Your job contains 1 sequence.
>001510
MGRRKQSRPHRSGGVTLENNNTTESESNKQKPHGSEQPEKEELADVDHPFFVEVNRTCWL
LDEHLDISEIVLTDLKLREEFSGFIISEDFYQVSRYTLRLHVCHVNEFIGRIKLGHWPLL
SSNDVTLEFVEKCMEEEMETCKIMLSGSFDAPDEGITGLVHLASMEFLTLRPTLGITFSE
DMSSLRVRVEILKSAFDACESLLENSRKTWKKSMINVMSWLRPEVLTSEARYGVSKSMEM
DVELMTRTKNDVSASQKHASFDVARFYEAIKRSKAEPMLEEDLPDLLPLLRPYQRRAAYW
MVQREKGDSASSSERERSQFFSPLCMPMDFLDTYSTLFYNPFSGSLSLSPDYTSSYVFGG
ILADEMGLGKTVELLACIFAHRKPASDDSIFIDTAVQVTDDQKVNLRRLKRERVECICGA
VSESRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMTNIVVRDGEH
ICQWCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLS
DTSIMDISELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWW
RICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISR
WWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEE
HFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLR
QACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEK
NLSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTEILPMVANCATELSQNEQHFPG
CSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDRKSDCCV
SSSSFDDASLITVCENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLE
ALHHAEGNKDFSAELIRKIEEAISGSLNKSRALRTASRTSLSQG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001510
(1064 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2064786 - symbol:AT2G40770 species:3702 "Arabi... 2843 4.0e-296 1
UNIPROTKB|E1C615 - symbol:SHPRH "Uncharacterized protein"... 779 2.3e-100 4
UNIPROTKB|E1C5L6 - symbol:SHPRH "Uncharacterized protein"... 779 2.3e-100 4
MGI|MGI:1917581 - symbol:Shprh "SNF2 histone linker PHD R... 753 1.2e-99 4
UNIPROTKB|E2R8G0 - symbol:SHPRH "Uncharacterized protein"... 753 3.3e-99 4
UNIPROTKB|Q149N8 - symbol:SHPRH "E3 ubiquitin-protein lig... 749 6.0e-98 4
UNIPROTKB|E1BLB1 - symbol:SHPRH "Uncharacterized protein"... 764 1.6e-96 4
UNIPROTKB|F1S736 - symbol:SHPRH "Uncharacterized protein"... 769 8.1e-94 4
UNIPROTKB|K4DI94 - symbol:SHPRH "SNF2 histone linker PHD ... 726 6.7e-91 4
RGD|1310342 - symbol:Shprh "SNF2 histone linker PHD RING ... 711 1.1e-88 5
DICTYBASE|DDB_G0287171 - symbol:DDB_G0287171 "CHR group p... 623 1.1e-68 4
POMBASE|SPAC144.05 - symbol:SPAC144.05 "ATP-dependent DNA... 326 1.7e-35 4
ASPGD|ASPL0000031617 - symbol:AN10707 species:162425 "Eme... 346 6.0e-33 2
TAIR|locus:2158357 - symbol:AT5G43530 species:3702 "Arabi... 239 1.5e-32 4
UNIPROTKB|G4N1L6 - symbol:MGG_07487 "ATP-dependent DNA he... 338 1.5e-32 3
FB|FBgn0035689 - symbol:CG7376 species:7227 "Drosophila m... 366 1.4e-29 1
MGI|MGI:1196437 - symbol:Hltf "helicase-like transcriptio... 234 1.3e-28 5
TAIR|locus:2162504 - symbol:RAD5 species:3702 "Arabidopsi... 260 1.3e-27 3
RGD|1309031 - symbol:Hltf "helicase-like transcription fa... 234 1.3e-27 5
UNIPROTKB|E2R9I5 - symbol:HLTF "Uncharacterized protein" ... 225 2.6e-27 5
UNIPROTKB|I3LM88 - symbol:HLTF "Uncharacterized protein" ... 225 4.3e-27 5
UNIPROTKB|F1MLM2 - symbol:HLTF "Uncharacterized protein" ... 219 4.8e-26 5
POMBASE|SPAC13G6.01c - symbol:rad8 "ubiquitin-protein lig... 188 5.7e-26 4
WB|WBGene00010061 - symbol:F54E12.2 species:6239 "Caenorh... 297 1.3e-25 3
ASPGD|ASPL0000056426 - symbol:AN0044 species:162425 "Emer... 226 2.4e-25 4
ZFIN|ZDB-GENE-030131-3306 - symbol:hltf "helicase-like tr... 213 3.2e-25 4
UNIPROTKB|Q14527 - symbol:HLTF "Helicase-like transcripti... 222 9.3e-25 5
DICTYBASE|DDB_G0272082 - symbol:DDB_G0272082 "CHR group p... 206 1.1e-23 5
UNIPROTKB|F1N2E8 - symbol:TTF2 "Uncharacterized protein" ... 283 2.5e-23 4
WB|WBGene00020235 - symbol:T05A12.4 species:6239 "Caenorh... 306 5.9e-23 1
ZFIN|ZDB-GENE-110411-73 - symbol:si:ch1073-303l5.1 "si:ch... 271 5.6e-22 3
TAIR|locus:2008096 - symbol:AT1G50410 species:3702 "Arabi... 211 5.9e-22 4
TAIR|locus:2089318 - symbol:AT3G16600 species:3702 "Arabi... 244 6.7e-22 4
UNIPROTKB|I3L7V5 - symbol:TTF2 "Uncharacterized protein" ... 287 7.4e-22 3
UNIPROTKB|F1SAY2 - symbol:TTF2 "Uncharacterized protein" ... 287 8.0e-22 3
SGD|S000004022 - symbol:RAD5 "DNA helicase" species:4932 ... 235 8.0e-22 5
POMBASE|SPBC582.10c - symbol:SPBC582.10c "ATP-dependent D... 245 1.4e-21 2
UNIPROTKB|E2RGF7 - symbol:TTF2 "Uncharacterized protein" ... 277 2.2e-21 3
ASPGD|ASPL0000065871 - symbol:AN7538 species:162425 "Emer... 216 3.0e-21 4
TAIR|locus:2095360 - symbol:AT3G20010 species:3702 "Arabi... 205 3.7e-21 4
UNIPROTKB|E1C366 - symbol:TTF2 "Uncharacterized protein" ... 264 4.1e-21 2
UNIPROTKB|Q9UNY4 - symbol:TTF2 "Transcription termination... 265 4.2e-21 2
UNIPROTKB|E1C1L9 - symbol:TTF2 "Uncharacterized protein" ... 264 4.3e-21 2
UNIPROTKB|D4A1K7 - symbol:Ttf2 "Protein Ttf2" species:101... 261 7.8e-21 2
MGI|MGI:1921294 - symbol:Ttf2 "transcription termination ... 261 1.3e-20 2
CGD|CAL0000717 - symbol:orf19.5675 species:5476 "Candida ... 266 1.7e-20 3
TAIR|locus:2008470 - symbol:EDA16 "embryo sac development... 205 5.8e-20 5
TAIR|locus:2207175 - symbol:AT1G05120 species:3702 "Arabi... 138 1.0e-19 5
SGD|S000000318 - symbol:RAD16 "Protein that binds damaged... 236 1.9e-19 4
GENEDB_PFALCIPARUM|MAL13P1.216 - symbol:MAL13P1.216 "DNA ... 179 2.7e-19 5
CGD|CAL0006085 - symbol:RAD16 species:5476 "Candida albic... 236 3.9e-19 4
POMBASE|SPAC17A2.12 - symbol:rrp1 "ATP-dependent DNA heli... 243 9.3e-19 2
FB|FBgn0002542 - symbol:lds "lodestar" species:7227 "Dros... 179 9.5e-19 4
POMBASE|SPBC23E6.02 - symbol:rrp2 "ATP-dependent DNA heli... 214 2.7e-18 3
UNIPROTKB|H7C5K0 - symbol:HLTF "Helicase-like transcripti... 222 3.0e-18 2
CGD|CAL0004569 - symbol:orf19.2097 species:5476 "Candida ... 205 3.5e-18 3
WB|WBGene00020742 - symbol:T23H2.3 species:6239 "Caenorha... 240 1.5e-17 4
SGD|S000004237 - symbol:IRC20 "Putative helicase" species... 213 2.1e-17 2
POMBASE|SPCC330.01c - symbol:rhp16 "Rad16 homolog Rhp16" ... 186 1.2e-16 4
DICTYBASE|DDB_G0282115 - symbol:DDB_G0282115 "CHR group p... 260 1.2e-16 2
ASPGD|ASPL0000030172 - symbol:AN5483 species:162425 "Emer... 218 2.6e-15 4
UNIPROTKB|G4MPA7 - symbol:MGG_07014 "DNA repair protein R... 217 8.1e-15 4
GENEDB_PFALCIPARUM|PFL2440w - symbol:PFL2440w "DNA repair... 150 1.5e-13 6
UNIPROTKB|Q8I4S6 - symbol:PFL2440w "DNA repair protein rh... 150 1.5e-13 6
SGD|S000005717 - symbol:ULS1 "Protein involved in proteol... 198 1.6e-13 3
ASPGD|ASPL0000008250 - symbol:AN10794 species:162425 "Eme... 197 4.3e-13 2
DICTYBASE|DDB_G0281949 - symbol:helE "CHR group protein" ... 183 1.9e-12 2
UNIPROTKB|G4NIT2 - symbol:MGG_12155 "Uncharacterized prot... 165 4.5e-12 2
FB|FBgn0037531 - symbol:CG10445 species:7227 "Drosophila ... 122 9.4e-12 4
ASPGD|ASPL0000049992 - symbol:AN2256 species:162425 "Emer... 115 4.5e-10 4
CGD|CAL0000073 - symbol:orf19.1667 species:5476 "Candida ... 182 8.7e-10 1
UNIPROTKB|Q5AJC4 - symbol:CaO19.1667 "Putative uncharacte... 182 8.7e-10 1
UNIPROTKB|Q8EGF3 - symbol:SO_1651 "Helicase/SNF2 family d... 124 1.4e-09 3
TIGR_CMR|SO_1651 - symbol:SO_1651 "Snf2 family protein" s... 124 1.4e-09 3
UNIPROTKB|G4NCV5 - symbol:MGG_01012 "ISWI chromatin-remod... 129 2.9e-09 4
UNIPROTKB|Q47YP1 - symbol:CPS_3404 "Snf2 family protein" ... 151 7.8e-09 3
TIGR_CMR|CPS_3404 - symbol:CPS_3404 "Snf2 family protein"... 151 7.8e-09 3
TAIR|locus:504955712 - symbol:AT3G54460 species:3702 "Ara... 121 9.2e-09 4
TAIR|locus:2182978 - symbol:CHR17 "chromatin remodeling f... 157 1.3e-08 4
DICTYBASE|DDB_G0292948 - symbol:isw "CHR group protein" s... 139 1.4e-08 4
TIGR_CMR|BA_5487 - symbol:BA_5487 "helicase, putative" sp... 121 1.9e-08 4
GENEDB_PFALCIPARUM|PF11_0053 - symbol:PF11_0053 "PfSNF2L"... 124 4.0e-08 4
UNIPROTKB|Q8IIW0 - symbol:PF11_0053 "PfSNF2L" species:363... 124 4.0e-08 4
RGD|1311935 - symbol:Chd1l "chromodomain helicase DNA bin... 113 4.8e-08 4
ASPGD|ASPL0000061821 - symbol:AN10043 species:162425 "Eme... 132 5.7e-08 2
UNIPROTKB|I3LTT5 - symbol:SMARCA1 "Uncharacterized protei... 135 6.0e-08 3
WB|WBGene00002169 - symbol:isw-1 species:6239 "Caenorhabd... 140 7.2e-08 3
UNIPROTKB|O53499 - symbol:helZ "PROBABLE HELICASE HELZ" s... 117 7.8e-08 5
SGD|S000005831 - symbol:ISW2 "ATP-dependent DNA transloca... 134 8.4e-08 5
TAIR|locus:2040184 - symbol:PKL "PICKLE" species:3702 "Ar... 125 9.5e-08 5
UNIPROTKB|F1P0A4 - symbol:SMARCA5 "Uncharacterized protei... 130 1.0e-07 3
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica... 117 1.0e-07 5
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"... 117 1.3e-07 5
MGI|MGI:1915308 - symbol:Chd1l "chromodomain helicase DNA... 111 1.5e-07 4
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc... 135 1.5e-07 3
ZFIN|ZDB-GENE-070705-296 - symbol:si:dkey-148b12.1 "si:dk... 136 1.6e-07 3
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc... 135 1.8e-07 3
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei... 135 1.8e-07 3
UNIPROTKB|K7GNV1 - symbol:SMARCA1 "Uncharacterized protei... 135 1.8e-07 3
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei... 135 1.9e-07 3
WARNING: Descriptions of 189 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2064786 [details] [associations]
symbol:AT2G40770 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR013026
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS50293
PROSITE:PS51194 SMART:SM00184 SMART:SM00249 SMART:SM00490
GO:GO:0005524 EMBL:CP002685 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR014001 SMART:SM00487 KO:K15710
OMA:NVESLYY IPI:IPI00517573 RefSeq:NP_181609.4 UniGene:At.25019
UniGene:At.27873 ProteinModelPortal:F4II36 PRIDE:F4II36
EnsemblPlants:AT2G40770.1 GeneID:818674 KEGG:ath:AT2G40770
Uniprot:F4II36
Length = 1664
Score = 2843 (1005.8 bits), Expect = 4.0e-296, P = 4.0e-296
Identities = 571/963 (59%), Positives = 701/963 (72%)
Query: 1 MGRRKQSRPHRSGG-VTLXXXXXXXXXXXKQKPHGSEQPEKEELADVDHPFFVEVNRTCW 59
MGRRKQS+P R+ G +T + GS E D+D P++V + +
Sbjct: 1 MGRRKQSKPQRAVGLITPTGSESDRNQLPGDEAEGSGDKNVE---DIDKPYYVNICLSSR 57
Query: 60 LLDE--HLDISEIVLTDLKLREEFSGFIISEDFYQVSR---YTLRLHVCHVNEFIGRIKL 114
+ ++ + D++E+VLT+ +RE +V +LR +C+V F+ RIKL
Sbjct: 58 VSEQQQNFDLAEVVLTNFSVRERVGSSSTFTKPIEVDHDLDCSLRFRLCNVTNFVDRIKL 117
Query: 115 GHWPLLSSNDVTLEFVXXXXXXXXXXXXIMLSGSFDAPDEGITGLVHLASMEFLTLRPTL 174
GHWP+LSS+D+TLE V I S SFD P EG++GL HLAS++FLTLR
Sbjct: 118 GHWPVLSSSDITLELVDNKVSDDEVGSVIW-SASFDGPGEGVSGLAHLASIKFLTLRLMP 176
Query: 175 GITFSEDMSSLRVRVEILKSAFDACESLLENSRKTWKKSMINVMSWLRPEVLTSEARYGV 234
G +E + S RVRVE+L+ AFDAC+SLLEN+R+ WKKSMI+VMSWLRPEV+TSEARYG
Sbjct: 177 G---NEGLLSPRVRVEMLQQAFDACDSLLENTRQIWKKSMIHVMSWLRPEVMTSEARYGT 233
Query: 235 SKSMEMDVELMTRTKNDVSASQKHASFDVARFYEAIKRSKAEPMXXXXXXXXXXXXRPYQ 294
+++ D+E T+++ S K +SFD A FYEAIK SK + M RPYQ
Sbjct: 234 RFNVK-DIESSVVTEDETLDSSKQSSFDAAAFYEAIKPSKTDAMLGDDIADLLPELRPYQ 292
Query: 295 RRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSPDYTS 354
RRAAYWMVQRE+GD PL + + FLD+ + +F NPFSG++SL+P+Y S
Sbjct: 293 RRAAYWMVQRERGDPITLGDKEDNQFISPLSISVGFLDSATKMFLNPFSGNISLTPEYFS 352
Query: 355 SYVFGGILADEMGLGKTVELLACIFAHRKPASDDSIFIDTAVQVTDDQKVNLRRLKRERV 414
+ GGILADEMGLGKTVELLACIF+HRKPA D+ I + VTD LRRLKRERV
Sbjct: 353 PRIQGGILADEMGLGKTVELLACIFSHRKPAEDE-ISVSNGSSVTDVLNAGLRRLKRERV 411
Query: 415 ECICGAVSESRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFEL-KKHTRKK---DM 470
ECICGAVSES KYKG+WVQCD+CDAWQHADCVGYSP+GK ++ + + +K ++KK D
Sbjct: 412 ECICGAVSESHKYKGVWVQCDLCDAWQHADCVGYSPKGKGKKDSQHIDEKASQKKSKKDA 471
Query: 471 TNIVVRDGEHICQWCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCI 530
T I+VR+GE+ICQ C EL++ T SP++TGATLIVCPAPIL QW +EITRHTR GSL TCI
Sbjct: 472 TEIIVREGEYICQMCSELLQVTASPISTGATLIVCPAPILPQWHSEITRHTRLGSLITCI 531
Query: 531 YEGARNSSLSDTSIMDISELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVI 590
YEG RN+SLS+ ++DI+EL+ ADIVLTTYDVLKEDL+HD DRH+GDR +RFQKRYPVI
Sbjct: 532 YEGVRNASLSEEPMIDITELLNADIVLTTYDVLKEDLTHDFDRHDGDRHCLRFQKRYPVI 591
Query: 591 PTLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRF 650
PT LTRIFWWRICLDEAQMVESNAAAATEMALRLY KHRWCITGTPIQRKLDDL+GLL+F
Sbjct: 592 PTPLTRIFWWRICLDEAQMVESNAAAATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKF 651
Query: 651 LKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECV 710
LK++PF +SRWWIEVIRDPYE D AMEFTHKFFK++M RSSKVHV+DELQLPPQEECV
Sbjct: 652 LKANPFDVSRWWIEVIRDPYERRDTKAMEFTHKFFKQVMWRSSKVHVADELQLPPQEECV 711
Query: 711 SWLTFSPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAA 770
SWL FS IEEHFY QH+TCV YAREVI+ LK +ILKR GH SSD NP++THAEAA
Sbjct: 712 SWLKFSAIEEHFYSRQHDTCVSYAREVIETLKRDILKR---GHTSSD---NPLVTHAEAA 765
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
KLLNSLLKLRQACCHPQVGSSGLRSLQQSP++M+EILMVL+ KT+ EGEEALR L++ALN
Sbjct: 766 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPMTMEEILMVLVKKTQSEGEEALRVLIVALN 825
Query: 831 GLAGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTEILPMVANCATE 890
G+A IA++++ S+AVSLYKEA+++ EEH+EDFRLDPLLNIH+ HNL EILPM + +
Sbjct: 826 GIAAIAMLKQEFSEAVSLYKEALSITEEHAEDFRLDPLLNIHILHNLAEILPMAKSYGGK 885
Query: 891 LSQNEQHFPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGF 950
LS + G E KI + A K QR++ E+ +E + +NG
Sbjct: 886 LSAS-----GRPET--KIDVKDDDHHRASKRQRINELESLTHDSSETVHQREAIAPDNGL 938
Query: 951 NGD 953
D
Sbjct: 939 KKD 941
Score = 739 (265.2 bits), Expect = 7.2e-72, P = 7.2e-72
Identities = 164/313 (52%), Positives = 210/313 (67%)
Query: 746 LKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDE 805
LKR++ + + NP++THAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSP++M+E
Sbjct: 742 LKRDILKRGHTSS-DNPLVTHAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPMTMEE 800
Query: 806 ILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRL 865
ILMVL+ KT+ EGEEALR L++ALNG+A IA++++ S+AVSLYKEA+++ EEH+EDFRL
Sbjct: 801 ILMVLVKKTQSEGEEALRVLIVALNGIAAIAMLKQEFSEAVSLYKEALSITEEHAEDFRL 860
Query: 866 DPLLNIHLHHNLTEILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQRVS 925
DPLLNIH+ HNL EILPM + +LS + G E KI + A K QR++
Sbjct: 861 DPLLNIHILHNLAEILPMAKSYGGKLSAS-----GRPET--KIDVKDDDHHRASKRQRIN 913
Query: 926 REENSDFTDAEDPSGHLSDLSENGFNGDRKXXXXXXXXXXXXXXLITVCENLKQKYLSGF 985
E+ +E + +NG D + L VC+ LK KYLS F
Sbjct: 914 ELESLTHDSSETVHQREAIAPDNGLKKDGECHEECKT-------LDIVCDTLKVKYLSAF 966
Query: 986 SVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAELIRKIEEAISG 1045
+ KLS AQ EF+KSY QV +L + KQ S WWL+AL E NKDFS+EL RKIEEA+ G
Sbjct: 967 NSKLSAAQHEFKKSYNQVSESLSNMGKQRSVWWLDALQLTEQNKDFSSELTRKIEEALHG 1026
Query: 1046 SLNKSRALRTASR 1058
+LN S + R +SR
Sbjct: 1027 NLNNSSSSRESSR 1039
>UNIPROTKB|E1C615 [details] [associations]
symbol:SHPRH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00538 Pfam:PF00628 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184
SMART:SM00249 SMART:SM00490 SMART:SM00526 Prosite:PS00518
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00700000104571 EMBL:AADN02025316
IPI:IPI00821492 Ensembl:ENSGALT00000037603 Uniprot:E1C615
Length = 1682
Score = 779 (279.3 bits), Expect = 2.3e-100, Sum P(4) = 2.3e-100
Identities = 181/454 (39%), Positives = 255/454 (56%)
Query: 484 WCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTS 543
+C + A PV+TGATLI+ P+ I QW EI RH R SL+ +Y+G +
Sbjct: 702 YCPHCLVAM-KPVSTGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPH 760
Query: 544 IMDISELVGADIVLTTYDVLKEDLSHDSDRH---EGDRRFMRFQKRYPVIPTLLTRIFWW 600
+ L D+V+TTYDVL+ +L++ H E RRF R QKRY IP+ L + WW
Sbjct: 761 M-----LAEQDVVITTYDVLRTELNYVDIPHSNSEDGRRF-RNQKRYMAIPSPLVAVEWW 814
Query: 601 RICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISR 660
RICLDEAQMVE A A EMALRL +RWC++GTP+QR L+DLYGL+ FL P+ +
Sbjct: 815 RICLDEAQMVECTTAKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGIDPYWVKH 874
Query: 661 WWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEE 720
WW +++ PY + + + +IM RS+K V D++Q+PPQ E + WL FSP+E
Sbjct: 875 WWDQLLYRPYCRKNSQPL---YSLIAKIMWRSAKKDVIDQIQIPPQTENIHWLHFSPVER 931
Query: 721 HFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLR 780
HFY QHE C A ++++ D LK + +L +T +L LL+LR
Sbjct: 932 HFYHRQHEVCCQDALAKLRKISDWTLKLS--------SLDRRTVT-----SILYPLLRLR 978
Query: 781 QACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEK 840
QACCHPQ LQ+S ++M+E+L L K + E EEA R+LV ALNGLAGI +I+
Sbjct: 979 QACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCRTECEEAHRQLVCALNGLAGIHIIKG 1038
Query: 841 NLSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTEIL-------PMV--ANCATEL 891
+ A LY+E + EEH E + D L +H HNL E+L P + + + E
Sbjct: 1039 EYALAAELYREVLRSSEEHKEKLKTDSLQRLHSTHNLMELLAKHTGIPPTLRDSQLSAEA 1098
Query: 892 SQNEQHFPGCSE-KAFKIH-SIETCDENARKCQR 923
Q QH+ S + + H +++ + R+ QR
Sbjct: 1099 EQLRQHYMSKSNAEVAEAHQALQPVLQTIRELQR 1132
Score = 139 (54.0 bits), Expect = 2.3e-100, Sum P(4) = 2.3e-100
Identities = 38/101 (37%), Positives = 48/101 (47%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
RPYQ A WM+ RE L + LD ++YNPF+G +
Sbjct: 303 RPYQSEAVNWMLHRENFTNTPGGENALHF----LWREVITLDGVK-IYYNPFTGCVIREY 357
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAH-RKPASDDSI 390
+ GGILADEMGLGKTVE+LA I H R+ D +
Sbjct: 358 PFAGPQWPGGILADEMGLGKTVEVLALILTHTREDIKQDDL 398
Score = 100 (40.3 bits), Expect = 2.3e-100, Sum P(4) = 2.3e-100
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 413 RVECICGAVSESRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMTN 472
R ECICG + YK VQC C WQHA+CV Y K + + K ++
Sbjct: 658 RFECICGELGLV-DYKAR-VQCLKCHLWQHAECVNYKEENLKIKPFYCPHCLVAMKPVST 715
Query: 473 --IVVRDGEHIC-QWCDEL 488
++ IC QW DE+
Sbjct: 716 GATLIISPSSICHQWVDEI 734
Score = 69 (29.3 bits), Expect = 2.3e-100, Sum P(4) = 2.3e-100
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 975 ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAE 1034
E L+Q Y+S + +++ A Q + +Q L + S WWL+ + A E
Sbjct: 1099 EQLRQHYMSKSNAEVAEAHQALQP-VLQTIRELQRKIHSSSPWWLDVIQTAI-QYAIDEE 1156
Query: 1035 LIRKIEEAIS 1044
L+++++ I+
Sbjct: 1157 LVQRVQNEIT 1166
Score = 46 (21.3 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 648 LRFLKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMC----RSSKVHVSDELQ 702
+R L+ S S WW++VI+ + + E + EI C +++K+ ++D+ +
Sbjct: 1127 IRELQRKIHSSSPWWLDVIQTAIQYA-IDE-ELVQRVQNEITCNYKQQTNKLSMADKFR 1183
Score = 44 (20.5 bits), Expect = 2.1e-90, Sum P(4) = 2.1e-90
Identities = 22/87 (25%), Positives = 39/87 (44%)
Query: 179 SEDMSSLRVRVEILKSAFDACESLLENSRKTWKKSMINVMSWLRPEVLTSEARYGVSKSM 238
S D+ + +R I D C ++ +N RK+ + N M E +A VSKS
Sbjct: 553 STDVLKIPLRTSIATEEHDYCATI-KNDRKS-ETDNENSME----ENNIQKA--AVSKSP 604
Query: 239 EMDVELMTRTKNDVSASQKHASFDVAR 265
++ ++ + + DVS S ++ R
Sbjct: 605 DLHGDISSHSDFDVSKSTTDVQQEMPR 631
Score = 41 (19.5 bits), Expect = 3.5e-94, Sum P(4) = 3.5e-94
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 382 RKPASDDSIF-IDTAVQVTDDQKVNLRRLKRERVECICGAVSESRKYKGL 430
+K AS +IF +AV D Q+ N R LKR + I V E K GL
Sbjct: 453 KKGASIFAIFKYISAVYRYDIQR-NRRLLKRTLEKLIAEQVVEQVKGHGL 501
Score = 37 (18.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 988 KLSVAQQEFRKSYMQVCNA-LDDREKQY--SAWWLEALHHAEGNKDFSAELIRKIEEAIS 1044
K ++ +E S + C ++ +Q + L +H +G +AEL R E +
Sbjct: 996 KSTMTMEELLTSLQKKCRTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYR---EVLR 1052
Query: 1045 GSLNKSRALRTAS 1057
S L+T S
Sbjct: 1053 SSEEHKEKLKTDS 1065
>UNIPROTKB|E1C5L6 [details] [associations]
symbol:SHPRH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00538 Pfam:PF00628 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184
SMART:SM00249 SMART:SM00490 SMART:SM00526 Prosite:PS00518
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00700000104571 OMA:FEGLVKQ
EMBL:AADN02025316 IPI:IPI00575038 Ensembl:ENSGALT00000020082
Uniprot:E1C5L6
Length = 1682
Score = 779 (279.3 bits), Expect = 2.3e-100, Sum P(4) = 2.3e-100
Identities = 181/454 (39%), Positives = 255/454 (56%)
Query: 484 WCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTS 543
+C + A PV+TGATLI+ P+ I QW EI RH R SL+ +Y+G +
Sbjct: 702 YCPHCLVAM-KPVSTGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPH 760
Query: 544 IMDISELVGADIVLTTYDVLKEDLSHDSDRH---EGDRRFMRFQKRYPVIPTLLTRIFWW 600
+ L D+V+TTYDVL+ +L++ H E RRF R QKRY IP+ L + WW
Sbjct: 761 M-----LAEQDVVITTYDVLRTELNYVDIPHSNSEDGRRF-RNQKRYMAIPSPLVAVEWW 814
Query: 601 RICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISR 660
RICLDEAQMVE A A EMALRL +RWC++GTP+QR L+DLYGL+ FL P+ +
Sbjct: 815 RICLDEAQMVECTTAKAAEMALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGIDPYWVKH 874
Query: 661 WWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEE 720
WW +++ PY + + + +IM RS+K V D++Q+PPQ E + WL FSP+E
Sbjct: 875 WWDQLLYRPYCRKNSQPL---YSLIAKIMWRSAKKDVIDQIQIPPQTENIHWLHFSPVER 931
Query: 721 HFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLR 780
HFY QHE C A ++++ D LK + +L +T +L LL+LR
Sbjct: 932 HFYHRQHEVCCQDALAKLRKISDWTLKLS--------SLDRRTVT-----SILYPLLRLR 978
Query: 781 QACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEK 840
QACCHPQ LQ+S ++M+E+L L K + E EEA R+LV ALNGLAGI +I+
Sbjct: 979 QACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCRTECEEAHRQLVCALNGLAGIHIIKG 1038
Query: 841 NLSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTEIL-------PMV--ANCATEL 891
+ A LY+E + EEH E + D L +H HNL E+L P + + + E
Sbjct: 1039 EYALAAELYREVLRSSEEHKEKLKTDSLQRLHSTHNLMELLAKHTGIPPTLRDSQLSAEA 1098
Query: 892 SQNEQHFPGCSE-KAFKIH-SIETCDENARKCQR 923
Q QH+ S + + H +++ + R+ QR
Sbjct: 1099 EQLRQHYMSKSNAEVAEAHQALQPVLQTIRELQR 1132
Score = 139 (54.0 bits), Expect = 2.3e-100, Sum P(4) = 2.3e-100
Identities = 38/101 (37%), Positives = 48/101 (47%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
RPYQ A WM+ RE L + LD ++YNPF+G +
Sbjct: 308 RPYQSEAVNWMLHRENFTNTPGGENALHF----LWREVITLDGVK-IYYNPFTGCVIREY 362
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAH-RKPASDDSI 390
+ GGILADEMGLGKTVE+LA I H R+ D +
Sbjct: 363 PFAGPQWPGGILADEMGLGKTVEVLALILTHTREDIKQDDL 403
Score = 100 (40.3 bits), Expect = 2.3e-100, Sum P(4) = 2.3e-100
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 413 RVECICGAVSESRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMTN 472
R ECICG + YK VQC C WQHA+CV Y K + + K ++
Sbjct: 658 RFECICGELGLV-DYKAR-VQCLKCHLWQHAECVNYKEENLKIKPFYCPHCLVAMKPVST 715
Query: 473 --IVVRDGEHIC-QWCDEL 488
++ IC QW DE+
Sbjct: 716 GATLIISPSSICHQWVDEI 734
Score = 69 (29.3 bits), Expect = 2.3e-100, Sum P(4) = 2.3e-100
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 975 ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAE 1034
E L+Q Y+S + +++ A Q + +Q L + S WWL+ + A E
Sbjct: 1099 EQLRQHYMSKSNAEVAEAHQALQP-VLQTIRELQRKIHSSSPWWLDVIQTAI-QYAIDEE 1156
Query: 1035 LIRKIEEAIS 1044
L+++++ I+
Sbjct: 1157 LVQRVQNEIT 1166
Score = 46 (21.3 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 648 LRFLKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMC----RSSKVHVSDELQ 702
+R L+ S S WW++VI+ + + E + EI C +++K+ ++D+ +
Sbjct: 1127 IRELQRKIHSSSPWWLDVIQTAIQYA-IDE-ELVQRVQNEITCNYKQQTNKLSMADKFR 1183
Score = 41 (19.5 bits), Expect = 3.5e-94, Sum P(4) = 3.5e-94
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 382 RKPASDDSIF-IDTAVQVTDDQKVNLRRLKRERVECICGAVSESRKYKGL 430
+K AS +IF +AV D Q+ N R LKR + I V E K GL
Sbjct: 458 KKGASIFAIFKYISAVYRYDIQR-NRRLLKRTLEKLIAEQVVEQVKGHGL 506
Score = 37 (18.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 988 KLSVAQQEFRKSYMQVCNA-LDDREKQY--SAWWLEALHHAEGNKDFSAELIRKIEEAIS 1044
K ++ +E S + C ++ +Q + L +H +G +AEL R E +
Sbjct: 996 KSTMTMEELLTSLQKKCRTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYR---EVLR 1052
Query: 1045 GSLNKSRALRTAS 1057
S L+T S
Sbjct: 1053 SSEEHKEKLKTDS 1065
>MGI|MGI:1917581 [details] [associations]
symbol:Shprh "SNF2 histone linker PHD RING helicase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000786 "nucleosome" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR005818
Pfam:PF00176 Pfam:PF00271 Pfam:PF00538 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184
SMART:SM00249 SMART:SM00526 UniPathway:UPA00143 MGI:MGI:1917581
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0016874 GO:GO:0008270 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 GO:GO:0000786
GeneTree:ENSGT00700000104571 KO:K15710 CTD:257218
HOVERGEN:HBG059171 OrthoDB:EOG4G4GPJ EMBL:AY162264 EMBL:AY162265
EMBL:AY162266 EMBL:AK053448 EMBL:AK082160 EMBL:BC006883
EMBL:BC055003 IPI:IPI00380430 IPI:IPI00469003 IPI:IPI00623316
IPI:IPI00845816 RefSeq:NP_001071175.1 RefSeq:NP_766525.3
UniGene:Mm.133101 ProteinModelPortal:Q7TPQ3 SMR:Q7TPQ3
STRING:Q7TPQ3 PhosphoSite:Q7TPQ3 PaxDb:Q7TPQ3 PRIDE:Q7TPQ3
Ensembl:ENSMUST00000044053 Ensembl:ENSMUST00000054814
Ensembl:ENSMUST00000159541 Ensembl:ENSMUST00000159810 GeneID:268281
KEGG:mmu:268281 UCSC:uc007ejp.1 UCSC:uc007ejq.1 InParanoid:Q7TPQ3
OMA:FEGLVKQ ChiTaRS:SHPRH NextBio:392208 Bgee:Q7TPQ3
CleanEx:MM_SHPRH Genevestigator:Q7TPQ3 Uniprot:Q7TPQ3
Length = 1674
Score = 753 (270.1 bits), Expect = 1.2e-99, Sum P(4) = 1.2e-99
Identities = 167/400 (41%), Positives = 228/400 (57%)
Query: 484 WCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTS 543
+C + A + PV+T ATLI+ P+ I QW EI RH R SL+ +Y+G +
Sbjct: 693 YCPHCLVAME-PVSTRATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPH 751
Query: 544 IMDISELVGADIVLTTYDVLKEDLSHDSDRHEG--DRRFMRFQKRYPVIPTLLTRIFWWR 601
L DIV+ TYDVL+ +L++ + H D R +R QKRY IP+ L + WWR
Sbjct: 752 F-----LAEQDIVIITYDVLRSELNYVNIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWR 806
Query: 602 ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRW 661
ICLDEAQMVE A EMA RL +RWCI+GTP+QR L+DL+GL+ FL P+ + W
Sbjct: 807 ICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHW 866
Query: 662 WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEH 721
WI ++ PY + + + F +IM RS+K V D++Q+PPQ E + WL FSP+E H
Sbjct: 867 WIRLLYHPYCKKNP---QHLYSFIAKIMWRSAKKDVIDQIQIPPQTEEMHWLHFSPVERH 923
Query: 722 FYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQ 781
FY QHE C A ++++ D LK SS + + +L LL+LRQ
Sbjct: 924 FYHRQHEVCCQDAIVKLRKISDWALK------LSS-------LDRRTVSSILYPLLRLRQ 970
Query: 782 ACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEKN 841
ACCHPQ LQ+S ++M+E+L L K E EEA R+LV ALNGLAGI +I+
Sbjct: 971 ACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGE 1030
Query: 842 LSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTEIL 881
+ A LY+E + EEH + D L +H HNL E+L
Sbjct: 1031 YALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELL 1070
Score = 160 (61.4 bits), Expect = 1.2e-99, Sum P(4) = 1.2e-99
Identities = 39/101 (38%), Positives = 53/101 (52%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
RPYQR A WM+Q+E+ + P D L L+YNP++G +
Sbjct: 300 RPYQREAVNWMLQQEQFRSAPPADNSLHFLWREIVTP-DGLK----LYYNPYTGCIIRDF 354
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAH-RKPASDDSI 390
+ + GGILADEMGLGKTVE+LA I H R+ D++
Sbjct: 355 PHAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDAL 395
Score = 91 (37.1 bits), Expect = 1.2e-99, Sum P(4) = 1.2e-99
Identities = 25/80 (31%), Positives = 36/80 (45%)
Query: 413 RVECICGAVSE-SRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMT 471
R ECICG + K + VQC C WQHA CV Y + K + + + ++
Sbjct: 649 RFECICGEFDQIGHKPR---VQCLKCHLWQHAKCVNYEEKNLKVKPFYCPHCLVAMEPVS 705
Query: 472 N--IVVRDGEHIC-QWCDEL 488
++ IC QW DE+
Sbjct: 706 TRATLIISPSSICHQWVDEI 725
Score = 77 (32.2 bits), Expect = 1.2e-99, Sum P(4) = 1.2e-99
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 975 ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSA- 1033
+ L++ Y+S + +++ AQQ + Q L + S WWL +H A +FS
Sbjct: 1091 KQLREHYMSKCNTEVAEAQQALQP-VQQSIRELQRKIHSNSPWWLNVIHRA---MEFSVD 1146
Query: 1034 -ELIRKIEEAISGS 1046
EL++++ IS +
Sbjct: 1147 EELVQRVRNEISSN 1160
Score = 46 (21.3 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 24/91 (26%), Positives = 41/91 (45%)
Query: 638 QRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHV 697
Q+ L + +R L+ S S WW+ VI E V E + EI S+
Sbjct: 1109 QQALQPVQQSIRELQRKIHSNSPWWLNVIHRAMEFS-VDE-ELVQRVRNEIS--SNYKQQ 1164
Query: 698 SDELQLPPQ-EEC--VSWLTFSPIEE-HFYQ 724
+D+L + + +C + +L + +EE H +Q
Sbjct: 1165 TDKLSMSEKFRDCRGLQFLLTTQMEELHKFQ 1195
Score = 43 (20.2 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 718 IEEHFYQSQHETCVGYAREVIQRLKDNI--LKRNVPGHASSDALYNPI 763
+ EH Y S+ T V A++ +Q ++ +I L+R + H++S N I
Sbjct: 1093 LREH-YMSKCNTEVAEAQQALQPVQQSIRELQRKI--HSNSPWWLNVI 1137
Score = 37 (18.1 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 4/8 (50%), Positives = 6/8 (75%)
Query: 1017 WWLEALHH 1024
WW+ L+H
Sbjct: 866 WWIRLLYH 873
>UNIPROTKB|E2R8G0 [details] [associations]
symbol:SHPRH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000786 "nucleosome" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR005818 Pfam:PF00176 Pfam:PF00538
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00490 SMART:SM00526
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00700000104571 KO:K15710 CTD:257218
OMA:FEGLVKQ EMBL:AAEX03000243 EMBL:AAEX03000244 RefSeq:XP_533438.2
Ensembl:ENSCAFT00000000517 GeneID:476233 KEGG:cfa:476233
Uniprot:E2R8G0
Length = 1685
Score = 753 (270.1 bits), Expect = 3.3e-99, Sum P(4) = 3.3e-99
Identities = 166/400 (41%), Positives = 229/400 (57%)
Query: 484 WCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTS 543
+C + A + PV+T ATLI+ P+ I QW EI RH R SL+ +Y+G +
Sbjct: 704 YCPHCLVAME-PVSTRATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPH 762
Query: 544 IMDISELVGADIVLTTYDVLKEDLSHDSDRHEG--DRRFMRFQKRYPVIPTLLTRIFWWR 601
L DIV+ TYDVL+ +L++ H D R +R QKRY IP+ L + WWR
Sbjct: 763 F-----LAEQDIVIITYDVLRSELNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWR 817
Query: 602 ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRW 661
ICLDEAQMVE A A EMA RL +RWCI+GTP+QR L+DL+GL+ FL P+ + W
Sbjct: 818 ICLDEAQMVECPAVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHW 877
Query: 662 WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEH 721
W+ ++ PY + + + F +I+ RS+K V D++Q+PPQ E + WL FSP+E H
Sbjct: 878 WVRLLYRPYCKKNP---QHLYSFIAKILWRSAKKDVIDQIQIPPQTEEIHWLHFSPVERH 934
Query: 722 FYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQ 781
FY QHE C A ++++ D LK + +L +T +L LL+LRQ
Sbjct: 935 FYHRQHEVCCQDAVVKLRKISDWALKLS--------SLDRRTVT-----SILYPLLRLRQ 981
Query: 782 ACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEKN 841
ACCHPQ LQ+S ++M+E+L L K E EEA R+LV ALNGLAGI +I+
Sbjct: 982 ACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGE 1041
Query: 842 LSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTEIL 881
+ A LY+E + EEH + D L +H HNL E+L
Sbjct: 1042 YALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELL 1081
Score = 160 (61.4 bits), Expect = 3.3e-99, Sum P(4) = 3.3e-99
Identities = 38/101 (37%), Positives = 50/101 (49%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
RPYQR A WM+Q+E + P D L+YNP++G +
Sbjct: 307 RPYQREAVNWMLQQEHFRSAPTNENALHFLWREIVTPEDL-----KLYYNPYTGCIIRDY 361
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAH-RKPASDDSI 390
+ GGILADEMGLGKTVE+LA I H R+ D++
Sbjct: 362 PNAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDAL 402
Score = 98 (39.6 bits), Expect = 3.3e-99, Sum P(4) = 3.3e-99
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 413 RVECICGAVSE-SRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMT 471
R ECICG + + RK + VQC C WQHA CV Y + K + + + ++
Sbjct: 660 RFECICGELDQVDRKPR---VQCLKCHLWQHAKCVNYEEKNLKIKPFYCPHCLVAMEPVS 716
Query: 472 N--IVVRDGEHIC-QWCDEL 488
++ IC QW DE+
Sbjct: 717 TRATLIISPSSICHQWVDEI 736
Score = 66 (28.3 bits), Expect = 3.3e-99, Sum P(4) = 3.3e-99
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 975 ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAE 1034
+ L++ Y+S + +++ AQQ + Q L + S WWL +H A E
Sbjct: 1102 KQLREHYMSKCNTEVAEAQQALQP-VQQTIKELQRKIYSNSPWWLNVIHRAI-EFAIDEE 1159
Query: 1035 LIRKIEEAISGS 1046
L +++ I+ +
Sbjct: 1160 LAQRVRNEITSN 1171
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 638 QRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYE 671
Q+ L + ++ L+ +S S WW+ VI E
Sbjct: 1120 QQALQPVQQTIKELQRKIYSNSPWWLNVIHRAIE 1153
Score = 44 (20.5 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 919 RKCQRVSREENSDFTDAEDPSGHLSD 944
RK Q+ SR+ S TD+E + SD
Sbjct: 534 RKIQKESRKSGSKDTDSEYLPSNTSD 559
>UNIPROTKB|Q149N8 [details] [associations]
symbol:SHPRH "E3 ubiquitin-protein ligase SHPRH"
species:9606 "Homo sapiens" [GO:0000786 "nucleosome" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR005818
Pfam:PF00176 Pfam:PF00271 Pfam:PF00538 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184
SMART:SM00249 SMART:SM00490 SMART:SM00526 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0016874 GO:GO:0008270 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 GO:GO:0000786 EMBL:AL356599 KO:K15710
EMBL:AY161136 EMBL:AY163808 EMBL:CR749290 EMBL:AL451145
EMBL:BC113089 EMBL:BC117685 EMBL:BC117686 EMBL:AK075318
EMBL:AK094944 EMBL:AB095943 IPI:IPI00470931 IPI:IPI00746978
IPI:IPI00845433 IPI:IPI00845497 RefSeq:NP_001036148.2
RefSeq:NP_775105.1 UniGene:Hs.723297 ProteinModelPortal:Q149N8
SMR:Q149N8 DIP:DIP-46277N IntAct:Q149N8 MINT:MINT-1370426
STRING:Q149N8 PhosphoSite:Q149N8 DMDM:146325723 PaxDb:Q149N8
PRIDE:Q149N8 Ensembl:ENST00000275233 Ensembl:ENST00000367505
Ensembl:ENST00000438092 Ensembl:ENST00000519632 GeneID:257218
KEGG:hsa:257218 UCSC:uc003qle.3 UCSC:uc003qlf.3 UCSC:uc003qlj.1
CTD:257218 GeneCards:GC06M146185 HGNC:HGNC:19336 HPA:HPA034854
MIM:608048 neXtProt:NX_Q149N8 PharmGKB:PA134880315
HOVERGEN:HBG059171 OrthoDB:EOG4G4GPJ GenomeRNAi:257218
NextBio:92973 ArrayExpress:Q149N8 Bgee:Q149N8 Genevestigator:Q149N8
Uniprot:Q149N8
Length = 1683
Score = 749 (268.7 bits), Expect = 6.0e-98, Sum P(4) = 6.0e-98
Identities = 165/400 (41%), Positives = 227/400 (56%)
