Consensus 127 ~l~~~~L~~~~~~~~-----~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~ 199 (288)
T PRK13643 127 KLEMVGLADEFWEKS-----PFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ--SGQTVVL 199 (288)
T ss_pred HHHHcCCChhhccCC-----cccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEE
Confidence 89999996 344443 457999999999999999999999999999999999999999999998864 2567888
Q ss_pred ecCCchHHHhhcccEEEecCCcEEEEcCcchHHH---HHHhCCCCCCCCC
Q 001507 235 LLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLD---FFASMGFSCPKRK 281 (1065)
Q Consensus 235 ~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~---~f~~lG~~~p~~~ 281 (1065)
++|+.+++..+||+|++|++|++++.|+++++.+ .+...|+.+|...
T Consensus 200 vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~ 249 (288)
T PRK13643 200 VTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQEVDFLKAHELGVPKAT 249 (288)
T ss_pred EecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcCHHHHHHcCCCCChHH
Confidence 9999999999999999999999999999988742 3445566655543
No 214
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=333.97 Aligned_cols=214 Identities=20% Similarity=0.285 Sum_probs=173.6
Q ss_pred HHHhhhhcCCcc-ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC------
Q 001507 6 LRQLRIYRGNRS-KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------ 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~-~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~------ 78 (1065)
++++++.++... .+.+|+|+||+|++||+++|+||||||||||+++|+|.+.|+ +|+|.++|+++.....
T Consensus 8 ~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 8 CDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred EEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHH
Confidence 345555554322 256999999999999999999999999999999999998765 9999999988754321
Q ss_pred -CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHH
Q 001507 79 -PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIM 157 (1065)
Q Consensus 79 -~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l 157 (1065)
++.++|++|++.+++.+||+||+.+.....+.. . .+.+.++++++
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~---~-------------------------------~~~~~~~~~~l 130 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKK---P-------------------------------AEINSRALEML 130 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCC---H-------------------------------HHHHHHHHHHH
Confidence 246999999998899999999998864321100 0 00122477889
Q ss_pred HHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecC
Q 001507 158 KILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQ 237 (1065)
Q Consensus 158 ~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~ 237 (1065)
+.+||++..++.+ .+||||||||++||||++.+|+|++|||||+|||+.++..+.+.|+++++. ++++|++++|
T Consensus 131 ~~~gl~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH 204 (233)
T PRK11629 131 AAVGLEHRANHRP-----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTH 204 (233)
T ss_pred HHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeC
Confidence 9999987666544 469999999999999999999999999999999999999999999988643 3567777999
Q ss_pred CchHHHhhcccEEEecCCcEEEEcCc
Q 001507 238 PAPEAYELFDDVILLSEGQIVYQGPR 263 (1065)
Q Consensus 238 ~~~~~~~~~D~v~~l~~G~i~~~G~~ 263 (1065)
+.+++.. +|++++|++|++++.|+.
T Consensus 205 ~~~~~~~-~~~~~~l~~G~i~~~~~~ 229 (233)
T PRK11629 205 DLQLAKR-MSRQLEMRDGRLTAELSL 229 (233)
T ss_pred CHHHHHh-hCEEEEEECCEEEEEecc
Confidence 9998876 479999999999998864
No 215
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.5e-37 Score=332.07 Aligned_cols=205 Identities=24% Similarity=0.331 Sum_probs=171.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++
T Consensus 13 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (242)
T TIGR03411 13 DGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFE 90 (242)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCC
Confidence 34579999999999999999999999999999999999876 5689999999876421 12346999999999999
Q ss_pred CCCHHHHHHHHhhccCC-----CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCce
Q 001507 787 GLTVLESLLFSAWLRLP-----SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 861 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~-----~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il 861 (1065)
.+||+||+.+....... .....+...++++++++.+++.+..+..+ +.||||||||++|||||+.+|++|
T Consensus 91 ~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrv~laral~~~p~~l 165 (242)
T TIGR03411 91 NLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----GLLSHGQKQWLEIGMLLMQDPKLL 165 (242)
T ss_pred CCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999885431100 00112234456889999999987666543 579999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 862 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 862 ~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|. +|+++..|+.
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~-~g~~~~~~~~ 226 (242)
T TIGR03411 166 LLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLH-QGSVLAEGSL 226 (242)
T ss_pred EecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEE-CCeEEeeCCH
Confidence 99999999999999999999999865 799999999986 5777899999998 4789988874
No 216
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-37 Score=336.86 Aligned_cols=223 Identities=26% Similarity=0.367 Sum_probs=177.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPR 80 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~ 80 (1065)
+++++.+++ ...+|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++
T Consensus 4 ~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 4 ENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred eeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHh
Confidence 345555433 146999999999999999999999999999999999998765 999999998775432 235
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+||+||+.++..... ..... ..+. ........++++++.+
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~---------~~~~---------------~~~~~~~~~~~~l~~~ 132 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRR--STWRS---------LFGL---------------FPKEEKQRALAALERV 132 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccc--hhhhh---------hccc---------------CcHHHHHHHHHHHHHc
Confidence 69999999988898999999987532110 00000 0000 0001123477889999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..++.+ ..|||||||||+|||||+.+|+|++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+
T Consensus 133 ~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~~~ 206 (241)
T cd03256 133 GLLDKAYQRA-----DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINRE-EGITVIVSLHQVD 206 (241)
T ss_pred CChhhhCCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHH
Confidence 9987665544 569999999999999999999999999999999999999999999998753 3567777999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
++..+||++++|++|++++.|+++++
T Consensus 207 ~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (241)
T cd03256 207 LAREYADRIVGLKDGRIVFDGPPAEL 232 (241)
T ss_pred HHHHhCCEEEEEECCEEEeecCHHHh
Confidence 99999999999999999999988765
No 217
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-37 Score=332.65 Aligned_cols=202 Identities=26% Similarity=0.355 Sum_probs=170.9
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC---------cccccceEEEEcCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---------QETFARISGYCEQND 782 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~---------~~~~~~~~~~v~q~~ 782 (1065)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++. ....++.++|++|++
T Consensus 14 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 14 AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 4579999999999999999999999999999999999876 56899999998652 112356799999999
Q ss_pred CCCCCCCHHHHHHHH-hhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCce
Q 001507 783 IHSPGLTVLESLLFS-AWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 861 (1065)
Q Consensus 783 ~~~~~ltv~e~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il 861 (1065)
.+++.+|+.||+.+. .... .....+..+.+.++++.+|+.+..+... ..||||||||++|||||+.+|++|
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~ll 163 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP-----LHLSGGQQQRVAIARALMMEPQVL 163 (242)
T ss_pred cccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999753 2221 1122333456788999999987666543 579999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 862 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 862 ~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|. +|++++.|+.
T Consensus 164 ilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 225 (242)
T PRK11124 164 LFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYME-NGHIVEQGDA 225 (242)
T ss_pred EEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999999777999999999986 5667899999998 5899998875
No 218
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=5.1e-37 Score=334.10 Aligned_cols=203 Identities=25% Similarity=0.316 Sum_probs=172.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----------------ccccceE
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----------------ETFARIS 775 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~~ 775 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 12 ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 4579999999999999999999999999999999999876 568999999987532 1245679
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHH
Q 001507 776 GYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV 855 (1065)
Q Consensus 776 ~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~ 855 (1065)
+|++|++.+++..|+.||+.+..... .........+.++++++.+++.+..+... ..||||||||++|||+|+
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~ 162 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHMP-----AQLSGGQQQRVAIARALA 162 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcCh-----hhcCHHHHHHHHHHHHHH
Confidence 99999999999999999998753211 11223344456788999999977666543 579999999999999999
Q ss_pred hCCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 856 ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 856 ~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|. +|++++.|+.
T Consensus 163 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 231 (252)
T TIGR03005 163 MRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFD-KGRIVEQGKP 231 (252)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999999999998765 899999999986 5667899999998 5899988874
No 219
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-37 Score=326.38 Aligned_cols=194 Identities=27% Similarity=0.371 Sum_probs=164.0
Q ss_pred eeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCCHHHHHHH
Q 001507 718 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLESLLF 796 (1065)
Q Consensus 718 ~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~l~~ 796 (1065)
|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 568999999987643 1234679999999999999999999987
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHH
Q 001507 797 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 876 (1065)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~ 876 (1065)
....+.. . .....++++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~~--~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGLK--L-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred ccccccC--c-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 5422111 1 1233456789999999987766543 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 877 IVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 877 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
.+++.|++++++ |+|||++||+++ ++.+.+|++++|. +|+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLD-NGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEE-CCEEeecC
Confidence 999999999754 899999999986 5667899999998 57887653
No 220
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.1e-38 Score=377.97 Aligned_cols=220 Identities=28% Similarity=0.398 Sum_probs=178.4
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++...+ .+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||.++.+.. .++.+
T Consensus 474 ~~nvsf~y~~~~~-~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~i 549 (709)
T COG2274 474 FENVSFRYGPDDP-PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQV 549 (709)
T ss_pred EEEEEEEeCCCCc-chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhhe
Confidence 5677777766543 7999999999999999999999999999999999999886 999999999987664 46899
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+||+|++.+|. .||+|||.++... ...+.+.++|.... +.+ ....+
T Consensus 550 g~V~Q~~~Lf~-gSI~eNi~l~~p~----~~~e~i~~A~~~ag---------------------------~~~--fI~~l 595 (709)
T COG2274 550 GYVLQDPFLFS-GSIRENIALGNPE----ATDEEIIEAAQLAG---------------------------AHE--FIENL 595 (709)
T ss_pred eEEcccchhhc-CcHHHHHhcCCCC----CCHHHHHHHHHHhC---------------------------cHH--HHHhc
Confidence 99999999776 5999999885321 11122222221110 111 12358
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
+..+||.||+.+. +||||||||++||||++++|+||+||||||+||+.+...+.+.|.++.+ + .|+|+++|..+ .
T Consensus 596 P~gy~t~v~E~G~-~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~-~T~I~IaHRl~-t 670 (709)
T COG2274 596 PMGYDTPVGEGGA-NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--G-RTVIIIAHRLS-T 670 (709)
T ss_pred ccccccccccCCC-CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--C-CeEEEEEccch-H
Confidence 8899999998654 8999999999999999999999999999999999999999999998753 3 44555666654 5
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
.+.||+|+||++|+++++|+++++++
T Consensus 671 i~~adrIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 671 IRSADRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred hhhccEEEEccCCceeccCCHHHHHH
Confidence 57899999999999999999999976
No 221
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-37 Score=336.46 Aligned_cols=200 Identities=24% Similarity=0.326 Sum_probs=170.7
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCCC-CCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDI-HSPG 787 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~~-~~~~ 787 (1065)
+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++. .+..
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 469999999999999999999999999999999999876 568999999987642 234567999999975 3567
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
.|+.||+.|..... ........+.++++++.+++.+..+..+ ..||||||||++|||||+.+|+||||||||
T Consensus 93 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt 164 (274)
T PRK13644 93 RTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSGGQGQCVALAGILTMEPECLIFDEVT 164 (274)
T ss_pred chHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998865332 1233444566888999999987766644 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||+.++..+++.|++++++|.|||++||+++ ++ ..+|++++|. +|++++.|+.
T Consensus 165 ~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~-~G~i~~~g~~ 219 (274)
T PRK13644 165 SMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMD-RGKIVLEGEP 219 (274)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEE-CCEEEEECCH
Confidence 999999999999999999877999999999986 45 5699999998 4799999875
No 222
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=332.32 Aligned_cols=218 Identities=26% Similarity=0.316 Sum_probs=174.2
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~---~~~~G~i~i~g 763 (1065)
.+.++|+++.+ +++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWY-------------GEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEe-------------CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 46666665543 345799999999999999999999999999999999998652 13689999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCC
Q 001507 764 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 838 (1065)
Q Consensus 764 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 838 (1065)
.++.. ..+++.+||++|++.+++ +|++||+.|....+. .......+.++++++.+++.+....... ....
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 153 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIHG---ANKKDLDGVVENALRSAALWDETSDRLK-SPAL 153 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcchhhhhc-CChh
Confidence 87532 134567999999988887 899999998754321 2233344567889999888432111111 1235
Q ss_pred CCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 839 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 839 ~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++++ |+|||++||+++ ++.+.+|++++|. +|+
T Consensus 154 ~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~ 230 (258)
T PRK14268 154 SLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL-MGE 230 (258)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999864 899999999986 5667899999998 589
Q ss_pred EEEeCCC
Q 001507 919 LIYAGPL 925 (1065)
Q Consensus 919 ~~~~g~~ 925 (1065)
+++.|++
T Consensus 231 i~~~~~~ 237 (258)
T PRK14268 231 LIEFGQT 237 (258)
T ss_pred EEEeCCH
Confidence 9998875
No 223
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-37 Score=334.72 Aligned_cols=203 Identities=27% Similarity=0.394 Sum_probs=171.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 787 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ 787 (1065)
+++.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.
T Consensus 13 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (258)
T PRK13548 13 GGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFP 90 (258)
T ss_pred CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcccCCHHHhhhheEEEccCCcCCCC
Confidence 34579999999999999999999999999999999999876 568999999987532 2344679999999888888
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHH------hCCCce
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV------ANPSIV 861 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~------~~p~il 861 (1065)
+||+||+.+...... ...+...+.++++++.+++.+..+..+ ..|||||||||+|||||+ .+|++|
T Consensus 91 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe~qrv~la~al~~~~~~~~~p~ll 162 (258)
T PRK13548 91 FTVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGEQQRVQLARVLAQLWEPDGPPRWL 162 (258)
T ss_pred CCHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhcccccCCCCCEE
Confidence 999999987543211 112233456788999999987666644 579999999999999999 599999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 862 FMDEPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 862 ~lDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||||+|||+.++..+.+.|++++ ++|+|||++||+++ .+...+|++++|. +|++++.|+.
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 225 (258)
T PRK13548 163 LLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLH-QGRLVADGTP 225 (258)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEE-CCEEEeeCCH
Confidence 9999999999999999999999997 56899999999986 5677899999998 5799988875
No 224
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.4e-37 Score=332.75 Aligned_cols=212 Identities=21% Similarity=0.347 Sum_probs=175.5
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCceEE
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSA 83 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~~~ 83 (1065)
++++.++ .+.+|+|+||++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++
T Consensus 5 ~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 5 NLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred EEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEE
Confidence 4444443 246999999999999999999999999999999999998775 999999998765432 124699
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD 163 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~ 163 (1065)
|++|++.+++.+||+||+.+.....+... ......++++++.+||.
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~ 124 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSK----------------------------------KEREEKLEELLEEFHIT 124 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCh
Confidence 99999998999999999987543211000 00112367889999998
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHH
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 243 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~ 243 (1065)
+..++.+ +.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++ .+++|++++|+.+++.
T Consensus 125 ~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~ 197 (232)
T cd03218 125 HLRKSKA-----SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD--RGIGVLITDHNVRETL 197 (232)
T ss_pred hhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHH
Confidence 7666554 46999999999999999999999999999999999999999999998865 2567777999999999
Q ss_pred hhcccEEEecCCcEEEEcCcchH
Q 001507 244 ELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 244 ~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+++|++++|++|++++.|+.+++
T Consensus 198 ~~~d~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 198 SITDRAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred HhCCEEEEEECCeEEEEeCHHHh
Confidence 99999999999999999987665
No 225
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-37 Score=336.34 Aligned_cols=215 Identities=27% Similarity=0.365 Sum_probs=176.0
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEEE
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAY 84 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~y 84 (1065)
++++.+++. ..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|
T Consensus 5 ~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 5 NVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred EEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEE
Confidence 444444321 46999999999999999999999999999999999998775 999999998765422 2457899
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
++|++.+++.+||+||+.++....+... ......++++++.+||.+
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~ 125 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDP 125 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCc
Confidence 9999998999999999987643221000 001223678899999985
Q ss_pred --cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 165 --CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 165 --~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
..++. +++|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++
T Consensus 126 ~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~ 199 (242)
T cd03295 126 AEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEA 199 (242)
T ss_pred HHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHH
Confidence 44443 4579999999999999999999999999999999999999999999998653 356777799999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
..++|+|++|++|++++.|+++++.
T Consensus 200 ~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 200 FRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999876653
No 226
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=328.39 Aligned_cols=227 Identities=21% Similarity=0.302 Sum_probs=187.5
Q ss_pred HHHhhhhcCCc-cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcC-C-CCceeEEEEECCccCCCCC-----
Q 001507 6 LRQLRIYRGNR-SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG-H-HLQVSGKITYNGHGFKEFV----- 77 (1065)
Q Consensus 6 ~~~~~~~~~~~-~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~-~-~~~~~G~i~~~g~~~~~~~----- 77 (1065)
++++++++... ....+++||||++++||+++|+|.|||||||+.++|+|+++ + ....+|+|.|+|.++-...
T Consensus 4 v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~ 83 (316)
T COG0444 4 VKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELR 83 (316)
T ss_pred EeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHH
Confidence 45677776553 35789999999999999999999999999999999999997 3 3357899999999764432
Q ss_pred --CCceEEEEcccc--ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHH
Q 001507 78 --PPRTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVV 153 (1065)
Q Consensus 78 --~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 153 (1065)
..+.|+|++|++ .+-|..||.+.+.-..+.+.... ...+..+++
T Consensus 84 ~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a 131 (316)
T COG0444 84 KIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERA 131 (316)
T ss_pred hhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHH
Confidence 235799999997 57888999998876544321100 011223458
Q ss_pred HHHHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEE
Q 001507 154 EYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVI 233 (1065)
Q Consensus 154 ~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii 233 (1065)
.++|+.+||++... +-+.+..+|||||||||.||.||+.+|++||.||||++||..++.+|++.|+++.++ .+++++
T Consensus 132 ~~~L~~Vgi~~~~~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e-~~~aii 208 (316)
T COG0444 132 IELLELVGIPDPER--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQRE-KGTALI 208 (316)
T ss_pred HHHHHHcCCCCHHH--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHh-cCCEEE
Confidence 88999999987422 335678899999999999999999999999999999999999999999999999874 578888
Q ss_pred EecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 234 SLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 234 ~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.||||...+.++||||+||..|++++.|+.+++.
T Consensus 209 lITHDl~vva~~aDri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 209 LITHDLGVVAEIADRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred EEeCCHHHHHHhcceEEEEECcEEEEeCCHHHHh
Confidence 8999999999999999999999999999998874
No 227
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.2e-37 Score=346.26 Aligned_cols=208 Identities=20% Similarity=0.231 Sum_probs=174.3
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCceEEEEcccc--c
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 90 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~~~~yv~Q~~--~ 90 (1065)
..+++||||+|++||+++|+|+||||||||+++|+|++.+. +|+|.++|.++.+.. .++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 57999999999999999999999999999999999999775 999999999875432 245799999997 5
Q ss_pred cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc-cccccc
Q 001507 91 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 169 (1065)
Q Consensus 91 ~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~ 169 (1065)
+++.+||.||+.+......... . ..+....++++++.+||. +..++
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~--~------------------------------~~~~~~~~~~~l~~vgl~~~~~~~- 157 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKL--S------------------------------RQEVKDRVKAMMLKVGLLPNLINR- 157 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCC--C------------------------------HHHHHHHHHHHHHHcCCChHHhcC-
Confidence 7889999999988643221000 0 001123477889999994 34444
Q ss_pred ccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccE
Q 001507 170 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 249 (1065)
Q Consensus 170 vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v 249 (1065)
.+..|||||||||+|||||+.+|++|++||||+|||..++.++++.|+++.++ .+.++++++|+...+..++|+|
T Consensus 158 ----~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 158 ----YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 45679999999999999999999999999999999999999999999998754 3567888999999999999999
Q ss_pred EEecCCcEEEEcCcchHH
Q 001507 250 ILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 250 ~~l~~G~i~~~G~~~~~~ 267 (1065)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999988774
No 228
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-37 Score=332.62 Aligned_cols=209 Identities=24% Similarity=0.287 Sum_probs=170.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCCc---ccccceEEEEcCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ---ETFARISGYCEQNDIHS 785 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~ 785 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 15 ~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~ 94 (250)
T PRK14247 15 QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPI 94 (250)
T ss_pred CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccC
Confidence 457999999999999999999999999999999999986531 368999999987642 23456799999999888
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
+.+||.||+.+....+.. .....+..+.++++++.+++.+...... ...+..||||||||++|||||+.+|++|+|||
T Consensus 95 ~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgG~~qrv~laral~~~p~lllLDE 172 (250)
T PRK14247 95 PNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRL-DAPAGKLSGGQQQRLCIARALAFQPEVLLADE 172 (250)
T ss_pred CCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 899999999886533211 1122334456788999999854211111 11235899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|+ +|+++..|+.
T Consensus 173 P~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 229 (250)
T PRK14247 173 PTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLY-KGQIVEWGPT 229 (250)
T ss_pred CCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEE-CCeEEEECCH
Confidence 9999999999999999999864 899999999986 5667899999998 5899988875
No 229
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-37 Score=336.38 Aligned_cols=200 Identities=28% Similarity=0.340 Sum_probs=171.3
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC-CCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 788 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 788 (1065)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|+++.. ...++.+||++|++. +++..
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 469999999999999999999999999999999999877 568999999987643 234567999999973 66778
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||.||+.+..... ....++..++++++++.++|.+..+..+ ..||||||||++|||+|+.+|+||||||||+
T Consensus 98 tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt~ 169 (279)
T PRK13635 98 TVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGGQKQRVAIAGVLALQPDIIILDEATS 169 (279)
T ss_pred cHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998865432 1233444567889999999987776654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+.++..+++.|++++++ |+|||++||+++ .+ ..+|++++|. +|++++.|+.
T Consensus 170 gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~-~G~i~~~g~~ 224 (279)
T PRK13635 170 MLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMN-KGEILEEGTP 224 (279)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999865 899999999986 34 4699999998 5899999875
No 230
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.3e-37 Score=348.80 Aligned_cols=207 Identities=22% Similarity=0.275 Sum_probs=175.5
Q ss_pred ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCc----cCCCCC-------CCceEEEEc
Q 001507 18 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGH----GFKEFV-------PPRTSAYVS 86 (1065)
Q Consensus 18 ~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~----~~~~~~-------~~~~~~yv~ 86 (1065)
...+|+|+||+|++||+++|+|+||||||||+++|+|++.|. +|+|.++|. ++.... .++.++||+
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 467899999999999999999999999999999999999875 999999996 332221 124699999
Q ss_pred cccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccc
Q 001507 87 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 166 (1065)
Q Consensus 87 Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 166 (1065)
|++.+++.+||+||+.|+....+... .+.+..++++++.+||.+..
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~~ 158 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQWA 158 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhh
Confidence 99999999999999998754322100 00123478889999998877
Q ss_pred cccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhc
Q 001507 167 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 246 (1065)
Q Consensus 167 ~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~ 246 (1065)
|..+ ..|||||||||+|||||+.+|+||||||||+|||+.++.++.+.|.++.++. ++||++++|+.+++.+++
T Consensus 159 ~~~~-----~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~l~ 232 (382)
T TIGR03415 159 DKKP-----GELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALKIG 232 (382)
T ss_pred cCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhC
Confidence 6654 4699999999999999999999999999999999999999999999987543 567777999999999999
Q ss_pred ccEEEecCCcEEEEcCcchHH
Q 001507 247 DDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 247 D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
|+|++|++|+++..|+++++.
T Consensus 233 DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 233 NRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CEEEEEECCEEEEecCHHHHh
Confidence 999999999999999988774
No 231
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1e-37 Score=332.34 Aligned_cols=211 Identities=27% Similarity=0.393 Sum_probs=172.8
Q ss_pred HHhhhhcCCcc-ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--CCCceEE
Q 001507 7 RQLRIYRGNRS-KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~-~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--~~~~~~~ 83 (1065)
+++++.+++.. ..++|+|+|+++++|++++|+|+||||||||+++|+|.++|. +|+|.++|.++... ..++.++
T Consensus 5 ~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 5 DALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred EEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEE
Confidence 44555554321 126999999999999999999999999999999999998775 99999999877532 2245799
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD 163 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~ 163 (1065)
|++|++.+++.+||+||+.+.....+.. . .+....++++++.+||.
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~ 127 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLK--G--------------------------------DELTARLEELADRLGME 127 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCH
Confidence 9999998889899999998754322100 0 00122477899999998
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHH
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 243 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~ 243 (1065)
+..+..+ ..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+ .+.+|++++|+.+++.
T Consensus 128 ~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~ 200 (218)
T cd03266 128 ELLDRRV-----GGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA--LGKCILFSTHIMQEVE 200 (218)
T ss_pred HHHhhhh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHH
Confidence 7766554 46999999999999999999999999999999999999999999999864 2567777999999999
Q ss_pred hhcccEEEecCCcEEEEc
Q 001507 244 ELFDDVILLSEGQIVYQG 261 (1065)
Q Consensus 244 ~~~D~v~~l~~G~i~~~G 261 (1065)
.++|++++|++|++++.|
T Consensus 201 ~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 201 RLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCEEEEEECCEEeecC
Confidence 999999999999998754
No 232
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-38 Score=348.15 Aligned_cols=218 Identities=25% Similarity=0.387 Sum_probs=178.3
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
+.+++++++. ++++|+++||+|++||-+||+|+|||||||++|+|.+.+. + +|+|.+||.++.+.. .++.|
T Consensus 354 F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~I 427 (591)
T KOG0057|consen 354 FDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSI 427 (591)
T ss_pred EEeeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhhe
Confidence 3566676653 3569999999999999999999999999999999999886 3 999999999886653 46789
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|||||+..+|.+ ||.+||.++.. ...++.+.+.|+... ..++ ...|
T Consensus 428 g~VPQd~~LFnd-TIl~NI~YGn~----sas~eeV~e~~k~a~---------------------------~hd~--i~~l 473 (591)
T KOG0057|consen 428 GVVPQDSVLFND-TILYNIKYGNP----SASDEEVVEACKRAG---------------------------LHDV--ISRL 473 (591)
T ss_pred eEeCCcccccch-hHHHHhhcCCC----CcCHHHHHHHHHHcC---------------------------cHHH--HHhc
Confidence 999999997765 99999998632 223344444443311 1111 2347
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++.++|.||+++. .|||||||||+||||++.+|+|+++|||||+||+++..++++.+.+. .+++|+|.+.|+.+.+
T Consensus 474 ~~GY~T~VGerG~-~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~---~~~rTvI~IvH~l~ll 549 (591)
T KOG0057|consen 474 PDGYQTLVGERGL-MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV---MSGRTVIMIVHRLDLL 549 (591)
T ss_pred cccchhhHhhccc-ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh---cCCCeEEEEEecchhH
Confidence 8889999999876 59999999999999999999999999999999999999999999884 2456666688887755
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
.-||+|++|++|++.+.|++++++.
T Consensus 550 -~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 550 -KDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred -hcCCEEEEEECCeeEEeccHHHHhh
Confidence 5689999999999999999999975
No 233
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.7e-38 Score=355.18 Aligned_cols=219 Identities=27% Similarity=0.420 Sum_probs=181.5
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++ ++.+|+|+||++++||+++|+||||||||||||+|+|.++|. +|+|.++|.++.... .++.+
T Consensus 6 ~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 6 VSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred EeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcce
Confidence 456666554 357999999999999999999999999999999999999875 999999998876532 34679
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+||+|++.+++.+||+||+.++..... ..+.. . ......+++++++.+||
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~--~~~~~-------------~---------------~~~~~~~v~~~le~vgl 129 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHR--SRFDT-------------W---------------TETDRAAVERAMERTGV 129 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhc--ccccC-------------C---------------CHHHHHHHHHHHHHcCC
Confidence 999999988889999999988532110 00000 0 00112347889999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
.+..++.+ +.|||||||||+|||||+++|++|+|||||+|||+.++..+++.|+++++ . +++|++++|+.+++
T Consensus 130 ~~~~~~~~-----~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~ 202 (402)
T PRK09536 130 AQFADRPV-----TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLA 202 (402)
T ss_pred chhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHH
Confidence 88777654 46999999999999999999999999999999999999999999999975 2 56777799999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.++||++++|++|++++.|+++++.
T Consensus 203 ~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 203 ARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999988764
No 234
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-37 Score=336.43 Aligned_cols=205 Identities=29% Similarity=0.413 Sum_probs=170.9
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~l 788 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+
T Consensus 23 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 23 GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 4579999999999999999999999999999999999876 568999999987532 23456799999998888889
Q ss_pred CHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 789 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
|+.||+.+....... .........++++++++.+++.+..+..+ ..||||||||++|||||+.+|+||||||||
T Consensus 101 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~lllLDEPt 175 (265)
T PRK10575 101 TVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSGGERQRAWIAMLVAQDSRCLLLDEPT 175 (265)
T ss_pred cHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999875321100 00111223456788999999977666544 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|. +|+++..|+.
T Consensus 176 ~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~-~G~i~~~~~~ 232 (265)
T PRK10575 176 SALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALR-GGEMIAQGTP 232 (265)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEecCH
Confidence 999999999999999999765 899999999986 5778899999998 5899988875
No 235
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-37 Score=327.03 Aligned_cols=198 Identities=25% Similarity=0.377 Sum_probs=167.8
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEccccccCCCCCHH
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 98 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~ 98 (1065)
+.+++|+||++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 46999999999999999999999999999999999998775 9999999987643 2345799999999888889999
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccccC
Q 001507 99 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 178 (1065)
Q Consensus 99 e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~L 178 (1065)
||+.+.....+... ......++++++.+||++..++.+ .+|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EEL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhC
Confidence 99987543321100 001223778899999987666544 469
Q ss_pred chhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEE
Q 001507 179 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 258 (1065)
Q Consensus 179 SGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~ 258 (1065)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+. +.+|++++|+.+++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARA--GKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999988643 567788999999999999999999999998
Q ss_pred EEc
Q 001507 259 YQG 261 (1065)
Q Consensus 259 ~~G 261 (1065)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 236
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-37 Score=332.80 Aligned_cols=209 Identities=25% Similarity=0.262 Sum_probs=169.4
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCC-----cccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-----QETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~-----~~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++. ...+++.++|++|++.
T Consensus 16 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (253)
T PRK14267 16 SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPN 95 (253)
T ss_pred CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCc
Confidence 457999999999999999999999999999999999987632 35899999998764 1234567999999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++.+|+.||+.+....+.. ....+...+.++++++.+++........ ...+..||||||||++|||||+.+|++|+|
T Consensus 96 ~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llll 173 (253)
T PRK14267 96 PFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRL-NDYPSNLSGGQRQRLVIARALAMKPKILLM 173 (253)
T ss_pred cCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhh-ccChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999886543211 0122333456788899988753211111 112357999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++++ ++|||++||+++ .+...+|++++|. +|++++.|+.
T Consensus 174 DEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 232 (253)
T PRK14267 174 DEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY-LGKLIEVGPT 232 (253)
T ss_pred cCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999865 699999999986 5677899999998 5899998875
No 237
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.7e-37 Score=336.55 Aligned_cols=223 Identities=24% Similarity=0.327 Sum_probs=176.8
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPR 80 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~ 80 (1065)
+++++.++. +..+|+|+||++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++
T Consensus 5 ~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 5 ENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred EeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHh
Confidence 455555531 246999999999999999999999999999999999998775 999999998765421 245
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+||+||+.++..... ..+... .+. .......+++++++.+
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~---------~~~---------------~~~~~~~~~~~~l~~~ 133 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYK--PTWRSL---------LGR---------------FSEEDKERALSALERV 133 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccc--cchhhh---------hcc---------------ccHHHHHHHHHHHHHc
Confidence 69999999988999999999987432100 000000 000 0001123477889999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..+..+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+
T Consensus 134 ~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~ 207 (243)
T TIGR02315 134 GLADKAYQRA-----DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVD 207 (243)
T ss_pred CcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHH
Confidence 9987666544 469999999999999999999999999999999999999999999998653 3567777999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
++.++||++++|++|++++.|+++++
T Consensus 208 ~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 208 LAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999987664
No 238
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-37 Score=321.62 Aligned_cols=202 Identities=24% Similarity=0.314 Sum_probs=183.0
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHS 785 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~~~ 785 (1065)
..-++|+|++|+.||++.|||-||||||||+++|.++.. ++.|+|+++|.++.. ..+++.+++|+|...++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 346789999999999999999999999999999999987 679999999987632 12456799999999999
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
|+.||.||+.|+..++ ..+.+++++++.++++..||.+..+..+ .+||||+||||.|||||+.+|+||++||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999998776 3567888899999999999999998765 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|+|.|||--+..+++.|.+|.++ ++|||++|||++ |.+++-|||.+|+ +|+++..|++.
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~ 250 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPE 250 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHH
Confidence 99999999999999999999755 899999999998 7889999999997 68999999874
No 239
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=334.43 Aligned_cols=201 Identities=25% Similarity=0.352 Sum_probs=171.0
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC-CCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 788 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 788 (1065)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+|||+|++. .+...
T Consensus 17 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 17 KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 459999999999999999999999999999999999877 568999999987643 234567899999974 33467
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||.||+.+..... ....+...++++++++.+++.+..++.+ ..||||||||++|||||+.+|++|||||||+
T Consensus 95 tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrl~laraL~~~p~llilDEPt~ 166 (277)
T PRK13652 95 TVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTA 166 (277)
T ss_pred cHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998765322 2233444556789999999987766654 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 167 gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~-~G~i~~~g~~ 222 (277)
T PRK13652 167 GLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMD-KGRIVAYGTV 222 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEE-CCeEEEECCH
Confidence 99999999999999999765 899999999986 5778899999998 4799999875
No 240
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-37 Score=334.35 Aligned_cols=207 Identities=26% Similarity=0.387 Sum_probs=172.2
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 787 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ 787 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|+..+++.
T Consensus 13 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (255)
T PRK11231 13 GTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEG 90 (255)
T ss_pred CCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhHHCCHHHHhhheEEecccCCCCCC
Confidence 34679999999999999999999999999999999999876 568999999986532 2345679999999888888
Q ss_pred CCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 788 LTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
+|+.||+.++...... .........+.++++++.+++.+..+... ..||||||||++|||||+.+|++|+||||
T Consensus 91 ~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 165 (255)
T PRK11231 91 ITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGGQRQRAFLAMVLAQDTPVVLLDEP 165 (255)
T ss_pred ccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999875211000 01111233456788999999977666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|+ +|+++..|+..
T Consensus 166 ~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~~ 223 (255)
T PRK11231 166 TTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLA-NGHVMAQGTPE 223 (255)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEE-CCeEEEEcCHH
Confidence 9999999999999999998777999999999986 5778899999998 47899888753
No 241
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=344.93 Aligned_cols=218 Identities=23% Similarity=0.343 Sum_probs=175.6
Q ss_pred HHHhhhhcCCcc--ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCC--------
Q 001507 6 LRQLRIYRGNRS--KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE-------- 75 (1065)
Q Consensus 6 ~~~~~~~~~~~~--~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~-------- 75 (1065)
++++++.++... ...+|+|+||+|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+...
T Consensus 5 ~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 5 VKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceeccccccccccc
Confidence 345666554321 236999999999999999999999999999999999999876 8999999865421
Q ss_pred -------------------CCCCceEEEEcccc-ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchh
Q 001507 76 -------------------FVPPRTSAYVSQQD-WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDL 135 (1065)
Q Consensus 76 -------------------~~~~~~~~yv~Q~~-~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (1065)
...++.++||+|++ ..+...||+|||.|+....+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~------------------------ 137 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS------------------------ 137 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC------------------------
Confidence 01245699999985 3445679999999865432110
Q ss_pred HHHHhhhhccCCcchhHHHHHHHHhCCc-ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHH
Q 001507 136 DIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTY 214 (1065)
Q Consensus 136 ~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~ 214 (1065)
..+...+++++++.+||. +..++. +..|||||||||+||+||+.+|++|+|||||+|||+.++.
T Consensus 138 ----------~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~ 202 (305)
T PRK13651 138 ----------KEEAKKRAAKYIELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVK 202 (305)
T ss_pred ----------HHHHHHHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHH
Confidence 001123478889999996 555544 4569999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 215 QIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 215 ~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++.|+++.+ .+.+|++++|+.+++.++||+|++|++|++++.|+++++.
T Consensus 203 ~l~~~l~~l~~--~g~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 203 EILEIFDNLNK--QGKTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred HHHHHHHHHHH--CCCEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 99999999864 3567788999999999999999999999999999988764
No 242
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=345.79 Aligned_cols=217 Identities=22% Similarity=0.375 Sum_probs=175.4
Q ss_pred HHHhhhhcCCc--cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-------
Q 001507 6 LRQLRIYRGNR--SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF------- 76 (1065)
Q Consensus 6 ~~~~~~~~~~~--~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~------- 76 (1065)
++++++.++.. ....+|+|||++|++||+++|+|+||||||||+++|+|++.|. +|+|.++|.++.+.
T Consensus 24 ~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 24 VKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred EEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEccccccccccc
Confidence 35566655432 1246999999999999999999999999999999999999875 99999999876432
Q ss_pred ------------CCCceEEEEcccc--ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhh
Q 001507 77 ------------VPPRTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSF 142 (1065)
Q Consensus 77 ------------~~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (1065)
..++.++||+|++ .+++ .||+||+.|+....+.. .
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~-~----------------------------- 149 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK-K----------------------------- 149 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhcCCC-H-----------------------------
Confidence 1246799999986 4555 59999998864321100 0
Q ss_pred hccCCcchhHHHHHHHHhCCc-ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHH
Q 001507 143 ALGGQKTSLVVEYIMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLK 221 (1065)
Q Consensus 143 ~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~ 221 (1065)
.+...+++++++.+||+ +..++ .+.+|||||||||+|||||+.+|++|||||||+|||+.++..+++.|+
T Consensus 150 ----~~~~~~~~~~l~~~gL~~~~~~~-----~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~ 220 (320)
T PRK13631 150 ----SEAKKLAKFYLNKMGLDDSYLER-----SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLIL 220 (320)
T ss_pred ----HHHHHHHHHHHHHcCCChhHhcC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHH
Confidence 00122477889999996 44443 345799999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 222 HSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 222 ~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++.. .++||++++|+.+++...||+|++|++|++++.|+++++.
T Consensus 221 ~l~~--~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~g~~~~~~ 264 (320)
T PRK13631 221 DAKA--NNKTVFVITHTMEHVLEVADEVIVMDKGKILKTGTPYEIF 264 (320)
T ss_pred HHHH--CCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 8864 3567778999999999999999999999999999988764
No 243
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=6.6e-37 Score=327.76 Aligned_cols=198 Identities=26% Similarity=0.355 Sum_probs=166.3
Q ss_pred eeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHHHHH
Q 001507 716 LVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLL 795 (1065)
Q Consensus 716 l~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e~l~ 795 (1065)
|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 469999999999999999999999999999999876 56899999998764322 12489999999999999999998
Q ss_pred HHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHH
Q 001507 796 FSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAA 875 (1065)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~ 875 (1065)
+......+ .....+..+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|||||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 1223344556788999999987666543 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 876 AIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 876 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLT-NGPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEe-CCcEecccCc
Confidence 9999999998764 899999999986 5778899999998 4788887754
No 244
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=330.41 Aligned_cols=214 Identities=23% Similarity=0.284 Sum_probs=172.9
Q ss_pred EEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCc
Q 001507 688 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGY 764 (1065)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~ 764 (1065)
+.++++++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 8 l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~ 74 (254)
T PRK14273 8 IETENLNLFY-------------TDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGK 74 (254)
T ss_pred EEEeeeEEEe-------------CCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCE
Confidence 5666666544 2356999999999999999999999999999999999987632 25899999998
Q ss_pred cCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccCcccCC
Q 001507 765 PKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLP 835 (1065)
Q Consensus 765 ~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~ 835 (1065)
++.. ..+++.++|++|++.+++ +||+||+.|....+.. .......+.++++++.+++.+ ..++
T Consensus 75 ~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~----- 146 (254)
T PRK14273 75 NIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGT--KDKKKLDEIVEQSLKKSALWNEVKDKLNT----- 146 (254)
T ss_pred ecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhCCchhhHHHHhC-----
Confidence 7531 234567999999988774 8999999886533211 122333456788888888742 2333
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEec
Q 001507 836 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 915 (1065)
Q Consensus 836 ~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 915 (1065)
.+..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|++++ +++|||+++|+++ ++.+.+|++++|.
T Consensus 147 ~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~- 223 (254)
T PRK14273 147 NALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL- 223 (254)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE-
Confidence 236899999999999999999999999999999999999999999999996 4799999999986 5678899999998
Q ss_pred CcEEEEeCCC
Q 001507 916 GGELIYAGPL 925 (1065)
Q Consensus 916 gg~~~~~g~~ 925 (1065)
+|+++..|+.
T Consensus 224 ~G~i~~~g~~ 233 (254)
T PRK14273 224 NGCIEEESST 233 (254)
T ss_pred CCEEEEeCCH
Confidence 5899998875
No 245
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.9e-37 Score=328.63 Aligned_cols=201 Identities=27% Similarity=0.338 Sum_probs=167.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (230)
T TIGR03410 11 GQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFP 88 (230)
T ss_pred CCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccC
Confidence 34579999999999999999999999999999999999876 5689999999875421 12457999999999999
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcC-CCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-LTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
.+|++||+.+....+.. . ..+..+++++.++ +.+..+.. +..||||||||++|||+|+.+|++|+|||
T Consensus 89 ~~tv~~~l~~~~~~~~~---~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDE 157 (230)
T TIGR03410 89 RLTVEENLLTGLAALPR---R---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDE 157 (230)
T ss_pred CCcHHHHHHHHHHhcCc---c---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999886543211 1 1223466777776 44444443 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|. +|+++..|+..
T Consensus 158 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~-~g~i~~~~~~~ 217 (230)
T TIGR03410 158 PTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVME-RGRVVASGAGD 217 (230)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 99999999999999999998764 899999999986 5667899999998 58999998764
No 246
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.3e-36 Score=326.91 Aligned_cols=202 Identities=28% Similarity=0.403 Sum_probs=169.6
Q ss_pred ccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEc-CCCCCCC
Q 001507 710 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCE-QNDIHSP 786 (1065)
Q Consensus 710 ~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~-q~~~~~~ 786 (1065)
++.+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++
T Consensus 31 ~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 31 YREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 456789999999999999999999999999999999999876 568999999986432 23456799997 5567778
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+|++|++.+....+. ....+..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+||||
T Consensus 109 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 180 (236)
T cd03267 109 DLPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEP 180 (236)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 8999999988654332 223334456788899999987776654 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
|+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|++++.|
T Consensus 181 t~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g 236 (236)
T cd03267 181 TIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVID-KGRLLYDG 236 (236)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEe-CCEEEecC
Confidence 9999999999999999999764 899999999986 5678899999998 47887654
No 247
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.1e-37 Score=325.03 Aligned_cols=203 Identities=26% Similarity=0.417 Sum_probs=170.1
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-CCCceEEEEc
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-VPPRTSAYVS 86 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-~~~~~~~yv~ 86 (1065)
++++.++ +..+|+|+||++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++... ..++.++|++
T Consensus 5 ~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~ 78 (208)
T cd03268 5 DLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALI 78 (208)
T ss_pred EEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEec
Confidence 4444443 246999999999999999999999999999999999998765 99999999876432 2245699999
Q ss_pred cccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccc
Q 001507 87 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 166 (1065)
Q Consensus 87 Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 166 (1065)
|++.+++.+||+||+.+....... .+..++++++.+||.+..
T Consensus 79 q~~~~~~~~tv~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~ 120 (208)
T cd03268 79 EAPGFYPNLTARENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSA 120 (208)
T ss_pred CCCccCccCcHHHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHH
Confidence 999889999999999875432110 012367788999998776
Q ss_pred cccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhc
Q 001507 167 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 246 (1065)
Q Consensus 167 ~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~ 246 (1065)
++.+ ..|||||||||+||||++.+|++++|||||+|||+.++..+.+.|+++.+ .+.++++++|+.+++..++
T Consensus 121 ~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~ 193 (208)
T cd03268 121 KKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD--QGITVLISSHLLSEIQKVA 193 (208)
T ss_pred hhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhc
Confidence 6554 46999999999999999999999999999999999999999999998865 3566777899999999999
Q ss_pred ccEEEecCCcEEEEc
Q 001507 247 DDVILLSEGQIVYQG 261 (1065)
Q Consensus 247 D~v~~l~~G~i~~~G 261 (1065)
|++++|++|++++.|
T Consensus 194 d~v~~l~~g~i~~~g 208 (208)
T cd03268 194 DRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEEEECCEEEecC
Confidence 999999999998765
No 248
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=333.40 Aligned_cols=206 Identities=24% Similarity=0.347 Sum_probs=171.9
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~l 788 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+
T Consensus 19 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 19 KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 4579999999999999999999999999999999999876 568999999987532 23345799999999888889
Q ss_pred CHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 789 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
|++||+.+......+ .....+...+.++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||
T Consensus 97 tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEPt 171 (265)
T PRK10253 97 TVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSGGQRQRAWIAMVLAQETAIMLLDEPT 171 (265)
T ss_pred cHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCChHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 999999875211100 00011233456788999999987666543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+.+|++++|. +|++++.|+..
T Consensus 172 ~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 229 (265)
T PRK10253 172 TWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALR-EGKIVAQGAPK 229 (265)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCHH
Confidence 999999999999999999764 899999999986 5788899999998 58999998753
No 249
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-37 Score=336.15 Aligned_cols=202 Identities=25% Similarity=0.331 Sum_probs=169.5
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-----ccccceEEEEcCCCCC-C
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH-S 785 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~~-~ 785 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.. +
T Consensus 13 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 13 DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 4569999999999999999999999999999999999877 568999999987631 1345679999999753 3
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
...|+.||+.+....+ .....+..+.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|||||
T Consensus 91 ~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~laraL~~~p~lllLDE 162 (271)
T PRK13638 91 FYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLSHGQKKRVAIAGALVLQARYLLLDE 162 (271)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4568999998764332 1223334456788999999987766543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+.+|++++|. +|++++.|+.
T Consensus 163 Pt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 220 (271)
T PRK13638 163 PTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLR-QGQILTHGAP 220 (271)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999777999999999986 5667899999998 5899998875
No 250
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.5e-35 Score=364.93 Aligned_cols=123 Identities=25% Similarity=0.360 Sum_probs=101.5
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccCcccCCCCCCCCHHHHHHHHHHHHHHhCC---Ccee
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANP---SIVF 862 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p---~il~ 862 (1065)
.+|+.|++.|...+.. .....+.++.+||... .+.. ...||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~~---------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIPK---------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhchh---------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 3788999888654321 1123578888998753 3433 2579999999999999999999 9999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe-----cCcEEEEeCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 925 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gg~~~~~g~~ 925 (1065)
|||||+|||+.....+++.|+++.++|.|||+++|+++ ....+|+++.|. ++|++++.|++
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999878999999999975 346799999994 47999999975
No 251
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=8.1e-37 Score=334.34 Aligned_cols=209 Identities=28% Similarity=0.386 Sum_probs=172.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCccCCc--------ccccceEEEEcCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQ--------ETFARISGYCEQN 781 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~-~~~G~i~i~g~~~~~--------~~~~~~~~~v~q~ 781 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.++.. ...++.++|++|+
T Consensus 15 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~ 94 (262)
T PRK09984 15 NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQ 94 (262)
T ss_pred CCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccc
Confidence 3467999999999999999999999999999999999987632 236999999987532 1234568999999
Q ss_pred CCCCCCCCHHHHHHHHhhccCCC-----CCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHh
Q 001507 782 DIHSPGLTVLESLLFSAWLRLPS-----EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA 856 (1065)
Q Consensus 782 ~~~~~~ltv~e~l~~~~~~~~~~-----~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~ 856 (1065)
+.+++.+|++||+.+......+. .........+++++++.+++.+..+... ..||||||||++|||||+.
T Consensus 95 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~ 169 (262)
T PRK09984 95 FNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV-----STLSGGQQQRVAIARALMQ 169 (262)
T ss_pred cccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc-----cccCHHHHHHHHHHHHHhc
Confidence 99999999999998753211000 0111233456789999999987666543 5799999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 857 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 857 ~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+|+||+|||||+|||+.++..+.+.|+++++ +|.|||++||+++ .+...+|++++|. +|++++.|+..
T Consensus 170 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~~l~-~g~i~~~g~~~ 238 (262)
T PRK09984 170 QAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIVALR-QGHVFYDGSSQ 238 (262)
T ss_pred CCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCHH
Confidence 9999999999999999999999999999975 4899999999986 4678899999998 57899988764
No 252
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.7e-37 Score=328.33 Aligned_cols=211 Identities=27% Similarity=0.405 Sum_probs=172.5
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC----CceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~----~~~~ 82 (1065)
+++++.++ ..++|+|+||++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.+
T Consensus 4 ~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 4 ENLNAGYG---KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred eeEEeecC---CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCe
Confidence 34444443 246999999999999999999999999999999999999775 9999999987654321 3469
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh-C
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-G 161 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l-g 161 (1065)
+|++|++.+++.+|++||+.++..... . . .....++++++.+ +
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~--~--~--------------------------------~~~~~~~~~l~~~~~ 121 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARR--R--A--------------------------------KRKARLERVYELFPR 121 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcC--c--h--------------------------------hHHHHHHHHHHHHHh
Confidence 999999998999999999988643211 0 0 0011245566776 4
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
+++..++.+ +.||||||||++|||||+.+|++++|||||+|||+.++..+++.|++++. .+++|++++|+.++
T Consensus 122 l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~ 194 (222)
T cd03224 122 LKERRKQLA-----GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARF 194 (222)
T ss_pred hhhhhhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHH
Confidence 666555544 46999999999999999999999999999999999999999999999865 35677779999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+.++||++++|++|++++.|+.+++
T Consensus 195 ~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (222)
T cd03224 195 ALEIADRAYVLERGRVVLEGTAAEL 219 (222)
T ss_pred HHHhccEEEEeeCCeEEEeCCHHHH
Confidence 9999999999999999999987665
No 253
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.1e-37 Score=337.01 Aligned_cols=216 Identities=20% Similarity=0.292 Sum_probs=176.5
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC---------
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--------- 76 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--------- 76 (1065)
++++++.+++ ..+|+|+||++++|++++|+||||||||||+++|+|.+.++ +|+|.++|.++...
T Consensus 6 ~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 6 VKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred EeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhH
Confidence 4556655542 46999999999999999999999999999999999998775 99999999876431
Q ss_pred --CCCceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHH
Q 001507 77 --VPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVE 154 (1065)
Q Consensus 77 --~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 154 (1065)
..++.++|++|++.+++..||+||+.++..... ... . ......++
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~-~~~-~-------------------------------~~~~~~~~ 126 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK-GEP-K-------------------------------EEATARAR 126 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc-CCC-H-------------------------------HHHHHHHH
Confidence 123569999999988888999999987532110 000 0 00122367
Q ss_pred HHHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEE
Q 001507 155 YIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVIS 234 (1065)
Q Consensus 155 ~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~ 234 (1065)
++++.+||.+..|+.+ +.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. +.+|++
T Consensus 127 ~~l~~~gl~~~~~~~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tvi~ 199 (250)
T PRK11264 127 ELLAKVGLAGKETSYP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQE--KRTMVI 199 (250)
T ss_pred HHHHHcCCcchhhCCh-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhc--CCEEEE
Confidence 7889999987666544 569999999999999999999999999999999999999999999988642 566777
Q ss_pred ecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 235 LLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 235 ~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|+.+++.++||++++|++|++++.|+.+++.