Query: 484 WCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTS 543
+C + A + PV+T ATLI+ P+ I QW EI RH R SL+ +Y+G +
Sbjct: 702 YCPHCLVAME-PVSTRATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPH 760
Query: 544 IMDISELVGADIVLTTYDVLKEDLSHDSDRHEG--DRRFMRFQKRYPVIPTLLTRIFWWR 601
L DIV+ TYDVL+ +L++ H D R +R QKRY IP+ L + WWR
Sbjct: 761 F-----LAEQDIVIITYDVLRSELNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWR 815
Query: 602 ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRW 661
ICLDEAQMVE A EMA RL +RWCI+GTP+QR L+DL+GL+ FL P+ + W
Sbjct: 816 ICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHW 875
Query: 662 WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEH 721
W+ ++ PY + + + F +I+ RS+K V D++Q+PPQ E + WL FSP+E H
Sbjct: 876 WVRLLYRPYCKKNP---QHLYSFIAKILWRSAKKDVIDQIQIPPQTEEIHWLHFSPVERH 932
Query: 722 FYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQ 781
FY QHE C ++V+ +L R + S AL + +L LL+LRQ
Sbjct: 933 FYHRQHEVC---CQDVVVKL------RKI----SDWALKLSSLDRRTVTSILYPLLRLRQ 979
Query: 782 ACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEKN 841
ACCHPQ LQ+S ++M+E+L L K E EEA R+LV ALNGLAGI +I+
Sbjct: 980 ACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGE 1039
Query: 842 LSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTEIL 881
+ A LY+E + EEH + D L +H HNL E+L
Sbjct: 1040 YALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELL 1079
Score = 147 (56.8 bits), Expect = 6.0e-98, Sum P(4) = 6.0e-98
Identities = 37/101 (36%), Positives = 52/101 (51%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
RPYQR A WM+Q+E + + + L L+YNP++G +
Sbjct: 305 RPYQREAVNWMLQQECFRSSPATESALHFLWREI-VTSEGLK----LYYNPYTGCIIREY 359
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAH-RKPASDDSI 390
+ + GGILADEMGLGKTVE+LA I H R+ D++
Sbjct: 360 PNSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDAL 400
Score = 98 (39.6 bits), Expect = 6.0e-98, Sum P(4) = 6.0e-98
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 413 RVECICGAVSE-SRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMT 471
R ECICG + + RK + VQC C WQHA CV Y + K + + + ++
Sbjct: 658 RFECICGELDQIDRKPR---VQCLKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAMEPVS 714
Query: 472 N--IVVRDGEHIC-QWCDEL 488
++ IC QW DE+
Sbjct: 715 TRATLIISPSSICHQWVDEI 734
Score = 71 (30.1 bits), Expect = 6.0e-98, Sum P(4) = 6.0e-98
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 975 ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHA-EGNKDFSA 1033
+ L++ Y+S + +++ AQQ Q + L + S WWL +H A E D
Sbjct: 1100 KQLREHYMSKCNTEVAEAQQALYP-VQQTIHELQRKIHSNSPWWLNVIHRAIEFTID--E 1156
Query: 1034 ELIRKIEEAISGS 1046
EL++++ I+ +
Sbjct: 1157 ELVQRVRNEITSN 1169
Score = 38 (18.4 bits), Expect = 1.7e-94, Sum P(4) = 1.7e-94
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 890 ELSQNEQHFPGCSEKAFKIHSIETCDENARKCQRVSRE 927
+LS +E+ F C F + T E KCQ++ RE
Sbjct: 1176 KLSMSEK-FRDCRGLQFLL---TTQMEELNKCQKLVRE 1209
Score = 37 (18.1 bits), Expect = 2.1e-08, Sum P(4) = 2.1e-08
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 638 QRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYE 671
Q+ L + + L+ S S WW+ VI E
Sbjct: 1118 QQALYPVQQTIHELQRKIHSNSPWWLNVIHRAIE 1151
>UNIPROTKB|E1BLB1 [details] [associations]
symbol:SHPRH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000786 "nucleosome" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR005818 Pfam:PF00176 Pfam:PF00538
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00490 SMART:SM00526
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00700000104571 OMA:FEGLVKQ
EMBL:DAAA02026947 IPI:IPI00711948 Ensembl:ENSBTAT00000010673
Uniprot:E1BLB1
Length = 1688
Score = 764 (274.0 bits), Expect = 1.6e-96, Sum P(4) = 1.6e-96
Identities = 169/400 (42%), Positives = 229/400 (57%)
Query: 484 WCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTS 543
+C + A + PV+T ATLI+ P+ I QW EI RH R SL+ +Y+G +
Sbjct: 707 YCPHCLVAME-PVSTRATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPH 765
Query: 544 IMDISELVGADIVLTTYDVLKEDLSHDSDRHEG--DRRFMRFQKRYPVIPTLLTRIFWWR 601
L DIV+ TYDVL+ +L++ H D R +R QKRY IP+ L + WWR
Sbjct: 766 F-----LAEQDIVIITYDVLRSELNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWR 820
Query: 602 ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRW 661
ICLDEAQMVE A A EMA RL +RWCI+GTP+QR L+DL+GL+ FL P+ + W
Sbjct: 821 ICLDEAQMVECPAVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGVEPYCVRHW 880
Query: 662 WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEH 721
W+ ++ PY + F + F +IM RS+K V D++Q+PPQ E WL FSP+E H
Sbjct: 881 WVRLLYRPYCKKNP---HFLYSFIAKIMWRSAKKDVIDQIQIPPQTEETHWLHFSPVERH 937
Query: 722 FYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQ 781
FY QHE C A ++++ D LK + +L +T +L LL+LRQ
Sbjct: 938 FYHRQHEVCCQDAVVKLRKISDWALKLS--------SLDRRTVT-----SILYPLLRLRQ 984
Query: 782 ACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEKN 841
ACCHPQ LQ+S ++M+E+L L K E EEA R+LV ALNGLAGI +I+
Sbjct: 985 ACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGE 1044
Query: 842 LSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTEIL 881
+ A LY+E + EEH E + D L +H HNL E+L
Sbjct: 1045 YALAAELYREVLRSSEEHKEKLKTDSLQRLHATHNLMELL 1084
Score = 148 (57.2 bits), Expect = 1.6e-96, Sum P(4) = 1.6e-96
Identities = 37/101 (36%), Positives = 51/101 (50%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
RPYQR A WM+Q+E + + + L L+YNP++G +
Sbjct: 310 RPYQREAVNWMLQQEHFKSTPASENALHFLWREI-VTSEGLK----LYYNPYTGCIIREY 364
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAH-RKPASDDSI 390
+ GGILADEMGLGKTVE+LA I H R+ D++
Sbjct: 365 PNAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDAL 405
Score = 83 (34.3 bits), Expect = 1.6e-96, Sum P(4) = 1.6e-96
Identities = 24/80 (30%), Positives = 36/80 (45%)
Query: 413 RVECICGAVSE-SRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMT 471
R CICG + + K + VQC C WQHA CV Y + K + + + ++
Sbjct: 663 RFGCICGELDQVDCKPR---VQCLKCHLWQHAKCVNYEEKNLKIKPFYCPHCLVAMEPVS 719
Query: 472 N--IVVRDGEHIC-QWCDEL 488
++ IC QW DE+
Sbjct: 720 TRATLIISPSSICHQWVDEI 739
Score = 56 (24.8 bits), Expect = 1.6e-96, Sum P(4) = 1.6e-96
Identities = 16/72 (22%), Positives = 31/72 (43%)
Query: 975 ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAE 1034
+ L++ Y+S + +++ AQQ Q L + S WWL + A E
Sbjct: 1105 KQLREHYMSKCNTEVAEAQQALLP-VQQTIRDLQRKIHSNSPWWLNVIQRAI-EFGIEEE 1162
Query: 1035 LIRKIEEAISGS 1046
L +++ I+ +
Sbjct: 1163 LAQRVRNEITSN 1174
Score = 45 (20.9 bits), Expect = 1.0e-07, Sum P(4) = 1.0e-07
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 638 QRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENG 673
Q+ L + +R L+ S S WW+ VI+ E G
Sbjct: 1123 QQALLPVQQTIRDLQRKIHSNSPWWLNVIQRAIEFG 1158
Score = 41 (19.5 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 919 RKCQRVSREENSDFTDAEDPSGHLSD 944
RK Q+ SR+ + TD+E + SD
Sbjct: 537 RKTQKESRKSGNKDTDSEYLPSNTSD 562
Score = 37 (18.1 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 988 KLSVAQQEFRKSYMQVCNA-LDDREKQY--SAWWLEALHHAEGNKDFSAELIRKIEEAIS 1044
K ++ +E S + C ++ +Q + L +H +G +AEL R E +
Sbjct: 1001 KSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYR---EVLR 1057
Query: 1045 GSLNKSRALRTAS 1057
S L+T S
Sbjct: 1058 SSEEHKEKLKTDS 1070
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(4) = 1.0e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 836 ALIEKNLSQA-VSLYKEAMAVVEEHSEDFRLDPLLNIHL 873
AL + N+ A +S K +E+ F+ DP +NI L
Sbjct: 1552 ALTDNNMEFAQISRVK----TFQENLSAFKYDPQINILL 1586
>UNIPROTKB|F1S736 [details] [associations]
symbol:SHPRH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000786 "nucleosome" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR005818 Pfam:PF00176 Pfam:PF00538
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51194 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00490 SMART:SM00526
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00700000104571 OMA:FEGLVKQ
EMBL:CU234205 EMBL:CU019540 Ensembl:ENSSSCT00000004555
Uniprot:F1S736
Length = 1688
Score = 769 (275.8 bits), Expect = 8.1e-94, Sum P(4) = 8.1e-94
Identities = 191/509 (37%), Positives = 268/509 (52%)
Query: 384 PASDDSIFID-TAVQVTDDQKVNLRRLKRERVECICGA--------VSESRKYKGLWVQC 434
PA DS D T + T +V + +++VE + A V G +C
Sbjct: 607 PAPGDSGITDVTTSESTCVFEVKQEQAAKDQVESVTPAGGDIPHSNVMSPNNSSGYRFEC 666
Query: 435 DICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMTNIVVRDGEHICQWCDELIEATDS 494
IC ADC PR + + +L +H + + ++ C C +E
Sbjct: 667 -ICGELDQADC---KPRVQCLKC--QLWQHAKCVNYEEKNLKIKPFYCPHCLVAME---- 716
Query: 495 PVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD 554
PV+T ATLI+ P+ I QW EI RH R SL+ +Y+G + L D
Sbjct: 717 PVSTRATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHF-----LAEQD 771
Query: 555 IVLTTYDVLKEDLSHDSDRHEG--DRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVES 612
IV+ TYDVL+ +L++ H D R +R QKRY IP+ L + WWRICLDEAQMVE
Sbjct: 772 IVIITYDVLRSELNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVEC 831
Query: 613 NAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYEN 672
A A EMA RL +RWCI+GTP+QR L+DL+GL+ FL P+ + WW+ ++ PY
Sbjct: 832 PAVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCK 891
Query: 673 GDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQSQHETCVG 732
+ + + F +I+ RS+K V D++Q+PPQ E + WL FSP+E HFY QHE C
Sbjct: 892 KNPQPL---YSFIAKILWRSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQ 948
Query: 733 YAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCHPQVGSSG 792
A ++++ D LK + +L +T +L LL+LRQACCHPQ
Sbjct: 949 DAVVKLRKISDWALKLS--------SLDRRTVT-----SILYPLLRLRQACCHPQAVRGE 995
Query: 793 LRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEKNLSQAVSLYKEA 852
LQ+S ++M+E+L L K E EEA R+LV ALNGLAGI +I+ + A LY+E
Sbjct: 996 FLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREV 1055
Query: 853 MAVVEEHSEDFRLDPLLNIHLHHNLTEIL 881
+ EEH E + D L +H HNL E+L
Sbjct: 1056 LRSSEEHKEKLKTDSLQRLHATHNLMELL 1084
Score = 147 (56.8 bits), Expect = 8.1e-94, Sum P(4) = 8.1e-94
Identities = 37/101 (36%), Positives = 51/101 (50%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
RPYQR A WM+Q+E + + + L L+YNP++G +
Sbjct: 310 RPYQREAVNWMLQQEHFRSAPASENALHFLWREI-VTSEGLK----LYYNPYTGCIIREY 364
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAH-RKPASDDSI 390
+ GGILADEMGLGKTVE+LA I H R+ D++
Sbjct: 365 PNAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDAL 405
Score = 67 (28.6 bits), Expect = 8.1e-94, Sum P(4) = 8.1e-94
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 975 ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAE 1034
+ L++ Y+S + +++ AQQ Q L + S WWL +H A E
Sbjct: 1105 KQLREHYMSKCNTEVAEAQQALLP-VQQTIRDLQRKIYSNSPWWLNVIHRAI-EFGIEEE 1162
Query: 1035 LIRKIEEAISGS 1046
L++++ I+ +
Sbjct: 1163 LVQRVRNEITSN 1174
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 638 QRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENG 673
Q+ L + +R L+ +S S WW+ VI E G
Sbjct: 1123 QQALLPVQQTIRDLQRKIYSNSPWWLNVIHRAIEFG 1158
Score = 42 (19.8 bits), Expect = 8.1e-94, Sum P(4) = 8.1e-94
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 35 SEQPEKEELADVDHPFFVEVNRTCWLLDEHLDIS-EIVLTDLKLR 78
S+ +KEE + P V++N + HLD S + +L +L L+
Sbjct: 79 SKSIDKEETGGISSPLSVKLNIV--ISPYHLDNSWKALLGELTLQ 121
Score = 41 (19.5 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 919 RKCQRVSREENSDFTDAEDPSGHLSD 944
RK Q+ SR+ + TD+E + SD
Sbjct: 537 RKIQKESRKSGNKDTDSEYLPSNTSD 562
>UNIPROTKB|K4DI94 [details] [associations]
symbol:SHPRH "SNF2 histone linker PHD RING helicase,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0000786 "nucleosome"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR005818
Pfam:PF00176 Pfam:PF00271 Pfam:PF00538 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184 SMART:SM00249
SMART:SM00490 SMART:SM00526 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 EMBL:CH471051
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 GO:GO:0006334
GO:GO:0000786 EMBL:AL356599 EMBL:AL451145 HGNC:HGNC:19336
OMA:FEGLVKQ Ensembl:ENST00000367503 Uniprot:K4DI94
Length = 1687
Score = 726 (260.6 bits), Expect = 6.7e-91, Sum P(4) = 6.7e-91
Identities = 168/409 (41%), Positives = 229/409 (55%)
Query: 484 WCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTS 543
+C + A + PV+T ATLI+ P+ I QW EI RH R SL+ +Y+G +
Sbjct: 702 YCPHCLVAME-PVSTRATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPH 760
Query: 544 IMDISELVGADIVLTTYDVLKEDLSHDSDRHEG--DRRFMRFQKRYPVIPTLLTRIFWWR 601
L DIV+ TYDVL+ +L++ H D R +R QKRY IP+ L + WWR
Sbjct: 761 F-----LAEQDIVIITYDVLRSELNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWR 815
Query: 602 ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRW 661
ICLDEAQMVE A EMA RL +RWCI+GTP+QR L+DL+GL+ FL P+ + W
Sbjct: 816 ICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHW 875
Query: 662 WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEH 721
W+ ++ PY + + + F +I+ RS+K V D++Q+PPQ E + WL FSP+E H
Sbjct: 876 WVRLLYRPYCKKNP---QHLYSFIAKILWRSAKKDVIDQIQIPPQTEEIHWLHFSPVERH 932
Query: 722 FYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQ 781
FY QHE C ++V+ +L R + S AL + +L LL+LRQ
Sbjct: 933 FYHRQHEVC---CQDVVVKL------RKI----SDWALKLSSLDRRTVTSILYPLLRLRQ 979
Query: 782 ACCHPQ-VGSSGL---RSLQQSPLS-----MDEILMVLIGKTKIEGEEALRKLVMALNGL 832
ACCHPQ V L +S +QS S M+E+L L K E EEA R+LV ALNGL
Sbjct: 980 ACCHPQAVRGEFLPLQKSFEQSTFSFSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGL 1039
Query: 833 AGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTEIL 881
AGI +I+ + A LY+E + EEH + D L +H HNL E+L
Sbjct: 1040 AGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELL 1088
Score = 147 (56.8 bits), Expect = 6.7e-91, Sum P(4) = 6.7e-91
Identities = 37/101 (36%), Positives = 52/101 (51%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
RPYQR A WM+Q+E + + + L L+YNP++G +
Sbjct: 305 RPYQREAVNWMLQQECFRSSPATESALHFLWREI-VTSEGLK----LYYNPYTGCIIREY 359
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAH-RKPASDDSI 390
+ + GGILADEMGLGKTVE+LA I H R+ D++
Sbjct: 360 PNSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDAL 400
Score = 98 (39.6 bits), Expect = 6.7e-91, Sum P(4) = 6.7e-91
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 413 RVECICGAVSE-SRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMT 471
R ECICG + + RK + VQC C WQHA CV Y + K + + + ++
Sbjct: 658 RFECICGELDQIDRKPR---VQCLKCHLWQHAKCVNYDEKNLKIKPFYCPHCLVAMEPVS 714
Query: 472 N--IVVRDGEHIC-QWCDEL 488
++ IC QW DE+
Sbjct: 715 TRATLIISPSSICHQWVDEI 734
Score = 73 (30.8 bits), Expect = 6.7e-91, Sum P(4) = 6.7e-91
Identities = 21/88 (23%), Positives = 40/88 (45%)
Query: 975 ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHA-EGNKDFSA 1033
+ L++ Y+S + +++ AQQ Q + L + S WWL +H A E D
Sbjct: 1109 KQLREHYMSKCNTEVAEAQQALYP-VQQTIHELQRKIHSNSPWWLNVIHRAIEFTID--E 1165
Query: 1034 ELIRKIEEAISGSLNKSRALRTASRTSL 1061
EL++++ I+ + + + S L
Sbjct: 1166 ELVQRVRNEITSNYKQQTGKLSMSEKGL 1193
Score = 43 (20.2 bits), Expect = 9.1e-88, Sum P(4) = 9.1e-88
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 869 LN-IHLHHNLTEILPMVANCATELSQNEQHFPG---CSEKAFKIHSIETCDENARKCQRV 924
LN IH T +V E++ N + G SEK + + T E KCQ++
Sbjct: 1152 LNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKGLQF-LLTTQMEELNKCQKL 1210
Query: 925 SRE 927
RE
Sbjct: 1211 VRE 1213
Score = 37 (18.1 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 638 QRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYE 671
Q+ L + + L+ S S WW+ VI E
Sbjct: 1127 QQALYPVQQTIHELQRKIHSNSPWWLNVIHRAIE 1160
>RGD|1310342 [details] [associations]
symbol:Shprh "SNF2 histone linker PHD RING helicase, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR005818 Pfam:PF00176 Pfam:PF00538 PROSITE:PS50089
PROSITE:PS51194 PROSITE:PS51504 SMART:SM00184 SMART:SM00249
SMART:SM00526 RGD:1310342 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 GO:GO:0006334 GO:GO:0000786
GeneTree:ENSGT00700000104571 KO:K15710 CTD:257218 OrthoDB:EOG4G4GPJ
EMBL:CH473994 IPI:IPI00869721 RefSeq:NP_001100940.1 UniGene:Rn.2515
Ensembl:ENSRNOT00000019893 GeneID:308282 KEGG:rno:308282
UCSC:RGD:1310342 NextBio:658533 Uniprot:D4A9B2
Length = 1701
Score = 711 (255.3 bits), Expect = 1.1e-88, Sum P(5) = 1.1e-88
Identities = 167/420 (39%), Positives = 228/420 (54%)
Query: 484 WCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTS 543
+C + A + PV+T ATLI+ P+ I QW EI RH R SL+ +Y+G +
Sbjct: 700 YCPHCLVAME-PVSTRATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPH 758
Query: 544 IMDISELVGADIVLTTYDVLKEDLSHDSDRHEG--DRRFMRFQKRYPVIPTLLTRIFWWR 601
L DIV+ TYDVL+ +L++ H D R +R QKRY IP+ L + WWR
Sbjct: 759 F-----LAEQDIVIITYDVLRSELNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWR 813
Query: 602 ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRW 661
ICLDEAQMVE A EMA RL +RWC++GTP+QR L+DL+GL+ FL P+ + W
Sbjct: 814 ICLDEAQMVECPTVKAAEMAQRLSGINRWCVSGTPVQRGLEDLFGLVVFLGIEPYCVKHW 873
Query: 662 WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEH 721
WI ++ PY + + + F +IM RS+K V D++Q+PPQ E + WL FSP+E H
Sbjct: 874 WIRLLYHPYCKKNP---QHLYSFIAKIMWRSAKKDVIDQIQIPPQTEEMHWLHFSPVERH 930
Query: 722 FYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQ 781
FY QHE C A ++++ D LK SS + + +L LL+LRQ
Sbjct: 931 FYHRQHEVCCQDAVVKLRKISDWALK------LSS-------LDRRTVSSILYPLLRLRQ 977
Query: 782 ACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEKN 841
ACCHPQ LQ+S ++M+E+L L K E EEA R+LV ALNGLAGI +I+
Sbjct: 978 ACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGR 1037
Query: 842 LSQ--------------------AVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTEIL 881
+Q A LY+E + EEH + D L +H HNL E+L
Sbjct: 1038 RAQYRAALALPPPECVILSEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELL 1097
Score = 155 (59.6 bits), Expect = 1.1e-88, Sum P(5) = 1.1e-88
Identities = 39/101 (38%), Positives = 54/101 (53%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
RPYQR A WM+Q+E+ + P D L+ L+YNP++G +
Sbjct: 299 RPYQREAVNWMLQQEQF-RSTPADNSLHFLWREIVTP-DGLN----LYYNPYTGCIIRDF 352
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAH-RKPASDDSI 390
+ + GGILADEMGLGKTVE+LA I H R+ D++
Sbjct: 353 PHAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVRQDAL 393
Score = 96 (38.9 bits), Expect = 1.1e-88, Sum P(5) = 1.1e-88
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 413 RVECICGAVSE-SRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMT 471
R ECICG + RK + VQC C WQHA CV Y + K + + + ++
Sbjct: 656 RFECICGEFDQIGRKPR---VQCLKCHLWQHAKCVNYEEKNLKVKPFYCPHCLVAMEPVS 712
Query: 472 N--IVVRDGEHIC-QWCDEL 488
++ IC QW DE+
Sbjct: 713 TRATLIISPSSICHQWVDEI 732
Score = 72 (30.4 bits), Expect = 1.1e-88, Sum P(5) = 1.1e-88
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 975 ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAE 1034
+ L++ Y+S + +++ AQQ + Q L + S WWL +H A E
Sbjct: 1118 KQLREHYMSKCNTEVAEAQQALQP-VQQSIRELQRKVHSGSPWWLNVVHRAM-EYAVDEE 1175
Query: 1035 LIRKIEEAISGS 1046
L++++ IS +
Sbjct: 1176 LVQRVRNEISSN 1187
Score = 54 (24.1 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 638 QRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHV 697
Q+ L + +R L+ S S WW+ V+ E V E + EI S+ H
Sbjct: 1136 QQALQPVQQSIRELQRKVHSGSPWWLNVVHRAMEYA-VDE-ELVQRVRNEIS--SNYKHQ 1191
Query: 698 SDELQLPPQ-EEC--VSWLTFSPIEE-HFYQ 724
+D+L + + +C + +L + +EE H +Q
Sbjct: 1192 TDKLSMSEKFRDCRGLQFLLTTQMEELHKFQ 1222
Score = 42 (19.8 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 718 IEEHFYQSQHETCVGYAREVIQRLKDNI--LKRNVPGHASS 756
+ EH Y S+ T V A++ +Q ++ +I L+R V H+ S
Sbjct: 1120 LREH-YMSKCNTEVAEAQQALQPVQQSIRELQRKV--HSGS 1157
Score = 37 (18.1 bits), Expect = 1.1e-88, Sum P(5) = 1.1e-88
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 36 EQPEKEELADVDHPFFVEVNR 56
+Q K DV HP + V R
Sbjct: 279 QQEAKSVQVDVQHPALIPVLR 299
Score = 37 (18.1 bits), Expect = 6.5e-09, Sum P(4) = 6.5e-09
Identities = 4/8 (50%), Positives = 6/8 (75%)
Query: 1017 WWLEALHH 1024
WW+ L+H
Sbjct: 873 WWIRLLYH 880
>DICTYBASE|DDB_G0287171 [details] [associations]
symbol:DDB_G0287171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 dictyBase:DDB_G0287171
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AAFI02000098 KO:K15710 RefSeq:XP_637376.1
ProteinModelPortal:Q54KQ4 EnsemblProtists:DDB0233435 GeneID:8625998
KEGG:ddi:DDB_G0287171 InParanoid:Q54KQ4 OMA:QKKANEC Uniprot:Q54KQ4
Length = 1872
Score = 623 (224.4 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 167/487 (34%), Positives = 251/487 (51%)
Query: 407 RRLKRERVECICGAVSESRKYKGLWVQCDICDAWQHADCVGYS-PRGKK-RRSTFELKKH 464
+RL + + CICG ES K +G WV+C+ C+ +Q++ CV S PR + + F +
Sbjct: 672 KRLNGDIISCICGKDEESHK-RGNWVKCNSCNKFQYSSCVWASNPRYRGISKFYFCTRCV 730
Query: 465 TRKKDMTNIVVRDG--EHICQWCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTR 522
T +D ++ +D E+ +W DE + V + ATLIV P I QW EI +HT
Sbjct: 731 TVPRD-PSLTHQDDQEEYENRW-DET-----TLVGSRATLIVAPNTIFTQWQEEIVKHTN 783
Query: 523 PGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMR 582
LK IY G ++ + D D+VLTTYDVL +D + G + +R
Sbjct: 784 --GLKVYIYNGIYKDKINPFQLADY------DLVLTTYDVLSDDSICLTQISAGKQ--LR 833
Query: 583 FQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAA-TEMALRLYAKHRWCITGTPIQRKL 641
+ K P + L I WWRICLDEAQMVES++ ++AL L + +RWC+TGTPIQR L
Sbjct: 834 YTK-IPTPKSALKCIKWWRICLDEAQMVESSSQTKYKKLALGLESHYRWCLTGTPIQRSL 892
Query: 642 DDLYGLLRFLKSSPFSISRWWIEVIRDPY-ENGDVGAMEFTHKFFKEIMCRSSKVHVSDE 700
DD++GL FL+ PFS WW +I Y G+ +++ H +M R+SK + +E
Sbjct: 893 DDMFGLFEFLRLEPFSSRYWWNCIILHKYLALGEQSFLDWFHCIVHSVMIRNSKAMIRNE 952
Query: 701 LQLPPQ-EECVSWLTFSPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDAL 759
LQLP Q + L FS +E H+YQ + C AR + Q+ G + D
Sbjct: 953 LQLPNQYDNDTKLLRFSMVEAHYYQKKANECSQEARLLFQKYFRG-------GRSIQDIS 1005
Query: 760 YNPIITHAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGE 819
I+H + +L LL LRQ C H QVG ++ L S ++M+++L LI IE +
Sbjct: 1006 ----ISHLNS--ILAPLLVLRQTCQHFQVGGHAVKPLTMSTMTMEQLLDRLIENATIEAK 1059
Query: 820 EALRKLVMALNGLAGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLTE 879
+ ++ +LN LA +I S A LY +A+ + + + F++D +H +NL
Sbjct: 1060 NHQKSVIHSLNCLAAARIIRNEFSIASQLYLDAINMFKSNENHFKVDWFQELHTFYNLNF 1119
Query: 880 ILPMVAN 886
+ N
Sbjct: 1120 LFKQFKN 1126
Score = 123 (48.4 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 31/68 (45%), Positives = 38/68 (55%)
Query: 330 FLDTYSTLFYNPFSGSLSLSPDYTSSY-----VFGGILADEMGLGKTVELLACIFAHRKP 384
FL FYN F+G L+L S + GGILADEMGLGKTVE L + +H KP
Sbjct: 517 FLVDKREFFYNQFTGRLTLKEVLLSDKKDDLSLMGGILADEMGLGKTVEFLGLVLSHPKP 576
Query: 385 ASDDSIFI 392
D ++ I
Sbjct: 577 --DKNVII 582
Score = 70 (29.7 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 974 CENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREK 1012
CE L+ YL G + ++ Q+EF + + +V ALD+ +K
Sbjct: 1186 CEKLRNSYLQGKNHQMLQNQKEFEEYHQKVNEALDEYDK 1224
Score = 59 (25.8 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 14/58 (24%), Positives = 23/58 (39%)
Query: 250 NDVSASQKHASFDVARFYEAIKRSK--AEPMXXXXXXXXXXXXRPYQRRAAYWMVQRE 305
N+ +K F++ Y+ +K E +PYQ +A WM+ RE
Sbjct: 418 NNNREKKKRFIFNITELYDNVKMDSDAVEISKSKFNGQMISTLKPYQLKAVNWMLNRE 475
Score = 40 (19.1 bits), Expect = 1.4e-65, Sum P(4) = 1.4e-65
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 1000 YMQVCNALDDREKQYSAWWLEALH 1023
Y+ N E + W + LH
Sbjct: 1089 YLDAINMFKSNENHFKVDWFQELH 1112
>POMBASE|SPAC144.05 [details] [associations]
symbol:SPAC144.05 "ATP-dependent DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 PomBase:SPAC144.05 Prosite:PS00518
GO:GO:0005524 EMBL:CU329670 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 GO:GO:0004842 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008094 KO:K15710 OMA:HTWGVSG OrthoDB:EOG4Q2HPM PIR:T37672
RefSeq:NP_594666.1 ProteinModelPortal:Q9UTL9
EnsemblFungi:SPAC144.05.1 GeneID:2542902 KEGG:spo:SPAC144.05
NextBio:20803941 Uniprot:Q9UTL9
Length = 1375
Score = 326 (119.8 bits), Expect = 1.7e-35, Sum P(4) = 1.7e-35
Identities = 83/227 (36%), Positives = 127/227 (55%)
Query: 500 ATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTT 559
ATLI+ P+ IL QW +EI H P SLK Y+G R S+ + + DIV+T+
Sbjct: 332 ATLIITPSTILDQWLSEIDLHV-P-SLKVFHYQGIRKSN----GLKSAKIFLDCDIVVTS 385
Query: 560 YDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATE 619
Y L+ +L + ++ H R +R +KR+ + L + WWRIC+DEAQMVE++ + +
Sbjct: 386 YSDLRFELLY-TESHS---RTLRHEKRHVSPKSPLIDVCWWRICVDEAQMVETSQSNVAQ 441
Query: 620 MALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI--SRWWIEVIRDPYENGDVGA 677
M R+ + W ++GTP++ ++DDL+GLL L+ SP + + W+++I E V
Sbjct: 442 MIYRIPRVNCWTVSGTPVRSEVDDLFGLLFLLRYSPMYLYKKQAWMQII----EKKRV-- 495
Query: 678 MEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQ 724
EF F ++CR SK V +EL+LPPQ S +EE YQ
Sbjct: 496 REFCD-LFGSLVCRHSKQDVEEELKLPPQHRICMTTRLSVVEETNYQ 541
Score = 112 (44.5 bits), Expect = 1.7e-35, Sum P(4) = 1.7e-35
Identities = 43/153 (28%), Positives = 66/153 (43%)
Query: 253 SASQKHASFDV--ARFYE-AIKRSKAEPMXXXXXX-XXXXXXRPYQRRAAYWMVQREKGD 308
S ++++ D+ A FY+ A K +K+ P+Q R WM +RE+
Sbjct: 177 SEDEEYSCLDINTALFYDCARKLAKSLRFANVSRDPRLSSELLPFQMRVLEWMKRREE-- 234
Query: 309 XXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSPDYT----SSYVFGGILAD 364
PL L ++ N G ++ S + T S + GGILAD
Sbjct: 235 ----EKFLTSNDLPPLWYHCKSLFDDRMVYVNHVYGYMTFSKEKTYLLASGDIRGGILAD 290
Query: 365 EMGLGKTVELLACIFAHRKPAS-DDSIFIDTAV 396
EMG+GKT+E+L + H+ P S D+ D V
Sbjct: 291 EMGMGKTLEVLGLVLHHQLPISLTDTCTFDQVV 323
Score = 97 (39.2 bits), Expect = 1.7e-35, Sum P(4) = 1.7e-35
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 776 LLKLRQACCHPQVGSSGLRSLQQSPL-SMDEILMVLIGKTKIEGEEALRKLVMALNGLAG 834
L++LRQACCHPQVG + P+ S++++L+ ++ +T RKL +
Sbjct: 571 LVRLRQACCHPQVGFGNKSAFGGGPMKSINDVLVFMLEQTNSTFSSLNRKLYSDKIIVGQ 630
Query: 835 IALIEKNLSQAVSLYKEAMAVVE 857
I K+ ++A++++ E VE
Sbjct: 631 IYDHIKDYNKALAIWSEVRIPVE 653
Score = 44 (20.5 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 39/197 (19%), Positives = 79/197 (40%)
Query: 724 QSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQAC 783
Q + + + Y ++ +Q + D+++ P S+ +L N + + K LNS++
Sbjct: 959 QLTYNSRIEYYKQ-LQEISDSLM----PPPVSNISLNNYVKDDEKKQKFLNSVIIKASVI 1013
Query: 784 CHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGE-EALRKLVMAL-NGLAGIALIEKN 841
++ + Q + ++ E++ I + I G LR+L N IA E
Sbjct: 1014 LEKEISEKQDEASQTTNVA--ELVNQKISEMNIPGHIHLLRELEEEKSNTQRKIAHFESR 1071
Query: 842 LSQAVSLYKEAMAVVEEHS-----EDFRLDPLLNI--HLHHN--LTEILPMVANCA---T 889
+LY+ + E H D + HL+ + L L ++C T
Sbjct: 1072 RRYLTNLYEHIVLKAESHQICIICRDIIKQGFITTCGHLYCSFCLEAWLKHSSSCPMCKT 1131
Query: 890 ELSQNEQHFPGCSEKAF 906
+L++N ++ G S +
Sbjct: 1132 KLNKNNAYYIGESRDIY 1148
Score = 42 (19.8 bits), Expect = 2.7e-28, Sum P(4) = 2.7e-28
Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 51 FVEVNRTCWLLDEHLDISEIVLTDLKLREEFSGFIISED----FYQV-SRYTLRL-HVCH 104
F V+R L E L VL +K REE F+ S D +Y S + R+ +V H
Sbjct: 205 FANVSRDPRLSSELLPFQMRVLEWMKRREE-EKFLTSNDLPPLWYHCKSLFDDRMVYVNH 263
Query: 105 VNEFIGRIKLGHWPLLSSNDV 125
V ++ K + LL+S D+
Sbjct: 264 VYGYMTFSKEKTY-LLASGDI 283
Score = 40 (19.1 bits), Expect = 2.8e-30, Sum P(3) = 2.8e-30
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 718 IEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGH 753
+E+ + Q E V + + I + N+PGH
Sbjct: 1014 LEKEISEKQDEA--SQTTNVAELVNQKISEMNIPGH 1047
Score = 39 (18.8 bits), Expect = 1.7e-35, Sum P(4) = 1.7e-35
Identities = 7/29 (24%), Positives = 18/29 (62%)
Query: 973 VCENLKQKYLSGFSVKLSVAQQEFRKSYM 1001
+ ++L++K +S +K S +EF + ++
Sbjct: 721 LAQDLRRKIMSDVIIKTSKHLEEFSEKFI 749
Score = 39 (18.8 bits), Expect = 1.7e-35, Sum P(4) = 1.7e-35
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 978 KQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAELIR 1037
KQK+L+ +K SV ++ ++ D+ + + L +E N L+R
Sbjct: 999 KQKFLNSVIIKASVILEK------EISEKQDEASQTTNVAELVNQKISEMNIPGHIHLLR 1052
Query: 1038 KIEEAISGSLNK 1049
++EE S + K
Sbjct: 1053 ELEEEKSNTQRK 1064
>ASPGD|ASPL0000031617 [details] [associations]
symbol:AN10707 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 Prosite:PS00518 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:BN001305 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:HTWGVSG
EnsemblFungi:CADANIAT00003281 HOGENOM:HOG000181800 Uniprot:C8VFF9
Length = 1415
Score = 346 (126.9 bits), Expect = 6.0e-33, Sum P(2) = 6.0e-33
Identities = 150/548 (27%), Positives = 251/548 (45%)
Query: 498 TGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA-RNSSLSDTSIMDISELVGADIV 556
+GATLI+ P IL QW EI H P L+ Y G R+ +LSD ++++ + D+V
Sbjct: 320 SGATLIITPPVILGQWKQEIELHA-P-KLQVFHYTGIQRHPTLSDQELVEL--MADNDVV 375
Query: 557 LTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAA 616
LTTY+VL ++ + +R +R +KR+ + L +I WWR+CLDEAQM+ES +
Sbjct: 376 LTTYNVLAREIHYAG---VAPKRNLRHEKRFEPRKSPLIKISWWRVCLDEAQMIESGISN 432
Query: 617 ATEMALRLYAKH-RWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGDV 675
A ++A RL +H W +TGTP+++ + DL GLL FL+ PF W + D
Sbjct: 433 AAKVA-RLIPRHIAWAVTGTPLRKDVTDLLGLLLFLRYEPFC-GPIWKRLC-------DA 483
Query: 676 GAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFY-QSQHETCVGYA 734
+ I R SK + +EL LPPQ+ V + F+ +EE Y Q E C
Sbjct: 484 TFKPVLARIVNTITLRHSKNFIREELHLPPQKRIVITVPFTAVEEQSYRQLYEEMCEDCG 543
Query: 735 REVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCHPQVGSSGLR 794
+ ++N N P +I ++ + L++LRQ+C +P +
Sbjct: 544 LDSSGSPRNNDWNPNDPS----------VID-----RMRSWLVRLRQSCLYPTGNRRKVF 588
Query: 795 SLQQSPL-SMDEILMVLIGKTK--IEGEEALRKLVMALNGLAGIALIE--KNLSQAVSLY 849
+ PL S++++L V+I + I EE R L+ L+ L L+E K +A+SL+
Sbjct: 589 AAGNGPLRSVNDVLEVMIDQNDALIHAEE--RSLL--LSQLRRGQLLENAKLKREALSLW 644
Query: 850 KEAMA----VVEEHSEDFR------LDPLLNIHLHHNLTEILPMVANCATELSQNEQ-H- 897
K ++ V++ E + L PL N H E L + + E +N + H
Sbjct: 645 KNSLHRASDTVQQCRERLQTERKKQLTPLAN-GAHD---ERLSFSDDESEETEKNSRLHV 700
Query: 898 FPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDR--K 955
F A ++ I Q S E + D+E+ L+ L E + + +
Sbjct: 701 FRQRLRTALEVEHIAVFFTGNAYFQIKSDHELTK-PDSEEFQA-LTKLEEEAYAKAKLIR 758
Query: 956 XXXXXXXXXXXXXXLITVCENLKQK-YLSGFSVKLSVAQQ--EFRKSYMQV---CNALDD 1009
+ + E ++K +++ +KL + + E R+ + ++ C+ ++D
Sbjct: 759 QEMLTEISRKAKHYVKRIKEKAEKKDFVAIPEMKLHMYSKGLESRRVFERLQDFCDMMND 818
Query: 1010 REKQYSAW 1017
QY W
Sbjct: 819 HAAQYKEW 826
Score = 108 (43.1 bits), Expect = 6.0e-33, Sum P(2) = 6.0e-33
Identities = 44/195 (22%), Positives = 82/195 (42%)
Query: 210 WKKSMINVMSWLR-PEVLTSEA-RYGVSKSMEMDVELMTRTKNDVSASQKHASFDVARFY 267
W+ S+ ++ + R P+ ++ RY + + + D + RT+ ++ D FY
Sbjct: 121 WRDSL-DITDYQRLPDAASAAFFRYVLGEDKDYDPFRIRRTRGPIARGDGWTPQD---FY 176
Query: 268 EAIK--RSKAEPMXXXXXXXXXXXXRPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLC 325
+ + R+ E P+QRRA W++ RE + +
Sbjct: 177 DNVHVPRNTPELSAPVKCDLTECELFPFQRRAVRWLLNREGKELNSNGQVVPLENRSKIG 236
Query: 326 MPMDFLDTYSTLFYNPFSGSL------SLSPDYT-SSYVFGGILADEMGLGKTVELLACI 378
+P F F+ L LS Y + ++ GG+LA+EMGLGKTVE+++ +
Sbjct: 237 LPDSFQQITDADGKVCFASHLYMVVTRDLSGWYNVNEHLKGGVLAEEMGLGKTVEMISLM 296
Query: 379 FAHRKPASDDSIFID 393
+R+ + F +
Sbjct: 297 CLNRRILRPEETFAE 311
>TAIR|locus:2158357 [details] [associations]
symbol:AT5G43530 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR014905
Pfam:PF00176 Pfam:PF00271 Pfam:PF08797 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
SMART:SM00910 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 GO:GO:0009941 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AB016875 KO:K15505 OMA:PCAHRMC
HOGENOM:HOG000029930 ProtClustDB:CLSN2686824 IPI:IPI00529351
RefSeq:NP_199166.1 UniGene:At.55338 ProteinModelPortal:Q9FIY7
SMR:Q9FIY7 PaxDb:Q9FIY7 PRIDE:Q9FIY7 EnsemblPlants:AT5G43530.1
GeneID:834373 KEGG:ath:AT5G43530 GeneFarm:4653 TAIR:At5g43530
InParanoid:Q9FIY7 PhylomeDB:Q9FIY7 Genevestigator:Q9FIY7
GermOnline:AT5G43530 Uniprot:Q9FIY7
Length = 1277
Score = 239 (89.2 bits), Expect = 1.5e-32, Sum P(4) = 1.5e-32
Identities = 52/136 (38%), Positives = 73/136 (53%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
++ RI W+RI LDEA ++S A + L + RWC+TGTP+Q KL+DLY LL FL
Sbjct: 809 SIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFL 868
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDE----LQLPPQE 707
P+ WW ++I+ PYENGD ++ + +M R +K E L+LPP +
Sbjct: 869 HVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTD 928
Query: 708 ECVSWLTFSPIEEHFY 723
V S E FY
Sbjct: 929 VQVIECEQSEAERDFY 944
Score = 133 (51.9 bits), Expect = 1.5e-32, Sum P(4) = 1.5e-32
Identities = 36/120 (30%), Positives = 56/120 (46%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYS-TLFYNPFSGSLSLS 349
RPYQ++A YWM + EKG P D + +++ N FSG ++
Sbjct: 617 RPYQKQALYWMSESEKG----IDVEKAAETLHPCWEAYRICDERAPSIYLNIFSGEATIQ 672
Query: 350 PDYTSSYVFGGILADEMGLGKTVELLACIFAHR---KPASDDSIFIDTAVQVTDDQKVNL 406
+ GGILAD MGLGKTV +A I A P ++D + D + +++++
Sbjct: 673 FPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHM 732
Score = 121 (47.7 bits), Expect = 1.5e-32, Sum P(4) = 1.5e-32
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 487 ELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMD 546
E+ A + A G TLI+CP +L+QW E+ H++P ++ +Y G + D
Sbjct: 729 EIHMALTTVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTH-------D 781
Query: 547 ISELVGADIVLTTYDVL----KEDLSH 569
+ D+VLTTY VL K+D+++
Sbjct: 782 AKAIASHDVVLTTYGVLTSAYKQDMAN 808
Score = 56 (24.8 bits), Expect = 1.5e-32, Sum P(4) = 1.5e-32
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 770 AKLLNSLLKLRQACCHPQVGSSGLRSLQQSPL 801
A +L LL+LRQ C HP + S S Q + L
Sbjct: 969 ANILELLLRLRQCCNHPFLVMSRADSQQYADL 1000
Score = 50 (22.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 475 VRDGEHICQWCDELIEATDSPVATGATLIVCPAPILAQW 513
+RDG + C +E+ D PV T +C +L W
Sbjct: 1032 LRDGNS--KECPICLESADDPVLTPCAHRMCRECLLTSW 1068
Score = 39 (18.8 bits), Expect = 8.3e-31, Sum P(4) = 8.3e-31
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 725 SQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIIT 765
SQ+ Y EVIQ L+D K S+D +P++T
Sbjct: 1016 SQNAPSRAYIEEVIQDLRDGNSKECPICLESAD---DPVLT 1053
>UNIPROTKB|G4N1L6 [details] [associations]
symbol:MGG_07487 "ATP-dependent DNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 GO:GO:0005524
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K15710
RefSeq:XP_003711395.1 ProteinModelPortal:G4N1L6
EnsemblFungi:MGG_07487T0 GeneID:2683407 KEGG:mgr:MGG_07487
Uniprot:G4N1L6
Length = 1514
Score = 338 (124.0 bits), Expect = 1.5e-32, Sum P(3) = 1.5e-32
Identities = 86/234 (36%), Positives = 123/234 (52%)
Query: 498 TGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMD-------ISEL 550
TGATLI+ P + AQW AE+ RH P SL IY+G + S ++ +D + +
Sbjct: 369 TGATLIITPTTLRAQWVAELKRHA-P-SLSVMIYQGMKQSCVNRKKSIDAQSESAMLEKF 426
Query: 551 VGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMV 610
+ D+V+ TY L+ ++ S + RR R R P+ P L + WWR+CLDEAQ V
Sbjct: 427 MSHDVVIMTYHELRAEIHFASPPPDRSRRRERKYTR-PLSP--LVQCLWWRVCLDEAQEV 483
Query: 611 ESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPY 670
+S + A +A + + W ITGTPI+ + DL GLL FL PF+ S W E++R
Sbjct: 484 DSGVSKAAILARTIPRVNAWAITGTPIKDDIMDLKGLLMFLHCEPFTHSSIWGELVR--- 540
Query: 671 ENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQ 724
D H F + R SK V DEL LP Q+ V + F+ +E+ +YQ
Sbjct: 541 RKSDF------HAIFNTLALRHSKQLVRDELDLPLQKRYVINIPFNAVEDQYYQ 588
Score = 117 (46.2 bits), Expect = 1.5e-32, Sum P(3) = 1.5e-32
Identities = 36/129 (27%), Positives = 55/129 (42%)
Query: 266 FYEAIKRSKAEPMXXXXXXXXXXXXRPYQRRAAYWMVQRE--KGDXXXXXXXXXXXXXXP 323
FY+A +K E + P+QRRA W++ RE + + P
Sbjct: 224 FYKAAHSTKPE-IFNMSIQGLKAVLYPFQRRAVRWLLGREGVRWEAGSAAWATVASYEAP 282
Query: 324 LCMPMDFL---DTYSTLFY-----NPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELL 375
+P F D + FY + + + P Y + GGIL++EMGLGKT+E++
Sbjct: 283 RQVPPGFTELRDMHGNSFYASDLLDVATRDIDSIP-YRVDAIKGGILSEEMGLGKTLEMI 341
Query: 376 ACIFAHRKP 384
I H P
Sbjct: 342 GLILLHSAP 350
Score = 108 (43.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 50/195 (25%), Positives = 89/195 (45%)
Query: 682 HKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQSQHETCVGYAREVIQRL 741
H F + R SK V DEL LP Q+ V + F+ +E+ +YQ + +RL
Sbjct: 546 HAIFNTLALRHSKQLVRDELDLPLQKRYVINIPFNAVEDQYYQ-----------RLFRRL 594
Query: 742 KDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPL 801
N N G D ++P A + N L LR+A HP VG+ G + L ++PL
Sbjct: 595 VKNC-DLNEQGEPMVDD-WDP---KDYTAVMRNCLDTLRKAALHPHVGA-GNQVLPRNPL 648
Query: 802 SMDEILMVLIGKTKIEGEEAL--RKLVMALNGLAGIALIEKN--LSQAVSLYKEAMAVVE 857
+M ++ +E +L ++ + +N + L+E + +A+ ++++ + E
Sbjct: 649 ---RTVMQVLDHMLLEAGSSLITKQRALLVNKITQGQLLENSPRKKEALEIWQQVLKETE 705
Query: 858 EHSEDFRLDPLLNIH 872
++ R + LN H
Sbjct: 706 PLVKNVRQE--LNEH 718
Score = 46 (21.3 bits), Expect = 1.5e-32, Sum P(3) = 1.5e-32
Identities = 31/130 (23%), Positives = 60/130 (46%)
Query: 822 LRKLVMALNGL---AGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLDPLLNIHLHHNLT 878
LR ++ L+ + AG +LI K +A+ + K + E+S R L I L
Sbjct: 648 LRTVMQVLDHMLLEAGSSLITKQ--RALLVNKITQGQLLENSP--RKKEALEIW-QQVLK 702
Query: 879 EILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDP 938
E P+V N EL++++++ ++ K+ + A+ ++ S ++ +D+
Sbjct: 703 ETEPLVKNVRQELNEHQKYVEKERKERQKLEKLV----KAKAAEK-SDSDSDSHSDSSSS 757
Query: 939 SGHLSDLSEN 948
S S LSE+
Sbjct: 758 SA-ASSLSES 766
Score = 41 (19.5 bits), Expect = 5.0e-32, Sum P(3) = 5.0e-32
Identities = 14/64 (21%), Positives = 24/64 (37%)
Query: 886 NCATELSQNEQHFPGCSE--KAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLS 943
+C E + + P C + +++H + + + E D T E SGH
Sbjct: 1182 DCLLEWLKRAPNCPTCKRGVQRYQLHPFVLKTRDLKLVEN-DGENGDDSTPTEANSGHQP 1240
Query: 944 DLSE 947
SE
Sbjct: 1241 TRSE 1244
>FB|FBgn0035689 [details] [associations]
symbol:CG7376 species:7227 "Drosophila melanogaster"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00176 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0005524 GO:GO:0022008 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 EMBL:BT001896
ProteinModelPortal:Q8IG89 PaxDb:Q8IG89 PRIDE:Q8IG89
FlyBase:FBgn0035689 InParanoid:Q8IG89 OrthoDB:EOG470RZ4
ArrayExpress:Q8IG89 Bgee:Q8IG89 Uniprot:Q8IG89
Length = 1285
Score = 366 (133.9 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 117/363 (32%), Positives = 181/363 (49%)
Query: 445 CVGYSPRGKKRRSTFELKKHTRKKDMTNIVVRDGEHICQWC-DELIEATDSPVATGATLI 503
C+ GK+ + T + ++ + MT + H+C C EL+++ + V +GAT+I
Sbjct: 296 CICTKKHGKRVQCT-KCRRWQHEMCMTISDTSNVPHLCPSCWSELVKSGERLVESGATII 354
Query: 504 VCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTYDVL 563
V P I QW EI +H P SLK +Y G ++ S D+++ D+VLT Y +L
Sbjct: 355 VSPNAIKMQWFEEIHKHISP-SLKVLLYFGLHSTFW--VSPFDLAQY---DVVLTDYTIL 408
Query: 564 KEDLSHDSDRHEGDRRFMRFQKRY--PVIPTLLTRIFWWRICLDEAQMVESNAAAATEMA 621
+ ++ H +D + DR+ MR Q+RY P P L+ WWR+CLDEAQMVES+ +AA EM
Sbjct: 409 RNEIYHTTD-FKSDRQ-MRHQQRYMRPNSPLLMVN--WWRVCLDEAQMVESSTSAAAEMV 464
Query: 622 LRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDP--YENGDVGAME 679
L A +RW +TGT +D+L LL F+ P EV R P ++ D A +
Sbjct: 465 RMLPAINRWAVTGT-----IDELPPLLEFV-GRP--------EVCRPPDAWQTVDK-AFQ 509
Query: 680 FTHK------FFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQSQHETC-VG 732
+K + + R+ K V EL +PPQ E V L S +E +Y+ +H C
Sbjct: 510 LNYKCEPLLELLEHSLWRTCKSKVEHELGIPPQTEVVHRLELSNVESLYYREEHLKCHEQ 569
Query: 733 YAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCHPQVGSSG 792
+ V + + N ++S A +P + +L L++RQ C P V +S
Sbjct: 570 FLAAVAKHTRHNA------DNSSCLASISPQLLRI----ILKPFLRIRQTCSVPVVFNSN 619
Query: 793 LRS 795
+ S
Sbjct: 620 VSS 622
Score = 164 (62.8 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 53/191 (27%), Positives = 88/191 (46%)
Query: 691 RSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQSQHETC-VGYAREVIQRLKDNILKRN 749
R+ K V EL +PPQ E V L S +E +Y+ +H C + V + + N
Sbjct: 527 RTCKSKVEHELGIPPQTEVVHRLELSNVESLYYREEHLKCHEQFLAAVAKHTRHNA---- 582
Query: 750 VPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMV 809
++S A +P + +L L++RQ C P V +S + S L ++L
Sbjct: 583 --DNSSCLASISPQLLRI----ILKPFLRIRQTCSVPVVFNSNVSSTDY--LHPQDLLAR 634
Query: 810 LIGKTKIEGEEALRKLVMALNGLAGIALIEKNLSQAVSLYKEAMAVVEEHSE-DFRLDPL 868
L + E + LR + NGLA I I+ + QA+ Y + + E++E + +D +
Sbjct: 635 LKSNNENECKTELRTWASSYNGLAAIYFIKNDFPQAIKYYNLLLKLANEYNEQNISVDSV 694
Query: 869 LNIHLHHNLTE 879
L IH +NL +
Sbjct: 695 LQIHAIYNLLQ 705
Score = 161 (61.7 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 71/246 (28%), Positives = 104/246 (42%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
R YQ+R WM+ RE+ + F Y FY PF + P
Sbjct: 176 RKYQQRTVSWMLGREQQITQVPANFIVLHAIDGITRV--FKHKYCLQFY-PFEEEI---P 229
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAHRKPASD--DSIFIDTAVQVTDDQKVNLRR 408
S GGILADEMGLGKTVE LA + + +P + + + +D+ + R
Sbjct: 230 KI--SLPPGGILADEMGLGKTVEFLAMLLMNPRPQDSYRNDYWHQRLEEFSDEVPLKRSR 287
Query: 409 L-KRERVECICGAVSESRKYKGLWVQCDICDAWQHADCVGYSPRGKKRR---STF-ELKK 463
+ K++ V CIC ++K+ G VQC C WQH C+ S S + EL K
Sbjct: 288 ISKKDEVFCIC-----TKKH-GKRVQCTKCRRWQHEMCMTISDTSNVPHLCPSCWSELVK 341
Query: 464 HTRK--KDMTNIVVRDGEHICQWCDELIEATDSPVAT----G--ATLIVCPAPILAQWDA 515
+ + I+V QW +E+ + + G +T V P LAQ+D
Sbjct: 342 SGERLVESGATIIVSPNAIKMQWFEEIHKHISPSLKVLLYFGLHSTFWVSPFD-LAQYDV 400
Query: 516 EITRHT 521
+T +T
Sbjct: 401 VLTDYT 406
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 19/86 (22%), Positives = 35/86 (40%)
Query: 560 YDVLKEDLSHDSDRHEGDRRFMRFQKRYPV-IPTLLTRIFWWRICLDEA-QMVESNAAA- 616
YD L E H H R + KR+ + R W + ++ V +N
Sbjct: 146 YDALYE--KHRQTVHVELERSLDLPKRFQSQLRKYQQRTVSWMLGREQQITQVPANFIVL 203
Query: 617 -ATEMALRLYAKHRWCITGTPIQRKL 641
A + R++ KH++C+ P + ++
Sbjct: 204 HAIDGITRVF-KHKYCLQFYPFEEEI 228
>MGI|MGI:1196437 [details] [associations]
symbol:Hltf "helicase-like transcription factor"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 UniPathway:UPA00143 MGI:MGI:1196437
Prosite:PS00518 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0016874 GO:GO:0008270 GO:GO:0006357
GO:GO:0006351 GO:GO:0016568 GO:GO:0016887 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:6596 HOVERGEN:HBG079192 KO:K15711 OMA:SNWIDQF
EMBL:AF010138 EMBL:AF010600 EMBL:BC039796 EMBL:BC057116
EMBL:BC059240 IPI:IPI00315178 RefSeq:NP_033236.2 RefSeq:NP_659208.2
UniGene:Mm.209650 ProteinModelPortal:Q6PCN7 SMR:Q6PCN7
STRING:Q6PCN7 PhosphoSite:Q6PCN7 PRIDE:Q6PCN7
Ensembl:ENSMUST00000002502 GeneID:20585 KEGG:mmu:20585
UCSC:uc008osk.1 GeneTree:ENSGT00700000104586 HOGENOM:HOG000172619
InParanoid:Q6PCN7 OrthoDB:EOG47SSD6 NextBio:298877 Bgee:Q6PCN7
CleanEx:MM_HLTF Genevestigator:Q6PCN7 GermOnline:ENSMUSG00000002428
Uniprot:Q6PCN7
Length = 1003
Score = 234 (87.4 bits), Expect = 1.3e-28, Sum P(5) = 1.3e-28
Identities = 51/135 (37%), Positives = 68/135 (50%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W R+ LDE + + A T+ L L A+ RW +TGTPIQ L DL+ LL FLK
Sbjct: 540 LHSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLSFLKL 599
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCR---SSKVHVSDELQLPPQEECV 710
PF WW +I+ P GD G + K I R +SK+ L+LP ++ +
Sbjct: 600 KPFIDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFI 659
Query: 711 SWLTFSPIEEHFYQS 725
+T S E YQS
Sbjct: 660 QHITLSEEERKIYQS 674
Score = 104 (41.7 bits), Expect = 1.3e-28, Sum P(5) = 1.3e-28
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 487 ELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPG-SLKTCIYEGARNSSLSDTSIM 545
E EA D+ T ATLI+CP +L+ W + +H + L +Y G I
Sbjct: 458 ECSEACDTGERTRATLIICPLSVLSNWIDQFGQHVKSEVHLNFYVYYGPDR-------IR 510
Query: 546 DISELVGADIVLTTYDVLKEDLSHDSD 572
D + L DI+LTTY++L D D
Sbjct: 511 DSAWLSKQDIILTTYNILTHDYGTKDD 537
Score = 82 (33.9 bits), Expect = 1.3e-28, Sum P(5) = 1.3e-28
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 330 FLDTYSTLFYNPFSG-SLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFAH 381
F + + L+YN + S+ P+ V GGILAD+MGLGKT+ +A I +
Sbjct: 263 FWEQRNDLYYNTITNFSVKERPEN----VHGGILADDMGLGKTLTAIAVILTN 311
Score = 81 (33.6 bits), Expect = 1.3e-28, Sum P(5) = 1.3e-28
Identities = 28/92 (30%), Positives = 43/92 (46%)
Query: 726 QHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCH 785
QH T R++ Q +K+ G A+ + A A +L LL+LRQ CCH
Sbjct: 660 QHITLSEEERKIYQSVKNE-------GKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCH 712
Query: 786 PQVGSSGLRSLQQSPLSM-DEILMVLIGKTKI 816
+ ++G+ S S +E+ +LI K KI
Sbjct: 713 THLLTNGMSSSGPSRSDTPEELRKMLIEKMKI 744
Score = 55 (24.4 bits), Expect = 1.1e-23, Sum P(5) = 1.1e-23
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 449 SPRGKKRRSTFELKKHTRKKDMTNIVVR-DGEHICQWCDELIEATDSPVATGATLI---- 503
S RGKK E K T K+ +N+ + DG C E + +P + TL
Sbjct: 320 SKRGKKNHPGKEYKDETIKRRGSNMDKKEDGHSESSTCGEEPSISGTPEKSSCTLSQLSS 379
Query: 504 VCP 506
VCP
Sbjct: 380 VCP 382
Score = 46 (21.3 bits), Expect = 1.3e-28, Sum P(5) = 1.3e-28
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 292 PYQRRAAYWMVQRE 305
P+Q++A WM+ RE
Sbjct: 242 PHQKQALAWMIARE 255
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 689 MCRSSKVHVSDELQLPPQE 707
+CR+ ++H + L+ PP+E
Sbjct: 793 LCRN-EIHGDNLLECPPEE 810
Score = 38 (18.4 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 518 TRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTYDVLKEDLSHDSDR 573
T T SL+ G S S + + + + D + T +D L EDL D DR
Sbjct: 174 TPKTLGSSLENAWGSGRAGPSYSRPAHVAVQ--MTTDQLKTEFDKLFEDLKED-DR 226
>TAIR|locus:2162504 [details] [associations]
symbol:RAD5 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IMP;IDA] [GO:0045003 "double-strand break
repair via synthesis-dependent strand annealing" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0009294 "DNA mediated transformation" evidence=IMP]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS00690 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 EMBL:AB006699 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0009294 GO:GO:0045003 KO:K15505 EMBL:AK228695 IPI:IPI00523984
RefSeq:NP_197667.1 UniGene:At.31042 ProteinModelPortal:Q9FNI6
SMR:Q9FNI6 STRING:Q9FNI6 PaxDb:Q9FNI6 PRIDE:Q9FNI6
EnsemblPlants:AT5G22750.1 GeneID:832338 KEGG:ath:AT5G22750
GeneFarm:4640 TAIR:At5g22750 HOGENOM:HOG000029930 InParanoid:Q9FNI6
OMA:KPIMLRR PhylomeDB:Q9FNI6 ProtClustDB:CLSN2686824
Genevestigator:Q9FNI6 GermOnline:AT5G22750 Uniprot:Q9FNI6
Length = 1029
Score = 260 (96.6 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 72/212 (33%), Positives = 103/212 (48%)
Query: 524 GSLKTCIYEGARNSSLS------DTSIMDISELVGADIVLTTYDVLKEDLSHDSDRHEGD 577
G KT I A+ SLS + D L +D+V+TTY VL + S ++ D
Sbjct: 502 GQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVVITTYGVLTSEFSQENS---AD 558
Query: 578 RRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPI 637
+ Y V R W+RI LDEA ++++ + + A L A RWC+TGTPI
Sbjct: 559 HEGI-----YAV------R--WFRIVLDEAHTIKNSKSQISLAAAALVADRRWCLTGTPI 605
Query: 638 QRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHV 697
Q L+DLY LLRFL+ P+ WW ++++ P+E GD ++ K IM R +K
Sbjct: 606 QNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKSST 665
Query: 698 SDE----LQLPPQEECVSWLTFSPIEEHFYQS 725
E L LPP + V + S E FY +
Sbjct: 666 DREGRPILVLPPADARVIYCELSESERDFYDA 697
Score = 140 (54.3 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 486 DELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIM 545
D+ + S + G LIVCP +L QW EI H +PGSL ++ G S D ++
Sbjct: 477 DKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYG--QSRPKDAKLL 534
Query: 546 DISELVGADIVLTTYDVLKEDLSHDSDR-HEG 576
S D+V+TTY VL + S ++ HEG
Sbjct: 535 SQS-----DVVITTYGVLTSEFSQENSADHEG 561
Score = 137 (53.3 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 36/98 (36%), Positives = 48/98 (48%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFY-NPFSGSLSLS 349
RPYQ++A +WM Q EKG+ C+ D + Y N F+G ++
Sbjct: 349 RPYQKQALHWMTQLEKGNCTDEAATMLHPCWEAYCLA----DKRELVVYLNSFTGDATIH 404
Query: 350 PDYTSSYVFGGILADEMGLGKTVELLACIFAHR-KPAS 386
T GGILAD MGLGKTV ++ + AH K AS
Sbjct: 405 FPSTLQMARGGILADAMGLGKTVMTISLLLAHSWKAAS 442
Score = 53 (23.7 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 770 AKLLNSLLKLRQACCHP 786
A +L LL+LRQ C HP
Sbjct: 720 ASILELLLRLRQCCDHP 736
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 475 VRDGEH-ICQWCDELIEATDSPVATGATLIVCPAPILAQW 513
+R GE C C +EA + V T +C +LA W
Sbjct: 786 LRKGEQGECPIC---LEALEDAVLTPCAHRLCRECLLASW 822
>RGD|1309031 [details] [associations]
symbol:Hltf "helicase-like transcription factor" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 RGD:1309031 Prosite:PS00518
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 IPI:IPI00372747
Ensembl:ENSRNOT00000000095 UCSC:RGD:1309031 ArrayExpress:F1LT77
Uniprot:F1LT77
Length = 1004
Score = 234 (87.4 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 51/135 (37%), Positives = 69/135 (51%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W R+ LDE + + A T+ L L A+ RW +TGTPIQ L DL+ LL FLK
Sbjct: 541 LHSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLSFLKL 600
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCR---SSKVHVSDELQLPPQEECV 710
PF+ WW +I+ P GD G + K I R +SK+ L+LP ++ +
Sbjct: 601 KPFTDREWWHRIIQRPVTTGDEGGLRRLQSLIKSITLRRTKTSKIKGKPVLELPERKVFI 660
Query: 711 SWLTFSPIEEHFYQS 725
+T S E YQS
Sbjct: 661 QHITLSVEERKIYQS 675
Score = 93 (37.8 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 493 DSPVATGATLIVCPAPILAQWDAEITRHTRPG-SLKTCIYEGARNSSLSDTSIMDISELV 551
D+ T TLI+CP +L+ W +I +H + L +Y G I D + L
Sbjct: 465 DTGERTRTTLIICPLSVLSNWIDQIGQHIKSEVDLNLYVYYGPDR-------IRDSTWLS 517
Query: 552 GADIVLTTYDVLKED 566
DI+LTTY++L D
Sbjct: 518 KQDIILTTYNILTHD 532
Score = 82 (33.9 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 330 FLDTYSTLFYNPFSG-SLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFAH 381
F + + L+YN + S+ P+ V GGILAD+MGLGKT+ +A I +
Sbjct: 262 FWELRNDLYYNTITNFSVKERPEN----VHGGILADDMGLGKTLTAIAVILTN 310
Score = 82 (33.9 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 41/169 (24%), Positives = 71/169 (42%)
Query: 726 QHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCH 785
QH T R++ Q +K+ G A+ + A A +L LL+LRQ CCH
Sbjct: 661 QHITLSVEERKIYQSVKNE-------GKATIARYFTEGTVLAHYADVLGLLLRLRQICCH 713
Query: 786 PQVGSSGLRSLQQSPLSM-DEILMVLIGKTK-IEGEEALRKLVMALNGLAGIALIEKNLS 843
+ ++G S S +E+ +L+ K K I + + + L+ L +I +
Sbjct: 714 VHLPTNGTSSSDPSRSDTPEELRKMLVTKMKLILSSGSDEECSICLDSLT-FPVI----T 768
Query: 844 QAVSLY-KEAMAVVEEHSEDFRLDPLLNIHLH-HNLTEILPMVANCATE 890
++ K + V + + PL ++H HNL E P C ++
Sbjct: 769 HCAHVFCKPCICQVIQREQPHAKCPLCRSNIHGHNLLECPPEELACDSD 817
Score = 46 (21.3 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 292 PYQRRAAYWMVQRE 305
P+Q++A WM+ RE
Sbjct: 241 PHQKQALAWMIARE 254
>UNIPROTKB|E2R9I5 [details] [associations]
symbol:HLTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
SMART:SM00910 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006357
GO:GO:0016887 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CTD:6596 KO:K15711 OMA:SNWIDQF GeneTree:ENSGT00700000104586
EMBL:AAEX03013671 RefSeq:XP_534300.3 Ensembl:ENSCAFT00000013176
GeneID:477106 KEGG:cfa:477106 Uniprot:E2R9I5
Length = 1007
Score = 225 (84.3 bits), Expect = 2.6e-27, Sum P(5) = 2.6e-27
Identities = 51/135 (37%), Positives = 67/135 (49%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W R+ LDE + + A T+ L L A+ RW +TGTPIQ L DL+ LL FLK
Sbjct: 544 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKL 603
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCR---SSKVHVSDELQLPPQEECV 710
PF WW I+ P GD G + K I R +SK+ L+LP ++ +
Sbjct: 604 KPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFI 663
Query: 711 SWLTFSPIEEHFYQS 725
+T S E YQS
Sbjct: 664 QHITLSDEERKIYQS 678
Score = 90 (36.7 bits), Expect = 2.6e-27, Sum P(5) = 2.6e-27
Identities = 47/178 (26%), Positives = 74/178 (41%)
Query: 726 QHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCH 785
QH T R++ Q +K+ G A+ +N A A +L LL+LRQ CCH
Sbjct: 664 QHITLSDEERKIYQSVKNE-------GRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 716
Query: 786 PQV----GSSGLRSLQQSPLSMDEILMVLIGKTK-IEGEEALRKLVMALNGLAGIALIEK 840
+ GSS S +P +E+ LI K K I + + + L+ L + +I
Sbjct: 717 THLLTNAGSSSGPSGNDTP---EELRKKLIRKMKLILSSGSDEECAICLDSLT-VPVI-- 770
Query: 841 NLSQAVSLY-KEAMAVVEEHSEDFRLDPLLNIHLH-HNLTEILPMVANCATELSQNEQ 896
+ ++ K + V ++ + PL +H NL E P C TE N +
Sbjct: 771 --THCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELACDTEKKSNTE 826
Score = 88 (36.0 bits), Expect = 2.6e-27, Sum P(5) = 2.6e-27
Identities = 28/92 (30%), Positives = 40/92 (43%)
Query: 492 TDSPVATGATLIVCPAPILAQWDAEITRHTRPG-SLKTCIYEGARNSSLSDTSIMDISEL 550
TD TLI+CP +L+ W + +H + L +Y G I D + L
Sbjct: 467 TDIEDRPRTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDR-------IRDPALL 519
Query: 551 VGADIVLTTYDVLKEDLSHDSDRHEGDRRFMR 582
DIVLTTY++L D D R++R
Sbjct: 520 SKQDIVLTTYNILTHDYGTKGDSPLHSIRWLR 551
Score = 84 (34.6 bits), Expect = 2.6e-27, Sum P(5) = 2.6e-27
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 330 FLDTYSTLFYNPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLACI---FAHRKPAS 386
F + + L+YN + + S V GGILAD+MGLGKT+ +A I F KP
Sbjct: 263 FWEQRNDLYYNTIT---NFSEKDRPENVHGGILADDMGLGKTLTAIAVILTNFHDGKPLP 319
Query: 387 DDSIFIDTAVQVTDDQKVNLRRLKRERVECICGAVSESRKYKGLWVQCDICDAWQHADCV 446
+ I + Q+ + VN + +K G + S K GL ++ C V
Sbjct: 320 VERIKKN---QMKKECNVNDQSMK-------LGGNNASEKADGL-IKGSRCSGEPSISDV 368
Query: 447 GYSPRGKKRRSTFELKKHTRKKDMTNI 473
+GKK+ + EL K+ T +
Sbjct: 369 ----KGKKKYTKSELSSSRPKRRKTAV 391
Score = 48 (22.0 bits), Expect = 2.6e-27, Sum P(5) = 2.6e-27
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 292 PYQRRAAYWMVQRE 305
P+Q++A WMV RE
Sbjct: 242 PHQKQALAWMVSRE 255
Score = 44 (20.5 bits), Expect = 4.3e-18, Sum P(3) = 4.3e-18
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 558 TTYDVLKEDLSHDSDRHE 575
T +D L EDL D HE
Sbjct: 212 TEFDKLFEDLKEDDKTHE 229
>UNIPROTKB|I3LM88 [details] [associations]
symbol:HLTF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016887 "ATPase activity" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OMA:SNWIDQF GeneTree:ENSGT00700000104586
EMBL:CU915669 EMBL:FP476099 Ensembl:ENSSSCT00000023239
Uniprot:I3LM88
Length = 1011
Score = 225 (84.3 bits), Expect = 4.3e-27, Sum P(5) = 4.3e-27
Identities = 51/135 (37%), Positives = 67/135 (49%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W R+ LDE + + A T+ L L A+ RW +TGTPIQ L DL+ LL FLK
Sbjct: 548 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKL 607
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCR---SSKVHVSDELQLPPQEECV 710
PF WW I+ P GD G + K I R +SK+ L+LP ++ +
Sbjct: 608 KPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFI 667
Query: 711 SWLTFSPIEEHFYQS 725
+T S E YQS
Sbjct: 668 QHITLSDEERKIYQS 682
Score = 88 (36.0 bits), Expect = 4.3e-27, Sum P(5) = 4.3e-27
Identities = 27/92 (29%), Positives = 40/92 (43%)
Query: 492 TDSPVATGATLIVCPAPILAQWDAEITRHTRPG-SLKTCIYEGARNSSLSDTSIMDISEL 550
TD TLI+CP +L+ W + +H + L +Y G + D + L
Sbjct: 471 TDVEERPRTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDR-------VRDPALL 523
Query: 551 VGADIVLTTYDVLKEDLSHDSDRHEGDRRFMR 582
DIVLTTY++L D D R++R
Sbjct: 524 SKQDIVLTTYNILTHDYGTKGDSPLHSIRWLR 555
Score = 88 (36.0 bits), Expect = 4.3e-27, Sum P(5) = 4.3e-27
Identities = 44/173 (25%), Positives = 73/173 (42%)
Query: 726 QHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCH 785
QH T R++ Q +K++ G A+ +N A A +L LL+LRQ CCH
Sbjct: 668 QHITLSDEERKIYQSVKND-------GRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 720
Query: 786 PQVGSSGLRSLQQSPLSM-DEILMVLIGKTK-IEGEEALRKLVMALNGLAGIALIEKNLS 843
+ ++ + S S +E+ LI K K I + + + L+ L + +I +
Sbjct: 721 THLLTNAVSSSGPSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSLT-VPVI----T 775
Query: 844 QAVSLY-KEAMAVVEEHSEDFRLDPLLNIHLH-HNLTEILPMVANCATELSQN 894
++ K + V ++ + PL +H NL E P C TE N
Sbjct: 776 HCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELACDTEKKSN 828
Score = 84 (34.6 bits), Expect = 4.3e-27, Sum P(5) = 4.3e-27
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 330 FLDTYSTLFYNPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFAH 381
F + S L+YN + + S V GGILAD+MGLGKT+ +A I +
Sbjct: 263 FWEQRSDLYYNTIT---NFSEKDRPENVHGGILADDMGLGKTLTAIAVILTN 311
Score = 48 (22.0 bits), Expect = 4.3e-27, Sum P(5) = 4.3e-27
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 292 PYQRRAAYWMVQRE 305
P+Q++A WMV RE
Sbjct: 242 PHQKQALAWMVSRE 255
Score = 44 (20.5 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 558 TTYDVLKEDLSHDSDRHE 575
T +D L EDL D HE
Sbjct: 212 TEFDKLFEDLKEDDKTHE 229
>UNIPROTKB|F1MLM2 [details] [associations]
symbol:HLTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016887 "ATPase activity" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006357 GO:GO:0016887 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OMA:SNWIDQF GeneTree:ENSGT00700000104586
EMBL:DAAA02002705 EMBL:DAAA02002706 IPI:IPI00883352
Ensembl:ENSBTAT00000034508 Uniprot:F1MLM2
Length = 1009
Score = 219 (82.2 bits), Expect = 4.8e-26, Sum P(5) = 4.8e-26
Identities = 50/135 (37%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W R+ LDE + + A T+ L L A+ RW +TGTPIQ L DL+ LL FLK
Sbjct: 546 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKL 605
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCR---SSKVHVSDELQLPPQEECV 710
PF WW I+ P GD + K I R +SK+ L+LP ++ +
Sbjct: 606 KPFVDREWWHRTIQRPVTMGDEAGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFI 665
Query: 711 SWLTFSPIEEHFYQS 725
+T S E YQS
Sbjct: 666 QHITLSDEERKIYQS 680
Score = 88 (36.0 bits), Expect = 4.8e-26, Sum P(5) = 4.8e-26
Identities = 28/97 (28%), Positives = 42/97 (43%)
Query: 487 ELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPG-SLKTCIYEGARNSSLSDTSIM 545
E + TD TLI+CP +L+ W + +H + L +Y G +
Sbjct: 464 ESSKKTDVEDKPRTTLIICPLSVLSNWMDQFGQHIKSDVHLNFYVYYGPDR-------VR 516
Query: 546 DISELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMR 582
D + L DIVLTTY++L D D R++R
Sbjct: 517 DPTLLSKQDIVLTTYNILTHDYGTKGDSPLHSIRWLR 553
Score = 84 (34.6 bits), Expect = 4.8e-26, Sum P(5) = 4.8e-26
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 330 FLDTYSTLFYNPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFAH 381
F + S L+YN + + S V GGILAD+MGLGKT+ +A I +
Sbjct: 263 FWEQRSDLYYNTIT---NFSEKDRPENVHGGILADDMGLGKTLTAIAVILTN 311
Score = 81 (33.6 bits), Expect = 4.8e-26, Sum P(5) = 4.8e-26
Identities = 43/172 (25%), Positives = 71/172 (41%)
Query: 726 QHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCH 785
QH T R++ Q +K+ G A+ +N A A +L LL+LRQ CCH
Sbjct: 666 QHITLSDEERKIYQSVKNE-------GKATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718
Query: 786 PQVGSSGLRSLQQSPLSM-DEILMVLIGKTK-IEGEEALRKLVMALNGLAGIALIEKNLS 843
+ ++ + S S +E+ LI K K I + + + L+ L +A + + +
Sbjct: 719 THLLANAVSSSGPSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSL--MAPVITHCA 776
Query: 844 QAVSLYKEAMAVVEEHSEDFRLDPLLNIHLH-HNLTEILPMVANCATELSQN 894
K + V ++ + PL +H +L E P C TE N
Sbjct: 777 HVFC--KPCICQVIQNEQPHAKCPLCRNDIHGDSLIECPPEELACNTEKKSN 826
Score = 70 (29.7 bits), Expect = 1.2e-24, Sum P(5) = 1.2e-24
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 357 VFGGILADEMGLGKTVELLACIFAHRKPASDDSIFIDTAVQVTDDQKVNLRRLKRERVEC 416
V GGILAD+MGLGKT+ +A I + D + + + R+K+ +++
Sbjct: 287 VHGGILADDMGLGKTLTAIAVILTN----------------FHDGKSLPVERIKKNQLKK 330
Query: 417 ICGAVSESRKYKG 429
C ES + G
Sbjct: 331 ECNVYDESMELGG 343
Score = 51 (23.0 bits), Expect = 4.8e-26, Sum P(5) = 4.8e-26
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 252 VSASQKHASFDVARFYEAIKRS-KAEPMXXXXXXXXXXXXRPYQRRAAYWMVQREKGD 308
++ Q FD + +E +K K + M P+Q++A WMV RE +
Sbjct: 205 MTTEQLKTEFD--KLFEDLKEDDKTQEMEPAEAIETPLL--PHQKQALAWMVSRENSE 258
>POMBASE|SPAC13G6.01c [details] [associations]
symbol:rad8 "ubiquitin-protein ligase E3 Rad8"
species:4896 "Schizosaccharomyces pombe" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281
"DNA repair" evidence=IGI;IMP] [GO:0006289 "nucleotide-excision
repair" evidence=IMP] [GO:0006301 "postreplication repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009650 "UV protection" evidence=IMP] [GO:0016567 "protein
ubiquitination" evidence=NAS] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 PomBase:SPAC13G6.01c Prosite:PS00518
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386 GO:GO:0004842
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006289 GO:GO:0006301 GO:GO:0009650 KO:K15505
HOGENOM:HOG000040492 OrthoDB:EOG4J40R2 EMBL:X74615 PIR:S41478
RefSeq:XP_001713034.1 ProteinModelPortal:P36607 STRING:P36607
PRIDE:P36607 EnsemblFungi:SPAC13G6.01c.1 GeneID:3361391
KEGG:spo:SPAC13G6.01c OMA:PCAHRMC NextBio:20811441 Uniprot:P36607
Length = 1133
Score = 188 (71.2 bits), Expect = 5.7e-26, Sum P(4) = 5.7e-26
Identities = 41/138 (29%), Positives = 70/138 (50%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L + W+R+ LDE + + + + + +++RW ITGTPI KLDDLY L++F++
Sbjct: 645 LFSVHWFRVVLDEGHNIRNRESKTAKACHSISSQNRWVITGTPIVNKLDDLYSLIKFMRY 704
Query: 654 SPFSISRWWIEVIRDPYENGDV-GAMEFTHKFFKEIMCRSSKVHVSDE-----LQLPPQE 707
P+ +W + PY++ DV A+ + ++ R +K D + LPP+
Sbjct: 705 EPWCNYTYWQTFVSLPYQSKDVLKALNVVQSILEFLVLRRTK-ETKDRNGNSIVTLPPKT 763
Query: 708 ECVSWLTFSPIEEHFYQS 725
+ +L FS E Y S
Sbjct: 764 VKIEYLDFSDSERKIYDS 781
Score = 143 (55.4 bits), Expect = 5.7e-26, Sum P(4) = 5.7e-26
Identities = 48/154 (31%), Positives = 67/154 (43%)
Query: 248 TKNDVSASQKHASFDVARFYEAIKRSKAEPMXXXXXXXXXXXXRPYQRRAAYWMVQREKG 307
T + + S +A Y+ +K S AE R YQ++A YWM +E+G
Sbjct: 403 TPSSTEDEEDVVSDQLAILYDKVKTSGAELPSAPKPSTFALDLREYQKQALYWMCCKEEG 462
Query: 308 DXXXXXXXXXXXXXXPLCMPMD-----FL----DTYSTLFY-NPFSGSLSLSPDYTSSYV 357
P D F D +T FY N ++G ++ + Y
Sbjct: 463 VQSDGSAPKLHPLWSRFRFPKDSEFPEFFKCSSDDDNTHFYVNLYTGETTMLFPNSMPYH 522
Query: 358 FGGILADEMGLGKTVELLACIFAHRKPA-SDDSI 390
GGILADEMGLGKT+E+L+ I H +P S D I
Sbjct: 523 RGGILADEMGLGKTIEVLSLI--HSRPCFSTDEI 554
Score = 98 (39.6 bits), Expect = 5.7e-26, Sum P(4) = 5.7e-26
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 482 CQWCDELIEA-----TDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARN 536
C DE+ EA PVA+ TL+V P +L QW +E + ++ ++ IY G+
Sbjct: 548 CFSTDEIPEAFRHSKPSLPVASRTTLVVAPMSLLDQWHSEACKVSQGTKFRSMIYYGSEK 607
Query: 537 SSLSDTSIMDISELVGADIVLTTYDVLKEDLSHDS 571
+ ++D S I++T+Y VL + S S
Sbjct: 608 PLDLKSCVIDTS--TAPLIIITSYGVLLSEFSQQS 640
Score = 56 (24.8 bits), Expect = 5.7e-26, Sum P(4) = 5.7e-26
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 772 LLNSLLKLRQACCHP 786
+L LL+LRQACC P
Sbjct: 806 ILGLLLRLRQACCDP 820
>WB|WBGene00010061 [details] [associations]
symbol:F54E12.2 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z73102 EMBL:Z82271
GeneTree:ENSGT00700000104545 KO:K15173 PIR:T18666
RefSeq:NP_502137.1 ProteinModelPortal:G5EEW5 SMR:G5EEW5
IntAct:G5EEW5 EnsemblMetazoa:F54E12.2.1 EnsemblMetazoa:F54E12.2.2
GeneID:178054 KEGG:cel:CELE_F54E12.2 CTD:178054 WormBase:F54E12.2
OMA:QTCAVTN NextBio:899526 Uniprot:G5EEW5
Length = 1091
Score = 297 (109.6 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 95/326 (29%), Positives = 157/326 (48%)
Query: 496 VATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADI 555
+ + TLIV PA ++ QWDAEI R L T ++ G + D +D L D+
Sbjct: 543 IPSNGTLIVAPASLIHQWDAEIDRRLDDSVLSTYMFHGTKKQR--D---IDARRLARYDV 597
Query: 556 VLTTYDVLKEDL---------SHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDE 606
V+TT++++ +L + DS E D ++ ++L +I W R+ LDE
Sbjct: 598 VITTFNLIANELIEKIRTKSKADDSSDGESDSNHTGIRRAVGKDDSVLAQICWSRVILDE 657
Query: 607 AQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVI 666
A +++ + A++ RL A RWC++GTPI L DLY L+RFL+ PFS ++W E I
Sbjct: 658 AHTIKNRQSLASKAVCRLSAFSRWCLSGTPIHNNLWDLYSLVRFLRIRPFSDDKYWKESI 717
Query: 667 RDPYENGDVGAMEFTHKFFKEIMCRSSKVH---VSDE--LQLPPQEECVSWLTFSPIEEH 721
P + + A + + K ++ R +K V+++ +QLPP+ V L E
Sbjct: 718 M-PMK--PIMA-DRVNLLTKNLLLRRTKDQTCAVTNQKLVQLPPKNVEVHELELDGDEAQ 773
Query: 722 FYQSQHETCVGYAREVIQRLKD--N---ILKRN----VPGHASSDALYNP--IITHAEAA 770
Y+ E + ++++Q D N I +RN G + + P + +
Sbjct: 774 AYEIMMEAAKKFVKKLLQDSNDMKNHGFIPRRNRRAGKEGEVQNPFNFGPRDLAAGSNFE 833
Query: 771 KL---LNSLLKLRQACCHPQVGSSGL 793
K+ L LL+LRQAC H + +G+
Sbjct: 834 KMSCVLMLLLRLRQACVHFNITKTGV 859
Score = 84 (34.6 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPA 385
GGILAD+MGLGKT+ +++ I AH+K A
Sbjct: 492 GGILADDMGLGKTLSMISLI-AHQKAA 517
Score = 49 (22.3 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 18/82 (21%), Positives = 32/82 (39%)
Query: 193 KSAFDACESLLENSRKTWKKSMINVMSWLRPEVLTSEARYGVSKSMEMDVELMTRTKNDV 252
K + D +S+++ S K+ ++N S S A L + +
Sbjct: 38 KESDDQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSR 97
Query: 253 SASQKHASFDVARFYEAIKRSK 274
S+SQ H S D +R + +K
Sbjct: 98 SSSQNHESHDRSRSFVQYDENK 119
>ASPGD|ASPL0000056426 [details] [associations]
symbol:AN0044 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009650 "UV
protection" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
SMART:SM00910 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BN001308 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000002 KO:K15505 RefSeq:XP_657648.1
ProteinModelPortal:Q5BHD6 STRING:Q5BHD6
EnsemblFungi:CADANIAT00002711 GeneID:2875817 KEGG:ani:AN0044.2
HOGENOM:HOG000040492 OMA:MDPWWSP OrthoDB:EOG4J40R2 Uniprot:Q5BHD6
Length = 1202
Score = 226 (84.6 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 56/196 (28%), Positives = 99/196 (50%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG-ARNSSLSDTSIMDISELVGADIVLTT 559
TL+V P +LAQW+ E + +R GS+K +Y G +N +L + + +++LT+
Sbjct: 561 TLVVAPMSLLAQWEGEALKASRNGSMKVLMYYGNEKNVNLRE--MCSAGNAAAPNMILTS 618
Query: 560 YDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATE 619
Y V+ + H R P L + ++R+ LDEA ++++ +
Sbjct: 619 YGVVMSE-------H---RTHQALAPGTSWTPGNLFSVDFFRVILDEAHIIKNRRSKTAR 668
Query: 620 MALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGDV-GAM 678
L A HRW +TGTPI +L+DL+ L+RFL+ P++ +W I P+E+ +V A+
Sbjct: 669 ACYDLKATHRWVLTGTPIVNRLEDLFSLVRFLRVEPWNNFSFWKTFITAPFESKEVVRAI 728
Query: 679 EFTHKFFKEIMCRSSK 694
+ ++ R +K
Sbjct: 729 SVVQTVLEPLVLRRTK 744
Score = 155 (59.6 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 46/181 (25%), Positives = 82/181 (45%)
Query: 215 INVMSWLRPEVLTSEARYGVSKSMEM-DVEL--MTRTKNDVSASQKHASFDVARFYEAIK 271
I + S + + + + + G+ ++ EM D E + ++ N S ++ A + + K
Sbjct: 355 IGLKSTTQDDEIKKQRKEGLLRAAEMADQEAKKLAKSGNTDSGDEEPAELEQDQLDALYK 414
Query: 272 RSKAEPMXXXXX---XXXXXXXRPYQRRAAYWMVQREKGDXXXXXXXXX---XXXXXPLC 325
++++ R YQ++A YWM+ +EK PL
Sbjct: 415 KAQSFDFSMPEAQPPSSFAMDLRKYQKQALYWMLSKEKDKKSGREVSIHPLWEEYDWPLK 474
Query: 326 ----MPMDFLDTYSTLFYNPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFAH 381
+ ++ + + NP+SG LSL + GGILADEMGLGKT+E+L+ + +H
Sbjct: 475 DVDDKDLPIIEGINHFYVNPYSGELSLDFPAQEQHCLGGILADEMGLGKTIEMLSLVHSH 534
Query: 382 R 382
R
Sbjct: 535 R 535
Score = 57 (25.1 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 776 LLKLRQACCHP 786
LL+LRQ CCHP
Sbjct: 808 LLRLRQTCCHP 818
Score = 40 (19.1 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 31 KPHGSEQPEKEELADVDHPFFVEV 54
+ H ++ P + L+D D FV +
Sbjct: 82 RTHQAQSPAHDTLSDFDTEAFVSI 105
Score = 38 (18.4 bits), Expect = 2.1e-23, Sum P(4) = 2.1e-23