T Consensus 200 ~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 200 VTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999887653
No 254
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-36 Score=317.15 Aligned_cols=196 Identities=31% Similarity=0.568 Sum_probs=161.9
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCcc
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYP 765 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~-~~~G~i~i~g~~ 765 (1065)
.++|+|+++.++.. .+++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57889998877431 23567999999999999999999999999999999999986632 568999999987
Q ss_pred CCc--ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHH
Q 001507 766 KRQ--ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTE 843 (1065)
Q Consensus 766 ~~~--~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 843 (1065)
+.. ...++.++|++|++.+++.+||+||+.+....+ .+. ....||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~-----~~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNE-----FVRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------ccc-----chhhCCHH
Confidence 643 235667999999999999999999998753210 122 13579999
Q ss_pred HHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEe
Q 001507 844 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 922 (1065)
Q Consensus 844 qrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~ 922 (1065)
||||++|||||+.+|++|||||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|.+ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 677777766543367788999999985 788765
Q ss_pred C
Q 001507 923 G 923 (1065)
Q Consensus 923 g 923 (1065)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 255
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-37 Score=349.27 Aligned_cols=211 Identities=29% Similarity=0.430 Sum_probs=174.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.+++. .++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+.. ++++++
T Consensus 324 ~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~ 398 (559)
T COG4988 324 ENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQIS 398 (559)
T ss_pred cceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHee
Confidence 3555555443 37999999999999999999999999999999999999876 999999999877653 568899
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC-
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL- 162 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL- 162 (1065)
||+|+|.+|+. |+||||.++.... .++.+.++++..||
T Consensus 399 ~v~Q~p~lf~g-TireNi~l~~~~~----------------------------------------s~e~i~~al~~a~l~ 437 (559)
T COG4988 399 WVSQNPYLFAG-TIRENILLARPDA----------------------------------------SDEEIIAALDQAGLL 437 (559)
T ss_pred eeCCCCccccc-cHHHHhhccCCcC----------------------------------------CHHHHHHHHHHhcHH
Confidence 99999997775 9999999853210 01123344444443
Q ss_pred -----cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecC
Q 001507 163 -----DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQ 237 (1065)
Q Consensus 163 -----~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~ 237 (1065)
+...||.+|+.+ ++|||||+|||++|||++.+++++++||||++||.++.+.|.+.|.++++ ++|+++++|
T Consensus 438 ~~v~~p~GLdt~ige~G-~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~---~ktvl~itH 513 (559)
T COG4988 438 EFVPKPDGLDTVIGEGG-AGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK---QKTVLVITH 513 (559)
T ss_pred HhhcCCCcccchhccCC-CCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh---CCeEEEEEc
Confidence 446789999754 68999999999999999999999999999999999999999999999875 356666888
Q ss_pred CchHHHhhcccEEEecCCcEEEEcCcchHHH
Q 001507 238 PAPEAYELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 238 ~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
....+ .-+|+|++|++|++++.|.++++.+
T Consensus 514 rl~~~-~~~D~I~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 514 RLEDA-ADADRIVVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred ChHHH-hcCCEEEEecCCceeccCCHHHHhh
Confidence 76654 4579999999999999999998853
No 256
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8.1e-37 Score=333.12 Aligned_cols=206 Identities=28% Similarity=0.397 Sum_probs=171.5
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 787 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ 787 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.
T Consensus 12 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (256)
T TIGR03873 12 GGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVP 89 (256)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcccCCHHHHhhheEEecccCccCCC
Confidence 34679999999999999999999999999999999999876 568999999987543 2334569999999877788
Q ss_pred CCHHHHHHHHhh-ccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 788 LTVLESLLFSAW-LRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 788 ltv~e~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
+||+||+.+... .+...........++++++++.+++.+..++.+ ..||||||||++|||||+.+|++++||||
T Consensus 90 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 164 (256)
T TIGR03873 90 LTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGGERQRVHVARALAQEPKLLLLDEP 164 (256)
T ss_pred CCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 999999987521 110000111223456788999999977666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||+.+...+.+.|+++.++|.|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 221 (256)
T TIGR03873 165 TNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLD-GGRVVAAGPP 221 (256)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCCEEEecCH
Confidence 9999999999999999999877899999999987 5778899999998 4789998875
No 257
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4e-37 Score=344.49 Aligned_cols=226 Identities=20% Similarity=0.247 Sum_probs=182.4
Q ss_pred HHHhhhhcCCc-cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC------
Q 001507 6 LRQLRIYRGNR-SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------ 78 (1065)
Q Consensus 6 ~~~~~~~~~~~-~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~------ 78 (1065)
++++++.+... ....+|+||||+|++||+++|+|+||||||||+++|+|++++....+|+|.++|.++.....
T Consensus 15 i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~ 94 (330)
T PRK09473 15 VKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKL 94 (330)
T ss_pred EeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHH
Confidence 35566555422 23579999999999999999999999999999999999997632348999999998754321
Q ss_pred -CceEEEEcccc--ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHH
Q 001507 79 -PRTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY 155 (1065)
Q Consensus 79 -~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 155 (1065)
.+.++||+|++ .+.+.+||.+++.+......... ..+...++.+
T Consensus 95 r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~---------------------------------~~~~~~~~~~ 141 (330)
T PRK09473 95 RAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMS---------------------------------KAEAFEESVR 141 (330)
T ss_pred hcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHH
Confidence 24799999998 67899999999976543221000 0011234778
Q ss_pred HHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEe
Q 001507 156 IMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 235 (1065)
Q Consensus 156 ~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~ 235 (1065)
+++.+||++..+. + ++++++|||||||||+|||||+.+|++||+||||+|||+.++.++++.|+++.++ .+++++++
T Consensus 142 ~L~~vgL~~~~~~-~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~i 218 (330)
T PRK09473 142 MLDAVKMPEARKR-M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMI 218 (330)
T ss_pred HHHHcCCCChHHH-h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEE
Confidence 8999999764322 2 3566789999999999999999999999999999999999999999999998764 36778889
Q ss_pred cCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 236 LQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 236 ~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+|+.+.+..++|+|++|++|++++.|+.+++.
T Consensus 219 THdl~~~~~~~Dri~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 219 THDLGVVAGICDKVLVMYAGRTMEYGNARDVF 250 (330)
T ss_pred ECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999998875
No 258
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1e-36 Score=345.82 Aligned_cols=194 Identities=27% Similarity=0.399 Sum_probs=168.8
Q ss_pred eeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCCCCCCCCH
Q 001507 718 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 718 ~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 9999999999999999999999999999999877 568999999987632 1245679999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+||+.|+.... ......++++++++.+++.+..++.. ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 12233456889999999988777654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 871 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|. +|+++..|++
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLE-DGRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEe-CCEEEEECCH
Confidence 999999999999999765 899999999986 5778899999998 5899998875
No 259
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=332.64 Aligned_cols=201 Identities=28% Similarity=0.358 Sum_probs=170.3
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-----ccccceEEEEcCCCC-CCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HSP 786 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~-~~~ 786 (1065)
+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 469999999999999999999999999999999999876 568999999987631 124567999999963 334
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
..||.||+.+..... .....+..+++.++++.+++.+..++.. ..||||||||++|||+|+.+|++|+||||
T Consensus 93 ~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEP 164 (275)
T PRK13639 93 APTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLSGGQKKRVAIAGILAMKPEIIVLDEP 164 (275)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 579999998764321 1233444566889999999987777654 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||+.++..+.+.|++++++|.|||+++|+++ .+.+.||++++|++ |++++.|+.
T Consensus 165 t~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 221 (275)
T PRK13639 165 TSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIKEGTP 221 (275)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999777999999999986 56778999999984 899998875
No 260
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=331.03 Aligned_cols=205 Identities=22% Similarity=0.296 Sum_probs=169.3
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||++++||++||+||||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (258)
T PRK14241 16 SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPN 95 (258)
T ss_pred CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccc
Confidence 457999999999999999999999999999999999986532 258999999987531 234567999999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
+++.+||+||+.+....+. ........+.++++++.+++.. ..+. .+.+|||||||||+|||||+.+|+
T Consensus 96 ~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~ 168 (258)
T PRK14241 96 PFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDK-----PGGGLSGGQQQRLCIARAIAVEPD 168 (258)
T ss_pred cCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhC-----CcccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999988654331 1122334456788899998842 2222 235899999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe-----cCcEEEEeCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 925 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gg~~~~~g~~ 925 (1065)
+|+|||||+|||+.++..+.+.|++++ +++|||++||+++ ++.+.+|++++|. +.|++++.|+.
T Consensus 169 llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tviivsH~~~-~~~~~~d~i~~l~~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 169 VLLMDEPCSALDPISTLAIEDLINELK-QDYTIVIVTHNMQ-QAARVSDQTAFFNLEATGKPGRLVEIDDT 237 (258)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhCCEEEEEecccCCCCceEEecCCH
Confidence 999999999999999999999999986 4689999999986 5678899999997 25899999875
No 261
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-37 Score=336.19 Aligned_cols=215 Identities=27% Similarity=0.293 Sum_probs=175.9
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++. ...+|+|+||+|++||+++|+||||||||||+++|+|.+.|+ +|+|.++|.++.... .++.+
T Consensus 7 ~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 7 VEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred EEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhE
Confidence 3455555432 245999999999999999999999999999999999999775 999999998875432 23569
Q ss_pred EEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 83 AYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 83 ~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
+|++|++. .++..||+||+.|+....+.. ....+..++++++.+|
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~ 127 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLD----------------------------------KDEVERRVEEALKAVR 127 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCC
Confidence 99999963 455689999998864321100 0001224778899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++.++++.|+++++. +.||++++|+.++
T Consensus 128 L~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--g~tili~tH~~~~ 200 (274)
T PRK13647 128 MWDFRDKPP-----YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ--GKTVIVATHDVDL 200 (274)
T ss_pred CHHHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHH
Confidence 987776655 469999999999999999999999999999999999999999999998653 5677789999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+.++||++++|++|++++.|+++++
T Consensus 201 ~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 201 AAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999998653
No 262
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-36 Score=314.99 Aligned_cols=173 Identities=61% Similarity=0.993 Sum_probs=151.4
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHH
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 792 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 792 (1065)
+.+|+|+||++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++. ..+++.++|++|++.+++.+|++|
T Consensus 20 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~-~~~~~~i~~~~q~~~~~~~~tv~~ 98 (192)
T cd03232 20 RQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD-KNFQRSTGYVEQQDVHSPNLTVRE 98 (192)
T ss_pred eEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH-HHhhhceEEecccCccccCCcHHH
Confidence 5699999999999999999999999999999999997532246899999998764 344567999999998899999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCH
Q 001507 793 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 872 (1065)
Q Consensus 793 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~ 872 (1065)
|+.+...+ + .||||||||++|||||+.+|++|+|||||+|||+
T Consensus 99 ~l~~~~~~-------------------~------------------~LSgGe~qrv~la~al~~~p~vlllDEP~~~LD~ 141 (192)
T cd03232 99 ALRFSALL-------------------R------------------GLSVEQRKRLTIGVELAAKPSILFLDEPTSGLDS 141 (192)
T ss_pred HHHHHHHH-------------------h------------------cCCHHHhHHHHHHHHHhcCCcEEEEeCCCcCCCH
Confidence 99864210 0 4999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 873 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 873 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
.++..+++.|++++++|+|||++||+++.++.+.+|++++|.++|++++.|
T Consensus 142 ~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 142 QAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999887799999999998644567899999998548998865
No 263
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=338.61 Aligned_cols=207 Identities=18% Similarity=0.257 Sum_probs=169.9
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC-C-eeEEEEEECCccCCc---cc----ccceEEEEcCCC-
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-G-IIEGDIYISGYPKRQ---ET----FARISGYCEQND- 782 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~-~-~~~G~i~i~g~~~~~---~~----~~~~~~~v~q~~- 782 (1065)
..+|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.++.. .. +++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 5799999999999999999999999999999999998652 1 468999999987642 11 224699999997
Q ss_pred -CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCce
Q 001507 783 -IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 861 (1065)
Q Consensus 783 -~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il 861 (1065)
.+.|.+|+.+++........ ....++..+++.++++.++|.+..+... ..+.+|||||||||+|||||+.+|+||
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~--~~p~~LSgGq~QRv~iArAL~~~P~ll 175 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLD--VYPHQLSGGMSQRVMIAMAIACRPKLL 175 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHh--CCchhCCHHHHHHHHHHHHHHhCCCEE
Confidence 47888999998876543221 1234455677889999999965321111 123589999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 862 FMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 862 ~lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+||||+|||+.++..++++|+++.+ .|.|||++|||++ .+.+.+|++++|. +|+++..|+.
T Consensus 176 ilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~-~G~ive~g~~ 238 (326)
T PRK11022 176 IADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMY-AGQVVETGKA 238 (326)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999999999976 4999999999986 4667899999998 5899999975
No 264
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-37 Score=341.01 Aligned_cols=217 Identities=19% Similarity=0.257 Sum_probs=176.0
Q ss_pred HHhhhhcCCcc--ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-------C
Q 001507 7 RQLRIYRGNRS--KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------V 77 (1065)
Q Consensus 7 ~~~~~~~~~~~--~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-------~ 77 (1065)
+++++.+.+.. .+.+|+|||++|++||+++|+||||||||||+++|+|.+.|+ +|+|.++|.++... .
T Consensus 6 ~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 6 DNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHH
Confidence 45555554221 246999999999999999999999999999999999999876 99999999887432 1
Q ss_pred CCceEEEEcccc--ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHH
Q 001507 78 PPRTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY 155 (1065)
Q Consensus 78 ~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 155 (1065)
.++.++||+|++ .+++ .||+||+.|+....+.. ..+....+++
T Consensus 83 ~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~~~~----------------------------------~~~~~~~~~~ 127 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFE-DTVEREIIFGPKNFKMN----------------------------------LDEVKNYAHR 127 (286)
T ss_pred HHhheEEEecChHhccch-hhHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHH
Confidence 245799999986 3454 59999998864321100 0011224778
Q ss_pred HHHHhCCc-ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEE
Q 001507 156 IMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVIS 234 (1065)
Q Consensus 156 ~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~ 234 (1065)
+++.+||. +..++. +..|||||||||+|||||+.+|+|++|||||+|||+.++..+.+.|+++.+. .++||++
T Consensus 128 ~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~ 201 (286)
T PRK13646 128 LLMDLGFSRDVMSQS-----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIIL 201 (286)
T ss_pred HHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence 89999996 555544 4569999999999999999999999999999999999999999999998653 4677888
Q ss_pred ecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 235 LLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 235 ~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|+.+++.++||+|++|++|++++.|+++++.
T Consensus 202 vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 202 VSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999987764
No 265
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-36 Score=325.23 Aligned_cols=202 Identities=27% Similarity=0.385 Sum_probs=172.7
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc-cccceEEEEcCCCCCCCCCCH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~~~v~q~~~~~~~ltv 790 (1065)
.+.+|+|+|++++|||+++|+||||||||||+++|+|..+ +..|+|.++|.++... ..++.++|++|++.+++.+|+
T Consensus 12 ~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 12 GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 4579999999999999999999999999999999999877 4689999999876431 234679999999999889999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+||+.+....+. .......+.++++++.+++.+..+..+ ..||+|||||++|||+|+.+|++++|||||+||
T Consensus 90 ~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~gL 161 (232)
T cd03300 90 FENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQRVAIARALVNEPKVLLLDEPLGAL 161 (232)
T ss_pred HHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999987654332 122334456788999999987776654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 871 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|. +|++++.|+.
T Consensus 162 D~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~-~G~~~~~~~~ 215 (232)
T cd03300 162 DLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMN-KGKIQQIGTP 215 (232)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEecCCH
Confidence 999999999999999764 899999999986 5678899999998 4799888863
No 266
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=6.3e-37 Score=335.81 Aligned_cols=216 Identities=21% Similarity=0.342 Sum_probs=177.4
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPR 80 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~ 80 (1065)
+++++.++ ++.+|+|+||++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++
T Consensus 11 ~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 11 RGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhh
Confidence 45555443 346999999999999999999999999999999999998775 999999998765321 235
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+||.||+.++...... .+. ......+.++++.+
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~---~~~------------------------------~~~~~~~~~~l~~~ 131 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQ---LPA------------------------------PLLHSTVMMKLEAV 131 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccC---CCH------------------------------HHHHHHHHHHHHHc
Confidence 699999999889999999999875321100 000 00112367789999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+
T Consensus 132 gl~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~ 205 (269)
T PRK11831 132 GLRGAAKLMP-----SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVP 205 (269)
T ss_pred CChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHH
Confidence 9988776654 469999999999999999999999999999999999999999999998653 3567777999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++..+||++++|++|++++.|+++++.
T Consensus 206 ~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 206 EVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999887763
No 267
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.1e-36 Score=324.41 Aligned_cols=196 Identities=27% Similarity=0.372 Sum_probs=165.5
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCccc-------ccceEEEEcCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQET-------FARISGYCEQNDIHS 785 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~-------~~~~~~~v~q~~~~~ 785 (1065)
..+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.... .++.++|++|++.++
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 369999999999999999999999999999999999876 56899999998764311 135799999999898
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
+.+|+.||+.+....+. .......++++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||
T Consensus 101 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrl~la~al~~~p~llllDE 172 (228)
T PRK10584 101 PTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQLSGGEQQRVALARAFNGRPDVLFADE 172 (228)
T ss_pred CCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999999987653321 122344567889999999977666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEE
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 921 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~ 921 (1065)
||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|.+ |+++.
T Consensus 173 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~i~~ 226 (228)
T PRK10584 173 PTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQLQE 226 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEe
Confidence 99999999999999999999754 899999999986 34 56999999984 78764
No 268
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-37 Score=302.01 Aligned_cols=208 Identities=27% Similarity=0.446 Sum_probs=174.1
Q ss_pred ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC---CceEEEEccccccCCC
Q 001507 18 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAE 94 (1065)
Q Consensus 18 ~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~ 94 (1065)
.+.+|++||++++|||+++|+||||||||||||.|+|.+.|+ +|++.+||.++.+... .+.-+..||+..+-..
T Consensus 13 Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFp 89 (259)
T COG4559 13 GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFP 89 (259)
T ss_pred cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccc
Confidence 356999999999999999999999999999999999999886 9999999999876543 3556899999877666
Q ss_pred CCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcc
Q 001507 95 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 174 (1065)
Q Consensus 95 lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~ 174 (1065)
.||+|-+.++..-.+.+.. +. +..+.++++|...++.+.+...
T Consensus 90 Ftv~eVV~mGr~p~~~g~~-----------------~~---------------e~~~i~~~ala~~d~~~la~R~----- 132 (259)
T COG4559 90 FTVQEVVQMGRIPHRSGRE-----------------PE---------------EDERIAAQALAATDLSGLAGRD----- 132 (259)
T ss_pred eEHHHHHHhcccccccCCC-----------------ch---------------hhHHHHHHHHHHcChhhhhccc-----
Confidence 7999999997543321110 10 1123477888899998876543
Q ss_pred cccCchhhhhhHHHHHHHhc------CCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhccc
Q 001507 175 LKGISGGQKKRLTTGELLVG------PARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 248 (1065)
Q Consensus 175 ~~~LSGGqkqRv~ia~al~~------~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~ 248 (1065)
...|||||||||.+||.|+. ++++||||||||+||...+..+++..++++++ + ..|+.+.||.+.+..+||+
T Consensus 133 y~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDr 210 (259)
T COG4559 133 YRTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADR 210 (259)
T ss_pred hhhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhhe
Confidence 45799999999999999984 44699999999999999999999999999975 3 5566688999999999999
Q ss_pred EEEecCCcEEEEcCcchHH
Q 001507 249 VILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 249 v~~l~~G~i~~~G~~~~~~ 267 (1065)
|++|++||++..|++++++
T Consensus 211 ivll~~Grv~a~g~p~~vl 229 (259)
T COG4559 211 IVLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeeCCeEeecCCHHHhc
Confidence 9999999999999998875
No 269
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.2e-36 Score=321.30 Aligned_cols=191 Identities=24% Similarity=0.360 Sum_probs=162.7
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC---c----ccccceEEEEcCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---Q----ETFARISGYCEQNDI 783 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~~~v~q~~~ 783 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++. . ...++.++|++|++.
T Consensus 9 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~ 86 (206)
T TIGR03608 9 GDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFA 86 (206)
T ss_pred CCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchh
Confidence 34579999999999999999999999999999999999876 56899999998742 1 124567999999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++.+|++||+.+....+. .......+.++++++.+++.+..++.. ..||||||||++|||||+.+|++|+|
T Consensus 87 ~~~~~t~~e~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llll 158 (206)
T TIGR03608 87 LIENETVEENLDLGLKYKK---LSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILA 158 (206)
T ss_pred hccCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999999999998654321 223344566889999999977766654 57999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEE
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 913 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 913 (1065)
||||+|||+.++..+.+.|+++.++|.|||++||++. ..+.+|++++|
T Consensus 159 DEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 159 DEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred eCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 9999999999999999999999777999999999975 34679999875
No 270
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-37 Score=344.48 Aligned_cols=226 Identities=19% Similarity=0.250 Sum_probs=180.4
Q ss_pred HHHhhhhcCCcc-ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC-ceeEEEEECCccCCCCCC-----
Q 001507 6 LRQLRIYRGNRS-KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-QVSGKITYNGHGFKEFVP----- 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~-~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~-~~~G~i~~~g~~~~~~~~----- 78 (1065)
++++++.++.+. ...+|+||||+|++||+++|+|+||||||||+++|+|++.+.. +.+|+|.++|.++.....
T Consensus 6 v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~ 85 (326)
T PRK11022 6 VDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRN 85 (326)
T ss_pred EeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHH
Confidence 456666664422 2579999999999999999999999999999999999986421 358999999998754321
Q ss_pred --CceEEEEcccc--ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHH
Q 001507 79 --PRTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVE 154 (1065)
Q Consensus 79 --~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 154 (1065)
++.++||+|++ .+.|.+||.+++........... ..+..+++.
T Consensus 86 ~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~---------------------------------~~~~~~~~~ 132 (326)
T PRK11022 86 LVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGN---------------------------------KKTRRQRAI 132 (326)
T ss_pred HhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHH
Confidence 23699999998 47888999999876543211000 001123478
Q ss_pred HHHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEE
Q 001507 155 YIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVIS 234 (1065)
Q Consensus 155 ~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~ 234 (1065)
++|+.+||.+..+. -++.+.+|||||||||+|||||+.+|++|++||||+|||+.++..+++.|+++.++ .+.++++
T Consensus 133 ~~L~~~gL~~~~~~--l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~ 209 (326)
T PRK11022 133 DLLNQVGIPDPASR--LDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVL 209 (326)
T ss_pred HHHHHCCCCChHHH--HhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEE
Confidence 89999999752211 12445679999999999999999999999999999999999999999999998764 3567888
Q ss_pred ecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 235 LLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 235 ~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|+.+.+..++|+|++|++|++++.|+.+++.
T Consensus 210 iTHdl~~~~~~adri~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 210 ITHDLALVAEAAHKIIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EeCCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999988875
No 271
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=335.49 Aligned_cols=200 Identities=27% Similarity=0.351 Sum_probs=167.1
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCC--C
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 783 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~--~ 783 (1065)
+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++ .
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 469999999999999999999999999999999999876 568999999987542 23456799999986 3
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
+++ .|++||+.|...... ...++..+.++++++.+++.. ..+.. +..||||||||++|||||+.+|++||
T Consensus 98 ~~~-~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lll 168 (280)
T PRK13649 98 LFE-ETVLKDVAFGPQNFG---VSQEEAEALAREKLALVGISESLFEKN-----PFELSGGQMRRVAIAGILAMEPKILV 168 (280)
T ss_pred hcc-ccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 444 699999987643321 223334456788899999963 44443 35799999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||||+|||+.++..+.+.|++++++|+|||++||+++ .+...+|++++|. +|++++.|+.
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 229 (280)
T PRK13649 169 LDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLE-KGKLVLSGKP 229 (280)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999999777999999999986 5667899999998 5899988875
No 272
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-36 Score=322.07 Aligned_cols=197 Identities=26% Similarity=0.370 Sum_probs=165.7
Q ss_pred ccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCC
Q 001507 710 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND 782 (1065)
Q Consensus 710 ~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~ 782 (1065)
++++.+ |+||++++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++
T Consensus 10 ~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~ 84 (214)
T cd03297 10 LPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQY 84 (214)
T ss_pred cCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCC
Confidence 344555 99999999 9999999999999999999999876 568999999987531 12356799999999
Q ss_pred CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 783 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 783 ~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
.+++.+|++||+.+..... ......++++++++.+++.+..+... ..||||||||++|||+|+.+|++|+
T Consensus 85 ~~~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lll 154 (214)
T cd03297 85 ALFPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLL 154 (214)
T ss_pred ccCCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9998999999998764321 12334456788999999976665543 5799999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|. +|+++..|
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g 214 (214)
T cd03297 155 LDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVME-DGRLQYIG 214 (214)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEE-CCEEEecC
Confidence 99999999999999999999999765 899999999986 4667899999998 47887764
No 273
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.4e-36 Score=337.00 Aligned_cols=224 Identities=19% Similarity=0.245 Sum_probs=178.6
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-eeEEEEEECCcc
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYP 765 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~-~~~G~i~i~g~~ 765 (1065)
-+.++|++..+.. ..+...+|+||||+|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~---------~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFST---------PDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEec---------CCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 3566776655421 012357999999999999999999999999999999999987631 238999999988
Q ss_pred CCc---cc---c-cceEEEEcCCC--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCC
Q 001507 766 KRQ---ET---F-ARISGYCEQND--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPG 836 (1065)
Q Consensus 766 ~~~---~~---~-~~~~~~v~q~~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 836 (1065)
+.. .. + ++.++||+|++ .+.|.+|+.+++.+...... .....+..+++.++++.++|.+..+... ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~~--~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRMK--MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHhc--CC
Confidence 642 11 2 24799999997 67889999999976544322 1234445567888999999865332211 22
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEec
Q 001507 837 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKR 915 (1065)
Q Consensus 837 ~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~ 915 (1065)
+.+|||||||||+|||||+.+|++||+||||++||+.++..++++|+++.++ |.|||++|||++ .+...+|++++|.
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~- 236 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMY- 236 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEE-
Confidence 4689999999999999999999999999999999999999999999999765 899999999986 4667899999998
Q ss_pred CcEEEEeCCC
Q 001507 916 GGELIYAGPL 925 (1065)
Q Consensus 916 gg~~~~~g~~ 925 (1065)
+|++++.|+.
T Consensus 237 ~G~ive~g~~ 246 (330)
T PRK09473 237 AGRTMEYGNA 246 (330)
T ss_pred CCEEEEECCH
Confidence 5899999985
No 274
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=339.08 Aligned_cols=202 Identities=26% Similarity=0.290 Sum_probs=171.4
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCC--CC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IH 784 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~--~~ 784 (1065)
..+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++||+|++ .+
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l 105 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSL 105 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhc
Confidence 579999999999999999999999999999999999876 468999999987643 13456799999997 57
Q ss_pred CCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 785 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 785 ~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
.+.+|+.+++.+...... .....+..+++.++++.++|.+ ..+.. +..|||||||||+|||||+.+|++||+
T Consensus 106 ~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p~~LSgGq~QRv~iArAL~~~P~lLil 178 (327)
T PRK11308 106 NPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----PHMFSGGQRQRIAIARALMLDPDVVVA 178 (327)
T ss_pred CCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----CccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 889999999976543321 1234455667899999999953 44443 358999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||++||..++..++++|+++.++ |.|||++|||++ .+.+.+|++++|. .|++++.|+.
T Consensus 179 DEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~-~G~ive~g~~ 239 (327)
T PRK11308 179 DEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMY-LGRCVEKGTK 239 (327)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999764 999999999986 4667899999998 5899999975
No 275
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-36 Score=328.62 Aligned_cols=207 Identities=23% Similarity=0.299 Sum_probs=166.8
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCC---CCCeeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~---~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 15 DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 457999999999999999999999999999999999962 221248999999987642 234567999999988
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++ .|+.||+.+....+.. ...+...+.++++++.+++.+....... ..+..||||||||++|||+|+.+|++|+|
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lllL 170 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAFALSGGQQQRLCIARAMAVSPSVLLM 170 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 876 5999999876543311 1122334567889999988542211111 12357999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++. +++|||++||+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 171 DEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~-~G~~~~~~~~ 229 (250)
T PRK14245 171 DEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFY-MGEMVEYDDT 229 (250)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999999985 5899999999986 5778899999998 5899999875
No 276
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-36 Score=327.55 Aligned_cols=219 Identities=26% Similarity=0.356 Sum_probs=173.7
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC---CCeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~---~~~~~G~i~i~g 763 (1065)
.+.++|+++.+ +++.+|+|+||++++||+++|+||||||||||+++|+|... ..+.+|+|.++|
T Consensus 6 ~l~~~~l~~~~-------------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 6 KMEARGLSFFY-------------GDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred EEEEeeeEEEE-------------CCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECC
Confidence 46677776554 23569999999999999999999999999999999999742 113689999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCC
Q 001507 764 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 838 (1065)
Q Consensus 764 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 838 (1065)
+++.. ..+++.++|++|++.+++ .||+||+.+....+.. ...+...++++++++.+++.+....... ..+.
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 148 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ESAL 148 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87642 134567999999988887 5999999887543311 1223334567888999888542111111 1235
Q ss_pred CCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 839 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 839 ~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
.|||||||||+|||+|+.+|++|||||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|.+ |+
T Consensus 149 ~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14242 149 GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-GK 225 (253)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999985 4799999999986 56788999999984 79
Q ss_pred EEEeCCC
Q 001507 919 LIYAGPL 925 (1065)
Q Consensus 919 ~~~~g~~ 925 (1065)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14242 226 LIEVGPT 232 (253)
T ss_pred EEEeCCH
Confidence 9988864
No 277
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.8e-36 Score=331.78 Aligned_cols=203 Identities=24% Similarity=0.335 Sum_probs=169.7
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc------cccceEEEEcCCC--C
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQND--I 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~~v~q~~--~ 783 (1065)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... .+++.++|++|++ .
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 4679999999999999999999999999999999999876 5689999999876421 1356799999996 4
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
+.+.+||+||+.+...... ........++++++++.+++. ...+... ..||||||||++|||||+.+|++||
T Consensus 101 ~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~~LSgGe~qrv~laral~~~p~ill 173 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKLP-----RQLSGGQLQRINIARALAVKPKLIV 173 (265)
T ss_pred cCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 6678999999977543111 112233445678999999995 5555443 5799999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ .+...+|++++|. +|++++.|+.
T Consensus 174 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 235 (265)
T TIGR02769 174 LDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMD-KGQIVEECDV 235 (265)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEe-CCEEEEECCH
Confidence 99999999999999999999999765 899999999986 5667899999998 5899999875
No 278
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.1e-36 Score=320.57 Aligned_cols=198 Identities=24% Similarity=0.294 Sum_probs=167.0
Q ss_pred EeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCCHHHH
Q 001507 715 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLES 793 (1065)
Q Consensus 715 il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~ 793 (1065)
+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3569999999999999999999999999999999877 568999999987643 2345679999999999999999999
Q ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHH
Q 001507 794 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 873 (1065)
Q Consensus 794 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~ 873 (1065)
+.+...... . ......++++++++.+++.+..++.. ..||||||||++|||+|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987532211 1 11223456788999999987766543 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 001507 874 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 924 (1065)
Q Consensus 874 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 924 (1065)
++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|. +|+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~-~g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVS-QGKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEE-CCeEEEecC
Confidence 999999999999764 899999999976 5667899999998 589988764
No 279
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.2e-36 Score=325.49 Aligned_cols=202 Identities=30% Similarity=0.407 Sum_probs=172.9
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc-cccceEEEEcCCCCCCCCCCH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~~~v~q~~~~~~~ltv 790 (1065)
++.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|+
T Consensus 12 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 12 SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 4579999999999999999999999999999999999876 5689999999876432 234679999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
.||+.+....+. .......+.++++++.+++.+..+... ..||+||+||++|||+|+.+|++++|||||+||
T Consensus 90 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~L 161 (237)
T TIGR00968 90 RDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGAL 161 (237)
T ss_pred HHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999987654331 122333456788999999977666543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 871 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 162 D~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 215 (237)
T TIGR00968 162 DAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMS-NGKIEQIGSP 215 (237)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEE-CCEEEEecCH
Confidence 999999999999998765 899999999986 5678899999998 5899998875
No 280
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-36 Score=327.85 Aligned_cols=209 Identities=22% Similarity=0.308 Sum_probs=168.5
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC-CeeEEEEEECCccCCc---ccccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-GIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~-~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|+++.. ..+++.++|++|++.+++
T Consensus 13 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~ 92 (246)
T PRK14269 13 GKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV 92 (246)
T ss_pred CCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc
Confidence 345799999999999999999999999999999999997531 2468999999987643 234567999999988887
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.|++||+.+....+.... ......++++++++.+++.+...... ......||||||||++|||||+.+|++|+||||
T Consensus 93 -~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~lllLDEP 169 (246)
T PRK14269 93 -KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKL-KQNALALSGGQQQRLCIARALAIKPKLLLLDEP 169 (246)
T ss_pred -ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 699999988654331111 12233456788999999853211111 112357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|. +|+++..|+.
T Consensus 170 ~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 225 (246)
T PRK14269 170 TSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFH-LGELIEFGES 225 (246)
T ss_pred cccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEE-CCEEEEECCH
Confidence 999999999999999999864 899999999986 5777899999998 5899998874
No 281
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.8e-37 Score=326.91 Aligned_cols=204 Identities=26% Similarity=0.369 Sum_probs=167.8
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPR 80 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~ 80 (1065)
+++++.++ .+..+|+|+||++++|++++|+||||||||||+++|+|.+.|. +|+|.++|.++.... .++
T Consensus 5 ~~l~~~~~--~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 5 HNVSKAYP--GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EeeeEEeC--CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHh
Confidence 44555542 1246999999999999999999999999999999999998765 999999998875432 235
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+||+||+.++....+... ...+..++++++.+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~ 125 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQV 125 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHc
Confidence 79999999998989999999988643221000 00122377889999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. +++|++++|+.+
T Consensus 126 ~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~tH~~~ 198 (214)
T TIGR02673 126 GLEHKADAFP-----EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKR--GTTVIVATHDLS 198 (214)
T ss_pred CChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHH
Confidence 9987666554 469999999999999999999999999999999999999999999998642 567777999999
Q ss_pred HHHhhcccEEEecCCc
Q 001507 241 EAYELFDDVILLSEGQ 256 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~ 256 (1065)
++..+||++++|++|+
T Consensus 199 ~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 199 LVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhcCEEEEecCCC
Confidence 9999999999999985
No 282
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.5e-37 Score=329.99 Aligned_cols=214 Identities=20% Similarity=0.322 Sum_probs=176.2
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-----CCCce
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRT 81 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-----~~~~~ 81 (1065)
+++++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|.+.|+ +|+|.++|.++... ..++.
T Consensus 5 ~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 5 KNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhc
Confidence 34555443 246999999999999999999999999999999999998775 99999999887542 12457
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhc-cCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQC-QGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
++|++|++.+++.+||+||+.++... .+. + .......++++++.+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~----~------------------------------~~~~~~~~~~~l~~~ 124 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGA----S------------------------------KEEAEKQARELLAKV 124 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCC----C------------------------------HHHHHHHHHHHHHHc
Confidence 99999999888889999999875321 100 0 000122367889999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||++..+..+ +.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+. +++|++++|+.+
T Consensus 125 gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~ 197 (240)
T PRK09493 125 GLAERAHHYP-----SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEE--GMTMVIVTHEIG 197 (240)
T ss_pred CChHHHhcCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHH
Confidence 9987666544 469999999999999999999999999999999999999999999988642 567777999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++..+||++++|++|++++.|+..++.
T Consensus 198 ~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 198 FAEKVASRLIFIDKGRIAEDGDPQVLI 224 (240)
T ss_pred HHHHhCCEEEEEECCEEEeeCCHHHHh
Confidence 999999999999999999999887653
No 283
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=363.61 Aligned_cols=210 Identities=22% Similarity=0.332 Sum_probs=176.6
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+||||++++||++||+||||||||||+++|+|..++++.+|+|.++|.++... ..++.+|||+|++.+++
T Consensus 16 ~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 95 (506)
T PRK13549 16 GGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVK 95 (506)
T ss_pred CCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCC
Confidence 34579999999999999999999999999999999999876433689999999876432 12456999999998889
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+||+||+.+....+...........++++++++.+++.+..+..+ ..|||||||||+|||||+.+|+|||||||
T Consensus 96 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEP 170 (506)
T PRK13549 96 ELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGLGQQQLVEIAKALNKQARLLILDEP 170 (506)
T ss_pred CCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999988653321111122334456889999999987766654 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
|+|||+.++..+++.|++++++|.|||++||+++ .+...||++++|+ +|++++.|+..+
T Consensus 171 t~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~-~G~i~~~~~~~~ 229 (506)
T PRK13549 171 TASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIR-DGRHIGTRPAAG 229 (506)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEE-CCEEeeeccccc
Confidence 9999999999999999999877999999999986 5677899999998 589999998754
No 284
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.2e-36 Score=325.58 Aligned_cols=218 Identities=33% Similarity=0.480 Sum_probs=172.1
Q ss_pred HHHhhhhcCCcc-ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEE
Q 001507 6 LRQLRIYRGNRS-KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAY 84 (1065)
Q Consensus 6 ~~~~~~~~~~~~-~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~y 84 (1065)
++++.+.+.+.. .+++|+|+||++++||+++|+||||||||||+++|+|.+++..+.+|+|.++|.++.....++.++|
T Consensus 6 ~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~ 85 (226)
T cd03234 6 WWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAY 85 (226)
T ss_pred eecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEE
Confidence 445666654332 4679999999999999999999999999999999999987211249999999987754344567999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHH-HHHHhCCc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY-IMKILGLD 163 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~l~~lgL~ 163 (1065)
++|++.+++.+||+||+.|+........... ......++. .++.+++.
T Consensus 86 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~l~~~~l~ 134 (226)
T cd03234 86 VRQDDILLPGLTVRETLTYTAILRLPRKSSD-------------------------------AIRKKRVEDVLLRDLALT 134 (226)
T ss_pred eCCCCccCcCCcHHHHHHHHHHhhcccccch-------------------------------HHHHHHHHHHHHHhhcch
Confidence 9999998999999999998654321100000 000112344 78888887
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc-hHH
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA-PEA 242 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~-~~~ 242 (1065)
+..++. ++.||||||||++|||||+.+|++++|||||+|||+.++..+.+.++++.+. +.++++++|+. +++
T Consensus 135 ~~~~~~-----~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~--~~tiii~sh~~~~~~ 207 (226)
T cd03234 135 RIGGNL-----VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR--NRIVILTIHQPRSDL 207 (226)
T ss_pred hhhccc-----ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCCCHHH
Confidence 665544 4569999999999999999999999999999999999999999999988643 45666678887 689
Q ss_pred HhhcccEEEecCCcEEEEc
Q 001507 243 YELFDDVILLSEGQIVYQG 261 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G 261 (1065)
.++||++++|++|++++.|
T Consensus 208 ~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 208 FRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHhCCEEEEEeCCEEEecC
Confidence 9999999999999998875
No 285
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-36 Score=328.28 Aligned_cols=216 Identities=23% Similarity=0.302 Sum_probs=174.6
Q ss_pred eeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEEC
Q 001507 686 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYIS 762 (1065)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~--~-~~~~G~i~i~ 762 (1065)
..+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ + .+.+|+|.++
T Consensus 12 ~~l~~~~l~~~~-------------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~ 78 (260)
T PRK10744 12 SKIQVRNLNFYY-------------GKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLD 78 (260)
T ss_pred ceEEEEEEEEEe-------------CCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEEC
Confidence 346677776554 23469999999999999999999999999999999999864 1 1368999999
Q ss_pred CccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccCccc
Q 001507 763 GYPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIG 833 (1065)
Q Consensus 763 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~ 833 (1065)
|.++.. ..+++.++|++|++.+++ .|++||+.+....+. ........++++++++.+++.+ ..+.
T Consensus 79 g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 152 (260)
T PRK10744 79 GENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQ--- 152 (260)
T ss_pred CEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhc---
Confidence 987632 234567999999988877 899999987653221 1223334456788999998742 2222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEE
Q 001507 834 LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 913 (1065)
Q Consensus 834 ~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 913 (1065)
....||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++. ++.|||++||+++ .+...+|++++|
T Consensus 153 --~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l 228 (260)
T PRK10744 153 --SGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFM 228 (260)
T ss_pred --CCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEE
Confidence 235799999999999999999999999999999999999999999999985 4789999999986 566789999999
Q ss_pred ecCcEEEEeCCC
Q 001507 914 KRGGELIYAGPL 925 (1065)
Q Consensus 914 ~~gg~~~~~g~~ 925 (1065)
+ +|+++..|+.
T Consensus 229 ~-~G~i~~~g~~ 239 (260)
T PRK10744 229 Y-LGELIEFGNT 239 (260)
T ss_pred E-CCEEEEeCCH
Confidence 8 5899998874
No 286
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-37 Score=340.26 Aligned_cols=218 Identities=22% Similarity=0.307 Sum_probs=175.8
Q ss_pred HHHhhhhcCCcc--ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-------
Q 001507 6 LRQLRIYRGNRS--KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF------- 76 (1065)
Q Consensus 6 ~~~~~~~~~~~~--~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~------- 76 (1065)
++++++.+++.. .+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++...
T Consensus 5 ~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 5 FENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHH
Confidence 345566554321 246999999999999999999999999999999999999876 99999999876432
Q ss_pred CCCceEEEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHH
Q 001507 77 VPPRTSAYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY 155 (1065)
Q Consensus 77 ~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 155 (1065)
..++.++|++|++. .+..+||+||+.|+....... . .+...++++
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~---~-------------------------------~~~~~~~~~ 127 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFS---E-------------------------------DEAKEKALK 127 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCC---H-------------------------------HHHHHHHHH
Confidence 12346999999962 333589999998864321100 0 001224778
Q ss_pred HHHHhCCc-ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEE
Q 001507 156 IMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVIS 234 (1065)
Q Consensus 156 ~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~ 234 (1065)
+++.+||. +..++.+ +.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+++|++
T Consensus 128 ~l~~~gL~~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvli 200 (287)
T PRK13641 128 WLKKVGLSEDLISKSP-----FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVIL 200 (287)
T ss_pred HHHHcCCChhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEE
Confidence 89999996 4555544 46999999999999999999999999999999999999999999999864 3677788
Q ss_pred ecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 235 LLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 235 ~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|+.+++.++||++++|++|++++.|+++++.
T Consensus 201 vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 201 VTHNMDDVAEYADDVLVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999987664
No 287
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-37 Score=324.21 Aligned_cols=197 Identities=28% Similarity=0.428 Sum_probs=166.9
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC--CCceEEEEccccccCCCCC
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 96 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~--~~~~~~yv~Q~~~~~~~lT 96 (1065)
..+|+|+||++++| +++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 46999999999999 99999999999999999999998775 999999998765421 2457999999999899999
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccc
Q 001507 97 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 176 (1065)
Q Consensus 97 v~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 176 (1065)
|+||+.+.....+... .+.+..++++++.+||++..++.+ .
T Consensus 89 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 129 (211)
T cd03264 89 VREFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKI-----G 129 (211)
T ss_pred HHHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCch-----h
Confidence 9999987543221000 001223778899999987776655 4
Q ss_pred cCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCc
Q 001507 177 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 256 (1065)
Q Consensus 177 ~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~ 256 (1065)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|++++|+.+++.+++|++++|++|+
T Consensus 130 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 130 SLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998863 3 677889999999999999999999999
Q ss_pred EEEEc
Q 001507 257 IVYQG 261 (1065)
Q Consensus 257 i~~~G 261 (1065)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 288
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=343.36 Aligned_cols=190 Identities=24% Similarity=0.365 Sum_probs=167.0
Q ss_pred eeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCCCCCCCCH
Q 001507 718 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 718 ~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 568999999987532 1245679999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+||+.|+.. ....++++++++.+++.+..+..+ ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988532 112345789999999987776654 589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 871 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|+ +|+++..|++
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~-~G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLE-QGKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEe-CCEEEEecCH
Confidence 999999999999999765 899999999986 6788899999998 5899999875
No 289
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.2e-36 Score=327.75 Aligned_cols=215 Identities=25% Similarity=0.390 Sum_probs=175.4
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC--CCceEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAY 84 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~--~~~~~~y 84 (1065)
+++++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... ..+.++|
T Consensus 5 ~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 5 AGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEE
Confidence 34555443 246999999999999999999999999999999999998775 999999998765422 2246999
Q ss_pred EccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 85 VSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 85 v~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
++|++.+++.+|++||+.+.....+... ......++++++.+||++
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~ 124 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAE 124 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChh
Confidence 9999988889999999987543221000 001123678899999987
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..++.+ ..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++. .++++++++|+.+++..
T Consensus 125 ~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~ 198 (236)
T TIGR03864 125 RADDKV-----RELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRD-QGLSVLWATHLVDEIEA 198 (236)
T ss_pred hhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecChhhHhh
Confidence 766654 469999999999999999999999999999999999999999999998753 35667779999999865
Q ss_pred hcccEEEecCCcEEEEcCcchHHH
Q 001507 245 LFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
+|++++|++|++++.|+++++.+
T Consensus 199 -~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 199 -DDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred -CCEEEEEeCCeEEEeCCHHHHHH
Confidence 99999999999999998876643
No 290
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-36 Score=328.44 Aligned_cols=220 Identities=23% Similarity=0.281 Sum_probs=175.1
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~---~~~~G~i~i~g 763 (1065)
.+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~-------------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFY-------------GEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEE-------------CCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 46677776554 335799999999999999999999999999999999998652 13689999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCC
Q 001507 764 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 838 (1065)
Q Consensus 764 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 838 (1065)
.++.. ..+++.++|++|++.+++. |+.||+.|....+.. ........++++++++.+++.+....... ..+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87642 2345679999999888875 999999987543311 11223334567889999998542111111 1235
Q ss_pred CCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 839 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 839 ~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+...+|++++|. +|+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~-~G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH-LGN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999865 789999999986 5667899999998 589
Q ss_pred EEEeCCC
Q 001507 919 LIYAGPL 925 (1065)
Q Consensus 919 ~~~~g~~ 925 (1065)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9988864
No 291
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-37 Score=346.44 Aligned_cols=214 Identities=27% Similarity=0.473 Sum_probs=179.4
Q ss_pred cceeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECC
Q 001507 684 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 763 (1065)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g 763 (1065)
.++.++.+|+++.++ +++++++|+|+++++|+.+||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 455666678777653 23489999999999999999999999999999999999987 5789999999
Q ss_pred ccC---CcccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccC------cccC
Q 001507 764 YPK---RQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGA------LIGL 834 (1065)
Q Consensus 764 ~~~---~~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~------~~~~ 834 (1065)
.+. +...+++.++||+|++.+++. |++||+.++. + +.+ ++.+.++++..++.+..+. .+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~----~-~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLAR----P-DAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccC----C-cCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 875 346788999999999999876 9999998752 1 122 3446788888888766543 3443
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe
Q 001507 835 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 914 (1065)
Q Consensus 835 ~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 914 (1065)
+.++|||||+|||++||||+.+++++++||||++||.++.+.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 3568999999999999999999999999999999999999999999999875 599999999974 567789999998
Q ss_pred cCcEEEEeCCCC
Q 001507 915 RGGELIYAGPLG 926 (1065)
Q Consensus 915 ~gg~~~~~g~~~ 926 (1065)
+|+++..|...
T Consensus 529 -~G~l~~~g~~~ 539 (559)
T COG4988 529 -NGRLVEQGTHE 539 (559)
T ss_pred -CCceeccCCHH
Confidence 58999999764
No 292
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4e-37 Score=326.94 Aligned_cols=204 Identities=26% Similarity=0.361 Sum_probs=168.0
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCce
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRT 81 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~~ 81 (1065)
++++.+++. +.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.
T Consensus 5 ~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 5 NVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred EEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHh
Confidence 444444321 46999999999999999999999999999999999998775 999999998775432 2356
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
++|++|++.+++.+||+||+.++....+.. . ......++++++.+|
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~ 125 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVP--P--------------------------------REIRKRVPAALELVG 125 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcC
Confidence 999999999899999999998864322100 0 001123678899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|++..++.+ .+||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+. +++|++++|+.++
T Consensus 126 l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tiiivtH~~~~ 198 (214)
T cd03292 126 LSHKHRALP-----AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKA--GTTVVVATHAKEL 198 (214)
T ss_pred CHHHhhCCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHH
Confidence 987666554 469999999999999999999999999999999999999999999998642 5677779999999
Q ss_pred HHhhcccEEEecCCcE
Q 001507 242 AYELFDDVILLSEGQI 257 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i 257 (1065)
+.++||++++|++|++
T Consensus 199 ~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 199 VDTTRHRVIALERGKL 214 (214)
T ss_pred HHHhCCEEEEEeCCcC
Confidence 9999999999999974
No 293
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.8e-37 Score=339.99 Aligned_cols=212 Identities=22% Similarity=0.385 Sum_probs=174.2
Q ss_pred cceeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECC
Q 001507 684 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 763 (1065)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g 763 (1065)
.+-+++|+|+++.+. +++++|+++||+|++||.+||+|+|||||||++++|.+... .+|+|+|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 344689999988763 34569999999999999999999999999999999999765 479999999
Q ss_pred ccCC---cccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccCccc
Q 001507 764 YPKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIG 833 (1065)
Q Consensus 764 ~~~~---~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~ 833 (1065)
+++. .+.+|+.+||||||..+|.+ ||.+|+.|+. .+.+. +.|-++.+..++.+. -.+.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn-----~sas~----eeV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGN-----PSASD----EEVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCC-----CCcCH----HHHHHHHHHcCcHHHHHhccccchhhHh
Confidence 8864 46788999999999888754 9999999863 22232 234455555555432 233455
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEE
Q 001507 834 LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 913 (1065)
Q Consensus 834 ~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 913 (1065)
..+ ..|||||||||+||||++.+|+|+++|||||.||.++.+.+++.+.+. ..|+|+|++.|+.+ +...||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l~--ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRLD--LLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecch--hHhcCCEEEEE
Confidence 443 469999999999999999999999999999999999999999999994 46999999999965 67889999999
Q ss_pred ecCcEEEEeCCC
Q 001507 914 KRGGELIYAGPL 925 (1065)
Q Consensus 914 ~~gg~~~~~g~~ 925 (1065)
++ |++...|+.
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 85 789988875
No 294
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=331.41 Aligned_cols=209 Identities=25% Similarity=0.395 Sum_probs=170.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC------eeEEEEEECCccCCc---ccccceEEEEcCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------IIEGDIYISGYPKRQ---ETFARISGYCEQN 781 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~------~~~G~i~i~g~~~~~---~~~~~~~~~v~q~ 781 (1065)
+++.+|+|+||+|++||+++|+||||||||||+++|+|..++. ..+|+|.++|.++.. ..+++.++|++|+
T Consensus 12 ~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~ 91 (272)
T PRK13547 12 RHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQA 91 (272)
T ss_pred CCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEeccc
Confidence 3467999999999999999999999999999999999987621 027999999987632 2345568999999
Q ss_pred CCCCCCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHH-----
Q 001507 782 DIHSPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV----- 855 (1065)
Q Consensus 782 ~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~----- 855 (1065)
+..++.+|++||+.+....... ......+..+.++++++.+++.+..++.. ..|||||||||+|||+|+
T Consensus 92 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~~~~ 166 (272)
T PRK13547 92 AQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV-----TTLSGGELARVQFARVLAQLWPP 166 (272)
T ss_pred CCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhccccc
Confidence 8766679999999875321110 01111233456788999999987666543 579999999999999999
Q ss_pred ----hCCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 856 ----ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 856 ----~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ .+...+|++++|. +|++++.|+..