Identities = 11/48 (22%), Positives = 17/48 (35%)
Query: 696 HVSDELQLPPQEECVSWLTFSPIEEHFYQSQHETCVGYAREVIQRLKD 743
H ++Q EC I+ H C G ++ IQ +D
Sbjct: 879 HALRQIQTESAGECPICSEEPMIDPAVTACWHSACKGCLKDYIQHQRD 926
>ZFIN|ZDB-GENE-030131-3306 [details] [associations]
symbol:hltf "helicase-like transcription factor"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518
ZFIN:ZDB-GENE-030131-3306 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:6596 HOVERGEN:HBG079192 KO:K15711 OMA:SNWIDQF
GeneTree:ENSGT00700000104586 HOGENOM:HOG000172619 OrthoDB:EOG47SSD6
EMBL:CR788256 IPI:IPI00500566 RefSeq:XP_693071.2 UniGene:Dr.105912
Ensembl:ENSDART00000099350 Ensembl:ENSDART00000132050 GeneID:564651
KEGG:dre:564651 NextBio:20885486 Uniprot:B0V118
Length = 942
Score = 213 (80.0 bits), Expect = 3.2e-25, Sum P(4) = 3.2e-25
Identities = 47/134 (35%), Positives = 70/134 (52%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L + W R+ LDE +V + A ++ L L ++ RW ++GTPIQ L DL+ LL FLK
Sbjct: 486 LHNVKWLRVVLDEGHVVRNPNALQSKAVLELQSERRWILSGTPIQNSLKDLFMLLSFLKL 545
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCR---SSKVHVSDELQLPPQEECV 710
PF + WW +I+ P GD ++ K I R +SKV +QLP + V
Sbjct: 546 KPFDVKEWWSRIIQRPVTMGDRVGLKNLQALVKGITLRRTKNSKVGGRTLVQLPERRVFV 605
Query: 711 SWLTFSPIEEHFYQ 724
++T S +E Y+
Sbjct: 606 QYVTLSGMEREKYE 619
Score = 128 (50.1 bits), Expect = 3.2e-25, Sum P(4) = 3.2e-25
Identities = 67/233 (28%), Positives = 107/233 (45%)
Query: 357 VFGGILADEMGLGKTVELLACI---FAHRKPASDDSIFIDTAVQVTDDQKVNLRRLKRER 413
V GGILAD+MGLGKT+ +A I F + KP + + Q + K +
Sbjct: 273 VLGGILADDMGLGKTLTTIALIVSNFHNGKPLPLEKCKGPSMPSAKRKQATS----KEKG 328
Query: 414 VECICGAVSESRKYKGLWVQCDICDAWQHADCVGYSPRGKKRRSTFELKKHTRKKDMTNI 473
V+ ES++ GL + H D V + KK ++T + +T+K +
Sbjct: 329 VDS-----EESQESMGLSPLKRL-----HDDTVRENGPQKKTKTTKKKSANTKK---AVV 375
Query: 474 VVRDGEHICQW-CD--ELI--------EATDSPVATG----ATLIVCPAPILAQWDAEIT 518
++ D E C +++ + S ++ G ATLIVCP +L+ W +
Sbjct: 376 LLDDVEFAAALECSSSQVVPSKKCVKKSSVPSEISAGSVARATLIVCPLSVLSNWLDQFE 435
Query: 519 RHTRPG-SLKTCIYEGA-RNSSLSDTSIMDISELVGADIVLTTYDVLKEDLSH 569
+H R ++K +Y G+ RN S+S +SE D+VLTTY+VL D +
Sbjct: 436 QHIRTDVTVKVYLYYGSERNRSVSL-----LSE---QDVVLTTYNVLSSDFGN 480
Score = 83 (34.3 bits), Expect = 3.2e-25, Sum P(4) = 3.2e-25
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 726 QHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCH 785
Q+ T G RE +R+K +N+ G + + A A +L L++LRQ CCH
Sbjct: 606 QYVTLSGMEREKYERVKGE--GKNIVGRYFQEGTFM-----ANYADVLTILMRLRQCCCH 658
Query: 786 PQ-VGSSGLRSLQQSPLSMDEILM 808
P VG+ + +P + E L+
Sbjct: 659 PSLVGNYTAADVPGTPSELRERLI 682
Score = 48 (22.0 bits), Expect = 3.2e-25, Sum P(4) = 3.2e-25
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 171 RPTLGITFSEDMSSLRVRVEILKSAFDAC-ESLLENSRK 208
R LG+ S +S++ + E LK+AFD + L+E+ K
Sbjct: 178 RDLLGL--STKLSAIPLSAEELKNAFDKLFDDLMEDKTK 214
Score = 38 (18.4 bits), Expect = 3.3e-24, Sum P(4) = 3.3e-24
Identities = 12/57 (21%), Positives = 24/57 (42%)
Query: 252 VSASQKHASFDVARFYEAIKRSKAEPMXXXXXXXXXXXXRPYQRRAAYWMVQREKGD 308
+SA + +FD + ++ + K + M +Q++A WM RE +
Sbjct: 192 LSAEELKNAFD--KLFDDLMEDKTKEMEPAEAVCTPLLS--HQKQALSWMSSRENSN 244
>UNIPROTKB|Q14527 [details] [associations]
symbol:HLTF "Helicase-like transcription factor"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR014905
Pfam:PF00176 Pfam:PF00271 Pfam:PF08797 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SMART:SM00910
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
EMBL:CH471052 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 GO:GO:0016887 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:L34673
EMBL:Z46606 EMBL:AJ418064 EMBL:BC044659 EMBL:S64671 IPI:IPI00339381
IPI:IPI00759790 PIR:S49618 RefSeq:NP_003062.2 RefSeq:NP_620636.1
UniGene:Hs.3068 PDB:2L1I PDBsum:2L1I ProteinModelPortal:Q14527
SMR:Q14527 DIP:DIP-29828N IntAct:Q14527 MINT:MINT-1639589
STRING:Q14527 PhosphoSite:Q14527 DMDM:60390864 PaxDb:Q14527
PRIDE:Q14527 DNASU:6596 Ensembl:ENST00000310053
Ensembl:ENST00000392912 Ensembl:ENST00000465259
Ensembl:ENST00000494055 GeneID:6596 KEGG:hsa:6596 UCSC:uc003ewq.1
CTD:6596 GeneCards:GC03M148747 H-InvDB:HIX0024319 HGNC:HGNC:11099
HPA:HPA015284 MIM:603257 neXtProt:NX_Q14527 PharmGKB:PA35949
HOVERGEN:HBG079192 InParanoid:Q14527 KO:K15711 OMA:SNWIDQF
PhylomeDB:Q14527 GenomeRNAi:6596 NextBio:25655 ArrayExpress:Q14527
Bgee:Q14527 CleanEx:HS_HLTF Genevestigator:Q14527
GermOnline:ENSG00000071794 Uniprot:Q14527
Length = 1009
Score = 222 (83.2 bits), Expect = 9.3e-25, Sum P(5) = 9.3e-25
Identities = 50/135 (37%), Positives = 67/135 (49%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W R+ LDE + + A T+ L L ++ RW +TGTPIQ L DL+ LL FLK
Sbjct: 546 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLLSFLKL 605
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCR---SSKVHVSDELQLPPQEECV 710
PF WW I+ P GD G + K I R +SK+ L+LP ++ +
Sbjct: 606 KPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFI 665
Query: 711 SWLTFSPIEEHFYQS 725
+T S E YQS
Sbjct: 666 QHITLSDEERKIYQS 680
Score = 85 (35.0 bits), Expect = 9.3e-25, Sum P(5) = 9.3e-25
Identities = 27/92 (29%), Positives = 40/92 (43%)
Query: 492 TDSPVATGATLIVCPAPILAQWDAEITRHTRPG-SLKTCIYEGARNSSLSDTSIMDISEL 550
TD TLI+CP +L+ W + +H + L +Y G I + + L
Sbjct: 469 TDVEERPRTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDR-------IREPALL 521
Query: 551 VGADIVLTTYDVLKEDLSHDSDRHEGDRRFMR 582
DIVLTTY++L D D R++R
Sbjct: 522 SKQDIVLTTYNILTHDYGTKGDSPLHSIRWLR 553
Score = 81 (33.6 bits), Expect = 9.3e-25, Sum P(5) = 9.3e-25
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 330 FLDTYSTLFYNPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFAH 381
F + + L+YN + + S V GGILAD+MGLGKT+ +A I +
Sbjct: 263 FWEQRNDLYYNTIT---NFSEKDRPENVHGGILADDMGLGKTLTAIAVILTN 311
Score = 74 (31.1 bits), Expect = 9.3e-25, Sum P(5) = 9.3e-25
Identities = 27/92 (29%), Positives = 42/92 (45%)
Query: 726 QHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCH 785
QH T R++ Q +K+ G A+ +N A A +L LL+LRQ CCH
Sbjct: 666 QHITLSDEERKIYQSVKNE-------GRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718
Query: 786 PQVGSSGLRSLQQSPLSM-DEILMVLIGKTKI 816
+ ++ + S S +E+ LI K K+
Sbjct: 719 TYLLTNAVSSNGPSGNDTPEELRKKLIRKMKL 750
Score = 48 (22.0 bits), Expect = 9.3e-25, Sum P(5) = 9.3e-25
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 292 PYQRRAAYWMVQRE 305
P+Q++A WMV RE
Sbjct: 242 PHQKQALAWMVSRE 255
Score = 44 (20.5 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 558 TTYDVLKEDLSHDSDRHE 575
T +D L EDL D HE
Sbjct: 212 TEFDKLFEDLKEDDKTHE 229
>DICTYBASE|DDB_G0272082 [details] [associations]
symbol:DDB_G0272082 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 dictyBase:DDB_G0272082
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000007 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_001732968.1 EnsemblProtists:DDB0233429 GeneID:8618298
KEGG:ddi:DDB_G0272082 Uniprot:B0G105
Length = 1838
Score = 206 (77.6 bits), Expect = 1.1e-23, Sum P(5) = 1.1e-23
Identities = 46/134 (34%), Positives = 69/134 (51%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W+R+ LDEA ++ + ++ L + RWC+TGTPIQ KLDDL+ LL FL+ PF
Sbjct: 1122 WFRVVLDEAHTIKERSTRTSKATYALESIIRWCVTGTPIQNKLDDLFSLLHFLRVEPFHN 1181
Query: 659 SRWWIEVIRDPYE-NGDVGAMEFTHKFFKEIMCR--SSKVHVSDELQLPPQEECVSWLTF 715
WW + I P + D+G K ++ R K++ + L+LP + + F
Sbjct: 1182 YSWWNQYILKPSKLKDDIGFSRLRVLLSKILLRRLKDQKINNTPILKLPDRTIMIKRDIF 1241
Query: 716 SPIEEHFYQSQHET 729
S EE YQ +T
Sbjct: 1242 SEEEEQIYQDLWKT 1255
Score = 114 (45.2 bits), Expect = 1.1e-23, Sum P(5) = 1.1e-23
Identities = 31/81 (38%), Positives = 41/81 (50%)
Query: 492 TDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELV 551
T+ + TLIVCP +L QW +EI +T P SL IY G + D S L+
Sbjct: 935 TNQVQQSNCTLIVCPVSVLQQWHSEIINNTNP-SLNVYIYHGPNRNR-------DRSFLM 986
Query: 552 GADIVLTTYDVLKEDLSHDSD 572
DI+LTTY L + H+ D
Sbjct: 987 KHDIILTTYTTLVAE--HNDD 1005
Score = 89 (36.4 bits), Expect = 1.1e-23, Sum P(5) = 1.1e-23
Identities = 15/28 (53%), Positives = 24/28 (85%)
Query: 355 SYVFGGILADEMGLGKTVELLACIFAHR 382
S+V GG+L D+MG+GKT+E++A I A++
Sbjct: 880 SFVKGGLLCDDMGMGKTIEIIATILANK 907
Score = 55 (24.4 bits), Expect = 1.1e-23, Sum P(5) = 1.1e-23
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 291 RPYQRRAAYWMVQRE 305
R YQR+A YWM RE
Sbjct: 846 RTYQRQALYWMHHRE 860
Score = 52 (23.4 bits), Expect = 1.1e-23, Sum P(5) = 1.1e-23
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 770 AKLLNSLLKLRQACCHP 786
A +L LL+LRQ C HP
Sbjct: 1274 AHVLEMLLRLRQVCDHP 1290
>UNIPROTKB|F1N2E8 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0008270 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104545 OMA:WCGSIPW
EMBL:DAAA02007409 IPI:IPI00710264 UniGene:Bt.10162 PRIDE:F1N2E8
Ensembl:ENSBTAT00000033711 Uniprot:F1N2E8
Length = 1163
Score = 283 (104.7 bits), Expect = 2.5e-23, Sum P(4) = 2.5e-23
Identities = 113/396 (28%), Positives = 174/396 (43%)
Query: 489 IEATDSPVATG-ATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDI 547
+ DS T TLI+CPA ++ W E+ +H L+ C+Y G + +
Sbjct: 632 LSKNDSSEFTSHGTLIICPASLIHHWKNEVEKHVSHNRLRVCLYHGPNRNQHAKV----- 686
Query: 548 SELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEA 607
L DIV+TTY +L +++ D + + L R+ W R+ LDEA
Sbjct: 687 --LSTYDIVITTYSLLAKEIPTAKQ----DEQIPGANPSVEGTSSPLLRVVWARLILDEA 740
Query: 608 QMVESNAAAATEMAL-RLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVI 666
V+ N T MA+ +L A+ RW +TGTPIQ L D+Y LL+FL+ SPF + W
Sbjct: 741 HNVK-NPRVQTSMAVCKLQAQARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFKLW---- 795
Query: 667 RDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSD----------------ELQLPPQEECV 710
+ +NG E + + ++ R +K + L+L EE V
Sbjct: 796 KSQVDNGSKKGGERLNILTRSLLLRRTKDQLDSTGKPLVVLPHRKFQLHHLKLSEDEETV 855
Query: 711 SWLTF--SPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHA- 767
+ F S + +Y +HE+ G ++ R DN R SS + + A
Sbjct: 856 YSVLFARSRLALQYYLKRHES--GSSQS--GRSPDNPFNRVAQEFGSSGPGPSTAGSQAT 911
Query: 768 -EAAKLLNSLLKLRQACCHPQVGSSGL--RSLQQS--PLSMDEILMVLIGKTKIEGEEAL 822
A +L+ LL+LRQ CCH + S L L+ LS++E L L T E ++
Sbjct: 912 SSAVHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLALSLEEQLSAL---TLSEFHDSE 968
Query: 823 RKLVMALNGLA-GIALIE-KNLSQAVS-LYKEAMAV 855
++LNG + + L + K S +S L E AV
Sbjct: 969 PSASVSLNGKSFKVELFDDKRESTKISSLLAELEAV 1004
Score = 84 (34.6 bits), Expect = 2.5e-23, Sum P(4) = 2.5e-23
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPASDD 388
GGILAD+MGLGKT+ ++A I +K D
Sbjct: 595 GGILADDMGLGKTLTMIALILTQKKSKEKD 624
Score = 44 (20.5 bits), Expect = 2.5e-23, Sum P(4) = 2.5e-23
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 33 HGSEQPEKEELADVDHPFFVEVNRT 57
H QP KEE + +HP E T
Sbjct: 273 HSISQPLKEEHLNKEHPKSWEARET 297
Score = 43 (20.2 bits), Expect = 2.5e-23, Sum P(4) = 2.5e-23
Identities = 11/58 (18%), Positives = 24/58 (41%)
Query: 248 TKNDVSASQKHASFDVARFYEAIKRSKAEPMXXXXXXXXXXXXRPYQRRAAYWMVQRE 305
++N + A K S + + +++ E P+Q++A W++ RE
Sbjct: 532 SQNGLHAVWKITSEAIDELHRSLESCPGETAMAEDPAGLKISLLPHQKQALAWLLWRE 589
>WB|WBGene00020235 [details] [associations]
symbol:T05A12.4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006974 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
GeneTree:ENSGT00700000104571 KO:K15710 EMBL:FO081690
RefSeq:NP_001023359.1 UniGene:Cel.8101 ProteinModelPortal:H2L0J8
SMR:H2L0J8 PRIDE:H2L0J8 EnsemblMetazoa:T05A12.4a GeneID:177453
KEGG:cel:CELE_T05A12.4 CTD:177453 WormBase:T05A12.4a OMA:YLQPCEM
Uniprot:H2L0J8
Length = 1622
Score = 306 (112.8 bits), Expect = 5.9e-23, P = 5.9e-23
Identities = 98/387 (25%), Positives = 183/387 (47%)
Query: 485 CDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSI 544
C + +++ A G TLI+ P ++ QW EI++H ++K Y G R
Sbjct: 414 CSKCTSESENRRAVGTTLIILPESLIFQWFTEISKHCSD-NIKVMFYFGIRKHGYLQPCE 472
Query: 545 MDISELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICL 604
MD D++LTTYD L+ ++S ++ G R +R + + + + L + +WRI +
Sbjct: 473 MD-----SYDVILTTYDTLRNEMSFSEEK--GPPRNLRNESKTLNLTSSLMHVEFWRIIV 525
Query: 605 DEAQMVESNAAAA-TEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWI 663
DE+Q++ ++ T M ++L+A++ WC+TGTP+ + + +Y L FL PF +++
Sbjct: 526 DESQVLPHGVSSQLTRMLMKLHAENWWCVTGTPLVKSIAGIYPLFNFLNLFPFGSPQFFS 585
Query: 664 EVIRDPYENGDVG----AME-------FTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
+ + Y N + A++ F + ++M R +K S +L+LP E
Sbjct: 586 QYVHPQYLNFALSLRDEALDKNNLPRVFLLEILSKMMSRKTKQDKSVQLKLPKLTEVEKI 645
Query: 713 LTFSPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKL 772
+ F+ +EE Y+ + E RL+ NI++R + G+A + L + + K+
Sbjct: 646 IYFTTVEERQYKDEKE-----------RLR-NIVERAI-GNADNSDLLSDLQCRE---KV 689
Query: 773 LNSLLKLRQACCHPQVGSSGLRSLQQS-PLSMDEILMVLIGKTKIEGEEALRKLVMALNG 831
L L LRQ +G S + S L+ + ++ LI K + R+ + G
Sbjct: 690 LQELRLLRQIIL---LGQRKTESDKVSCVLAPETVIFKLIKNKKTTIKANFREYLSYSLG 746
Query: 832 LAGIALIEKNLSQAVSLYKEAMAVVEE 858
+AG+ ++ A+ Y A+ +E
Sbjct: 747 VAGVQILMDMPQTAIETYSSALINYDE 773
Score = 286 (105.7 bits), Expect = 8.3e-21, P = 8.3e-21
Identities = 108/437 (24%), Positives = 190/437 (43%)
Query: 335 STLFYNPFSGSLSLSP-------DYTSSYVF-GGILADEMGLGKTVELLACIFAHRKPAS 386
++L Y P G+++L+ D + GGILADEMGLGKT++ L+ I +RK +
Sbjct: 265 TSLVYYPSIGAIALNEMTIEERKDIEKRFTLKGGILADEMGLGKTIQALSLIATNRKHSK 324
Query: 387 DDSIFIDTAVQVTDDQKVNLRRLKRERVECICGAVSESRKYKGLWV-QCDI-------CD 438
+ I+ D + +V + + + I A S + KG Q DI CD
Sbjct: 325 VE-IY-DESGEVETVNRDESKSTNSSIAQQIKLAESSYAEMKGARQNQADIRYNLNSFCD 382
Query: 439 AWQHADCVGYSPRGKKRRSTFELKKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPVAT 498
+ C S + ++ K +K C + +++ A
Sbjct: 383 G-ETILCSNCSQMCSAKICGWDFDKFKNEKFQ--------------CSKCTSESENRRAV 427
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G TLI+ P ++ QW EI++H ++K Y G R MD D++LT
Sbjct: 428 GTTLIILPESLIFQWFTEISKHCSD-NIKVMFYFGIRKHGYLQPCEMD-----SYDVILT 481
Query: 559 TYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAAT 618
TYD L+ ++S ++ R K + +L+ FW I + + ++ T
Sbjct: 482 TYDTLRNEMSFSEEKGP-PRNLRNESKTLNLTSSLMHVEFWRIIVDESQVLPHGVSSQLT 540
Query: 619 EMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGDVG-- 676
M ++L+A++ WC+TGTP+ + + +Y L FL PF +++ + + Y N +
Sbjct: 541 RMLMKLHAENWWCVTGTPLVKSIAGIYPLFNFLNLFPFGSPQFFSQYVHPQYLNFALSLR 600
Query: 677 --AME-------FTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQSQH 727
A++ F + ++M R +K S +L+LP E + F+ +EE Y+ +
Sbjct: 601 DEALDKNNLPRVFLLEILSKMMSRKTKQDKSVQLKLPKLTEVEKIIYFTTVEERQYKDEK 660
Query: 728 ETCVGYAREVIQRLKDN 744
E R +++R N
Sbjct: 661 ERL----RNIVERAIGN 673
>ZFIN|ZDB-GENE-110411-73 [details] [associations]
symbol:si:ch1073-303l5.1 "si:ch1073-303l5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-110411-73 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104545 EMBL:CABZ01070143
EMBL:CU693447 IPI:IPI00993890 Ensembl:ENSDART00000126063
ArrayExpress:E7FD29 Bgee:E7FD29 Uniprot:E7FD29
Length = 1149
Score = 271 (100.5 bits), Expect = 5.6e-22, Sum P(3) = 5.6e-22
Identities = 101/364 (27%), Positives = 165/364 (45%)
Query: 494 SPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGA 553
S VA+ TLI+CPA ++ W EI + + L +Y G N S S L
Sbjct: 620 SIVASQGTLIICPASLVHHWKKEIDKRVKSSRLTVYLYHGP-NRQRS------ASVLAEH 672
Query: 554 DIVLTTYDVLKEDL---SHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMV 610
D+V+TTY ++ +++ D+++ D + +P LL R+ W R+ LDEA +
Sbjct: 673 DVVITTYSLVSKEIPVQKEDAEKPSKDSDHVASD-----LPPLL-RVAWARVILDEAHSI 726
Query: 611 ESNAAAATEMAL-RLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDP 669
+ N T MA+ +L A+ RW +TGTPIQ L D+Y LL+FL+ SPF + W +
Sbjct: 727 K-NPKVQTSMAVCKLRARSRWAVTGTPIQNNLLDMYSLLKFLRCSPFDEYKLW----KAQ 781
Query: 670 YENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLP----PQEEC-VSWLTFSPIEEHFYQ 724
+NG E + + ++ R +K + D P P C + L S E+ Y
Sbjct: 782 VDNGSKRGGERLNILTRALLLRRTKDQL-DATGKPLVSLPDRTCEIHRLKLSEDEQAVYD 840
Query: 725 SQHETCVGYAREVIQRLKDNILKR---NVP---------GHASSDALYNPIITHAEAA-K 771
+ ++R +D K+ + P G + D+ + A +
Sbjct: 841 VVFAQSRSTLQNYLKRHEDGNTKKGDTSNPFEKVVAREFGMSQQDSQSSSQQPQASSTIH 900
Query: 772 LLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVL----IGKTKIEGEEALRKLVM 827
+L+ LL+LRQ CCH + ++L QS L D + + L + E ++ K +
Sbjct: 901 ILSLLLRLRQCCCHLSLLK---KTLDQSELQGDGVALSLEEQLCALSLSEPSDSENKDTV 957
Query: 828 ALNG 831
+LNG
Sbjct: 958 SLNG 961
Score = 82 (33.9 bits), Expect = 5.6e-22, Sum P(3) = 5.6e-22
Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 359 GGILADEMGLGKTVELLACIFAHRK 383
GGILAD+MGLGKT+ ++A I + +K
Sbjct: 581 GGILADDMGLGKTLTMIALILSQKK 605
Score = 44 (20.5 bits), Expect = 5.6e-22, Sum P(3) = 5.6e-22
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 292 PYQRRAAYWMVQRE 305
P+Q+RA W++ RE
Sbjct: 562 PHQKRALTWLLWRE 575
>TAIR|locus:2008096 [details] [associations]
symbol:AT1G50410 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000241058 EMBL:AY039939 EMBL:AY142669
IPI:IPI00533542 RefSeq:NP_564568.1 UniGene:At.15795
ProteinModelPortal:Q94BR5 SMR:Q94BR5 PaxDb:Q94BR5 PRIDE:Q94BR5
EnsemblPlants:AT1G50410.1 GeneID:841463 KEGG:ath:AT1G50410
TAIR:At1g50410 InParanoid:Q94BR5 OMA:EVRVMIM PhylomeDB:Q94BR5
ProtClustDB:CLSN2684720 ArrayExpress:Q94BR5 Genevestigator:Q94BR5
Uniprot:Q94BR5
Length = 981
Score = 211 (79.3 bits), Expect = 5.9e-22, Sum P(4) = 5.9e-22
Identities = 44/133 (33%), Positives = 70/133 (52%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L ++ W+R+ LDEAQ ++++ L AK RWC++GTPIQ +DDLY RFLK
Sbjct: 466 LAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKY 525
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDE---LQLPPQEECV 710
P+++ + + I+ P + + + IM R +K + D + LPP+ +
Sbjct: 526 DPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIINLPPKTINL 585
Query: 711 SWLTFSPIEEHFY 723
S + FS E FY
Sbjct: 586 SQVDFSVEERSFY 598
Score = 96 (38.9 bits), Expect = 5.9e-22, Sum P(4) = 5.9e-22
Identities = 28/86 (32%), Positives = 39/86 (45%)
Query: 497 ATGATLIVCPAPILAQWDAEITRH-TRPGSLKTCIYEGARNSSLSDTSIMDISELVGADI 555
A G TLIVCPA ++ QW E+ T L IY G + D EL D+
Sbjct: 342 AAG-TLIVCPASVVRQWARELDEKVTDEAKLSVLIYHGGNRTK-------DPIELAKYDV 393
Query: 556 VLTTYDVLKEDLSHDS--DRHEGDRR 579
V+TTY ++ ++ D E D +
Sbjct: 394 VMTTYAIVSNEVPKQPLVDDDENDEK 419
Score = 73 (30.8 bits), Expect = 5.9e-22, Sum P(4) = 5.9e-22
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 354 SSYVFGGILADEMGLGKTVELLACI 378
S + GGILAD+ GLGKTV +A I
Sbjct: 244 SLHCMGGILADDQGLGKTVSTIALI 268
Score = 61 (26.5 bits), Expect = 5.9e-22, Sum P(4) = 5.9e-22
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 770 AKLLNSLLKLRQACCHPQV 788
A +L LL+LRQAC HPQ+
Sbjct: 623 ANILLMLLRLRQACDHPQL 641
>TAIR|locus:2089318 [details] [associations]
symbol:AT3G16600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002686
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:QACNHPQ
IPI:IPI00536054 RefSeq:NP_188282.1 UniGene:At.53337
ProteinModelPortal:F4J2R0 PRIDE:F4J2R0 EnsemblPlants:AT3G16600.1
GeneID:820911 KEGG:ath:AT3G16600 Uniprot:F4J2R0
Length = 638
Score = 244 (91.0 bits), Expect = 6.7e-22, Sum P(4) = 6.7e-22
Identities = 57/202 (28%), Positives = 101/202 (50%)
Query: 498 TGATLIVCPAPILAQWDAEITRHTRPG-SLKTCIYEGARNSSLSDTSIMDISELVGADIV 556
+G TLIVCPA ++ QW E+ L ++ G+ + D +E+ D+V
Sbjct: 114 SGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTK-------DPTEIAIYDVV 166
Query: 557 LTTYDVLKEDLSHDS--DRHEGDRRFMRFQKRYPVIPTL--LTRIFWWRICLDEAQMVES 612
+TTY ++ ++ + +R++ R + P + L R+ W R+ LDEA +++
Sbjct: 167 MTTYAIVTNEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKN 226
Query: 613 NAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYEN 672
+ + L AK RWC+TGTPI+ K+DDLY RFL+ P+++ + + I+ P +
Sbjct: 227 HRTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPIDK 286
Query: 673 GDVGAMEFTHKFFKEIMCRSSK 694
+ + + IM R +K
Sbjct: 287 KPLHGYKKLQAILRGIMLRRTK 308
Score = 71 (30.1 bits), Expect = 6.7e-22, Sum P(4) = 6.7e-22
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 354 SSYVFGGILADEMGLGKTVELLACIFAHR 382
S + GGILAD+ GLGKT+ ++ I +
Sbjct: 71 SRHCLGGILADDQGLGKTISTISLILLQK 99
Score = 67 (28.6 bits), Expect = 6.7e-22, Sum P(4) = 6.7e-22
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 766 HAEAAKLLNSLLKLRQACCHPQV 788
H A LL LL+LRQAC HPQ+
Sbjct: 334 HEHMAYLLVMLLRLRQACNHPQL 356
Score = 44 (20.5 bits), Expect = 6.7e-22, Sum P(4) = 6.7e-22
Identities = 14/74 (18%), Positives = 32/74 (43%)
Query: 971 ITVCENLKQKYLSGFSVKLSVAQQEF-RKSYMQVCNALDDREKQYSAWWLEALHHA---E 1026
I + ++++ L+ K ++ K++ + C++ + R + S +W +
Sbjct: 562 IAIKNTVEERILTLHERKRNIVASALGEKNWQKFCDSTNTRRSRISVFWCVEYPRVFIDK 621
Query: 1027 GNKDFSAELIRKIE 1040
NK FS + K E
Sbjct: 622 RNKTFSYLISHKCE 635
>UNIPROTKB|I3L7V5 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 EMBL:CU468873 EMBL:AEMK01166609
EMBL:CU207228 Ensembl:ENSSSCT00000031433 Uniprot:I3L7V5
Length = 1147
Score = 287 (106.1 bits), Expect = 7.4e-22, Sum P(3) = 7.4e-22
Identities = 102/366 (27%), Positives = 159/366 (43%)
Query: 489 IEATDSPVATG-ATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDI 547
+ TDS T TLI+CPA ++ W E+ + L+ +Y G + ++ +
Sbjct: 615 LSKTDSSEFTSHRTLIICPASLIHHWKNEVQKRVCNNELRVYLYHGPNRDQ--NAKVLSM 672
Query: 548 SELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEA 607
DIV+TTY +L +++ + EG + P L RI W RI LDEA
Sbjct: 673 Y-----DIVITTYSLLAKEIP--TKEQEGAVPGAELSVQGTASPLL--RIVWARIILDEA 723
Query: 608 QMVESNAAAATEMAL-RLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVI 666
V+ N T MA+ +L A+ RW +TGTPIQ L D+Y LL+FL+ SPF W
Sbjct: 724 HTVK-NPRVQTSMAVCKLQAQARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFSLW---- 778
Query: 667 RDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDE----LQLPPQEECVSWLTFSPIEEHF 722
+ +NG E + K ++ R +K + ++LP ++ + L S EE
Sbjct: 779 KSQVDNGSKKGGERLNILTKSLLLRRTKDQLDSTGKPLVELPQRQFQLHRLKLSEDEETV 838
Query: 723 YQ----SQHETCVGYAREV------IQRLKDNILKRNVPGHASSDALYNPI---ITHAEA 769
Y Y + R DN + V SD P+ + +
Sbjct: 839 YNVLFARSRSDLQSYLKRYETGDRSSARSPDNPFNKEVAQEFGSDGPRRPVAGDLQGSST 898
Query: 770 AKLLNSLLKLRQACCHPQVGSSGLRSLQQSP----LSMDEILMVLIGKTKIEGEEALRKL 825
+L+ LL+LRQ CCH + S L + LS++E L L +++ E+ +
Sbjct: 899 VHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLVLSLEEQLSALT-LSELHSSESSASV 957
Query: 826 VMALNG 831
+LNG
Sbjct: 958 --SLNG 961
Score = 69 (29.3 bits), Expect = 7.4e-22, Sum P(3) = 7.4e-22
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 359 GGIL--ADEMGLGKTVELLACIFAHR---KPASDDSIFIDTAVQVTDDQKVNLRR 408
GGIL AD+MGLGKT+ ++A I + K D T + TD + R
Sbjct: 573 GGILFPADDMGLGKTLTMIALILTQKNQEKNKEKDKTTSSTWLSKTDSSEFTSHR 627
Score = 39 (18.8 bits), Expect = 7.4e-22, Sum P(3) = 7.4e-22
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 1011 EKQYSAWWLEALHHAEGNKD-------FSAELIRKIEEA--ISGSLNKSRALRTASRTSL 1061
E+Q SA L LH +E + F EL + ++ IS L + A+R S +
Sbjct: 937 EEQLSALTLSELHSSESSASVSLNGTCFKVELFDSMRQSTKISSLLAELEAIRRNSGSQK 996
Query: 1062 S 1062
S
Sbjct: 997 S 997
>UNIPROTKB|F1SAY2 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 OMA:WCGSIPW EMBL:CU468873
EMBL:AEMK01166609 EMBL:CU207228 Ensembl:ENSSSCT00000007376
Uniprot:F1SAY2
Length = 1169
Score = 287 (106.1 bits), Expect = 8.0e-22, Sum P(3) = 8.0e-22
Identities = 102/366 (27%), Positives = 159/366 (43%)
Query: 489 IEATDSPVATG-ATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDI 547
+ TDS T TLI+CPA ++ W E+ + L+ +Y G + ++ +
Sbjct: 637 LSKTDSSEFTSHRTLIICPASLIHHWKNEVQKRVCNNELRVYLYHGPNRDQ--NAKVLSM 694
Query: 548 SELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEA 607
DIV+TTY +L +++ + EG + P L RI W RI LDEA
Sbjct: 695 Y-----DIVITTYSLLAKEIP--TKEQEGAVPGAELSVQGTASPLL--RIVWARIILDEA 745
Query: 608 QMVESNAAAATEMAL-RLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVI 666
V+ N T MA+ +L A+ RW +TGTPIQ L D+Y LL+FL+ SPF W
Sbjct: 746 HTVK-NPRVQTSMAVCKLQAQARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFSLW---- 800
Query: 667 RDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDE----LQLPPQEECVSWLTFSPIEEHF 722
+ +NG E + K ++ R +K + ++LP ++ + L S EE
Sbjct: 801 KSQVDNGSKKGGERLNILTKSLLLRRTKDQLDSTGKPLVELPQRQFQLHRLKLSEDEETV 860
Query: 723 YQ----SQHETCVGYAREV------IQRLKDNILKRNVPGHASSDALYNPI---ITHAEA 769
Y Y + R DN + V SD P+ + +
Sbjct: 861 YNVLFARSRSDLQSYLKRYETGDRSSARSPDNPFNKEVAQEFGSDGPRRPVAGDLQGSST 920
Query: 770 AKLLNSLLKLRQACCHPQVGSSGLRSLQQSP----LSMDEILMVLIGKTKIEGEEALRKL 825
+L+ LL+LRQ CCH + S L + LS++E L L +++ E+ +
Sbjct: 921 VHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLVLSLEEQLSALT-LSELHSSESSASV 979
Query: 826 VMALNG 831
+LNG
Sbjct: 980 --SLNG 983
Score = 69 (29.3 bits), Expect = 8.0e-22, Sum P(3) = 8.0e-22
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 359 GGIL--ADEMGLGKTVELLACIFAHR---KPASDDSIFIDTAVQVTDDQKVNLRR 408
GGIL AD+MGLGKT+ ++A I + K D T + TD + R
Sbjct: 595 GGILFPADDMGLGKTLTMIALILTQKNQEKNKEKDKTTSSTWLSKTDSSEFTSHR 649
Score = 39 (18.8 bits), Expect = 8.0e-22, Sum P(3) = 8.0e-22
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 1011 EKQYSAWWLEALHHAEGNKD-------FSAELIRKIEEA--ISGSLNKSRALRTASRTSL 1061
E+Q SA L LH +E + F EL + ++ IS L + A+R S +
Sbjct: 959 EEQLSALTLSELHSSESSASVSLNGTCFKVELFDSMRQSTKISSLLAELEAIRRNSGSQK 1018
Query: 1062 S 1062
S
Sbjct: 1019 S 1019
>SGD|S000004022 [details] [associations]
symbol:RAD5 "DNA helicase" species:4932 "Saccharomyces
cerevisiae" [GO:0010994 "free ubiquitin chain polymerization"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042276
"error-prone translesion synthesis" evidence=IMP] [GO:0009378
"four-way junction helicase activity" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IGI;IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000403 "Y-form
DNA binding" evidence=IDA] [GO:0000400 "four-way junction DNA
binding" evidence=IDA] [GO:0006301 "postreplication repair"
evidence=IDA] [GO:0000209 "protein polyubiquitination"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR014905
Pfam:PF00176 Pfam:PF00271 Pfam:PF08797 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SMART:SM00910
SGD:S000004022 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 EMBL:BK006945
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006302
GO:GO:0000209 InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000403 GO:GO:0009378
GO:GO:0008094 GO:GO:0042276 GeneTree:ENSGT00700000104586
GO:GO:0000400 GO:GO:0010994 KO:K15505 HOGENOM:HOG000040492
OMA:MDPWWSP OrthoDB:EOG4J40R2 EMBL:M96644 EMBL:Z73204 EMBL:S46103
PIR:S64859 RefSeq:NP_013132.1 ProteinModelPortal:P32849 SMR:P32849
DIP:DIP-5830N IntAct:P32849 MINT:MINT-2784640 STRING:P32849
PaxDb:P32849 PeptideAtlas:P32849 EnsemblFungi:YLR032W GeneID:850719
KEGG:sce:YLR032W CYGD:YLR032w NextBio:966793 Genevestigator:P32849
GermOnline:YLR032W Uniprot:P32849
Length = 1169
Score = 235 (87.8 bits), Expect = 8.0e-22, Sum P(5) = 8.0e-22
Identities = 63/236 (26%), Positives = 117/236 (49%)
Query: 495 PVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD 554
P A+ TLIV P +L QW E T+ + +Y G SSL +++ ++
Sbjct: 582 PYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLK--TLLTKTK-TPPT 638
Query: 555 IVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNA 614
+VLTTY +++ + + S +G R I + L + ++RI +DE + +
Sbjct: 639 VVLTTYGIVQNEWTKHS---KG-----RMTDEDVNISSGLFSVNFYRIIIDEGHNIRNRT 690
Query: 615 AAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGD 674
++ + L K +W +TGTPI +LDDLY L++FL+ P+ +W + P+E+ +
Sbjct: 691 TVTSKAVMALQGKCKWVLTGTPIINRLDDLYSLVKFLELDPWRQINYWKTFVSTPFESKN 750
Query: 675 VG-AMEFTHKFFKEIMCRSSKVHVSDE-----LQLPPQEECVSWLTFSPIEEHFYQ 724
A + + + ++ R +K + D+ ++LPP+E + L FS ++ Y+
Sbjct: 751 YKQAFDVVNAILEPVLLRRTK-QMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYK 805
Score = 96 (38.9 bits), Expect = 8.0e-22, Sum P(5) = 8.0e-22
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 338 FY-NPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFA--HRKPASDDSIFIDT 394
FY N SG SL+ + + GGIL+DEMGLGKTV + + + H D +F
Sbjct: 505 FYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIE 564
Query: 395 AVQVTDD 401
V+D+
Sbjct: 565 NTAVSDN 571
Score = 62 (26.9 bits), Expect = 8.0e-22, Sum P(5) = 8.0e-22
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 742 KDNILKRNVPGHASSDALYNPIITHAEAA---------------KLLNSLLKLRQACCHP 786
K+ ++KR +P S D LY ++ AE + +L +L+LRQ CCHP
Sbjct: 787 KEVVIKR-LPFSKSQDLLYKFLLDKAEVSVKSGIARGDLLKKYSTILVHILRLRQVCCHP 845
Query: 787 Q-VGS 790
+GS
Sbjct: 846 GLIGS 850
Score = 53 (23.7 bits), Expect = 8.0e-22, Sum P(5) = 8.0e-22
Identities = 29/132 (21%), Positives = 57/132 (43%)
Query: 180 EDMSSLRVRVEILKSAFDACE-SLLENSRKTWKKSMINVMSWLRPEVLTSEARYGVSKSM 238
E++ S R+ +LK FD + + +K +K I + S PE++ + + +
Sbjct: 329 EELESRSKRLALLK-LFDKLRLKPILDEQKALEKHKIELNS--DPEIIDLD-NDEICSNQ 384
Query: 239 EMDVELMTRTKNDVSASQKHASFDVAR-FYEAIKRS---KAEPMXXXXXXXXXXXXRPYQ 294
+V R D ++ + + + FY+A + S K+ P R YQ
Sbjct: 385 VTEVHNNLR---DTQHEEETMNLNQLKTFYKAAQSSESLKSLPETEPSRDVFKLELRNYQ 441
Query: 295 RRAAYWMVQREK 306
++ WM++RE+
Sbjct: 442 KQGLTWMLRREQ 453
Score = 38 (18.4 bits), Expect = 8.0e-22, Sum P(5) = 8.0e-22
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 105 VNEFIGRIKLGHWPLLSSNDVTLE 128
V+E I +I +PLLSS++++ E
Sbjct: 242 VSEDIAQIL---YPLLSSHEISFE 262
>POMBASE|SPBC582.10c [details] [associations]
symbol:SPBC582.10c "ATP-dependent DNA helicase Rhp16b
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000113
"nucleotide-excision repair factor 4 complex" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
PomBase:SPBC582.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0003677
EMBL:CU329671 GO:GO:0000113 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006289
GO:GO:0008094 EMBL:AB027965 PIR:T37973 RefSeq:NP_595178.1
ProteinModelPortal:Q10332 EnsemblFungi:SPBC582.10c.1 GeneID:2540907
KEGG:spo:SPBC582.10c HOGENOM:HOG000241058 OMA:QACNHPQ
OrthoDB:EOG44XNQX NextBio:20802022 Uniprot:Q10332
Length = 830
Score = 245 (91.3 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 80/295 (27%), Positives = 136/295 (46%)
Query: 500 ATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTT 559
+TL+V P ++ QW++E+ ++ L +Y GA L + I E D+V+TT
Sbjct: 290 STLVVAPLSLIKQWESEVQTKSK---LTAIVYHGASRYKL----LKVIHEY---DVVITT 339
Query: 560 YDVL-KEDLSHDSDRHEGDR--RFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAA 616
Y +L E +SH++ +G ++K+ P L +WWRI LDEA +++ ++
Sbjct: 340 YQILVSEWVSHNTTGTDGKSPTEAKSYEKKKPS----LFAFYWWRIILDEAHTIKNKSSK 395
Query: 617 ATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGDVG 676
+ L +RWC+TGTP+Q +D+LY L++FL +PF+ W + I P G+
Sbjct: 396 SALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPFNDQSVWKDQISLPLCQGEEN 455
Query: 677 AM-EFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW---LTFSPIEEHFYQSQHETCVG 732
+ + IM R +K + + L + I + F +S+ +
Sbjct: 456 LVFKRLRMLLSVIMLRRTKTLLEANAGKDGTGGALKLSKRLVYKVICK-FEESERDFYSN 514
Query: 733 YAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCHPQ 787
AR + +R N + G ++ +L LL+LRQAC HPQ
Sbjct: 515 LARNM-ERTMSNFVNSGKLGKNYTN--------------ILCLLLRLRQACNHPQ 554
Score = 97 (39.2 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 353 TSSYVFGGILADEMGLGKTVELLACIFAHRKPASDDSI 390
+ S GGILAD+MGLGKT++++A I +H P SI
Sbjct: 251 SKSSASGGILADDMGLGKTIQMIALILSHPLPKKKHSI 288
>UNIPROTKB|E2RGF7 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0008270 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00700000104545 OMA:WCGSIPW EMBL:AAEX03011013
Ensembl:ENSCAFT00000015640 Uniprot:E2RGF7
Length = 1150
Score = 277 (102.6 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 96/318 (30%), Positives = 143/318 (44%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
TLI+CPA ++ W E+ + +L+ C+Y G + L DIV+TTY
Sbjct: 628 TLIICPASLIHHWKNEVMKRVSSNTLRVCLYHGPNRDQRAKV-------LSTYDIVITTY 680
Query: 561 DVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATEM 620
++L +++ + + EG + T L RI W RI LDEA V N T M
Sbjct: 681 NLLAKEIP--TQKEEGAIPGANPSMGKDIAKTPLLRIVWARIILDEAHCVR-NPRVQTSM 737
Query: 621 AL-RLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGDVGAME 679
A+ +L A RW +TGTPIQ L D+Y LL+FL+ SPF + W + +NG E
Sbjct: 738 AVCKLQAHARWAVTGTPIQNTLLDMYSLLKFLRCSPFDDFQLW----KSQVDNGSKKGGE 793
Query: 680 FTHKFFKEIMCRSSKVHVSDE----LQLPPQEECVSWLTFSPIEEHFYQSQHETCVGYAR 735
K ++ R +K + + LP ++ V L S EE+ Y + +R
Sbjct: 794 RLSILTKSLLLRRTKDQLDSTGKPLVMLPQRQFHVHRLKLSEDEENVYS----VLLAKSR 849
Query: 736 EVIQR-LK------DNILKRNVPGHASSDALYN-------PIITHAEAAK------LLNS 775
+Q LK N+ R+ PG+ S P + A++ + LL
Sbjct: 850 SALQSYLKAGREGGGNLSGRS-PGNPFSKVAQEFGSSRPGPCVA-ADSQRPGTPHLLLTR 907
Query: 776 LLKLRQACCHPQVGSSGL 793
LL+LRQ CCH + S L
Sbjct: 908 LLRLRQCCCHLSLLKSAL 925
Score = 76 (31.8 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 359 GGILADEMGLGKTVELLACIFAHR 382
GGILAD+MGLGKT+ ++A I +
Sbjct: 575 GGILADDMGLGKTLTMIALILTQK 598
Score = 38 (18.4 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 236 KSMEMDVELMTRTKNDVSASQKHASFDVARFYEAIKRSKAEPM 278
KS + VE + + + S V + E ++ +A+P+
Sbjct: 223 KSKQCHVEELRKPSGSLQVKSNIESHHVEKKSEPLREKEAKPL 265
>ASPGD|ASPL0000065871 [details] [associations]
symbol:AN7538 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 EMBL:AACD01000129 EMBL:BN001304 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
OrthoDB:EOG44XNQX RefSeq:XP_680807.1 ProteinModelPortal:Q5AVZ2
EnsemblFungi:CADANIAT00000644 GeneID:2869681 KEGG:ani:AN7538.2
HOGENOM:HOG000215811 OMA:FMKRRTK Uniprot:Q5AVZ2
Length = 1132
Score = 216 (81.1 bits), Expect = 3.0e-21, Sum P(4) = 3.0e-21
Identities = 65/203 (32%), Positives = 100/203 (49%)
Query: 597 IFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
++W+RI LDEA +++ A AT+ A L A++RWC++GTP+Q LD+L L+RFL+ P+
Sbjct: 495 VYWYRIILDEAHTIKNRNAKATQAAYALDAEYRWCLSGTPMQNNLDELQSLIRFLRIKPY 554
Query: 657 SISRWWIEVIRDPYENGDVG-AMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLT- 714
+ W + I P NG G A+E K M R +K + L P EE
Sbjct: 555 NDLANWKDQITRPLANGRGGLAIERLQVVLKAFMKRRTKDVLKLNANLKPGEEADGEKKN 614
Query: 715 --FSPIEEHFYQSQHETCVGYAR--EVIQRLKDNILKRNVPGHASSDALYNPIITHAEAA 770
F ++ + + G E +++ DN L++ + G + D +A A
Sbjct: 615 PGFQIVKREVVKVAVDFMPGEKNFYERLEQRTDNSLEKMM-GDSKID--------YAGAL 665
Query: 771 KLLNSLLKLRQACCHPQVGSSGL 793
LL L+LRQ C HP + S L
Sbjct: 666 TLL---LRLRQCCNHPDLVRSDL 685
Score = 91 (37.1 bits), Expect = 3.0e-21, Sum P(4) = 3.0e-21
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 486 DELIEATDSPVATG-ATLIVCPAPILAQWDAEITRHTRPGS-LKTCIYEGARNSSLSDTS 543
+E E+ + P +TL+V P ++ QW++EI P L+ +Y G + +D S
Sbjct: 404 EESAESRNLPKGLSKSTLVVAPLALIKQWESEIKTKVEPSHRLRVLVYHGNARAKATD-S 462
Query: 544 IMDISELVGADIVLTTYDVLKED 566
+ D D+V+TTY L +
Sbjct: 463 LDDY------DVVITTYGTLTSE 479
Score = 88 (36.0 bits), Expect = 3.0e-21, Sum P(4) = 3.0e-21
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKP 384
GGILAD+MGLGKTV+ +A + ++KP
Sbjct: 357 GGILADDMGLGKTVQAIALMLTNQKP 382
Score = 42 (19.8 bits), Expect = 3.0e-21, Sum P(4) = 3.0e-21
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 292 PYQRRAAYWMVQREKG 307
P+QR+ WM +E G
Sbjct: 327 PHQRQGVNWMCAKEIG 342
>TAIR|locus:2095360 [details] [associations]
symbol:AT3G20010 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010050
"vegetative phase change" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031507 "heterochromatin assembly" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] [GO:0045787 "positive regulation of cell
cycle" evidence=RCA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 Prosite:PS00518
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AP002050 HSSP:Q99728
HOGENOM:HOG000241058 ProtClustDB:CLSN2684720 IPI:IPI00543291
RefSeq:NP_188635.1 UniGene:At.43523 ProteinModelPortal:Q9LHE4
SMR:Q9LHE4 PaxDb:Q9LHE4 PRIDE:Q9LHE4 EnsemblPlants:AT3G20010.1
GeneID:821539 KEGG:ath:AT3G20010 TAIR:At3g20010 InParanoid:Q9LHE4
OMA:SSAICYE PhylomeDB:Q9LHE4 Genevestigator:Q9LHE4 Uniprot:Q9LHE4
Length = 1047
Score = 205 (77.2 bits), Expect = 3.7e-21, Sum P(4) = 3.7e-21
Identities = 44/134 (32%), Positives = 69/134 (51%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L ++ W+RI LDEAQ +++ L AK RWC++GTPIQ +DDLY RFL+
Sbjct: 537 LGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLRY 596
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDE---LQLPPQEECV 710
P+++ + + I+ P + + IM R +K + D + LPP+ +
Sbjct: 597 DPYAVYKSFYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKGTLLDGKPIINLPPKVVNL 656
Query: 711 SWLTFSPIEEHFYQ 724
S + FS E FY+
Sbjct: 657 SQVDFSVAERSFYK 670
Score = 95 (38.5 bits), Expect = 3.7e-21, Sum P(4) = 3.7e-21
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 497 ATGATLIVCPAPILAQWDAEITRHTRPGS-LKTCIYEGARNSSLSDTSIMDISELVGADI 555
A G TLIVCPA ++ QW E+ S L +Y G+ + D +EL D+
Sbjct: 413 AAG-TLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTK-------DPNELAEYDV 464
Query: 556 VLTTYDVLKEDLSHDS--DRHEGDRR 579
V+TTY ++ + + D E D +
Sbjct: 465 VVTTYAIVTNEAPNKFLVDEDENDEK 490
Score = 75 (31.5 bits), Expect = 3.7e-21, Sum P(4) = 3.7e-21
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 353 TSSYVF-GGILADEMGLGKTVELLACIFAHR---KPASDDSIFIDTAVQV--TDDQKVNL 406
TSS+ GGILAD+ GLGKTV +A I + + S+ S +T V DD+ N
Sbjct: 297 TSSFNCPGGILADDQGLGKTVSTIALILKQKIVSQLKSESSCKQETEALVLDADDESDNA 356
Query: 407 R 407
+
Sbjct: 357 K 357
Score = 60 (26.2 bits), Expect = 3.7e-21, Sum P(4) = 3.7e-21
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 770 AKLLNSLLKLRQACCHPQV 788
A +L LL+LRQAC HPQ+
Sbjct: 694 ANILLLLLRLRQACDHPQL 712
>UNIPROTKB|E1C366 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR010666
Pfam:PF00176 Pfam:PF00271 Pfam:PF06839 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 EMBL:AADN02032807 IPI:IPI00602086
Ensembl:ENSGALT00000024603 Uniprot:E1C366
Length = 1150
Score = 264 (98.0 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 106/372 (28%), Positives = 161/372 (43%)
Query: 489 IEATDSPVATG-ATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDI 547
+ DS V +TLI+CPA ++ W EI R G L+ +Y G ++ +
Sbjct: 614 LSRNDSTVIPSCSTLIICPASLIHHWKKEIDRRVSFGKLRVYLYHGPNREKHAEV----L 669
Query: 548 SELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEA 607
SE DIV+TTY +L +++ + E + LL R+ W R+ LDEA
Sbjct: 670 SEY---DIVVTTYSLLSKEVPTSKEEGEFPAKDHEVGSGSSACSPLL-RVAWARVILDEA 725
Query: 608 QMVESNAAAATEMAL-RLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWW-IEV 665
++ N T +A+ +L A RW +TGTPIQ L D+Y LLRFL+ SPF + W +V
Sbjct: 726 HTIK-NPKVQTSIAVCKLRASARWAVTGTPIQNNLLDMYSLLRFLRCSPFDEYKVWKYQV 784
Query: 666 IRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDE----LQLPPQEECVSWLTFSPIEEH 721
+ + GD ++ + ++ R +K + + LP + + L S EE
Sbjct: 785 DNNTKKGGDRLSL-----LTRSLLLRRTKDQLDSTGKPLVSLPQRSMQLHQLKLSA-EE- 837
Query: 722 FYQSQHETCVGYAREVIQR-LKDNILKRNVPGHASSD-----------------ALYNPI 763
QS + +R +Q LK K HA S+ A
Sbjct: 838 --QSVYNVLFARSRSTLQSYLKRQEQKNESREHAGSNPFEKVAQDFGCSQKEFLASSQSA 895
Query: 764 ITHAEAAKLLNSLLKLRQACCHPQVGSSGL--RSLQQSPLSMDEILMVLIGKTKIEGEEA 821
+ + A +L+ LL+LRQ CCH + L +L LS+ I L T E +
Sbjct: 896 VQVSSTAHVLSMLLRLRQCCCHLSLLKVALDQANLANEGLSLS-IEEQLSALTLSELQTP 954
Query: 822 LRKLVMALNGLA 833
K + LNG A
Sbjct: 955 DSKSTVYLNGTA 966
Score = 77 (32.2 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 359 GGILADEMGLGKTVELLACIFAHRK 383
GGILAD+MGLGKT+ ++A I ++
Sbjct: 576 GGILADDMGLGKTLTMIALILTQKQ 600
>UNIPROTKB|Q9UNY4 [details] [associations]
symbol:TTF2 "Transcription termination factor 2"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=TAS] [GO:0008023
"transcription elongation factor complex" evidence=TAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=TAS] [GO:0006353
"DNA-dependent transcription, termination" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0008094 GO:GO:0008023 GO:GO:0006369
CleanEx:HS_TTF2 EMBL:AL445231 EMBL:AL391476 KO:K15173 EMBL:AF073771
EMBL:AF080255 EMBL:AK291017 EMBL:BC030058 IPI:IPI00290812
IPI:IPI00640904 RefSeq:NP_003585.3 UniGene:Hs.486818
ProteinModelPortal:Q9UNY4 SMR:Q9UNY4 IntAct:Q9UNY4 MINT:MINT-272557
STRING:Q9UNY4 PhosphoSite:Q9UNY4 DMDM:73920148 PaxDb:Q9UNY4
PRIDE:Q9UNY4 Ensembl:ENST00000369466 Ensembl:ENST00000427271
GeneID:8458 KEGG:hsa:8458 UCSC:uc001egx.1 UCSC:uc001egy.3 CTD:8458
GeneCards:GC01P117602 H-InvDB:HIX0000933 HGNC:HGNC:12398
HPA:HPA005776 MIM:604718 neXtProt:NX_Q9UNY4 PharmGKB:PA37063
HOGENOM:HOG000154708 HOVERGEN:HBG053179 InParanoid:Q9UNY4
OMA:WCGSIPW OrthoDB:EOG4GMTWH PhylomeDB:Q9UNY4 ChiTaRS:TTF2
GenomeRNAi:8458 NextBio:31654 Bgee:Q9UNY4 Genevestigator:Q9UNY4
GermOnline:ENSG00000116830 Uniprot:Q9UNY4
Length = 1162
Score = 265 (98.3 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 102/356 (28%), Positives = 157/356 (44%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
TLI+CPA ++ W E+ + L+ +Y G S + L DIV+TTY
Sbjct: 644 TLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARV-------LSTYDIVITTY 696
Query: 561 DVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATEM 620
++ +++ +++ E + P L RI W RI LDEA V+ N T +
Sbjct: 697 SLVAKEIP--TNKQEAEIPGANLNVEGTSTPLL--RIAWARIILDEAHNVK-NPRVQTSI 751
Query: 621 AL-RLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGDVGAME 679
A+ +L A RW +TGTPIQ L D+Y LL+FL+ SPF W R +NG E
Sbjct: 752 AVCKLQACARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFNLW----RSQVDNGSKKGGE 807
Query: 680 FTHKFFKEIMCRSSKVHVSDE---LQLPPQEEC-VSWLTFSPIEEHFYQSQHETCVGYAR 735
K ++ R +K + L + PQ + + L S EE Y +R
Sbjct: 808 RLSILTKSLLLRRTKDQLDSTGRPLVILPQRKFQLHHLKLSEDEETVYN----VFFARSR 863
Query: 736 EVIQR-LKDNILKRNVPGHASSDALYNPIIT-------HAEAAK--------LLNSLLKL 779
+Q LK + + N G + ++ + H+EAA +L+ LL+L
Sbjct: 864 SALQSYLKRHESRGNQSGRSPNNPFSRVALEFGSEEPRHSEAADSPRSSTVHILSQLLRL 923
Query: 780 RQACCHPQVGSSGLRSLQQSP----LSMDEILMVLIGKTKIEGEEALRKLVMALNG 831
RQ CCH + S L ++ LS++E L L T E ++ ++LNG
Sbjct: 924 RQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSAL---TLSELRDSEPSSTVSLNG 976
Score = 76 (31.8 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 359 GGILADEMGLGKTVELLACIFAHR 382
GGILAD+MGLGKT+ ++A I +
Sbjct: 591 GGILADDMGLGKTLTMIALILTQK 614
>UNIPROTKB|E1C1L9 [details] [associations]
symbol:TTF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271 Pfam:PF06839
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 OMA:WCGSIPW EMBL:AADN02032807
IPI:IPI00821328 Ensembl:ENSGALT00000036922 Uniprot:E1C1L9
Length = 1167
Score = 264 (98.0 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 106/372 (28%), Positives = 161/372 (43%)
Query: 489 IEATDSPVATG-ATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDI 547
+ DS V +TLI+CPA ++ W EI R G L+ +Y G ++ +
Sbjct: 631 LSRNDSTVIPSCSTLIICPASLIHHWKKEIDRRVSFGKLRVYLYHGPNREKHAEV----L 686
Query: 548 SELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEA 607
SE DIV+TTY +L +++ + E + LL R+ W R+ LDEA
Sbjct: 687 SEY---DIVVTTYSLLSKEVPTSKEEGEFPAKDHEVGSGSSACSPLL-RVAWARVILDEA 742
Query: 608 QMVESNAAAATEMAL-RLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWW-IEV 665
++ N T +A+ +L A RW +TGTPIQ L D+Y LLRFL+ SPF + W +V
Sbjct: 743 HTIK-NPKVQTSIAVCKLRASARWAVTGTPIQNNLLDMYSLLRFLRCSPFDEYKVWKYQV 801
Query: 666 IRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDE----LQLPPQEECVSWLTFSPIEEH 721
+ + GD ++ + ++ R +K + + LP + + L S EE
Sbjct: 802 DNNTKKGGDRLSL-----LTRSLLLRRTKDQLDSTGKPLVSLPQRSMQLHQLKLSA-EE- 854
Query: 722 FYQSQHETCVGYAREVIQR-LKDNILKRNVPGHASSD-----------------ALYNPI 763
QS + +R +Q LK K HA S+ A
Sbjct: 855 --QSVYNVLFARSRSTLQSYLKRQEQKNESREHAGSNPFEKVAQDFGCSQKEFLASSQSA 912
Query: 764 ITHAEAAKLLNSLLKLRQACCHPQVGSSGL--RSLQQSPLSMDEILMVLIGKTKIEGEEA 821
+ + A +L+ LL+LRQ CCH + L +L LS+ I L T E +
Sbjct: 913 VQVSSTAHVLSMLLRLRQCCCHLSLLKVALDQANLANEGLSLS-IEEQLSALTLSELQTP 971
Query: 822 LRKLVMALNGLA 833
K + LNG A
Sbjct: 972 DSKSTVYLNGTA 983
Score = 77 (32.2 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 359 GGILADEMGLGKTVELLACIFAHRK 383
GGILAD+MGLGKT+ ++A I ++
Sbjct: 593 GGILADDMGLGKTLTMIALILTQKQ 617
>UNIPROTKB|D4A1K7 [details] [associations]
symbol:Ttf2 "Protein Ttf2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR002464
InterPro:IPR010666 Pfam:PF00176 Pfam:PF06839 PROSITE:PS00690
RGD:1309145 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00782268 Ensembl:ENSRNOT00000056142 ArrayExpress:D4A1K7
Uniprot:D4A1K7
Length = 950
Score = 261 (96.9 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 93/319 (29%), Positives = 144/319 (45%)
Query: 489 IEATDSPVATGA-TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDI 547
+ DS V T TLIVCPA ++ W EI + L+ +Y G I
Sbjct: 611 LSKNDSSVFTSTGTLIVCPASLIHHWKNEIEKRVNSNKLRIYLYHGPNR-------IQHA 663
Query: 548 SELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEA 607
L DIV+TTY +L +++ + +HEG+ + P L ++ W RI LDEA
Sbjct: 664 KVLSTYDIVITTYSLLAKEIP--TAKHEGEVPGAKLSVEGISAPLL--QVVWARIILDEA 719
Query: 608 QMVESNAAAATEMAL-RLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVI 666
V+ N T +A+ +L A+ RW +TGTPIQ L D+Y L++FL+ SPF W
Sbjct: 720 HNVK-NPRVQTSIAVCKLQAQARWAVTGTPIQNNLLDMYSLMKFLRCSPFDEFSLW---- 774
Query: 667 RDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQ--LP-PQEEC-VSWLTFSPIEEHF 722
+ +NG + E K ++ R +K + + +P P C + L S E
Sbjct: 775 KSQVDNGSMKGGERLSILTKSLLLRRTKDQLDSTGKPLVPLPARSCQLHRLKLSEDERAV 834
Query: 723 YQSQHETCVGYAREVIQR-LKDNILKRNVPGHASSDALYN---------P-IITHAEAAK 771
Y + + +R +Q LK + + PG + + P T A++ +
Sbjct: 835 Y----DVFLARSRSALQSYLKRQEGRGSHPGRSPENPFSRVAQEFGSGVPQCSTAADSRR 890
Query: 772 -----LLNSLLKLRQACCH 785
+L+ LL+LRQ CCH
Sbjct: 891 PSTVHVLSQLLRLRQCCCH 909
Score = 75 (31.5 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 359 GGILADEMGLGKTVELLACIFAHR 382
GGILAD+MGLGKT+ ++A I +
Sbjct: 571 GGILADDMGLGKTLTMIALILTKK 594
>MGI|MGI:1921294 [details] [associations]
symbol:Ttf2 "transcription termination factor, RNA
polymerase II" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006353 "DNA-dependent transcription,
termination" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR010666 Pfam:PF00176 Pfam:PF00271
Pfam:PF06839 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1921294 GO:GO:0005524 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0008270 GO:GO:0006397
GO:GO:0005681 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0006353 EMBL:AL669937
EMBL:AL669872 GeneTree:ENSGT00700000104545 KO:K15173 CTD:8458
HOGENOM:HOG000154708 HOVERGEN:HBG053179 OMA:WCGSIPW
OrthoDB:EOG4GMTWH EMBL:BC087733 EMBL:BC096625 IPI:IPI00112371
RefSeq:NP_001013044.2 UniGene:Mm.270961 ProteinModelPortal:Q5NC05
SMR:Q5NC05 IntAct:Q5NC05 STRING:Q5NC05 PhosphoSite:Q5NC05
PRIDE:Q5NC05 Ensembl:ENSMUST00000076941 GeneID:74044 KEGG:mmu:74044
UCSC:uc008qrb.2 NextBio:339618 Bgee:Q5NC05 Genevestigator:Q5NC05
GermOnline:ENSMUSG00000033222 Uniprot:Q5NC05
Length = 1138
Score = 261 (96.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 103/365 (28%), Positives = 159/365 (43%)
Query: 489 IEATDSPVATGA-TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDI 547
+ DS V T + TLIVCPA ++ W E+ + L+ +Y G S +
Sbjct: 607 LSKNDSSVFTSSGTLIVCPASLIHHWKNEVEKRVTSNRLRIYLYHGPNRSRHAKV----- 661
Query: 548 SELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEA 607
L DIV+TTY +L +++ + + EG+ P L ++ W RI LDEA
Sbjct: 662 --LSTYDIVITTYSLLAKEIP--TTKQEGEVPGANLSVEGTSAPLL--QVVWARIILDEA 715
Query: 608 QMVESNAAAATEMAL-RLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVI 666
V+ N T +A+ +L A+ RW +TGTPIQ L D+Y L++FL+ SPF W
Sbjct: 716 HNVK-NPRVQTSIAVCKLQAQARWAVTGTPIQNNLLDMYSLMKFLRCSPFDEFSLW---- 770
Query: 667 RDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDE---LQLPPQEEC-VSWLTFSPIEEHF 722
+ +NG + E K ++ R +K + L P C + L S E
Sbjct: 771 KSQVDNGSMKGGERLSILTKSLLLRRTKDQLDSTGKPLVALPARRCQLHRLKLSEDERAV 830
Query: 723 YQ---SQHETCV-GYAREVIQR------LKDNILKRNVPGHASSDALYNPIIT--HAEAA 770
Y ++ + + Y + R DN R SS + P
Sbjct: 831 YDIFLARSRSALQSYLKRQEGRGSHHGRSPDNPFSRVAQEFGSSVSQGCPAADSQRPSTV 890
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQ-QSP---LSMDEILMVLIGKTKIEGEEALRKLV 826
+L+ LL+LRQ CCH + S L + +S LS++E L L +K++ E
Sbjct: 891 HVLSQLLRLRQCCCHLSLLKSALDPTELESEGLVLSLEEQLSALT-LSKVDVSEP--SPT 947
Query: 827 MALNG 831
++LNG
Sbjct: 948 VSLNG 952
Score = 75 (31.5 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 359 GGILADEMGLGKTVELLACIFAHR 382
GGILAD+MGLGKT+ ++A I +
Sbjct: 567 GGILADDMGLGKTLTMIALILTKK 590
>CGD|CAL0000717 [details] [associations]
symbol:orf19.5675 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IEA] [GO:0006333 "chromatin
assembly or disassembly" evidence=IEA] [GO:0007533 "mating type
switching" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 CGD:CAL0000717
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000129
EMBL:AACQ01000128 RefSeq:XP_713356.1 RefSeq:XP_713403.1
ProteinModelPortal:Q59UP5 GeneID:3644990 GeneID:3645010
KEGG:cal:CaO19.13120 KEGG:cal:CaO19.5675 Uniprot:Q59UP5
Length = 1102
Score = 266 (98.7 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 98/310 (31%), Positives = 143/310 (46%)
Query: 496 VATGATLIVCPAPILAQWDAEITRHTRPGS-LKTCIYEGARNSSLSDTSIMDISELVGAD 554
V+ G+ LIV P +L QW AEI T+ L IY G + D +M E D
Sbjct: 467 VSKGSNLIVAPVSLLRQWVAEIESKTKSDVFLSVGIYHGDDKKKMKDFDLM--KEY---D 521
Query: 555 IVLTTYDVL----KEDLSHDSDRHEGDRRFM----RFQKRYPVIPTLLTRIFWWRICLDE 606
IVL +Y L K+ S D H+ +R + R K Y V P + RI LDE
Sbjct: 522 IVLVSYTTLVQEWKKHFSEDLKEHQHERNYFPNRSRGGKSY-VSPFFSRESQFHRIILDE 580
Query: 607 AQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF-SISRWWIEV 665
AQ +++ A A++ L A++R+C+TGTP+Q +++LY LLRFLK P+ S ++ ++
Sbjct: 581 AQAIKNKQALASKAMTYLRAQYRFCLTGTPMQNGIEELYPLLRFLKIQPYCSEEKFRADI 640
Query: 666 IR------DPYENGDVG-AMEFTHKFFKEIMCRSSKVHVSDE---LQLPPQEECVSWLTF 715
+ D Y+ DV +M+ K I+ R +K + D L LP + ++T
Sbjct: 641 LTPIKSKTDLYDEYDVKESMKKIQVLLKSILLRRTKDSLIDGVPILNLPEKHVLSDYVTL 700
Query: 716 SPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNS 775
E +YQS +Q+ IL G H + A L
Sbjct: 701 ENDELAYYQSIESR--------VQKAAKKIL-----GE------------HTKNAPALTL 735
Query: 776 LLKLRQACCH 785
LL+LRQACCH
Sbjct: 736 LLRLRQACCH 745
Score = 76 (31.8 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 359 GGILADEMGLGKTVELLACIFAHR 382
GGILAD+MGLGKT++ LA + +
Sbjct: 446 GGILADDMGLGKTIQTLALMMVSK 469
Score = 40 (19.1 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 20/82 (24%), Positives = 33/82 (40%)
Query: 815 KIEGEEAL-RKLVMALNGLAGIALIEKNLSQAVSLY-KEAMAVVEEHSEDFRLDPLLNIH 872
KI+ + L R+ + NG A I K L + L+ K V S+ L L+ +
Sbjct: 904 KIKSNQTLIREFIKRDNGFESSAKIHKCLEMILELFSKNPGEKVIVFSQFTSLFDLMALV 963
Query: 873 LHHNLTEILPMVANCATELSQN 894
L + E L + ++ N
Sbjct: 964 LQNQHIEFLRYDGTMSMDVKNN 985
>TAIR|locus:2008470 [details] [associations]
symbol:EDA16 "embryo sac development arrest 16"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0009553
"embryo sac development" evidence=IMP] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
Prosite:PS00518 EMBL:CP002684 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 GO:GO:0009553 InterPro:IPR017907 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 IPI:IPI00518434 RefSeq:NP_176309.2
UniGene:At.36526 UniGene:At.68763 ProteinModelPortal:F4HTG1
SMR:F4HTG1 PRIDE:F4HTG1 EnsemblPlants:AT1G61140.1 GeneID:842407
KEGG:ath:AT1G61140 OMA:WADELHK Uniprot:F4HTG1
Length = 1280
Score = 205 (77.2 bits), Expect = 5.8e-20, Sum P(5) = 5.8e-20
Identities = 45/143 (31%), Positives = 71/143 (49%)
Query: 584 QKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDD 643
+K+ + L ++ W+R+ LDEAQ +++ L AK RWC++GTPIQ +DD
Sbjct: 772 KKKVEFLSGPLAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDD 831
Query: 644 LYGLLRFLKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDE--- 700
LY RFLK P+S + I++P V + K +M R +K + D
Sbjct: 832 LYSYFRFLKYDPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPI 891
Query: 701 LQLPPQEECVSWLTFSPIEEHFY 723
+ LPP+ + + F+ E FY
Sbjct: 892 ISLPPKSIELRKVDFTVEERDFY 914
Score = 95 (38.5 bits), Expect = 5.8e-20, Sum P(5) = 5.8e-20
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 486 DELIEATDSPVATGATLIVCPAPILAQWDAEITRH-TRPGSLKTCIYEGARNSSLSDTSI 544
D + + T P A TL+VCP ++ QW E+ + T +L +Y G+ +
Sbjct: 654 DSVGKVTGRPAA--GTLVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTK------ 705
Query: 545 MDISELVGADIVLTTYDVL-----KEDLSHDSDRHE 575
D EL D+V+TT+ ++ K+ L D D +
Sbjct: 706 -DPHELAKYDVVVTTFSIVSMEVPKQPLVDDEDEEK 740
Score = 81 (33.6 bits), Expect = 5.8e-20, Sum P(5) = 5.8e-20
Identities = 18/28 (64%), Positives = 20/28 (71%)
Query: 359 GGILADEMGLGKTVELLACIFAHR-KPA 385
GGILAD+ GLGKTV +A I R KPA
Sbjct: 579 GGILADDQGLGKTVSTIALILKERSKPA 606
Score = 51 (23.0 bits), Expect = 5.8e-20, Sum P(5) = 5.8e-20
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 772 LLNSLLKLRQACCHP 786
+L LL+LRQAC HP
Sbjct: 941 ILLMLLRLRQACDHP 955
Score = 38 (18.4 bits), Expect = 5.8e-20, Sum P(5) = 5.8e-20
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 293 YQRRAAYWMVQRE 305
+QR A WM Q+E
Sbjct: 559 HQRIALSWMAQKE 571
>TAIR|locus:2207175 [details] [associations]
symbol:AT1G05120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 Prosite:PS00518
EMBL:CP002684 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15083 IPI:IPI00524131 RefSeq:NP_172004.1 UniGene:At.49853
ProteinModelPortal:F4I795 SMR:F4I795 EnsemblPlants:AT1G05120.1
GeneID:839319 KEGG:ath:AT1G05120 OMA:IGQYKPI Uniprot:F4I795
Length = 833
Score = 138 (53.6 bits), Expect = 1.0e-19, Sum P(5) = 1.0e-19
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
+LL + W RI LDEA ++ + L A +RW ++GTP+Q ++ +LY L+RFL
Sbjct: 347 SLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLIRFL 406
Query: 652 KSSPFS 657
+ P+S
Sbjct: 407 QIRPYS 412
Score = 130 (50.8 bits), Expect = 1.0e-19, Sum P(5) = 1.0e-19
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 497 ATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIV 556
A G TL++CP ++QW EI R T PGS K +Y GA+ + +I E + D V
Sbjct: 192 AAGCTLVLCPLVAVSQWLNEIARFTSPGSTKVLVYHGAKRAK-------NIKEFMNYDFV 244
Query: 557 LTTYDVLKED 566
LTTY ++ +
Sbjct: 245 LTTYSTVESE 254
Score = 85 (35.0 bits), Expect = 1.0e-19, Sum P(5) = 1.0e-19
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 357 VFGGILADEMGLGKTVELLACIFAHRK 383
V GGILADEMG+GKT++ ++ + A R+
Sbjct: 157 VAGGILADEMGMGKTIQAISLVLARRE 183
Score = 65 (27.9 bits), Expect = 1.0e-19, Sum P(5) = 1.0e-19
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 661 WWIEVIRDP---YENGDVG--AMEFT-HKFFKEIMCRSSKVHVSDELQLPPQEECVSWLT 714
WW + + P Y + +G AM HK K+I+ R +K+ + +L LPP+ + T
Sbjct: 445 WWNKYVAKPITVYGSFGLGKRAMILLKHKVLKDILLRRTKLGRAADLALPPRIITLRRDT 504
Query: 715 FSPIEEHFYQSQHE 728
E +Y+S ++
Sbjct: 505 LDVKEFDYYESLYK 518
Score = 43 (20.2 bits), Expect = 1.0e-19, Sum P(5) = 1.0e-19
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 753 HASSDALYNPIITHAEAAKLLNS-------LLKLRQACCHP 786
+ +S A +N T+ EA L+N+ L +LRQA HP
Sbjct: 517 YKNSQAEFN---TYIEAGTLMNNYAHIFDLLTRLRQAVDHP 554
Score = 41 (19.5 bits), Expect = 4.1e-17, Sum P(4) = 4.1e-17
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 741 LKDNILKRNVPGHASSDALYNPIIT 765
LKD +L+R G A+ AL IIT
Sbjct: 475 LKDILLRRTKLGRAADLALPPRIIT 499
>SGD|S000000318 [details] [associations]
symbol:RAD16 "Protein that binds damaged DNA during NER"
species:4932 "Saccharomyces cerevisiae" [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000113 "nucleotide-excision repair factor 4
complex" evidence=IDA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0000715 "nucleotide-excision repair, DNA damage
recognition" evidence=IMP;IDA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SGD:S000000318 Pfam:PF00097 Prosite:PS00518
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:BK006936 GO:GO:0000113 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004386 EMBL:X78993 EMBL:X66247 InterPro:IPR017907
GO:GO:0042787 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031463 GO:GO:0000715 EMBL:M86929 EMBL:Z35983
EMBL:M83553 PIR:S25366 RefSeq:NP_009672.1 ProteinModelPortal:P31244
SMR:P31244 DIP:DIP-697N IntAct:P31244 MINT:MINT-616306
STRING:P31244 PaxDb:P31244 EnsemblFungi:YBR114W GeneID:852411
KEGG:sce:YBR114W CYGD:YBR114w GeneTree:ENSGT00700000104545
HOGENOM:HOG000179829 KO:K15083 OMA:GVVLNNY OrthoDB:EOG4Q5CXS
NextBio:971261 Genevestigator:P31244 GermOnline:YBR114W
Uniprot:P31244
Length = 790
Score = 236 (88.1 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 57/157 (36%), Positives = 88/157 (56%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
+L+V P L QW EI +HT+ G LK IY GA ++ DI +L G D+VLTTY
Sbjct: 233 SLVVAPTVALMQWKNEIEQHTK-GQLKIYIYHGASRTT-------DIKDLQGYDVVLTTY 284
Query: 561 DVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATEM 620
VL+ S ++ G RR K+ P++L I ++R+ LDEA ++ +
Sbjct: 285 AVLE---SVFRKQNYGFRRKNGLFKQ----PSVLHNIDFYRVILDEAHNIKDRQSNTARA 337
Query: 621 ALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS 657
L + RWC++GTP+Q ++ ++Y L+RFL +PF+
Sbjct: 338 VNNLKTQKRWCLSGTPLQNRIGEMYSLIRFLNINPFT 374
Score = 74 (31.1 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 359 GGILADEMGLGKTVELLACI 378
GG+LADEMG+GKT++ +A +
Sbjct: 205 GGVLADEMGMGKTIQTIALL 224
Score = 62 (26.9 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 686 KEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQS 725
K IM R +KV +D+L LPP+ V F+ E+ Y+S
Sbjct: 439 KNIMLRRTKVERADDLGLPPRIVTVRRDFFNEEEKDLYRS 478
Score = 37 (18.1 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 4/15 (26%), Positives = 10/15 (66%)
Query: 292 PYQRRAAYWMVQREK 306
P+Q +W++ +E+
Sbjct: 186 PFQLEGLHWLISQEE 200
>GENEDB_PFALCIPARUM|MAL13P1.216 [details] [associations]
symbol:MAL13P1.216 "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 Prosite:PS00518
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HSSP:P38398 EMBL:AL844509 KO:K15505 RefSeq:XP_001350155.1
ProteinModelPortal:Q8IDQ5 EnsemblProtists:MAL13P1.216:mRNA
GeneID:813773 KEGG:pfa:MAL13P1.216 EuPathDB:PlasmoDB:PF3D7_1343400
HOGENOM:HOG000283331 ProtClustDB:CLSZ2433454 Uniprot:Q8IDQ5
Length = 1446
Score = 179 (68.1 bits), Expect = 2.7e-19, Sum P(5) = 2.7e-19
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 585 KRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDL 644
K YP L I W RI +DEA ++++ + + +L + WC+TGTPIQ + D+
Sbjct: 872 KEYP-----LYNITWRRIIIDEAHVIKNKNSIQSVAVWKLRGERNWCLTGTPIQNSIFDI 926
Query: 645 YGLLRFLKSSPFSISRWWIEVIRDPYENGDVG-AMEFTHKFFKEIMCRSSKVHVSDE--- 700
+ L RFL P+ WW + I D + A++ K I+ R +K +
Sbjct: 927 FPLFRFLGIKPYGTIEWWNKEIVDYVNKNKLNLALDVVRKISSPILLRRTKKSKTKNGNS 986
Query: 701 -LQLPPQEECVSWLTFSPIEEHFYQS 725
+ LP + + L FS EE FY++
Sbjct: 987 IISLPKKNIHLEKLEFSLEEEDFYRA 1012
Score = 110 (43.8 bits), Expect = 2.7e-19, Sum P(5) = 2.7e-19
Identities = 30/78 (38%), Positives = 38/78 (48%)
Query: 488 LIEATDSPV--ATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIM 545
LIE T V G TL++ P ++ QW EI RHT+ G + IY G S+
Sbjct: 724 LIENTIKGVHFKRGGTLVIAPLALIYQWKEEIERHTKEGFVTCYIYYGTSKDISSE---- 779
Query: 546 DISELVGADIVLTTYDVL 563
EL G +VLTTY L
Sbjct: 780 ---ELSGYSVVLTTYSTL 794
Score = 90 (36.7 bits), Expect = 2.7e-19, Sum P(5) = 2.7e-19
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 338 FY-NPFSGSLSLS-PDYTSSYVFGGILADEMGLGKTVELLACI 378
FY N +G+ SL+ P + + GGILADEMGLGKT++ + I
Sbjct: 658 FYVNKLTGAFSLTYPQFVPPFR-GGILADEMGLGKTIQSIGLI 699
Score = 51 (23.0 bits), Expect = 2.7e-19, Sum P(5) = 2.7e-19
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 763 IITHAEAAKLLNSLLKLRQACCHP 786
+++H + +L LL+LRQ C HP
Sbjct: 1030 VLSHY--SHVLQLLLRLRQCCSHP 1051
Score = 46 (21.3 bits), Expect = 8.5e-19, Sum P(5) = 8.5e-19
Identities = 22/85 (25%), Positives = 41/85 (48%)
Query: 733 YAREVIQRLKD-NILKRNVPGHASSDALYNPIIT---HAEAAKLLNSLLKLRQA----C- 783
Y++E ++ LK+ N+++ + DA Y P+I+ H K + L Q C
Sbjct: 1151 YSKE-LEILKNGNVMQCCI---CLEDATY-PLISKCLHIMCKKCADDYFHLTQIADKKCP 1205
Query: 784 -CHPQVGSSGLRSLQQSPLSMDEIL 807
C + L++LQ++ +DE+L
Sbjct: 1206 QCDNYISLKSLKTLQENKSPLDELL 1230
Score = 38 (18.4 bits), Expect = 2.7e-19, Sum P(5) = 2.7e-19
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 291 RPYQRRAAYWMVQRE 305
+ YQ +WM RE
Sbjct: 462 KTYQAEGVWWMYTRE 476
Score = 37 (18.1 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 546 DISELVGADIVLTTYDVLKEDLSHD 570
D ++++ AD YD K ++ D
Sbjct: 211 DTNKIISADQKFVEYDKCKSEVLKD 235
>CGD|CAL0006085 [details] [associations]
symbol:RAD16 species:5476 "Candida albicans" [GO:0000113
"nucleotide-excision repair factor 4 complex" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0000715
"nucleotide-excision repair, DNA damage recognition" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 CGD:CAL0006085 Pfam:PF00097
Prosite:PS00518 GO:GO:0005524 EMBL:AACQ01000017 EMBL:AACQ01000015
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K15083
RefSeq:XP_721196.1 RefSeq:XP_721468.1 ProteinModelPortal:Q5AI84
STRING:Q5AI84 GeneID:3636874 GeneID:3637198 KEGG:cal:CaO19.10486
KEGG:cal:CaO19.2969 Uniprot:Q5AI84
Length = 852
Score = 236 (88.1 bits), Expect = 3.9e-19, Sum P(4) = 3.9e-19
Identities = 54/158 (34%), Positives = 87/158 (55%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G L++ P L QW EI +HT PG LK +Y G+ S+ SI ++S+ D++LT
Sbjct: 287 GPNLVIGPTVALMQWKNEIEKHTEPGMLKVLLYHGSNRSN----SIQELSQY---DVILT 339
Query: 559 TYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAAT 618
+Y VL+ S ++ G +R K I I ++R+ LDEA ++ + +
Sbjct: 340 SYSVLE---SVYRKQNYGFKRKNGLVKEKSAIHN----IEFYRVILDEAHNIKDRNSNTS 392
Query: 619 EMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
A +L K RWC+TGTP+Q ++ ++Y L+R++K PF
Sbjct: 393 RAAGKLNTKKRWCLTGTPLQNRIGEMYSLIRYMKLDPF 430
Score = 76 (31.8 bits), Expect = 3.9e-19, Sum P(4) = 3.9e-19
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 359 GGILADEMGLGKTVELLACIFAH 381
GGILADEMG+GKT++ + +F H
Sbjct: 261 GGILADEMGMGKTIQTIG-LFMH 282
Score = 56 (24.8 bits), Expect = 3.9e-19, Sum P(4) = 3.9e-19
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 688 IMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQS 725
+M R +K+ +D+L LPP+ + F+ E+ YQS
Sbjct: 498 VMLRRTKIERADDLGLPPRVVEIRRDFFNEEEKDLYQS 535
Score = 40 (19.1 bits), Expect = 3.9e-19, Sum P(4) = 3.9e-19
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 292 PYQRRAAYWMVQREKGD 308
P+Q W++++E G+
Sbjct: 242 PFQLEGLNWLIKQEDGE 258
>POMBASE|SPAC17A2.12 [details] [associations]
symbol:rrp1 "ATP-dependent DNA helicase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISM] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISM] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=ISM] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 PomBase:SPAC17A2.12
Prosite:PS00518 GO:GO:0005829 GO:GO:0005524 EMBL:CU329670
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006338
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004003
GO:GO:0000724 GO:GO:0004842 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0035861 GO:GO:0045005 OrthoDB:EOG4NZZ2M PIR:T37813
RefSeq:NP_594246.1 ProteinModelPortal:O13762 STRING:O13762
EnsemblFungi:SPAC17A2.12.1 GeneID:2542440 KEGG:spo:SPAC17A2.12
OMA:RIRDSEN NextBio:20803497 Uniprot:O13762
Length = 897
Score = 243 (90.6 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 89/315 (28%), Positives = 138/315 (43%)
Query: 488 LIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGS-LKTCIYEGARNSSLSDTSIMD 546
L + + P+ LIV +L QW E++ P L I+ G+ +L D
Sbjct: 291 LTQKSQDPLRK-TNLIVVSVALLHQWAEELSTKVHPSKKLSVYIHHGSTKKNL------D 343
Query: 547 ISELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDE 606
EL D+VLTTY +L ++ + D + P L T W+RI LDE
Sbjct: 344 SYELSQYDVVLTTYSMLAYEMKQN-DAFNNNNPATATPP--PACSLLETS--WYRIVLDE 398
Query: 607 AQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVI 666
A + + A + ++L AK+RWC++GTPIQ +D+ Y LL+FL+ P+ + + + I
Sbjct: 399 AHTIRNRDTLAAKCCVKLDAKYRWCLSGTPIQNHIDEFYSLLKFLRIKPYCVWSLFAKDI 458
Query: 667 RDPYENGDVGAMEFTHKFFKEIMC-----RSSKVHVSDE--LQLPPQEECVSWLTFSPIE 719
P ++ +E K + ++ R+ + V++ + LPP+ + P E
Sbjct: 459 SRPLKSYRADIVEAALKRLRILLASTVFRRTKETRVNNLPIVNLPPKTIRTVSVNLLPEE 518
Query: 720 EHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKL 779
Y Q + Q L DN + H S + LL SLL+L
Sbjct: 519 RALYNEQMSSA--------QSLVDNYFNND---HDLSRYGF-----------LLVSLLRL 556
Query: 780 RQACCHPQ-VGSSGL 793
RQ CCHP V SS L
Sbjct: 557 RQFCCHPWLVKSSSL 571
Score = 73 (30.8 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 359 GGILADEMGLGKTVELLACIFAHR 382
GG++AD+MGLGKT++ +A + +
Sbjct: 271 GGVMADDMGLGKTIQTIALLLTQK 294
>FB|FBgn0002542 [details] [associations]
symbol:lds "lodestar" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0006353 "DNA-dependent transcription,
termination" evidence=IDA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS;IDA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007143 "female
meiosis" evidence=IMP] [GO:0034454 "microtubule anchoring at
centrosome" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0007283 GO:GO:0007143 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034454 GO:GO:0008094 GO:GO:0006353
GeneTree:ENSGT00700000104545 EMBL:X62629 PIR:A40580
RefSeq:NP_524850.2 UniGene:Dm.20310 ProteinModelPortal:P34739
SMR:P34739 DIP:DIP-20026N IntAct:P34739 MINT:MINT-947822
STRING:P34739 PaxDb:P34739 EnsemblMetazoa:FBtr0081758 GeneID:45894
KEGG:dme:Dmel_CG2684 CTD:45894 FlyBase:FBgn0002542
InParanoid:P34739 KO:K15173 OMA:QRHALAW OrthoDB:EOG47M0D4
PhylomeDB:P34739 GenomeRNAi:45894 NextBio:838462 Bgee:P34739
GermOnline:CG2684 Uniprot:P34739
Length = 1061
Score = 179 (68.1 bits), Expect = 9.5e-19, Sum P(4) = 9.5e-19
Identities = 55/171 (32%), Positives = 84/171 (49%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W RI LDEA +V ++ + ++ L K+RW +TGTPIQ K D+Y LL+FL+ SPF
Sbjct: 597 WRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDD 656
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHV-SD-ELQ-LPPQEECVSWLTF 715
W + I +N G + K +M R +K + SD +L LP +E + ++
Sbjct: 657 LHTWKKWI----DNKSAGGQNRLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISL 712
Query: 716 SPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDA---LYNPI 763
E + YQ T + Y+R + + +R + SDA YN I
Sbjct: 713 DKEEMNVYQ----TVMTYSRTLFAQFLHQRAERETDFNYRSDANKPTYNQI 759
Score = 103 (41.3 bits), Expect = 9.5e-19, Sum P(4) = 9.5e-19
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G TL+VCPA +L QW++E+ L C++ G N + D DIV+T
Sbjct: 525 GGTLVVCPASLLRQWESEVESKVSRQKLTVCVHHG-NNRETKGKYLRDY------DIVVT 577
Query: 559 TYDVLKED 566
TY ++ +
Sbjct: 578 TYQIVARE 585
Score = 74 (31.1 bits), Expect = 9.5e-19, Sum P(4) = 9.5e-19
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 359 GGILADEMGLGKTVELLACIFA 380
GGILAD+MGLGKT+ +++ + A
Sbjct: 460 GGILADDMGLGKTLTMISSVLA 481
Score = 57 (25.1 bits), Expect = 9.5e-19, Sum P(4) = 9.5e-19
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 772 LLNSLLKLRQACCHP 786
+L LL+LRQ CCHP
Sbjct: 788 ILVLLLRLRQICCHP 802
>POMBASE|SPBC23E6.02 [details] [associations]
symbol:rrp2 "ATP-dependent DNA helicase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISM] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISM] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0045005 "maintenance of fidelity
involved in DNA-dependent DNA replication" evidence=IMP]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 PomBase:SPBC23E6.02 Prosite:PS00518