T Consensus 167 ~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 240 (272)
T PRK13547 167 HDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLA-DGAIVAHGAPA 240 (272)
T ss_pred cccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCeEEEecCHH
Confidence 599999999999999999999999999999765 899999999986 5667899999998 58999988753
No 295
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-36 Score=330.66 Aligned_cols=201 Identities=24% Similarity=0.348 Sum_probs=170.2
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC-CCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPG 787 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~-~~~~ 787 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++. .++.
T Consensus 21 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 21 ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 3569999999999999999999999999999999999876 568999999987643 234667999999974 5677
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
+|++||+.+..... ....++..+.++++++.+++.+..++.. ..||||||||++|||||+.+|++|+|||||
T Consensus 99 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~lllLDEP~ 170 (271)
T PRK13632 99 ATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSGGQKQRVAIASVLALNPEIIIFDEST 170 (271)
T ss_pred ccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998864322 1223334556789999999987766654 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||+.++..+++.|++++++ ++|||+++|+++ ++ ..+|++++|. +|+++..|+.
T Consensus 171 ~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~-~G~i~~~g~~ 226 (271)
T PRK13632 171 SMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFS-EGKLIAQGKP 226 (271)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999766 599999999986 34 4799999998 5899888875
No 296
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-37 Score=342.01 Aligned_cols=207 Identities=19% Similarity=0.216 Sum_probs=174.2
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCceEEEEcccc--c
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 90 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~~~~yv~Q~~--~ 90 (1065)
+.+|+||||+|++||+++|+|+||||||||+++|+|++.+. +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999998765 899999998875432 245799999997 5
Q ss_pred cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc-ccccc
Q 001507 91 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTL 169 (1065)
Q Consensus 91 ~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~-~~~t~ 169 (1065)
+.+.+||.+++.+......... ..+...++.++++.+||.. ..++
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~gL~~~~~~~- 150 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLS---------------------------------AAERREKALAMMAKVGLRPEHYDR- 150 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCC---------------------------------HHHHHHHHHHHHHHCCCChHHhcC-
Confidence 7888999999977543221000 0011234788999999963 4454
Q ss_pred ccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccE
Q 001507 170 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 249 (1065)
Q Consensus 170 vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v 249 (1065)
.++.|||||||||+|||||+.+|++|++||||+|||..++.++++.|+++.++ .++++++++|+...+..++|+|
T Consensus 151 ----~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 151 ----YPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ----CCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 44579999999999999999999999999999999999999999999998764 3567888999999999999999
Q ss_pred EEecCCcEEEEcCcchHH
Q 001507 250 ILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 250 ~~l~~G~i~~~G~~~~~~ 267 (1065)
++|++|++++.|+.+++.
T Consensus 226 ~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999988875
No 297
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-36 Score=323.89 Aligned_cols=199 Identities=27% Similarity=0.383 Sum_probs=170.8
Q ss_pred EeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-ccccceEEEEcCCCCCCCCCCHHHH
Q 001507 715 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLES 793 (1065)
Q Consensus 715 il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~~~v~q~~~~~~~ltv~e~ 793 (1065)
+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999876 568999999987643 1234679999999999989999999
Q ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHH
Q 001507 794 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 873 (1065)
Q Consensus 794 l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~ 873 (1065)
+.+..... ........+.+.++++.+++.+..++.+ ..||||||||++|||||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223334456788999999987776654 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 874 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 874 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
++..+.+.|++++.+ |+|||++||++. ++.+.+|++++|. +|++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIML-NGKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999998764 999999999986 5677899999998 4799988875
No 298
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-37 Score=291.71 Aligned_cols=213 Identities=22% Similarity=0.307 Sum_probs=179.7
Q ss_pred cccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--------------
Q 001507 703 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------------- 768 (1065)
Q Consensus 703 ~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------------- 768 (1065)
+.+..+.++...+|++||++.+.|+++.|+|.|||||||+|+||.-+.+ |..|.|.+||..+..
T Consensus 9 v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~ 86 (256)
T COG4598 9 VEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKR 86 (256)
T ss_pred hhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHH
Confidence 3445566788899999999999999999999999999999999998766 568999999975311
Q ss_pred --ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHH
Q 001507 769 --ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRK 846 (1065)
Q Consensus 769 --~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrq 846 (1065)
..+|...|+|+|+..++..+||.||+.-+..-- ...++.+..++.+..+...|+.+.++... ..|||||+|
T Consensus 87 q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhV--Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQ 159 (256)
T COG4598 87 QLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHV--LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQ 159 (256)
T ss_pred HHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHh--hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHH
Confidence 123445799999999999999999997543211 12345666677888999999988877543 479999999
Q ss_pred HHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 847 RLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 847 r~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|++|||||+.+|+++++|||||.|||+-.-++++.+++|+++|+|.+++||.+.. ..+...++++|. .|.+...||+.
T Consensus 160 R~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh-~G~iEE~G~P~ 237 (256)
T COG4598 160 RVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLH-QGKIEEEGPPE 237 (256)
T ss_pred HHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEee-cceecccCChH
Confidence 9999999999999999999999999999999999999999999999999999764 445678999998 58999999973
No 299
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=6e-37 Score=327.13 Aligned_cols=208 Identities=19% Similarity=0.303 Sum_probs=167.5
Q ss_pred HHhhhhcCCc-cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC-------
Q 001507 7 RQLRIYRGNR-SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------- 78 (1065)
Q Consensus 7 ~~~~~~~~~~-~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~------- 78 (1065)
+++++.+++. ..+++|+|+||++++|++++|+|||||||||||++|+|.+.|. +|+|.++|.++.....
T Consensus 5 ~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 5 ENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHH
Confidence 3455555322 2256999999999999999999999999999999999998775 9999999988754321
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++.+||+||+.+....... +. .+....+.++++
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~----~~------------------------------~~~~~~~~~~l~ 127 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKK----SV------------------------------KEAKERAYEMLE 127 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCC----CH------------------------------HHHHHHHHHHHH
Confidence 14699999999888889999999885432110 00 001123677899
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||++..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+.+|++++|+
T Consensus 128 ~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~ 201 (221)
T TIGR02211 128 KVGLEHRINHRP-----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRE-LNTSFLVVTHD 201 (221)
T ss_pred HcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCC
Confidence 999987666554 469999999999999999999999999999999999999999999988653 24667778999
Q ss_pred chHHHhhcccEEEecCCcEE
Q 001507 239 APEAYELFDDVILLSEGQIV 258 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~ 258 (1065)
.+++.. +|++++|++|+++
T Consensus 202 ~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 202 LELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred HHHHhh-cCEEEEEeCCEec
Confidence 988755 7999999999975
No 300
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-37 Score=332.06 Aligned_cols=216 Identities=19% Similarity=0.326 Sum_probs=176.7
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCce
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRT 81 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~ 81 (1065)
++++++.++ ++.+|+|+||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.
T Consensus 6 ~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 6 AKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred EeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhC
Confidence 345555553 246999999999999999999999999999999999998775 999999998875432 2356
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
++|++|++.+++.+||+||+.+....... .+ ....+..++++++.+|
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~---~~------------------------------~~~~~~~~~~~l~~~~ 126 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDD---LS------------------------------AEQREDRANELMEEFH 126 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccc---cC------------------------------HHHHHHHHHHHHHHcC
Confidence 99999999888889999999875322100 00 0001234778899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..+.. .+.|||||||||+||||++.+|++++|||||+|||+.++..+.+.++.++. .+.+|++++|+.++
T Consensus 127 l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiii~sH~~~~ 199 (241)
T PRK10895 127 IEHLRDSM-----GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD--SGLGVLITDHNVRE 199 (241)
T ss_pred CHHHhhcc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEEcCHHH
Confidence 98765544 456999999999999999999999999999999999999999999998764 35677778999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+.++||++++|++|++++.|+++++.
T Consensus 200 ~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 200 TLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred HHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 99999999999999999999887653
No 301
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-37 Score=331.94 Aligned_cols=210 Identities=26% Similarity=0.371 Sum_probs=172.5
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVS 86 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~ 86 (1065)
+++++.+++ +.+|+|+||+|++|++++|+|||||||||||++|+|.+.|+ +|+|.++|.++.. ....++|++
T Consensus 5 ~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~--~~~~~~~v~ 76 (255)
T PRK11248 5 SHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEG--PGAERGVVF 76 (255)
T ss_pred EEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCC--CCCcEEEEe
Confidence 345554432 46999999999999999999999999999999999998775 9999999987653 234589999
Q ss_pred cccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccc
Q 001507 87 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 166 (1065)
Q Consensus 87 Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 166 (1065)
|++.+++.+||+||+.++....+.. . ......++++++.+||.+..
T Consensus 77 q~~~~~~~~tv~e~l~~~~~~~~~~---~-------------------------------~~~~~~~~~~l~~~gl~~~~ 122 (255)
T PRK11248 77 QNEGLLPWRNVQDNVAFGLQLAGVE---K-------------------------------MQRLEIAHQMLKKVGLEGAE 122 (255)
T ss_pred CCCccCCCCcHHHHHHhHHHHcCCC---H-------------------------------HHHHHHHHHHHHHcCChhHh
Confidence 9998888899999998754321100 0 00112377889999998766
Q ss_pred cccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhc
Q 001507 167 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 246 (1065)
Q Consensus 167 ~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~ 246 (1065)
++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++..+|
T Consensus 123 ~~~~-----~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tviivsH~~~~~~~~~ 196 (255)
T PRK11248 123 KRYI-----WQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQE-TGKQVLLITHDIEEAVFMA 196 (255)
T ss_pred hCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhC
Confidence 6544 469999999999999999999999999999999999999999999988543 3566777999999999999
Q ss_pred ccEEEec--CCcEEEEcCcc
Q 001507 247 DDVILLS--EGQIVYQGPRV 264 (1065)
Q Consensus 247 D~v~~l~--~G~i~~~G~~~ 264 (1065)
|++++|+ +|+++..++..
T Consensus 197 d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 197 TELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred CEEEEEeCCCcEEEEEecCC
Confidence 9999998 59999988653
No 302
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=327.79 Aligned_cols=197 Identities=25% Similarity=0.354 Sum_probs=166.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~l 788 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++ .
T Consensus 15 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (241)
T PRK14250 15 GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-G 91 (241)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcChHHhhhcEEEEecCchhch-h
Confidence 4579999999999999999999999999999999999876 568999999987532 234567999999988876 6
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
|++||+.+....+ . ...++++++++.+++. +..++. +..||||||||++|||||+.+|++|+|||||
T Consensus 92 tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt 159 (241)
T PRK14250 92 TVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSGGEAQRVSIARTLANNPEVLLLDEPT 159 (241)
T ss_pred hHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 9999998653221 1 1124567889999996 444443 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|. +|+++..|++
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 216 (241)
T PRK14250 160 SALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLN-KGILVEYAKT 216 (241)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEe-CCEEEEeCCH
Confidence 999999999999999999764 899999999986 5677899999998 5789888875
No 303
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-37 Score=335.93 Aligned_cols=217 Identities=24% Similarity=0.330 Sum_probs=177.9
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|.++|. +|+|.++|+++.... .++.+
T Consensus 8 ~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 8 VEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred EEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhhe
Confidence 4556665532 1245999999999999999999999999999999999999876 999999999875432 24579
Q ss_pred EEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 83 AYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 83 ~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
+|++|++. .++..||+||+.++....+.. ..+....++++++.+|
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 129 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVP----------------------------------REEMVERVDQALRQVG 129 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCC----------------------------------HHHHHHHHHHHHHHcC
Confidence 99999974 577789999998864322100 0001224788899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+++.|+++++. .++||++++|+.++
T Consensus 130 L~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-~~~tilivsH~~~~ 203 (279)
T PRK13635 130 MEDFLNREP-----HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQ-KGITVLSITHDLDE 203 (279)
T ss_pred ChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-CCCEEEEEecCHHH
Confidence 988776655 469999999999999999999999999999999999999999999998753 36777779999998
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+. .||++++|++|++++.|+.+++.
T Consensus 204 ~~-~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 204 AA-QADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HH-cCCEEEEEECCEEEEECCHHHHh
Confidence 86 59999999999999999987764
No 304
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-37 Score=374.47 Aligned_cols=221 Identities=25% Similarity=0.386 Sum_probs=184.2
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC---CceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~---~~~~ 82 (1065)
++++++.|+.+++.+||+|+|+++++|+.+||||||||||||.+.+|-..+.|+ +|.|.+||.++++... |+++
T Consensus 990 ~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i 1066 (1228)
T KOG0055|consen 990 FRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQI 1066 (1228)
T ss_pred EeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhc
Confidence 578899999999999999999999999999999999999999999999998775 9999999999987753 6789
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|.|.|+|.+|.. |+||||.++.. ....+.+.++++.. +.-==..+|
T Consensus 1067 ~lVsQEP~LF~~-TIrENI~YG~~----~vs~~eIi~Aak~A-----------------------------NaH~FI~sL 1112 (1228)
T KOG0055|consen 1067 GLVSQEPVLFNG-TIRENIAYGSE----EVSEEEIIEAAKLA-----------------------------NAHNFISSL 1112 (1228)
T ss_pred ceeccCchhhcc-cHHHHHhccCC----CCCHHHHHHHHHHh-----------------------------hhHHHHhcC
Confidence 999999998874 99999999721 11112222222111 000113579
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++.+||.||+++. +||||||||++||||+++||+||||||.||+||+++.+-+.+.|.+... ++|+|+ +.|-.+.
T Consensus 1113 P~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~--gRT~Iv-IAHRLST- 1187 (1228)
T KOG0055|consen 1113 PQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAME--GRTTIV-IAHRLST- 1187 (1228)
T ss_pred cCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhc--CCcEEE-Eecchhh-
Confidence 9999999999876 7999999999999999999999999999999999999999999998743 566666 5666554
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
.+.||.|+|+++|+|+++|++++++.
T Consensus 1188 IqnaD~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1188 IQNADVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred hhcCCEEEEEECCEEEecccHHHHHh
Confidence 46789999999999999999999975
No 305
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-36 Score=345.18 Aligned_cols=195 Identities=25% Similarity=0.394 Sum_probs=169.9
Q ss_pred CceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-------CCCceEEEEccccccCCCCC
Q 001507 24 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 96 (1065)
Q Consensus 24 ~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lT 96 (1065)
|+||++++||+++|+|||||||||||++|+|.+.|+ +|+|.++|.++... ..++.++||+|++.+++++|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999998776 99999999876431 12467999999999999999
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccc
Q 001507 97 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 176 (1065)
Q Consensus 97 v~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 176 (1065)
|+||+.|+.... ....++++++.+||.+..+..+ .
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998753100 0123778899999987766554 4
Q ss_pred cCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCc
Q 001507 177 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 256 (1065)
Q Consensus 177 ~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~ 256 (1065)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+.+++..++|++++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 69999999999999999999999999999999999999999999998764 35677779999999999999999999999
Q ss_pred EEEEcCcchHH
Q 001507 257 IVYQGPRVSVL 267 (1065)
Q Consensus 257 i~~~G~~~~~~ 267 (1065)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999998874
No 306
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=4.2e-36 Score=312.52 Aligned_cols=171 Identities=54% Similarity=0.916 Sum_probs=152.0
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCC--CCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCH
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK--TGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~--~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
+.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|+++.....++.++|++|++.+++.+|+
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t~ 99 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLTV 99 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCEeCchHhhhheEEEccCcccCCCCCcH
Confidence 56999999999999999999999999999999999987 6 5789999999987544456779999999988899999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+||+.+....+ .||||||||++|||||+.+|++++|||||+||
T Consensus 100 ~~~i~~~~~~~-------------------------------------~LS~G~~qrv~laral~~~p~illlDEP~~~L 142 (194)
T cd03213 100 RETLMFAAKLR-------------------------------------GLSGGERKRVSIALELVSNPSLLFLDEPTSGL 142 (194)
T ss_pred HHHHHHHHHhc-------------------------------------cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCC
Confidence 99997642100 49999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 871 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
|+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|.+ |++++.|
T Consensus 143 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 143 DSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 999999999999999777999999999986457778999999984 7887654
No 307
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-36 Score=326.64 Aligned_cols=220 Identities=21% Similarity=0.262 Sum_probs=176.6
Q ss_pred eeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEEC
Q 001507 686 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYIS 762 (1065)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~---~~~~G~i~i~ 762 (1065)
..+.++|+++.+ +++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+.+|+|.++
T Consensus 19 ~~l~~~nl~~~~-------------~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (267)
T PRK14237 19 IALSTKDLHVYY-------------GKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYR 85 (267)
T ss_pred eEEEEeeEEEEE-------------CCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEEC
Confidence 356777776554 345799999999999999999999999999999999998642 1468999999
Q ss_pred CccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCC
Q 001507 763 GYPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGI 837 (1065)
Q Consensus 763 g~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 837 (1065)
|.++.. ...++.++|++|++.+++ .||+||+.+...... ........++++++++.+++.+..+.... ..+
T Consensus 86 g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 161 (267)
T PRK14237 86 GIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAG--VKDKKVLDEIVETSLKQAALWDQVKDDLH-KSA 161 (267)
T ss_pred CEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCchhhhhhc-CCc
Confidence 987632 134567999999988877 599999988643221 11233344567888999988532211111 224
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCc
Q 001507 838 NGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGG 917 (1065)
Q Consensus 838 ~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 917 (1065)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|. +|
T Consensus 162 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~-~G 238 (267)
T PRK14237 162 LTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFY-LG 238 (267)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEE-CC
Confidence 6899999999999999999999999999999999999999999999985 4799999999986 5778899999998 58
Q ss_pred EEEEeCCC
Q 001507 918 ELIYAGPL 925 (1065)
Q Consensus 918 ~~~~~g~~ 925 (1065)
++++.|+.
T Consensus 239 ~i~~~g~~ 246 (267)
T PRK14237 239 DLIEYDKT 246 (267)
T ss_pred EEEEeCCH
Confidence 99999875
No 308
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-36 Score=328.49 Aligned_cols=218 Identities=22% Similarity=0.271 Sum_probs=172.6
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~---~~~~G~i~i~g 763 (1065)
.+.++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~-------------~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISY-------------GTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEE-------------CCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 46677776554 335799999999999999999999999999999999998542 13689999999
Q ss_pred ccCC-----cccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCC
Q 001507 764 YPKR-----QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 838 (1065)
Q Consensus 764 ~~~~-----~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 838 (1065)
.++. ...+++.++|++|++.+++ .||+||+.+.+..+. .. ....+.++++++.+++........ ...+.
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 153 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKL-NESGY 153 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhh-CCCcc
Confidence 8753 1234567999999998887 499999988754331 11 123345677888887742111111 11235
Q ss_pred CCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEec---
Q 001507 839 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR--- 915 (1065)
Q Consensus 839 ~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~--- 915 (1065)
.||||||||++|||||+.+|++|||||||+|||+.++..+.++|+++++ ++|||++||+++ ++...||++++|.+
T Consensus 154 ~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~~~~ 231 (269)
T PRK14259 154 SLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFNAEEV 231 (269)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999854 799999999986 57788999999985
Q ss_pred -------CcEEEEeCCC
Q 001507 916 -------GGELIYAGPL 925 (1065)
Q Consensus 916 -------gg~~~~~g~~ 925 (1065)
.|++++.|++
T Consensus 232 ~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 232 EGGSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccccceEEEeCCH
Confidence 2678888875
No 309
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-36 Score=337.87 Aligned_cols=210 Identities=16% Similarity=0.210 Sum_probs=168.6
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--CeeEEEEEECCccCCc---cc----ccceEEEEcCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQ---ET----FARISGYCEQND 782 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~--~~~~G~i~i~g~~~~~---~~----~~~~~~~v~q~~ 782 (1065)
...+|+||||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|.++.. .. +++.++||+|++
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~ 98 (330)
T PRK15093 19 WVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEP 98 (330)
T ss_pred CEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCc
Confidence 45799999999999999999999999999999999998642 2468999999987632 11 234699999997
Q ss_pred C--CCCCCCHHHHHHHHhhccCCCC---CCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhC
Q 001507 783 I--HSPGLTVLESLLFSAWLRLPSE---IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 857 (1065)
Q Consensus 783 ~--~~~~ltv~e~l~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~ 857 (1065)
. +.+.+||.+++.+......... ....+..+++.++++.++|.+..+... ..+..|||||||||+|||||+.+
T Consensus 99 ~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~--~~p~~LSgG~~QRv~iArAL~~~ 176 (330)
T PRK15093 99 QSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR--SFPYELTEGECQKVMIAIALANQ 176 (330)
T ss_pred chhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh--CCchhCCHHHHHHHHHHHHHHCC
Confidence 5 5788999999976422110000 111233456889999999975322111 12358999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 858 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 858 p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+||||||||+|||+.++..++++|+++.++ |.|||+||||++ .+.+.+|++++|. +|++++.|+.
T Consensus 177 P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~vm~-~G~ive~g~~ 243 (330)
T PRK15093 177 PRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKINVLY-CGQTVETAPS 243 (330)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999999999864 999999999986 5668899999998 5899999975
No 310
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=331.20 Aligned_cols=200 Identities=24% Similarity=0.319 Sum_probs=169.8
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeE---EEEEECCccCCc---ccccceEEEEcCCCC-CC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIE---GDIYISGYPKRQ---ETFARISGYCEQNDI-HS 785 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~---G~i~i~g~~~~~---~~~~~~~~~v~q~~~-~~ 785 (1065)
+.+|+|+||+|++||++||+||||||||||+++|+|..++ .+ |+|.++|.++.. ..+++.+||++|++. .+
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p--~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~ 97 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLP--DDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQF 97 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCC--CCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhh
Confidence 4699999999999999999999999999999999998763 34 999999988643 234567999999974 56
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
+..||+||+.|....+ ....++..++++++++.+++.+..+..+ +.||||||||++|||||+.+|++|+|||
T Consensus 98 ~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~G~~qrv~laral~~~P~llllDE 169 (282)
T PRK13640 98 VGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLSGGQKQRVAIAGILAVEPKIIILDE 169 (282)
T ss_pred ccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 7789999998764322 2234445567889999999987766554 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+|||+.++..+.+.|++++++ |+|||++||+++ .+ ..||++++|. +|++++.|++
T Consensus 170 Pt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~-~G~i~~~g~~ 227 (282)
T PRK13640 170 STSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLD-DGKLLAQGSP 227 (282)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999764 899999999986 34 5799999998 5899999875
No 311
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.2e-37 Score=306.28 Aligned_cols=216 Identities=22% Similarity=0.315 Sum_probs=189.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVS 86 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~ 86 (1065)
.+++.+++ ++.+++|+||.++||++.+++|||||||||.+++|.|++.|+ +|+|.++|.+++.. .+.+|||.|
T Consensus 6 e~vtK~Fg---~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~-~~~rIGyLP 78 (300)
T COG4152 6 EGVTKSFG---DKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQE-IKNRIGYLP 78 (300)
T ss_pred ecchhccC---ceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhh-hhhhcccCh
Confidence 34444443 457999999999999999999999999999999999999886 99999999887643 345699999
Q ss_pred cccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccc
Q 001507 87 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 166 (1065)
Q Consensus 87 Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 166 (1065)
.+..+++.+||.|.|.|.+++++... ++....++..|+.+++....
T Consensus 79 EERGLy~k~tv~dql~yla~LkGm~~----------------------------------~e~~~~~~~wLer~~i~~~~ 124 (300)
T COG4152 79 EERGLYPKMTVEDQLKYLAELKGMPK----------------------------------AEIQKKLQAWLERLEIVGKK 124 (300)
T ss_pred hhhccCccCcHHHHHHHHHHhcCCcH----------------------------------HHHHHHHHHHHHhccccccc
Confidence 99999999999999999999887532 12234478899999998876
Q ss_pred cccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhc
Q 001507 167 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 246 (1065)
Q Consensus 167 ~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~ 246 (1065)
... ++.||-|.+|++.+..+++.+|++++||||+|||||.+.+.+-+.+.++.. .|+||+..+|.++.+.++|
T Consensus 125 ~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLC 197 (300)
T COG4152 125 TKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELC 197 (300)
T ss_pred cch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHh
Confidence 554 457999999999999999999999999999999999999999999999865 4788888999999999999
Q ss_pred ccEEEecCCcEEEEcCcchHHHHH
Q 001507 247 DDVILLSEGQIVYQGPRVSVLDFF 270 (1065)
Q Consensus 247 D~v~~l~~G~i~~~G~~~~~~~~f 270 (1065)
|++++|++|+.|.+|+..+++..|
T Consensus 198 D~llmL~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 198 DRLLMLKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred hhhheecCCceEEeccHHHHHHhc
Confidence 999999999999999999998754
No 312
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.9e-35 Score=374.21 Aligned_cols=135 Identities=21% Similarity=0.316 Sum_probs=106.7
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccCcccCCCCCCCCHHHHHHHHHHHHHH---hCCC
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELV---ANPS 859 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGqrqr~~ia~~l~---~~p~ 859 (1065)
.+...||.|+|.++..-.........+..+++ ++++.++|.+. .+... ..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45578999999876542111111123344455 47888898765 45443 579999999999999998 6999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe-----cCcEEEEeCCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPLG 926 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gg~~~~~g~~~ 926 (1065)
+|||||||+|||+.+...+++.|++++++|.|||+++|+++ .+ ..+|++++|. ++|+++..|++.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999986 34 8899999995 368999999763
No 313
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=318.62 Aligned_cols=194 Identities=45% Similarity=0.746 Sum_probs=161.3
Q ss_pred HHHhhhhcCCc-cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--CCCceE
Q 001507 6 LRQLRIYRGNR-SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~-~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--~~~~~~ 82 (1065)
++++++.++.. .++.+|+|+||++++||+++|+||||||||||+++|+|.+.+..+.+|+|.++|.++... ..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i 85 (202)
T cd03233 6 WRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEI 85 (202)
T ss_pred EEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceE
Confidence 34566555442 456799999999999999999999999999999999999874224599999999887543 234679
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+|++|++.+++.+||+||+.++....
T Consensus 86 ~~~~q~~~~~~~~tv~~~l~~~~~~~------------------------------------------------------ 111 (202)
T cd03233 86 IYVSEEDVHFPTLTVRETLDFALRCK------------------------------------------------------ 111 (202)
T ss_pred EEEecccccCCCCcHHHHHhhhhhhc------------------------------------------------------
Confidence 99999999899999999998742210
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
. ++.+..||||||||++|||||+.+|++++|||||+|||+.++..+++.++++.+..+.++|+++||+.+++
T Consensus 112 ---~-----~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~ 183 (202)
T cd03233 112 ---G-----NEFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEI 183 (202)
T ss_pred ---c-----ccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHH
Confidence 1 12234699999999999999999999999999999999999999999999987643456677777888899
Q ss_pred HhhcccEEEecCCcEEEEc
Q 001507 243 YELFDDVILLSEGQIVYQG 261 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G 261 (1065)
.+++|++++|++|++++.|
T Consensus 184 ~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 184 YDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred HHhCCeEEEEECCEEEecC
Confidence 9999999999999998765
No 314
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=334.62 Aligned_cols=200 Identities=21% Similarity=0.300 Sum_probs=166.2
Q ss_pred eEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--------ccccceEEEEcCCCCC-
Q 001507 714 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--------ETFARISGYCEQNDIH- 784 (1065)
Q Consensus 714 ~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--------~~~~~~~~~v~q~~~~- 784 (1065)
.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++..
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~ 102 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQ 102 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEccccccccccHHHHhccEEEEEeCcchh
Confidence 59999999999999999999999999999999999876 568999999987531 2345679999999742
Q ss_pred CCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 785 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 785 ~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+...|++||+.|..... ........+.++++++.+++. +..+... ..||||||||++|||||+.+|++|||
T Consensus 103 ~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~lLlL 174 (289)
T PRK13645 103 LFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSP-----FELSGGQKRRVALAGIIAMDGNTLVL 174 (289)
T ss_pred hhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 23469999998864322 122333445678889999984 4555433 57999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 175 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 235 (289)
T PRK13645 175 DEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMH-EGKVISIGSP 235 (289)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999998754 899999999986 5778899999998 5799988874
No 315
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-36 Score=328.22 Aligned_cols=201 Identities=25% Similarity=0.340 Sum_probs=170.0
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC-CCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 788 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 788 (1065)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++. +++..
T Consensus 22 ~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 22 SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 358999999999999999999999999999999999876 568999999987643 234567999999974 67778
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
|+.+|+.|..... ....+...+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|||||||+
T Consensus 100 ~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~lllLDEPt~ 171 (269)
T PRK13648 100 IVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSGGQKQRVAIAGVLALNPSVIILDEATS 171 (269)
T ss_pred cHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998864322 1223344456788999999987666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|||+.++..+.+.|++++++ |+|||++||+++ ++. .+|++++|. +|++++.|+..
T Consensus 172 ~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~-~G~i~~~g~~~ 227 (269)
T PRK13648 172 MLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMN-KGTVYKEGTPT 227 (269)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEE-CCEEEEecCHH
Confidence 99999999999999998764 899999999987 454 499999998 58999998753
No 316
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.3e-36 Score=326.37 Aligned_cols=214 Identities=26% Similarity=0.324 Sum_probs=168.5
Q ss_pred HHhhhhcCCc-cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CC
Q 001507 7 RQLRIYRGNR-SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PP 79 (1065)
Q Consensus 7 ~~~~~~~~~~-~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~ 79 (1065)
+++++.+++. ....+|+|+|+++++||+++|+|||||||||||++|+|.++|. +|+|.++|.++.... .+
T Consensus 5 ~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 5 KNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred EeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhh
Confidence 3455554322 1136999999999999999999999999999999999998775 999999998875432 24
Q ss_pred ceEEEEcccc--ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHH
Q 001507 80 RTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIM 157 (1065)
Q Consensus 80 ~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l 157 (1065)
+.++|++|++ .+++.+||+||+.+.......... + ...+..+++++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~-~-------------------------------~~~~~~~~~~l 129 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSK-K-------------------------------EARKEAVLLLL 129 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcH-H-------------------------------HHHHHHHHHHH
Confidence 5799999998 456789999999876432211000 0 00011135678
Q ss_pred HHhCCc-ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEec
Q 001507 158 KILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLL 236 (1065)
Q Consensus 158 ~~lgL~-~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~ 236 (1065)
+.++|. +..+.. +..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+.+|++++
T Consensus 130 ~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~s 203 (228)
T cd03257 130 VGVGLPEEVLNRY-----PHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEE-LGLTLLFIT 203 (228)
T ss_pred HHCCCChhHhhCC-----chhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEe
Confidence 888985 444544 3469999999999999999999999999999999999999999999998753 256777799
Q ss_pred CCchHHHhhcccEEEecCCcEEEEc
Q 001507 237 QPAPEAYELFDDVILLSEGQIVYQG 261 (1065)
Q Consensus 237 ~~~~~~~~~~D~v~~l~~G~i~~~G 261 (1065)
|+.+++..+||++++|++|+++..|
T Consensus 204 H~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 204 HDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred CCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999999999999998765
No 317
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9.4e-37 Score=327.61 Aligned_cols=211 Identities=26% Similarity=0.333 Sum_probs=172.2
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~~ 82 (1065)
+++++.++ +.++|+|+||++++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.+
T Consensus 4 ~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 4 SNLNVYYG---QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred EeEEEEeC---CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCe
Confidence 34555443 246999999999999999999999999999999999999875 999999998765432 13569
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC-
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG- 161 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg- 161 (1065)
+|++|++.+++.+|++||+.++....... ....++++++.++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~ 120 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPV 120 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHh
Confidence 99999999899899999998764321100 0012455666665
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
+.+..++. ++.||||||||++|||||+.+|++++|||||+|||+.++.++.+.|+++++. ++++|++++|+.++
T Consensus 121 l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~ 194 (230)
T TIGR03410 121 LKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDF 194 (230)
T ss_pred HHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHH
Confidence 45444444 4569999999999999999999999999999999999999999999998653 35677779999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+..+||++++|++|++++.|+.+++
T Consensus 195 ~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 195 ARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999988765
No 318
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=328.51 Aligned_cols=204 Identities=22% Similarity=0.278 Sum_probs=170.8
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVS 86 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~ 86 (1065)
+++++.++ ++.+|+|+||++++|++++|+||||||||||+++|+|.+.|+ +|+|.++|.++.. .++.++|++
T Consensus 16 ~~l~~~~~---~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~ 87 (257)
T PRK11247 16 NAVSKRYG---ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMF 87 (257)
T ss_pred EEEEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEe
Confidence 44444443 246999999999999999999999999999999999998775 9999999976532 345799999
Q ss_pred cccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccc
Q 001507 87 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 166 (1065)
Q Consensus 87 Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 166 (1065)
|++.+++.+||+||+.++.. .. ....++++++.+||.+..
T Consensus 88 q~~~l~~~~tv~enl~~~~~-----~~-----------------------------------~~~~~~~~l~~~gl~~~~ 127 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLK-----GQ-----------------------------------WRDAALQALAAVGLADRA 127 (257)
T ss_pred cCccCCCCCcHHHHHHhccc-----ch-----------------------------------HHHHHHHHHHHcCChhHh
Confidence 99988888999999987421 00 011267788999998766
Q ss_pred cccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhc
Q 001507 167 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 246 (1065)
Q Consensus 167 ~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~ 246 (1065)
+..+ ..|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++.+. .+.+|++++|+.+++..+|
T Consensus 128 ~~~~-----~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tviivsHd~~~~~~~~ 201 (257)
T PRK11247 128 NEWP-----AALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQ-HGFTVLLVTHDVSEAVAMA 201 (257)
T ss_pred cCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhC
Confidence 5544 469999999999999999999999999999999999999999999988654 3566777999999999999
Q ss_pred ccEEEecCCcEEEEcCcc
Q 001507 247 DDVILLSEGQIVYQGPRV 264 (1065)
Q Consensus 247 D~v~~l~~G~i~~~G~~~ 264 (1065)
|+|++|++|++++.|+.+
T Consensus 202 d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 202 DRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEEECCEEEeecccc
Confidence 999999999999988754
No 319
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-36 Score=332.23 Aligned_cols=200 Identities=24% Similarity=0.318 Sum_probs=169.8
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCCC-CCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDI-HSPG 787 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~~-~~~~ 787 (1065)
+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .+..
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVA 100 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeccccccHHHHhhheEEEecChhhhhcc
Confidence 569999999999999999999999999999999999877 568999999987643 234677999999974 2335
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
.||.|++.|..... .....+..++++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|||||||
T Consensus 101 ~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 172 (280)
T PRK13633 101 TIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLSGGQKQRVAIAGILAMRPECIIFDEPT 172 (280)
T ss_pred ccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 69999999875432 1233444567889999999988777654 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 868 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|||+.++..+.+.|++++++ |+|||++||+++ ++. .+|++++|+ +|++++.|++
T Consensus 173 ~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~-~G~i~~~g~~ 228 (280)
T PRK13633 173 AMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMD-SGKVVMEGTP 228 (280)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999764 999999999987 344 499999998 4899999875
No 320
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-36 Score=325.86 Aligned_cols=208 Identities=21% Similarity=0.299 Sum_probs=168.7
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--CC-eeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--GG-IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~--~~-~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+|++|++||++||+||||||||||+++|+|..+ +. +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (252)
T PRK14256 16 KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPN 95 (252)
T ss_pred CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCC
Confidence 4579999999999999999999999999999999999864 21 258999999987632 234667999999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++.+|++||+.+...... ........++++++++.+++......... ..+..||||||||++|||+|+.+|++|+|
T Consensus 96 ~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrl~laral~~~p~llll 172 (252)
T PRK14256 96 PFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAMELSGGQQQRLCIARTIAVKPEVILM 172 (252)
T ss_pred CCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999987543221 11223334567888999988542111111 12467999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|. +|+++..|+.
T Consensus 173 DEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 231 (252)
T PRK14256 173 DEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY-MGDLVECGET 231 (252)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999975 689999999986 5678899999998 5899998875
No 321
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.3e-36 Score=329.73 Aligned_cols=202 Identities=21% Similarity=0.307 Sum_probs=168.8
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC--CCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI--HSPG 787 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~--~~~~ 787 (1065)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++. +++.
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 103 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPR 103 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCchhhHhccEEEEecCchhhcCcc
Confidence 469999999999999999999999999999999999877 568999999987642 123456999999875 5678
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
+|+.|++.+....+. ........+.++++++.+++. +..+.. +..||||||||++|||+|+.+|+|||||||
T Consensus 104 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLDEP 176 (267)
T PRK15112 104 QRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLAPGQKQRLGLARALILRPKVIIADEA 176 (267)
T ss_pred hhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcCHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 899999987654331 122333445678899999994 444443 257999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||+.++..+.+.|++++++ |.|||++||+++ ++...||++++|. +|+++..|+.
T Consensus 177 t~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 234 (267)
T PRK15112 177 LASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMH-QGEVVERGST 234 (267)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEecCCH
Confidence 9999999999999999999764 899999999986 5667899999998 5899988864
No 322
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.1e-36 Score=322.66 Aligned_cols=205 Identities=30% Similarity=0.425 Sum_probs=165.5
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.+++. .+.+|+|+||++++|++++|+||||||||||+++|+|.+.|+ +|+|.++|.++.... .++.++
T Consensus 3 ~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~ 78 (211)
T cd03225 3 KNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVG 78 (211)
T ss_pred eeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhce
Confidence 3455544321 246999999999999999999999999999999999998775 999999998765332 235689
Q ss_pred EEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 84 YVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 84 yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|++|++. .++.+||+||+.++....+.. . ......++++++.+||
T Consensus 79 ~~~q~~~~~~~~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l 124 (211)
T cd03225 79 LVFQNPDDQFFGPTVEEEVAFGLENLGLP--E--------------------------------EEIEERVEEALELVGL 124 (211)
T ss_pred EEecChhhhcCCCcHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCc
Confidence 9999974 366789999998754321100 0 0011236778899999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
.+..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. +++|++++|+.+++
T Consensus 125 ~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tvi~~sH~~~~~ 197 (211)
T cd03225 125 EGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE--GKTIIIVTHDLDLL 197 (211)
T ss_pred HhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHH
Confidence 87666544 469999999999999999999999999999999999999999999998753 56777899999999
Q ss_pred HhhcccEEEecCCc
Q 001507 243 YELFDDVILLSEGQ 256 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~ 256 (1065)
..+||++++|++|+
T Consensus 198 ~~~~d~i~~l~~G~ 211 (211)
T cd03225 198 LELADRVIVLEDGK 211 (211)
T ss_pred HHhCCEEEEEeCCC
Confidence 99999999999985
No 323
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.6e-36 Score=332.01 Aligned_cols=208 Identities=23% Similarity=0.305 Sum_probs=171.8
Q ss_pred ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCceEEEEcccc--
Q 001507 18 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD-- 89 (1065)
Q Consensus 18 ~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~~~~yv~Q~~-- 89 (1065)
++.+|+|+||++++||+++|+|||||||||||++|+|.+.|. +|+|.++|.++.... .++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 357999999999999999999999999999999999998775 999999998775432 235699999996
Q ss_pred ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc-ccccc
Q 001507 90 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADT 168 (1065)
Q Consensus 90 ~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t 168 (1065)
.+++.+||+||+.+....... .. .......++++++.+||. +..+.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~~---~~------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLTS---LD------------------------------ESEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---CC------------------------------HHHHHHHHHHHHHHcCCChhhhhC
Confidence 456789999999775321100 00 001123477889999996 45554
Q ss_pred cccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhccc
Q 001507 169 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 248 (1065)
Q Consensus 169 ~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~ 248 (1065)
. +..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+.+..++|+
T Consensus 147 ~-----~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 L-----PRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhcE
Confidence 4 4569999999999999999999999999999999999999999999998753 356778899999999999999
Q ss_pred EEEecCCcEEEEcCcchHH
Q 001507 249 VILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 249 v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++|++|++++.|+++++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999987764
No 324
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-37 Score=336.64 Aligned_cols=217 Identities=25% Similarity=0.333 Sum_probs=177.1
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-----CCCc
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPR 80 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-----~~~~ 80 (1065)
++++++.++. +..+|+|+||+|++||+++|+||||||||||+++|+|.++|. +|+|.++|.++... ..++
T Consensus 8 ~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 8 VEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred EEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHh
Confidence 4556665532 246999999999999999999999999999999999998775 99999999886311 1235
Q ss_pred eEEEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 81 TSAYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 81 ~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
.++|++|++. .+...||+||+.++....+.. . ......++++++.
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~--------------------~--------------~~~~~~~~~~l~~ 128 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLP--------------------E--------------DEVRKRVDNALKR 128 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCC--------------------H--------------HHHHHHHHHHHHH
Confidence 7999999973 344579999998854321100 0 0011247888999
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+||.+..++.+ +.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+.
T Consensus 129 ~gL~~~~~~~~-----~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~ 202 (283)
T PRK13636 129 TGIEHLKDKPT-----HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDI 202 (283)
T ss_pred CCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCH
Confidence 99987766554 569999999999999999999999999999999999999999999998763 356777799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++..+||++++|++|++++.|+++++.
T Consensus 203 ~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 203 DIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999988765
No 325
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.5e-37 Score=375.11 Aligned_cols=207 Identities=25% Similarity=0.371 Sum_probs=165.9
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEEEEccccccCCCC
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 95 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~yv~Q~~~~~~~l 95 (1065)
.++|+|+|++++||+.++|+||||||||||+++|+|.+ |. +|+|.+||.++.+.. .++.++||+|++++|..
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~- 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPHG- 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCCc-
Confidence 46999999999999999999999999999999999999 75 899999999887653 35789999999998875
Q ss_pred CHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCccc
Q 001507 96 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 175 (1065)
Q Consensus 96 Tv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 175 (1065)
||+|||.++.. ....+.+.++++. + ..++.++ .|++..||.||+++
T Consensus 438 TI~eNI~~g~~----~~~~eei~~al~~------------------a---------~l~~~i~--~lp~G~dT~vge~G- 483 (588)
T PRK11174 438 TLRDNVLLGNP----DASDEQLQQALEN------------------A---------WVSEFLP--LLPQGLDTPIGDQA- 483 (588)
T ss_pred CHHHHhhcCCC----CCCHHHHHHHHHH------------------h---------CHHHHHH--hcccccccccccCC-
Confidence 99999988521 0000111111110 0 0122222 35677899999875
Q ss_pred ccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCC
Q 001507 176 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 255 (1065)
Q Consensus 176 ~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G 255 (1065)
.+||||||||++||||++++|+||+||||||+||++++..+.+.|+++.+ ++|+++++|..+.+ ..||+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~---~~TvIiItHrl~~i-~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR---RQTTLMVTHQLEDL-AQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC---CCEEEEEecChHHH-HhCCEEEEEeCC
Confidence 47999999999999999999999999999999999999999999988742 35555677777554 569999999999
Q ss_pred cEEEEcCcchHHH
Q 001507 256 QIVYQGPRVSVLD 268 (1065)
Q Consensus 256 ~i~~~G~~~~~~~ 268 (1065)
++++.|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999998864
No 326
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=328.33 Aligned_cols=212 Identities=26% Similarity=0.386 Sum_probs=172.0
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~~ 82 (1065)
+++++.++ .+.+|+|+||++++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.+
T Consensus 9 ~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 9 DKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCE
Confidence 44555443 246999999999999999999999999999999999998775 999999998875432 23569
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh-C
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-G 161 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l-g 161 (1065)
+|++|++.+++.+||+||+.++..... .+ ..+..++++++.+ +
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~----~~--------------------------------~~~~~~~~~l~~~~~ 126 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAE----RD--------------------------------QFQERIKWVYELFPR 126 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccC----hh--------------------------------HHHHHHHHHHHHHHH
Confidence 999999988998999999987532110 00 0011245566666 4
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
+.+..++. +..||||||||++||||++.+|+|++|||||+|||+.++..+.+.|+++++. +++|++++|+.++
T Consensus 127 l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~ 199 (237)
T PRK11614 127 LHERRIQR-----AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQ--GMTIFLVEQNANQ 199 (237)
T ss_pred HHHHHhCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCcHHH
Confidence 65544443 3569999999999999999999999999999999999999999999988642 5667778999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+.++||++++|++|++++.|+++++.
T Consensus 200 ~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 200 ALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred HHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 99999999999999999999987763
No 327
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=4.3e-36 Score=321.90 Aligned_cols=201 Identities=25% Similarity=0.324 Sum_probs=165.9
Q ss_pred EeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC--eeEEEEEECCccCCcccc-cceEEEEcCCCC--CCCCCC
Q 001507 715 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG--IIEGDIYISGYPKRQETF-ARISGYCEQNDI--HSPGLT 789 (1065)
Q Consensus 715 il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~~~v~q~~~--~~~~lt 789 (1065)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999987620 168999999987644322 357999999974 556789
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc---cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS---LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
+.|++.+....... ......++++++++.+++.+ ..+.. +..|||||||||+|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999775432211 12334456889999999973 33433 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|. +|+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMD-DGRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999764 899999999986 5777899999998 5899988864
No 328
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-36 Score=315.80 Aligned_cols=210 Identities=22% Similarity=0.334 Sum_probs=172.7
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC-C--CeeEEEEEECCccCC---cc----cccceEEEEcCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT-G--GIIEGDIYISGYPKR---QE----TFARISGYCEQN 781 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~-~--~~~~G~i~i~g~~~~---~~----~~~~~~~~v~q~ 781 (1065)
...+++||||++++||++||+|.|||||||+.++|.|..+ + ...+|+|.++|.++. .+ -+.+.++|++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999875 2 346799999998652 22 134579999999
Q ss_pred C--CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 782 D--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 782 ~--~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
+ .+.|.+||.+.+.-......... ..++..+++.++++.+++.+-....... +.+|||||||||.||.||+.+|+
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y--PhelSGGMrQRV~IAmala~~P~ 173 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKSY--PHELSGGMRQRVMIAMALALNPK 173 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhhC--CcccCCcHHHHHHHHHHHhCCCC
Confidence 6 46788999988765544322110 2445566788889999987643322222 36899999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
+||.||||++||...+.+|+++|+++.+ .|.|+|+||||+. -+.+.||||+||. .|++++.|+..
T Consensus 174 LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY-aG~iVE~g~~~ 239 (316)
T COG0444 174 LLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY-AGRIVEEGPVE 239 (316)
T ss_pred EEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE-CcEEEEeCCHH
Confidence 9999999999999999999999999986 5999999999997 4889999999998 58999999863
No 329
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=329.99 Aligned_cols=223 Identities=24% Similarity=0.319 Sum_probs=176.1
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCCC---CCCc
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF---VPPR 80 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~~---~~~~ 80 (1065)
++++++.+++ ..+|+|+||++++||+++|+||||||||||+++|+|.+.+. .+.+|+|.++|.++... ..++
T Consensus 6 ~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 82 (250)
T PRK14247 6 IRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRR 82 (250)
T ss_pred EEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhc
Confidence 4556655532 46999999999999999999999999999999999998642 13599999999877542 2245
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+||+||+.++......... . .+..+.++++++.+
T Consensus 83 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~------------------~--------------~~~~~~~~~~l~~~ 130 (250)
T PRK14247 83 RVQMVFQIPNPIPNLSIFENVALGLKLNRLVKS------------------K--------------KELQERVRWALEKA 130 (250)
T ss_pred cEEEEeccCccCCCCcHHHHHHHHHHhccccCC------------------H--------------HHHHHHHHHHHHHc
Confidence 799999999888899999999886432110000 0 00122367788899
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+...... +..+.+|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++++++++|+.+
T Consensus 131 ~l~~~~~~~~-~~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~ 206 (250)
T PRK14247 131 QLWDEVKDRL-DAPAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK---DMTIVLVTHFPQ 206 (250)
T ss_pred CCCcchhhhh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHH
Confidence 9864211111 233457999999999999999999999999999999999999999999998742 467778999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++.++||++++|++|++++.|+++++.
T Consensus 207 ~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 207 QAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999887763
No 330
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-37 Score=336.54 Aligned_cols=217 Identities=24% Similarity=0.336 Sum_probs=177.2
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++. ...+|+|+||++++||+++|+|+||||||||+++|+|.+.|+ +|+|.++|.++.... .++.+
T Consensus 6 ~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 6 TRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred EEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhhe
Confidence 4456665532 235999999999999999999999999999999999998875 999999998765422 23568
Q ss_pred EEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 83 AYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 83 ~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
+||+|++. .+...||+||+.+.....+.. .......++++++.+|
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~ 126 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLD----------------------------------EETVAHRVSSALHMLG 126 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHCC
Confidence 99999973 344679999998754321100 0001224778899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..++.+ +.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .++||++++|+.++
T Consensus 127 l~~~~~~~~-----~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~ 200 (277)
T PRK13652 127 LEELRDRVP-----HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDL 200 (277)
T ss_pred ChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHH
Confidence 987776655 469999999999999999999999999999999999999999999998753 35677889999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+.+.||++++|++|++++.|+++++.
T Consensus 201 ~~~~~drv~~l~~G~i~~~g~~~~~~ 226 (277)
T PRK13652 201 VPEMADYIYVMDKGRIVAYGTVEEIF 226 (277)
T ss_pred HHHhCCEEEEEECCeEEEECCHHHHh
Confidence 99999999999999999999988774
No 331
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.4e-36 Score=322.29 Aligned_cols=202 Identities=26% Similarity=0.309 Sum_probs=167.0
Q ss_pred ccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEccccccCCCCCHHHHH
Q 001507 22 LDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETL 101 (1065)
Q Consensus 22 L~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~e~l 101 (1065)
|+|+||++++|++++|+||||||||||+++|+|.+.|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 58999999999999999999999999999999998775 9999999988754322 348999999989989999999
Q ss_pred HHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccccCchh
Q 001507 102 DFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGG 181 (1065)
Q Consensus 102 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGG 181 (1065)
.++....... .+ .......++++++.+||++..++.+ ..||||
T Consensus 76 ~~~~~~~~~~--~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--LS------------------------------KSERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcccC--CC------------------------------HHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 8753210000 00 0001223678899999987766654 469999
Q ss_pred hhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEEEEc
Q 001507 182 QKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 261 (1065)
Q Consensus 182 qkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G 261 (1065)
||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ .+.+|++++|+.+++.++||++++|++|++++.|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEE-HRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999988654 3567777999999999999999999999999988
Q ss_pred CcchH
Q 001507 262 PRVSV 266 (1065)
Q Consensus 262 ~~~~~ 266 (1065)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65443
No 332
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=322.91 Aligned_cols=196 Identities=24% Similarity=0.313 Sum_probs=166.6
Q ss_pred eeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc-cccceEEEEcCCCCCCCCCCHHHHHHH
Q 001507 718 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLESLLF 796 (1065)
Q Consensus 718 ~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~~~v~q~~~~~~~ltv~e~l~~ 796 (1065)
|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 8999999999999999999999999999999876 5689999999876431 224579999999999999999999987
Q ss_pred HhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHH
Q 001507 797 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 876 (1065)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~ 876 (1065)
...... .. .+...++++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+|||+.++.
T Consensus 95 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~ 166 (232)
T PRK10771 95 GLNPGL--KL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQ 166 (232)
T ss_pred cccccc--CC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 532110 11 1233556889999999987776654 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 877 IVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 877 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
.+.+.|++++++ |+|||+++|+++ ++.+.+|++++|. +|++++.|+.
T Consensus 167 ~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~g~i~~~g~~ 214 (232)
T PRK10771 167 EMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVA-DGRIAWDGPT 214 (232)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999998754 899999999986 5677899999998 5899998875
No 333
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=331.30 Aligned_cols=215 Identities=22% Similarity=0.270 Sum_probs=175.7
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC---------
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--------- 76 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--------- 76 (1065)
++++++.++ ++.+|+|+||++++|++++|+|+||||||||+++|+|.++|+ +|+|.++|.++...
T Consensus 8 ~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~ 81 (257)
T PRK10619 8 VIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKV 81 (257)
T ss_pred EeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEccccccccccccc
Confidence 345555553 346999999999999999999999999999999999998765 89999999876421
Q ss_pred -------CCCceEEEEccccccCCCCCHHHHHHHHhh-ccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCc
Q 001507 77 -------VPPRTSAYVSQQDWQVAEMTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQK 148 (1065)
Q Consensus 77 -------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (1065)
..++.++|++|++.+++.+||+||+.++.. .... .. ..
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~---~~-------------------------------~~ 127 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGL---SK-------------------------------QE 127 (257)
T ss_pred ccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCC---CH-------------------------------HH
Confidence 123579999999998999999999987432 1100 00 00
Q ss_pred chhHHHHHHHHhCCcccc-cccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcC
Q 001507 149 TSLVVEYIMKILGLDTCA-DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRAL 227 (1065)
Q Consensus 149 ~~~~v~~~l~~lgL~~~~-~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~ 227 (1065)
.+..+.++++.+||.+.. +. .+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++
T Consensus 128 ~~~~~~~~l~~~gl~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-- 200 (257)
T PRK10619 128 ARERAVKYLAKVGIDERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-- 200 (257)
T ss_pred HHHHHHHHHHHcCCChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--
Confidence 123467889999997643 43 3457999999999999999999999999999999999999999999999864
Q ss_pred CCEEEEEecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 228 DGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 228 ~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+.+|++++|+.+++..+||+|++|++|++++.|+++++.
T Consensus 201 ~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 201 EGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred cCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 2567777999999999999999999999999999887653
No 334
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.1e-36 Score=326.86 Aligned_cols=216 Identities=23% Similarity=0.360 Sum_probs=174.6
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC--ceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~--~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++. ..+++|+||+|++||+++|+|+||||||||+++|+|.+.|.+ ..+|+|.++|.++... ..+
T Consensus 5 ~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 81 (247)
T TIGR00972 5 ENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELR 81 (247)
T ss_pred EEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHH
Confidence 345554432 359999999999999999999999999999999999987531 2389999999887532 124
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++ .||+||+.+....++... . ......++.+++.
T Consensus 82 ~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~~~~-~--------------------------------~~~~~~~~~~l~~ 127 (247)
T TIGR00972 82 RRVGMVFQKPNPFP-MSIYDNIAYGPRLHGIKD-K--------------------------------KELDEIVEESLKK 127 (247)
T ss_pred hheEEEecCcccCC-CCHHHHHHhHHHhcCCCC-H--------------------------------HHHHHHHHHHHHH
Confidence 57999999998888 999999988643321000 0 0011236788999
Q ss_pred hCCc----ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEe
Q 001507 160 LGLD----TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 235 (1065)
Q Consensus 160 lgL~----~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~ 235 (1065)
+||. +..++. ++.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+++
T Consensus 128 ~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiiv 199 (247)
T TIGR00972 128 AALWDEVKDRLHDS-----ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIV 199 (247)
T ss_pred cCCCcchhhHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEE
Confidence 9997 444443 456999999999999999999999999999999999999999999998864 3 677779
Q ss_pred cCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 236 LQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 236 ~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+|+.+++..++|++++|++|++++.|+++++.
T Consensus 200 sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 200 THNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred ecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999887663
No 335
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.1e-36 Score=322.94 Aligned_cols=209 Identities=27% Similarity=0.404 Sum_probs=165.9
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVS 86 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~ 86 (1065)
+++++.+++ ..+|+|+|+++++||+++|+||||||||||+++|+|.+.|+ +|+|.++|.++. ..++.++|++
T Consensus 3 ~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~ 74 (213)
T cd03235 3 EDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVP 74 (213)
T ss_pred ccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEec
Confidence 345555432 46999999999999999999999999999999999998775 999999997654 2345799999
Q ss_pred cccccC--CCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc
Q 001507 87 QQDWQV--AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT 164 (1065)
Q Consensus 87 Q~~~~~--~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~ 164 (1065)
|++.+. ..+||+||+.++...... .+.. .. ...+..++++++.+||++
T Consensus 75 q~~~~~~~~~~tv~e~l~~~~~~~~~--~~~~--------------~~--------------~~~~~~~~~~l~~~~l~~ 124 (213)
T cd03235 75 QRRSIDRDFPISVRDVVLMGLYGHKG--LFRR--------------LS--------------KADKAKVDEALERVGLSE 124 (213)
T ss_pred cccccccCCCCcHHHHHHhccccccc--cccC--------------CC--------------HHHHHHHHHHHHHcCCHH
Confidence 998653 347999999875321100 0000 00 001224778899999987
Q ss_pred cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHh
Q 001507 165 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 244 (1065)
Q Consensus 165 ~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~ 244 (1065)
..++.+ ..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ .++++++++|+.+++.+
T Consensus 125 ~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sH~~~~~~~ 197 (213)
T cd03235 125 LADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR--EGMTILVVTHDLGLVLE 197 (213)
T ss_pred HHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHH
Confidence 666554 46999999999999999999999999999999999999999999999865 35677779999999999
Q ss_pred hcccEEEecCCcEEEEc
Q 001507 245 LFDDVILLSEGQIVYQG 261 (1065)
Q Consensus 245 ~~D~v~~l~~G~i~~~G 261 (1065)
+||++++|++| +++.|
T Consensus 198 ~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 198 YFDRVLLLNRT-VVASG 213 (213)
T ss_pred hcCEEEEEcCc-EeecC
Confidence 99999999876 65554
No 336
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.5e-36 Score=330.48 Aligned_cols=215 Identities=23% Similarity=0.303 Sum_probs=176.7
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC----------
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF---------- 76 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~---------- 76 (1065)
+++++.+++ ..+|+|+||+|++||+++|+||||||||||+++|+|.+.|+ +|+|.++|.++...
T Consensus 4 ~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 4 SDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred EEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccccccccccccc
Confidence 345555532 46999999999999999999999999999999999998775 99999999876432
Q ss_pred ------CCCceEEEEccccccCCCCCHHHHHHHHhhc-cCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcc
Q 001507 77 ------VPPRTSAYVSQQDWQVAEMTVRETLDFAGQC-QGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKT 149 (1065)
Q Consensus 77 ------~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (1065)
..++.++|++|++.+++..||.||+.++... .+. . . ...
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~----~----------------~--------------~~~ 123 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGM----A----------------R--------------AEA 123 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCC----C----------------H--------------HHH
Confidence 1245799999999989999999999875321 000 0 0 001
Q ss_pred hhHHHHHHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCC
Q 001507 150 SLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDG 229 (1065)
Q Consensus 150 ~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~ 229 (1065)
...++++++.+||.+..+.. +..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+
T Consensus 124 ~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~ 197 (252)
T TIGR03005 124 EKRAMELLDMVGLADKADHM-----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HD 197 (252)
T ss_pred HHHHHHHHHHcCChhHhhcC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cC
Confidence 12367889999998766554 3569999999999999999999999999999999999999999999988653 35
Q ss_pred EEEEEecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 230 TTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 230 ~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++++++|+.+++..++|++++|++|++++.|+.+++.
T Consensus 198 ~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 198 LTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred cEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 77888999999999999999999999999999877653
No 337
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-36 Score=325.19 Aligned_cols=203 Identities=23% Similarity=0.271 Sum_probs=167.2
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++.. ...++.+||++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (251)
T PRK14270 16 EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPN 95 (251)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCC
Confidence 457999999999999999999999999999999999976421 258999999987632 133567999999998
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
+++ +|++||+.|....... .......++++++++.+++.+ ..+. ....||+|||||++|||+|+.+|+
T Consensus 96 ~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~ 167 (251)
T PRK14270 96 PFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKK-----SALKLSGGQQQRLCIARTIAVKPD 167 (251)
T ss_pred cCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhC-----CcccCCHHHHHHHHHHHHHhcCCC
Confidence 887 8999999886543211 122333456778899988742 2222 235899999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 168 llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 230 (251)
T PRK14270 168 VILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL-MGDLIEFNKT 230 (251)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE-CCeEEEeCCH
Confidence 9999999999999999999999999875 689999999986 5778899999998 5899998875
No 338
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=331.83 Aligned_cols=221 Identities=23% Similarity=0.282 Sum_probs=175.3
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~---~~~~G~i~i~g 763 (1065)
.+.++|+++.+.. +.+.+|+|+||+|++||++||+||||||||||+++|+|.... .+.+|+|.+||
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 4667777765521 234699999999999999999999999999999999997642 24589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCC
Q 001507 764 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 838 (1065)
Q Consensus 764 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 838 (1065)
.++.. ..+++.++||||++.++. .|++||+.|+..... ....+...+.++++++.+++.+..+..++. ...
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~--~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~~ 224 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNG--INDRKILEKIVEKSLKSAALWDEVKDDLDK-AGN 224 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcC--CChHHHHHHHHHHHHHHcCCcchhhhhhhC-Ccc
Confidence 98742 235678999999998875 799999998643221 111222234467788888875322222222 246
Q ss_pred CCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 839 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 839 ~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
.||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||+++ .+.+.+|++++|. +|+
T Consensus 225 ~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~-~G~ 301 (329)
T PRK14257 225 ALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFY-QGW 301 (329)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEE-CCE
Confidence 8999999999999999999999999999999999999999999999865 799999999986 4667799999998 589
Q ss_pred EEEeCCC
Q 001507 919 LIYAGPL 925 (1065)
Q Consensus 919 ~~~~g~~ 925 (1065)
++..|++
T Consensus 302 i~e~g~~ 308 (329)
T PRK14257 302 IEEAGET 308 (329)
T ss_pred EEEeCCH
Confidence 9999976
No 339
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.6e-36 Score=358.59 Aligned_cols=208 Identities=26% Similarity=0.367 Sum_probs=175.5
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|++.+++
T Consensus 15 ~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (501)
T PRK10762 15 PGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIP 92 (501)
T ss_pred CCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHhCCEEEEEcchhccC
Confidence 34679999999999999999999999999999999999876 4689999999876321 12456999999998999
Q ss_pred CCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 787 GLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
.+||+||+.|+...+.. ........+++++++++.+++.+..+..+ ..|||||||||+|||||+.+|++|||||
T Consensus 93 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDE 167 (501)
T PRK10762 93 QLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSIGEQQMVEIAKVLSFESKVIIMDE 167 (501)
T ss_pred CCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999999886432211 11122334456789999999987776654 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
||+|||+.++..+++.|++++++|.|||++|||++ ++...||++++|. +|+++..|+..+
T Consensus 168 Pt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~-~G~i~~~~~~~~ 227 (501)
T PRK10762 168 PTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFR-DGQFIAEREVAD 227 (501)
T ss_pred CcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEecCcCc
Confidence 99999999999999999999877999999999986 5778899999998 589999988754
No 340
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-36 Score=324.69 Aligned_cols=208 Identities=21% Similarity=0.298 Sum_probs=167.2
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--C-eeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|...+ . +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 17 ~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 96 (251)
T PRK14244 17 SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPN 96 (251)
T ss_pred CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcc
Confidence 45799999999999999999999999999999999998541 1 358999999987532 134567999999988
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++. |++||+.+....+.. .......++.++++++.+++.+....... ..+..||||||||++|||+|+.+|++|||
T Consensus 97 ~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~Gq~qrv~laral~~~p~llll 173 (251)
T PRK14244 97 PFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLK-DSAFELSGGQQQRLCIARAIAVKPTMLLM 173 (251)
T ss_pred cccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhh-cChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8875 999999886433211 11223334567888999998652111111 12357999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++. +|+|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 174 DEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 174 DEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999985 4899999999986 56778999999985 799988874
No 341
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=328.51 Aligned_cols=212 Identities=24% Similarity=0.341 Sum_probs=173.7
Q ss_pred HHHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC---CCCce
Q 001507 5 LLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF---VPPRT 81 (1065)
Q Consensus 5 ~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~---~~~~~ 81 (1065)
.++++++.+++ ..+|+|+||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.
T Consensus 5 ~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~ 78 (241)
T PRK14250 5 EFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRK 78 (241)
T ss_pred EEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhc
Confidence 34566655532 46999999999999999999999999999999999998775 99999999876432 22457
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
++|++|++.+++ .||+||+.++..... .....++++++.+|
T Consensus 79 i~~~~q~~~~~~-~tv~e~l~~~~~~~~--------------------------------------~~~~~~~~~l~~~~ 119 (241)
T PRK14250 79 IGMVFQQPHLFE-GTVKDNIEYGPMLKG--------------------------------------EKNVDVEYYLSIVG 119 (241)
T ss_pred EEEEecCchhch-hhHHHHHhcchhhcC--------------------------------------cHHHHHHHHHHHcC
Confidence 999999988776 699999976432110 00113667888999
Q ss_pred Cc-ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 162 LD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 162 L~-~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
|+ +..++. +..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+
T Consensus 120 l~~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tii~~sH~~~ 193 (241)
T PRK14250 120 LNKEYATRD-----VKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNK-MNLTVIWITHNME 193 (241)
T ss_pred CCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEeccHH
Confidence 96 344443 4569999999999999999999999999999999999999999999988653 2567777999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++.++||+|++|++|+++..|++.++.
T Consensus 194 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (241)
T PRK14250 194 QAKRIGDYTAFLNKGILVEYAKTYDFF 220 (241)
T ss_pred HHHHhCCEEEEEeCCEEEEeCCHHHHh
Confidence 999999999999999999999887653
No 342
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-37 Score=298.16 Aligned_cols=214 Identities=24% Similarity=0.365 Sum_probs=186.1
Q ss_pred ccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcC
Q 001507 704 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQ 780 (1065)
Q Consensus 704 ~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q 780 (1065)
++.++.++++.+|+++|..|++|.+++|+|||||||||||.+++++.+ ..+|+|+++|.++.. ..+.+.++..-|
T Consensus 5 ~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ 82 (252)
T COG4604 5 ENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQ 82 (252)
T ss_pred hhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHh
Confidence 445556788999999999999999999999999999999999999876 579999999998743 456777888999
Q ss_pred CCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCc
Q 001507 781 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 860 (1065)
Q Consensus 781 ~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~i 860 (1065)
+......+||+|-+.|+..-.. .....++.+..++++++.++|.++.|+.. .+||||||||.-||+.|+++.+.
T Consensus 83 ~N~i~~rlTV~dLv~FGRfPYS-qGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdy 156 (252)
T COG4604 83 ENHINSRLTVRDLVGFGRFPYS-QGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDY 156 (252)
T ss_pred hchhhheeEHHHHhhcCCCccc-CCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcE
Confidence 9888889999999999732211 22234566778999999999999999876 47999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 861 VFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 861 l~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
++||||.++||......+|+.|++++++ |+|||++.||.+. ...+.|.|+-|+ +|+++..|++.+
T Consensus 157 vlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK-~G~vv~~G~~~e 222 (252)
T COG4604 157 VLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALK-NGKVVKQGSPDE 222 (252)
T ss_pred EEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeec-CCEEEecCCHHH
Confidence 9999999999999999999999999876 9999999999885 456789999998 589999999853
No 343
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-36 Score=338.36 Aligned_cols=222 Identities=21% Similarity=0.290 Sum_probs=176.7
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.+.. ....+|+|+||+|++||+++|+|||||||||||++|+|...+. .+.+|+|.++|.++... ..+
T Consensus 84 ~nls~~y~~-~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr 162 (329)
T PRK14257 84 RNFNFWYMN-RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELR 162 (329)
T ss_pred EeeEEEecC-CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhh
Confidence 344444432 2246999999999999999999999999999999999987531 13489999999987532 235
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++||||+++++. .||+||+.|+....+... + +..++.++.+++.
T Consensus 163 ~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~ 208 (329)
T PRK14257 163 TRIGMVFQKPTPFE-MSIFDNVAYGPRNNGIND--R-------------------------------KILEKIVEKSLKS 208 (329)
T ss_pred ccEEEEecCCccCC-CcHHHHHHhHHHhcCCCh--H-------------------------------HHHHHHHHHHHHH
Confidence 67999999999775 799999998643211000 0 0001225667788
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
++|.+..++.+++ ...+|||||||||+||||++.+|+||+|||||+|||+.+...+.+.|+++.+ +.||++++|+.
T Consensus 209 ~~L~~~l~~~~~~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l 284 (329)
T PRK14257 209 AALWDEVKDDLDK-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSM 284 (329)
T ss_pred cCCcchhhhhhhC-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCH
Confidence 8876554555654 4568999999999999999999999999999999999999999999998753 36788899999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++.++||+|++|++|++++.|++.++.
T Consensus 285 ~~i~~~~Driivl~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 285 AQAQRISDETVFFYQGWIEEAGETKTIF 312 (329)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999998874
No 344
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=329.66 Aligned_cols=215 Identities=29% Similarity=0.470 Sum_probs=175.6
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.+++ ..+|+|+||++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++
T Consensus 6 ~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 6 RNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheE
Confidence 445555432 46999999999999999999999999999999999998775 999999998764322 235689
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD 163 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~ 163 (1065)
|++|++.+++.+||+||+.++...... .. +..+..++++++.+||.
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~--~~--------------------------------~~~~~~~~~~l~~~~l~ 125 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGL--SR--------------------------------AEDDALVAAALAQVDLA 125 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCC--Cc--------------------------------HHHHHHHHHHHHHcCCH
Confidence 999998877889999999875321100 00 00112367889999998
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHh------cCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecC
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLV------GPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQ 237 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~------~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~ 237 (1065)
+..++.+ ..|||||||||+|||||+ .+|++++|||||+|||+.++..+.+.|+++++. .+.+|++++|
T Consensus 126 ~~~~~~~-----~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH 199 (258)
T PRK13548 126 HLAGRDY-----PQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHE-RGLAVIVVLH 199 (258)
T ss_pred hHhcCCc-----ccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEEC
Confidence 7666655 469999999999999999 599999999999999999999999999998633 3567777999
Q ss_pred CchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 238 PAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 238 ~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+.+++..+||+|++|++|++++.|+++++.
T Consensus 200 ~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 200 DLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred CHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 999999999999999999999999876653
No 345
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.2e-36 Score=327.46 Aligned_cols=220 Identities=23% Similarity=0.330 Sum_probs=176.4
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~~ 82 (1065)
+++++.+++ +.+|+|+||++++|++++|+|||||||||||++|+|.+.|+ +|+|.++|.++.... .++.+
T Consensus 6 ~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 6 EGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCe
Confidence 445554432 46999999999999999999999999999999999998775 999999998765432 13469
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+|++|++.+++.+||+||+.++..... ..+..... . .....+..++++++.+||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~-----------~-------------~~~~~~~~~~~~l~~~~l 133 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDK--SVFASLFF-----------R-------------LSAEEKDRIEEVLETIGL 133 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhccc--cccccccc-----------c-------------cHHHHHHHHHHHHHHcCC
Confidence 999999999999999999988543110 00000000 0 000112347889999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++..++.+ +.|||||||||+||||++.+|++++|||||+|||+.++..+++.|+++++ +.+|++++|+.+++
T Consensus 134 ~~~~~~~~-----~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~---~~tii~~sH~~~~~ 205 (242)
T TIGR03411 134 ADEADRLA-----GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG---KHSVVVVEHDMEFV 205 (242)
T ss_pred chhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc---CCEEEEEECCHHHH
Confidence 87666554 46999999999999999999999999999999999999999999999854 35777799999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
.++||++++|++|++++.|+.+++
T Consensus 206 ~~~~d~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 206 RSIADKVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred HHhCCEEEEEECCeEEeeCCHHHH
Confidence 999999999999999999987665
No 346
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=333.80 Aligned_cols=218 Identities=22% Similarity=0.306 Sum_probs=177.3
Q ss_pred HHHhhhhcCCcc---ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC----CC
Q 001507 6 LRQLRIYRGNRS---KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~---~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~----~~ 78 (1065)
++++++.++... .+.+|+|+||+|++||+++|+|+||||||||+++|+|.+.++ +|+|.++|.++... ..
T Consensus 7 ~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 7 CKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred EeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHH
Confidence 456666654321 356999999999999999999999999999999999999875 99999999887542 12
Q ss_pred CceEEEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHH
Q 001507 79 PRTSAYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIM 157 (1065)
Q Consensus 79 ~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l 157 (1065)
++.++|++|++. .+...||.||+.|+....+... .+.+..+++++
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l 129 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESL 129 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHH
Confidence 467999999974 2334699999988643221100 00123478899
Q ss_pred HHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecC
Q 001507 158 KILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQ 237 (1065)
Q Consensus 158 ~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~ 237 (1065)
+.+||++..++.+ ..||||||||++|||||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|
T Consensus 130 ~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH 203 (280)
T PRK13633 130 KKVGMYEYRRHAP-----HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITH 203 (280)
T ss_pred HHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEec
Confidence 9999988777665 469999999999999999999999999999999999999999999998653 3567777899
Q ss_pred CchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 238 PAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 238 ~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+.+++.. ||++++|++|++++.|+++++.
T Consensus 204 ~~~~~~~-~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 204 YMEEAVE-ADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred ChHHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 9999876 9999999999999999988775
No 347
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-36 Score=325.83 Aligned_cols=218 Identities=22% Similarity=0.289 Sum_probs=173.1
Q ss_pred EEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--C-eeEEEEEECCc
Q 001507 688 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGY 764 (1065)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~--~-~~~G~i~i~g~ 764 (1065)
+.++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..++ . +.+|+|.++|.
T Consensus 13 l~i~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~ 79 (259)
T PRK14274 13 YQINGMNLWY-------------GQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGS 79 (259)
T ss_pred EEEeeEEEEE-------------CCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCE
Confidence 5666766543 345799999999999999999999999999999999997641 1 24899999998
Q ss_pred cCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCC
Q 001507 765 PKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGING 839 (1065)
Q Consensus 765 ~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 839 (1065)
++.. ..+++.+||++|++.+++. |++||+.|....+.. ....+..++++++++.+++.+...... .....+
T Consensus 80 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~l-~~~~~~ 155 (259)
T PRK14274 80 NILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHGT--KNKKKLQEIVEKSLKDVALWDEVKDRL-HTQALS 155 (259)
T ss_pred EccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhhhhh-hCCccc
Confidence 7632 2345679999999888875 999999886433211 122333456778888888853211111 112358
Q ss_pred CCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 001507 840 LSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 919 (1065)
Q Consensus 840 lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 919 (1065)
||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.+|++++|+ +|++
T Consensus 156 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~-~G~i 232 (259)
T PRK14274 156 LSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY-MGEL 232 (259)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE-CCEE
Confidence 999999999999999999999999999999999999999999999864 799999999986 5778899999998 5899
Q ss_pred EEeCCC
Q 001507 920 IYAGPL 925 (1065)
Q Consensus 920 ~~~g~~ 925 (1065)
+..|++
T Consensus 233 ~~~g~~ 238 (259)
T PRK14274 233 VECNDT 238 (259)
T ss_pred EEECCH
Confidence 999875
No 348
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=334.16 Aligned_cols=217 Identities=20% Similarity=0.275 Sum_probs=173.5
Q ss_pred HHHhhhhcCCcc--ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-------
Q 001507 6 LRQLRIYRGNRS--KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF------- 76 (1065)
Q Consensus 6 ~~~~~~~~~~~~--~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~------- 76 (1065)
++++++.+++.. ..++|+|+||+|++|++++|+||||||||||+++|+|.+.|+ +|+|.++|.++...
T Consensus 5 ~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 5 LQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred EEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHH
Confidence 345555554321 246999999999999999999999999999999999998775 99999999876532
Q ss_pred CCCceEEEEcccc--ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHH
Q 001507 77 VPPRTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVE 154 (1065)
Q Consensus 77 ~~~~~~~yv~Q~~--~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 154 (1065)
..++.++|++|++ .+++ .||+||+.|.....+.. . .+....++
T Consensus 82 ~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~~~~--~--------------------------------~~~~~~~~ 126 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNFGVS--Q--------------------------------EEAEALAR 126 (280)
T ss_pred HHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHH
Confidence 1235699999996 3444 69999998764321100 0 00112367
Q ss_pred HHHHHhCCcc-cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEE
Q 001507 155 YIMKILGLDT-CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVI 233 (1065)
Q Consensus 155 ~~l~~lgL~~-~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii 233 (1065)
++++.+||.. ..++. +..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++++ .+++|+
T Consensus 127 ~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii 199 (280)
T PRK13649 127 EKLALVGISESLFEKN-----PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ--SGMTIV 199 (280)
T ss_pred HHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--CCCEEE
Confidence 7888999963 44444 456999999999999999999999999999999999999999999998864 256777
Q ss_pred EecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 234 SLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 234 ~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++|+.+++..++|++++|++|++++.|+++++.
T Consensus 200 ivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 200 LVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 7999999999999999999999999999987763
No 349
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-36 Score=324.89 Aligned_cols=207 Identities=24% Similarity=0.302 Sum_probs=165.4
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||++++||++||+||||||||||+++|+|..+ + .+.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 17 ~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 96 (252)
T PRK14239 17 KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPN 96 (252)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCc
Confidence 4579999999999999999999999999999999999732 2 1247999999987632 234567999999988
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++ .|++||+.+....+. . .......+.++++++.+++.+...... ...+..||||||||++|||||+.+|++|||
T Consensus 97 ~~~-~tv~enl~~~~~~~~-~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llll 172 (252)
T PRK14239 97 PFP-MSIYENVVYGLRLKG-I-KDKQVLDEAVEKSLKGASIWDEVKDRL-HDSALGLSGGQQQRVCIARVLATSPKIILL 172 (252)
T ss_pred cCc-CcHHHHHHHHHHHcC-C-CcHHHHHHHHHHHHHHcCCchhHHHHH-hcCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 877 899999988643321 1 112233456778888888743111111 112357999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++...+|++++|. +|++++.|+.
T Consensus 173 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 231 (252)
T PRK14239 173 DEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL-DGDLIEYNDT 231 (252)
T ss_pred cCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999864 699999999986 5778899999998 5799998875
No 350
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.6e-36 Score=322.53 Aligned_cols=207 Identities=21% Similarity=0.265 Sum_probs=168.7
Q ss_pred cccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC-CceeEEEEECCccCCCCCC-CceEEEEccccc--cCCCCC
Q 001507 21 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-PRTSAYVSQQDW--QVAEMT 96 (1065)
Q Consensus 21 iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~-~~~~G~i~~~g~~~~~~~~-~~~~~yv~Q~~~--~~~~lT 96 (1065)
+|+|+|+++++|++++|+||||||||||+++|+|.++|. .+.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 589999999999999999999999999999999998761 0139999999988754332 257999999984 456789
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcc---cccccccCc
Q 001507 97 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT---CADTLVGDE 173 (1065)
Q Consensus 97 v~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~---~~~t~vg~~ 173 (1065)
++||+.+.....+... .....+++++++.+||.+ ..++
T Consensus 81 ~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 121 (230)
T TIGR02770 81 MGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDPEEVLKK----- 121 (230)
T ss_pred HHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCchHHHHhC-----
Confidence 9999977543211000 001223788899999973 3343
Q ss_pred ccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEec
Q 001507 174 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 253 (1065)
Q Consensus 174 ~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~ 253 (1065)
.+..|||||||||+||||++.+|+|++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++..++|++++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 34569999999999999999999999999999999999999999999988653 35677779999999999999999999
Q ss_pred CCcEEEEcCcchHH
Q 001507 254 EGQIVYQGPRVSVL 267 (1065)
Q Consensus 254 ~G~i~~~G~~~~~~ 267 (1065)
+|+++..|+++++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999887764
No 351
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.6e-36 Score=323.65 Aligned_cols=211 Identities=25% Similarity=0.365 Sum_probs=169.6
Q ss_pred HHHhhhhcCCccc-eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC------
Q 001507 6 LRQLRIYRGNRSK-LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------ 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~-~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~------ 78 (1065)
++++++.+++... ..+|+|+||++++|++++|+||||||||||+++|+|.+.|+ +|+|.++|.++.....
T Consensus 9 ~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 9 VHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred EeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHH
Confidence 3455555443221 35999999999999999999999999999999999998775 9999999987754321
Q ss_pred -CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHH
Q 001507 79 -PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIM 157 (1065)
Q Consensus 79 -~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l 157 (1065)
++.++|++|++.+++.+||.||+.+....+... . ......+++++
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~---~-------------------------------~~~~~~~~~~l 131 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGES---S-------------------------------RQSRNGAKALL 131 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCC---H-------------------------------HHHHHHHHHHH
Confidence 246999999998889899999998754321100 0 00123477889
Q ss_pred HHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecC
Q 001507 158 KILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQ 237 (1065)
Q Consensus 158 ~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~ 237 (1065)
+.+||.+..+..+ ..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|
T Consensus 132 ~~~~l~~~~~~~~-----~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH 205 (228)
T PRK10584 132 EQLGLGKRLDHLP-----AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNRE-HGTTLILVTH 205 (228)
T ss_pred HHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEec
Confidence 9999987666554 469999999999999999999999999999999999999999999998653 3566777889
Q ss_pred CchHHHhhcccEEEecCCcEEEE
Q 001507 238 PAPEAYELFDDVILLSEGQIVYQ 260 (1065)
Q Consensus 238 ~~~~~~~~~D~v~~l~~G~i~~~ 260 (1065)
+.+++. .+|++++|++|++++.
T Consensus 206 ~~~~~~-~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 206 DLQLAA-RCDRRLRLVNGQLQEE 227 (228)
T ss_pred CHHHHH-hCCEEEEEECCEEEec
Confidence 988874 5999999999998753
No 352
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.7e-36 Score=321.98 Aligned_cols=206 Identities=21% Similarity=0.286 Sum_probs=168.8
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPR 80 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~ 80 (1065)
+++++.+. ..+.+|+|+||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++
T Consensus 5 ~~l~~~~~--~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 5 EHVSKAYL--GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EeeEEEec--CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHh
Confidence 34554442 1246999999999999999999999999999999999998775 999999998765432 235
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+||+||+.+.....+.. . .+....++++++.+
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~ 125 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGAS--G--------------------------------DDIRRRVSAALDKV 125 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCC--H--------------------------------HHHHHHHHHHHHHc
Confidence 7999999998888999999998864322100 0 00112367788999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..++.+ ..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+. ++++++++|+.+
T Consensus 126 ~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~ 198 (222)
T PRK10908 126 GLLDKAKNFP-----IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV--GVTVLMATHDIG 198 (222)
T ss_pred CChhhhhCCc-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 9987666544 469999999999999999999999999999999999999999999988643 567777999999
Q ss_pred HHHhhcccEEEecCCcEE
Q 001507 241 EAYELFDDVILLSEGQIV 258 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~ 258 (1065)
++..++|++++|++|+++
T Consensus 199 ~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 199 LISRRSYRMLTLSDGHLH 216 (222)
T ss_pred HHHHhCCEEEEEECCEEc
Confidence 999999999999999975
No 353
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=3.7e-36 Score=341.21 Aligned_cols=199 Identities=27% Similarity=0.447 Sum_probs=170.5
Q ss_pred CceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-------CCCceEEEEccccccCCCCC
Q 001507 24 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 96 (1065)
Q Consensus 24 ~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lT 96 (1065)
|+||++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++++|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999999875 99999999876432 12467999999999999999
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccc
Q 001507 97 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 176 (1065)
Q Consensus 97 v~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 176 (1065)
|+||+.|+..... . .+.+..++++++.+||.+..++.+ .
T Consensus 92 v~enl~~~~~~~~--~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------------------------------SERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h----------------------------------hHHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999988643110 0 001223778899999988776654 4
Q ss_pred cCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCc
Q 001507 177 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 256 (1065)
Q Consensus 177 ~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~ 256 (1065)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.++ .+.++++++|+.+++..++|++++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAE-FGIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 69999999999999999999999999999999999999999999998754 35667779999999999999999999999
Q ss_pred EEEEcCcchHH
Q 001507 257 IVYQGPRVSVL 267 (1065)
Q Consensus 257 i~~~G~~~~~~ 267 (1065)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999987764
No 354
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=8.2e-36 Score=317.64 Aligned_cols=195 Identities=28% Similarity=0.418 Sum_probs=166.6
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~~~~~ 786 (1065)
+.+|+|+||++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLLG 95 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhcC
Confidence 679999999999999999999999999999999999876 568999999987632 124567999999999998
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+|+.||+.+...... .....+..+.++++++.+++.+..+..+ ..||+|||||++|||+|+.+|++|+||||
T Consensus 96 ~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrv~laral~~~p~illlDEP 168 (220)
T TIGR02982 96 FLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLSGGQKQRVAIARALVHRPKLVLADEP 168 (220)
T ss_pred CCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 8999999998654321 1233444567889999999977666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 001507 867 TSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 919 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 919 (1065)
|+|||+.++..+.+.|+++.+ .|+|||+++|+++ ..+.+|++++|.+ |++
T Consensus 169 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 169 TAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 999999999999999999876 4899999999975 4578999999984 664
No 355
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-36 Score=330.81 Aligned_cols=216 Identities=23% Similarity=0.305 Sum_probs=175.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.+++. .+.+|+|+|+++++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++
T Consensus 11 ~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 11 KNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred EEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhhee
Confidence 4555554332 245899999999999999999999999999999999998775 999999998775432 245799
Q ss_pred EEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 84 YVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 84 yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|++|++. +++..|+++|+.|.....+.. . ......++++++.+||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l 132 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVP--Y--------------------------------DEMHRRVSEALKQVDM 132 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCC
Confidence 9999985 678889999998864321100 0 0011236788999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
.+..++.+ +.||||||||++||||++.+|++++|||||+|||+.++..+++.|+++.+. .+++|++++|+.+++
T Consensus 133 ~~~~~~~~-----~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tiiivtH~~~~~ 206 (269)
T PRK13648 133 LERADYEP-----NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSE-HNITIISITHDLSEA 206 (269)
T ss_pred chhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCchHH
Confidence 87666544 569999999999999999999999999999999999999999999988653 356777789999988
Q ss_pred HhhcccEEEecCCcEEEEcCcchHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.. +|++++|++|++++.|+++++.
T Consensus 207 ~~-~d~i~~l~~G~i~~~g~~~~~~ 230 (269)
T PRK13648 207 ME-ADHVIVMNKGTVYKEGTPTEIF 230 (269)
T ss_pred hc-CCEEEEEECCEEEEecCHHHHh
Confidence 75 9999999999999999987764
No 356
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=322.92 Aligned_cols=204 Identities=23% Similarity=0.281 Sum_probs=167.8
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC-e--eEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-I--IEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~-~--~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. + .+|+|.++|.++.. ..+++.++|++|++.
T Consensus 19 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 98 (259)
T PRK14260 19 TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPN 98 (259)
T ss_pred CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccc
Confidence 356999999999999999999999999999999999976531 2 48999999987632 234567999999998
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
+++ .|++||+.+....+.. .......+.++++++.+++.+ ..+. .+..||||||||++|||||+.+|+
T Consensus 99 l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LS~G~~qrv~laral~~~p~ 170 (259)
T PRK14260 99 PFP-MSIYENVAYGVRISAK--LPQADLDEIVESALKGAALWQEVKDKLNK-----SALGLSGGQQQRLCIARALAIKPK 170 (259)
T ss_pred cCC-ccHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHcCCcchhhhHhcC-----CcccCCHHHHHHHHHHHHHhcCCC
Confidence 887 8999999876543311 122333456778888888743 2222 235899999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEec----CcEEEEeCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR----GGELIYAGPL 925 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~----gg~~~~~g~~ 925 (1065)
+|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.. .|++++.|++
T Consensus 171 lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 171 VLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFSTDESRIGQMVEFGVT 238 (259)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEeccCCCCceEEEeCCH
Confidence 9999999999999999999999999865 699999999987 67788999999973 4899999975
No 357
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-36 Score=329.68 Aligned_cols=214 Identities=20% Similarity=0.301 Sum_probs=171.8
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|.+.+. .+.+|+|.++|.++... ..+
T Consensus 16 ~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 92 (258)
T PRK14268 16 ENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELR 92 (258)
T ss_pred eeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHh
Confidence 44555443 346999999999999999999999999999999999998642 12599999999876432 124
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++ +||+||+.|+....+.. .+ .....++++++.
T Consensus 93 ~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~--~~--------------------------------~~~~~~~~~l~~ 137 (258)
T PRK14268 93 KNVGMVFQKPNPFP-MSIYDNVAYGPRIHGAN--KK--------------------------------DLDGVVENALRS 137 (258)
T ss_pred hhEEEEecCCccCc-ccHHHHHHHHHHHcCCC--HH--------------------------------HHHHHHHHHHHH
Confidence 56999999988787 89999998864322100 00 011236778888
Q ss_pred hCCc----ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEe
Q 001507 160 LGLD----TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 235 (1065)
Q Consensus 160 lgL~----~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~ 235 (1065)
+|+. +..++ .+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++|+++
T Consensus 138 ~~l~~~~~~~~~~-----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~---~~tiiiv 209 (258)
T PRK14268 138 AALWDETSDRLKS-----PALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK---DYTIVIV 209 (258)
T ss_pred cCCCcchhhhhcC-----ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh---CCEEEEE
Confidence 8884 23333 3457999999999999999999999999999999999999999999998853 4677779
Q ss_pred cCCchHHHhhcccEEEecCCcEEEEcCcchH
Q 001507 236 LQPAPEAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 236 ~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+|+.+++.++||++++|++|++++.|+++++
T Consensus 210 sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 210 THNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred ECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999988766
No 358
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-36 Score=358.94 Aligned_cols=208 Identities=27% Similarity=0.329 Sum_probs=174.4
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+|||+|++.+++
T Consensus 16 ~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~ 93 (510)
T PRK09700 16 GPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINYNKLDHKLAAQLGIGIIYQELSVID 93 (510)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEECCCCCHHHHHHCCeEEEeecccccC
Confidence 34679999999999999999999999999999999999876 4689999999876431 12356999999998999
Q ss_pred CCCHHHHHHHHhhcc----CCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 787 GLTVLESLLFSAWLR----LPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
.+||+||+.++.... ........+..++++++++.+++.+..++.+ .+|||||||||+|||+|+.+|+|||
T Consensus 94 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~lll 168 (510)
T PRK09700 94 ELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----ANLSISHKQMLEIAKTLMLDAKVII 168 (510)
T ss_pred CCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999998753211 0000122334466889999999987766654 5799999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
|||||+|||+.++..+++.|++++++|+|||++||+++ .+...||++++|. +|++++.|++.+
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~-~G~i~~~g~~~~ 231 (510)
T PRK09700 169 MDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMK-DGSSVCSGMVSD 231 (510)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEeeecchhh
Confidence 99999999999999999999999877999999999986 5677899999998 589999988754
No 359
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=1.2e-35 Score=316.43 Aligned_cols=199 Identities=24% Similarity=0.326 Sum_probs=163.8
Q ss_pred ccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCC
Q 001507 704 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI 783 (1065)
Q Consensus 704 ~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~ 783 (1065)
.+.+..++++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...
T Consensus 26 ~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~ 94 (224)
T cd03220 26 LGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGG 94 (224)
T ss_pred hhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hccccc
Confidence 344455677889999999999999999999999999999999999876 568999999976421 111233
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+.+.+||+||+.+....+. .......+.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|||
T Consensus 95 ~~~~~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llll 166 (224)
T cd03220 95 FNPELTGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLI 166 (224)
T ss_pred CCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4567899999988654321 122334456788899999987766654 57999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
||||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|. +|++++.|
T Consensus 167 DEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g 224 (224)
T cd03220 167 DEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLE-KGKIRFDG 224 (224)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEecC
Confidence 9999999999999999999998777899999999976 5667899999998 57887754
No 360
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.1e-36 Score=316.30 Aligned_cols=189 Identities=24% Similarity=0.309 Sum_probs=163.2
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHH
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 791 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~ 791 (1065)
++.+++++||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.....++.++|++|++.+++.+|++
T Consensus 23 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i~~~~~~~~i~~~~q~~~~~~~~t~~ 100 (214)
T PRK13543 23 EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTATRGDRSRFMAYLGHLPGLKADLSTL 100 (214)
T ss_pred CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEccchhhhhceEEeecCcccccCCcHH
Confidence 4569999999999999999999999999999999999877 56899999998765433455699999999888889999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCC
Q 001507 792 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 871 (1065)
Q Consensus 792 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD 871 (1065)
||+.+....+. .. ..+.++++++.+++.+..+..+ ..||||||||++|||+++.+|++|+|||||+|||
T Consensus 101 e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 169 (214)
T PRK13543 101 ENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKKRLALARLWLSPAPLWLLDEPYANLD 169 (214)
T ss_pred HHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 99987654321 11 2234678889999887666544 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe
Q 001507 872 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 914 (1065)
Q Consensus 872 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 914 (1065)
+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++++
T Consensus 170 ~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 170 LEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 99999999999998878999999999987 6788999999986
No 361
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5.1e-36 Score=322.25 Aligned_cols=201 Identities=25% Similarity=0.320 Sum_probs=167.0
Q ss_pred ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--CCCceEEEEc-cccccCCC
Q 001507 18 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVS-QQDWQVAE 94 (1065)
Q Consensus 18 ~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--~~~~~~~yv~-Q~~~~~~~ 94 (1065)
.+++|+|+||++++|++++|+|||||||||||++|+|.+.|+ +|+|.++|.+.... ..++.++|++ |++.+++.
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 457999999999999999999999999999999999998775 99999999865332 2345789998 55677788
Q ss_pred CCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcc
Q 001507 95 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 174 (1065)
Q Consensus 95 lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~ 174 (1065)
+||+||+.+.....+... ++....++.+++.+||++..++.++
T Consensus 110 ~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~--- 152 (236)
T cd03267 110 LPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPVR--- 152 (236)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCChh---
Confidence 999999987643221100 0011236778889999887777654
Q ss_pred cccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecC
Q 001507 175 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 254 (1065)
Q Consensus 175 ~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~ 254 (1065)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. ++.+|++++|+.+++..+||++++|++
T Consensus 153 --~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~~ 229 (236)
T cd03267 153 --QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRE-RGTTVLLTSHYMKDIEALARRVLVIDK 229 (236)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 59999999999999999999999999999999999999999999998653 356777799999999999999999999
Q ss_pred CcEEEEc
Q 001507 255 GQIVYQG 261 (1065)
Q Consensus 255 G~i~~~G 261 (1065)
|++++.|
T Consensus 230 G~i~~~g 236 (236)
T cd03267 230 GRLLYDG 236 (236)
T ss_pred CEEEecC
Confidence 9998765
No 362
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-36 Score=330.63 Aligned_cols=214 Identities=23% Similarity=0.332 Sum_probs=174.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCceE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTS 82 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~~ 82 (1065)
+++++.++. ...+|+|+||+|++||+++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.+
T Consensus 5 ~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 5 ENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhhe
Confidence 344544432 235999999999999999999999999999999999998775 999999998875432 23569
Q ss_pred EEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 83 AYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 83 ~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
+|++|++. .+...||+||+.|.....+.. .....+.++++++.+|
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 125 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLP----------------------------------PIEIRKRVDRALAEIG 125 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCC
Confidence 99999975 466789999998754321100 0001223778899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..++.+ ..||||||||++|||||+.+|+|++|||||+|||+.++..+++.|+++.. .++||++++|+.++
T Consensus 126 l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~ 198 (274)
T PRK13644 126 LEKYRHRSP-----KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEE 198 (274)
T ss_pred CHHHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHH
Confidence 988776654 46999999999999999999999999999999999999999999998864 36677779999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+ ..||++++|++|++++.|+++++.
T Consensus 199 ~-~~~d~v~~l~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 199 L-HDADRIIVMDRGKIVLEGEPENVL 223 (274)
T ss_pred H-hhCCEEEEEECCEEEEECCHHHHh
Confidence 8 569999999999999999987763
No 363
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=326.45 Aligned_cols=200 Identities=26% Similarity=0.315 Sum_probs=169.6
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCC-CCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 788 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~-~~~~l 788 (1065)
+.+|+|+|+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++. .++..
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGA 97 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccC
Confidence 459999999999999999999999999999999999887 568999999987643 234667999999974 56778
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
||.||+.+..... ........++++++++.+++.+..++.. ..||||||||++|||||+.+|++|||||||+
T Consensus 98 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~lAraL~~~p~llllDEPt~ 169 (277)
T PRK13642 98 TVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSGGQKQRVAVAGIIALRPEIIILDESTS 169 (277)
T ss_pred CHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998764322 1223334456789999999987766543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 869 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+.++..+.+.|++++++ |.|||++||+++. + ..+|++++|++ |+++..|+.
T Consensus 170 ~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~~g~~ 224 (277)
T PRK13642 170 MLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIKEAAP 224 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999865 9999999999863 4 46999999985 789888875
No 364
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=7.2e-36 Score=318.96 Aligned_cols=205 Identities=27% Similarity=0.367 Sum_probs=172.2
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCCCceEEEEcc
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQ 87 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~yv~Q 87 (1065)
++++.++ +..+|+|+||++++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .+.++|++|
T Consensus 5 ~v~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q 77 (223)
T TIGR03740 5 NLSKRFG---KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIE 77 (223)
T ss_pred eEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcC
Confidence 4444443 246999999999999999999999999999999999998775 999999998764322 357999999
Q ss_pred ccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccccc
Q 001507 88 QDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCAD 167 (1065)
Q Consensus 88 ~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~ 167 (1065)
++.+++.+|++||+.+.....+. .+..+.++++.+||.+..|
T Consensus 78 ~~~~~~~~t~~~~~~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~ 119 (223)
T TIGR03740 78 SPPLYENLTARENLKVHTTLLGL--------------------------------------PDSRIDEVLNIVDLTNTGK 119 (223)
T ss_pred CCCccccCCHHHHHHHHHHHcCC--------------------------------------CHHHHHHHHHHcCCcHHHh
Confidence 99888889999999875432110 0123677889999987666
Q ss_pred ccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcc
Q 001507 168 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 247 (1065)
Q Consensus 168 t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D 247 (1065)
..+ ..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++ .+.+|++++|+.+++..+||
T Consensus 120 ~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~~tiii~sH~~~~~~~~~d 192 (223)
T TIGR03740 120 KKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE--QGITVILSSHILSEVQQLAD 192 (223)
T ss_pred hhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhcC
Confidence 544 46999999999999999999999999999999999999999999999864 25667779999999999999
Q ss_pred cEEEecCCcEEEEcCcc
Q 001507 248 DVILLSEGQIVYQGPRV 264 (1065)
Q Consensus 248 ~v~~l~~G~i~~~G~~~ 264 (1065)
++++|++|++++.|++.
T Consensus 193 ~i~~l~~g~i~~~~~~~ 209 (223)
T TIGR03740 193 HIGIISEGVLGYQGKIN 209 (223)
T ss_pred EEEEEeCCEEEEecChh
Confidence 99999999999999764
No 365
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=322.84 Aligned_cols=207 Identities=24% Similarity=0.316 Sum_probs=165.9
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14240 15 DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPN 94 (250)
T ss_pred CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCc
Confidence 356999999999999999999999999999999999975321 258999999987642 234567999999988
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++ +|++||+.+....+.. .......+.++++++.+++.+...... ...+..||||||||++|||+|+.+|++|+|
T Consensus 95 ~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~llll 170 (250)
T PRK14240 95 PFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRL-KKSALGLSGGQQQRLCIARALAVEPEVLLM 170 (250)
T ss_pred cCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHH-hcCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 887 8999999986543211 122334456778888888742111111 112358999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++. +++|||++||+++ .+...+|++++|++ |+++..|+.
T Consensus 171 DEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (250)
T PRK14240 171 DEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFLN-GEIVEFGDT 229 (250)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999985 4899999999976 57788999999985 799988864
No 366
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-36 Score=328.87 Aligned_cols=217 Identities=22% Similarity=0.299 Sum_probs=172.7
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC--ceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~--~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.+++ ..+|+|+||++++||+++|+|+||||||||+++|+|.+.+.. +.+|+|.++|.++... ..
T Consensus 10 ~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 86 (254)
T PRK14273 10 TENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILEL 86 (254)
T ss_pred EeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHH
Confidence 3455555532 459999999999999999999999999999999999987521 2489999999876421 12
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++ +||+||+.|+....+.. .. ...+..++++++
T Consensus 87 ~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~---~~------------------------------~~~~~~~~~~l~ 132 (254)
T PRK14273 87 RRKIGMVFQTPNPFL-MSIYDNISYGPKIHGTK---DK------------------------------KKLDEIVEQSLK 132 (254)
T ss_pred hhceEEEeecccccc-CcHHHHHHHHHHhcCCC---CH------------------------------HHHHHHHHHHHH
Confidence 457999999988775 89999998864322100 00 001223667778
Q ss_pred HhCCc----ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEE
Q 001507 159 ILGLD----TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVIS 234 (1065)
Q Consensus 159 ~lgL~----~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~ 234 (1065)
.+|+. +..++. ++.|||||||||+|||||+.+|++++|||||+|||+.++..+++.|+++++ +.+|++
T Consensus 133 ~~~l~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii 204 (254)
T PRK14273 133 KSALWNEVKDKLNTN-----ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE---SYTIII 204 (254)
T ss_pred HhCCchhhHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc---CCEEEE
Confidence 88873 334443 457999999999999999999999999999999999999999999999852 367777
Q ss_pred ecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 235 LLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 235 ~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|+.+++..++|++++|++|+++..|+++++.
T Consensus 205 ~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 205 VTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999987764
No 367
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=323.31 Aligned_cols=207 Identities=22% Similarity=0.255 Sum_probs=169.3
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCCc-----ccccceEEEEcCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 782 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~ 782 (1065)
+++.+|+|+||++++||++||+|+||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.++|++|++
T Consensus 19 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 98 (261)
T PRK14263 19 GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQP 98 (261)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCC
Confidence 4567999999999999999999999999999999999986531 258999999987632 23456799999998
Q ss_pred CCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 783 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 783 ~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
.++ .+|+.||+.+....+.. .....+.++++++.+++.+..+.... ...+.||||||||++|||||+.+|++|+
T Consensus 99 ~~~-~~tv~enl~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv~laral~~~p~lll 172 (261)
T PRK14263 99 NPF-SMSIFDNVAFGLRLNRY----KGDLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRLCIARAIATEPEVLL 172 (261)
T ss_pred ccc-cccHHHHHHHHHhhcCc----hHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 877 59999999987543321 12234567888999988543221111 1346799999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe-------cCcEEEEeCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-------RGGELIYAGPL 925 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-------~gg~~~~~g~~ 925 (1065)
|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+ ++|+++..|+.