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006338 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004003 GO:GO:0000724 GO:GO:0004842
InterPro:IPR017907 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0045005
OrthoDB:EOG4NZZ2M PIR:T39936 RefSeq:NP_596602.1
ProteinModelPortal:O60177 STRING:O60177 EnsemblFungi:SPBC23E6.02.1
GeneID:2540464 KEGG:spo:SPBC23E6.02 OMA:ACCHSYL NextBio:20801591
Uniprot:O60177
Length = 1040
Score = 214 (80.4 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 67/235 (28%), Positives = 110/235 (46%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
TLI+ P +L QW EI P T +Y + S I + +L+ DIVLTTY
Sbjct: 443 TLIITPVSLLQQWHNEILTKIAPSHRPT-VY--IHHGSSKKHKIAE--QLMSYDIVLTTY 497
Query: 561 DVLKEDLSHDS--DRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAAT 618
+V+ + + D+ D + K++ +P W+R+ LDEAQ +++ A
Sbjct: 498 NVIAYEFKNKMAYDKSIEDNAPI---KKFEHLPFFEAE--WYRVILDEAQTIKNRNTLAA 552
Query: 619 EMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRD---PYE-NGD 674
L + +RWC++GTP+Q +++ Y L++FL+ P+S W +D P N +
Sbjct: 553 RGCCLLESTYRWCLSGTPMQNGVEEFYSLIKFLRIKPYSD---WSSFSKDFTIPLSSNIN 609
Query: 675 VGA-MEFTHKFFKEIMCR---SSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQS 725
A M+ K ++ R ++K+ L LPP+ S S E FY +
Sbjct: 610 TSAPMKRFRGLLKAVLLRRTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNT 664
Score = 81 (33.6 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPAS 386
GGILAD+MGLGKTV+ LA + R P S
Sbjct: 411 GGILADDMGLGKTVQALALLVT-RPPES 437
Score = 67 (28.6 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 763 IITHAEAAKLLNSLLKLRQACCHP 786
I TH LL LL+LRQACCHP
Sbjct: 682 ITTHY--GSLLVLLLRLRQACCHP 703
>UNIPROTKB|H7C5K0 [details] [associations]
symbol:HLTF "Helicase-like transcription factor"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 Prosite:PS00518 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 PROSITE:PS51192 HGNC:HGNC:11099 EMBL:AC021059
ProteinModelPortal:H7C5K0 Ensembl:ENST00000467858 Bgee:H7C5K0
Uniprot:H7C5K0
Length = 425
Score = 222 (83.2 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 50/135 (37%), Positives = 67/135 (49%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W R+ LDE + + A T+ L L ++ RW +TGTPIQ L DL+ LL FLK
Sbjct: 10 LHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLLSFLKL 69
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCR---SSKVHVSDELQLPPQEECV 710
PF WW I+ P GD G + K I R +SK+ L+LP ++ +
Sbjct: 70 KPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFI 129
Query: 711 SWLTFSPIEEHFYQS 725
+T S E YQS
Sbjct: 130 QHITLSDEERKIYQS 144
Score = 77 (32.2 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 726 QHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCH 785
QH T R++ Q +K+ G A+ +N A A +L LL+LRQ CCH
Sbjct: 130 QHITLSDEERKIYQSVKNE-------GRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 182
Query: 786 PQVGSSGLRSLQQSPLSM-----DEILMVLIGKTKI 816
+ ++ + S S S+ +E+ LI K K+
Sbjct: 183 TYLLTNAVSSNGPSAFSLGNDTPEELRKKLIRKMKL 218
>CGD|CAL0004569 [details] [associations]
symbol:orf19.2097 species:5476 "Candida albicans" [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0000403 "Y-form DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0000400 "four-way junction DNA binding"
evidence=IEA] [GO:0009650 "UV protection" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0010994 "free
ubiquitin chain polymerization" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR014905
Pfam:PF00176 Pfam:PF00271 Pfam:PF08797 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SMART:SM00910
CGD:CAL0004569 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000031 EMBL:AACQ01000030
RefSeq:XP_719543.1 RefSeq:XP_719667.1 ProteinModelPortal:Q5ACX1
STRING:Q5ACX1 GeneID:3638757 GeneID:3638827 KEGG:cal:CaO19.2097
KEGG:cal:CaO19.9644 KO:K15505 Uniprot:Q5ACX1
Length = 1084
Score = 205 (77.2 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 59/238 (24%), Positives = 103/238 (43%)
Query: 492 TDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTC-IYEGARNSSLSDTSIMDISEL 550
+D P A+ TLIV P +L QW +E + S C ++ G + S+ +
Sbjct: 490 SDRPYASQTTLIVVPMSLLFQWKSEFEKCNN-NSRHVCRLHYGEDQETNLAWSLCNPDNS 548
Query: 551 VGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMV 610
+++TTY + + + S R + P + + F RI LDE +
Sbjct: 549 KIPIVMITTYGTVLNEFTRLSKRRNS-------KGELPKVGLYSVKFF--RIILDEGHNI 599
Query: 611 ESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPY 670
+ + L + +W +TGTPI +LDDLY L +FL+ P++ +W + P+
Sbjct: 600 RNRNTKTAKSVYELQSSRKWILTGTPIVNRLDDLYSLTKFLELDPWNNFSYWKTFVTLPF 659
Query: 671 ENGDVG-AMEFTHKFFKEIMCR---SSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQ 724
E + ++ + I R S K + ++LP +E + + F+ EE YQ
Sbjct: 660 EQKKISQTLDVVKSILEPIFLRRTKSQKKNGKPLVELPAKEVVIEQIKFNDDEEKLYQ 717
Score = 103 (41.3 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 338 FY-NPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLACI 378
FY N ++G LSL S + GGILADEMGLGKT+ LA +
Sbjct: 436 FYANMYNGELSLEKPVIKSSLRGGILADEMGLGKTIATLALV 477
Score = 57 (25.1 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 40/207 (19%), Positives = 78/207 (37%)
Query: 177 TFSEDMSSLRVRVEILKSAFD-ACESLLENSRKTWKKSMINVMSWLRPEVLTSEARYGVS 235
+F++++ + +++ KS FD + ES E + + + ++ N+ L + L +
Sbjct: 249 SFAKNLDATENPIDLKKSNFDYSKESESEAALRLRQFAISNLFDRLAIKPL----KVNDD 304
Query: 236 KSMEMDVELMTRTKNDVSASQKHASFD-VARFYEAIKRSKA-EPMXXXXX---XXXXXXX 290
E D+ DV + D + FY++ + K E +
Sbjct: 305 TEDEEDISSQEINSGDVEHPVPEINLDQMKEFYQSNNQLKILEGLPETTTPPKENFALDL 364
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLF--YN-PFSGSLS 347
R YQ+ WM+ REK ++ L T + L+ Y P++ +
Sbjct: 365 RSYQKHGLSWMLAREKELDVLEMLSNEDKLSSQSRKELENLGTMNPLWRKYKWPYATEAT 424
Query: 348 LSP--DYTSSYVFGGILADEMGLGKTV 372
P + T Y + + E+ L K V
Sbjct: 425 QDPTQNQTEKYFYANMYNGELSLEKPV 451
Score = 54 (24.1 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 771 KLLNSLLKLRQACCH 785
++L +L+LRQ CCH
Sbjct: 742 QILTHILRLRQVCCH 756
>WB|WBGene00020742 [details] [associations]
symbol:T23H2.3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104545 KO:K15173 EMBL:FO081319
RefSeq:NP_001032980.2 ProteinModelPortal:P91494 PaxDb:P91494
EnsemblMetazoa:T23H2.3 GeneID:172347 KEGG:cel:CELE_T23H2.3
UCSC:T23H2.3 CTD:172347 WormBase:T23H2.3 HOGENOM:HOG000017261
InParanoid:P91494 OMA:GHNYTSI NextBio:875145 Uniprot:P91494
Length = 1001
Score = 240 (89.5 bits), Expect = 1.5e-17, Sum P(4) = 1.5e-17
Identities = 89/327 (27%), Positives = 140/327 (42%)
Query: 498 TGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVL 557
+ TLI+ PA ++ QW+AEI R L ++ G + ++ EL D+V+
Sbjct: 446 SNGTLIIAPASLIHQWEAEINRRLESDLLSVFMFHGTKKQRQ-----IEPKELARYDVVI 500
Query: 558 TTYDVLKEDLSHDS---DRHEGDRRFMRFQKRYPVIP-----TLLTRIFWWRICLDEAQM 609
TTY + +L + E D + P P + L R+ W R+ LDEA
Sbjct: 501 TTYTLAANELMEKKAAGSKKEEDSDDESENEENPRRPAGKNDSPLARVAWSRVILDEAHA 560
Query: 610 VESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDP 669
+++ + ++ RL + RWC++GTPI L DLY L+RFL+ F ++W E I P
Sbjct: 561 IKNRLSQCSKAVCRLSSFSRWCLSGTPIHNNLWDLYSLVRFLRIPLFGDRKFWAESIM-P 619
Query: 670 YENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQSQHET 729
+ G + K +M R +K D+ ++ V+ L IE H + +
Sbjct: 620 MKTGMADRVNL---LTKNLMLRRTK----DQQCALTNKKIVN-LKEKKIEIHELEMVGDE 671
Query: 730 CVGYA--REVIQRL-------KDNILK----RNVPGHASSDALYNPI----------ITH 766
GYA E Q+L D+I K R + D NP
Sbjct: 672 ANGYAIMMEAAQKLVKQIVTNTDDIQKYGQIRRRRQRGNDDEFANPYNVGPRNLAGNSNF 731
Query: 767 AEAAKLLNSLLKLRQACCHPQVGSSGL 793
+ +L L++LRQAC H + SG+
Sbjct: 732 QNMSCILLLLMRLRQACVHFHITKSGM 758
Score = 82 (33.9 bits), Expect = 1.5e-17, Sum P(4) = 1.5e-17
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPA 385
GGILAD+MGLGKT+ +L+ I H+K A
Sbjct: 393 GGILADDMGLGKTLSMLSLI-VHQKAA 418
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(4) = 1.5e-17
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 292 PYQRRAAYWMVQRE 305
P+Q+ W+V RE
Sbjct: 374 PHQKAGLRWLVWRE 387
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(4) = 1.5e-17
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 900 GCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDRK 955
G AFKI+ + D + ++ + + + +D T A+ SD E G + +++
Sbjct: 757 GMDLDAFKINGGDDEDADMKELENLMEKTMADLTIAD------SDNDEEGVDTNKE 806
>SGD|S000004237 [details] [associations]
symbol:IRC20 "Putative helicase" species:4932 "Saccharomyces
cerevisiae" [GO:0045003 "double-strand break repair via
synthesis-dependent strand annealing" evidence=IGI;IMP] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SGD:S000004237
Prosite:PS00518 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 EMBL:BK006945
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386 HSSP:Q9LRB7
EMBL:U20865 InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045003 PIR:S59393
RefSeq:NP_013348.1 ProteinModelPortal:Q06554 SMR:Q06554
DIP:DIP-6373N IntAct:Q06554 MINT:MINT-700566 STRING:Q06554
PaxDb:Q06554 EnsemblFungi:YLR247C GeneID:850949 KEGG:sce:YLR247C
CYGD:YLR247c GeneTree:ENSGT00700000104571 KO:K15710 OMA:HTWGVSG
OrthoDB:EOG4Q2HPM NextBio:967413 Genevestigator:Q06554
GermOnline:YLR247C Uniprot:Q06554
Length = 1556
Score = 213 (80.0 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 86/327 (26%), Positives = 155/327 (47%)
Query: 498 TGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMD--ISELVGADI 555
T TLI+CP IL QW EI H SLK Y G N + D +D + +L DI
Sbjct: 430 TKTTLIICPNAILKQWLEEIELHAN--SLKWYTYRGY-NEIMKDCKTVDEAVQQLCQYDI 486
Query: 556 VLTTYDVLKEDLSH-DSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNA 614
++T+Y+++ ++ H + +R RR + Y P L + + RI LDE QM+ S++
Sbjct: 487 IVTSYNIIATEVHHAEFNRSIRSRRLKSPKYDYSS-PLALMQFY--RIILDEVQMLRSSS 543
Query: 615 AAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGD 674
+ + L+ H W ++GTPIQ + + ++ +LK PF +I +++ + +
Sbjct: 544 TYSAKCTSLLHRIHTWGVSGTPIQN-IYNFRMIMSYLKLHPFCDEVDFIRTLQEEIKLRN 602
Query: 675 VGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEE-CVSWLTFSPIEEHFYQSQHETCVGY 733
A ++T F + + + D + + + + C+ + + QH +
Sbjct: 603 E-AKDYTSNDFV-CQLKGVRFSIKDCMNIFYRYDLCIRHSKANVASQIHIPRQHNFIIPL 660
Query: 734 AREVIQ-----RLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLL-KLRQACCH-- 785
I+ L +N L+ + G+ +SD +P +++A LN L +LR CCH
Sbjct: 661 EFAPIEWDNYLNLWNNFLE--LSGY-NSDGSGSPRVSNA----FLNEWLSRLRYICCHAL 713
Query: 786 -PQVGSSGLRSLQQ--SPLS-MDEILM 808
P++ S+ + L S +S +D+IL+
Sbjct: 714 FPEILSTRQKRLHGHLSRISNIDDILI 740
Score = 97 (39.2 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 339 YNPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFAHRKPASD-DSIFIDTAVQ 397
YN + LS DY G+LA+EMGLGKT+E+L+ I +R+ D ++ FID +
Sbjct: 369 YNQYRKE-RLSGDYP--VCAKGVLAEEMGLGKTIEILSLILLNRRKLKDSEATFIDDENR 425
Query: 398 VTDDQKVNL 406
K L
Sbjct: 426 TITKTKTTL 434
Score = 59 (25.8 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 36/166 (21%), Positives = 65/166 (39%)
Query: 213 SMINVMSW-LRPEVLTSEA-RYGVSKSMEMDVELMTRTKNDVSASQKHA----SFDVARF 266
S+ V+S+ L+ + L ++ R+ V + +D+ R +N+ KH+ +F +F
Sbjct: 202 SLTWVLSFNLKLKFLNNKFNRFSVEANQILDLTFSNRDENEFERYHKHSHIHSNFIQKQF 261
Query: 267 ------YEAIKRSKAEPMXXXXXXXXXXXXRPYQRRAAYWMVQREKGDXXXXXXXXXXXX 320
Y + SK +P P+QR + WM+ +E G
Sbjct: 262 ISQILEYSKDRLSKIKPFLPQSIPDLKVNLLPFQRESVEWMLIKE-GHGNSLSDTPTVID 320
Query: 321 XXPLCMPMDFLDTYSTLFYNPFSGSLS-LSPDYTSSYVFGGILADE 365
L +DF++ Y Y + S + P + + G IL E
Sbjct: 321 EVGL---IDFMNEYYAYGYELIARSPDEVGPSLLWNKLTGYILTTE 363
Score = 39 (18.8 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 397 QVTDDQKVNLRRLKRERVE 415
Q D KVNL +RE VE
Sbjct: 282 QSIPDLKVNLLPFQRESVE 300
>POMBASE|SPCC330.01c [details] [associations]
symbol:rhp16 "Rad16 homolog Rhp16" species:4896
"Schizosaccharomyces pombe" [GO:0000109 "nucleotide-excision repair
complex" evidence=IPI] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0006289 "nucleotide-excision repair" evidence=IGI] [GO:0006290
"pyrimidine dimer repair" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0034644 "cellular response to UV" evidence=IGI]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
PomBase:SPCC330.01c Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004003
GO:GO:0034644 GO:GO:0004842 InterPro:IPR017907 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006289 GO:GO:0000109
HOGENOM:HOG000179829 OrthoDB:EOG4Q5CXS EMBL:S83324 EMBL:AB027876
PIR:T41479 PIR:T52472 ProteinModelPortal:P79051 STRING:P79051
NextBio:20800041 Uniprot:P79051
Length = 861
Score = 186 (70.5 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 53/159 (33%), Positives = 82/159 (51%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDIS--ELVGADIVLT 558
TL+V P + QW EI HT +L T +Y G DIS EL D+VLT
Sbjct: 304 TLVVAPVVAIMQWKEEIDTHTNK-ALSTYLYYGQAR---------DISGEELSSYDVVLT 353
Query: 559 TYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAAT 618
+Y+V++ + +R G RR K +LL ++ ++RI LDEA ++S
Sbjct: 354 SYNVIES--VYRKER-SGFRRKNGVVKE----KSLLHQMEFYRIILDEAHGIKSRTCNTA 406
Query: 619 EMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS 657
L + C++GTP+Q ++ +L+ LLRFL++ PF+
Sbjct: 407 RAVCGLRTTRKICLSGTPLQNRIGELFSLLRFLRADPFA 445
Score = 78 (32.5 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPASDDSIFIDTAVQV 398
GGILADEMG+GKT++ +A + + +P ++ + V +
Sbjct: 276 GGILADEMGMGKTIQTIALLLS--EPRGKPTLVVAPVVAI 313
Score = 78 (32.5 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 670 YENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQS 725
YE A + H K IM R +K+ +D+L LPP+ V F+ EE YQS
Sbjct: 494 YEGPGKLAFKKVHSLLKHIMLRRTKLERADDLGLPPRVVEVRKDLFNEEEEDVYQS 549
Score = 45 (20.9 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 292 PYQRRAAYWMVQRE 305
P+QR YW+ ++E
Sbjct: 257 PFQREGVYWLKRQE 270
>DICTYBASE|DDB_G0282115 [details] [associations]
symbol:DDB_G0282115 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
dictyBase:DDB_G0282115 Pfam:PF00097 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000045 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 RefSeq:XP_640361.1
ProteinModelPortal:Q54SZ4 EnsemblProtists:DDB0233436 GeneID:8623416
KEGG:ddi:DDB_G0282115 InParanoid:Q54SZ4 OMA:DIVITTH
ProtClustDB:CLSZ2430494 Uniprot:Q54SZ4
Length = 1640
Score = 260 (96.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 78/256 (30%), Positives = 126/256 (49%)
Query: 500 ATLIVCPAPILAQWDAEITRHTRP---GSLKTCIYEGA-RNSSLSDTSIMDISELVGADI 555
ATLI+CP +++QW +EI +H +P L+ Y GA R LS +D++ + DI
Sbjct: 1045 ATLIICPPSLVSQWKSEIKKHLKPDYFNKLEIFEYHGANRKKKLSG---VDLNLM---DI 1098
Query: 556 VLTTYDVLK-EDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNA 614
V+TT++ E ++ D +P LLT I WWR+ +DE+Q+ +
Sbjct: 1099 VITTHNTFGIEFKKYEEDMQSAYTNNANGNDGSIPLPALLT-IHWWRVIIDESQVCKIKT 1157
Query: 615 AAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSIS-RWWIEVIRDPYENG 673
+ L A H+WC++GTPI LDD+Y L FL P + + W ++I P +N
Sbjct: 1158 LIFKGLQ-NLDAIHKWCLSGTPISNYLDDIYPSLHFLNCYPIAQDLKTWRKLIDRP-KN- 1214
Query: 674 DVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQSQHETCVGY 733
+E K I+ R K + D +LP + + + +L F+ E Y +T
Sbjct: 1215 ----LELLKKVINPILLRREKSEILD-FKLPKKNKEIVYLDFNENEADDY----DTLFSV 1265
Query: 734 AREVIQRL--KDNILK 747
A+E +Q++ + ILK
Sbjct: 1266 AQETLQKISCRGGILK 1281
Score = 42 (19.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 770 AKLLNSLLKLRQACCH 785
A +L LL+LRQ C H
Sbjct: 1284 ATVLALLLRLRQCCDH 1299
>ASPGD|ASPL0000030172 [details] [associations]
symbol:AN5483 species:162425 "Emericella nidulans"
[GO:0045005 "maintenance of fidelity involved in DNA-dependent DNA
replication" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:BN001305 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACD01000094 OrthoDB:EOG4NZZ2M
RefSeq:XP_663087.1 ProteinModelPortal:Q5B1U7
EnsemblFungi:CADANIAT00003605 GeneID:2871773 KEGG:ani:AN5483.2
HOGENOM:HOG000216663 OMA:LETIRPD Uniprot:Q5B1U7
Length = 1184
Score = 218 (81.8 bits), Expect = 2.6e-15, Sum P(4) = 2.6e-15
Identities = 80/301 (26%), Positives = 139/301 (46%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGS-LKTCIYEGARNSSLSDTSIMDISELVGADIVLTT 559
TLI+ P ++ QW EI + PG L+ I G + TS D+ + D+VLTT
Sbjct: 524 TLIIAPVALMQQWKREIEKMLSPGHRLQVYILHGDKGR----TSFSDLKKY---DVVLTT 576
Query: 560 YDVLKEDLS----HDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAA 615
+ +L +L ++ +G ++ +P L W+R+ +DEAQ +++ A
Sbjct: 577 FGMLASELKRVIKYEQLLKDGAEEPTLTRQYLKTLPCLGPTSKWYRVIIDEAQCIKNRAT 636
Query: 616 AATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS-ISRW---WIEVIRDPYE 671
+ RL +RWC++GTP+ +++L+ LL+FL+ P++ + R+ + ++ +
Sbjct: 637 QSAIACCRLNTTYRWCMSGTPMMNNVEELHSLLKFLRIRPYANLDRFKRDFSAPLKTNNK 696
Query: 672 NGDVGAMEFTHKFFKEIMCRS---SKVHVSDELQLPPQEECVSWLTFSPIEEHFYQSQHE 728
+ AM K ++ R SK+ +PP+ FS + H S+ E
Sbjct: 697 HLQEKAMTQLRILLKAVLLRRTKHSKIDGKPIFDIPPR--------FSE-KVHAVFSEDE 747
Query: 729 TCVGYAREVIQRLKDN-ILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCHPQ 787
+ A E +L+ N L+ G S+ L +L LL+LRQACCHP
Sbjct: 748 LELYKALEAKTQLQFNRYLEAGTVGRNYSNIL------------VL--LLRLRQACCHPH 793
Query: 788 V 788
+
Sbjct: 794 L 794
Score = 82 (33.9 bits), Expect = 2.6e-15, Sum P(4) = 2.6e-15
Identities = 16/29 (55%), Positives = 24/29 (82%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPASD 387
GGILAD+MGLGKT++ +A + + +P+SD
Sbjct: 492 GGILADDMGLGKTIQAIALMVS--RPSSD 518
Score = 42 (19.8 bits), Expect = 2.6e-15, Sum P(4) = 2.6e-15
Identities = 12/62 (19%), Positives = 23/62 (37%)
Query: 294 QRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSPDYT 353
QRRA W+ +R++ + P + ++ P +L P ++
Sbjct: 199 QRRAEQWLKERKEQERRDAEFARHLMSASPSAQTLSYISRAEPP--TPTRENLPSIPQFS 256
Query: 354 SS 355
SS
Sbjct: 257 SS 258
Score = 39 (18.8 bits), Expect = 5.2e-15, Sum P(4) = 5.2e-15
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 223 PEVLTSEARYGVSKSMEMDVELMTRTKNDVSASQKHASFDVARFYEAIKRSKAE 276
P+ + E + + +++ D +L + + A+ K+ D + A RSK E
Sbjct: 435 PKQINQEIKQ-LLETIRPDADLSAKDREGTPAALKYPLLDHQKLGLAWMRSKEE 487
Score = 37 (18.1 bits), Expect = 2.6e-15, Sum P(4) = 2.6e-15
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 924 VSREENSDFTDAEDPSGHLSDLSENGFNGD 953
+ + + D TD D LSD N + D
Sbjct: 921 IKEDGDRDDTDDSDEGATLSDFISNDSDCD 950
>UNIPROTKB|G4MPA7 [details] [associations]
symbol:MGG_07014 "DNA repair protein RAD16" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 Pfam:PF00097
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
EMBL:CM001231 InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K15083 RefSeq:XP_003709772.1
ProteinModelPortal:G4MPA7 EnsemblFungi:MGG_07014T0 GeneID:2685187
KEGG:mgr:MGG_07014 Uniprot:G4MPA7
Length = 986
Score = 217 (81.4 bits), Expect = 8.1e-15, Sum P(4) = 8.1e-15
Identities = 54/166 (32%), Positives = 91/166 (54%)
Query: 492 TDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELV 551
+D P A +L++ P L QW +EI +T G+LKT +Y G+ + T M +EL
Sbjct: 425 SDWP-AKKPSLVLAPPVALMQWMSEIQSYTE-GTLKTIVYHGSN----AKTKKMTKAELK 478
Query: 552 GADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVE 611
G D+++ +Y+ L+ S + + +G + K +LL I + R+ LDEA ++
Sbjct: 479 GYDVIIMSYNSLQ---SMYAKQEKGVSKKDGIYKE----KSLLHSIDFHRVILDEAHYIK 531
Query: 612 SNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS 657
S ++ L L +RWC+TGTP+Q ++ + + L+RFLK PF+
Sbjct: 532 SRTTMTSKACLALKTTYRWCLTGTPLQNRIGEFFSLVRFLKIEPFA 577
Score = 72 (30.4 bits), Expect = 8.1e-15, Sum P(4) = 8.1e-15
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPASDDSIFI 392
GG+L DEMGLGKT++ ++ + + PA S+ +
Sbjct: 404 GGLLGDEMGLGKTIQAVSLVMSDW-PAKKPSLVL 436
Score = 41 (19.5 bits), Expect = 8.1e-15, Sum P(4) = 8.1e-15
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 687 EIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEE 720
+IM R K D ++LP +E + F +E+
Sbjct: 643 KIMLRRQKKDHMDSMELPLKEIIIDRQFFGEVEK 676
Score = 40 (19.1 bits), Expect = 8.1e-15, Sum P(4) = 8.1e-15
Identities = 11/62 (17%), Positives = 25/62 (40%)
Query: 245 MTRTKNDVSASQKHASFDVARFYEAIKRSKAEPMXXXXXXXXXXXXRPYQRRAAYWMVQR 304
MTR + D + +K+ + + + ++ +P +P+Q + WM
Sbjct: 338 MTREERDRAKLEKNHPYLKTLWADFEAKAVVDPPPASQPTNISRNLKPFQLQGLAWMKAM 397
Query: 305 EK 306
E+
Sbjct: 398 EQ 399
Score = 37 (18.1 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 753 HAS--SDALYNPIITHAEAAKLLNSLLKLR 780
H S + L NPI T+ K + KLR
Sbjct: 609 HVSVFNQELLNPIQTYGRTLKGAEAFRKLR 638
>GENEDB_PFALCIPARUM|PFL2440w [details] [associations]
symbol:PFL2440w "DNA repair protein rhp16,
putative" species:5833 "Plasmodium falciparum" [GO:0006289
"nucleotide-excision repair" evidence=ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001510 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00645 Pfam:PF13639 PROSITE:PS50064
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 EMBL:AE014188 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006289 KO:K15083 RefSeq:XP_001350892.1
ProteinModelPortal:Q8I4S6 IntAct:Q8I4S6 MINT:MINT-1665888
EnsemblProtists:PFL2440w:mRNA GeneID:811540 KEGG:pfa:PFL2440w
EuPathDB:PlasmoDB:PF3D7_1250800 HOGENOM:HOG000283588 OMA:KKQLVFD
ProtClustDB:CLSZ2514966 Uniprot:Q8I4S6
Length = 1647
Score = 150 (57.9 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 26/65 (40%), Positives = 44/65 (67%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYA-KHRWCITGTPIQRKLDDLYGLLRFLK 652
L +I+W RI LDEA +++ + T+ L L +RWC+TGTP+Q ++ +LY L+RF++
Sbjct: 1030 LHQIYWNRIILDEAHRIKNRNTSTTQSILNLKCCGYRWCLTGTPLQNRISELYSLIRFIE 1089
Query: 653 SSPFS 657
P++
Sbjct: 1090 FYPYA 1094
Score = 95 (38.5 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G TLI+ P + QW +EI + L +Y G NS + I D EL+ DIV+T
Sbjct: 441 GQTLIIAPVAAVMQWKSEIEKFVDENILNVYVYHG--NSKI----ISD-EELIKYDIVIT 493
Query: 559 TYDVLKEDLSHDSDRHE 575
+Y V++ + ++H+
Sbjct: 494 SYAVVEVNFRKIVNKHK 510
Score = 78 (32.5 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 355 SYVFGGILADEMGLGKTVELLACIFAHR 382
S V GGILADEMG+GKT++ + I +
Sbjct: 243 SNVKGGILADEMGMGKTIQAITLILCQK 270
Score = 50 (22.7 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 717 PIEEHFYQSQHETCVGYAR-EVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKL 772
PI+ Y+ + + + Y + EV+ D IL R G SD P+I KL
Sbjct: 1139 PIQSFGYRGEGLSGMSYLKNEVL----DKILLRRTKGERKSDINLKPLIIKIRKDKL 1191
Score = 45 (20.9 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 293 YQRRAAYWMVQRE 305
YQ+ YWM+ +E
Sbjct: 229 YQKEGIYWMINQE 241
Score = 38 (18.4 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 770 AKLLNSLLKLRQACCHP 786
A + + L +LRQA HP
Sbjct: 1224 AHIFDLLSRLRQAADHP 1240
Score = 38 (18.4 bits), Expect = 3.9e-08, Sum P(6) = 3.9e-08
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 390 IFI-DTAVQVTDDQKVNLRRLK 410
I++ +T +Q T+ +K+N+ LK
Sbjct: 740 IYVTNTTIQNTELEKLNMGELK 761
>UNIPROTKB|Q8I4S6 [details] [associations]
symbol:PFL2440w "DNA repair protein rhp16, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006289
"nucleotide-excision repair" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001510 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00645 Pfam:PF13639 PROSITE:PS50064
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 EMBL:AE014188 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006289 KO:K15083 RefSeq:XP_001350892.1
ProteinModelPortal:Q8I4S6 IntAct:Q8I4S6 MINT:MINT-1665888
EnsemblProtists:PFL2440w:mRNA GeneID:811540 KEGG:pfa:PFL2440w
EuPathDB:PlasmoDB:PF3D7_1250800 HOGENOM:HOG000283588 OMA:KKQLVFD
ProtClustDB:CLSZ2514966 Uniprot:Q8I4S6
Length = 1647
Score = 150 (57.9 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 26/65 (40%), Positives = 44/65 (67%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYA-KHRWCITGTPIQRKLDDLYGLLRFLK 652
L +I+W RI LDEA +++ + T+ L L +RWC+TGTP+Q ++ +LY L+RF++
Sbjct: 1030 LHQIYWNRIILDEAHRIKNRNTSTTQSILNLKCCGYRWCLTGTPLQNRISELYSLIRFIE 1089
Query: 653 SSPFS 657
P++
Sbjct: 1090 FYPYA 1094
Score = 95 (38.5 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G TLI+ P + QW +EI + L +Y G NS + I D EL+ DIV+T
Sbjct: 441 GQTLIIAPVAAVMQWKSEIEKFVDENILNVYVYHG--NSKI----ISD-EELIKYDIVIT 493
Query: 559 TYDVLKEDLSHDSDRHE 575
+Y V++ + ++H+
Sbjct: 494 SYAVVEVNFRKIVNKHK 510
Score = 78 (32.5 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 355 SYVFGGILADEMGLGKTVELLACIFAHR 382
S V GGILADEMG+GKT++ + I +
Sbjct: 243 SNVKGGILADEMGMGKTIQAITLILCQK 270
Score = 50 (22.7 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 717 PIEEHFYQSQHETCVGYAR-EVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKL 772
PI+ Y+ + + + Y + EV+ D IL R G SD P+I KL
Sbjct: 1139 PIQSFGYRGEGLSGMSYLKNEVL----DKILLRRTKGERKSDINLKPLIIKIRKDKL 1191
Score = 45 (20.9 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 293 YQRRAAYWMVQRE 305
YQ+ YWM+ +E
Sbjct: 229 YQKEGIYWMINQE 241
Score = 38 (18.4 bits), Expect = 1.5e-13, Sum P(6) = 1.5e-13
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 770 AKLLNSLLKLRQACCHP 786
A + + L +LRQA HP
Sbjct: 1224 AHIFDLLSRLRQAADHP 1240
Score = 38 (18.4 bits), Expect = 3.9e-08, Sum P(6) = 3.9e-08
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 390 IFI-DTAVQVTDDQKVNLRRLK 410
I++ +T +Q T+ +K+N+ LK
Sbjct: 740 IYVTNTTIQNTELEKLNMGELK 761
>SGD|S000005717 [details] [associations]
symbol:ULS1 "Protein involved in proteolytic control of
sumoylated substrates" species:4932 "Saccharomyces cerevisiae"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0007533 "mating type switching" evidence=IMP]
[GO:0006333 "chromatin assembly or disassembly"
evidence=IGI;IMP;IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IPI] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089
PROSITE:PS51194 SMART:SM00184 SMART:SM00490 SGD:S000005717
Prosite:PS00518 GO:GO:0005739 GO:GO:0005524 GO:GO:0005730
EMBL:BK006948 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008094 GO:GO:0007533 GeneTree:ENSGT00700000104545
EMBL:Z75099 PIR:S67083 RefSeq:NP_014834.1 ProteinModelPortal:Q08562
SMR:Q08562 DIP:DIP-996N IntAct:Q08562 MINT:MINT-426553
STRING:Q08562 PaxDb:Q08562 EnsemblFungi:YOR191W GeneID:854363
KEGG:sce:YOR191W CYGD:YOR191w HOGENOM:HOG000065999 OMA:NENMNMS
OrthoDB:EOG4NZZ2M NextBio:976476 Genevestigator:Q08562
GermOnline:YOR191W Uniprot:Q08562
Length = 1619
Score = 198 (74.8 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 92/377 (24%), Positives = 157/377 (41%)
Query: 502 LIVCPAPILAQWDAEI-TRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
LIV P +L W E+ T+ + T I+ G+ N + +L D VL +Y
Sbjct: 997 LIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWR-----DLARYDAVLVSY 1051
Query: 561 DVLKEDLS-HDSDRHEGDRRFMRFQKRYPVIPTLLTR------IF-----WWRICLDEAQ 608
L + H + +G++ + + L T F ++RI LDE Q
Sbjct: 1052 QTLANEFKKHWPKKLDGEQNQLPAVPHIQALNRLKTSNEYYSPFFCNDSTFYRILLDEGQ 1111
Query: 609 MVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF--------SISR 660
+++ A++ + +RW ++GTPIQ +D+LY L+RFL+ P+ I R
Sbjct: 1112 NIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGR 1171
Query: 661 WWIEVIRDPYENGD-VGAMEFTHKFFKEIMCRSSKVHVSDE---LQLPPQEECVSWLTFS 716
++ + Y+N D A+ IM R SK D L+LPP+ V
Sbjct: 1172 FFQRNKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLELPPKIVEVDESRLK 1231
Query: 717 PIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSL 776
E FY + Q L +L + G SS +L L
Sbjct: 1232 GEELKFYTALESKN--------QALAKKLLNNSTRGSYSS---------------VLTLL 1268
Query: 777 LKLRQACCHPQVGSSGLRSLQQSPLSM-----DEILMVLIGKTKIEGEEALRKLVMALNG 831
L+LRQACCH ++ G + + + ++ D+ L + T + GE A +++ ++N
Sbjct: 1269 LRLRQACCHSELVVMGEKKAEGTKVANGKSFEDDWLRLYYKITHMSGE-AQAQVITSMNS 1327
Query: 832 LAGIALIEKNLSQAVSL 848
+ +E+ +A+S+
Sbjct: 1328 MTCFWCMEQLEPEAMSV 1344
Score = 83 (34.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPAS 386
GG+LAD+MGLGKT++ +A + A+R S
Sbjct: 964 GGLLADDMGLGKTIQAIALMLANRSEES 991
Score = 42 (19.8 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 41 EELADVDHPFFVEVNR---TCWLLDEHLDISEIVLTDLKLREEF--SGFIISEDFYQV 93
EEL + F V ++ + W + E+ + + DL +++EF S +ED Q+
Sbjct: 858 EELLQQSYLFPVNADQRPPSNWNIVENTEDTSSTANDLSMQDEFHISNMHAAEDQEQI 915
Score = 39 (18.8 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 182 MSSLRVRVEILKSAFDACESLLENSRKTWK 211
++ L+ + ++ KS D+ + N + WK
Sbjct: 552 LNKLKEKRQLTKSKLDSINLKMYNYNEQWK 581
>ASPGD|ASPL0000008250 [details] [associations]
symbol:AN10794 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:BN001301 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EnsemblFungi:CADANIAT00006774
OMA:LADMMGL Uniprot:C8V1S3
Length = 1170
Score = 197 (74.4 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 58/202 (28%), Positives = 95/202 (47%)
Query: 526 LKTCIYEGARNSSL--SDTSIMDISELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRF 583
+K + +GA S + + + EL D+V+TTY ++ +LS R G
Sbjct: 602 VKEHLRDGALTSYVFHGSSRTTSVDELSKYDLVITTYSIVLSELSGRGSRRAGSS----- 656
Query: 584 QKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDD 643
P LT++ +RI LDEA + +AA T+ RL A+ RW +TGTPIQ +LDD
Sbjct: 657 -------P--LTKMNMFRIVLDEAHTIREQSAAQTQAIFRLNAQRRWSVTGTPIQNRLDD 707
Query: 644 LYGLLRFLKSSPFSI-SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQ 702
L + +FL P+ SR+ + ++ ++ GD + R V D++
Sbjct: 708 LLSVTKFLGIYPYDDRSRFNMHIL-SRFKTGDATVLASLRVLVDSFTLR----RVKDKID 762
Query: 703 LPPQEECVSWLTFSPIEEHFYQ 724
LP + + + L FS E ++
Sbjct: 763 LPARHDKIVMLEFSESEAQLHE 784
Score = 69 (29.3 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPASD 387
GG+LAD MGLGKT+ +L+ + + A +
Sbjct: 535 GGLLADMMGLGKTLSILSLVISSLAQAQE 563
>DICTYBASE|DDB_G0281949 [details] [associations]
symbol:helE "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
dictyBase:DDB_G0281949 Prosite:PS00518 GO:GO:0005524
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 EMBL:AAFI02000044 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
ProtClustDB:CLSZ2430494 RefSeq:XP_640427.1
ProteinModelPortal:Q54T24 EnsemblProtists:DDB0215339 GeneID:8623380
KEGG:ddi:DDB_G0281949 InParanoid:Q54T24 OMA:NSFCDKI Uniprot:Q54T24
Length = 1540
Score = 183 (69.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 62/241 (25%), Positives = 110/241 (45%)
Query: 510 LAQWDAEITRHTRPGSLKTCIYEGAR---NSSLSDTSIMDISELVGADIVLTTYDVLKED 566
L + D T H + S++ YE R +SS TS++ I L+ D+++TT
Sbjct: 761 LIKADFVFTTH-QTFSIEYSFYEKERKNKSSSAISTSLIPIP-LINEDVIITTTTTTTTT 818
Query: 567 LSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATEMALRLYA 626
++++ + +++ + ++ +IP L I WWR+ +DE+ + + + L +
Sbjct: 819 TNNNNSNNNNNQK--QISSKFTIIPPPLLCIHWWRVIIDESHKFKHKSLFFRSLQ-NLDS 875
Query: 627 KHRWCITGTPIQRKLDDLYGLLRFLKSSPFS--ISRW--WIEVIRDPYENGDVGAMEFTH 682
+RWC+TGTP Q DL+ +L FL P + I+ W +E I+D E +
Sbjct: 876 VNRWCLTGTPYQNNCTDLFPMLYFLNVFPIAKNIATWRKLVESIQDQSEKKKI-----LK 930
Query: 683 KFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQSQHETCVGYAREVIQRLK 742
K+ I+ SK V + Q EE + L F E Y + + E +R++
Sbjct: 931 KYLNPIILSRSKKDVRIQ-QNQVYEEIIE-LEFDQNESDAYSLVFKD----SNETFERIQ 984
Query: 743 D 743
D
Sbjct: 985 D 985
Score = 80 (33.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 336 TLFYNPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLA 376
T +YN F +++ + GG+L D+MGLGKT+ +L+
Sbjct: 615 TFYYNSFCDKITMFEPKGRKSISGGMLCDKMGLGKTLMILS 655
Score = 41 (19.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 346 LSLSPDYTSSYVF 358
+S PD+TSS +F
Sbjct: 28 ISTQPDFTSSNIF 40
>UNIPROTKB|G4NIT2 [details] [associations]
symbol:MGG_12155 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00490 Prosite:PS00518 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 EMBL:CM001236 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_003719705.1 ProteinModelPortal:G4NIT2
EnsemblFungi:MGG_12155T0 GeneID:2677543 KEGG:mgr:MGG_12155
Uniprot:G4NIT2
Length = 1430
Score = 165 (63.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD-IVL 557
G TLIV PA + QW +E+ +H C + R SD + I E++ + +V+
Sbjct: 572 GPTLIVAPAAAIEQWKSELKKH--------CTF-AKRIWHYSDKNENQIPEVLKKEKVVI 622
Query: 558 TTYDVLKEDLSHDSD--RHEGDRRFM---RFQKRYPVIPTLLTRIFWWRICLDEAQMVES 612
+Y + + D R G + + R Q + L + W R+ LDEA +++
Sbjct: 623 ASYQAIAKAFPSDEALRRINGTKLGLEAWREQLTEKMGDAFL--VDWHRVVLDEAHAIKN 680
Query: 613 NAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLK 652
+ + ++ + L +KHRW ++GTPI +++LY +RFL+
Sbjct: 681 HLSRTSKACVHLRSKHRWALSGTPIHNTIEELYPYMRFLR 720
Score = 94 (38.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 337 LFYNPFSG-SLSLSPDYTSSYVFGGILADEMGLGKTVELLACI 378
LF + G L +++ +GGILAD+MGLGKTV++LAC+
Sbjct: 523 LFNHQLVGVHFMLGKEFSPLGPYGGILADQMGLGKTVQMLACM 565
>FB|FBgn0037531 [details] [associations]
symbol:CG10445 species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000381
GeneTree:ENSGT00700000104545 FlyBase:FBgn0037531 GenomeRNAi:40938
NextBio:821377 RefSeq:NP_001246974.1 RefSeq:NP_649751.2
UniGene:Dm.24034 ProteinModelPortal:Q9VHY2 IntAct:Q9VHY2
EnsemblMetazoa:FBtr0300685 EnsemblMetazoa:FBtr0304704 GeneID:40938
KEGG:dme:Dmel_CG10445 UCSC:CG10445-RA InParanoid:Q9VHY2 OMA:NLNVANH
OrthoDB:EOG40ZPCJ Bgee:Q9VHY2 Uniprot:Q9VHY2
Length = 945
Score = 122 (48.0 bits), Expect = 9.4e-12, Sum P(4) = 9.4e-12
Identities = 50/192 (26%), Positives = 83/192 (43%)
Query: 585 KRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDL 644
KRY L ++W R+ LDEA ++ ++ +L A W +TGTP+Q + D+
Sbjct: 433 KRYGNTSPLFA-VYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDV 491
Query: 645 YGLLRFLKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSK--VHVSDELQ 702
+ LLRF+ F + W + + + +G K +M R +K + S ++
Sbjct: 492 FALLRFVNVPNFQDLQQWKKNLNESM----LGHRRLNF-IIKPLMLRRTKQKLQASGDMP 546
Query: 703 -LPPQEECVSWLTFSPIEEHFYQSQHETCVG-YAREVIQRLKDNI------LKRN---VP 751
LP + + + S E YQ + + ++QR K N L+R +
Sbjct: 547 ALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQREKGNSDLNYYSLERTPQFIA 606