T Consensus 173 lDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 173 LDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 999999999999999999999985 4799999999986 5778899999996 36899999875
No 368
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.7e-34 Score=355.18 Aligned_cols=123 Identities=23% Similarity=0.336 Sum_probs=98.3
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccCcccCCCCCCCCHHHHHHHHHHHHHHh---CCCcee
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVA---NPSIVF 862 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGqrqr~~ia~~l~~---~p~il~ 862 (1065)
.+||.|.+.|...+.. .....++++.+||... .+.. ...|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~~---------i~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVPS---------ISRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhccc---------hhHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 4566777766543210 1124577888888643 3332 35799999999999999997 599999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe-----cCcEEEEeCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 925 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gg~~~~~g~~ 925 (1065)
|||||+|||+.....+++.|+++.++|.|||+++|+++ ....+|++++|. +||++++.|++
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999878999999999976 346799999993 47999999975
No 369
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=331.28 Aligned_cols=214 Identities=26% Similarity=0.327 Sum_probs=173.5
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-----CCCce
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRT 81 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-----~~~~~ 81 (1065)
+++++.+++ +.+|+|+||++++|++++|+|||||||||||++|+|.+.|+ +|+|.++|.++... ..++.
T Consensus 5 ~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 5 SDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred EEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhh
Confidence 455555532 45999999999999999999999999999999999999775 99999999886421 12356
Q ss_pred EEEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 82 SAYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 82 ~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
++|++|++. .+...|+.||+.+.....+.. . .+....++++++.+
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~ 124 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVP--E--------------------------------AEITRRVDEALTLV 124 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHc
Confidence 999999975 244568999998754321100 0 00112367789999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..++.+ ..||||||||++|||||+.+|+++||||||+|||+.++..+.+.|+++... +++|++++|+.+
T Consensus 125 ~l~~~~~~~~-----~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tii~vtH~~~ 197 (271)
T PRK13638 125 DAQHFRHQPI-----QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQ--GNHVIISSHDID 197 (271)
T ss_pred CCHhHhcCCc-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHH
Confidence 9987766554 469999999999999999999999999999999999999999999998642 567777999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++..++|++++|++|++++.|+++++.
T Consensus 198 ~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 198 LIYEISDAVYVLRQGQILTHGAPGEVF 224 (271)
T ss_pred HHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999887653
No 370
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-36 Score=317.41 Aligned_cols=195 Identities=24% Similarity=0.338 Sum_probs=164.0
Q ss_pred CceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEEEccccccCCCCCHHHHHH
Q 001507 24 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRETLD 102 (1065)
Q Consensus 24 ~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l~ 102 (1065)
|+||++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999775 999999998775432 2357999999999899999999998
Q ss_pred HHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccccCchhh
Q 001507 103 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 182 (1065)
Q Consensus 103 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGq 182 (1065)
++...... .. ...+..++++++.+||.+..++.+ ..|||||
T Consensus 93 ~~~~~~~~---~~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGLK---LT-------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred cccccccC---cc-------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 75321100 00 001223778899999987766654 4699999
Q ss_pred hhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEEEEc
Q 001507 183 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 261 (1065)
Q Consensus 183 kqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G 261 (1065)
|||++||||++.+|++++|||||+|||+.++..+.+.|+++++. .+.+|++++|+.+++.++||++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAE-TKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999999999999998653 3567777999999999999999999999998754
No 371
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=329.05 Aligned_cols=225 Identities=22% Similarity=0.293 Sum_probs=178.3
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC--------CC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--------VP 78 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~--------~~ 78 (1065)
+++++.++ +..+|+|+||++++||+++|+||||||||||+++|+|.+.|+...+|+|.++|.++... ..
T Consensus 8 ~nl~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 84 (262)
T PRK09984 8 EKLAKTFN---QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKS 84 (262)
T ss_pred eeEEEEeC---CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHH
Confidence 45555543 34699999999999999999999999999999999999987534579999999876432 11
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++.+||+||+.+....... ... . ..+.. ....+.+++++++
T Consensus 85 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~--~~~------~---~~~~~---------------~~~~~~~~~~~l~ 138 (262)
T PRK09984 85 RANTGYIFQQFNLVNRLSVLENVLIGALGSTP--FWR------T---CFSWF---------------TREQKQRALQALT 138 (262)
T ss_pred HhheEEEccccccccCCcHHHHHHhhhccccc--chh------h---hcccc---------------cHHHHHHHHHHHH
Confidence 34689999999889999999999875321000 000 0 00000 0011234788999
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||++..++.+ ..|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++++. .+++|++++|+
T Consensus 139 ~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~ 212 (262)
T PRK09984 139 RVGMVHFAHQRV-----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQ 212 (262)
T ss_pred HcCCHHHHhCCc-----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCC
Confidence 999987666654 469999999999999999999999999999999999999999999998753 35777789999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
.+++..+||++++|++|++++.|+++++
T Consensus 213 ~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 213 VDYALRYCERIVALRQGHVFYDGSSQQF 240 (262)
T ss_pred HHHHHHhCCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999987654
No 372
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=6.2e-36 Score=313.52 Aligned_cols=186 Identities=27% Similarity=0.334 Sum_probs=160.1
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~l 788 (1065)
+++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+
T Consensus 11 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (201)
T cd03231 11 DGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTL 88 (201)
T ss_pred CCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccccHHhhhheEEeccccccCCCc
Confidence 34579999999999999999999999999999999999876 568999999987532 23556799999999888899
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
|++||+.+.... . ..++++++++.+++.+..++.. ..||||||||++|||+|+.+|++|+|||||+
T Consensus 89 tv~e~l~~~~~~------~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~ 154 (201)
T cd03231 89 SVLENLRFWHAD------H---SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQRRVALARLLLSGRPLWILDEPTT 154 (201)
T ss_pred CHHHHHHhhccc------c---cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Confidence 999999875311 0 2345788999999987766543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEE
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 913 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 913 (1065)
|||+.++..+.+.|+++.++|+|+|++||++. +....+++++++
T Consensus 155 ~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 155 ALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 99999999999999998777999999999986 567788888776
No 373
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.7e-36 Score=321.90 Aligned_cols=204 Identities=24% Similarity=0.356 Sum_probs=167.3
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-----CCCce
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRT 81 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-----~~~~~ 81 (1065)
+++++.+++ ..+|+++||++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++... ..++.
T Consensus 4 ~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 4 KNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred EEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhc
Confidence 345554432 46999999999999999999999999999999999998775 99999999876421 12457
Q ss_pred EEEEccccccCCCCCHHHHHHHHhh-ccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
++|++|++.+++.+|++||+.++.. .++. + . .+....++++++.+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~----~--~----------------------------~~~~~~~~~~l~~~ 123 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGM----S--K----------------------------AEAEERALELLEKV 123 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCC----C--H----------------------------HHHHHHHHHHHHHc
Confidence 9999999998988999999987532 1100 0 0 00122367788999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||++..++.+ ..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++. +++|++++|+.+
T Consensus 124 ~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~--~~tvi~~sh~~~ 196 (213)
T cd03262 124 GLADKADAYP-----AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMVVVTHEMG 196 (213)
T ss_pred CCHhHhhhCc-----cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHH
Confidence 9987666554 469999999999999999999999999999999999999999999998752 566777999999
Q ss_pred HHHhhcccEEEecCCcE
Q 001507 241 EAYELFDDVILLSEGQI 257 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i 257 (1065)
++.++||++++|++|++
T Consensus 197 ~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 197 FAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhCCEEEEEeCCcC
Confidence 99999999999999974
No 374
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=322.28 Aligned_cols=208 Identities=24% Similarity=0.262 Sum_probs=166.7
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCCc----ccccceEEEEcCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ----ETFARISGYCEQNDI 783 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~~ 783 (1065)
+++.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~ 93 (249)
T PRK14253 14 GENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPN 93 (249)
T ss_pred CCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCC
Confidence 3457999999999999999999999999999999999986531 358999999987531 234567999999998
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++ .|+.||+.+....... .......+++.++++.+++.+....... .....|||||||||+|||+|+.+|+||||
T Consensus 94 ~~~-~tv~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~llll 169 (249)
T PRK14253 94 PFP-MSIYENVAYGLRAQGI--KDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFGLSGGQQQRLCIARTIAMEPDVILM 169 (249)
T ss_pred cCc-ccHHHHHHhHHHhcCC--CchHHHHHHHHHHHHHcCCchhhhHHhh-cCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 887 8999999876432211 1122334556778888887532111111 12357999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+ +|+++..|+.
T Consensus 170 DEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 228 (249)
T PRK14253 170 DEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFL-MGELVEHDDT 228 (249)
T ss_pred eCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999865 689999999986 5778899999998 5899998874
No 375
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=6.3e-36 Score=316.89 Aligned_cols=199 Identities=21% Similarity=0.313 Sum_probs=167.0
Q ss_pred cccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-CCCceEEEEccccccCCCCCHHH
Q 001507 21 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-VPPRTSAYVSQQDWQVAEMTVRE 99 (1065)
Q Consensus 21 iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-~~~~~~~yv~Q~~~~~~~lTv~e 99 (1065)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 468999999999999999999999999999999999776 99999999886542 23467999999999899899999
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccccCc
Q 001507 100 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 179 (1065)
Q Consensus 100 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LS 179 (1065)
|+.+...... .. . ...+..++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KL--N-------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Cc--c-------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9987532110 00 0 001223678899999987666554 4699
Q ss_pred hhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEEE
Q 001507 180 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 259 (1065)
Q Consensus 180 GGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~ 259 (1065)
||||||++||||++.+|++++|||||+|||..++..+.+.|+++.+. ++++|++++|+.+++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999998653 35677779999999999999999999999998
Q ss_pred EcC
Q 001507 260 QGP 262 (1065)
Q Consensus 260 ~G~ 262 (1065)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 376
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.3e-35 Score=321.07 Aligned_cols=201 Identities=22% Similarity=0.254 Sum_probs=164.9
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--CeeEEEEEECCccCCcccc-cceEEEEcCCCC--CCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQETF-ARISGYCEQNDI--HSPG 787 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~--~~~~G~i~i~g~~~~~~~~-~~~~~~v~q~~~--~~~~ 787 (1065)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.++..... ++.++||+|++. +.+.
T Consensus 16 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~ 95 (254)
T PRK10418 16 QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPL 95 (254)
T ss_pred cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCcc
Confidence 3689999999999999999999999999999999998763 1168999999987653322 357999999974 4466
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc---ccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeec
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL---SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 864 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lD 864 (1065)
+|+.+++.+.+..... .. ..++++++++.+++.+. .+.. +..|||||||||+|||||+.+|++||||
T Consensus 96 ~~~~~~~~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~lLlLD 165 (254)
T PRK10418 96 HTMHTHARETCLALGK---PA--DDATLTAALEAVGLENAARVLKLY-----PFEMSGGMLQRMMIALALLCEAPFIIAD 165 (254)
T ss_pred ccHHHHHHHHHHHcCC---Ch--HHHHHHHHHHHcCCCChhhhhhcC-----CcccCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7999998764332211 11 22567889999998752 3332 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 865 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 865 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|. +|+++..|+.
T Consensus 166 EPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 225 (254)
T PRK10418 166 EPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMS-HGRIVEQGDV 225 (254)
T ss_pred CCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999998764 899999999986 5667899999998 5899998875
No 377
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.8e-36 Score=314.17 Aligned_cols=189 Identities=23% Similarity=0.310 Sum_probs=158.4
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~l 788 (1065)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+
T Consensus 12 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (204)
T PRK13538 12 DERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTEL 89 (204)
T ss_pred CCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcccchHHhhhheEEeCCccccCcCC
Confidence 34579999999999999999999999999999999999877 568999999987542 23456789999999888999
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
|+.||+.+....+. . ...++++++++.+++.+..++.. ..||||||||++|||||+.+|++|+|||||+
T Consensus 90 tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~ 158 (204)
T PRK13538 90 TALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQRRVALARLWLTRAPLWILDEPFT 158 (204)
T ss_pred cHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999988654321 1 12356788999999987666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEE
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 913 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 913 (1065)
|||+.++..+.+.|++++++|.|||++||+++ .+...-+|++++
T Consensus 159 ~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 159 AIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 99999999999999998777899999999976 344433555554
No 378
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=335.32 Aligned_cols=218 Identities=18% Similarity=0.291 Sum_probs=173.0
Q ss_pred HHhhhhcCCcc--ceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCC--------C
Q 001507 7 RQLRIYRGNRS--KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE--------F 76 (1065)
Q Consensus 7 ~~~~~~~~~~~--~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~--------~ 76 (1065)
+++++.++++. ...+|+|+||++++||+++|+||||||||||+++|+|.+.|. +|+|.++|.++.. .
T Consensus 10 ~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~ 86 (289)
T PRK13645 10 DNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVK 86 (289)
T ss_pred EEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHH
Confidence 45555554321 135999999999999999999999999999999999999775 9999999987632 1
Q ss_pred CCCceEEEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHH
Q 001507 77 VPPRTSAYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY 155 (1065)
Q Consensus 77 ~~~~~~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 155 (1065)
..++.++|++|++. .+...||+||+.|+....+.. . ......+++
T Consensus 87 ~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~--~--------------------------------~~~~~~~~~ 132 (289)
T PRK13645 87 RLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGEN--K--------------------------------QEAYKKVPE 132 (289)
T ss_pred HHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHH
Confidence 12457999999974 233469999998864321100 0 001123677
Q ss_pred HHHHhCCc-ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEE
Q 001507 156 IMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVIS 234 (1065)
Q Consensus 156 ~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~ 234 (1065)
+++.++|+ +..++. +..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+. .+++|++
T Consensus 133 ll~~~~L~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii 206 (289)
T PRK13645 133 LLKLVQLPEDYVKRS-----PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIM 206 (289)
T ss_pred HHHHcCCChhHhcCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEE
Confidence 88899995 455544 3569999999999999999999999999999999999999999999988653 3567777
Q ss_pred ecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 235 LLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 235 ~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|+.+++.++||++++|++|++++.|+.+++.
T Consensus 207 isH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 207 VTHNMDQVLRIADEVIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999887653
No 379
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.2e-36 Score=323.87 Aligned_cols=221 Identities=21% Similarity=0.275 Sum_probs=173.6
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCc--CCCCceeEEEEECCccCCCCC----CCc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNGHGFKEFV----PPR 80 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~--~~~~~~~G~i~~~g~~~~~~~----~~~ 80 (1065)
+++++.++ +..+|+|+||+|++||+++|+||||||||||+++|+|.+ .| .+|+|.++|.++.... .+.
T Consensus 4 ~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~---~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 4 KDLHVSVE---DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEV---TSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred eeEEEEEC---CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCC---CcceEEECCEecCCCCHHHhhcc
Confidence 44555543 246999999999999999999999999999999999985 34 4999999998765432 123
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+|++||+.+............ . ....+....++++++.+
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~---------------~------------~~~~~~~~~~~~~l~~~ 130 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEE---------------P------------LDLLDFLKLLKAKLALL 130 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccc---------------c------------ccHHHHHHHHHHHHHHc
Confidence 48999999999999999999987543211000000 0 00001123478899999
Q ss_pred CCcc-cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 161 GLDT-CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 161 gL~~-~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
||++ ..++.++ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+++|++++|+.
T Consensus 131 ~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~ 204 (243)
T TIGR01978 131 GMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQ 204 (243)
T ss_pred CCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecH
Confidence 9973 4454432 14999999999999999999999999999999999999999999999864 356777799999
Q ss_pred hHHHhh-cccEEEecCCcEEEEcCcchH
Q 001507 240 PEAYEL-FDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 240 ~~~~~~-~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+++... ||++++|++|++++.|+++++
T Consensus 205 ~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (243)
T TIGR01978 205 RLLNYIKPDYVHVLLDGRIVKSGDVELA 232 (243)
T ss_pred HHHHhhcCCeEEEEeCCEEEEecCHHHh
Confidence 999988 899999999999999988754
No 380
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-36 Score=329.51 Aligned_cols=216 Identities=26% Similarity=0.347 Sum_probs=175.3
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.++. .++.+|+|+|+++++||+++|+||||||||||+++|+|.+.|+ +|+|.++|.++.... .++.++
T Consensus 11 ~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 11 ENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceE
Confidence 445554432 2346999999999999999999999999999999999998775 999999998875422 345799
Q ss_pred EEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 84 YVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 84 yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|++|++. .++.+||+||+.++...... + .......++++++.+||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~----~------------------------------~~~~~~~~~~~l~~~~l 132 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKV----P------------------------------PKKMKDIIDDLAKKVGM 132 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCC----C------------------------------HHHHHHHHHHHHHHcCC
Confidence 9999974 57778999999875432110 0 00012247888999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
.+..++.+ +.||||||||++|||||+.+|++++|||||+|||+.++..+++.|+++++. ++++|++++|+.+++
T Consensus 133 ~~~~~~~~-----~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~ 206 (271)
T PRK13632 133 EDYLDKEP-----QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEA 206 (271)
T ss_pred HHHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHH
Confidence 87776654 469999999999999999999999999999999999999999999998653 446777788998888
Q ss_pred HhhcccEEEecCCcEEEEcCcchHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
. .||++++|++|++++.|+.+++.
T Consensus 207 ~-~~d~v~~l~~G~i~~~g~~~~~~ 230 (271)
T PRK13632 207 I-LADKVIVFSEGKLIAQGKPKEIL 230 (271)
T ss_pred h-hCCEEEEEECCEEEEecCHHHHh
Confidence 5 79999999999999999877653
No 381
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-36 Score=329.50 Aligned_cols=215 Identities=27% Similarity=0.363 Sum_probs=174.8
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-----CCCce
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRT 81 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-----~~~~~ 81 (1065)
+++++.++. ...+|+|+||+|++||+++|+||||||||||+++|+|.+++. +|+|.++|.++... ..++.
T Consensus 5 ~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 5 RDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhh
Confidence 445555532 235999999999999999999999999999999999998775 99999999887421 12457
Q ss_pred EEEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 82 SAYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 82 ~~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
++|++|++. .+...||+||+.++....+. . . .+....+.++++.+
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~----~---~---------------------------~~~~~~~~~~l~~~ 125 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGL----S---K---------------------------EEVEKRVKEALKAV 125 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCC----C---H---------------------------HHHHHHHHHHHHHC
Confidence 999999963 33457999999875321110 0 0 00112367889999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..++.+ +.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++. +++|++++|+.+
T Consensus 126 ~L~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~--~~til~vtH~~~ 198 (275)
T PRK13639 126 GMEGFENKPP-----HHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKE--GITIIISTHDVD 198 (275)
T ss_pred CCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCHH
Confidence 9988777655 469999999999999999999999999999999999999999999998652 567777999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++..+||++++|++|++++.|+++++.
T Consensus 199 ~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 199 LVPVYADKVYVMSDGKIIKEGTPKEVF 225 (275)
T ss_pred HHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999988764
No 382
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.6e-35 Score=323.28 Aligned_cols=203 Identities=26% Similarity=0.298 Sum_probs=165.8
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc-----CCcc---c----ccceEEEEc
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP-----KRQE---T----FARISGYCE 779 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~-----~~~~---~----~~~~~~~v~ 779 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+ +... . .++.++|++
T Consensus 18 ~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 18 PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 3579999999999999999999999999999999999876 568999999987 4321 1 244699999
Q ss_pred CCCC--CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHHHHHHHHHHHHh
Q 001507 780 QNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVA 856 (1065)
Q Consensus 780 q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~ 856 (1065)
|++. +.+.+|+.||+.+...... . .........+.++++.+++.+ ..++. +..||||||||++|||||+.
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~-~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~Gq~qrl~laral~~ 168 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVG-A-RHYGDIRATAGDWLERVEIDAARIDDL-----PTTFSGGMQQRLQIARNLVT 168 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhc-c-CcHHHHHHHHHHHHHHcCCChhHHhCC-----CccCCHHHHHHHHHHHHHhc
Confidence 9974 5677899999976432111 1 112233456788899999863 44433 35799999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 857 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 857 ~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|+||||||||+|||+.+...+.+.|++++++ |.|||++||+++ .+...+|++++|. +|++++.|+.
T Consensus 169 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 236 (258)
T PRK11701 169 HPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRLLVMK-QGRVVESGLT 236 (258)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999999999998765 899999999986 4667899999998 5899998875
No 383
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-36 Score=337.54 Aligned_cols=230 Identities=17% Similarity=0.205 Sum_probs=179.2
Q ss_pred HHHhhhhcCCc-cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC-CceeEEEEECCccCCCCCC-----
Q 001507 6 LRQLRIYRGNR-SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP----- 78 (1065)
Q Consensus 6 ~~~~~~~~~~~-~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~-~~~~G~i~~~g~~~~~~~~----- 78 (1065)
++++++.+... ....+|+||||+|++||+++|+|+||||||||+++|+|++.+. .+.+|+|.++|.++.....
T Consensus 6 v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 85 (330)
T PRK15093 6 IRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRK 85 (330)
T ss_pred EeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHH
Confidence 45666665322 3457999999999999999999999999999999999998642 2358999999988754321
Q ss_pred --CceEEEEccccc--cCCCCCHHHHHHHHhhccCC-CCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHH
Q 001507 79 --PRTSAYVSQQDW--QVAEMTVRETLDFAGQCQGV-GSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVV 153 (1065)
Q Consensus 79 --~~~~~yv~Q~~~--~~~~lTv~e~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 153 (1065)
++.++||+|++. +.+.+||.+++.+....... +..+. .. .+...++
T Consensus 86 ~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~----------------~~-------------~~~~~~~ 136 (330)
T PRK15093 86 LVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQ----------------RF-------------GWRKRRA 136 (330)
T ss_pred HhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccc----------------cH-------------HHHHHHH
Confidence 246999999975 57889999999764221000 00000 00 0012347
Q ss_pred HHHHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEE
Q 001507 154 EYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVI 233 (1065)
Q Consensus 154 ~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii 233 (1065)
.++|+.+||.+..+ +-++.+..|||||||||+|||||+.+|++|+|||||+|||+.++.++++.|+++.++ .+.+|+
T Consensus 137 ~~~L~~~gL~~~~~--~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~tii 213 (330)
T PRK15093 137 IELLHRVGIKDHKD--AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQN-NNTTIL 213 (330)
T ss_pred HHHHHHCCCCChHH--HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEE
Confidence 88999999975321 113445679999999999999999999999999999999999999999999998753 356788
Q ss_pred EecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 234 SLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 234 ~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++|+...+.+++|+|++|++|++++.|+.+++.
T Consensus 214 ~itHdl~~v~~~~dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 214 LISHDLQMLSQWADKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 8999999999999999999999999999987764
No 384
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=321.35 Aligned_cols=207 Identities=28% Similarity=0.363 Sum_probs=167.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 15 ~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14262 15 EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPT 94 (250)
T ss_pred CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCc
Confidence 457999999999999999999999999999999999976421 268999999987642 234567999999988
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++ .|++||+.+....... ......++.++++++.+++.+..+... .....+||||||||++|||||+.+|++|+|
T Consensus 95 ~~~-~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qr~~la~al~~~p~llll 170 (250)
T PRK14262 95 PFP-MSIYDNVAFGPRIHGV--KSKHKLDRIVEESLKKAALWDEVKSEL-NKPGTRLSGGQQQRLCIARALAVEPEVILL 170 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCchhHHHH-hCChhhcCHHHHHHHHHHHHHhCCCCEEEE
Confidence 887 8999999886533211 122233455778888888854211111 112368999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+...+|++++|++ |+++..|+.
T Consensus 171 DEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (250)
T PRK14262 171 DEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GELIEYGPT 229 (250)
T ss_pred eCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999999864 799999999986 57788999999985 799988874
No 385
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=321.80 Aligned_cols=204 Identities=26% Similarity=0.319 Sum_probs=165.8
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCe---eEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGI---IEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~---~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..++.+ .+|+|.++|.++.. ..+++.++|++|++.
T Consensus 16 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (252)
T PRK14272 16 DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPN 95 (252)
T ss_pred CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCc
Confidence 4579999999999999999999999999999999999865322 37999999987632 234567999999999
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccCcccCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 859 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~ 859 (1065)
+++.+|+.||+.+....... ...+...+.++++++.+++.. ..+. .+..||||||||++|||+|+.+|+
T Consensus 96 ~~~~~t~~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LS~G~~qrv~laral~~~p~ 168 (252)
T PRK14272 96 PFPTMSVFDNVVAGLKLAGI--RDRDHLMEVAERSLRGAALWDEVKDRLKT-----PATGLSGGQQQRLCIARALAVEPE 168 (252)
T ss_pred cCcCCCHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCcchhhhhhhcC-----CcccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999876432211 112233445666677776542 2232 236799999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 860 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 860 il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+|||||+|||+.++..+.+.|+++++ ++|||++||+++ .+...+|++++|++ |++++.|+.
T Consensus 169 llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 231 (252)
T PRK14272 169 ILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFLV-GDLVEHGPT 231 (252)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999864 799999999986 56778999999984 799998875
No 386
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=309.03 Aligned_cols=195 Identities=27% Similarity=0.412 Sum_probs=170.3
Q ss_pred CceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-------CCCceEEEEccccccCCCCC
Q 001507 24 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 96 (1065)
Q Consensus 24 ~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-------~~~~~~~yv~Q~~~~~~~lT 96 (1065)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||.-+.+. ..+|++|||+|+..+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 578888776799999999999999999999999987 99999999765332 23588999999999999999
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccc
Q 001507 97 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 176 (1065)
Q Consensus 97 v~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~ 176 (1065)
|+-||.|+.... .....+++.+.||++|..+.. +.
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~-----P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRY-----PG 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhC-----CC
Confidence 999999975321 011267889999999988755 45
Q ss_pred cCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCc
Q 001507 177 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 256 (1065)
Q Consensus 177 ~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~ 256 (1065)
.|||||||||+|+|||++.|++|+||||.+.||.....+++-.|.++.++.+- -|+.++|..+|+.+++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~I-PIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEINI-PILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCC-CEEEEecCHHHHHhhhheEEEecCCe
Confidence 69999999999999999999999999999999999999999999999887644 45668999999999999999999999
Q ss_pred EEEEcCcchHH
Q 001507 257 IVYQGPRVSVL 267 (1065)
Q Consensus 257 i~~~G~~~~~~ 267 (1065)
+...|+.+++.
T Consensus 207 V~A~g~~e~v~ 217 (352)
T COG4148 207 VKASGPLEEVW 217 (352)
T ss_pred EEecCcHHHHh
Confidence 99999998875
No 387
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=322.93 Aligned_cols=213 Identities=23% Similarity=0.304 Sum_probs=171.3
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~---~~~~G~i~i~g 763 (1065)
.+.++++++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~-------------~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFY-------------GDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEE-------------CCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 46667766544 345799999999999999999999999999999999998642 13689999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccCcccC
Q 001507 764 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGL 834 (1065)
Q Consensus 764 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 834 (1065)
.++.. ..+++.++|++|++.+++. |+.||+.+....+.. .. ...++++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~---~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQGY---DG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcCC---cH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2346679999999888775 999999886543321 11 23456788999998853 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEE-EE
Q 001507 835 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL-FM 913 (1065)
Q Consensus 835 ~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~-~l 913 (1065)
+..||||||||++|||+|+.+|+||||||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+...+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 358999999999999999999999999999999999999999999999976 489999999986 5667899976 45
Q ss_pred ecCcEEEEeCCC
Q 001507 914 KRGGELIYAGPL 925 (1065)
Q Consensus 914 ~~gg~~~~~g~~ 925 (1065)
. +|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 5899988874
No 388
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=324.35 Aligned_cols=219 Identities=23% Similarity=0.303 Sum_probs=175.3
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~---~~~~G~i~i~g 763 (1065)
.+..+|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGF-------------AGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEE-------------CCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 45667776554 346799999999999999999999999999999999998652 13689999999
Q ss_pred ccCCc----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCC
Q 001507 764 YPKRQ----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGING 839 (1065)
Q Consensus 764 ~~~~~----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 839 (1065)
.++.. ..+++.++|++|++.+++ .|++||+.+...... .....+..+.+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 234567999999988887 799999987643221 12233334456788888888643221111 12458
Q ss_pred CCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 001507 840 LSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 919 (1065)
Q Consensus 840 lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 919 (1065)
||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|. +|++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~-~G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFF-DGRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEE-CCEE
Confidence 999999999999999999999999999999999999999999999875 589999999986 5778899999998 5899
Q ss_pred EEeCCC
Q 001507 920 IYAGPL 925 (1065)
Q Consensus 920 ~~~g~~ 925 (1065)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 998875
No 389
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=324.72 Aligned_cols=230 Identities=20% Similarity=0.263 Sum_probs=177.8
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC----CCce
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRT 81 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~----~~~~ 81 (1065)
++++++.++ +.++|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .+..
T Consensus 8 ~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 8 VSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred EeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcC
Confidence 345555443 356999999999999999999999999999999999998775 999999998775432 1235
Q ss_pred EEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 82 SAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 82 ~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
++|++|++.+++.+||+||+.++....... +..... .+. +. .. ....+....++++++.+|
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~---~~~~~~------~~~-~~--~~-------~~~~~~~~~~~~~l~~~g 142 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKT---GLFSGL------LKT-PA--FR-------RAESEALDRAATWLERVG 142 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccc---hhhhhh------ccc-cc--cc-------cchhHHHHHHHHHHHhCC
Confidence 899999999999999999998864311000 000000 000 00 00 000011234778899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..++.+ +.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.++ .+++|++++|+.++
T Consensus 143 l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tii~~sH~~~~ 216 (255)
T PRK11300 143 LLEHANRQA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNE-HNVTVLLIEHDMKL 216 (255)
T ss_pred hhhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhh-cCCEEEEEeCCHHH
Confidence 987666554 469999999999999999999999999999999999999999999998653 35677779999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+.++||++++|++|++++.|+++++
T Consensus 217 ~~~~~d~i~~l~~g~i~~~~~~~~~ 241 (255)
T PRK11300 217 VMGISDRIYVVNQGTPLANGTPEEI 241 (255)
T ss_pred HHHhCCEEEEEECCeEEecCCHHHH
Confidence 9999999999999999999987765
No 390
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-36 Score=287.06 Aligned_cols=217 Identities=22% Similarity=0.263 Sum_probs=180.0
Q ss_pred HHHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-------
Q 001507 5 LLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------- 77 (1065)
Q Consensus 5 ~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------- 77 (1065)
.+++++..++. ..+|++||+..+.|+++.|+|.|||||||+|++|.=+-.|. .|.|.+||+.+.-..
T Consensus 8 ~v~dlHK~~G~---~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~---~G~I~v~geei~~k~~~~G~l~ 81 (256)
T COG4598 8 EVEDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---AGSIRVNGEEIRLKRDKDGQLK 81 (256)
T ss_pred ehhHHHhhccc---chhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCC---CceEEECCeEEEeeeCCCCCee
Confidence 45677777654 35999999999999999999999999999999998766665 999999998753211
Q ss_pred ---------CCceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCc
Q 001507 78 ---------PPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQK 148 (1065)
Q Consensus 78 ---------~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (1065)
.+.+.++|+|+..++.++||.||+.-+..- .+...+.+
T Consensus 82 ~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvh---------------------------------VLg~~k~e 128 (256)
T COG4598 82 PADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVH---------------------------------VLGVSKAE 128 (256)
T ss_pred eCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchH---------------------------------hhcCCHHH
Confidence 112469999999999999999999653210 01111222
Q ss_pred chhHHHHHHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCC
Q 001507 149 TSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALD 228 (1065)
Q Consensus 149 ~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~ 228 (1065)
..++++.+|...||.+..|.. +..|||||+||++|||||+.+|+++++|||||+|||+-.-++.+.+++++.+
T Consensus 129 a~e~Ae~~L~kVGi~ek~~~Y-----P~~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeE-- 201 (256)
T COG4598 129 AIERAEKYLAKVGIAEKADAY-----PAHLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEE-- 201 (256)
T ss_pred HHHHHHHHHHHhCchhhhhcC-----ccccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHh--
Confidence 334578899999999887754 4469999999999999999999999999999999999999999999999975
Q ss_pred CEEEEEecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 229 GTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 229 ~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++|.+.++|.+.++.+...+|++|++|.|-++|+++++.
T Consensus 202 grTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~qvf 240 (256)
T COG4598 202 GRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPEQVF 240 (256)
T ss_pred CCeEEEEeeehhHHHhhhhheEEeecceecccCChHHHh
Confidence 566777999999999999999999999999999998873
No 391
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-36 Score=326.20 Aligned_cols=222 Identities=23% Similarity=0.330 Sum_probs=174.5
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCC--C---CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKE--F---VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~--~---~~~ 79 (1065)
+++++.+++ ..+|+|+||++++||+++|+||||||||||+++|+|.++|. .+.+|+|.++|.++.. . ..+
T Consensus 8 ~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (253)
T PRK14267 8 VNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVR 84 (253)
T ss_pred EeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHh
Confidence 455555432 46999999999999999999999999999999999998762 1358999999988742 1 124
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++.+||.||+.++...+...... ......++++++.
T Consensus 85 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~ 132 (253)
T PRK14267 85 REVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSK--------------------------------KELDERVEWALKK 132 (253)
T ss_pred hceeEEecCCccCCCCcHHHHHHHHHHhcCccCCH--------------------------------HHHHHHHHHHHHH
Confidence 57999999999899999999998764322100000 0011236677888
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+||........ ++.+..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++ + .+|++++|+.
T Consensus 133 ~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~ 208 (253)
T PRK14267 133 AALWDEVKDRL-NDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSP 208 (253)
T ss_pred cCCccchhhhh-ccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCH
Confidence 88753211111 234567999999999999999999999999999999999999999999999853 3 6777799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++..+||+|++|++|++++.|+++++.
T Consensus 209 ~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 209 AQAARVSDYVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred HHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999987663
No 392
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=321.71 Aligned_cols=219 Identities=25% Similarity=0.305 Sum_probs=174.1
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~---~~~~G~i~i~g 763 (1065)
.++++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFY-------------GDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEE-------------CCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 46677776554 235799999999999999999999999999999999998652 13689999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCC
Q 001507 764 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 838 (1065)
Q Consensus 764 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 838 (1065)
.++.. ..+++.++|++|++.+++. |++||+.+....... .......+.++++++.+++.+....... ..+.
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 167 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGI--NNRRVLDEAVERSLRGAALWDEVKDRLH-ENAF 167 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCChhHHHHhh-CCcc
Confidence 87642 2346679999999888876 999999876433211 1122334567888888888532111111 1235
Q ss_pred CCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 839 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 839 ~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
.||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++++ +.|||++||+++ ++.+.+|++++|+ +|+
T Consensus 168 ~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~-~G~ 244 (272)
T PRK14236 168 GLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMY-MGK 244 (272)
T ss_pred cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999975 799999999986 5677899999998 589
Q ss_pred EEEeCCC
Q 001507 919 LIYAGPL 925 (1065)
Q Consensus 919 ~~~~g~~ 925 (1065)
++..|+.
T Consensus 245 i~~~g~~ 251 (272)
T PRK14236 245 LVEYGDT 251 (272)
T ss_pred EEecCCH
Confidence 9998875
No 393
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=320.97 Aligned_cols=220 Identities=22% Similarity=0.276 Sum_probs=174.8
Q ss_pred EEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCc
Q 001507 688 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGY 764 (1065)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~ 764 (1065)
+.++|+++.+ +++.+|+|+||++++||++||+|+||||||||+++|+|..++. ...|+|.++|.
T Consensus 8 l~~~nl~~~~-------------~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~ 74 (261)
T PRK14258 8 IKVNNLSFYY-------------DTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQ 74 (261)
T ss_pred EEEeeEEEEe-------------CCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCE
Confidence 5666666544 2346999999999999999999999999999999999986631 13799999998
Q ss_pred cCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCC
Q 001507 765 PKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGING 839 (1065)
Q Consensus 765 ~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 839 (1065)
++.. ..+++.++|++|++.+++ .|+.||+.+....... ....+..+.+.++++.+++.+..+.... ..+..
T Consensus 75 ~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 150 (261)
T PRK14258 75 NIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIH-KSALD 150 (261)
T ss_pred EhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhc-CCccc
Confidence 7531 234567999999988887 8999999876432211 1223334567889999988542211111 12357
Q ss_pred CCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEecCCcHHHHHhcCeEEEEecC--
Q 001507 840 LSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG-- 916 (1065)
Q Consensus 840 lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g-- 916 (1065)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||+++ ++.+.+|++++|+++
T Consensus 151 LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~~ 229 (261)
T PRK14258 151 LSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNEN 229 (261)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCCC
Confidence 999999999999999999999999999999999999999999999865 4899999999986 577889999999852
Q ss_pred --cEEEEeCCC
Q 001507 917 --GELIYAGPL 925 (1065)
Q Consensus 917 --g~~~~~g~~ 925 (1065)
|++++.|++
T Consensus 230 ~~G~i~~~~~~ 240 (261)
T PRK14258 230 RIGQLVEFGLT 240 (261)
T ss_pred cCceEEEeCCH
Confidence 899999876
No 394
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-36 Score=323.84 Aligned_cols=222 Identities=19% Similarity=0.286 Sum_probs=175.4
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++. +.+|+|+|+++++||+++|+||||||||||+++|+|.+.+..+.+|+|.++|+++.... .++.+
T Consensus 5 ~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i 81 (246)
T PRK14269 5 TTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNV 81 (246)
T ss_pred eeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhE
Confidence 4556665542 46999999999999999999999999999999999987542345999999999875432 24579
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+|++|++.+++ .||+||+.++...++.... . ...+.+++++++.+||
T Consensus 82 ~~~~q~~~l~~-~tv~eni~~~~~~~~~~~~-------------------~-------------~~~~~~~~~~l~~~~l 128 (246)
T PRK14269 82 GMVFQQPNVFV-KSIYENISYAPKLHGMIKN-------------------K-------------DEEEALVVDCLQKVGL 128 (246)
T ss_pred EEEecCCcccc-ccHHHHhhhHHhhcCcccC-------------------h-------------HHHHHHHHHHHHHcCC
Confidence 99999998887 6999999876432210000 0 0012236778899998
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
........ ++..+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++++++++|+.+++
T Consensus 129 ~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~ 204 (246)
T PRK14269 129 FEEVKDKL-KQNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH---NLSMIMVTHNMQQG 204 (246)
T ss_pred ChhhhHHh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC---CCEEEEEecCHHHH
Confidence 53211111 234567999999999999999999999999999999999999999999998752 46777799999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++|++++|++|++++.|+.+++.
T Consensus 205 ~~~~d~i~~l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 205 KRVADYTAFFHLGELIEFGESKEFF 229 (246)
T ss_pred HhhCcEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999887763
No 395
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=321.33 Aligned_cols=207 Identities=23% Similarity=0.280 Sum_probs=165.7
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||+|++|++++|+||||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 16 ~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 95 (251)
T PRK14249 16 KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPN 95 (251)
T ss_pred CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCc
Confidence 456999999999999999999999999999999999986631 236999999987532 234677999999998
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++. |++||+.+....+... ..+...+.++++++.+++.+...... ...+..||||||||++|||||+.+|++|+|
T Consensus 96 ~~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~~LS~Gq~qrv~laral~~~p~lllL 171 (251)
T PRK14249 96 PFPK-SIFDNVAFGPRMLGTT--AQSRLDEVVEKSLRQAALWDEVKDNL-HKSGLALSGGQQQRLCIARVLAIEPEVILM 171 (251)
T ss_pred cCcC-cHHHHHhhHHHhcCCC--hhhHHHHHHHHHHHHhCCchhhhhHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8875 9999999875433111 11223345677788888753211111 112468999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++. +++|||++||+++ .+.+.+|++++|. +|++++.|+.
T Consensus 172 DEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 230 (251)
T PRK14249 172 DEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLL-TGDLVEYGRT 230 (251)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEe-CCeEEEeCCH
Confidence 99999999999999999999985 5899999999986 5677899999998 5799988875
No 396
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-36 Score=324.45 Aligned_cols=213 Identities=25% Similarity=0.308 Sum_probs=173.7
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCC------C---C
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE------F---V 77 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~------~---~ 77 (1065)
+++++.+++ +.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . .
T Consensus 6 ~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 6 NGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHH
Confidence 455555432 46999999999999999999999999999999999998775 9999999987521 0 1
Q ss_pred CCceEEEEccccccCCCCCHHHHHHHH-hhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHH
Q 001507 78 PPRTSAYVSQQDWQVAEMTVRETLDFA-GQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYI 156 (1065)
Q Consensus 78 ~~~~~~yv~Q~~~~~~~lTv~e~l~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 156 (1065)
.++.++|++|++.+++.+||+||+.+. ....+.. . .+....++++
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~---~-------------------------------~~~~~~~~~~ 125 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLS---K-------------------------------DQALARAEKL 125 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCC---H-------------------------------HHHHHHHHHH
Confidence 235699999999989999999999753 1111100 0 0011237788
Q ss_pred HHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEec
Q 001507 157 MKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLL 236 (1065)
Q Consensus 157 l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~ 236 (1065)
++.+||++..++.+ ..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+ .++++++++
T Consensus 126 l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~s 198 (242)
T PRK11124 126 LERLRLKPYADRFP-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE--TGITQVIVT 198 (242)
T ss_pred HHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEe
Confidence 99999987666554 46999999999999999999999999999999999999999999998864 256777799
Q ss_pred CCchHHHhhcccEEEecCCcEEEEcCcchH
Q 001507 237 QPAPEAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 237 ~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
|+.+++.+++|++++|++|++++.|+++++
T Consensus 199 h~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 199 HEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred CCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 999999999999999999999999987654
No 397
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=325.95 Aligned_cols=215 Identities=21% Similarity=0.314 Sum_probs=171.8
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~--~-~~~~G~i~i~g 763 (1065)
.+.++++++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYY-------------GEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 45666666544 33569999999999999999999999999999999999642 1 12689999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccCcccC
Q 001507 764 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGL 834 (1065)
Q Consensus 764 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~ 834 (1065)
.++.. ..+++.++|++|++.+++. ||+||+.+....+... ......+.+.++++.+++.+ ..+.
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~~~---- 178 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGIN--DKKQLEEIVEKSLRKAALWDEVSDRLDK---- 178 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCCC--cHHHHHHHHHHHHHHhCCccchhhHhhC----
Confidence 87532 1345679999999988875 9999999865432111 12233456778888888742 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe
Q 001507 835 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 914 (1065)
Q Consensus 835 ~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 914 (1065)
.+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 179 -~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 179 -NALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 2357999999999999999999999999999999999999999999999865 689999999986 5677899999998
Q ss_pred cCcEEEEeCCC
Q 001507 915 RGGELIYAGPL 925 (1065)
Q Consensus 915 ~gg~~~~~g~~ 925 (1065)
+|+++..|+.
T Consensus 256 -~G~i~~~g~~ 265 (286)
T PRK14275 256 -EGVLVEHAPT 265 (286)
T ss_pred -CCEEEEeCCH
Confidence 5899998875
No 398
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-36 Score=328.47 Aligned_cols=219 Identities=26% Similarity=0.357 Sum_probs=176.2
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++ ++.+|+|+||++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.+
T Consensus 14 i~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 14 LRNVSFRVP---GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred EeeEEEEEC---CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhhe
Confidence 345555443 246999999999999999999999999999999999998765 999999998764322 23569
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+|++|++.+++.+||.||+.++..... . ... ... ...+..++++++.+||
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~-~-~~~--------------~~~--------------~~~~~~~~~~l~~~~l 137 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWH-G-ALG--------------RFG--------------AADREKVEEAISLVGL 137 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCccccc-c-ccc--------------CCC--------------HHHHHHHHHHHHHcCC
Confidence 999999888888999999987531100 0 000 000 0012247788999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++..++.++ .|||||||||+|||||+.+|+|+||||||+|||+.++..+.+.|+++++. .+++|++++|+.+++
T Consensus 138 ~~~~~~~~~-----~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~-~~~tiii~sH~~~~i 211 (265)
T PRK10575 138 KPLAHRLVD-----SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQE-RGLTVIAVLHDINMA 211 (265)
T ss_pred HHHhcCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHH
Confidence 876666554 59999999999999999999999999999999999999999999998653 256677799999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
.++||++++|++|++++.|+.+++
T Consensus 212 ~~~~d~i~~l~~G~i~~~~~~~~~ 235 (265)
T PRK10575 212 ARYCDYLVALRGGEMIAQGTPAEL 235 (265)
T ss_pred HHhCCEEEEEECCeEEEecCHHHh
Confidence 999999999999999999987665
No 399
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=6.3e-36 Score=327.55 Aligned_cols=207 Identities=22% Similarity=0.267 Sum_probs=170.4
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEEEEccccc--cCC
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW--QVA 93 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~yv~Q~~~--~~~ 93 (1065)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999875 999999998765321 1346999999974 567
Q ss_pred CCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc-ccccccccC
Q 001507 94 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLVGD 172 (1065)
Q Consensus 94 ~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~vg~ 172 (1065)
.+||.|++.+......... .......++++++.+||. +..++.+
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~-- 147 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------------------------------PEQREKQIIETLRQVGLLPDHASYYP-- 147 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------------------------------HHHHHHHHHHHHHHcCCChHHHhcCc--
Confidence 8899999987543211000 000122377889999994 5555443
Q ss_pred cccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEe
Q 001507 173 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 252 (1065)
Q Consensus 173 ~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l 252 (1065)
..|||||||||+||+||+.+|+|++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++..+||++++|
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 148 ---HMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEK-QGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred ---hhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 469999999999999999999999999999999999999999999998753 3567777999999999999999999
Q ss_pred cCCcEEEEcCcchHH
Q 001507 253 SEGQIVYQGPRVSVL 267 (1065)
Q Consensus 253 ~~G~i~~~G~~~~~~ 267 (1065)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999877653
No 400
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-35 Score=279.89 Aligned_cols=200 Identities=25% Similarity=0.370 Sum_probs=171.8
Q ss_pred ccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-------CCceEEEEccc
Q 001507 16 RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQ 88 (1065)
Q Consensus 16 ~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-------~~~~~~yv~Q~ 88 (1065)
..+..||++|++.+++||.++|+|||||||||||-+|+|+-.|+ +|+|.+.|+++.... ..+.+|+|+|.
T Consensus 20 ~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQS 96 (228)
T COG4181 20 EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQS 96 (228)
T ss_pred CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEEe
Confidence 45688999999999999999999999999999999999998776 999999999876553 23679999999
Q ss_pred cccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccc
Q 001507 89 DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 168 (1065)
Q Consensus 89 ~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t 168 (1065)
..++|++|..||+...+.+++.... +......+.|+.+||.+-.+-
T Consensus 97 F~Lip~ltAlENV~lPleL~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl~H 142 (228)
T COG4181 97 FHLIPNLTALENVALPLELRGESSA----------------------------------DSRAGAKALLEAVGLGKRLTH 142 (228)
T ss_pred eeccccchhhhhccchhhhcCCccc----------------------------------cHHHHHHHHHHHhCccccccc
Confidence 9999999999999998877653211 112236778999999876543
Q ss_pred cccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhccc
Q 001507 169 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 248 (1065)
Q Consensus 169 ~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~ 248 (1065)
++.+|||||+|||+||||+...|+|||-||||-.||..+..+|.+++..+.++ .++|.+.++||.. +...|||
T Consensus 143 -----yP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD~~-LA~Rc~R 215 (228)
T COG4181 143 -----YPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHDPQ-LAARCDR 215 (228)
T ss_pred -----CccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCCHH-HHHhhhh
Confidence 35679999999999999999999999999999999999999999999999876 5778888999865 5567899
Q ss_pred EEEecCCcEEE
Q 001507 249 VILLSEGQIVY 259 (1065)
Q Consensus 249 v~~l~~G~i~~ 259 (1065)
.+-|.+|+++.
T Consensus 216 ~~r~~~G~l~~ 226 (228)
T COG4181 216 QLRLRSGRLVE 226 (228)
T ss_pred eeeeecceecc
Confidence 99999999864
No 401
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.8e-36 Score=340.56 Aligned_cols=210 Identities=29% Similarity=0.369 Sum_probs=177.4
Q ss_pred cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccC--CCC---CCCceEEEEcccc--
Q 001507 17 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGF--KEF---VPPRTSAYVSQQD-- 89 (1065)
Q Consensus 17 ~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~--~~~---~~~~~~~yv~Q~~-- 89 (1065)
....+++||||++++||+++|+|+||||||||.++|+|++.|. +|+|.++|.+. ... ..++.+-+++|+|
T Consensus 302 ~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~ 378 (539)
T COG1123 302 GEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYS 378 (539)
T ss_pred cceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCccc
Confidence 3467999999999999999999999999999999999999875 99999999872 111 1235678888886
Q ss_pred ccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccccccc
Q 001507 90 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 169 (1065)
Q Consensus 90 ~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~ 169 (1065)
.+.|.+||+++|......+.... ..+.++++.++++..||+..
T Consensus 379 SLnPr~tV~~~i~epL~~~~~~~---------------------------------~~~~~~rv~~ll~~VgL~~~---- 421 (539)
T COG1123 379 SLNPRMTVGDILAEPLRIHGGGS---------------------------------GAERRARVAELLELVGLPPE---- 421 (539)
T ss_pred ccCccccHHHHHHhHHhhhcccc---------------------------------hHHHHHHHHHHHHHcCCCHH----
Confidence 57899999999987665432211 01123358899999999852
Q ss_pred ccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccE
Q 001507 170 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 249 (1065)
Q Consensus 170 vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v 249 (1065)
..++++..|||||||||+|||||+.+|+++++|||||+||+.++.++.++|+++.++. +.+.++|+||...+..+||||
T Consensus 422 ~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~-g~t~lfISHDl~vV~~i~drv 500 (539)
T COG1123 422 FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEEL-GLTYLFISHDLAVVRYIADRV 500 (539)
T ss_pred HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHhhCceE
Confidence 3356778899999999999999999999999999999999999999999999998765 567777999999999999999
Q ss_pred EEecCCcEEEEcCcchHH
Q 001507 250 ILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 250 ~~l~~G~i~~~G~~~~~~ 267 (1065)
++|++|++++.||.+++.
T Consensus 501 ~vm~~G~iVE~G~~~~v~ 518 (539)
T COG1123 501 AVMYDGRIVEEGPTEKVF 518 (539)
T ss_pred EEEECCeEEEeCCHHHHh
Confidence 999999999999888774
No 402
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.1e-35 Score=309.10 Aligned_cols=179 Identities=25% Similarity=0.316 Sum_probs=150.6
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-----ccccceEEEEcCCCC-CC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HS 785 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~-~~ 785 (1065)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 4569999999999999999999999999999999999876 568999999987631 134567999999973 23
Q ss_pred CCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecC
Q 001507 786 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 865 (1065)
Q Consensus 786 ~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDE 865 (1065)
...|++||+.+..... ........++++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999998865322 1223334456788999999987666644 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCc
Q 001507 866 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPS 900 (1065)
Q Consensus 866 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 900 (1065)
||+|||+.++..+.+.|++++++|+|||++||+++
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999975
No 403
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=303.71 Aligned_cols=158 Identities=29% Similarity=0.445 Sum_probs=142.8
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCCCH
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (173)
T cd03230 13 KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTV 90 (173)
T ss_pred eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcH
Confidence 469999999999999999999999999999999999876 468999999987643 2345679999999988888999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
.||+. ||||||||++|||||+.+|++|+|||||+||
T Consensus 91 ~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~L 126 (173)
T cd03230 91 RENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGL 126 (173)
T ss_pred HHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCC
Confidence 99873 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 871 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
|+.++..+.+.|++++++|.|||++||+++ .+...+|++++|++ |+
T Consensus 127 D~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~-g~ 172 (173)
T cd03230 127 DPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNN-GR 172 (173)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeC-CC
Confidence 999999999999999877899999999986 56678999999985 44
No 404
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=318.88 Aligned_cols=207 Identities=25% Similarity=0.330 Sum_probs=165.1
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC--C-eeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
.+.+|+|+|++|++||++||+||||||||||+++|+|..++ . +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 16 ~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (251)
T PRK14251 16 NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPT 95 (251)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCc
Confidence 45799999999999999999999999999999999998641 1 358999999987532 234567999999988
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++ .|++||+.+....+.. ...+...+.++++++.+++........ ......||||||||++|||||+.+|++|+|
T Consensus 96 ~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qr~~laral~~~p~llll 171 (251)
T PRK14251 96 PFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNL-DRNAQAFSGGQQQRICIARALAVRPKVVLL 171 (251)
T ss_pred cCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHh-ccChhhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 876 7999999876432211 112223355778888888842110000 112358999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 172 DEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 230 (251)
T PRK14251 172 DEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM-NGDLIEAGPT 230 (251)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999854 799999999986 5677899999998 5799888874
No 405
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-36 Score=324.77 Aligned_cols=221 Identities=21% Similarity=0.271 Sum_probs=174.4
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcC--CCCceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~--~~~~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|++. |..+.+|+|.++|.++... ..+
T Consensus 8 ~nl~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~ 84 (252)
T PRK14256 8 EQLNVHFG---KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIR 84 (252)
T ss_pred EEEEEEeC---CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhh
Confidence 45555543 2469999999999999999999999999999999999985 3213589999999886431 234
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++.+||+||+.++....+. .+. .+.+..++++++.