Query: 752 GHASSDALYNPI 763
GH S D YN I
Sbjct: 607 GHMS-DERYNEI 617
Score = 80 (33.2 bits), Expect = 9.4e-12, Sum P(4) = 9.4e-12
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 357 VFGGILADEMGLGKTVELLACIFA 380
+ GGILAD+MGLGKT+ ++A I A
Sbjct: 228 ISGGILADDMGLGKTLSMIALILA 251
Score = 76 (31.8 bits), Expect = 9.4e-12, Sum P(4) = 9.4e-12
Identities = 15/67 (22%), Positives = 31/67 (46%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
TL+VCP ++ QW E+ +++ + G + I D+V+T+Y
Sbjct: 372 TLVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHEIG------IEAFRSYDLVITSY 425
Query: 561 DVLKEDL 567
+++ +L
Sbjct: 426 NLVVNEL 432
Score = 66 (28.3 bits), Expect = 9.4e-12, Sum P(4) = 9.4e-12
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 772 LLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGE 819
+L LL+LRQ CCHP + LR L+ +++ V + + +EG+
Sbjct: 638 ILVLLLRLRQFCCHPGLMIGMLRGA----LTAEDVQNVKVDASDVEGQ 681
>ASPGD|ASPL0000049992 [details] [associations]
symbol:AN2256 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K15711 HOGENOM:HOG000172619
EMBL:AACD01000037 RefSeq:XP_659860.1 ProteinModelPortal:Q5BB24
EnsemblFungi:CADANIAT00008948 GeneID:2874756 KEGG:ani:AN2256.2
OMA:IVGVRYY OrthoDB:EOG4G1QQQ Uniprot:Q5BB24
Length = 972
Score = 115 (45.5 bits), Expect = 4.5e-10, Sum P(4) = 4.5e-10
Identities = 37/131 (28%), Positives = 52/131 (39%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLK- 652
L + W R+ LDE + + + A L A RW +TGTPI L DLY +RFL
Sbjct: 515 LFSVKWRRVVLDEGHTIRNPRSKGFSAACALRADSRWALTGTPIVNTLKDLYSQIRFLGL 574
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
+ + V+ P + D + I R K L+LP V
Sbjct: 575 TGGLEDFAVFNSVLIRPLMSDDPDSRLLLQALMSTICLRRRKDMGFVNLRLPTLTSRVLR 634
Query: 713 LTFSPIEEHFY 723
+ F P E+ Y
Sbjct: 635 IKFHPHEKEKY 645
Score = 93 (37.8 bits), Expect = 4.5e-10, Sum P(4) = 4.5e-10
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 340 NPFSG-SLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFAHRKPASDDS 389
N F+ + + S S GGILAD+MGLGKT+++++ I ++ +P + +S
Sbjct: 390 NKFTNIATNFSTTAPPSLASGGILADDMGLGKTIQIISLILSNSQPKTKES 440
Score = 73 (30.8 bits), Expect = 4.5e-10, Sum P(4) = 4.5e-10
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 500 ATLIVCPAPILAQWDAEITRHTRPGSL-KTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
ATLI+ P I++ W +I HT P + IY G D ++ D+V+T
Sbjct: 443 ATLIISPVGIMSNWRNQIQEHTNPEQAPRVLIYHGPGRKE--DANLDHY------DVVVT 494
Query: 559 TYDVLKEDLSHDS 571
+Y L + +S
Sbjct: 495 SYGTLATEYKTES 507
Score = 47 (21.6 bits), Expect = 4.5e-10, Sum P(4) = 4.5e-10
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 772 LLNSLLKLRQACCHPQVGSSGLRSL-------QQSPLSMDEI--LMVLIGKTKIEGEE 820
LL +L+LRQ C H + + L L Q PL+ D I L ++ + +IE +E
Sbjct: 672 LLEVILRLRQVCNHWALAKNRLDKLAAILDKHQTVPLTPDNIKALQDML-QIRIESQE 728
>CGD|CAL0000073 [details] [associations]
symbol:orf19.1667 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
PROSITE:PS51194 CGD:CAL0000073 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 RefSeq:XP_721625.1
RefSeq:XP_721744.1 ProteinModelPortal:Q5AJC4 GeneID:3636587
GeneID:3636769 KEGG:cal:CaO19.1667 KEGG:cal:CaO19.9236
Uniprot:Q5AJC4
Length = 1250
Score = 182 (69.1 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 72/317 (22%), Positives = 137/317 (43%)
Query: 335 STLFYNPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFAHRKPAS---DDSIF 391
S +++ F+ + L D S GGIL + MGLGKT+ L+ I + + D+
Sbjct: 342 SNFYFDLFTKRIYLHAD-VMSLPLGGILGENMGLGKTLMCLSLINLTKYEITKIPSDNFL 400
Query: 392 IDTAVQVTDDQKVNLRRLKRERVECICGAVSESRKYKGLWVQCDI-CDAWQHAD--CVGY 448
+ +++ D+ K L + RE++ + S +K + + + +H C+
Sbjct: 401 LYNEIEIHDEIKT-LTEICREKI------IHSSIPWKLYNLPTSVTANLAKHPGYFCIDL 453
Query: 449 SPRGKKRRSTFELKKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPVA----TGATLIV 504
+ K +RS H K ++ R+G C+ + + TLI+
Sbjct: 454 NDHEKNKRS------H--KSGF--LINRNGVDTCKRASRTTGTKSTSYLKLYMSSTTLII 503
Query: 505 CPAPILAQWDAEITRHTRPGSLKT-CIYEGARNSSLSDTSIMD---ISELVGADIVLTTY 560
P + QW EI H P LK C ++ + D + + ++ + + + L Y
Sbjct: 504 VPDNLFIQWVDEIAHHVEPNFLKILCAANYIKSDQIKDQFLPNPKFVNTIPESPVELIEY 563
Query: 561 DVLKEDLSHDSDRHEGDRRFMRFQKR-YPVIPTLLTRIFWWRICLDEAQMVESNAAAATE 619
DV+ S + R QK +P+L +++W R+ +DE +V+S + A +
Sbjct: 564 DVILISQSCLNKSFANKNR--NSQKNGNSQVPSL-RQVYWKRLIIDEGHIVQSKTSNAAQ 620
Query: 620 MALRLYAKHRWCITGTP 636
+ L+++ RW ++GTP
Sbjct: 621 ICRLLFSERRWAVSGTP 637
>UNIPROTKB|Q5AJC4 [details] [associations]
symbol:CaO19.1667 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
PROSITE:PS51194 CGD:CAL0000073 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 RefSeq:XP_721625.1
RefSeq:XP_721744.1 ProteinModelPortal:Q5AJC4 GeneID:3636587
GeneID:3636769 KEGG:cal:CaO19.1667 KEGG:cal:CaO19.9236
Uniprot:Q5AJC4
Length = 1250
Score = 182 (69.1 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 72/317 (22%), Positives = 137/317 (43%)
Query: 335 STLFYNPFSGSLSLSPDYTSSYVFGGILADEMGLGKTVELLACIFAHRKPAS---DDSIF 391
S +++ F+ + L D S GGIL + MGLGKT+ L+ I + + D+
Sbjct: 342 SNFYFDLFTKRIYLHAD-VMSLPLGGILGENMGLGKTLMCLSLINLTKYEITKIPSDNFL 400
Query: 392 IDTAVQVTDDQKVNLRRLKRERVECICGAVSESRKYKGLWVQCDI-CDAWQHAD--CVGY 448
+ +++ D+ K L + RE++ + S +K + + + +H C+
Sbjct: 401 LYNEIEIHDEIKT-LTEICREKI------IHSSIPWKLYNLPTSVTANLAKHPGYFCIDL 453
Query: 449 SPRGKKRRSTFELKKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPVA----TGATLIV 504
+ K +RS H K ++ R+G C+ + + TLI+
Sbjct: 454 NDHEKNKRS------H--KSGF--LINRNGVDTCKRASRTTGTKSTSYLKLYMSSTTLII 503
Query: 505 CPAPILAQWDAEITRHTRPGSLKT-CIYEGARNSSLSDTSIMD---ISELVGADIVLTTY 560
P + QW EI H P LK C ++ + D + + ++ + + + L Y
Sbjct: 504 VPDNLFIQWVDEIAHHVEPNFLKILCAANYIKSDQIKDQFLPNPKFVNTIPESPVELIEY 563
Query: 561 DVLKEDLSHDSDRHEGDRRFMRFQKR-YPVIPTLLTRIFWWRICLDEAQMVESNAAAATE 619
DV+ S + R QK +P+L +++W R+ +DE +V+S + A +
Sbjct: 564 DVILISQSCLNKSFANKNR--NSQKNGNSQVPSL-RQVYWKRLIIDEGHIVQSKTSNAAQ 620
Query: 620 MALRLYAKHRWCITGTP 636
+ L+++ RW ++GTP
Sbjct: 621 ICRLLFSERRWAVSGTP 637
>UNIPROTKB|Q8EGF3 [details] [associations]
symbol:SO_1651 "Helicase/SNF2 family domain protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR007527 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50966
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000294304 RefSeq:NP_717262.2 ProteinModelPortal:Q8EGF3
GeneID:1169445 KEGG:son:SO_1651 PATRIC:23522939 OMA:SSSHIEF
ProtClustDB:CLSK906361 Uniprot:Q8EGF3
Length = 1096
Score = 124 (48.7 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 54/234 (23%), Positives = 104/234 (44%)
Query: 602 ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRW 661
I LDEAQ +++ A ++M L + + C+TGTP++ L +L L+ F + +
Sbjct: 755 IVLDEAQQIKNAQAKVSQMIKALQSPFKLCLTGTPLENHLGELKSLMDFCLPGLLGTTAY 814
Query: 662 WIEVIRDPYEN-GDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEE 720
+ + R+ E GD ++ + + R +K V EL PP+ E L +
Sbjct: 815 FNKEFRNRIERYGDSEQVKVLSQRIAPFVLRRTKAEVVTEL--PPKTEIYQSLELEKDQR 872
Query: 721 HFYQSQHETCVGYAREVI--QRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLK 778
+ Y+S + RE+ Q + + ++ A +P + E A+ + + K
Sbjct: 873 NLYESIRLSMEKKIRELFATQGVAGSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAK 932
Query: 779 LRQACCH-PQVGSSGLRSLQQSPLS-----MDEILMVL-IGKTKIEGEEALRKL 825
L + P++ G + L S + ++E+L L I +K+ G+ LR++
Sbjct: 933 LNWLSQNLPEMVQEGRKILIFSQFTSMLILIEELLQSLEIDYSKLTGQTRLRQV 986
Score = 84 (34.6 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 352 YTSSYVFGGILADEMGLGKTVELLACIFAHRK 383
+ Y GGILAD+MGLGKT++ LA + ++
Sbjct: 645 FLKEYQLGGILADDMGLGKTIQTLAFLLKQKQ 676
Score = 73 (30.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
+LI+CP ++ W E + P SL + GA+ L + +SE D+V+TTY
Sbjct: 687 SLIICPTSLVGNWAKEAAKFA-P-SLTLAVIHGAQRGPL----LARLSEF---DVVVTTY 737
Query: 561 DVLKED 566
++ D
Sbjct: 738 PLMVRD 743
>TIGR_CMR|SO_1651 [details] [associations]
symbol:SO_1651 "Snf2 family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR007527
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50966 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000294304 RefSeq:NP_717262.2 ProteinModelPortal:Q8EGF3
GeneID:1169445 KEGG:son:SO_1651 PATRIC:23522939 OMA:SSSHIEF
ProtClustDB:CLSK906361 Uniprot:Q8EGF3
Length = 1096
Score = 124 (48.7 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 54/234 (23%), Positives = 104/234 (44%)
Query: 602 ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRW 661
I LDEAQ +++ A ++M L + + C+TGTP++ L +L L+ F + +
Sbjct: 755 IVLDEAQQIKNAQAKVSQMIKALQSPFKLCLTGTPLENHLGELKSLMDFCLPGLLGTTAY 814
Query: 662 WIEVIRDPYEN-GDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEE 720
+ + R+ E GD ++ + + R +K V EL PP+ E L +
Sbjct: 815 FNKEFRNRIERYGDSEQVKVLSQRIAPFVLRRTKAEVVTEL--PPKTEIYQSLELEKDQR 872
Query: 721 HFYQSQHETCVGYAREVI--QRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLK 778
+ Y+S + RE+ Q + + ++ A +P + E A+ + + K
Sbjct: 873 NLYESIRLSMEKKIRELFATQGVAGSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAK 932
Query: 779 LRQACCH-PQVGSSGLRSLQQSPLS-----MDEILMVL-IGKTKIEGEEALRKL 825
L + P++ G + L S + ++E+L L I +K+ G+ LR++
Sbjct: 933 LNWLSQNLPEMVQEGRKILIFSQFTSMLILIEELLQSLEIDYSKLTGQTRLRQV 986
Score = 84 (34.6 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 352 YTSSYVFGGILADEMGLGKTVELLACIFAHRK 383
+ Y GGILAD+MGLGKT++ LA + ++
Sbjct: 645 FLKEYQLGGILADDMGLGKTIQTLAFLLKQKQ 676
Score = 73 (30.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
+LI+CP ++ W E + P SL + GA+ L + +SE D+V+TTY
Sbjct: 687 SLIICPTSLVGNWAKEAAKFA-P-SLTLAVIHGAQRGPL----LARLSEF---DVVVTTY 737
Query: 561 DVLKED 566
++ D
Sbjct: 738 PLMVRD 743
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 129 (50.5 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 34/132 (25%), Positives = 67/132 (50%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFLK 652
L + W I +DEA +++ ++ ++ +RL+ +++R ITGTP+Q + +L+ LL FL
Sbjct: 303 LKKFAWEYIIIDEAHRIKNEESSLAQV-IRLFNSRNRLLITGTPLQNNIHELWALLNFLL 361
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
F S + + ++ D + H+ + + R K V E L P++E +
Sbjct: 362 PDVFGDSEAFDQWFSGEGQDSDTVVQQL-HRVLRPFLLRRVKADV--EKSLLPKKEVNLY 418
Query: 713 LTFSPIEEHFYQ 724
L + ++ +YQ
Sbjct: 419 LKMTEMQRTWYQ 430
Score = 65 (27.9 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 12/17 (70%), Positives = 16/17 (94%)
Query: 360 GILADEMGLGKTVELLA 376
GILADEMGLGKT++ ++
Sbjct: 207 GILADEMGLGKTLQTIS 223
Score = 65 (27.9 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 498 TGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVL 557
TG L++ P L W E + T P + + +GA+ + + + E D+ +
Sbjct: 235 TGPHLVIVPKSTLDNWKREFGKWT-P-EVNVLVLQGAKEERAALIAERLVDE--SFDVCI 290
Query: 558 TTYDVLKEDLSH 569
T+Y+++ + SH
Sbjct: 291 TSYEMILREKSH 302
Score = 63 (27.2 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN +++LR+ C HP + G P + DE L+ GK + L KL+ L
Sbjct: 452 RLLNIVMQLRKCCNHPYL-FEGAEP--GPPYTTDEHLVYNSGKMVV-----LDKLLKRLK 503
Query: 831 GLAGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLD 866
LI +S+ + + ++ V E+ R+D
Sbjct: 504 AQGSRVLIFSQMSRVLDILED-YCVFREYKYS-RID 537
Score = 37 (18.1 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 813 KTKIEGEEALRKL 825
KT +GEE LRK+
Sbjct: 925 KTIEDGEEKLRKI 937
>UNIPROTKB|Q47YP1 [details] [associations]
symbol:CPS_3404 "Snf2 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:YP_270079.1 ProteinModelPortal:Q47YP1 STRING:Q47YP1
GeneID:3519815 KEGG:cps:CPS_3404 PATRIC:21469757
HOGENOM:HOG000294304 BioCyc:CPSY167879:GI48-3433-MONOMER
Uniprot:Q47YP1
Length = 1134
Score = 151 (58.2 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 66/249 (26%), Positives = 111/249 (44%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R F++ + LDEA +++ + L L A+H+ C+TGTP++ L + + FL
Sbjct: 784 RKFYYLV-LDEAHYIKNTKTKLYQAFLTLKAQHKLCLTGTPMENHLGEFWAQFNFLLPGF 842
Query: 656 FSISRWWIEVIRDPYE-NGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLT 714
R + ++ R P E +G++ + ++ K + R +K ++ EL PP+ E + L
Sbjct: 843 LGGQRQFTKLFRTPIEKHGELERKQLLNQRIKPFILRRTKDKIATEL--PPKTEIIQTLR 900
Query: 715 FSPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASS--DALY-------NPIIT 765
+ Y+S V A + RLKD I + + DAL +P +
Sbjct: 901 IEGKQAELYES-----VRLAMD--SRLKDIIADKGLKRSQIEVLDALLKLRQVCNHPKLL 953
Query: 766 HAEAAKLLNSLLKLRQAC-CHPQVGSSGLRSL--QQ--SPLSM--DEILMVLIGKTKIEG 818
E AK +N KL P+ G + L Q S LS+ DE++ IG K+ G
Sbjct: 954 KLEGAKKVNQSAKLDYLMETLPEQIDEGRKILIFSQFTSMLSLIEDELIDAGIGYVKLTG 1013
Query: 819 EEALRKLVM 827
R+ V+
Sbjct: 1014 STTKRQEVV 1022
Score = 80 (33.2 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 466 RKKDMTNIVVRD---GEHICQWCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTR 522
R+ + I+ D G+ I LIE + T LIV P ++ W EI + T
Sbjct: 677 REYQLNGILADDMGLGKTIQTLAHLLIEKQQGRL-TKPILIVAPTSVIFNWANEIDKFTP 735
Query: 523 PGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTYDVLKEDLSHDSDR 573
S + ++ R+ ++ E DI++T+Y ++ +DL+H +DR
Sbjct: 736 QLSYQV-LHGNKRHEQFGCLEGVENGENQ-VDIIITSYALITKDLAHYTDR 784
Score = 76 (31.8 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 352 YTSSYVFGGILADEMGLGKTVELLACIFAHRK 383
+ Y GILAD+MGLGKT++ LA + ++
Sbjct: 675 FLREYQLNGILADDMGLGKTIQTLAHLLIEKQ 706
Score = 42 (19.8 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 39 EKEELADVDHPFFVEVNRTCWLLDEHLDISEIVLTDLKLREEFSGFIISED-FYQVSRY 96
EKE+L D P +V+++ ++ + + I+ ++L F +S D ++SR+
Sbjct: 559 EKEDLISPDSPIYVDLDNGGFVALRYQSVQPILKQFIEL---FMPNALSHDGTIELSRF 614
>TIGR_CMR|CPS_3404 [details] [associations]
symbol:CPS_3404 "Snf2 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:YP_270079.1 ProteinModelPortal:Q47YP1 STRING:Q47YP1
GeneID:3519815 KEGG:cps:CPS_3404 PATRIC:21469757
HOGENOM:HOG000294304 BioCyc:CPSY167879:GI48-3433-MONOMER
Uniprot:Q47YP1
Length = 1134
Score = 151 (58.2 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 66/249 (26%), Positives = 111/249 (44%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R F++ + LDEA +++ + L L A+H+ C+TGTP++ L + + FL
Sbjct: 784 RKFYYLV-LDEAHYIKNTKTKLYQAFLTLKAQHKLCLTGTPMENHLGEFWAQFNFLLPGF 842
Query: 656 FSISRWWIEVIRDPYE-NGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLT 714
R + ++ R P E +G++ + ++ K + R +K ++ EL PP+ E + L
Sbjct: 843 LGGQRQFTKLFRTPIEKHGELERKQLLNQRIKPFILRRTKDKIATEL--PPKTEIIQTLR 900
Query: 715 FSPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASS--DALY-------NPIIT 765
+ Y+S V A + RLKD I + + DAL +P +
Sbjct: 901 IEGKQAELYES-----VRLAMD--SRLKDIIADKGLKRSQIEVLDALLKLRQVCNHPKLL 953
Query: 766 HAEAAKLLNSLLKLRQAC-CHPQVGSSGLRSL--QQ--SPLSM--DEILMVLIGKTKIEG 818
E AK +N KL P+ G + L Q S LS+ DE++ IG K+ G
Sbjct: 954 KLEGAKKVNQSAKLDYLMETLPEQIDEGRKILIFSQFTSMLSLIEDELIDAGIGYVKLTG 1013
Query: 819 EEALRKLVM 827
R+ V+
Sbjct: 1014 STTKRQEVV 1022
Score = 80 (33.2 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 466 RKKDMTNIVVRD---GEHICQWCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTR 522
R+ + I+ D G+ I LIE + T LIV P ++ W EI + T
Sbjct: 677 REYQLNGILADDMGLGKTIQTLAHLLIEKQQGRL-TKPILIVAPTSVIFNWANEIDKFTP 735
Query: 523 PGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTYDVLKEDLSHDSDR 573
S + ++ R+ ++ E DI++T+Y ++ +DL+H +DR
Sbjct: 736 QLSYQV-LHGNKRHEQFGCLEGVENGENQ-VDIIITSYALITKDLAHYTDR 784
Score = 76 (31.8 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 352 YTSSYVFGGILADEMGLGKTVELLACIFAHRK 383
+ Y GILAD+MGLGKT++ LA + ++
Sbjct: 675 FLREYQLNGILADDMGLGKTIQTLAHLLIEKQ 706
Score = 42 (19.8 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 39 EKEELADVDHPFFVEVNRTCWLLDEHLDISEIVLTDLKLREEFSGFIISED-FYQVSRY 96
EKE+L D P +V+++ ++ + + I+ ++L F +S D ++SR+
Sbjct: 559 EKEDLISPDSPIYVDLDNGGFVALRYQSVQPILKQFIEL---FMPNALSHDGTIELSRF 614
>TAIR|locus:504955712 [details] [associations]
symbol:AT3G54460 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001810 InterPro:IPR011124 Pfam:PF00176 Pfam:PF00271
Pfam:PF00646 Pfam:PF07496 PROSITE:PS50181 SMART:SM00184
SMART:SM00256 SMART:SM00490 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0008270
EMBL:AL138656 GO:GO:0004386 InterPro:IPR017907 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 EMBL:AY091046 EMBL:BT004336
EMBL:AK221681 EMBL:AK227150 IPI:IPI00540934 PIR:T47605
RefSeq:NP_680129.1 UniGene:At.44814 ProteinModelPortal:Q9M1I1
SMR:Q9M1I1 PaxDb:Q9M1I1 PRIDE:Q9M1I1 EnsemblPlants:AT3G54460.1
GeneID:824611 KEGG:ath:AT3G54460 TAIR:At3g54460
HOGENOM:HOG000029561 InParanoid:Q9M1I1 OMA:NDPSHVE PhylomeDB:Q9M1I1
ProtClustDB:CLSN2690606 Genevestigator:Q9M1I1 Uniprot:Q9M1I1
Length = 1378
Score = 121 (47.7 bits), Expect = 9.2e-09, Sum P(4) = 9.2e-09
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAAT--EMALRLYAKHRWCITGTPIQR----KLDDLYGL 647
L ++ W R+ LDE + S+ + +MA+ L A +RW +TGTP +L + L
Sbjct: 823 LIQVHWLRVMLDEGHTLGSSVSLTNKFQMAVSLTACNRWLLTGTPTPNTPNSQLSHIQPL 882
Query: 648 LRFLKSSPFSIS-RWWIEVIRDPYE-NGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPP 705
L+FL + + ++W I P+E + G + + + M S K D +PP
Sbjct: 883 LKFLHEEVYGENPKFWEAGILRPFEAEMEEGRLRLL-QLLQRCMISSRK---KDLQMIPP 938
Query: 706 QEECVSWLTFSPIEEHFYQSQHET 729
+ V++L F P Y ET
Sbjct: 939 CIKKVTYLNFLPGHARSYNELVET 962
Score = 84 (34.6 bits), Expect = 9.2e-09, Sum P(4) = 9.2e-09
Identities = 28/97 (28%), Positives = 42/97 (43%)
Query: 292 PYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFY-NPFSGSLSLSP 350
P+Q+ A WM++RE+ PL + D D +S FY N +G +
Sbjct: 332 PHQQAAVGWMLERER---------KAEVSSHPLYLSFDTEDGFS--FYVNAVTGDIITEA 380
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAHRKPASD 387
GG+ DE GLGKT+ L+ I + +D
Sbjct: 381 APMVKDFRGGMFCDEPGLGKTITALSLILKTQGTMAD 417
Score = 59 (25.8 bits), Expect = 9.2e-09, Sum P(4) = 9.2e-09
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 500 ATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTT 559
ATLIV P ++ W +I +H L+ ++ A + LS S+ D+V+TT
Sbjct: 755 ATLIVVPTNLVNHWLTQIQKHVCSDQLRILVW--ADHIELSPHSLA-----WDYDVVITT 807
Query: 560 YDVLKED 566
+ L +
Sbjct: 808 FSRLSAE 814
Score = 57 (25.1 bits), Expect = 9.2e-09, Sum P(4) = 9.2e-09
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 416 CICGAVSESRKYKGLWVQCDICDAWQHADCVGYSPRG 452
C +++S +W+QCD C W+ G S G
Sbjct: 562 CKRKGLTDSDVESDIWMQCDSCSKWRRIIDEGVSVTG 598
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 157 (60.3 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 41/135 (30%), Positives = 69/135 (51%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYA-KHRWCITGTPIQRKLDDLYGLLRF 650
T L R W I +DEA ++ N + +RL++ +R ITGTP+Q L +L+ LL F
Sbjct: 309 TTLRRFSWRYIIIDEAHRIK-NENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNF 367
Query: 651 LKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECV 710
L FS + + E + EN ++ HK + + R K V E LPP++E +
Sbjct: 368 LLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDV--EKGLPPKKETI 425
Query: 711 SWLTFSPIEEHFYQS 725
+ S +++ +Y++
Sbjct: 426 LKVGMSQMQKQYYKA 440
Score = 67 (28.6 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 360 GILADEMGLGKTVELLACI-FAH 381
GILADEMGLGKT++ ++ + + H
Sbjct: 215 GILADEMGLGKTLQTISLLAYLH 237
Score = 50 (22.7 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 768 EAAKLLNSLLKLRQACCHP 786
E +LLN ++LR+ C HP
Sbjct: 454 ERKRLLNIAMQLRKCCNHP 472
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 499 GATLIVCPAPILAQWDAEITR 519
G ++V P L W EI R
Sbjct: 244 GPHMVVAPKSTLGNWMNEIRR 264
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 139 (54.0 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 39/132 (29%), Positives = 68/132 (51%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
F WR I +DEA ++ N + +R++ ++ R ITGTP+Q L +L+ LL FL
Sbjct: 396 FSWRYIIIDEAHRIK-NENSVLSKGVRMFNSQFRLLITGTPLQNNLHELWSLLNFLLPDV 454
Query: 656 FSISR---WWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
FS S W ++ + +V ++ HK + + R K V E LPP++E +
Sbjct: 455 FSSSDDFDKWFDLANNTENQQEV--IDKLHKVLRPFLLRRIKTEV--EKSLPPKKEIKLF 510
Query: 713 LTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 511 VGLSTMQKEWYK 522
Score = 66 (28.3 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 297 GILADEMGLGKTLQTISLL 315
Score = 61 (26.5 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN ++LR+AC HP + ++ P + E L+ GK + L KL+ L
Sbjct: 544 RLLNICMQLRKACNHPYLFDGA----EEEPYTTGEHLIDNSGKMAL-----LDKLLKKLK 594
Query: 831 GLAGIALIEKNLSQAVSLYKEAM 853
LI +S+ + + ++ M
Sbjct: 595 ERGSRVLIFSQMSRMLDILEDYM 617
Score = 50 (22.7 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E TR P L+ + G++ D + D+ +T
Sbjct: 326 GPHLIIAPKSTLSGWAKEFTRWC-P-FLRVVRFHGSKEER-EDIKKNQLI-FKKFDVCIT 381
Query: 559 TYDV 562
TY+V
Sbjct: 382 TYEV 385
>TIGR_CMR|BA_5487 [details] [associations]
symbol:BA_5487 "helicase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000099451 InterPro:IPR022138 Pfam:PF12419
RefSeq:NP_847649.1 RefSeq:YP_022153.1 RefSeq:YP_031335.1
ProteinModelPortal:Q81K50 IntAct:Q81K50 DNASU:1085116
EnsemblBacteria:EBBACT00000010571 EnsemblBacteria:EBBACT00000018432
EnsemblBacteria:EBBACT00000022093 GeneID:1085116 GeneID:2819120
GeneID:2852260 KEGG:ban:BA_5487 KEGG:bar:GBAA_5487 KEGG:bat:BAS5096
OMA:ASTIYEF ProtClustDB:CLSK888016
BioCyc:BANT260799:GJAJ-5171-MONOMER
BioCyc:BANT261594:GJ7F-5349-MONOMER Uniprot:Q81K50
Length = 918
Score = 121 (47.7 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 28/132 (21%), Positives = 64/132 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L+ + W + LDEAQ +++ ++ L A H+ +TGTP++ +L +L+ + F+
Sbjct: 566 LSTLCWDAVILDEAQNIKNPHTKQSKAVRNLQANHKIALTGTPMENRLAELWSIFDFINH 625
Query: 654 SPF-SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
S+ ++ + ++ D G ++ +F + R +K + L LP ++E ++
Sbjct: 626 GYLGSLGQFQRRFVSPIEKDRDEGKIQQVQRFISPFLLRRTKKDQTVALNLPDKQEQKAY 685
Query: 713 LTFSPIEEHFYQ 724
+ + Y+
Sbjct: 686 CPLTGEQASLYE 697
Score = 82 (33.9 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 488 LIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDI 547
L+ ++ + TG LIV P +L W E R P +L+ ++ G+ + S D
Sbjct: 490 LLYIKENNLQTGPALIVAPTSVLGNWQKEFERFA-P-NLRVQLHYGSNRAK--GESFKDF 545
Query: 548 SELVGADIVLTTYDVLKED 566
L AD+VLT+Y + + D
Sbjct: 546 --LQSADVVLTSYALAQLD 562
Score = 64 (27.6 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 352 YTSSYVFGGILADEMGLGKTVELL 375
Y FG +LAD+MGLGK+++ +
Sbjct: 464 YLRKLGFGALLADDMGLGKSIQTI 487
Score = 43 (20.2 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 772 LLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMD-EILMVLIGKTKIEGEEAL 822
+L L KL+Q C HP + SM LM LI K + E L
Sbjct: 719 ILLMLNKLKQICNHPALYLKETEPKDIIERSMKTSTLMELIENIKDQNESCL 770
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(4) = 6.3e-06
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 291 RPYQRRAAYWMVQREK 306
RPYQ+ W++ K
Sbjct: 452 RPYQQHGIEWLLYLRK 467
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 124 (48.7 bits), Expect = 4.0e-08, Sum P(4) = 4.0e-08
Identities = 36/131 (27%), Positives = 58/131 (44%)
Query: 597 IFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
I W+ + +DEA +++ + + L +++R ITGTP+ L +L+ LL FL F
Sbjct: 441 IDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIF 500
Query: 657 SISRWWIEVIR-DPYENGDVGAMEFT---HKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
S + + D E H K M R KV V E LPP+ E +
Sbjct: 501 DNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRRLKVEV--EQSLPPKREIYIF 558
Query: 713 LTFSPIEEHFY 723
+ S +++ Y
Sbjct: 559 VGMSKLQKKLY 569
Score = 73 (30.8 bits), Expect = 4.0e-08, Sum P(4) = 4.0e-08
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 356 YVFGGILADEMGLGKTVELLA--CIFAHRKPASDDSIFI 392
+ GILADEMGLGKT++ ++ C K SI I
Sbjct: 339 FKINGILADEMGLGKTLQTISLLCYLRFNKNIKKKSIII 377
Score = 69 (29.3 bits), Expect = 4.0e-08, Sum P(4) = 4.0e-08
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
++I+CP L W EI + P +K Y G ++ + S+ D++LTTY
Sbjct: 374 SIIICPRSTLDNWYEEIKKWCTP--MKAFKYYGNKDQRKELNRNLLHSDF---DVLLTTY 428
Query: 561 DVLKEDLS--HDSD 572
+++ +D S +D D
Sbjct: 429 EIVIKDKSALYDID 442
Score = 49 (22.3 bits), Expect = 4.0e-08, Sum P(4) = 4.0e-08
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
++LN L++LR+ C HP
Sbjct: 589 QMLNILMQLRKCCNHP 604
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 124 (48.7 bits), Expect = 4.0e-08, Sum P(4) = 4.0e-08
Identities = 36/131 (27%), Positives = 58/131 (44%)
Query: 597 IFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
I W+ + +DEA +++ + + L +++R ITGTP+ L +L+ LL FL F
Sbjct: 441 IDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIF 500
Query: 657 SISRWWIEVIR-DPYENGDVGAMEFT---HKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
S + + D E H K M R KV V E LPP+ E +
Sbjct: 501 DNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRRLKVEV--EQSLPPKREIYIF 558
Query: 713 LTFSPIEEHFY 723
+ S +++ Y
Sbjct: 559 VGMSKLQKKLY 569
Score = 73 (30.8 bits), Expect = 4.0e-08, Sum P(4) = 4.0e-08
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 356 YVFGGILADEMGLGKTVELLA--CIFAHRKPASDDSIFI 392
+ GILADEMGLGKT++ ++ C K SI I
Sbjct: 339 FKINGILADEMGLGKTLQTISLLCYLRFNKNIKKKSIII 377
Score = 69 (29.3 bits), Expect = 4.0e-08, Sum P(4) = 4.0e-08
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
++I+CP L W EI + P +K Y G ++ + S+ D++LTTY
Sbjct: 374 SIIICPRSTLDNWYEEIKKWCTP--MKAFKYYGNKDQRKELNRNLLHSDF---DVLLTTY 428
Query: 561 DVLKEDLS--HDSD 572
+++ +D S +D D
Sbjct: 429 EIVIKDKSALYDID 442
Score = 49 (22.3 bits), Expect = 4.0e-08, Sum P(4) = 4.0e-08
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
++LN L++LR+ C HP
Sbjct: 589 QMLNILMQLRKCCNHP 604
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 113 (44.8 bits), Expect = 4.8e-08, Sum P(4) = 4.8e-08
Identities = 37/159 (23%), Positives = 72/159 (45%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
+ L W + +DEA +++ ++ R +TGTPIQ L +LY LL +
Sbjct: 155 SFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSVVFRLLLTGTPIQNSLQELYSLLSVV 214
Query: 652 KSSPFSISRW--WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEEC 709
+ F + +++ +D E A E H+ + + R K V+ EL P + E
Sbjct: 215 EPDLFCREQVEDFVQCYQD-IEKESKSASEL-HRLLRPFLLRRVKAQVATEL--PKKTEV 270
Query: 710 VSWLTFSPIEEHFYQS-QHETCVGYAREVIQRLK-DNIL 746
V + S +++ +Y++ + + E +++K N+L
Sbjct: 271 VIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNVL 309
Score = 87 (35.7 bits), Expect = 4.8e-08, Sum P(4) = 4.8e-08
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+CP +L+ W E+ R PG L Y G + D+ + G ++LT
Sbjct: 90 GPFLILCPLSVLSNWKEEMERFA-PG-LSCVTYTGDKEERARRQQ--DLRQESGFHVLLT 145
Query: 559 TYDVLKEDLS 568
TY++ +D S
Sbjct: 146 TYEICLKDAS 155
Score = 61 (26.5 bits), Expect = 4.8e-08, Sum P(4) = 4.8e-08
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPASDDSIFI 392
G IL DEMGLGKT + +A + +D+ F+
Sbjct: 60 GCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFL 93
Score = 45 (20.9 bits), Expect = 4.8e-08, Sum P(4) = 4.8e-08
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 767 AEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGK 813
A+ KL N L +LR+ HP + ++ P + E L+ GK
Sbjct: 300 AKKVKLQNVLTQLRKCVDHPYL----FDGVEPEPFEVGEHLIEASGK 342
>ASPGD|ASPL0000061821 [details] [associations]
symbol:AN10043 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001308 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EnsemblFungi:CADANIAT00002546 HOGENOM:HOG000175622 OMA:MEIEESV
Uniprot:C8VUX5
Length = 648
Score = 132 (51.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 33/134 (24%), Positives = 70/134 (52%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
+ W + LDE ++++ + T+ RL +++R +TGTPIQ L +L+ +L +L
Sbjct: 111 KTLWAHVVLDEGHRIKNSRSKRTQGVYRLRSENRIVLTGTPIQNDLTELWSILHWLYPDV 170
Query: 656 FSISRWWIEVIRDPYE--NGDVGAMEFTH--KFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F + ++ + + +G ++ +H +F K +M R +K L LPP++E V
Sbjct: 171 FVPAT--AKLFENAFSLTDGKFDSIFLSHITRFLKVVMLRRTKCDSQIGLDLPPKKETVF 228
Query: 712 WLTFSPIEEHFYQS 725
+ + ++ +Y++
Sbjct: 229 SVPLTELQLGWYRT 242
Score = 80 (33.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 493 DSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVG 552
D+ A L+VCP +L W +EI+R T L+ Y G S ++ G
Sbjct: 34 DNERADSKFLVVCPLSVLNTWMSEISRWTT--GLRPMAYHGG---SEERENLRTCFRQQG 88
Query: 553 AD---IVLTTYDVLKEDL 567
A+ IV+TTY+ L DL
Sbjct: 89 AEPWNIVVTTYETLCSDL 106
Score = 73 (30.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPASD-DSIFI 392
GGILAD+MGLGKT++ L+ +F + K DS F+
Sbjct: 10 GGILADDMGLGKTLQALS-LFQYVKDNERADSKFL 43
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 135 (52.6 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 306 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 365
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 366 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKIYLGLS 423
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 424 KMQREWY 430
Score = 69 (29.3 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 207 GILADEMGLGKTLQTIALL 225
Score = 55 (24.4 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK + L KL+ L
Sbjct: 451 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVSNSGKMVV-----LDKLLAKLK 502
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 503 EQGSRVLIFSQMTRLLDILED 523
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 140 (54.3 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 36/134 (26%), Positives = 67/134 (50%)
Query: 590 IPTLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLR 649
+ T L ++ W I +DEA +++ + +E L +++R ITGTP+Q L +L+ LL
Sbjct: 245 VKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLN 304
Query: 650 FLKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEEC 709
FL F+ S + + +G+ ++ HK + + R K V E L P++E
Sbjct: 305 FLLPDIFTSSDDFDSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKSDV--EKSLLPKKEV 362
Query: 710 VSWLTFSPIEEHFY 723
++ S ++ +Y
Sbjct: 363 KVYVGLSKMQREWY 376
Score = 68 (29.0 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ I
Sbjct: 153 GILADEMGLGKTLQTISMI 171
Score = 54 (24.1 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 768 EAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVM 827
E A+L+N L+ LR+ HP + G P + D+ L+ GK + L KL+M
Sbjct: 394 EKARLMNILMHLRKCVNHPYL-FDGAEP--GPPFTTDQHLVDNSGKMVV-----LDKLLM 445
Query: 828 ALNGLAGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLD 866
LI S+ + L ++ H E RLD
Sbjct: 446 KFKEQGSRVLIFSQFSRMLDLLEDFCWW--RHYEYCRLD 482
>UNIPROTKB|O53499 [details] [associations]
symbol:helZ "PROBABLE HELICASE HELZ" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005618 GenomeReviews:AL123456_GR GO:GO:0003677 EMBL:BX842578
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
PIR:B70841 RefSeq:NP_216617.1 ProteinModelPortal:O53499 SMR:O53499
EnsemblBacteria:EBMYCT00000002428 GeneID:888635 KEGG:mtu:Rv2101
PATRIC:18153236 TubercuList:Rv2101 HOGENOM:HOG000099451 OMA:PYQERGL
ProtClustDB:CLSK872005 InterPro:IPR022138 Pfam:PF12419
Uniprot:O53499
Length = 1013
Score = 117 (46.2 bits), Expect = 7.8e-08, Sum P(5) = 7.8e-08
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
W R+ LDEAQ V+++ + A + RL A HR +TGTP++ +L +L+ ++ FL
Sbjct: 656 WNRVVLDEAQAVKNSLSRAAKAVRRLRAAHRVALTGTPMENRLAELWSIMDFL 708
Score = 76 (31.8 bits), Expect = 7.8e-08, Sum P(5) = 7.8e-08
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 352 YTSSYVFGGILADEMGLGKTVELLA 376
+ SS G LAD+MGLGKTV+LLA
Sbjct: 546 FLSSLGLGSCLADDMGLGKTVQLLA 570
Score = 71 (30.1 bits), Expect = 7.8e-08, Sum P(5) = 7.8e-08
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G TL++CP ++ W E R P +L+ + G + L ++ D L D+V++
Sbjct: 586 GPTLLLCPMSLVGNWPQEAARFA-P-NLRVYAHHGG--ARLHGEALRD--HLERTDLVVS 639
Query: 559 TYDVLKEDLSHDSDRHEGDR 578
TY D+ ++ +E +R
Sbjct: 640 TYTTATRDIDELAE-YEWNR 658
Score = 42 (19.8 bits), Expect = 7.8e-08, Sum P(5) = 7.8e-08
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 772 LLNSLLKLRQACCHP 786
+L ++ KL+Q C HP
Sbjct: 804 VLAAMAKLKQVCNHP 818
Score = 40 (19.1 bits), Expect = 7.8e-08, Sum P(5) = 7.8e-08
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 291 RPYQRRAAYWM 301
RPYQ+R W+
Sbjct: 534 RPYQQRGLAWL 544
Score = 37 (18.1 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 409 LKRERVECICGAVSESRKYKGLWVQCDICDAWQHADCVGYSPRGKK 454
L E + + S + +G WV D + + + P G+K
Sbjct: 432 LSEEEIAALTETKSPLIRLRGQWVALDTEQMRRGLEFLERKPTGRK 477
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 134 (52.2 bits), Expect = 8.4e-08, Sum P(5) = 8.4e-08
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L R+ W I +DEA +++ +A +++ Y+K+R ITGTP+Q L +L+ LL FL
Sbjct: 301 LKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLP 360
Query: 654 SPFSISRW---WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECV 710
F S W E ++ E ++ H + R K V L LP E V
Sbjct: 361 DIFGDSELFDEWFE--QNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSL-LPKIETNV 417
Query: 711 SWLTFSPIEEHFYQS 725
++ + ++ +Y+S
Sbjct: 418 -YVGMTDMQIQWYKS 431
Score = 65 (27.9 bits), Expect = 8.4e-08, Sum P(5) = 8.4e-08
Identities = 12/17 (70%), Positives = 16/17 (94%)
Query: 360 GILADEMGLGKTVELLA 376
GILADEMGLGKT++ ++
Sbjct: 205 GILADEMGLGKTLQTIS 221
Score = 60 (26.2 bits), Expect = 8.4e-08, Sum P(5) = 8.4e-08
Identities = 25/95 (26%), Positives = 42/95 (44%)
Query: 757 DALYNPIITHAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKI 816
DA+ + +LLN +++LR+ C HP + G P + DE L+ GK I
Sbjct: 438 DAVNGAVGKREGKTRLLNIVMQLRKCCNHPYL-FEGAEP--GPPYTTDEHLIFNSGKMII 494
Query: 817 EGEEALRKLVMALNGLAGIALIEKNLSQAVSLYKE 851
L KL+ L LI +S+ + + ++
Sbjct: 495 -----LDKLLKRLKEKGSRVLIFSQMSRLLDILED 524
Score = 49 (22.3 bits), Expect = 8.4e-08, Sum P(5) = 8.4e-08
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L W E + T P ++ + G +++ +D + +I D+++T
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWT-P-NVNVLVLHGDKDTR-ADI-VRNIILEARFDVLIT 289