T Consensus 85 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~---~~~------------------------------~~~~~~~~~~l~~ 131 (252)
T PRK14256 85 RRVGMVFQKPNPFPAMSIYDNVIAGYKLNGR---VNR------------------------------SEADEIVESSLKR 131 (252)
T ss_pred ccEEEEecCCCCCCcCcHHHHHHhHHHhcCC---CCH------------------------------HHHHHHHHHHHHH
Confidence 6799999999989989999999875432110 000 0011236778888
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+|+.+...... +..+..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++ + ++|++++|+.
T Consensus 132 ~~l~~~~~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~ 207 (252)
T PRK14256 132 VALWDEVKDRL-KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNM 207 (252)
T ss_pred cCCchhhhHHh-hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCH
Confidence 88864211111 123457999999999999999999999999999999999999999999999863 3 5777799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++.++||++++|++|++++.|+.+++.
T Consensus 208 ~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 208 QQAARVSDYTAFFYMGDLVECGETKKIF 235 (252)
T ss_pred HHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999987763
No 406
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-35 Score=354.78 Aligned_cols=211 Identities=22% Similarity=0.313 Sum_probs=178.3
Q ss_pred EEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 001507 688 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR 767 (1065)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~ 767 (1065)
+..+|+++.+ +++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 12 l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 76 (510)
T PRK15439 12 LCARSISKQY-------------SGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPCA 76 (510)
T ss_pred EEEEeEEEEe-------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5666666544 34579999999999999999999999999999999999876 56899999998764
Q ss_pred cc---c-ccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHH
Q 001507 768 QE---T-FARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTE 843 (1065)
Q Consensus 768 ~~---~-~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgG 843 (1065)
.. . .++.+||++|++.+++.+||.||+.|.... .....++++++++.+++.+..+..+ ..||||
T Consensus 77 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 144 (510)
T PRK15439 77 RLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSA-----GSLEVA 144 (510)
T ss_pred CCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCCh-----hhCCHH
Confidence 21 1 234689999999999999999999875311 1233456788999999987766654 579999
Q ss_pred HHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 844 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 844 qrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
|||||+|||+|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ .+...||++++|. +|++++.|
T Consensus 145 ~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~-~G~i~~~g 222 (510)
T PRK15439 145 DRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMR-DGTIALSG 222 (510)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEec
Confidence 999999999999999999999999999999999999999999878999999999986 5678899999998 47999998
Q ss_pred CCCC
Q 001507 924 PLGS 927 (1065)
Q Consensus 924 ~~~~ 927 (1065)
+..+
T Consensus 223 ~~~~ 226 (510)
T PRK15439 223 KTAD 226 (510)
T ss_pred ChHH
Confidence 7643
No 407
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=323.31 Aligned_cols=204 Identities=24% Similarity=0.409 Sum_probs=164.8
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCC--CCCCH
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGLTV 790 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~--~~ltv 790 (1065)
+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.....++.++|++|++.+. ...++
T Consensus 20 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~i~~v~q~~~~~~~~~~~~ 97 (272)
T PRK15056 20 HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPTRQALQKNLVAYVPQSEEVDWSFPVLV 97 (272)
T ss_pred cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEhHHhhccceEEEeccccccccCCCcch
Confidence 579999999999999999999999999999999999876 56899999998764332334699999997652 23478
Q ss_pred HHHHHHHhhccC-CCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 791 LESLLFSAWLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 791 ~e~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
+|++.++..... ..........+.++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||+|
T Consensus 98 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~~ 172 (272)
T PRK15056 98 EDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGGQKKRVFLARAIAQQGQVILLDEPFTG 172 (272)
T ss_pred hhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 888865321000 000111223445778899999987766644 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 870 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|+..
T Consensus 173 LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g~~~ 226 (272)
T PRK15056 173 VDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASGPTE 226 (272)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 9999999999999999877999999999986 577889998766 4 7999988764
No 408
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=331.16 Aligned_cols=219 Identities=25% Similarity=0.343 Sum_probs=175.7
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.+++. .+.+|+|+||+|++||+++|+||||||||||+++|+|.+.|....+|+|.++|.++.... .++.++
T Consensus 9 ~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig 87 (282)
T PRK13640 9 KHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVG 87 (282)
T ss_pred EEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheE
Confidence 4555554321 245999999999999999999999999999999999999775212399999999875432 235799
Q ss_pred EEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 84 YVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 84 yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
|++|++. .++..||+||+.|.....+.. ..+..++++++++.+||
T Consensus 88 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L 133 (282)
T PRK13640 88 IVFQNPDNQFVGATVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGM 133 (282)
T ss_pred EEEECHHHhhccCCHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCC
Confidence 9999974 577889999998754321100 00112347788999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
.+..++.+ +.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++
T Consensus 134 ~~~~~~~~-----~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~ 207 (282)
T PRK13640 134 LDYIDSEP-----ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKK-NNLTVISITHDIDEA 207 (282)
T ss_pred hhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH
Confidence 87666554 579999999999999999999999999999999999999999999998753 356777789999988
Q ss_pred HhhcccEEEecCCcEEEEcCcchHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
..||++++|++|++++.|+++++.
T Consensus 208 -~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 208 -NMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred -HhCCEEEEEECCEEEEeCCHHHHh
Confidence 479999999999999999987764
No 409
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-36 Score=326.07 Aligned_cols=220 Identities=24% Similarity=0.321 Sum_probs=172.4
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcC--CCCceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~--~~~~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.+++ +.+|+|+||++++||+++|+|||||||||||++|+|.+. +..+.+|+|.++|+++... ..
T Consensus 9 ~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 85 (253)
T PRK14242 9 ARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVEL 85 (253)
T ss_pred EeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHH
Confidence 3455555532 469999999999999999999999999999999999864 1113599999999877431 12
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++ .||+||+.++....+... . ...+..++++++
T Consensus 86 ~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~ 131 (253)
T PRK14242 86 RRRVGMVFQKPNPFP-KSIFENVAYGLRVNGVKD--K-------------------------------AYLAERVERSLR 131 (253)
T ss_pred hhcEEEEecCCCCCc-CcHHHHHHHHHHHcCCCC--H-------------------------------HHHHHHHHHHHH
Confidence 457999999988787 599999988643221100 0 001123667788
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||.+...+.. ++.++.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|++++|+
T Consensus 132 ~~~l~~~~~~~~-~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii~tH~ 207 (253)
T PRK14242 132 HAALWDEVKDRL-HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA---RYTIIIVTHN 207 (253)
T ss_pred HcCCchhhhHHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCeEEEEEec
Confidence 888854221111 234567999999999999999999999999999999999999999999998842 3677779999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
.+++.++||++++|++|++++.|+++++
T Consensus 208 ~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 208 MQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999987765
No 410
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=9.1e-36 Score=318.08 Aligned_cols=197 Identities=22% Similarity=0.347 Sum_probs=161.2
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~l 788 (1065)
++.+++|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++ .
T Consensus 19 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~-~ 95 (225)
T PRK10247 19 DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDISTLKPEIYRQQVSYCAQTPTLFG-D 95 (225)
T ss_pred CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEcCcCCHHHHHhccEEEeccccccc-c
Confidence 4579999999999999999999999999999999999876 568999999986532 234567999999988876 4
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
|++||+.+....+.. . ...+.++++++.+++. ...+.. +..||||||||++|||+|+.+|++|+|||||
T Consensus 96 tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 165 (225)
T PRK10247 96 TVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSGGEKQRISLIRNLQFMPKVLLLDEIT 165 (225)
T ss_pred cHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999875433211 1 1124567899999985 344443 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 868 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
+|||+.++..+.+.|+++.++ |.|||++||+++ .+ ..+|++++|.+.+..+.+|
T Consensus 166 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~~~ 220 (225)
T PRK10247 166 SALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQEA 220 (225)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHhhh
Confidence 999999999999999998754 899999999986 34 5699999996444444444
No 411
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-35 Score=320.44 Aligned_cols=207 Identities=26% Similarity=0.283 Sum_probs=166.1
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..... +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 18 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 97 (253)
T PRK14261 18 EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPN 97 (253)
T ss_pred CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCc
Confidence 457999999999999999999999999999999999975321 247999999987642 234567999999998
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++. ||+||+.|....+.. ......++.++++++.+++.+...... ......||||||||++|||+|+.+|++++|
T Consensus 98 ~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~lllL 173 (253)
T PRK14261 98 PFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRL-HDSALSLSGGQQQRLCIARTLAVNPEVILM 173 (253)
T ss_pred cCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHh-hcChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8875 999999987544321 122233456778888888743111111 112357999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 174 DEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 232 (253)
T PRK14261 174 DEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY-LGKLIEFDKT 232 (253)
T ss_pred eCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE-CCEEEEcCCH
Confidence 999999999999999999999875 689999999986 4667899999998 5899988875
No 412
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=319.31 Aligned_cols=204 Identities=27% Similarity=0.411 Sum_probs=172.3
Q ss_pred cccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEEEccccccCCCCCHHH
Q 001507 21 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRE 99 (1065)
Q Consensus 21 iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e 99 (1065)
+|+|+|++|++||+++|+||||||||||+++|+|.+.|. +|+|.++|.++.... .++.++|++|++.+++.+|+.|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999998775 999999998775432 2457999999999898999999
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccccCc
Q 001507 100 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 179 (1065)
Q Consensus 100 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LS 179 (1065)
|+.++....+. .. ......+.++++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~--~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKV--DK--------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCC--CH--------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 99876432110 00 001123677889999987776655 4699
Q ss_pred hhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEEE
Q 001507 180 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 259 (1065)
Q Consensus 180 GGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~ 259 (1065)
||||||++||||++.+|++++|||||+|||+.++.++++.|++++... ++++++++|+.+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEF-GVTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999986532 5677779999999999999999999999999
Q ss_pred EcCcchHH
Q 001507 260 QGPRVSVL 267 (1065)
Q Consensus 260 ~G~~~~~~ 267 (1065)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99877654
No 413
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=317.45 Aligned_cols=215 Identities=25% Similarity=0.333 Sum_probs=177.6
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYV 85 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~yv 85 (1065)
+++++.++. +.+++|+|+++++|++++|+|+||||||||+++|+|.++|. +|+|.++|.++.... .++.++|+
T Consensus 4 ~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~ 77 (232)
T cd03300 4 ENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTV 77 (232)
T ss_pred EeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEE
Confidence 344444432 46999999999999999999999999999999999999875 899999998775432 24579999
Q ss_pred ccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccc
Q 001507 86 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 165 (1065)
Q Consensus 86 ~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 165 (1065)
+|++.+++.+|++||+.++....+.. . ...+..++.+++.+||.+.
T Consensus 78 ~q~~~~~~~~t~~~nl~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~ 123 (232)
T cd03300 78 FQNYALFPHLTVFENIAFGLRLKKLP--K--------------------------------AEIKERVAEALDLVQLEGY 123 (232)
T ss_pred ecccccCCCCcHHHHHHHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchh
Confidence 99999888899999998764432100 0 0012236788999999877
Q ss_pred ccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhh
Q 001507 166 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 245 (1065)
Q Consensus 166 ~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~ 245 (1065)
.++.+ ..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++++++ .+.+|++++|+.+++.++
T Consensus 124 ~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sh~~~~~~~~ 197 (232)
T cd03300 124 ANRKP-----SQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKE-LGITFVFVTHDQEEALTM 197 (232)
T ss_pred hcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHh
Confidence 76554 469999999999999999999999999999999999999999999998753 256777789999999999
Q ss_pred cccEEEecCCcEEEEcCcchHH
Q 001507 246 FDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 246 ~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
||++++|++|++++.|+..++.
T Consensus 198 ~d~i~~l~~G~~~~~~~~~~~~ 219 (232)
T cd03300 198 SDRIAVMNKGKIQQIGTPEEIY 219 (232)
T ss_pred cCEEEEEECCEEEecCCHHHHH
Confidence 9999999999999999876653
No 414
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=323.64 Aligned_cols=218 Identities=20% Similarity=0.279 Sum_probs=171.1
Q ss_pred EEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEECCc
Q 001507 688 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGY 764 (1065)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~--~-~~~~G~i~i~g~ 764 (1065)
+.++|+++.+ +++.+|+|+||++++||+++|+||||||||||+++|+|... + .+.+|+|.++|.
T Consensus 22 l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~ 88 (268)
T PRK14248 22 LEVKDLSIYY-------------GEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGL 88 (268)
T ss_pred EEEEEEEEEe-------------CCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCE
Confidence 5667776544 23579999999999999999999999999999999999642 1 146899999998
Q ss_pred cCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCC
Q 001507 765 PKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGING 839 (1065)
Q Consensus 765 ~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~ 839 (1065)
++.. ..+++.++|++|++.+++. |++||+.+...... .......++.++++++.+++........ ...+..
T Consensus 89 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~ 164 (268)
T PRK14248 89 NILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRL-HSSALS 164 (268)
T ss_pred EcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHH-hcCccc
Confidence 7642 1345679999999888875 99999987643221 1112223445677888888742110111 112357
Q ss_pred CCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEE
Q 001507 840 LSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 919 (1065)
Q Consensus 840 lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~ 919 (1065)
||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|. +|++
T Consensus 165 LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~-~G~i 241 (268)
T PRK14248 165 LSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL-NGDL 241 (268)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE-CCEE
Confidence 999999999999999999999999999999999999999999999864 689999999986 5778899999998 5899
Q ss_pred EEeCCC
Q 001507 920 IYAGPL 925 (1065)
Q Consensus 920 ~~~g~~ 925 (1065)
++.|+.
T Consensus 242 ~~~~~~ 247 (268)
T PRK14248 242 VEYDQT 247 (268)
T ss_pred EEeCCH
Confidence 998874
No 415
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=318.58 Aligned_cols=202 Identities=21% Similarity=0.350 Sum_probs=169.5
Q ss_pred cCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEEEccccccCCCCCHHHHH
Q 001507 23 DDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRETL 101 (1065)
Q Consensus 23 ~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~yv~Q~~~~~~~lTv~e~l 101 (1065)
.|+||++++|++++|+||||||||||+++|+|.+.|. +|+|.++|.++.... .++.++|++|++.+++.+|+.||+
T Consensus 16 ~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l 92 (232)
T PRK10771 16 MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNI 92 (232)
T ss_pred ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHH
Confidence 3899999999999999999999999999999998775 999999998765432 235799999999889989999999
Q ss_pred HHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCcccccCchh
Q 001507 102 DFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGG 181 (1065)
Q Consensus 102 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSGG 181 (1065)
.++.... .. .. ...+..++++++.+||++..++.+ +.||||
T Consensus 93 ~~~~~~~-~~--~~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 133 (232)
T PRK10771 93 GLGLNPG-LK--LN-------------------------------AAQREKLHAIARQMGIEDLLARLP-----GQLSGG 133 (232)
T ss_pred hcccccc-cC--CC-------------------------------HHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHH
Confidence 8753210 00 00 001223788899999987776655 469999
Q ss_pred hhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEecCCcEEEEc
Q 001507 182 QKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 261 (1065)
Q Consensus 182 qkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G 261 (1065)
||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+.+++.+++|++++|++|++++.|
T Consensus 134 ~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g 212 (232)
T PRK10771 134 QRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQE-RQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDG 212 (232)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999998653 2567777999999999999999999999999999
Q ss_pred CcchHH
Q 001507 262 PRVSVL 267 (1065)
Q Consensus 262 ~~~~~~ 267 (1065)
+.+++.
T Consensus 213 ~~~~~~ 218 (232)
T PRK10771 213 PTDELL 218 (232)
T ss_pred CHHHHH
Confidence 887664
No 416
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.4e-35 Score=352.96 Aligned_cols=210 Identities=22% Similarity=0.370 Sum_probs=173.6
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc----cccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+||||++++||++||+||||||||||+++|+|..++++.+|+|.++|.++... ..++.+|||+|++.+++
T Consensus 12 ~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (500)
T TIGR02633 12 GGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP 91 (500)
T ss_pred CCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC
Confidence 34679999999999999999999999999999999999876323589999999876431 12456999999998899
Q ss_pred CCCHHHHHHHHhhccCCC-CCCHHHHHHHHHHHHHHcCCCccc-cCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeec
Q 001507 787 GLTVLESLLFSAWLRLPS-EIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 864 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lD 864 (1065)
.+||.||+.+........ ....+...++++++++.+++.+.. +.. +..|||||||||+|||||+.+|++||||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~iA~al~~~p~lllLD 166 (500)
T TIGR02633 92 ELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYGGGQQQLVEIAKALNKQARLLILD 166 (500)
T ss_pred CCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEEe
Confidence 999999998864322111 112233445678899999997654 232 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 865 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 865 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
|||+|||+.++..+.+.|++++++|+|||++||+++ .+...||++++|.+ |++++.|+...
T Consensus 167 EPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 227 (500)
T TIGR02633 167 EPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVATKDMST 227 (500)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEeeecCccc
Confidence 999999999999999999999878999999999986 57778999999985 78998887654
No 417
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=352.54 Aligned_cols=208 Identities=25% Similarity=0.333 Sum_probs=174.4
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|+++.. ..+++.+||++|++.+++
T Consensus 9 ~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 86 (491)
T PRK10982 9 PGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVL 86 (491)
T ss_pred CCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEeccccccc
Confidence 34679999999999999999999999999999999999876 568999999987642 123467999999998889
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+||+||+.+................++++++++.+++.+..+..+ ..|||||||||+|||||+.+|++||||||
T Consensus 87 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEP 161 (491)
T PRK10982 87 QRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEP 161 (491)
T ss_pred CCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 9999999987532110100122333456889999999987666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
|+|||+.++..+.+.|++++++|+|||++||+++ ++...||++++|. +|+++..|+...
T Consensus 162 t~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~~~ 220 (491)
T PRK10982 162 TSSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILR-DGQWIATQPLAG 220 (491)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEeecChhh
Confidence 9999999999999999999878999999999986 5677899999998 589999988654
No 418
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-36 Score=328.63 Aligned_cols=218 Identities=20% Similarity=0.275 Sum_probs=176.9
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.+++.....+|+|+|+++++||+++|+|+||||||||+++|+|.++|. +|+|.++|.++.... .++.+
T Consensus 7 ~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 7 VENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred EEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcce
Confidence 455666654333346999999999999999999999999999999999999775 999999998875422 24579
Q ss_pred EEEccccc-cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 83 AYVSQQDW-QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 83 ~yv~Q~~~-~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
+|++|++. .++..||.||+.++....+.. . ......++.+++.+|
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~ 129 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVN 129 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCC
Confidence 99999974 577789999998754321100 0 001123678899999
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
|.+..++.+ ..||||||||++|||||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|++++|+.++
T Consensus 130 l~~~~~~~~-----~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tiil~sH~~~~ 203 (277)
T PRK13642 130 MLDFKTREP-----ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEK-YQLTVLSITHDLDE 203 (277)
T ss_pred CHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHH
Confidence 987666544 469999999999999999999999999999999999999999999988753 35677779999999
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+. .+|++++|++|++++.|+++++.
T Consensus 204 ~~-~~d~i~~l~~G~i~~~g~~~~~~ 228 (277)
T PRK13642 204 AA-SSDRILVMKAGEIIKEAAPSELF 228 (277)
T ss_pred HH-hCCEEEEEECCEEEEeCCHHHHh
Confidence 86 59999999999999999987764
No 419
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3e-35 Score=322.07 Aligned_cols=205 Identities=25% Similarity=0.342 Sum_probs=169.9
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc------ccccceEEEEcCCC--C
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--I 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~~v~q~~--~ 783 (1065)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++ .
T Consensus 24 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 24 HQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred ceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 3679999999999999999999999999999999999876 568999999987532 12456799999997 3
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
+.+..|+.|++.+..... .........+.++++++.+++. ...+.. ...||||||||++|||+|+.+|++||
T Consensus 102 ~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~Ge~qrl~laral~~~p~lll 174 (268)
T PRK10419 102 VNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PPQLSGGQLQRVCLARALAVEPKLLI 174 (268)
T ss_pred cCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----CccCChHHHHHHHHHHHHhcCCCEEE
Confidence 567789999987643211 1122334455688999999986 455543 35799999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 927 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~~ 927 (1065)
|||||+|||+.++..+.+.|++++++ |.|||++||+++ .+.+.+|++++|. +|++++.|+..+
T Consensus 175 LDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~~ 238 (268)
T PRK10419 175 LDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMD-NGQIVETQPVGD 238 (268)
T ss_pred EeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEE-CCEEeeeCChhh
Confidence 99999999999999999999998765 899999999986 5667899999998 589999987643
No 420
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.1e-35 Score=318.36 Aligned_cols=197 Identities=25% Similarity=0.383 Sum_probs=167.2
Q ss_pred EeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCCHH
Q 001507 715 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVL 791 (1065)
Q Consensus 715 il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv~ 791 (1065)
+|+|+||++++||+++|+||||||||||+++|+|..+ . +|+|.++|.++.. ..+++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~--~-~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP--G-SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--C-CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7899999999999999999999999999999999874 3 7999999987642 22345689999998888889999
Q ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHh-------CCCceeec
Q 001507 792 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA-------NPSIVFMD 864 (1065)
Q Consensus 792 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~-------~p~il~lD 864 (1065)
||+.+..... .......++++++++.+++.+..+... ..||||||||++|||||+. +|++|+||
T Consensus 88 ~nl~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPDK----TRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCccC----CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 9998753211 122233456789999999977666543 5799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 865 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 865 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||+|||+.++..+.+.|++++++|.|||++||+++ ++...+|++++|. +|++++.|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLK-QGKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 999999999999999999999877999999999986 5778899999998 5899998875
No 421
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=325.45 Aligned_cols=220 Identities=25% Similarity=0.353 Sum_probs=177.4
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++ +..+|+|+||++++|++++|+|||||||||||++|+|.++++ +|+|.++|.++.... .++.+
T Consensus 10 i~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 10 GEQLTLGYG---KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred EEEEEEEEC---CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhhe
Confidence 345555553 246999999999999999999999999999999999998775 999999998765432 23469
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+|++|++.+++..||+||+.++..... . .... . .+.....++++++.+||
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~-~-~~~~--------------~--------------~~~~~~~~~~~l~~~~l 133 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQ-P-LFTR--------------W--------------RKEDEEAVTKAMQATGI 133 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCccccc-c-cccC--------------C--------------CHHHHHHHHHHHHHcCC
Confidence 999999988888999999987421000 0 0000 0 00012247788999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
.+..++.+ +.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++
T Consensus 134 ~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~-~~~tiii~tH~~~~~ 207 (265)
T PRK10253 134 THLADQSV-----DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNRE-KGYTLAAVLHDLNQA 207 (265)
T ss_pred HHHhcCCc-----ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHH
Confidence 87666544 569999999999999999999999999999999999999999999998653 356777799999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.++||++++|++|++++.|+++++.
T Consensus 208 ~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 208 CRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999887654
No 422
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-35 Score=332.14 Aligned_cols=224 Identities=25% Similarity=0.375 Sum_probs=187.9
Q ss_pred ccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEc
Q 001507 704 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCE 779 (1065)
Q Consensus 704 ~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~ 779 (1065)
++.++.++..++|+||||++++||++||+|.||||||||+|+|+|..+ +++|+|.+||++... .....-|+.|.
T Consensus 12 ~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~~~~sp~~A~~~GI~~V~ 89 (500)
T COG1129 12 RGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPVAFSSPRDALAAGIATVH 89 (500)
T ss_pred ecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEccCCCHHHHHhCCcEEEe
Confidence 334445677899999999999999999999999999999999999877 679999999987642 23445689999
Q ss_pred CCCCCCCCCCHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCC
Q 001507 780 QNDIHSPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 858 (1065)
Q Consensus 780 q~~~~~~~ltv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p 858 (1065)
|+..+.|++||.||+.++...+.+ .-.......++..++++.+++....+..+ .+||+||||.|.|||||..++
T Consensus 90 QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v-----~~LsiaqrQ~VeIArAl~~~a 164 (500)
T COG1129 90 QELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLV-----GDLSIAQRQMVEIARALSFDA 164 (500)
T ss_pred echhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999876543321 22445666677889999999863355544 579999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC-CC-chhHHHHHH
Q 001507 859 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL-GS-KSCELIKYF 936 (1065)
Q Consensus 859 ~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~-~~-~~~~~~~~~ 936 (1065)
+||+||||||.|+......+.+.+++++++|.+||++||+++ ++++.|||+.||.+ |+++...+. .+ ..++++...
T Consensus 165 rllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~~~~~~~~~~~~~lv~~M 242 (500)
T COG1129 165 RVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVGTRPTAAETSEDELVRLM 242 (500)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEeeecccccCCCHHHHHHHh
Confidence 999999999999999999999999999999999999999997 89999999999985 788888883 43 334455443
No 423
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=8.7e-36 Score=321.66 Aligned_cols=196 Identities=26% Similarity=0.414 Sum_probs=154.7
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~lt 789 (1065)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 469999999999999999999999999999999999876 568999999987532 234567999999987764 69
Q ss_pred HHHHHHHHhhccCCCCCCHHHHH-----HHHHHHHHHc--CCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 790 VLESLLFSAWLRLPSEIELETQR-----AFVEEVMELV--ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l--~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
|.||+.+... ........ ...++.++.+ ++....+. .+..|||||||||+|||||+.+|++|+
T Consensus 92 v~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-----~~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGE-----QGAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhc-----CCCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999986421 11111100 0112223332 22222222 246899999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||||+|||+.++..+.+.|++++ +|+|||++||+++ .+ ..+|++++|. +|++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~-~G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVME-KGRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEE-CCEEEEEcCH
Confidence 999999999999999999999986 4899999999986 34 5699999998 5899998875
No 424
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=5e-35 Score=318.78 Aligned_cols=209 Identities=24% Similarity=0.323 Sum_probs=166.2
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccc-eEEEEcCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFAR-ISGYCEQNDIHSPG 787 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~-~~~~v~q~~~~~~~ 787 (1065)
++.+|+|+||++++||++||+||||||||||+++|+|.....+.+|+|.++|.++.. ...++ .++|++|++.+++.
T Consensus 19 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~q~~~~~~~ 98 (252)
T CHL00131 19 ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLGIFLAFQYPIEIPG 98 (252)
T ss_pred CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheeeEEEEecccccccc
Confidence 356999999999999999999999999999999999973111568999999987643 12222 47899999999999
Q ss_pred CCHHHHHHHHhhccCC----CCCCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 788 LTVLESLLFSAWLRLP----SEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
+|+.+++.+....... ......+..++++++++.+++. ...+.... ..|||||||||+|||||+.+|+||+
T Consensus 99 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LSgG~~qrv~la~al~~~p~lll 174 (252)
T CHL00131 99 VSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN----EGFSGGEKKRNEILQMALLDSELAI 174 (252)
T ss_pred ccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----cCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999875432110 0111222335677888999886 34444321 2599999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHh-cCeEEEEecCcEEEEeCCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|. +|++++.|+++
T Consensus 175 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~-~G~i~~~~~~~ 237 (252)
T CHL00131 175 LDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQ-NGKIIKTGDAE 237 (252)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEe-CCEEEEecChh
Confidence 99999999999999999999999877999999999976 34444 79999997 58999998763
No 425
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=276.81 Aligned_cols=207 Identities=26% Similarity=0.360 Sum_probs=176.0
Q ss_pred ccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC------c---ccccceEEEE
Q 001507 708 VLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR------Q---ETFARISGYC 778 (1065)
Q Consensus 708 ~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~------~---~~~~~~~~~v 778 (1065)
..++..++|.||+++.+.||.+.++||||||||||++.|.-+.. +.+|+..|-|...+ . ..+|+.+|+|
T Consensus 10 ~~yg~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~--p~sg~l~ia~~~fd~s~~~~~k~i~~lr~~vgmv 87 (242)
T COG4161 10 CFYGAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFDFSKTPSDKAIRDLRRNVGMV 87 (242)
T ss_pred cccccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhC--CCCCeEEecccccccccCccHHHHHHHHHhhhhh
Confidence 34567789999999999999999999999999999999986655 46899888775321 1 2467789999
Q ss_pred cCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCC
Q 001507 779 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 858 (1065)
Q Consensus 779 ~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p 858 (1065)
+|...++|.+||.||+.-+.. +. ...++++.+.+..++++.+.|.+.+|+.. -.|||||+|||+|||||+.+|
T Consensus 88 fqqy~lwphltv~enlieap~-kv-~gl~~~qa~~~a~ellkrlrl~~~adr~p-----lhlsggqqqrvaiaralmmkp 160 (242)
T COG4161 88 FQQYNLWPHLTVQENLIEAPC-RV-LGLSKDQALARAEKLLKRLRLKPYADRYP-----LHLSGGQQQRVAIARALMMEP 160 (242)
T ss_pred hhhhccCchhHHHHHHHhhhH-HH-hCCCHHHHHHHHHHHHHHhccccccccCc-----eecccchhhhHHHHHHHhcCC
Confidence 999999999999999975432 21 23455666777889999999999999754 369999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 859 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 859 ~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
++|++||||+.|||+-..+++++|++++..|.|=+++||..+. ....+.+++.|. .|+++..|+.
T Consensus 161 qvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~v-a~k~as~vvyme-~g~ive~g~a 225 (242)
T COG4161 161 QVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEV-ARKTASRVVYME-NGHIVEQGDA 225 (242)
T ss_pred cEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhH-HHhhhhheEeee-cCeeEeecch
Confidence 9999999999999999999999999999999999999998763 456689999998 5899999974
No 426
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=323.40 Aligned_cols=220 Identities=20% Similarity=0.272 Sum_probs=172.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcC--CCCceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~--~~~~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +..+.+|+|.++|.++... ..+
T Consensus 7 ~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (250)
T PRK14245 7 RDVNFWYG---DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELR 83 (250)
T ss_pred EEEEEEEC---CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHh
Confidence 44555443 2469999999999999999999999999999999999732 2112489999999887532 123
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++ .||+||+.++....+... . ...+..++++++.
T Consensus 84 ~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~ 129 (250)
T PRK14245 84 KNVGMVFQRPNPFP-KSIFENVAYGLRVNGVKD--N-------------------------------AFIRQRVEETLKG 129 (250)
T ss_pred hheEEEecCCccCc-ccHHHHHHHHHHHcCCCc--H-------------------------------HHHHHHHHHHHHH
Confidence 56999999988776 699999987643221000 0 0011236778888
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+||.+...+.. +..+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++. . +.+|++++|+.
T Consensus 130 ~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~--~~tiiivtH~~ 205 (250)
T PRK14245 130 AALWDEVKDKL-KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-K--DYTIVIVTHNM 205 (250)
T ss_pred cCCCcchhhhh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c--CCeEEEEeCCH
Confidence 99864321111 23355799999999999999999999999999999999999999999999984 2 36677799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++.++||++++|++|++++.|+++++.
T Consensus 206 ~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 206 QQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999988774
No 427
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-35 Score=351.98 Aligned_cols=205 Identities=27% Similarity=0.342 Sum_probs=171.5
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~~~~~ 786 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++
T Consensus 15 ~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~ 92 (501)
T PRK11288 15 PGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEMRFASTTAALAAGVAIIYQELHLVP 92 (501)
T ss_pred CCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHhCCEEEEEechhccC
Confidence 34579999999999999999999999999999999999876 568999999987642 124567999999998999
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+||.||+.+.............+..++++++++.+++.+..+..+ ..|||||||||+|||+|+.+|+|||||||
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDEP 167 (501)
T PRK11288 93 EMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSIGQRQMVEIAKALARNARVIAFDEP 167 (501)
T ss_pred CCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 9999999988532111111123344566889999999976655543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCC
Q 001507 867 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 924 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~ 924 (1065)
|+|||+.++..+.+.|++++++|+|||++||+++ ++...||++++|.+ |+++..++
T Consensus 168 t~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~ 223 (501)
T PRK11288 168 TSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVATFD 223 (501)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecC
Confidence 9999999999999999999877999999999986 56788999999985 78887665
No 428
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=322.87 Aligned_cols=222 Identities=23% Similarity=0.340 Sum_probs=173.8
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC--ceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~--~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.++. ..+|+|+||++++||+++|+|||||||||||++|+|.+.|.+ +.+|+|.++|.++... ..
T Consensus 7 i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~ 83 (258)
T PRK14241 7 VKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAV 83 (258)
T ss_pred EeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHH
Confidence 3455555432 469999999999999999999999999999999999986421 2599999999876321 22
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++.+||+||+.++....+... . ...++.++++++
T Consensus 84 ~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~ 130 (258)
T PRK14241 84 RRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRN--K-------------------------------KDLDELVEKSLR 130 (258)
T ss_pred hcceEEEccccccCCCCcHHHHHHHHHHhcCCCC--H-------------------------------HHHHHHHHHHHH
Confidence 4579999999988999999999987643221000 0 001223677888
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||........ +..+.+|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|++++|+
T Consensus 131 ~~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~ 206 (258)
T PRK14241 131 GANLWNEVKDRL-DKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHN 206 (258)
T ss_pred HcCCchhhhhHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecC
Confidence 888842111111 233457999999999999999999999999999999999999999999998853 3 577779999
Q ss_pred chHHHhhcccEEEec------CCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLS------EGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~------~G~i~~~G~~~~~~ 267 (1065)
.+++.+++|++++|+ +|++++.|+++++.
T Consensus 207 ~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 207 MQQAARVSDQTAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred HHHHHHhCCEEEEEecccCCCCceEEecCCHHHHH
Confidence 999999999999996 79999999887763
No 429
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-35 Score=318.26 Aligned_cols=207 Identities=22% Similarity=0.292 Sum_probs=164.1
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||++++||++||+||||||||||+++|+|..+ + .+.+|+|.++|.++.. ...++.++|++|++.
T Consensus 17 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (252)
T PRK14255 17 KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPN 96 (252)
T ss_pred CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCc
Confidence 4579999999999999999999999999999999999753 1 1248999999987632 234567999999988
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++ .|++||+.+....+... ..+...+.+.+.++.+++........ ...+..||||||||++|||+|+.+|++|+|
T Consensus 97 ~~~-~tv~~nl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~i~~~~-~~~~~~LS~Gq~qrv~laral~~~p~llll 172 (252)
T PRK14255 97 PFP-FSIYENVIYGLRLAGVK--DKAVLDEAVETSLKQAAIWDEVKDHL-HESALSLSGGQQQRVCIARVLAVKPDVILL 172 (252)
T ss_pred cCC-CcHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHHcCCccchhhHH-hcCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 887 69999998865433211 12222345667777777642111111 112358999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.+|++++|+ +|+++..|++
T Consensus 173 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 231 (252)
T PRK14255 173 DEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL-TGNLIEFADT 231 (252)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999865 589999999986 5778899999998 5899988864
No 430
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=324.96 Aligned_cols=221 Identities=21% Similarity=0.309 Sum_probs=173.2
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++ +..+|+|+|++|++|++++|+|||||||||||++|+|.+.+. .+.+|+|.++|.++... ..+
T Consensus 23 ~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~ 99 (267)
T PRK14235 23 RDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELR 99 (267)
T ss_pred EeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHh
Confidence 44555543 246999999999999999999999999999999999998641 13599999999887531 124
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++. ||.||+.|+...++..... ......++++++.
T Consensus 100 ~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~ 146 (267)
T PRK14235 100 ARVGMVFQKPNPFPK-SIYENVAYGPRIHGLARSK--------------------------------AELDEIVETSLRK 146 (267)
T ss_pred hceEEEecCCCCCCC-cHHHHHHHHHHhcccccch--------------------------------HHHHHHHHHHHHH
Confidence 579999999887874 9999998865322110000 0011236778888
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+||.+...... ++.++.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ +.+|++++|+.
T Consensus 147 ~~l~~~~~~~~-~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~---~~tiiivtH~~ 222 (267)
T PRK14235 147 AGLWEEVKDRL-HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ---NYTIVIVTHSM 222 (267)
T ss_pred cCCchhhhHHh-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc---CCeEEEEEcCH
Confidence 99864211111 223457999999999999999999999999999999999999999999998853 35777799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++..+||++++|++|++++.|+.+++.
T Consensus 223 ~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 223 QQAARVSQRTAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred HHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999877663
No 431
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-36 Score=292.19 Aligned_cols=219 Identities=26% Similarity=0.373 Sum_probs=185.0
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
+++++..+++ +.+|+|+|++|++|.+|+++|||||||||||.+++.+++.+ +|+|.++|.++.... ..+.+
T Consensus 4 i~nv~K~y~~---~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~l 77 (252)
T COG4604 4 IENVSKSYGT---KVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKL 77 (252)
T ss_pred ehhhhHhhCC---EEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHH
Confidence 4566665543 57999999999999999999999999999999999999876 999999999886543 34677
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+..-|+...-..+||+|-+.|+.--... +.+-. +.+..+++.++.|+|
T Consensus 78 SILkQ~N~i~~rlTV~dLv~FGRfPYSq-----------------GRlt~---------------eD~~~I~~aieyl~L 125 (252)
T COG4604 78 SILKQENHINSRLTVRDLVGFGRFPYSQ-----------------GRLTK---------------EDRRIINEAIEYLHL 125 (252)
T ss_pred HHHHhhchhhheeEHHHHhhcCCCcccC-----------------CCCch---------------HHHHHHHHHHHHhcc
Confidence 8899998888899999999996321111 11111 123458999999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++..|.. ..+||||||||.-||+.++.+.+.++||||.+.||...+..+++.|++++++.++++|+ +.||.+++
T Consensus 126 ~~l~dry-----Ld~LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfA 199 (252)
T COG4604 126 EDLSDRY-----LDELSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFA 199 (252)
T ss_pred cchHHHh-----HHhcccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHH
Confidence 9887655 45699999999999999999999999999999999999999999999999988666555 67999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
..++|+|+-|.+|+++.+|+++++.+
T Consensus 200 S~YsD~IVAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 200 SCYSDHIVALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred HhhhhheeeecCCEEEecCCHHHhcC
Confidence 99999999999999999999998853
No 432
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=323.34 Aligned_cols=218 Identities=25% Similarity=0.363 Sum_probs=175.9
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++ +..+|+|+||++++|++++|+|+||||||||+++|+|++++. +|+|.++|.++.... .++.+
T Consensus 5 ~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 5 TENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhhe
Confidence 345555543 246999999999999999999999999999999999998775 999999998764321 23569
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+|++|++.+++.+||+||+.++..... ..+.. . .......++++++.+||
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~--~~~~~-------------~---------------~~~~~~~~~~~l~~~~l 128 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWL--SLWGR-------------L---------------SAEDNARVNQAMEQTRI 128 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhh--hhccC-------------C---------------CHHHHHHHHHHHHHcCC
Confidence 999999888888999999987521000 00000 0 00012236788999999
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
.+..++.+ ..|||||||||+||||++.+|++++|||||+|||+.++..+.+.|+++.+. +++|++++|+.+++
T Consensus 129 ~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~--~~tiii~tH~~~~~ 201 (255)
T PRK11231 129 NHLADRRL-----TDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQ--GKTVVTVLHDLNQA 201 (255)
T ss_pred HHHHcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEECCHHHH
Confidence 87766654 469999999999999999999999999999999999999999999988642 56777799999999
Q ss_pred HhhcccEEEecCCcEEEEcCcchH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
.+++|++++|++|+++..|+.+++
T Consensus 202 ~~~~d~i~~l~~G~i~~~~~~~~~ 225 (255)
T PRK11231 202 SRYCDHLVVLANGHVMAQGTPEEV 225 (255)
T ss_pred HHhcCEEEEEECCeEEEEcCHHHh
Confidence 999999999999999999987765
No 433
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=324.26 Aligned_cols=221 Identities=19% Similarity=0.313 Sum_probs=172.7
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCC--CCceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~--~~~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.++ .+.+|+|+||+|++||+++|+||||||||||+++|+|.+.+ ..+.+|+|.++|.++... ..
T Consensus 15 i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 91 (259)
T PRK14274 15 INGMNLWYG---QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVEL 91 (259)
T ss_pred EeeEEEEEC---CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHH
Confidence 345555543 24699999999999999999999999999999999999863 212489999999886421 12
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++. ||+||+.|.....+... + .+....++++++
T Consensus 92 ~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~ 137 (259)
T PRK14274 92 RKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHGTKN--K-------------------------------KKLQEIVEKSLK 137 (259)
T ss_pred hhceEEEecCCccccc-CHHHHHHhHHHhcCCCC--H-------------------------------HHHHHHHHHHHH
Confidence 4569999999988875 99999987643221000 0 001123667788
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||.+...... +...++||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.. +.++++++|+
T Consensus 138 ~~~l~~~~~~~l-~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiivtH~ 213 (259)
T PRK14274 138 DVALWDEVKDRL-HTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE---KYTIVIVTHN 213 (259)
T ss_pred HcCCchhhhhhh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEEcC
Confidence 888853211111 234457999999999999999999999999999999999999999999998853 3567779999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++.++||++++|++|+++..|+++++.
T Consensus 214 ~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 214 MQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999988763
No 434
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.3e-35 Score=363.13 Aligned_cols=209 Identities=26% Similarity=0.411 Sum_probs=173.4
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.+.++|+++... +++++|+|+|++|+|||++||+||||||||||+++|+|.. + .+|+|.+||.++
T Consensus 349 ~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 588888875431 2357999999999999999999999999999999999987 3 489999999876
Q ss_pred Cc---ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-------ccCcccCCC
Q 001507 767 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 836 (1065)
Q Consensus 767 ~~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-------~~~~~~~~~ 836 (1065)
.. ..+++.++||+|++.++.. |++||+.++. + +.+. +.++++++..++.+. .|+.+|..
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~----~-~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~- 482 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN----P-DASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ- 482 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC----C-CCCH----HHHHHHHHHhCHHHHHHhcccccccccccC-
Confidence 43 5678899999999998875 9999998752 1 2222 345667776666442 35556544
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecC
Q 001507 837 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 916 (1065)
Q Consensus 837 ~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 916 (1065)
..+||||||||++|||||+++|+||+||||||+||++++..|++.|+++. +++|+|++||+++ ....+|+|++|+ +
T Consensus 483 G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~-~ 558 (588)
T PRK11174 483 AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQ-D 558 (588)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEe-C
Confidence 35799999999999999999999999999999999999999999999875 5899999999985 567799999998 5
Q ss_pred cEEEEeCCC
Q 001507 917 GELIYAGPL 925 (1065)
Q Consensus 917 g~~~~~g~~ 925 (1065)
|+++..|+.
T Consensus 559 G~i~e~G~~ 567 (588)
T PRK11174 559 GQIVQQGDY 567 (588)
T ss_pred CeEeecCCH
Confidence 899999974
No 435
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-35 Score=319.51 Aligned_cols=218 Identities=22% Similarity=0.266 Sum_probs=171.3
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g 763 (1065)
-+.++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~-------------~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFY-------------GGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEe-------------CCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 46667776544 3457999999999999999999999999999999999975421 2589999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCC
Q 001507 764 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 838 (1065)
Q Consensus 764 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~ 838 (1065)
.++.. ..+++.++|++|++.+++. |+.||+.+....+. .. ....+.++++++.+++........ ...+.
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 160 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKL-KEKGT 160 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHh-cCCcc
Confidence 87632 2345679999999888764 99999987643321 11 112344567778777642111111 11235
Q ss_pred CCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe----
Q 001507 839 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK---- 914 (1065)
Q Consensus 839 ~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~---- 914 (1065)
.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|.
T Consensus 161 ~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~~~ 238 (274)
T PRK14265 161 ALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTEID 238 (274)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999864 799999999986 5778899999997
Q ss_pred ----cCcEEEEeCCC
Q 001507 915 ----RGGELIYAGPL 925 (1065)
Q Consensus 915 ----~gg~~~~~g~~ 925 (1065)
+.|++++.|+.
T Consensus 239 ~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 239 EYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccCceEEEeCCH
Confidence 25899999986
No 436
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=324.05 Aligned_cols=220 Identities=20% Similarity=0.276 Sum_probs=172.0
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcC--CCCceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~--~~~~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++ +..+|+|+|++|++||+++|+||||||||||+++|+|.+. |..+.+|+|.++|.++... ..+
T Consensus 17 ~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~ 93 (260)
T PRK10744 17 RNLNFYYG---KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLR 93 (260)
T ss_pred EEEEEEeC---CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHh
Confidence 44555443 2469999999999999999999999999999999999986 2223589999999886421 124
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++ .||+||+.+....... .+ . .....+++++++.
T Consensus 94 ~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~---~~----------------~--------------~~~~~~~~~~l~~ 139 (260)
T PRK10744 94 AKVGMVFQKPTPFP-MSIYDNIAFGVRLFEK---LS----------------R--------------AEMDERVEWALTK 139 (260)
T ss_pred cceEEEecCCccCc-CcHHHHHhhhHhhcCC---CC----------------H--------------HHHHHHHHHHHHH
Confidence 57999999988777 8999999876432100 00 0 0011236778888
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+||.+...... ++...+||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|++++|+.
T Consensus 140 ~~l~~~~~~~~-~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~---~~tiii~sH~~ 215 (260)
T PRK10744 140 AALWNEVKDKL-HQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ---DYTVVIVTHNM 215 (260)
T ss_pred cCCChhhHHHH-hcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCH
Confidence 88743211111 223457999999999999999999999999999999999999999999998842 35777799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++..++|++++|++|+++..|+.+++.
T Consensus 216 ~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 216 QQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999887764
No 437
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.6e-35 Score=317.19 Aligned_cols=215 Identities=27% Similarity=0.375 Sum_probs=176.9
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC-CCceEEEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYV 85 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~-~~~~~~yv 85 (1065)
+++++.++ .+++|+|+|+++.+||+++|+||||||||||+++|+|.+.+. +|+|.++|.++.... .++.++|+
T Consensus 4 ~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~ 77 (237)
T TIGR00968 4 ANISKRFG---SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFV 77 (237)
T ss_pred EEEEEEEC---CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEE
Confidence 34555543 246999999999999999999999999999999999998765 999999998875432 24579999
Q ss_pred ccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCccc
Q 001507 86 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 165 (1065)
Q Consensus 86 ~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 165 (1065)
+|++.+++..|++||+.+.....+... ......++++++.++|.+.
T Consensus 78 ~q~~~~~~~~t~~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~ 123 (237)
T TIGR00968 78 FQHYALFKHLTVRDNIAFGLEIRKHPK----------------------------------AKIKARVEELLELVQLEGL 123 (237)
T ss_pred ecChhhccCCcHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhH
Confidence 999988888999999987643221000 0001236788899999766
Q ss_pred ccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhh
Q 001507 166 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 245 (1065)
Q Consensus 166 ~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~ 245 (1065)
.++.+ +.||||||||++||||++.+|++++|||||+|||+.++..+.+.|++++.. .+.+|++++|+.+++.++
T Consensus 124 ~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~-~~~tvli~sH~~~~~~~~ 197 (237)
T TIGR00968 124 GDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDE-VHVTTVFVTHDQEEAMEV 197 (237)
T ss_pred hhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhh
Confidence 66554 469999999999999999999999999999999999999999999987653 356777789999999999
Q ss_pred cccEEEecCCcEEEEcCcchHH
Q 001507 246 FDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 246 ~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
||++++|++|++++.|+.+++.
T Consensus 198 ~d~i~~l~~g~i~~~~~~~~~~ 219 (237)
T TIGR00968 198 ADRIVVMSNGKIEQIGSPDEVY 219 (237)
T ss_pred cCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999987764
No 438
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=313.63 Aligned_cols=203 Identities=25% Similarity=0.376 Sum_probs=166.5
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCC-------CCCc
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPR 80 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~-------~~~~ 80 (1065)
++++.+++ +.+ |+||++++ |+++|+||||||||||+++|+|.+.|+ +|+|.++|.++... ..++
T Consensus 5 ~l~~~~~~---~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 5 DIEKRLPD---FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred eeeEecCC---eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhh
Confidence 34555543 234 99999999 999999999999999999999999775 99999999876421 1245
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++.+|++||+.+..... .. . ..+..++++++.+
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~-----~~---~----------------------------~~~~~~~~~l~~~ 119 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRK-----RN---R----------------------------EDRISVDELLDLL 119 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhC-----CH---H----------------------------HHHHHHHHHHHHc
Confidence 7999999999898999999998753210 00 0 0012367789999
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||++..++.+ ..||||||||++||||++.+|++++|||||+|||+.++..+.+.|++++++ .+++|++++|+.+
T Consensus 120 ~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~ 193 (214)
T cd03297 120 GLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKN-LNIPVIFVTHDLS 193 (214)
T ss_pred CCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEecCHH
Confidence 9987665544 469999999999999999999999999999999999999999999998753 3567777999999
Q ss_pred HHHhhcccEEEecCCcEEEEc
Q 001507 241 EAYELFDDVILLSEGQIVYQG 261 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G 261 (1065)
++..++|++++|++|++++.|
T Consensus 194 ~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 194 EAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHhcCEEEEEECCEEEecC
Confidence 999999999999999998765
No 439
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.9e-35 Score=322.32 Aligned_cols=217 Identities=27% Similarity=0.398 Sum_probs=174.9
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.++ +..+|+|+||++++||+++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++
T Consensus 5 ~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 5 SRVSWSAG---GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred EeEEEEEC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheE
Confidence 34555443 246999999999999999999999999999999999998775 999999998765432 234689
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD 163 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~ 163 (1065)
|++|++.+++.+||+||+.++..... ..+ . .+ .......+.++++.+||.
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~--~~~-------------~-~~--------------~~~~~~~~~~~l~~~~l~ 128 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHR--SLW-------------A-GD--------------SPHDAAVVDRALARTELS 128 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhh--hhc-------------c-CC--------------CHHHHHHHHHHHHHcCcH
Confidence 99999877788999999987421000 000 0 00 000122477889999998
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHH
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 243 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~ 243 (1065)
+..++.+ ..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+ .+++|++++|+.+++.
T Consensus 129 ~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~ 201 (256)
T TIGR03873 129 HLADRDM-----STLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA--TGVTVVAALHDLNLAA 201 (256)
T ss_pred hhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHH
Confidence 7666654 46999999999999999999999999999999999999999999998864 2567888999999999
Q ss_pred hhcccEEEecCCcEEEEcCcchH
Q 001507 244 ELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 244 ~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
++||+|++|++|++++.|+.+++
T Consensus 202 ~~~d~i~~l~~G~i~~~g~~~~~ 224 (256)
T TIGR03873 202 SYCDHVVVLDGGRVVAAGPPREV 224 (256)
T ss_pred HhCCEEEEEeCCCEEEecCHHHh
Confidence 99999999999999999987765
No 440
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=321.32 Aligned_cols=218 Identities=22% Similarity=0.257 Sum_probs=170.5
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~--~-~~~~G~i~i~g 763 (1065)
-+.++|+++.+ +++.+|+|+||+|++||++||+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWY-------------GEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEE-------------CCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 36677776554 23469999999999999999999999999999999999764 1 13689999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCC
Q 001507 764 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGI 837 (1065)
Q Consensus 764 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~ 837 (1065)
.++.. ..+++.++|++|++.+++ .|++||+.+....+.. .......+.+.++++.+++.. +.+.. ...+
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~l~~~~--~~~~ 165 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHGI--KDKKTLDEIVEKSLRGAAIWDELKDRL--HDNA 165 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchHHHHH--hcCc
Confidence 87632 234567999999988877 4999999886533211 112222344567777765432 11111 1123
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCc
Q 001507 838 NGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGG 917 (1065)
Q Consensus 838 ~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg 917 (1065)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+ +|
T Consensus 166 ~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~-~G 242 (271)
T PRK14238 166 YGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL-NG 242 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE-CC
Confidence 68999999999999999999999999999999999999999999999865 799999999986 5677899999998 58
Q ss_pred EEEEeCCC
Q 001507 918 ELIYAGPL 925 (1065)
Q Consensus 918 ~~~~~g~~ 925 (1065)
+++..|+.
T Consensus 243 ~i~~~g~~ 250 (271)
T PRK14238 243 YVNEYDDT 250 (271)
T ss_pred EEEEeCCH
Confidence 99998874
No 441
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.1e-36 Score=372.16 Aligned_cols=217 Identities=25% Similarity=0.330 Sum_probs=171.1
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.++.. +.++|+|+|++|++||.++|+|+||||||||+|+|+|++.|. +|+|.+||.++.+.. .++.+
T Consensus 454 ~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i 529 (686)
T TIGR03797 454 VDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQL 529 (686)
T ss_pred EEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhcc
Confidence 34556665432 356999999999999999999999999999999999999876 999999999987653 35789
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+||+|++.+|+ .|++|||.++.. ...+.+.++++. .. +++.++ .+
T Consensus 530 ~~v~Q~~~lf~-gTI~eNi~~~~~-----~~~e~i~~al~~------------------a~---------l~~~i~--~l 574 (686)
T TIGR03797 530 GVVLQNGRLMS-GSIFENIAGGAP-----LTLDEAWEAARM------------------AG---------LAEDIR--AM 574 (686)
T ss_pred EEEccCCccCc-ccHHHHHhcCCC-----CCHHHHHHHHHH------------------cC---------cHHHHH--hc
Confidence 99999999876 599999987421 000111111100 00 111111 35
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++..||.+|+.+ .+||||||||++||||++++|+|++||||||+||+.+..++.+.|+++ + .|+++++|..+.+
T Consensus 575 p~G~dt~ige~G-~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~-~T~IiItHr~~~i 648 (686)
T TIGR03797 575 PMGMHTVISEGG-GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----K-VTRIVIAHRLSTI 648 (686)
T ss_pred cccccccccCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----C-CeEEEEecChHHH
Confidence 667899999865 579999999999999999999999999999999999999999999875 2 3566678877655
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
+.+|+|++|++|++++.|+++++.+
T Consensus 649 -~~~D~Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 649 -RNADRIYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred -HcCCEEEEEECCEEEEECCHHHHHh
Confidence 5699999999999999999998864
No 442
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2e-35 Score=311.15 Aligned_cols=187 Identities=28% Similarity=0.353 Sum_probs=157.2
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCH
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
+++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+......++.++|++|++.+++.+|+
T Consensus 13 ~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~tv 90 (207)
T PRK13539 13 GGRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALTV 90 (207)
T ss_pred CCeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCcchhhHhhcEEecCCCcCCCCCcH
Confidence 34579999999999999999999999999999999999876 5689999999875322256678999999888889999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+||+.+....+. .. .+.++++++.+++.+..+... +.||||||||++|||+|+.+|++|+|||||+||
T Consensus 91 ~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 158 (207)
T PRK13539 91 AENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRRVALARLLVSNRPIWILDEPTAAL 158 (207)
T ss_pred HHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999987543321 11 134788999999977655443 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe
Q 001507 871 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 914 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 914 (1065)
|+.+...+.+.|++++++|+|||++||+++ ++. . |+++.+.
T Consensus 159 D~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~~ 199 (207)
T PRK13539 159 DAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDLG 199 (207)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEeec
Confidence 999999999999998777999999999976 343 3 8887774
No 443
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2e-35 Score=321.70 Aligned_cols=210 Identities=20% Similarity=0.285 Sum_probs=169.7
Q ss_pred EEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCC
Q 001507 688 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR 767 (1065)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~ 767 (1065)
+.++|+++.++. +...+|+|+||+|++||+++|+||||||||||+++|+|..+ .+|+|.+||.++.
T Consensus 3 i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i~ 68 (275)
T cd03289 3 MTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSWN 68 (275)
T ss_pred EEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEhh
Confidence 456666655421 23469999999999999999999999999999999999875 3799999998764
Q ss_pred c---ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccC------CCCC
Q 001507 768 Q---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGL------PGIN 838 (1065)
Q Consensus 768 ~---~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~------~~~~ 838 (1065)
. ..+++.++||+|++.+++. |++||+.... ... .+.++++++.++|.+..+...+. ....
T Consensus 69 ~~~~~~lr~~i~~v~q~~~lf~~-tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~ 137 (275)
T cd03289 69 SVPLQKWRKAFGVIPQKVFIFSG-TFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGC 137 (275)
T ss_pred hCCHHHHhhhEEEECCCcccchh-hHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCC
Confidence 2 3456789999999998875 9999996321 111 23467788888987655543321 1234
Q ss_pred CCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 839 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 839 ~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
.||||||||++|||||+.+|+||+|||||++||+.+...+++.|+++. .++|||+++|+++ .+ ..+|++++|+ .|+
T Consensus 138 ~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~-~G~ 213 (275)
T cd03289 138 VLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIE-ENK 213 (275)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEec-CCe
Confidence 699999999999999999999999999999999999999999999874 5899999999985 34 4599999998 589
Q ss_pred EEEeCCCC
Q 001507 919 LIYAGPLG 926 (1065)
Q Consensus 919 ~~~~g~~~ 926 (1065)
+++.|++.
T Consensus 214 i~~~g~~~ 221 (275)
T cd03289 214 VRQYDSIQ 221 (275)
T ss_pred EeecCCHH
Confidence 99999863
No 444
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=323.96 Aligned_cols=220 Identities=23% Similarity=0.302 Sum_probs=174.0
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++ .+++|+|+|+++++||+++|+|||||||||||++|+|.+.|. .+.+|+|.++|.++... ..+
T Consensus 24 ~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 100 (267)
T PRK14237 24 KDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMR 100 (267)
T ss_pred eeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHh
Confidence 45555543 356999999999999999999999999999999999998642 13599999999887432 124
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++ .||+||+.++....+... + ...+..+.++++.
T Consensus 101 ~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~ 146 (267)
T PRK14237 101 KHIGMVFQRPNPFA-KSIYENITFALERAGVKD--K-------------------------------KVLDEIVETSLKQ 146 (267)
T ss_pred cceEEEecCCcccc-ccHHHHHHhHHHhcCCCC--H-------------------------------HHHHHHHHHHHHH
Confidence 57999999988777 599999988643211000 0 0012236778888
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
++|.+..+... ++.++.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+ +.+|++++|+.
T Consensus 147 ~~l~~~i~~~~-~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~ 222 (267)
T PRK14237 147 AALWDQVKDDL-HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK---NYTIIIVTHNM 222 (267)
T ss_pred cCCCchhhhhh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEecCH
Confidence 88854322222 234567999999999999999999999999999999999999999999998842 36777799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++.++||++++|++|++++.|+++++.
T Consensus 223 ~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 223 QQAARASDYTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred HHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999987763
No 445
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.8e-36 Score=332.80 Aligned_cols=213 Identities=25% Similarity=0.388 Sum_probs=176.0
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.+.++ +.++|+|+||++++||.++|+|++|||||||++.|+|-+.|+ +|+|.+||.++.... .+..+
T Consensus 339 ~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i 414 (573)
T COG4987 339 LRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETI 414 (573)
T ss_pred eccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHH
Confidence 56788887654 357999999999999999999999999999999999998776 999999999876553 35678
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
++++|...+|. .|+|+||.++...- .++.+-++++..||
T Consensus 415 ~vl~Qr~hlF~-~Tlr~NL~lA~~~A----------------------------------------sDEel~~aL~qvgL 453 (573)
T COG4987 415 SVLTQRVHLFS-GTLRDNLRLANPDA----------------------------------------SDEELWAALQQVGL 453 (573)
T ss_pred hhhccchHHHH-HHHHHHHhhcCCCC----------------------------------------CHHHHHHHHHHcCH
Confidence 99999988776 59999998853210 01123444555554
Q ss_pred c-------ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEe
Q 001507 163 D-------TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 235 (1065)
Q Consensus 163 ~-------~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~ 235 (1065)
+ +..||.+|+. .+.||||||||++|||+|++++++++|||||.|||+.|.+++++.+.+.++ ++|++++
T Consensus 454 ~~l~~~~p~gl~t~lge~-G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~---~kTll~v 529 (573)
T COG4987 454 EKLLESAPDGLNTWLGEG-GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE---GKTLLMV 529 (573)
T ss_pred HHHHHhChhhhhchhccC-CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc---CCeEEEE
Confidence 4 3667889875 457999999999999999999999999999999999999999999987653 5667778
Q ss_pred cCCchHHHhhcccEEEecCCcEEEEcCcchHHH
Q 001507 236 LQPAPEAYELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 236 ~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
||+...+ +.||+|++|++|+++++|.+.++..
T Consensus 530 THrL~~l-e~~drIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 530 THRLRGL-ERMDRIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred ecccccH-hhcCEEEEEECCeeeecCCHHhhhc
Confidence 8888766 5679999999999999999998864
No 446
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=323.38 Aligned_cols=221 Identities=23% Similarity=0.365 Sum_probs=171.8
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.++. +.+++|+||+|++||+++|+||||||||||+++|+|.+.+. .+.+|+|.++|.++... ..
T Consensus 6 ~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (250)
T PRK14240 6 VKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQL 82 (250)
T ss_pred EEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHH
Confidence 4556655542 36999999999999999999999999999999999987531 12589999999887531 12
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++ .||+||+.++....+... . ...++.++++++
T Consensus 83 ~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~ 128 (250)
T PRK14240 83 RKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGIKD--K-------------------------------KKLDEIVEKSLK 128 (250)
T ss_pred hccEEEEecCCccCc-ccHHHHHHHHHHhcCCCC--H-------------------------------HHHHHHHHHHHH
Confidence 457999999988777 899999988643221100 0 001123566777
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+++.+...... ++.+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|++++|+
T Consensus 129 ~~~l~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~ 204 (250)
T PRK14240 129 GAALWDEVKDRL-KKSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK---DYTIVIVTHN 204 (250)
T ss_pred HcCCchhhHHHH-hcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEEeC
Confidence 777643111111 233457999999999999999999999999999999999999999999998842 3577779999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++..++|++++|++|+++..|+.+++.
T Consensus 205 ~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 205 MQQASRISDKTAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred HHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999887663
No 447
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.8e-35 Score=318.99 Aligned_cols=203 Identities=27% Similarity=0.304 Sum_probs=164.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc-----CCc---c----cccceEEEEc
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP-----KRQ---E----TFARISGYCE 779 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~-----~~~---~----~~~~~~~~v~ 779 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+ +.. . ..++.++|++
T Consensus 15 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 92 (253)
T TIGR02323 15 GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVH 92 (253)
T ss_pred CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccccccccccCCHHHHHHhhhcceEEEE
Confidence 3568999999999999999999999999999999999876 568999999976 322 1 1235689999
Q ss_pred CCCC--CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc-cccCcccCCCCCCCCHHHHHHHHHHHHHHh
Q 001507 780 QNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVA 856 (1065)
Q Consensus 780 q~~~--~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~-~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~ 856 (1065)
|++. +.+.+|+.||+.+..... .. .......+.++++++.+++.+ ..+.. +..|||||||||+|||||+.
T Consensus 93 q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~-----~~~LSgG~~qrv~laral~~ 165 (253)
T TIGR02323 93 QNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL-----PRAFSGGMQQRLQIARNLVT 165 (253)
T ss_pred eCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC-----chhcCHHHHHHHHHHHHHhc
Confidence 9974 445679999987542211 10 011223456788999999863 44443 35799999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 857 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 857 ~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ .+...+|++++|. +|++++.|+.
T Consensus 166 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~~l~-~G~i~~~~~~ 233 (253)
T TIGR02323 166 RPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLLVMQ-QGRVVESGLT 233 (253)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEECCH
Confidence 99999999999999999999999999998654 899999999986 5667899999998 5899988874
No 448
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=321.90 Aligned_cols=221 Identities=23% Similarity=0.332 Sum_probs=172.0
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcC--CCCceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~--~~~~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|... |..+.+|+|.++|.++... ..
T Consensus 8 ~~~l~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 84 (252)
T PRK14239 8 VSDLSVYYN---KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDL 84 (252)
T ss_pred EEeeEEEEC---CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhh
Confidence 345555543 2469999999999999999999999999999999999853 3222489999999876421 12
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++ .||+||+.++....+... . ...+..++++++
T Consensus 85 ~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~ 130 (252)
T PRK14239 85 RKEIGMVFQQPNPFP-MSIYENVVYGLRLKGIKD--K-------------------------------QVLDEAVEKSLK 130 (252)
T ss_pred hhcEEEEecCCccCc-CcHHHHHHHHHHHcCCCc--H-------------------------------HHHHHHHHHHHH
Confidence 457999999998777 899999988643221100 0 001123566777
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+++.....+.. ++.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+
T Consensus 131 ~~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~ 206 (252)
T PRK14239 131 GASIWDEVKDRL-HDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRS 206 (252)
T ss_pred HcCCchhHHHHH-hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECC
Confidence 888743211111 234557999999999999999999999999999999999999999999998853 3 577779999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++..+||++++|++|++++.|+.+++.
T Consensus 207 ~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 207 MQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999987764
No 449
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.7e-35 Score=320.54 Aligned_cols=216 Identities=20% Similarity=0.250 Sum_probs=172.7
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC-ceeEEEEECCccCCCCCC-CceEE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-QVSGKITYNGHGFKEFVP-PRTSA 83 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~-~~~G~i~~~g~~~~~~~~-~~~~~ 83 (1065)
++++++.+ +..+|+|+|+++++||+++|+|+||||||||+++|+|.++|.. +.+|+|.++|.++..... ++.++
T Consensus 7 ~~~l~~~~----~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~ 82 (254)
T PRK10418 7 LRNIALQA----AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIA 82 (254)
T ss_pred EeCeEEEe----ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEE
Confidence 34555544 2369999999999999999999999999999999999987611 149999999988753322 35699
Q ss_pred EEccccc--cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC
Q 001507 84 YVSQQDW--QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 161 (1065)
Q Consensus 84 yv~Q~~~--~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg 161 (1065)
||+|++. +.+..|+.+++.+.+...+.. ..+..++++++.+|
T Consensus 83 ~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~l~~~~ 126 (254)
T PRK10418 83 TIMQNPRSAFNPLHTMHTHARETCLALGKP------------------------------------ADDATLTAALEAVG 126 (254)
T ss_pred EEecCCccccCccccHHHHHHHHHHHcCCC------------------------------------hHHHHHHHHHHHcC
Confidence 9999974 445679999986643211100 00123678889999
Q ss_pred Ccc---cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 162 LDT---CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 162 L~~---~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
|.+ ..++ .+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+
T Consensus 127 l~~~~~~~~~-----~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~ 200 (254)
T PRK10418 127 LENAARVLKL-----YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHD 200 (254)
T ss_pred CCChhhhhhc-----CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecC
Confidence 976 2333 34579999999999999999999999999999999999999999999998654 35677789999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++.+++|++++|++|++++.|+.+++.
T Consensus 201 ~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 201 MGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999987764
No 450
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=316.56 Aligned_cols=203 Identities=26% Similarity=0.334 Sum_probs=165.2
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeE------EEEEECCccCC---cccccceEEEEcCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIE------GDIYISGYPKR---QETFARISGYCEQN 781 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~------G~i~i~g~~~~---~~~~~~~~~~v~q~ 781 (1065)
+++.+|+|+||++.+||+++|+||||||||||+++|+|... +.+ |++.++|.+.. ...+++.++|++|+
T Consensus 21 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~--~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~~~~q~ 98 (257)
T PRK14246 21 NDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIE--IYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVGMVFQQ 98 (257)
T ss_pred CCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCcCceeEcCEEEECCcccccCCHHHHhcceEEEccC
Confidence 45679999999999999999999999999999999999865 334 55555555542 12345679999999
Q ss_pred CCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCc----cccCcccCCCCCCCCHHHHHHHHHHHHHHhC
Q 001507 782 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVAN 857 (1065)
Q Consensus 782 ~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~ 857 (1065)
+.+++.+|++||+.+....... ....+..+.++++++.+++.+ ..+. .+..||+|||||++|||+|+.+
T Consensus 99 ~~~~~~~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~LS~G~~qrl~laral~~~ 171 (257)
T PRK14246 99 PNPFPHLSIYDNIAYPLKSHGI--KEKREIKKIVEECLRKVGLWKEVYDRLNS-----PASQLSGGQQQRLTIARALALK 171 (257)
T ss_pred CccCCCCcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCCccchhhhcC-----CcccCCHHHHHHHHHHHHHHcC
Confidence 9999999999999886432211 122334456788999999854 2232 2357999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 858 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 858 p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+...||++++|+ +|+++..|+.
T Consensus 172 P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~-~g~i~~~g~~ 236 (257)
T PRK14246 172 PKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLY-NGELVEWGSS 236 (257)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 999999999999999999999999999864 699999999976 5668899999998 5899988875
No 451
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=323.06 Aligned_cols=221 Identities=24% Similarity=0.353 Sum_probs=173.6
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC--ceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~--~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.++ +..+|+|+||++++||+++|+|||||||||||++|+|.+++.+ +.+|+|.++|.++... ..
T Consensus 6 ~~~l~~~~~---~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~ 82 (250)
T PRK14262 6 IENFSAYYG---EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEY 82 (250)
T ss_pred EEeeEEEeC---CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHh
Confidence 345555553 2469999999999999999999999999999999999986421 2589999999876431 12
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++ .||+||+.++....+... + ...+..+++.++
T Consensus 83 ~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~ 128 (250)
T PRK14262 83 RKKVGMVFQKPTPFP-MSIYDNVAFGPRIHGVKS--K-------------------------------HKLDRIVEESLK 128 (250)
T ss_pred hhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCc--H-------------------------------HHHHHHHHHHHH
Confidence 457999999998777 899999988643211000 0 001123566777
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+|+.+..+.. .++.+.+||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++ ++++++++|+
T Consensus 129 ~~~l~~~~~~~-~~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tili~sH~ 204 (250)
T PRK14262 129 KAALWDEVKSE-LNKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE---NYTIVIVTHN 204 (250)
T ss_pred HcCCCchhHHH-HhCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc---CcEEEEEeCC
Confidence 88875421111 1334567999999999999999999999999999999999999999999998853 3677779999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++..++|++++|++|+++..|+++++.
T Consensus 205 ~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 205 IGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 99999999999999999999999987764
No 452
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=320.82 Aligned_cols=222 Identities=21% Similarity=0.311 Sum_probs=173.7
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcC--CCCceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~--~~~~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.++ .+.+|+|+||++++||+++|+|+||||||||+++|+|... +..+.+|+|.++|.++... ..
T Consensus 8 ~~~l~~~~~---~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 84 (251)
T PRK14244 8 VKNLNLWYG---SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLL 84 (251)
T ss_pred eeeEEEEEC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHH
Confidence 345555543 3469999999999999999999999999999999999975 2213599999999876432 12
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++. ||+||+.+....+...... ...+..++++++
T Consensus 85 ~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~ 131 (251)
T PRK14244 85 RAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLT 131 (251)
T ss_pred hhhEEEEecCcccccC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHH
Confidence 4579999999988875 9999998763322100000 001123677888
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||.+...+.+ +..+.+||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++. . +.+|++++|+
T Consensus 132 ~~~l~~~~~~~~-~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~--~~tiiiisH~ 207 (251)
T PRK14244 132 SVGLWEELGDRL-KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-K--NFTIIVVTHS 207 (251)
T ss_pred HcCCCchhhhHh-hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c--CCeEEEEeCC
Confidence 999865322222 23446799999999999999999999999999999999999999999999874 2 4677779999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++.++||++++|++|++++.|+++++.
T Consensus 208 ~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 208 MKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999887653
No 453
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-35 Score=319.42 Aligned_cols=206 Identities=21% Similarity=0.236 Sum_probs=164.2
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECCccCC-----cccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-----QETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g~~~~-----~~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+|++|++||++||+||||||||||+++|+|..... +.+|+|.++|.++. ...+++.++|++|++.
T Consensus 22 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 101 (264)
T PRK14243 22 SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVEVRRRIGMVFQKPN 101 (264)
T ss_pred CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHHHhhhEEEEccCCc
Confidence 357999999999999999999999999999999999975311 25899999998753 1234567999999988
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++ .|+.||+.+....+. .. ....+.++++++.+++.+..+... ...+..||||||||++|||||+.+|++|||
T Consensus 102 ~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~~LSgGq~qrv~laral~~~p~lllL 175 (264)
T PRK14243 102 PFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKL-KQSGLSLSGGQQQRLCIARAIAVQPEVILM 175 (264)
T ss_pred ccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 877 499999987653321 11 122345667777777743111111 112357999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEec--------CcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR--------GGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~--------gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.||++++|++ .|+++..|+.
T Consensus 176 DEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 176 DEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred eCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccccccccCceEEEeCCH
Confidence 999999999999999999999865 589999999986 67889999999972 4899999875
No 454
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.9e-36 Score=370.40 Aligned_cols=212 Identities=24% Similarity=0.370 Sum_probs=170.3
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.+++.+++++|+|+|++++|||.++|+||||||||||+++|+|.+.|. +|+|.+||.++.+.. .++.+
T Consensus 481 ~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i 557 (711)
T TIGR00958 481 FQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQV 557 (711)
T ss_pred EEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhc
Confidence 456666665444467999999999999999999999999999999999999876 999999999887653 35689
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh--
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-- 160 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l-- 160 (1065)
+||+|++.+|. .|++|||.++... ...+ .+.++++..
T Consensus 558 ~~v~Q~~~lF~-gTIreNI~~g~~~----~~~e------------------------------------~i~~al~~a~l 596 (711)
T TIGR00958 558 ALVGQEPVLFS-GSVRENIAYGLTD----TPDE------------------------------------EIMAAAKAANA 596 (711)
T ss_pred eEEecCccccc-cCHHHHHhcCCCC----CCHH------------------------------------HHHHHHHHcCC
Confidence 99999999776 5999999875210 0000 122222222
Q ss_pred -----CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEe
Q 001507 161 -----GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 235 (1065)
Q Consensus 161 -----gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~ 235 (1065)
.+++..||.+|+++ .+||||||||++||||++++|+|++||||||+||+.+...+.+ ... . +++|++++
T Consensus 597 ~~~i~~lp~GldT~ige~G-~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~-~~~TvIiI 670 (711)
T TIGR00958 597 HDFIMEFPNGYDTEVGEKG-SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---R-ASRTVLLI 670 (711)
T ss_pred HHHHHhCCCccCCcccCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---c-CCCeEEEE
Confidence 25567899999764 5799999999999999999999999999999999999999888 221 1 34567778
Q ss_pred cCCchHHHhhcccEEEecCCcEEEEcCcchHHH
Q 001507 236 LQPAPEAYELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 236 ~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
+|..+.+ ..+|+|++|++|++++.|+++++.+
T Consensus 671 tHrl~~i-~~aD~IivL~~G~ive~Gt~~eL~~ 702 (711)
T TIGR00958 671 AHRLSTV-ERADQILVLKKGSVVEMGTHKQLME 702 (711)
T ss_pred eccHHHH-HhCCEEEEEECCEEEEeeCHHHHHh
Confidence 8887655 5699999999999999999998864
No 455
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4e-36 Score=332.63 Aligned_cols=212 Identities=24% Similarity=0.382 Sum_probs=178.3
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.++++|+++.++. .+.++|+|+||++++||.+||+|+||||||||++.|+|... +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~-----------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPG-----------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCC-----------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 6788888887742 34579999999999999999999999999999999999776 5699999999886
Q ss_pred C---cccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCc-------ccCCC
Q 001507 767 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGAL-------IGLPG 836 (1065)
Q Consensus 767 ~---~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-------~~~~~ 836 (1065)
. +..+++.+++++|...+|.+ |+|+||..+. | +.+ ++.+.++++.+||.+..... +|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~~-Tlr~NL~lA~----~-~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFSG-TLRDNLRLAN----P-DAS----DEELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHHH-HHHHHHhhcC----C-CCC----HHHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 4 33467789999998888765 9999997642 2 222 34578899999998765443 333 3
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecC
Q 001507 837 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 916 (1065)
Q Consensus 837 ~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 916 (1065)
.+.||||||||++|||+|+++.++++|||||.|||+.+.+++++.|.+-+ +|+|+|++||+.. -.+.||+|++|+ +
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~-~~kTll~vTHrL~--~le~~drIivl~-~ 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA-EGKTLLMVTHRLR--GLERMDRIIVLD-N 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh-cCCeEEEEecccc--cHhhcCEEEEEE-C
Confidence 56899999999999999999999999999999999999999999999865 5999999999975 357899999998 5
Q ss_pred cEEEEeCCCC
Q 001507 917 GELIYAGPLG 926 (1065)
Q Consensus 917 g~~~~~g~~~ 926 (1065)
|+++..|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 8999999764
No 456
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-35 Score=302.88 Aligned_cols=159 Identities=30% Similarity=0.436 Sum_probs=143.0
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-----ccccceEEEEcCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHSP 786 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~~~~ 786 (1065)
++.+++|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 12 ~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (178)
T cd03229 12 QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFP 89 (178)
T ss_pred CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccCC
Confidence 4579999999999999999999999999999999999876 568999999987542 234577999999998888
Q ss_pred CCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCC
Q 001507 787 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 866 (1065)
Q Consensus 787 ~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEP 866 (1065)
.+|++||+.+. ||||||||++|||+|+.+|++++||||
T Consensus 90 ~~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP 127 (178)
T cd03229 90 HLTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEP 127 (178)
T ss_pred CCCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 89999988531 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEec
Q 001507 867 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKR 915 (1065)
Q Consensus 867 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~ 915 (1065)
|+|||+.++..+.+.|++++++ |+|+|+++|+++ .+.+.+|++++|++
T Consensus 128 ~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~ 176 (178)
T cd03229 128 TSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRD 176 (178)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC
Confidence 9999999999999999999876 899999999976 56668999999985
No 457
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=322.02 Aligned_cols=221 Identities=23% Similarity=0.316 Sum_probs=172.7
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC--ceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~--~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|.+.+.+ +.+|+|.++|.++... ..
T Consensus 9 ~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (253)
T PRK14261 9 TKNLNLWYG---EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVAL 85 (253)
T ss_pred EeeeEEEEC---CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhh
Confidence 345555443 3469999999999999999999999999999999999875321 2489999999887542 22
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++. ||+||+.|.....+... . ...+..++++++
T Consensus 86 ~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~ 131 (253)
T PRK14261 86 RRKIGMVFQRPNPFPK-SIYENVAYGPRIHGEKN--K-------------------------------KTLDTIVEKSLK 131 (253)
T ss_pred hceEEEEecCCccCcc-cHHHHHHhhHHhcCCCC--H-------------------------------HHHHHHHHHHHH
Confidence 4569999999988874 99999988644321000 0 001123566777
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.++|.+...+.. ++....||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++ + .+|++++|+
T Consensus 132 ~~~l~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~ 207 (253)
T PRK14261 132 GAALWDEVKDRL-HDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHN 207 (253)
T ss_pred HhcCchhhHHHh-hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcC
Confidence 777753211111 234557999999999999999999999999999999999999999999998853 3 577779999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++.+++|++++|++|+++..|+.+++.
T Consensus 208 ~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 208 MQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 99999999999999999999999987663
No 458
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.7e-35 Score=315.61 Aligned_cols=195 Identities=27% Similarity=0.414 Sum_probs=159.1
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~lt 789 (1065)
+.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 469999999999999999999999999999999999876 468999999987532 234567999999988776 69
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCccc------CCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIG------LPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~------~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+.||+.+... ... .+.+.++++.+++.+..+.... ......||||||||++|||+|+.+|++|+|
T Consensus 94 v~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llll 164 (220)
T cd03245 94 LRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLL 164 (220)
T ss_pred HHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999976421 111 1235677888888766554321 112358999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 923 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g 923 (1065)
||||+|||+.++..+.+.|++++++ +|||++||+++ .. +.+|++++|.+ |++++.|
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~-~~~d~v~~l~~-g~i~~~~ 220 (220)
T cd03245 165 DEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-LL-DLVDRIIVMDS-GRIVADG 220 (220)
T ss_pred eCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-HH-HhCCEEEEEeC-CeEeecC
Confidence 9999999999999999999998754 89999999986 34 78999999985 7887654
No 459
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=322.53 Aligned_cols=220 Identities=22% Similarity=0.315 Sum_probs=171.6
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCCC----CCC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF----VPP 79 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~~----~~~ 79 (1065)
++++++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|.+++. .+.+|+|.++|.++... ..+
T Consensus 6 ~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~ 82 (249)
T PRK14253 6 IENLDLFYG---ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLR 82 (249)
T ss_pred EeccEEEEC---CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHH
Confidence 456666554 246999999999999999999999999999999999988652 13489999999876421 224
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++ .||+||+.++....+... + ...++.+++.++.
T Consensus 83 ~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~~~~--~-------------------------------~~~~~~~~~~~~~ 128 (249)
T PRK14253 83 IKVGMVFQKPNPFP-MSIYENVAYGLRAQGIKD--K-------------------------------KVLDEVVERSLRG 128 (249)
T ss_pred hheeEEecCCCcCc-ccHHHHHHhHHHhcCCCc--h-------------------------------HHHHHHHHHHHHH
Confidence 56999999998887 899999987643211000 0 0011235566777
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+|+.+...... +.....|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|++++|+.
T Consensus 129 ~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~ 204 (249)
T PRK14253 129 AALWDEVKDRL-KSHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSM 204 (249)
T ss_pred cCCchhhhHHh-hcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCH
Confidence 77653211111 233457999999999999999999999999999999999999999999999853 3 6777799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+++.++||++++|++|++++.|+.+++
T Consensus 205 ~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 205 QQARRISDRTAFFLMGELVEHDDTQVI 231 (249)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999987665
No 460
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.1e-35 Score=366.65 Aligned_cols=208 Identities=28% Similarity=0.391 Sum_probs=175.6
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 766 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~ 766 (1065)
.++++|+++.++. .++.+|+|+|++|+|||++||+||||||||||+++|+|..+ +.+|+|.+||+++
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 5888999887731 23579999999999999999999999999999999999987 5689999999886
Q ss_pred C---cccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccc-------cCcccCCC
Q 001507 767 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 836 (1065)
Q Consensus 767 ~---~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~-------~~~~~~~~ 836 (1065)
. ...+++.+|||+|++.++++ |++||+.++. + .+ ++.++++++..++.+.. |+.++..
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~- 585 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMSG-SIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG- 585 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCcc-cHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 4 35678889999999999865 9999998742 1 12 23467788888776543 4445443
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecC
Q 001507 837 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 916 (1065)
Q Consensus 837 ~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 916 (1065)
..+||||||||++|||||+++|+||+||||||+||+.+.+.+++.|+++ ++|+|++||+++ ..+.+|+|++|+ +
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~-~ 659 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLD-A 659 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEE-C
Confidence 3679999999999999999999999999999999999999999999886 589999999975 567799999998 5
Q ss_pred cEEEEeCCC
Q 001507 917 GELIYAGPL 925 (1065)
Q Consensus 917 g~~~~~g~~ 925 (1065)
|+++..|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 899999985
No 461
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.9e-35 Score=307.05 Aligned_cols=185 Identities=25% Similarity=0.298 Sum_probs=155.2
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCC
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 788 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~l 788 (1065)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+
T Consensus 11 ~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (198)
T TIGR01189 11 GERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPEL 88 (198)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCC
Confidence 34679999999999999999999999999999999999876 568999999987532 23456789999998888889
Q ss_pred CHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCC
Q 001507 789 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 868 (1065)
Q Consensus 789 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPts 868 (1065)
|+.||+.+....+. . + .+.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~ 156 (198)
T TIGR01189 89 SALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTT 156 (198)
T ss_pred cHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999987643321 1 1 234678899999987666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEE
Q 001507 869 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLF 912 (1065)
Q Consensus 869 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~ 912 (1065)
|||+.++..+.+.|++++++|.|||++||++.. + .+++++.
T Consensus 157 ~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~-~--~~~~~~~ 197 (198)
T TIGR01189 157 ALDKAGVALLAGLLRAHLARGGIVLLTTHQDLG-L--VEARELR 197 (198)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEEccccc-c--cceEEee
Confidence 999999999999999987779999999999752 2 3466553
No 462
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.4e-36 Score=362.97 Aligned_cols=219 Identities=26% Similarity=0.377 Sum_probs=175.8
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceE
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTS 82 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~ 82 (1065)
++++++.+++ +.++|+|+||+++|||.+||+||||||||||++.|.|.+.|. +|+|.+||.++.+.. .++.+
T Consensus 331 f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I 405 (567)
T COG1132 331 FENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRI 405 (567)
T ss_pred EEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhc
Confidence 3455555543 457999999999999999999999999999999999999875 999999999887664 46789
Q ss_pred EEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC
Q 001507 83 AYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 162 (1065)
Q Consensus 83 ~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL 162 (1065)
+||+|++.+|. .||+|||.++..- ...+.+.++++.. .+.+.+. .+
T Consensus 406 ~~V~Qd~~LF~-~TI~~NI~~g~~~----at~eei~~a~k~a---------------------------~~~d~I~--~l 451 (567)
T COG1132 406 GIVSQDPLLFS-GTIRENIALGRPD----ATDEEIEEALKLA---------------------------NAHEFIA--NL 451 (567)
T ss_pred cEEcccceeec-ccHHHHHhcCCCC----CCHHHHHHHHHHh---------------------------ChHHHHH--hC
Confidence 99999999888 6999999986321 0111121111110 0222222 35
Q ss_pred cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHH
Q 001507 163 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 242 (1065)
Q Consensus 163 ~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~ 242 (1065)
++.+||.||+++ .+||||||||++||||++.+|+|++||||||+||+.+...+.+.++++.+ ++|+++ ++|..+.+
T Consensus 452 p~g~dt~vge~G-~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~ii-IaHRlsti 527 (567)
T COG1132 452 PDGYDTIVGERG-VNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLI-IAHRLSTI 527 (567)
T ss_pred cccccceecCCC-ccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEE-EeccHhHH
Confidence 778899999655 47999999999999999999999999999999999999999999997653 345555 88888777
Q ss_pred HhhcccEEEecCCcEEEEcCcchHHH
Q 001507 243 YELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 243 ~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
.+ +|+|++|++|++++.|+++++..
T Consensus 528 ~~-aD~IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 528 KN-ADRIIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred Hh-CCEEEEEECCEEEEecCHHHHHH
Confidence 66 99999999999999999999875
No 463
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-35 Score=318.91 Aligned_cols=220 Identities=19% Similarity=0.315 Sum_probs=172.4
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC--ceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~--~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...|.+ +.+|+|.++|.++... ..+
T Consensus 8 ~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (251)
T PRK14270 8 KNLNLWYG---EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELR 84 (251)
T ss_pred EEeEEEEC---CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHH
Confidence 44554443 2469999999999999999999999999999999999876421 2589999999887532 124
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++ .|++||+.|.....+... . ......++++++.
T Consensus 85 ~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~-~--------------------------------~~~~~~~~~~l~~ 130 (251)
T PRK14270 85 KRVGMVFQKPNPFP-MSIYDNVAYGPRIHGIKD-K--------------------------------KELDKIVEWALKK 130 (251)
T ss_pred hheEEEecCCCcCC-CcHHHHHHhHHHhcCCCc-H--------------------------------HHHHHHHHHHHHH
Confidence 56999999998887 899999988643221100 0 0011236677888
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+||.+...... +.....||||||||++||||++.+|+|++|||||+|||+.++.++.+.|+++.+ + .+|++++|+.
T Consensus 131 ~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~ 206 (251)
T PRK14270 131 AALWDEVKDDL-KKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNM 206 (251)
T ss_pred cCCchhhhhHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCH
Confidence 88743111111 234557999999999999999999999999999999999999999999998864 3 5677789999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++.++||++++|++|++++.|+++++.
T Consensus 207 ~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 207 QQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 9999999999999999999999988764
No 464
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=314.43 Aligned_cols=207 Identities=25% Similarity=0.311 Sum_probs=166.6
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCC--C-CeeEEEEEECCccCCc-----ccccceEEEEcCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 783 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~~~v~q~~~ 783 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|... + .+.+|+|.+||.++.. ...++.++|++|++.
T Consensus 15 ~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14266 15 DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVELRKKVGMVFQKPN 94 (250)
T ss_pred CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHHhhheEEEecCCc
Confidence 4579999999999999999999999999999999999743 1 1268999999987642 234567999999998
Q ss_pred CCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 784 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 784 ~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+++. |+.||+.+...... ....+...+++.++++.+++.+...... ......||+|||||++|||+|+.+|++|+|
T Consensus 95 ~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~~LS~Gq~qrv~laral~~~p~llll 170 (250)
T PRK14266 95 PFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKL-DKSALGLSGGQQQRLCIARTIAVSPEVILM 170 (250)
T ss_pred cCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHH-hCCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 8875 99999987643221 1122334456788888888754211111 122467999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|++++ +++|||++||+++ ++...+|++++|. +|++++.|+.
T Consensus 171 DEP~~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~-~~~~~~~~i~~l~-~G~i~~~g~~ 229 (250)
T PRK14266 171 DEPCSALDPISTTKIEDLIHKLK-EDYTIVIVTHNMQ-QATRVSKYTSFFL-NGEIIESGLT 229 (250)
T ss_pred cCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEECCHH-HHHhhcCEEEEEE-CCeEEEeCCH
Confidence 99999999999999999999986 4899999999986 5778899999997 5899998875
No 465
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.5e-35 Score=320.69 Aligned_cols=216 Identities=25% Similarity=0.328 Sum_probs=173.1
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCcc-----CCCCC----
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHG-----FKEFV---- 77 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~-----~~~~~---- 77 (1065)
+++++.+++ +.+|+|+||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +....
T Consensus 10 ~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 10 RGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHH
Confidence 455555432 46999999999999999999999999999999999999775 9999999987 54321
Q ss_pred ---CCceEEEEccccc--cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhH
Q 001507 78 ---PPRTSAYVSQQDW--QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLV 152 (1065)
Q Consensus 78 ---~~~~~~yv~Q~~~--~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (1065)
.++.++|++|++. +++.+|+.||+.+........ .+ ...+..
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~-~~--------------------------------~~~~~~ 130 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGAR-HY--------------------------------GDIRAT 130 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccC-cH--------------------------------HHHHHH
Confidence 1346999999973 567789999997642211000 00 001223
Q ss_pred HHHHHHHhCCcc-cccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEE
Q 001507 153 VEYIMKILGLDT-CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTT 231 (1065)
Q Consensus 153 v~~~l~~lgL~~-~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ 231 (1065)
++++++.+|+.+ ..++. +..||||||||++|||||+.+|+|++|||||+|||+.++..+.+.|+++.+. .+.+
T Consensus 131 ~~~~l~~~~l~~~~~~~~-----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~t 204 (258)
T PRK11701 131 AGDWLERVEIDAARIDDL-----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLA 204 (258)
T ss_pred HHHHHHHcCCChhHHhCC-----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcE
Confidence 678899999964 44544 3569999999999999999999999999999999999999999999988653 3577
Q ss_pred EEEecCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 232 VISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 232 ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
|++++|+.+++..++|++++|++|++++.|+++++.
T Consensus 205 ii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 205 VVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred EEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 888999999999999999999999999999887653
No 466
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=319.54 Aligned_cols=195 Identities=27% Similarity=0.381 Sum_probs=155.9
Q ss_pred eEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCCH
Q 001507 714 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 714 ~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++ .|+
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 69999999999999999999999999999999999876 568999999986532 234567999999988776 699
Q ss_pred HHHHHHHhhccCCCCCCHHHHH-----HHHHHHHHHc--CCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 791 LESLLFSAWLRLPSEIELETQR-----AFVEEVMELV--ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l--~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
+||+.+.... ....... ..+++.++.+ ++....+. .+..||+|||||++|||||+.+|++|+|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGE-----RGVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeecc-----CCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999875321 1111111 1123444444 34433332 2468999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+.+.|+++. ++.|||++||+++ ++ ..||++++|.+ |+++..|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 99999999999999999999986 4899999999986 45 45999999985 788888764
No 467
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-35 Score=321.41 Aligned_cols=220 Identities=23% Similarity=0.290 Sum_probs=174.3
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCC--CceeEEEEECCccCCCC----CCCc
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF----VPPR 80 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~--~~~~G~i~~~g~~~~~~----~~~~ 80 (1065)
+++++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|++.|. .+.+|+|.++|.++.+. ..++
T Consensus 25 ~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 101 (276)
T PRK14271 25 VNLTLGFA---GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRR 101 (276)
T ss_pred eeEEEEEC---CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhh
Confidence 45555553 346999999999999999999999999999999999998751 13599999999876532 1245
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.+++ .||+||+.++...... .. . .+....+.++++.+
T Consensus 102 ~i~~v~q~~~l~~-~tv~eni~~~~~~~~~---~~----------------~--------------~~~~~~~~~~l~~~ 147 (276)
T PRK14271 102 RVGMLFQRPNPFP-MSIMDNVLAGVRAHKL---VP----------------R--------------KEFRGVAQARLTEV 147 (276)
T ss_pred heEEeccCCccCC-ccHHHHHHHHHHhccC---CC----------------H--------------HHHHHHHHHHHHHc
Confidence 7999999998787 7999999875432100 00 0 00112356778888
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..++.. ++.+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+
T Consensus 148 ~l~~~~~~~l-~~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~ 223 (276)
T PRK14271 148 GLWDAVKDRL-SDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLA 223 (276)
T ss_pred CCCchhhhHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHH
Confidence 8865332222 234567999999999999999999999999999999999999999999998853 3 57777999999
Q ss_pred HHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 241 EAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 241 ~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++.+++|++++|++|++++.|+++++.
T Consensus 224 ~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 224 QAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999988764
No 468
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.4e-35 Score=322.93 Aligned_cols=207 Identities=23% Similarity=0.287 Sum_probs=170.2
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC------CCceEEEEcccc--c
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 90 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~------~~~~~~yv~Q~~--~ 90 (1065)
+.+|+|+||++++|++++|+||||||||||+++|+|.+.+. +|+|.++|.++.... .++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 57999999999999999999999999999999999998765 999999998765432 245799999997 3
Q ss_pred cCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc-cccccc
Q 001507 91 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 169 (1065)
Q Consensus 91 ~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-~~~~t~ 169 (1065)
+++..|+.|++.+...... . .+ .......++++++.+||. ...++.
T Consensus 102 ~~~~~t~~~~l~~~~~~~~-~--~~------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~ 148 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLL-S--LD------------------------------KAERLARASEMLRAVDLDDSVLDKR 148 (268)
T ss_pred cCCCCCHHHHHHHHHHhhc-c--CC------------------------------HHHHHHHHHHHHHHcCCChhHhhCC
Confidence 5677899999976432100 0 00 000122377889999996 445544
Q ss_pred ccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccE
Q 001507 170 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 249 (1065)
Q Consensus 170 vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v 249 (1065)
.+.||||||||++|||||+.+|+++||||||+|||+.++..+.+.|+++.+. .++++++++|+.+++..+||++
T Consensus 149 -----~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiiivsH~~~~i~~~~d~i 222 (268)
T PRK10419 149 -----PPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQ-FGTACLFITHDLRLVERFCQRV 222 (268)
T ss_pred -----CccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHH-cCcEEEEEECCHHHHHHhCCEE
Confidence 4569999999999999999999999999999999999999999999998653 3567777999999999999999
Q ss_pred EEecCCcEEEEcCcchHH
Q 001507 250 ILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 250 ~~l~~G~i~~~G~~~~~~ 267 (1065)
++|++|++++.|+++++.
T Consensus 223 ~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 223 MVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEECCEEeeeCChhhcc
Confidence 999999999999987754
No 469
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=363.54 Aligned_cols=213 Identities=22% Similarity=0.374 Sum_probs=171.3
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.++. .+.++|+|+|++|++||.++|+|+||||||||+++|+|.+.|+ +|+|.+||.++.+.. .++.++
T Consensus 345 ~~vsf~y~~-~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~ 420 (582)
T PRK11176 345 RNVTFTYPG-KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVA 420 (582)
T ss_pred EEEEEecCC-CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhce
Confidence 345555432 2356999999999999999999999999999999999999876 999999999886653 356799
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC--
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-- 161 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg-- 161 (1065)
||+|++.+|+ .|++|||.++.. ..++ +++++++++..|
T Consensus 421 ~v~Q~~~lf~-~Ti~~Ni~~~~~-----~~~~----------------------------------~~~i~~al~~~~l~ 460 (582)
T PRK11176 421 LVSQNVHLFN-DTIANNIAYART-----EQYS----------------------------------REQIEEAARMAYAM 460 (582)
T ss_pred EEccCceeec-chHHHHHhcCCC-----CCCC----------------------------------HHHHHHHHHHhCcH
Confidence 9999999886 599999987421 0000 001222222222
Q ss_pred -----CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEec
Q 001507 162 -----LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLL 236 (1065)
Q Consensus 162 -----L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~ 236 (1065)
|++..||.+|+++ .+||||||||++||||++++|+|++||||||+||+.++..+.+.|+++.. ++|+++++
T Consensus 461 ~~i~~lp~Gldt~ig~~g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~---~~tvI~Vt 536 (582)
T PRK11176 461 DFINKMDNGLDTVIGENG-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK---NRTSLVIA 536 (582)
T ss_pred HHHHhcccccCceeCCCC-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC---CCEEEEEe
Confidence 5677899999865 57999999999999999999999999999999999999999999988642 35666678
Q ss_pred CCchHHHhhcccEEEecCCcEEEEcCcchHHH
Q 001507 237 QPAPEAYELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 237 ~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
|..+ ..+.||+|++|++|++++.|+++++.+
T Consensus 537 Hr~~-~~~~~D~Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 537 HRLS-TIEKADEILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred cchH-HHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 8875 456799999999999999999988864
No 470
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=311.91 Aligned_cols=194 Identities=21% Similarity=0.300 Sum_probs=164.2
Q ss_pred cceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCH
Q 001507 711 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 711 ~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
..+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|. +++++|...+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCE----------EeEEecccCCCCCCcH
Confidence 45689999999999999999999999999999999999877 56899999985 3567777777778999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
.||+.+...... ...++..+.++++++.+++.+..+... ..||||||||++||++|+.+|++|||||||+||
T Consensus 103 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCMG---FKRKEIKAMTPKIIEFSELGEFIYQPV-----KKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhcCCc-----ccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 999987543321 223344455677888888877665543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 871 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
|+.++..+.+.|+++++.|+|||+++|++. .+.+.+|++++|. +|+++..|+..
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~ 228 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIE-GGKLKDYGELD 228 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEE-CCEEEEeCCHH
Confidence 999999999999999777999999999976 5677899999998 58999888753
No 471
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=319.42 Aligned_cols=217 Identities=24% Similarity=0.321 Sum_probs=170.8
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC--ceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~--~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|.+.|.. ..+|+|.++|.++... ..+
T Consensus 8 ~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T PRK14272 8 QDVNIYYG---DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMR 84 (252)
T ss_pred eeeEEEEC---CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhh
Confidence 45555543 3469999999999999999999999999999999999987532 1489999999876431 224
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++.+|++||+.++....+.. ..+ ...+.++++++.
T Consensus 85 ~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~-~~~--------------------------------~~~~~~~~~l~~ 131 (252)
T PRK14272 85 RRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIR-DRD--------------------------------HLMEVAERSLRG 131 (252)
T ss_pred ceeEEEeccCccCcCCCHHHHHHHHHHhcCCC-CHH--------------------------------HHHHHHHHHHHH
Confidence 56999999999899899999998754321100 000 001124445555
Q ss_pred hCCc----ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEe
Q 001507 160 LGLD----TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 235 (1065)
Q Consensus 160 lgL~----~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~ 235 (1065)
+++. +..++ .++.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ +++|+++
T Consensus 132 ~~l~~~l~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~ 203 (252)
T PRK14272 132 AALWDEVKDRLKT-----PATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK---VTTIIIV 203 (252)
T ss_pred cCcchhhhhhhcC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEE
Confidence 5543 22333 3457999999999999999999999999999999999999999999998853 3677789
Q ss_pred cCCchHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 236 LQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 236 ~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+|+.+++.++||++++|++|++++.|+++++.
T Consensus 204 sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 204 THNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred eCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999987764
No 472
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.2e-34 Score=315.24 Aligned_cols=208 Identities=24% Similarity=0.291 Sum_probs=162.4
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcc---c-ccceEEEEcCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSPG 787 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~~~v~q~~~~~~~ 787 (1065)
++.+|+|+|++|++|++++|+||||||||||+++|+|..+..+.+|+|.++|.++... . .++.++|++|++.+++.
T Consensus 13 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (248)
T PRK09580 13 DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGIFMAFQYPVEIPG 92 (248)
T ss_pred CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcceEEEecCchhccc
Confidence 4579999999999999999999999999999999999842115689999999876321 1 23469999999988888
Q ss_pred CCHHHHHHHHhh-ccC--CCC-CCHHHHHHHHHHHHHHcCCC-ccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 788 LTVLESLLFSAW-LRL--PSE-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 788 ltv~e~l~~~~~-~~~--~~~-~~~~~~~~~~~~~l~~l~l~-~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
+|+.+++.+... ++. ... .......+.++++++.+++. +..+... ...||||||||++|||||+.+|++|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~~LS~G~~qrv~laral~~~p~ill 168 (248)
T PRK09580 93 VSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NVGFSGGEKKRNDILQMAVLEPELCI 168 (248)
T ss_pred hhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 887776653211 110 000 11112345677888888884 3344322 13699999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHh-cCeEEEEecCcEEEEeCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|. +|++++.|+.
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~-~g~i~~~g~~ 230 (248)
T PRK09580 169 LDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLY-QGRIVKSGDF 230 (248)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEE-CCeEEEeCCH
Confidence 99999999999999999999999877899999999976 34444 79999997 5899999875
No 473
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=319.13 Aligned_cols=221 Identities=20% Similarity=0.258 Sum_probs=172.5
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC--ceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~--~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.+++ +.+|+|+|++|++|++++|+||||||||||+++|+|.+.|.. +.+|+|.++|.++... ..
T Consensus 7 ~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~ 83 (251)
T PRK14249 7 IRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNL 83 (251)
T ss_pred EEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHh
Confidence 3456555532 469999999999999999999999999999999999987641 2369999999876431 22
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++. ||+||+.++....+... . ...+..++++++
T Consensus 84 ~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~ 129 (251)
T PRK14249 84 RKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTTA--Q-------------------------------SRLDEVVEKSLR 129 (251)
T ss_pred hceEEEEecCCccCcC-cHHHHHhhHHHhcCCCh--h-------------------------------hHHHHHHHHHHH
Confidence 4679999999988875 99999988643221100 0 000122555667
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+||.+...... ++.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++. . +.+|++++|+
T Consensus 130 ~~~l~~~l~~~~-~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~--~~tilivsh~ 205 (251)
T PRK14249 130 QAALWDEVKDNL-HKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-Q--NYTIAIVTHN 205 (251)
T ss_pred HhCCchhhhhHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c--CCEEEEEeCC
Confidence 777643211111 23456799999999999999999999999999999999999999999999874 2 4677779999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++.++||++++|++|++++.|+++++.
T Consensus 206 ~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 206 MQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999999999999987763
No 474
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=313.95 Aligned_cols=219 Identities=25% Similarity=0.272 Sum_probs=171.4
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCC---eeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~---~~~G~i~i~g 763 (1065)
.+.++++++.+ +++.+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 16 ~l~~~~l~~~~-------------~~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g 82 (265)
T PRK14252 16 KSEVNKLNFYY-------------GGYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHP 82 (265)
T ss_pred eEEEEEEEEEE-------------CCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcC
Confidence 36667776544 3457999999999999999999999999999999999986521 2689999999
Q ss_pred ccCC-------cccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCC
Q 001507 764 YPKR-------QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPG 836 (1065)
Q Consensus 764 ~~~~-------~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~ 836 (1065)
.+.. ...+++.++|++|++.+++. |++||+.+....... ......++.++++++.+++.+....... ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~ 158 (265)
T PRK14252 83 DNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGV--KRRSILEERVENALRNAALWDEVKDRLG-DL 158 (265)
T ss_pred ccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCC--ChHHHHHHHHHHHHHHcCCchhhhHHHh-CC
Confidence 7642 12345679999999988876 999999876432211 1112223456778888877421111111 12
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecC
Q 001507 837 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 916 (1065)
Q Consensus 837 ~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 916 (1065)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|. +
T Consensus 159 ~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~l~-~ 235 (265)
T PRK14252 159 AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAYMY-M 235 (265)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEEEE-C
Confidence 357999999999999999999999999999999999999999999999865 699999999986 5778899999998 5
Q ss_pred cEEEEeCCC
Q 001507 917 GELIYAGPL 925 (1065)
Q Consensus 917 g~~~~~g~~ 925 (1065)
|+++..|+.
T Consensus 236 G~i~~~g~~ 244 (265)
T PRK14252 236 GELIEFGAT 244 (265)
T ss_pred CEEEEeCCH
Confidence 899988874
No 475
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=5.5e-35 Score=316.45 Aligned_cols=200 Identities=27% Similarity=0.400 Sum_probs=167.1
Q ss_pred cccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC---CceEEEEccccccCCCCCH
Q 001507 21 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTV 97 (1065)
Q Consensus 21 iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~---~~~~~yv~Q~~~~~~~lTv 97 (1065)
+|+|+||++++|++++|+||||||||||+++|+|.++ . +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999873 2 8999999987754321 3458999999887888999
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCccccc
Q 001507 98 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 177 (1065)
Q Consensus 98 ~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~ 177 (1065)
+||+.+..... . + .......++++++.+||.+..++.+ +.
T Consensus 87 ~~nl~~~~~~~-~----~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (248)
T PRK03695 87 FQYLTLHQPDK-T----R------------------------------TEAVASALNEVAEALGLDDKLGRSV-----NQ 126 (248)
T ss_pred HHHHHhcCccC-C----C------------------------------cHHHHHHHHHHHHHcCCHhHhcCCc-----cc
Confidence 99998752110 0 0 0001224778899999987666554 46
Q ss_pred CchhhhhhHHHHHHHhc-------CCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEE
Q 001507 178 ISGGQKKRLTTGELLVG-------PARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 250 (1065)
Q Consensus 178 LSGGqkqRv~ia~al~~-------~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~ 250 (1065)
||||||||++|||||+. +|++++|||||+|||+.++..+.+.|+++++ .+++|++++|+.+++..+||+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~--~~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ--QGIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 6799999999999999999999999999864 25677789999999999999999
Q ss_pred EecCCcEEEEcCcchH
Q 001507 251 LLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 251 ~l~~G~i~~~G~~~~~ 266 (1065)
+|++|++++.|+.+++
T Consensus 205 ~l~~G~i~~~g~~~~~ 220 (248)
T PRK03695 205 LLKQGKLLASGRRDEV 220 (248)
T ss_pred EEECCEEEEECCHHHH
Confidence 9999999999987665
No 476
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.7e-35 Score=362.04 Aligned_cols=210 Identities=22% Similarity=0.284 Sum_probs=171.3
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.++. +.++|+|+|+++++||.++|+|+||||||||+++|+|++.|. +|+|.+||.++.+.. .++.++
T Consensus 344 ~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~ 418 (592)
T PRK10790 344 DNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVA 418 (592)
T ss_pred EEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheE
Confidence 455555532 246999999999999999999999999999999999999886 999999999887543 357899
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhC--
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-- 161 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lg-- 161 (1065)
||+|++.+|+. |++|||.++.. ... +.++++++..|
T Consensus 419 ~v~Q~~~lF~~-Ti~~NI~~~~~-----~~d------------------------------------~~i~~a~~~~gl~ 456 (592)
T PRK10790 419 MVQQDPVVLAD-TFLANVTLGRD-----ISE------------------------------------EQVWQALETVQLA 456 (592)
T ss_pred EEccCCccccc-hHHHHHHhCCC-----CCH------------------------------------HHHHHHHHHcCcH
Confidence 99999998886 99999988521 000 01233333333
Q ss_pred -----CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEec
Q 001507 162 -----LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLL 236 (1065)
Q Consensus 162 -----L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~ 236 (1065)
|++..||.+|+.+ .+||||||||++||||++.+|+|++||||||+||+.+...+.+.|+++.. + +|+++++
T Consensus 457 ~~i~~lp~Gldt~i~e~g-~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~-~tvIivt 532 (592)
T PRK10790 457 ELARSLPDGLYTPLGEQG-NNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--H-TTLVVIA 532 (592)
T ss_pred HHHHhccccccccccCCC-CCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEe
Confidence 5567899999854 57999999999999999999999999999999999999999999998753 3 4555577
Q ss_pred CCchHHHhhcccEEEecCCcEEEEcCcchHHH
Q 001507 237 QPAPEAYELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 237 ~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
|..+. ...||+|++|++|++++.|+++++.+
T Consensus 533 Hr~~~-l~~~D~ii~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 533 HRLST-IVEADTILVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred cchHH-HHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 77654 45699999999999999999998864
No 477
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=323.10 Aligned_cols=218 Identities=20% Similarity=0.284 Sum_probs=168.8
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC--ceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~--~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++ ...+|+|+||+|++||+++|+|||||||||||++|+|.+.+.. +.+|+|.++|.++... ..+
T Consensus 17 ~nl~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~ 93 (269)
T PRK14259 17 QNVTISYG---TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVR 93 (269)
T ss_pred EeEEEEEC---CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHh
Confidence 34444443 2469999999999999999999999999999999999976311 3599999999876421 123
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++ .||+||+.++....+.. . ..+..++++++.
T Consensus 94 ~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~---~--------------------------------~~~~~~~~~l~~ 137 (269)
T PRK14259 94 RRIGMVFQQPNPFP-KSIYENIAFGARINGYT---G--------------------------------DMDELVERSLRK 137 (269)
T ss_pred hceEEEccCCccch-hhHHHHHhhhhhhcCCc---H--------------------------------HHHHHHHHHHHH
Confidence 56999999998887 49999998865322100 0 001125566777
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+++....+... ++.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ +.+|++++|+.
T Consensus 138 ~~l~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiiivtH~~ 213 (269)
T PRK14259 138 AAVWDECKDKL-NESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK---NFTIVIVTHNM 213 (269)
T ss_pred hCCcchhhhhh-CCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCH
Confidence 77642111111 234457999999999999999999999999999999999999999999998843 36777799999
Q ss_pred hHHHhhcccEEEecC-----------CcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSE-----------GQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~-----------G~i~~~G~~~~~~ 267 (1065)
+++..+||++++|++ |++++.|+++++.
T Consensus 214 ~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 214 QQAVRVSDMTAFFNAEEVEGGSGGKVGYLVEFNETKKIF 252 (269)
T ss_pred HHHHHhcCEEEEEeccccccccccccceEEEeCCHHHHH
Confidence 999999999999996 6689999988774
No 478
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.1e-35 Score=370.89 Aligned_cols=217 Identities=23% Similarity=0.321 Sum_probs=169.9
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.++.. +.++|+|+|++|++||.++|+||||||||||+++|+|.+.|. +|+|.+||.++.+.. .++.++
T Consensus 481 ~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~ 556 (710)
T TIGR03796 481 RNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVA 556 (710)
T ss_pred EEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhhee
Confidence 4555555432 346999999999999999999999999999999999999876 999999999886653 467899
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD 163 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~ 163 (1065)
||+|++++|. .|++|||.++.. ....+.+.++++. . .+++.++ .++
T Consensus 557 ~v~Q~~~lf~-gTi~eNi~l~~~----~~~~~~i~~al~~------------------~---------~l~~~i~--~lp 602 (710)
T TIGR03796 557 MVDQDIFLFE-GTVRDNLTLWDP----TIPDADLVRACKD------------------A---------AIHDVIT--SRP 602 (710)
T ss_pred EEecCChhhh-ccHHHHhhCCCC----CCCHHHHHHHHHH------------------h---------CCHHHHH--hCc
Confidence 9999999876 599999986411 0000111111100 0 0111111 356
Q ss_pred ccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHH
Q 001507 164 TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 243 (1065)
Q Consensus 164 ~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~ 243 (1065)
...||.+|+++ .+||||||||++||||++++|+|++||||||+||+.++..+.+.|++ . ++|+|+++|..+.+
T Consensus 603 ~gl~t~i~e~G-~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~-~~T~IiitHrl~~i- 675 (710)
T TIGR03796 603 GGYDAELAEGG-ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----R-GCTCIIVAHRLSTI- 675 (710)
T ss_pred CcccceeccCC-CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----c-CCEEEEEecCHHHH-
Confidence 67899999865 58999999999999999999999999999999999999999999975 2 35566678887665
Q ss_pred hhcccEEEecCCcEEEEcCcchHHH
Q 001507 244 ELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 244 ~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
..||+|++|++|++++.|+++++.+
T Consensus 676 ~~~D~Iivl~~G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 676 RDCDEIIVLERGKVVQRGTHEELWA 700 (710)
T ss_pred HhCCEEEEEeCCEEEEecCHHHHHH
Confidence 4599999999999999999998864
No 479
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=4.7e-35 Score=301.72 Aligned_cols=160 Identities=24% Similarity=0.455 Sum_probs=142.4
Q ss_pred EeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc----ccccceEEEEcCCC---CCCCC
Q 001507 715 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPG 787 (1065)
Q Consensus 715 il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~~v~q~~---~~~~~ 787 (1065)
+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++ .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 8999999999999999999999999999999999877 568999999987643 22456799999984 57788
Q ss_pred CCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCC
Q 001507 788 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 867 (1065)
Q Consensus 788 ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPt 867 (1065)
+|++||+.+... ||+|||||++|||||+.+|++|+|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999976310 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcE
Q 001507 868 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 918 (1065)
Q Consensus 868 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~ 918 (1065)
+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~-G~ 181 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYE-GR 181 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecC-Cc
Confidence 999999999999999999777899999999976 57788999999985 54
No 480
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=321.86 Aligned_cols=221 Identities=21% Similarity=0.274 Sum_probs=171.8
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCc--eeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQ--VSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~--~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.++ +..+|+|+|+++++||+++|+|+||||||||+++|+|.+++..+ .+|+|.++|.++... ..
T Consensus 10 ~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 86 (259)
T PRK14260 10 VKDLSFYYN---TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRL 86 (259)
T ss_pred EEEEEEEEC---CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhh
Confidence 345555543 24699999999999999999999999999999999999875322 489999999876431 12
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++ .||+||+.++........ + ...+..++++++
T Consensus 87 ~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~-------------------~--------------~~~~~~~~~~l~ 132 (259)
T PRK14260 87 RRQIGMVFQRPNPFP-MSIYENVAYGVRISAKLP-------------------Q--------------ADLDEIVESALK 132 (259)
T ss_pred hhheEEEecccccCC-ccHHHHHHHHHHHhcCCC-------------------H--------------HHHHHHHHHHHH
Confidence 357999999998887 899999987643221000 0 001123566777
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.+|+....... -++.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+
T Consensus 133 ~~~l~~~l~~~-~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~ 208 (259)
T PRK14260 133 GAALWQEVKDK-LNKSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS--E-LTIAIVTHN 208 (259)
T ss_pred HcCCcchhhhH-hcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCC
Confidence 88774211111 1234557999999999999999999999999999999999999999999998753 3 677779999
Q ss_pred chHHHhhcccEEEec-----CCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLS-----EGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~-----~G~i~~~G~~~~~~ 267 (1065)
.+++.++||++++|+ +|++++.|++.++.
T Consensus 209 ~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 209 MQQATRVSDFTAFFSTDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred HHHHHHhcCeEEEEeccCCCCceEEEeCCHHHHh
Confidence 999999999999997 59999999988763
No 481
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-35 Score=318.74 Aligned_cols=221 Identities=22% Similarity=0.324 Sum_probs=172.0
Q ss_pred HHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCC--CCceeEEEEECCccCCCC-----CC
Q 001507 6 LRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VP 78 (1065)
Q Consensus 6 ~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~--~~~~~G~i~~~g~~~~~~-----~~ 78 (1065)
++++++.++. +.+|+|+|++|++||+++|+|+||||||||+++|+|.+.+ ..+.+|+|.++|.++... ..
T Consensus 7 ~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~ 83 (251)
T PRK14251 7 AKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVEL 83 (251)
T ss_pred EEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHh
Confidence 4556665532 4699999999999999999999999999999999999862 113599999999876431 12
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++.+++ .||+||+.++....+... .+ ..+..++++++
T Consensus 84 ~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~--------------------~~-------------~~~~~~~~~l~ 129 (251)
T PRK14251 84 RKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGVKD--------------------KE-------------LIDQRVEESLK 129 (251)
T ss_pred hccEEEEecCCccCC-CcHHHHHHHHHHHcCCCC--------------------HH-------------HHHHHHHHHHH
Confidence 456999999998776 799999987543211000 00 00123567788
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQP 238 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~ 238 (1065)
.++|........ ++...+||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+ +++|++++|+
T Consensus 130 ~~~l~~~~~~~~-~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiiiisH~ 205 (251)
T PRK14251 130 QAAIWKETKDNL-DRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH---QYTFIMVTHN 205 (251)
T ss_pred HcCCCcchHHHh-ccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc---CCeEEEEECC
Confidence 888842110001 234467999999999999999999999999999999999999999999998743 3677789999
Q ss_pred chHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 239 APEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 239 ~~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
.+++.+++|++++|++|+++..|+.+++.
T Consensus 206 ~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 206 LQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999887663
No 482
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=322.13 Aligned_cols=221 Identities=23% Similarity=0.321 Sum_probs=171.7
Q ss_pred eEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCC---CeeEEEEEECC
Q 001507 687 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 763 (1065)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~---~~~~G~i~i~g 763 (1065)
.+.++|+++.+ +++.+|+++||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~-------------~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYY-------------GDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEe-------------CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 35666666544 345799999999999999999999999999999999998641 14689999999
Q ss_pred ccCCc-----ccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCC---------CC-CHHHHHHHHHHHHHHcCCCccc
Q 001507 764 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPS---------EI-ELETQRAFVEEVMELVELTSLS 828 (1065)
Q Consensus 764 ~~~~~-----~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~---------~~-~~~~~~~~~~~~l~~l~l~~~~ 828 (1065)
.++.. ...++.++|++|++.+++ .||+||+.+....+... .. ......+.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 234567999999988877 49999999864321100 01 1122345678888888874321
Q ss_pred cCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcC
Q 001507 829 GALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFD 908 (1065)
Q Consensus 829 ~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 908 (1065)
..... ..+..||||||||++|||||+.+|+||||||||+|||+.++..+.+.|+++++ +.|||++||+++ .+.+.+|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12368999999999999999999999999999999999999999999999876 589999999986 5677899
Q ss_pred eEE-EEecCcEEEEeCCC
Q 001507 909 ELL-FMKRGGELIYAGPL 925 (1065)
Q Consensus 909 ~~~-~l~~gg~~~~~g~~ 925 (1065)
+++ +|. +|+++..|+.
T Consensus 268 ~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLT-GGELVEYDDT 284 (305)
T ss_pred EEEEEec-CCEEEEeCCH
Confidence 975 566 5899999875
No 483
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-35 Score=314.82 Aligned_cols=197 Identities=26% Similarity=0.382 Sum_probs=156.4
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~lt 789 (1065)
+.+++|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++. |
T Consensus 16 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~-t 92 (229)
T cd03254 16 KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDIRDISRKSLRSMIGVVLQDTFLFSG-T 92 (229)
T ss_pred CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeHHHcCHHHHhhhEEEecCCchhhhh-H
Confidence 459999999999999999999999999999999999876 568999999986532 2345679999999887775 9
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcc------cCCCCCCCCHHHHHHHHHHHHHHhCCCceee
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALI------GLPGINGLSTEQRKRLTIAVELVANPSIVFM 863 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~------~~~~~~~lSgGqrqr~~ia~~l~~~p~il~l 863 (1065)
++||+.+... .... ..+++.++.+++.+..+... .......|||||||||+|||+|+.+|++|+|
T Consensus 93 v~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~llll 163 (229)
T cd03254 93 IMENIRLGRP-----NATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILIL 163 (229)
T ss_pred HHHHHhccCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999976421 1111 12344444444433322211 0112468999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 864 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 864 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||||+|||+.++..+++.|+++. +|+|||++||+++ .+ ..+|++++|. +|++++.|+.
T Consensus 164 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~-~g~~~~~~~~ 221 (229)
T cd03254 164 DEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLD-DGKIIEEGTH 221 (229)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEe-CCeEEEeCCH
Confidence 99999999999999999999985 5899999999986 34 5699999998 5788887763
No 484
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.8e-35 Score=319.38 Aligned_cols=218 Identities=24% Similarity=0.348 Sum_probs=164.6
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.+++..++.+|+|+||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++
T Consensus 4 ~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 4 KNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPT---SGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred EEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCC---CCEEEECCEehhhcCHHHHHhhEE
Confidence 34555444323356999999999999999999999999999999999998775 999999998764322 234699
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh--C
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL--G 161 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l--g 161 (1065)
|++|++.+++ .||+||+.+..... ..+ +..... +. ..+.+.++.+ +
T Consensus 81 ~~~q~~~~~~-~tv~e~l~~~~~~~----~~~---~~~~~~---------------~~---------~~~~~~~~~l~~~ 128 (238)
T cd03249 81 LVSQEPVLFD-GTIAENIRYGKPDA----TDE---EVEEAA---------------KK---------ANIHDFIMSLPDG 128 (238)
T ss_pred EECCchhhhh-hhHHHHhhccCCCC----CHH---HHHHHH---------------HH---------cChHHHHHhhccc
Confidence 9999988776 69999998743211 000 000000 00 0022233333 3
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
+....+ ..++.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++. .+++|++++|+.++
T Consensus 129 ~~~~~~-----~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~---~g~~vi~~sh~~~~ 200 (238)
T cd03249 129 YDTLVG-----ERGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM---KGRTTIVIAHRLST 200 (238)
T ss_pred cceeec-----cCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc---CCCEEEEEeCCHHH
Confidence 433332 2346799999999999999999999999999999999999999999999874 25667778899998
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
+. .||++++|++|++++.|+.+++.+
T Consensus 201 ~~-~~d~v~~l~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 201 IR-NADLIAVLQNGQVVEQGTHDELMA 226 (238)
T ss_pred Hh-hCCEEEEEECCEEEEeCCHHHHhh
Confidence 86 899999999999999998776654
No 485
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.4e-35 Score=357.22 Aligned_cols=211 Identities=27% Similarity=0.441 Sum_probs=175.4
Q ss_pred eeEEEeceeEEEecccccccccccccceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCcc
Q 001507 686 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 765 (1065)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~ 765 (1065)
..++|+|+++.++ +++++|+|+||+++|||++||+||||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~------------~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYP------------GKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcC------------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCEe
Confidence 4588999988763 15689999999999999999999999999999999999877 568999999988
Q ss_pred CC---cccccceEEEEcCCCCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCC-------ccccCcccCC
Q 001507 766 KR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-------SLSGALIGLP 835 (1065)
Q Consensus 766 ~~---~~~~~~~~~~v~q~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~-------~~~~~~~~~~ 835 (1065)
+. ...+++.++||+|++.+|. -|++||+.++. + +.+. +.++++++..++. +-.|+.+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~----~-~at~----eei~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR----P-DATD----EEIEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC----C-CCCH----HHHHHHHHHhChHHHHHhCcccccceecCC
Confidence 64 3567889999999999987 69999999862 1 1222 2344555444332 2356777633
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEec
Q 001507 836 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 915 (1065)
Q Consensus 836 ~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 915 (1065)
...||||||||++||||++++|+||+||||||+||+.+...|++.++++. +++|+|+++|+++ ....+|+|++|++
T Consensus 463 -G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 463 -GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999876 6789999999986 3456999999984
Q ss_pred CcEEEEeCCC
Q 001507 916 GGELIYAGPL 925 (1065)
Q Consensus 916 gg~~~~~g~~ 925 (1065)
|++++.|+.
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 799999986
No 486
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=327.96 Aligned_cols=192 Identities=20% Similarity=0.304 Sum_probs=161.3
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCCCCHHH
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 792 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~ltv~e 792 (1065)
+.+|+|+||+|++|+++||+||||||||||+++|+|..+ +.+|+|.++|.+. ++.+...+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 569999999999999999999999999999999999876 5689999999641 1222344567789999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCCCH
Q 001507 793 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 872 (1065)
Q Consensus 793 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgLD~ 872 (1065)
|+.+...... ....+..+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|||||||+|||+
T Consensus 105 nL~l~~~~~~---~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMMG---LTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhcC---CCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 9987543321 223344456778999999987766543 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCCC
Q 001507 873 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 926 (1065)
Q Consensus 873 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~~ 926 (1065)
.++..+++.|++++++|+|||++||+++ .+...||++++|. +|++++.|++.
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~-~GkIv~~G~~~ 228 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLH-YGQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 9999999999998777999999999986 5778899999998 58999998763
No 487
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.2e-35 Score=305.36 Aligned_cols=183 Identities=22% Similarity=0.287 Sum_probs=154.9
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc--ccccceEEEEcCCCCCCCCCC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~~v~q~~~~~~~lt 789 (1065)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|+..+++.+|
T Consensus 13 ~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 90 (200)
T PRK13540 13 DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIKKDLCTYQKQLCFVGHRSGINPYLT 90 (200)
T ss_pred CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccccCHHHHHhheEEeccccccCcCCC
Confidence 4579999999999999999999999999999999999877 568999999987642 235567999999988888999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
|+||+.+..... . . ...++++++.+++.+..+... ..||+|||||++|||+|+.+|++|+|||||+|
T Consensus 91 v~~~~~~~~~~~--~----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~~lilDEP~~~ 157 (200)
T PRK13540 91 LRENCLYDIHFS--P----G--AVGITELCRLFSLEHLIDYPC-----GLLSSGQKRQVALLRLWMSKAKLWLLDEPLVA 157 (200)
T ss_pred HHHHHHHHHhcC--c----c--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 999998864211 1 1 235788999999876655443 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEE
Q 001507 870 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL 911 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~ 911 (1065)
||+.++..+.+.|++++++|.|||++||++. ....+|..+
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 158 LDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred cCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 9999999999999998777999999999975 345566543
No 488
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.3e-35 Score=317.12 Aligned_cols=216 Identities=26% Similarity=0.379 Sum_probs=164.7
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.++.. ...+|+|+|+++++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++
T Consensus 4 ~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 4 EHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred EEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEE
Confidence 3445444321 246999999999999999999999999999999999999775 999999998764321 245699
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh--C
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL--G 161 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l--g 161 (1065)
|++|++.+++ .||+||+.+... . ...+...+.. + ....++.++.+ +
T Consensus 80 ~~~q~~~~~~-~tv~~nl~~~~~--~--~~~~~~~~~~------------------~---------~~~~~~~l~~l~~~ 127 (237)
T cd03252 80 VVLQENVLFN-RSIRDNIALADP--G--MSMERVIEAA------------------K---------LAGAHDFISELPEG 127 (237)
T ss_pred EEcCCchhcc-chHHHHhhccCC--C--CCHHHHHHHH------------------H---------HcCcHHHHHhCccc
Confidence 9999998765 699999977421 0 0000000000 0 00123444444 4
Q ss_pred CcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchH
Q 001507 162 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 241 (1065)
Q Consensus 162 L~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~ 241 (1065)
+....+. .+.+|||||||||+||||++.+|++++|||||+|||+.++..+.+.|++++ . +.+|++++|+.++
T Consensus 128 ~~~~~~~-----~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~--~~tiii~sH~~~~ 199 (237)
T cd03252 128 YDTIVGE-----QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-A--GRTVIIIAHRLST 199 (237)
T ss_pred ccchhhc-----CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-C--CCEEEEEeCCHHH
Confidence 4433333 345799999999999999999999999999999999999999999999885 2 4667778999998
Q ss_pred HHhhcccEEEecCCcEEEEcCcchHH
Q 001507 242 AYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 242 ~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+. .||++++|++|++++.|+++++.
T Consensus 200 ~~-~~d~v~~l~~G~i~~~~~~~~~~ 224 (237)
T cd03252 200 VK-NADRIIVMEKGRIVEQGSHDELL 224 (237)
T ss_pred HH-hCCEEEEEECCEEEEEcCHHHHH
Confidence 85 69999999999999999987764
No 489
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-35 Score=273.66 Aligned_cols=214 Identities=28% Similarity=0.336 Sum_probs=175.1
Q ss_pred HHHHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCC--CC------
Q 001507 5 LLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFK--EF------ 76 (1065)
Q Consensus 5 ~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~--~~------ 76 (1065)
.++++.++++.. ++|-||+++.++|+.+.++||||+|||||++.|.=+.-| .+|+..+.|...+ +.
T Consensus 4 rv~~in~~yg~~---q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p---~sg~l~ia~~~fd~s~~~~~k~i 77 (242)
T COG4161 4 QLNGINCFYGAH---QALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMP---RSGTLNIAGNHFDFSKTPSDKAI 77 (242)
T ss_pred EEcccccccccc---hheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCC---CCCeEEecccccccccCccHHHH
Confidence 356677777643 589999999999999999999999999999999754444 4999998875432 11
Q ss_pred -CCCceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHH
Q 001507 77 -VPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY 155 (1065)
Q Consensus 77 -~~~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 155 (1065)
..++.+|+|+|+-.++|++||.||+.-+. ++ .+.+.+.+...++.+
T Consensus 78 ~~lr~~vgmvfqqy~lwphltv~enlieap-~k--------------------------------v~gl~~~qa~~~a~e 124 (242)
T COG4161 78 RDLRRNVGMVFQQYNLWPHLTVQENLIEAP-CR--------------------------------VLGLSKDQALARAEK 124 (242)
T ss_pred HHHHHhhhhhhhhhccCchhHHHHHHHhhh-HH--------------------------------HhCCCHHHHHHHHHH
Confidence 13467999999999999999999996532 11 011122233445788
Q ss_pred HHHHhCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEe
Q 001507 156 IMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 235 (1065)
Q Consensus 156 ~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~ 235 (1065)
+|+.+.|.+.+|.. +-.|||||+|||+|||||+.+|+||++||||++||++-..++++.+++++.. |.|-+++
T Consensus 125 llkrlrl~~~adr~-----plhlsggqqqrvaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~t--gitqviv 197 (242)
T COG4161 125 LLKRLRLKPYADRY-----PLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAET--GITQVIV 197 (242)
T ss_pred HHHHhccccccccC-----ceecccchhhhHHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhc--CceEEEE
Confidence 99999999988764 3469999999999999999999999999999999999999999999999863 5555668
Q ss_pred cCCchHHHhhcccEEEecCCcEEEEcCcc
Q 001507 236 LQPAPEAYELFDDVILLSEGQIVYQGPRV 264 (1065)
Q Consensus 236 ~~~~~~~~~~~D~v~~l~~G~i~~~G~~~ 264 (1065)
+|..+.+...+.+|+.|.+|+|++.|+.+
T Consensus 198 thev~va~k~as~vvyme~g~ive~g~a~ 226 (242)
T COG4161 198 THEVEVARKTASRVVYMENGHIVEQGDAS 226 (242)
T ss_pred EeehhHHHhhhhheEeeecCeeEeecchh
Confidence 99999999999999999999999999864
No 490
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-35 Score=278.15 Aligned_cols=196 Identities=24% Similarity=0.365 Sum_probs=167.4
Q ss_pred cceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCCC---CceEEEEccccccCC
Q 001507 17 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVA 93 (1065)
Q Consensus 17 ~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~---~~~~~yv~Q~~~~~~ 93 (1065)
....+|+++||.+.+||..+|.||||||||||+|+++.+.+|+ +|++++.|+++....+ +.+++||.|.+.+|+
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~---~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg 90 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPT---SGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFG 90 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCC---CceEEEcCccccccChHHHHHHHHHHHcCccccc
Confidence 3457999999999999999999999999999999999999876 9999999999877643 568999999999998
Q ss_pred CCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCcccccccccCc
Q 001507 94 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 173 (1065)
Q Consensus 94 ~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~ 173 (1065)
. ||++|+.|..+.+.... + .......|+.++|++..- ++
T Consensus 91 ~-tVeDNlifP~~~r~rr~--d----------------------------------r~aa~~llar~~l~~~~L----~k 129 (223)
T COG4619 91 D-TVEDNLIFPWQIRNRRP--D----------------------------------RAAALDLLARFALPDSIL----TK 129 (223)
T ss_pred c-chhhccccchHHhccCC--C----------------------------------hHHHHHHHHHcCCchhhh----cc
Confidence 6 99999999766542111 0 122556788888876321 23
Q ss_pred ccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcccEEEec
Q 001507 174 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 253 (1065)
Q Consensus 174 ~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D~v~~l~ 253 (1065)
.+..||||||||++|+|.|.-.|+||+||||||+||..+.+.|-+.+.++.+. ....++-++|+-++..+.||+++-+.
T Consensus 130 ~it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsALD~~nkr~ie~mi~~~v~~-q~vAv~WiTHd~dqa~rha~k~itl~ 208 (223)
T COG4619 130 NITELSGGEKQRIALIRNLQFMPKILLLDEITSALDESNKRNIEEMIHRYVRE-QNVAVLWITHDKDQAIRHADKVITLQ 208 (223)
T ss_pred hhhhccchHHHHHHHHHHhhcCCceEEecCchhhcChhhHHHHHHHHHHHhhh-hceEEEEEecChHHHhhhhheEEEec
Confidence 45579999999999999999999999999999999999999999999998764 46778889999999999999999999
Q ss_pred CCcE
Q 001507 254 EGQI 257 (1065)
Q Consensus 254 ~G~i 257 (1065)
.|++
T Consensus 209 ~G~~ 212 (223)
T COG4619 209 PGHA 212 (223)
T ss_pred cCcc
Confidence 9876
No 491
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.1e-35 Score=317.57 Aligned_cols=196 Identities=27% Similarity=0.378 Sum_probs=154.7
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc---ccccceEEEEcCCCCCCCCCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 789 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~~~v~q~~~~~~~lt 789 (1065)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 469999999999999999999999999999999999876 568999999987532 233457999999988776 69
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccC-------cccCCCCCCCCHHHHHHHHHHHHHHhCCCcee
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGA-------LIGLPGINGLSTEQRKRLTIAVELVANPSIVF 862 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-------~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~ 862 (1065)
|+||+.+....+ ... ..++.++..++.+..+. .. ...+..|||||||||+|||+|+.+|++|+
T Consensus 93 v~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLV-GERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceee-ccCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999998743211 111 12222333333221111 11 11236899999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 863 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 863 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|||||+|||+.++..+.+.|+++. +|+|||++||+++ ++ +.||++++|.+ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7999999999986 34 47999999985 789988874
No 492
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-35 Score=318.36 Aligned_cols=221 Identities=26% Similarity=0.357 Sum_probs=173.7
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC-----ceeEEEEECCccCCCCC---C
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-----QVSGKITYNGHGFKEFV---P 78 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~-----~~~G~i~~~g~~~~~~~---~ 78 (1065)
+++++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|.++.... .
T Consensus 5 ~nl~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (272)
T PRK13547 5 DHLHVARR---HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRL 81 (272)
T ss_pred EEEEEEEC---CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHH
Confidence 44555443 2469999999999999999999999999999999999987630 12899999998765432 2
Q ss_pred CceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHH
Q 001507 79 PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 158 (1065)
Q Consensus 79 ~~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~ 158 (1065)
++.++|++|++..++.+||+||+.++........ .. .. ......++++++
T Consensus 82 ~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~--~~-------------~~---------------~~~~~~~~~~l~ 131 (272)
T PRK13547 82 ARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRA--GA-------------LT---------------HRDGEIAWQALA 131 (272)
T ss_pred HhhcEEecccCCCCCCCcHHHHHhhccccccccc--cc-------------CC---------------HHHHHHHHHHHH
Confidence 3458999999866667899999987532100000 00 00 001223678899
Q ss_pred HhCCcccccccccCcccccCchhhhhhHHHHHHHh---------cCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCC
Q 001507 159 ILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLV---------GPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDG 229 (1065)
Q Consensus 159 ~lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~---------~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~ 229 (1065)
.+||++..++.+ ..|||||||||+|||||+ .+|++++|||||+|||+.++..+.+.|+++.+. .+
T Consensus 132 ~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~ 205 (272)
T PRK13547 132 LAGATALVGRDV-----TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARD-WN 205 (272)
T ss_pred HcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHh-cC
Confidence 999987665544 469999999999999999 599999999999999999999999999998653 25
Q ss_pred EEEEEecCCchHHHhhcccEEEecCCcEEEEcCcchH
Q 001507 230 TTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 230 ~~ii~~~~~~~~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
++|++++|+.+++.++||++++|++|++++.|+.+++
T Consensus 206 ~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (272)
T PRK13547 206 LGVLAIVHDPNLAARHADRIAMLADGAIVAHGAPADV 242 (272)
T ss_pred CEEEEEECCHHHHHHhCCEEEEEECCeEEEecCHHHH
Confidence 6777799999999999999999999999999987765
No 493
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=322.76 Aligned_cols=207 Identities=20% Similarity=0.332 Sum_probs=165.9
Q ss_pred eecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcC--CCCceeEEEEECCccCCCC-----CCCceEEEEcccccc
Q 001507 19 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 91 (1065)
Q Consensus 19 ~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~--~~~~~~G~i~~~g~~~~~~-----~~~~~~~yv~Q~~~~ 91 (1065)
..+|+|+||+|++||+++|+||||||||||+++|+|... |..+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 52 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 131 (286)
T PRK14275 52 FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKPNP 131 (286)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcEEEECCCCCC
Confidence 459999999999999999999999999999999999754 2112499999999876431 124579999999987
Q ss_pred CCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCCc----cccc
Q 001507 92 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCAD 167 (1065)
Q Consensus 92 ~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL~----~~~~ 167 (1065)
++. ||+||+.++....+.... ...+..+.++++.+|+. +..+
T Consensus 132 ~~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~ 177 (286)
T PRK14275 132 FPK-SIFDNIAYGPRLHGINDK---------------------------------KQLEEIVEKSLRKAALWDEVSDRLD 177 (286)
T ss_pred Ccc-CHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHhCCccchhhHhh
Confidence 774 999999886432211000 00112356677777774 2233
Q ss_pred ccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCchHHHhhcc
Q 001507 168 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 247 (1065)
Q Consensus 168 t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~D 247 (1065)
+ .+..|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++.+ +.+|++++|+.+++.++||
T Consensus 178 ~-----~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~---~~tvIivsH~~~~~~~~~d 249 (286)
T PRK14275 178 K-----NALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG---SYTIMIVTHNMQQASRVSD 249 (286)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCC
Confidence 3 3457999999999999999999999999999999999999999999998853 3677789999999999999
Q ss_pred cEEEecCCcEEEEcCcchHH
Q 001507 248 DVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 248 ~v~~l~~G~i~~~G~~~~~~ 267 (1065)
++++|++|++++.|+++++.
T Consensus 250 ~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 250 YTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999987763
No 494
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.6e-35 Score=357.23 Aligned_cols=212 Identities=26% Similarity=0.408 Sum_probs=172.0
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCCceeEEEEECCccCCCCC---CCceEE
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSA 83 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~---~~~~~~ 83 (1065)
+++++.+++. +.++|+|+|++++|||.++|+||||||||||+++|+|.+.|+ +|+|.+||.++.+.. .++.++
T Consensus 342 ~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~ 417 (574)
T PRK11160 342 NNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAIS 417 (574)
T ss_pred EEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhhee
Confidence 4455555322 246999999999999999999999999999999999999876 999999999887653 356799
Q ss_pred EEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHhCC-
Q 001507 84 YVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL- 162 (1065)
Q Consensus 84 yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~lgL- 162 (1065)
||+|++.+|+ .|++|||.++.. ... ++.+.++++..|+
T Consensus 418 ~v~Q~~~lf~-~ti~~Ni~~~~~----~~~------------------------------------~~~i~~al~~~~l~ 456 (574)
T PRK11160 418 VVSQRVHLFS-ATLRDNLLLAAP----NAS------------------------------------DEALIEVLQQVGLE 456 (574)
T ss_pred EEcccchhhc-ccHHHHhhcCCC----ccC------------------------------------HHHHHHHHHHcCCH
Confidence 9999999776 599999987521 000 1113344444444
Q ss_pred -----cccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecC
Q 001507 163 -----DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQ 237 (1065)
Q Consensus 163 -----~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~ 237 (1065)
++..||.+|+++ .+||||||||++||||++++|+|++||||||+||+.++..+.+.|++..+ ++|+++++|
T Consensus 457 ~~i~~p~GldT~vge~g-~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~---~~tviiitH 532 (574)
T PRK11160 457 KLLEDDKGLNAWLGEGG-RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ---NKTVLMITH 532 (574)
T ss_pred HHHcCccccCchhcCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC---CCEEEEEec
Confidence 456799999864 57999999999999999999999999999999999999999999998742 455656778
Q ss_pred CchHHHhhcccEEEecCCcEEEEcCcchHHH
Q 001507 238 PAPEAYELFDDVILLSEGQIVYQGPRVSVLD 268 (1065)
Q Consensus 238 ~~~~~~~~~D~v~~l~~G~i~~~G~~~~~~~ 268 (1065)
..+.+. .||+|++|++|++++.|+++++.+
T Consensus 533 r~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 533 RLTGLE-QFDRICVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred ChhHHH-hCCEEEEEeCCeEEEeCCHHHHHh
Confidence 877664 599999999999999999988864
No 495
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-35 Score=317.50 Aligned_cols=217 Identities=21% Similarity=0.265 Sum_probs=172.5
Q ss_pred HhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcCCCC--ceeEEEEECCccCCCC-----CCCc
Q 001507 8 QLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPR 80 (1065)
Q Consensus 8 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~~~~--~~~G~i~~~g~~~~~~-----~~~~ 80 (1065)
.++++++ +..+|+|+||++++||+++|+|+||||||||+++|+|++.|.. +.+|+|.++|.++... ..++
T Consensus 13 ~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 89 (261)
T PRK14263 13 LDKIFYG---NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRR 89 (261)
T ss_pred eEEEEeC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhh
Confidence 3444443 3569999999999999999999999999999999999987521 2489999999886431 2245
Q ss_pred eEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHHh
Q 001507 81 TSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL 160 (1065)
Q Consensus 81 ~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l 160 (1065)
.++|++|++.++ .+|++||+.++...... . ......++++++.+
T Consensus 90 ~i~~v~q~~~~~-~~tv~enl~~~~~~~~~----~-------------------------------~~~~~~~~~~l~~~ 133 (261)
T PRK14263 90 YIGMVFQQPNPF-SMSIFDNVAFGLRLNRY----K-------------------------------GDLGDRVKHALQGA 133 (261)
T ss_pred ceEEEecCCccc-cccHHHHHHHHHhhcCc----h-------------------------------HHHHHHHHHHHHHc
Confidence 699999999877 58999999886432210 0 00012367778888
Q ss_pred CCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCch
Q 001507 161 GLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 240 (1065)
Q Consensus 161 gL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~~ 240 (1065)
||.+..+... +...+.||||||||++|||||+.+|++++|||||+|||+.++.++++.|+++.+ ++++++++|+.+
T Consensus 134 ~l~~~i~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~---~~tii~isH~~~ 209 (261)
T PRK14263 134 ALWDEVKDKL-KVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKK---DYTIALVTHNMQ 209 (261)
T ss_pred CCchhhhhhh-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHH
Confidence 8864322222 234567999999999999999999999999999999999999999999998842 367777999999
Q ss_pred HHHhhcccEEEec--------CCcEEEEcCcchHH
Q 001507 241 EAYELFDDVILLS--------EGQIVYQGPRVSVL 267 (1065)
Q Consensus 241 ~~~~~~D~v~~l~--------~G~i~~~G~~~~~~ 267 (1065)
++.++||++++|+ +|++++.|+.+++.
T Consensus 210 ~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 210 QAIRVADTTAFFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred HHHHhCCEEEEEecccccccCCceEEEeCCHHHHH
Confidence 9999999999995 89999999987764
No 496
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.4e-34 Score=309.52 Aligned_cols=191 Identities=25% Similarity=0.297 Sum_probs=157.0
Q ss_pred eeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEEC--Cc--cCCc---cc----ccceEEEEcCC
Q 001507 713 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYIS--GY--PKRQ---ET----FARISGYCEQN 781 (1065)
Q Consensus 713 ~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~--g~--~~~~---~~----~~~~~~~v~q~ 781 (1065)
+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++ |. ++.. .. .++.+||++|+
T Consensus 21 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 98 (224)
T TIGR02324 21 LPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAWVDLAQASPREVLEVRRKTIGYVSQF 98 (224)
T ss_pred eEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCccchhhcCHHHHHHHHhcceEEEecc
Confidence 579999999999999999999999999999999999876 468999998 42 3221 11 23568999999
Q ss_pred CCCCCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCcc-ccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCc
Q 001507 782 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSI 860 (1065)
Q Consensus 782 ~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~-~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~i 860 (1065)
+.+++.+||+|++.+..... ........+.+.++++.+++.+. .+.. +..||||||||++|||||+.+|++
T Consensus 99 ~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~laral~~~p~l 170 (224)
T TIGR02324 99 LRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP-----PATFSGGEQQRVNIARGFIADYPI 170 (224)
T ss_pred cccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999998764322 12223334567888999998653 3332 357999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEecCCcHHHHHhcCeEEEEe
Q 001507 861 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 914 (1065)
Q Consensus 861 l~lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 914 (1065)
|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+...+|+++.+.
T Consensus 171 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 171 LLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 9999999999999999999999999777999999999965 4556899998763
No 497
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-35 Score=300.82 Aligned_cols=190 Identities=25% Similarity=0.408 Sum_probs=167.6
Q ss_pred eeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCc-------ccccceEEEEcCCCCCCCCCCH
Q 001507 718 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 790 (1065)
Q Consensus 718 ~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~~v~q~~~~~~~ltv 790 (1065)
+++|..+.-.++||-|+||||||||+|+|+|+.. +.+|.|.+||.-..+ ...+|++|||+||..+||++||
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~r--PdeG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tV 93 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTR--PDEGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTV 93 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCC--ccccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEE
Confidence 5677777657999999999999999999999987 579999999975321 2357889999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCCC
Q 001507 791 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 870 (1065)
Q Consensus 791 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsgL 870 (1065)
+-||.|+...- .....+++.+.||+.++.++.. ..|||||||||+|+|||++.|++|+||||.++|
T Consensus 94 rgNL~YG~~~~---------~~~~fd~iv~lLGI~hLL~R~P-----~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSL 159 (352)
T COG4148 94 RGNLRYGMWKS---------MRAQFDQLVALLGIEHLLDRYP-----GTLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred ecchhhhhccc---------chHhHHHHHHHhCcHHHHhhCC-----CccCcchhhHHHHHHHHhcCCCeeeecCchhhc
Confidence 99999975321 2334688999999999998865 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 871 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 871 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
|...+.+++-.|++++++ ...|+.+||.+. |+.+++|++++|. +|++...|+.
T Consensus 160 D~~RK~EilpylERL~~e~~IPIlYVSHS~~-Ev~RLAd~vV~le-~GkV~A~g~~ 213 (352)
T COG4148 160 DLPRKREILPYLERLRDEINIPILYVSHSLD-EVLRLADRVVVLE-NGKVKASGPL 213 (352)
T ss_pred ccchhhHHHHHHHHHHHhcCCCEEEEecCHH-HHHhhhheEEEec-CCeEEecCcH
Confidence 999999999999999876 889999999986 8999999999998 5899999986
No 498
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=318.58 Aligned_cols=220 Identities=21% Similarity=0.286 Sum_probs=169.7
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcC--CCCceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~--~~~~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++ +..+|+|+||++++||+++|+|+||||||||+++|+|.+. +..+.+|+|.++|.++... ..+
T Consensus 25 ~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 101 (268)
T PRK14248 25 KDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLR 101 (268)
T ss_pred EEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHh
Confidence 44555443 2469999999999999999999999999999999999764 2113599999999887432 124
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++. ||+||+.++...... ... ...+..+++.++.
T Consensus 102 ~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~-------------------------------~~~~~~~~~~l~~ 147 (268)
T PRK14248 102 REIGMVFQKPNPFPK-SIYNNITHALKYAGE--RRK-------------------------------SVLDEIVEESLTK 147 (268)
T ss_pred ccEEEEecCCccCcc-cHHHHHHHHHHhcCC--CcH-------------------------------HHHHHHHHHHHHH
Confidence 579999999988875 999999875432110 000 0001225666777
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+++.+...... ++.+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++|++++|+.
T Consensus 148 ~~l~~~~~~~~-~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~ 223 (268)
T PRK14248 148 AALWDEVKDRL-HSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE---EYSIIIVTHNM 223 (268)
T ss_pred cCCCcchHHHH-hcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc---CCEEEEEEeCH
Confidence 77742110111 233457999999999999999999999999999999999999999999999853 35777799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchHH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSVL 267 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~~ 267 (1065)
+++.++||++++|++|++++.|+.+++.
T Consensus 224 ~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 224 QQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999887663
No 499
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=317.16 Aligned_cols=219 Identities=19% Similarity=0.272 Sum_probs=168.5
Q ss_pred HHhhhhcCCccceecccCceEEEeCceEEEEecCCCCChHHHHHHHhcCcC--CCCceeEEEEECCccCCCC-----CCC
Q 001507 7 RQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPP 79 (1065)
Q Consensus 7 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~l~G~~GsGKSTLl~~l~G~~~--~~~~~~G~i~~~g~~~~~~-----~~~ 79 (1065)
+++++.++. +.+|+|+||++++||+++|+|+||||||||+++|+|... |..+.+|+|.++|.++... ..+
T Consensus 9 ~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 85 (252)
T PRK14255 9 SDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLR 85 (252)
T ss_pred EeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhc
Confidence 455555532 469999999999999999999999999999999999864 3212489999999876421 224
Q ss_pred ceEEEEccccccCCCCCHHHHHHHHhhccCCCCcchhhHHHHHHHHhhCCCCCchhHHHHhhhhccCCcchhHHHHHHHH
Q 001507 80 RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKI 159 (1065)
Q Consensus 80 ~~~~yv~Q~~~~~~~lTv~e~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 159 (1065)
+.++|++|++.+++ .||+||+.+.....+... .+ ..+..+.+.++.
T Consensus 86 ~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~ 131 (252)
T PRK14255 86 KQVGMVFQQPNPFP-FSIYENVIYGLRLAGVKD-KA--------------------------------VLDEAVETSLKQ 131 (252)
T ss_pred CeEEEEECCCccCC-CcHHHHHHHHHHHcCCCC-HH--------------------------------HHHHHHHHHHHH
Confidence 57999999998887 699999988643221100 00 001124455666
Q ss_pred hCCcccccccccCcccccCchhhhhhHHHHHHHhcCCeEEEEeCCCCCCChHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Q 001507 160 LGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA 239 (1065)
Q Consensus 160 lgL~~~~~t~vg~~~~~~LSGGqkqRv~ia~al~~~p~vllLDEPtsgLD~~~~~~i~~~l~~~~~~~~~~~ii~~~~~~ 239 (1065)
+++........ +..+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.
T Consensus 132 ~~l~~~i~~~~-~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~ 207 (252)
T PRK14255 132 AAIWDEVKDHL-HESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSM 207 (252)
T ss_pred cCCccchhhHH-hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCH
Confidence 66532111111 233457999999999999999999999999999999999999999999999854 3 5777799999
Q ss_pred hHHHhhcccEEEecCCcEEEEcCcchH
Q 001507 240 PEAYELFDDVILLSEGQIVYQGPRVSV 266 (1065)
Q Consensus 240 ~~~~~~~D~v~~l~~G~i~~~G~~~~~ 266 (1065)
+++.+.+|+|++|++|+++..|++.++
T Consensus 208 ~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 208 HQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999988765
No 500
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=1.3e-34 Score=312.92 Aligned_cols=186 Identities=25% Similarity=0.370 Sum_probs=157.7
Q ss_pred ceeEeeeeeeEEeCCeEEEEEcCCCCcHHHHHHHHHCCCCCCeeEEEEEECCccCCcccccceEEEEcCCCCCCCC--CC
Q 001507 712 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPG--LT 789 (1065)
Q Consensus 712 ~~~il~~vs~~i~~g~~~~i~G~nGaGKsTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~~v~q~~~~~~~--lt 789 (1065)
++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|. ..++|++|++.+++. .|
T Consensus 16 ~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~l~~~ 85 (251)
T PRK09544 16 QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK--------LRIGYVPQKLYLDTTLPLT 85 (251)
T ss_pred CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc--------cCEEEeccccccccccChh
Confidence 4579999999999999999999999999999999999876 56899999872 358999999877665 47
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHcCCCccccCcccCCCCCCCCHHHHHHHHHHHHHHhCCCceeecCCCCC
Q 001507 790 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 869 (1065)
Q Consensus 790 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~lSgGqrqr~~ia~~l~~~p~il~lDEPtsg 869 (1065)
+.+++.+. + ... .+.+.++++.+++.+..+... ..||||||||++|||+|+.+|++|+|||||+|
T Consensus 86 ~~~~~~~~-----~-~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDEPt~~ 150 (251)
T PRK09544 86 VNRFLRLR-----P-GTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGETQRVLLARALLNRPQLLVLDEPTQG 150 (251)
T ss_pred HHHHHhcc-----c-ccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 78876532 1 111 234678899999987766543 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CcEEEEEecCCcHHHHHhcCeEEEEecCcEEEEeCCC
Q 001507 870 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 925 (1065)
Q Consensus 870 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gg~~~~~g~~ 925 (1065)
||+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|. + +++..|+.
T Consensus 151 LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g~~ 204 (251)
T PRK09544 151 VDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSGTP 204 (251)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeCCH
Confidence 9999999999999998765 899999999986 5778899999995 4 68888875
Done!