Query: 559 TYD-VLKE 565
+Y+ V++E
Sbjct: 290 SYEMVIRE 297
Score = 39 (18.8 bits), Expect = 8.4e-08, Sum P(5) = 8.4e-08
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1035 LIRKIEEAISGSLNKSRALRTASRTSLSQ 1063
++R+ E+ + +SR T T LSQ
Sbjct: 1055 IVREYEQPDANKKKRSRTSATREDTPLSQ 1083
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 125 (49.1 bits), Expect = 9.5e-08, Sum P(5) = 9.5e-08
Identities = 31/133 (23%), Positives = 64/133 (48%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLK 652
+L I W + +DE +++ + + + HR +TGTP+Q LD+L+ L+ FL
Sbjct: 410 VLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLD 469
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
+ F + E +D + + + HK + R K V ++ PP++E +
Sbjct: 470 AGKFGSLEEFQEEFKDINQEEQISRL---HKMLAPHLLRRVKKDVMKDM--PPKKELILR 524
Query: 713 LTFSPIEEHFYQS 725
+ S +++ +Y++
Sbjct: 525 VDLSSLQKEYYKA 537
Score = 65 (27.9 bits), Expect = 9.5e-08, Sum P(5) = 9.5e-08
Identities = 15/22 (68%), Positives = 18/22 (81%)
Query: 361 ILADEMGLGKTVE---LLACIF 379
ILADEMGLGKT++ LLA +F
Sbjct: 295 ILADEMGLGKTIQSIALLASLF 316
Score = 62 (26.9 bits), Expect = 9.5e-08, Sum P(5) = 9.5e-08
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 888 ATELSQNEQHFPGCSEKAFKIHSIETCDEN---ARKCQRVSREENSDFTDAEDPSGHLSD 944
A E+S +++ G KAFK+ + E DEN A + QRV+ E S ++ D + + +
Sbjct: 800 AEEVSVDDEEENGFL-KAFKVANFEYIDENEAAALEAQRVAAESKSSAGNS-DRASYWEE 857
Query: 945 LSENGF 950
L ++ F
Sbjct: 858 LLKDKF 863
Score = 54 (24.1 bits), Expect = 9.5e-08, Sum P(5) = 9.5e-08
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 763 IITHAEAAKL-LNSLL-KLRQACCHP 786
++T A++ LN+++ +LR+ CCHP
Sbjct: 545 VLTKKGGAQISLNNIMMELRKVCCHP 570
Score = 46 (21.3 bits), Expect = 9.5e-08, Sum P(5) = 9.5e-08
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 982 LSGFSVKLSVAQQEFRKSYMQVCNALDDREKQ 1013
+ G +V + A+ E + Y Q+C LD+ ++
Sbjct: 1245 IMGAAVDNNQARVEIAQHYNQMCKLLDENARE 1276
Score = 46 (21.3 bits), Expect = 6.1e-06, Sum P(5) = 6.1e-06
Identities = 23/84 (27%), Positives = 33/84 (39%)
Query: 368 LGKTVELLACIFAHRKPA-----SDDSIFIDTAVQVTDDQKVNLRRLKRERVECICGAVS 422
+ VE L I + RKP SDD F+ + + + +R +E C A
Sbjct: 1 MSSLVERLR-IRSDRKPVYNLDDSDDDDFVPKKDRTFEQVEAIVRTDAKENA---CQACG 56
Query: 423 ESRKYKGLWVQCDICDAWQHADCV 446
ES V C+ C HA C+
Sbjct: 57 ESTNL----VSCNTCTYAFHAKCL 76
Score = 40 (19.1 bits), Expect = 2.2e-05, Sum P(5) = 2.2e-05
Identities = 16/56 (28%), Positives = 19/56 (33%)
Query: 463 KHTRKKDMTNIVVR-DG-EHICQWCDELIEATDSPVATGATLIVCPAPILAQWDAE 516
K R + +VR D E+ CQ C E T A C P L E
Sbjct: 31 KKDRTFEQVEAIVRTDAKENACQACGESTNLVSCNTCTYAFHAKCLVPPLKDASVE 86
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 130 (50.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ +R +TGTP+Q L +L+ LL FL F
Sbjct: 285 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVF 344
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ S + GD +E H + + R K V E LPP++E ++ S
Sbjct: 345 NSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADV--EKSLPPKKEVKIYVGLS 402
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 403 KMQREWY 409
Score = 66 (28.3 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 186 GILADEMGLGKTLQTISLL 204
Score = 52 (23.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
+LLN L++LR+ C HP
Sbjct: 430 RLLNILMQLRKCCNHP 445
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 117 (46.2 bits), Expect = 1.0e-07, Sum P(5) = 1.0e-07
Identities = 35/140 (25%), Positives = 61/140 (43%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L +W + +DE +++ R A ++ +TGTP+Q L +L+ LL FL
Sbjct: 343 LQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLP 402
Query: 654 SPF----SISRWW-IEVIRDPYEN-----GDVGAMEFTHKFFKEIMCRSSKVHVSDELQL 703
F S W+ I + + E+ + + H+ + R K V+ L++
Sbjct: 403 DVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVA--LEV 460
Query: 704 PPQEECVSWLTFSPIEEHFY 723
PP+ E V + S +E FY
Sbjct: 461 PPKREVVVYAPLSKKQEIFY 480
Score = 74 (31.1 bits), Expect = 1.0e-07, Sum P(5) = 1.0e-07
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKTV+ +A I
Sbjct: 244 GILADEMGLGKTVQCIATI 262
Score = 52 (23.4 bits), Expect = 1.0e-07, Sum P(5) = 1.0e-07
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 503 IVC-PAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGA----DIVL 557
+VC P L W AE R T P + T +Y G + + +I + G +V+
Sbjct: 275 LVCGPLSTLPNWMAEFKRFT-P-DIPTMLYHGTQEER--QKLVRNIYKRKGTLQIHPVVI 330
Query: 558 TTYDVLKED 566
T++++ D
Sbjct: 331 TSFEIAMRD 339
Score = 51 (23.0 bits), Expect = 1.0e-07, Sum P(5) = 1.0e-07
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGK 813
KL N ++ LR+ C HP + + + Q +DE L+ GK
Sbjct: 559 KLQNIMMLLRKCCNHPYLIEYPIDPVTQE-FKIDEELVTNSGK 600
Score = 46 (21.3 bits), Expect = 1.0e-07, Sum P(5) = 1.0e-07
Identities = 14/77 (18%), Positives = 30/77 (38%)
Query: 202 LLENSRKTWKKSMINVMSWLRPEVLTSEARYGVSKSMEMDVELMTRTKNDVSASQKHASF 261
+LE +R +W + + +L Y +M+ + + K +K S
Sbjct: 48 MLEKARMSWDRESTEIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKKESL 107
Query: 262 DVARFYEAIKRSKAEPM 278
V + +I S+ +P+
Sbjct: 108 KVKKGKNSIDASEEKPV 124
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 117 (46.2 bits), Expect = 1.3e-07, Sum P(5) = 1.3e-07
Identities = 35/140 (25%), Positives = 61/140 (43%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L +W + +DE +++ R A ++ +TGTP+Q L +L+ LL FL
Sbjct: 344 LQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLP 403
Query: 654 SPF----SISRWW-IEVIRDPYEN-----GDVGAMEFTHKFFKEIMCRSSKVHVSDELQL 703
F S W+ I + + E+ + + H+ + R K V+ L++
Sbjct: 404 DVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVA--LEV 461
Query: 704 PPQEECVSWLTFSPIEEHFY 723
PP+ E V + S +E FY
Sbjct: 462 PPKREVVVYAPLSKKQEIFY 481
Score = 74 (31.1 bits), Expect = 1.3e-07, Sum P(5) = 1.3e-07
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKTV+ +A I
Sbjct: 245 GILADEMGLGKTVQCIATI 263
Score = 52 (23.4 bits), Expect = 1.3e-07, Sum P(5) = 1.3e-07
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 503 IVC-PAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGA----DIVL 557
+VC P L W AE R T P + T +Y G + + +I + G +V+
Sbjct: 276 LVCGPLSTLPNWMAEFQRFT-P-DIPTMLYHGTQQERRK--LVKNIHKRKGTLQIHPVVI 331
Query: 558 TTYDVLKED 566
T++++ D
Sbjct: 332 TSFEIAMRD 340
Score = 51 (23.0 bits), Expect = 1.3e-07, Sum P(5) = 1.3e-07
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGK 813
KL N ++ LR+ C HP + + + Q +DE L+ GK
Sbjct: 560 KLQNIMMLLRKCCNHPYLIEYPIDPVTQE-FKIDEELVTNSGK 601
Score = 45 (20.9 bits), Expect = 1.3e-07, Sum P(5) = 1.3e-07
Identities = 12/77 (15%), Positives = 31/77 (40%)
Query: 202 LLENSRKTWKKSMINVMSWLRPEVLTSEARYGVSKSMEMDVELMTRTKNDVSASQKHASF 261
++E +R +W + +++ +L Y +M+ + + K +K +
Sbjct: 48 MIEKARMSWDRESVDIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKKETL 107
Query: 262 DVARFYEAIKRSKAEPM 278
V + +I S+ P+
Sbjct: 108 KVTKGKNSIGASEENPV 124
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 111 (44.1 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 39/159 (24%), Positives = 73/159 (45%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
+ L W + +DEA +++ ++ A R +TGTPIQ L +LY LL +
Sbjct: 155 SFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLCVV 214
Query: 652 KSSPFSISRW--WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEEC 709
+ F + +++ +D E A E H+ + + R K V+ EL P + E
Sbjct: 215 EPDLFCREQVEDFVQRYQD-IEKESKSASEL-HRLLQPFLLRRVKAQVATEL--PKKTEV 270
Query: 710 VSWLTFSPIEEHFYQS-QHETCVGYAREVIQRLK-DNIL 746
V + S +++ +Y++ + + E +++K NIL
Sbjct: 271 VVYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNIL 309
Score = 84 (34.6 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G L++CP +L+ W E+ R PG L Y G + D+ + G ++LT
Sbjct: 90 GPFLVLCPLSVLSNWKEEMERFA-PG-LSCVTYTGDKEERARLQQ--DLRQESGFHVLLT 145
Query: 559 TYDVLKEDLS 568
TY++ +D S
Sbjct: 146 TYEICLKDAS 155
Score = 61 (26.5 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPASDDSIFI 392
G IL DEMGLGKT + +A + +D+ F+
Sbjct: 60 GCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFL 93
Score = 45 (20.9 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 767 AEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGK 813
A+ KL N L +LR+ HP + ++ P + E L+ GK
Sbjct: 300 AKKVKLQNILTQLRKCVDHPYL----FDGVEPEPFEVGEHLIEASGK 342
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 135 (52.6 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 282 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 341
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 342 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKIYLGLS 399
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 400 KMQREWY 406
Score = 69 (29.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 183 GILADEMGLGKTLQTIALL 201
Score = 55 (24.4 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK + L KL+ L
Sbjct: 427 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVSNSGKMVV-----LDKLLAKLK 478
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 479 EQGSRVLIFSQMTRLLDILED 499
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 136 (52.9 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 38/127 (29%), Positives = 62/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+A +R +TGTP+Q L +L+ LL FL F
Sbjct: 263 FNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF 322
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ S + D GD +E H + + R K V E LPP++E +L S
Sbjct: 323 N-SASDFDSWFDTNCLGDQKLVERLHAVLRPFLLRRIKAEV--EKSLPPKKEVKIYLGLS 379
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 380 KMQREWY 386
Score = 69 (29.3 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 164 GILADEMGLGKTLQTIALL 182
Score = 54 (24.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + D L++ GK AL KL+ +
Sbjct: 407 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDTHLVINSGKMV-----ALDKLLPKVQ 458
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 459 EQGSRVLIFSQMTRVLDILED 479
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 135 (52.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 303 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 362
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 363 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKIYLGLS 420
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 421 KMQREWY 427
Score = 69 (29.3 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 204 GILADEMGLGKTLQTIALL 222
Score = 55 (24.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK + L KL+ L
Sbjct: 448 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVSNSGKMVV-----LDKLLAKLK 499
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 500 EQGSRVLIFSQMTRLLDILED 520
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 135 (52.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 306 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 365
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 366 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKIYLGLS 423
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 424 KMQREWY 430
Score = 69 (29.3 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 207 GILADEMGLGKTLQTIALL 225
Score = 55 (24.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK + L KL+ L
Sbjct: 451 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVSNSGKMVV-----LDKLLAKLK 502
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 503 EQGSRVLIFSQMTRLLDILED 523
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 135 (52.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 306 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 365
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 366 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKIYLGLS 423
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 424 KMQREWY 430
Score = 69 (29.3 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 207 GILADEMGLGKTLQTIALL 225
Score = 55 (24.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK + L KL+ L
Sbjct: 451 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVSNSGKMVV-----LDKLLAKLK 502
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 503 EQGSRVLIFSQMTRLLDILED 523
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 135 (52.6 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 306 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 365
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 366 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKIYLGLS 423
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 424 KMQREWY 430
Score = 69 (29.3 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 207 GILADEMGLGKTLQTIALL 225
Score = 55 (24.4 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK + L KL+ L
Sbjct: 451 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVSNSGKMVV-----LDKLLAKLK 502
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 503 EQGSRVLIFSQMTRLLDILED 523
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 135 (52.6 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 306 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 365
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 366 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKIYLGLS 423
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 424 KMQREWY 430
Score = 69 (29.3 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 207 GILADEMGLGKTLQTIALL 225
Score = 55 (24.4 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK + L KL+ L
Sbjct: 451 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVSNSGKMVV-----LDKLLAKLK 502
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 503 EQGSRVLIFSQMTRLLDILED 523
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 135 (52.6 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 306 FHWRYLVIDEAHRIKNEKSKLSEIVRDFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 365
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 366 NSAEDFDSWFDTKNCLGDQKLVERLHTVLKPFLLRRIKTDV--EKSLPPKKEIKIYLGLS 423
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 424 KMQREWY 430
Score = 69 (29.3 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 207 GILADEMGLGKTLQTIALL 225
Score = 55 (24.4 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK + L KL+ L
Sbjct: 451 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVSNSGKMVV-----LDKLLAKLK 502
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 503 EQGSRVLIFSQMTRLLDILED 523
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 118 (46.6 bits), Expect = 2.0e-07, Sum P(5) = 2.0e-07
Identities = 35/141 (24%), Positives = 62/141 (43%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLK 652
+L +W + +DE +++ R A ++ +TGTP+Q L +L+ LL FL
Sbjct: 342 VLQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLL 401
Query: 653 SSPF----SISRWW-IEVIRDPYEN-----GDVGAMEFTHKFFKEIMCRSSKVHVSDELQ 702
F S W+ I + + E+ + + H+ + R K V+ L+
Sbjct: 402 PDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVA--LE 459
Query: 703 LPPQEECVSWLTFSPIEEHFY 723
+PP+ E V + S +E FY
Sbjct: 460 VPPKREVVVYAPLSKKQEVFY 480
Score = 74 (31.1 bits), Expect = 2.0e-07, Sum P(5) = 2.0e-07
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKTV+ +A I
Sbjct: 244 GILADEMGLGKTVQCIATI 262
Score = 51 (23.0 bits), Expect = 2.0e-07, Sum P(5) = 2.0e-07
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGK 813
KL N ++ LR+ C HP + + + Q +DE L+ GK
Sbjct: 559 KLQNIMMLLRKCCNHPYLIEYPIDPVTQE-FKIDEELVTNSGK 600
Score = 50 (22.7 bits), Expect = 2.0e-07, Sum P(5) = 2.0e-07
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 503 IVC-PAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGA----DIVL 557
+VC P L W AE R T P + T +Y G++ + I + G +V+
Sbjct: 275 LVCGPLSTLPNWMAEFQRFT-P-EIPTMLYHGSQQERRK--LVNHIHKRKGTLQIHPVVI 330
Query: 558 TTYDVLKED 566
T++++ D
Sbjct: 331 TSFEIAMRD 339
Score = 44 (20.5 bits), Expect = 2.0e-07, Sum P(5) = 2.0e-07
Identities = 13/73 (17%), Positives = 29/73 (39%)
Query: 202 LLENSRKTWKKSMINVMSWLRPEVLTSEARYGVSKSMEMDVELMTRTKNDVSASQKHASF 261
+LE +R +W + +++ +L Y +M+ + + K +K S
Sbjct: 48 MLEKARMSWDRESVDIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKKESL 107
Query: 262 DVARFYEAIKRSK 274
V + +I S+
Sbjct: 108 KVTKGKNSIDASE 120
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 121 (47.7 bits), Expect = 2.0e-07, Sum P(5) = 2.0e-07
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T L +W + +DE +++ R A ++ +TGTP+Q L +L+ LL FL
Sbjct: 319 TTLQNCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFL 378
Query: 652 KSSPF----SISRWW-IEVIRDPYEN-----GDVGAMEFTHKFFKEIMCRSSKVHVSDEL 701
F S W+ I + + E+ + + H+ + R K V+ L
Sbjct: 379 LPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVA--L 436
Query: 702 QLPPQEECVSWLTFSPIEEHFY 723
++PP+ E V + S +E FY
Sbjct: 437 EVPPKREVVVYAPLSKKQEIFY 458
Score = 74 (31.1 bits), Expect = 2.0e-07, Sum P(5) = 2.0e-07
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKTV+ +A I
Sbjct: 222 GILADEMGLGKTVQCIATI 240
Score = 53 (23.7 bits), Expect = 2.0e-07, Sum P(5) = 2.0e-07
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 503 IVC-PAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGA----DIVL 557
+VC P L W AE R T P + T +Y G + + I E G +V+
Sbjct: 253 LVCGPLSTLPNWMAEFKRFT-P-EIPTMLYHGTQQERR--ILVKHIHERKGTLQIHPVVI 308
Query: 558 TTYDVLKED 566
T++++ D
Sbjct: 309 TSFEIAMRD 317
Score = 51 (23.0 bits), Expect = 2.0e-07, Sum P(5) = 2.0e-07
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGK 813
KL N ++ LR+ C HP + + + Q +DE L+ GK
Sbjct: 537 KLQNIMMLLRKCCNHPYLIEYPIDPVTQE-FKVDEELVTNSGK 578
Score = 37 (18.1 bits), Expect = 2.0e-07, Sum P(5) = 2.0e-07
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 245 MTRTKNDVSASQKHA 259
+T+ KN + AS+++A
Sbjct: 88 VTKDKNSIDASEENA 102
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 136 (52.9 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 37/137 (27%), Positives = 68/137 (49%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R+ W + LDEAQ ++S+++ ++ L+ ++R +TGTPIQ + +L+ LL F+ +
Sbjct: 645 RVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTL 704
Query: 656 FS----ISRWWIEVIRDPYENG---DVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEE 708
F + W+ + I EN D + H K M R K V +EL + E
Sbjct: 705 FDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS--DKIE 762
Query: 709 CVSWLTFSPIEEHFYQS 725
+++ + ++ YQ+
Sbjct: 763 ILTYCQLTSRQKLLYQA 779
Score = 75 (31.5 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKTV+ +A + AH
Sbjct: 541 GILADEMGLGKTVQSIA-LLAH 561
Score = 53 (23.7 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 20/75 (26%), Positives = 30/75 (40%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD---- 554
G LI+ PA L W E TR P K Y G + L D
Sbjct: 570 GPFLIISPASTLNNWHQEFTRFV-P-KFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFH 627
Query: 555 IVLTTYDVLKEDLSH 569
+V+T+Y ++ +D+ +
Sbjct: 628 VVITSYQLVVQDVKY 642
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 135 (52.6 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 283 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 342
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 343 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKIYLGLS 400
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 401 KMQREWY 407
Score = 69 (29.3 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 184 GILADEMGLGKTLQTIALL 202
Score = 54 (24.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK AL KL+ +
Sbjct: 428 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVSNSGKMV-----ALDKLLARIK 479
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 480 EQGSRVLIFSQMTRLLDILED 500
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 119 (46.9 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W + +DEA +++ + + L +TGTPIQ L +LY LL F++ F
Sbjct: 170 WSVLVVDEAHRLKNQNSLLHKTLLEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFPK 229
Query: 659 SRW--WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ +++ +D + D A E HK + + R K V+ EL P + E V + S
Sbjct: 230 EQVGDFVQRYQDIEKESD-SASEL-HKLLQPFLLRRVKAEVATEL--PKKTEVVLYHGMS 285
Query: 717 PIEEHFYQS-QHETCVGYAREVIQRLK-DNILKR 748
+++ +Y++ + + E+ +++K N+L +
Sbjct: 286 ALQKKYYKAILMKDLDAFESEMAKKVKLQNVLSQ 319
Score = 79 (32.9 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+CP +L+ W E+ R PG L +Y G + D+ + ++LT
Sbjct: 98 GPFLILCPLSVLSNWTEEMERFA-PG-LSCVMYAGDKEERARLQQ--DLKQESRFHVLLT 153
Query: 559 TYDVLKEDLS 568
TY++ +D S
Sbjct: 154 TYEICLKDSS 163
Score = 61 (26.5 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPASDDSIFI 392
G IL DEMGLGKT + +A +D+ F+
Sbjct: 68 GCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFL 101
Score = 39 (18.8 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 767 AEAAKLLNSLLKLRQACCHP 786
A+ KL N L +LR+ HP
Sbjct: 308 AKKVKLQNVLSQLRKCVDHP 327
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 135 (52.6 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 307 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 366
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 367 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKIYLGLS 424
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 425 KMQREWY 431
Score = 69 (29.3 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 208 GILADEMGLGKTLQTIALL 226
Score = 53 (23.7 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK AL KL+ +
Sbjct: 452 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVGNSGKMV-----ALDKLLARIK 503
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 504 EQGSRVLIFSQMTRLLDILED 524
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 142 (55.0 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 49/200 (24%), Positives = 88/200 (44%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R+ W + LDEAQ ++S+ + ++ L+ ++R +TGTPIQ + +L+ LL F+ +
Sbjct: 644 RVKWQYMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTL 703
Query: 656 FS----ISRWWIEVIRDPYENG---DVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEE 708
F + W+ + I EN D + H K M R K V +EL +
Sbjct: 704 FDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELS-----D 758
Query: 709 CVSWLTFSPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAE 768
+ LT+ + R + Q LK+ I ++ + A H+
Sbjct: 759 KIEILTYCQLTSR------------QRLLYQALKNKISIEDLLQSSMGSAQQ----AHST 802
Query: 769 AAKLLNSLLKLRQACCHPQV 788
+ L+N +++ R+ C HP +
Sbjct: 803 TSSLMNLVMQFRKVCNHPDL 822
Score = 75 (31.5 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKTV+ +A + AH
Sbjct: 540 GILADEMGLGKTVQSIA-LLAH 560
Score = 45 (20.9 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 18/75 (24%), Positives = 30/75 (40%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD---- 554
G LI+ PA L W E +R P K Y G + L +
Sbjct: 569 GPFLIISPASTLNNWHQEFSRFV-P-KFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFH 626
Query: 555 IVLTTYDVLKEDLSH 569
+V+T+Y ++ +D+ +
Sbjct: 627 VVITSYQLVVQDVKY 641
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 134 (52.2 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R+ W + LDEAQ ++S+++ ++ L+ ++R +TGTPIQ + +L+ LL F+ +
Sbjct: 646 RVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTL 705
Query: 656 FS----ISRWWIEVIRDPYENG---DVGAMEFTHKFFKEIMCRSSKVHVSDEL 701
F + W+ + I EN D + H K M R K V +EL
Sbjct: 706 FDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENEL 758
Score = 75 (31.5 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKTV+ +A + AH
Sbjct: 542 GILADEMGLGKTVQSIA-LLAH 562
Score = 53 (23.7 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 20/75 (26%), Positives = 30/75 (40%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD---- 554
G LI+ PA L W E TR P K Y G + L D
Sbjct: 571 GPFLIISPASTLNNWHQEFTRFV-P-KFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFH 628
Query: 555 IVLTTYDVLKEDLSH 569
+V+T+Y ++ +D+ +
Sbjct: 629 VVITSYQLVVQDVKY 643
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 134 (52.2 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R+ W + LDEAQ ++S+++ ++ L+ ++R +TGTPIQ + +L+ LL F+ +
Sbjct: 652 RVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTL 711
Query: 656 FS----ISRWWIEVIRDPYENG---DVGAMEFTHKFFKEIMCRSSKVHVSDEL 701
F + W+ + I EN D + H K M R K V +EL
Sbjct: 712 FDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENEL 764
Score = 75 (31.5 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKTV+ +A + AH
Sbjct: 548 GILADEMGLGKTVQSIA-LLAH 568
Score = 53 (23.7 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 20/75 (26%), Positives = 30/75 (40%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD---- 554
G LI+ PA L W E TR P K Y G + L D
Sbjct: 577 GPFLIISPASTLNNWHQEFTRFV-P-KFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFH 634
Query: 555 IVLTTYDVLKEDLSH 569
+V+T+Y ++ +D+ +
Sbjct: 635 VVITSYQLVVQDVKY 649
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 134 (52.2 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R+ W + LDEAQ ++S+++ ++ L+ ++R +TGTPIQ + +L+ LL F+ +
Sbjct: 652 RVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTL 711
Query: 656 FS----ISRWWIEVIRDPYENG---DVGAMEFTHKFFKEIMCRSSKVHVSDEL 701
F + W+ + I EN D + H K M R K V +EL
Sbjct: 712 FDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENEL 764
Score = 75 (31.5 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKTV+ +A + AH
Sbjct: 548 GILADEMGLGKTVQSIA-LLAH 568
Score = 53 (23.7 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 20/75 (26%), Positives = 30/75 (40%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD---- 554
G LI+ PA L W E TR P K Y G + L D
Sbjct: 577 GPFLIISPASTLNNWHQEFTRFV-P-KFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFH 634
Query: 555 IVLTTYDVLKEDLSH 569
+V+T+Y ++ +D+ +
Sbjct: 635 VVITSYQLVVQDVKY 649
>UNIPROTKB|H0YMN5 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 PROSITE:PS51413
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AC020661 GO:GO:0016817 ChiTaRS:INO80
HGNC:HGNC:26956 EMBL:AC021753 ProteinModelPortal:H0YMN5 SMR:H0YMN5
Ensembl:ENST00000558357 Bgee:H0YMN5 Uniprot:H0YMN5
Length = 1104
Score = 134 (52.2 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R+ W + LDEAQ ++S+++ ++ L+ ++R +TGTPIQ + +L+ LL F+ +
Sbjct: 643 RVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTL 702
Query: 656 FS----ISRWWIEVIRDPYENG---DVGAMEFTHKFFKEIMCRSSKVHVSDEL 701
F + W+ + I EN D + H K M R K V +EL
Sbjct: 703 FDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENEL 755
Score = 75 (31.5 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKTV+ +A + AH
Sbjct: 539 GILADEMGLGKTVQSIA-LLAH 559
Score = 53 (23.7 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 20/75 (26%), Positives = 30/75 (40%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD---- 554
G LI+ PA L W E TR P K Y G + L D
Sbjct: 568 GPFLIISPASTLNNWHQEFTRFV-P-KFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFH 625
Query: 555 IVLTTYDVLKEDLSH 569
+V+T+Y ++ +D+ +
Sbjct: 626 VVITSYQLVVQDVKY 640
Score = 38 (18.4 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 191 ILKSAFDACESLLENSRKTWKKSMINVMSWLRPEVLTSEARYGVSKSMEMDVELMTRTKN 250
+L+S + L N K KKS WL+ +L+ E+ S+S + D E + ++
Sbjct: 101 VLQSESKCDKGNLYNFSKL-KKSR----KWLKSILLSDESSEADSQSEDDDEEELNLSRE 155
Query: 251 DV 252
++
Sbjct: 156 EL 157
Score = 38 (18.4 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 386 SDDSIFIDTAVQVTDDQKVNLRR 408
SD+S D+ + D++++NL R
Sbjct: 132 SDESSEADSQSEDDDEEELNLSR 154
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 133 (51.9 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ +R +TGTP+Q L +L+ LL FL F
Sbjct: 227 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVF 286
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 287 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKAEV--EKSLPPKKEVKIYLGLS 344
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 345 KMQREWY 351
Score = 69 (29.3 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 128 GILADEMGLGKTLQTIALL 146
Score = 52 (23.4 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
+LLN L++LR+ C HP
Sbjct: 372 RLLNILMQLRKCCNHP 387
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 134 (52.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R+ W + LDEAQ ++S+++ ++ L+ ++R +TGTPIQ + +L+ LL F+ +
Sbjct: 639 RVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTL 698
Query: 656 FS----ISRWWIEVIRDPYENG---DVGAMEFTHKFFKEIMCRSSKVHVSDEL 701
F + W+ + I EN D + H K M R K V +EL
Sbjct: 699 FDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENEL 751
Score = 78 (32.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 360 GILADEMGLGKTVELLACI--FAHRKPASDDSIFIDTAVQVTDDQKVNLRRLKRERVECI 417
GILADEMGLGKTV+ +A + A R+ + I A + + + R + + +V
Sbjct: 541 GILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPY 600
Query: 418 CGAVSESRKYKGLWVQ 433
G + +K K L+ Q
Sbjct: 601 WGNPHDRKKKKTLYTQ 616
Score = 57 (25.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ PA L W E TR P K Y G + ++ ++ +V+T
Sbjct: 570 GPFLIISPASTLNNWHQEFTRFV-P-KFKVLPYWGNPHDRKKKKTLY--TQDAPFHVVIT 625
Query: 559 TYDVLKEDLSH 569
+Y ++ +D+ +
Sbjct: 626 SYQLVVQDVKY 636
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 131 (51.2 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 35/130 (26%), Positives = 63/130 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 315 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 374
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 375 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKVYLGLS 432
Query: 717 PIEEHFYQSQ 726
++ ++ ++
Sbjct: 433 KMQREWWYTK 442
Score = 69 (29.3 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 216 GILADEMGLGKTLQTIALL 234
Score = 55 (24.4 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + DE ++ GK + L KL+ L
Sbjct: 461 RLLNILMQLRKCCNHPYL-FDGAEP--GPPYTTDEHIVSNSGKMVV-----LDKLLAKLK 512
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 513 EQGSRVLIFSQMTRLLDILED 533
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 112 (44.5 bits), Expect = 5.4e-07, Sum P(4) = 5.4e-07
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLY--AKHRWCITGTPIQRKLDDLYGLLR 649
+LL++ W + +DE ++ NA + + Y ++R +TGTP+Q L +L+ LL
Sbjct: 584 SLLSKHDWAHMIIDEGHRMK-NAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLN 642
Query: 650 FLKSSPFSISRWWIEVIRDPYEN-GDVGAMEFT-----------HKFFKEIMCRSSKVHV 697
F+ F+ ++ + + P+ N G +E T HK + + R K V
Sbjct: 643 FVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEV 702
Query: 698 SDELQLPPQEECVSWLTFSPIEEHFYQ 724
E LP + E V S +++ YQ
Sbjct: 703 --EKDLPDKVEKVIKCKLSGLQQQLYQ 727
Score = 74 (31.1 bits), Expect = 5.4e-07, Sum P(4) = 5.4e-07
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G L++ P + W E + P SL T IY+G N S + + D++LT
Sbjct: 520 GPFLVIVPLSTITNWTLEFEKWA-P-SLNTIIYKGTPNQRHSLQHQIRVGNF---DVLLT 574
Query: 559 TYDVLKEDLS 568
TY+ + +D S
Sbjct: 575 TYEYIIKDKS 584
Score = 69 (29.3 bits), Expect = 5.4e-07, Sum P(4) = 5.4e-07
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ I
Sbjct: 491 GILADEMGLGKTIQSISLI 509
Score = 48 (22.0 bits), Expect = 5.4e-07, Sum P(4) = 5.4e-07
Identities = 24/109 (22%), Positives = 46/109 (42%)
Query: 907 KIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDRKXXXXXXXXXXX 966
K + IET EN + S EN+ FT A D + +D R+
Sbjct: 1101 KENEIETL-ENTPEASETSLIENNSFTAAVDEETN-ADKETTASRSKRRSSRKKRTIS-- 1156
Query: 967 XXXLITV--CENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQ 1013
++T EN +++ S + V ++E + S +++ N + ++K+
Sbjct: 1157 ---IVTAEDKENTQEESTSQENGGAKV-EEEVKSSSVEIINGSESKKKK 1201
>UNIPROTKB|D3ZZZ1 [details] [associations]
symbol:Ercc6 "Protein Ercc6" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1311509
GO:GO:0005524 GO:GO:0008630 GO:GO:0005730 GO:GO:0006284
GO:GO:0003677 GO:GO:0009636 GO:GO:0003682 GO:GO:0045494
GO:GO:0010332 GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257
GO:GO:0006283 GO:GO:0008094 GO:GO:0008023 GO:GO:0032786
GO:GO:0006290 GO:GO:0007256 GO:GO:0000303 IPI:IPI00358023
Ensembl:ENSRNOT00000038493 ArrayExpress:D3ZZZ1 Uniprot:D3ZZZ1
Length = 1475
Score = 92 (37.4 bits), Expect = 7.3e-07, Sum P(5) = 7.3e-07
Identities = 32/144 (22%), Positives = 59/144 (40%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRF--- 650
++R W + LDE + + AA T + HR ++G+P+Q L +L+ L F
Sbjct: 629 ISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFTFP 688
Query: 651 --LKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKF-------FKEIMCRSSKVHVSDEL 701
L + P + ++ + + Y N ++ +K + R K V L
Sbjct: 689 GKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSL 748
Query: 702 QLPPQEECVSWLTFSPIEEHFYQS 725
LP + E V + + + YQ+
Sbjct: 749 SLPDKNEQVLFCRLTDEQHKVYQN 772
Score = 76 (31.8 bits), Expect = 7.3e-07, Sum P(5) = 7.3e-07
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTR-PGSLKTCIYEGARNSSLSDTSIMDISELVGADIVL 557
G TLIVCP ++ QW E HT P ++E + + + DI G +++
Sbjct: 561 GPTLIVCPTTVMHQWVKEF--HTWWPPFRVAILHETGSCAHRKERLVRDIVHCHG--VLI 616
Query: 558 TTYDVLKEDLSHDSDRHE 575
T+Y ++ + D RH+
Sbjct: 617 TSYSYIRL-MQDDISRHD 633
Score = 75 (31.5 bits), Expect = 7.3e-07, Sum P(5) = 7.3e-07
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 359 GGILADEMGLGKTVELLA 376
GGIL DEMGLGKT++++A
Sbjct: 521 GGILGDEMGLGKTIQIIA 538
Score = 52 (23.4 bits), Expect = 7.3e-07, Sum P(5) = 7.3e-07
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 979 QKYLSGFSVKLSVAQQ-EFRKSYMQVCN 1005
Q+ L F KLSVAQ FR+ +CN
Sbjct: 1430 QEILQAFESKLSVAQSCVFRELLRNLCN 1457
Score = 51 (23.0 bits), Expect = 7.3e-07, Sum P(5) = 7.3e-07
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 756 SDALYNPIITHAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSP 800
S A+Y I + E ++ + L+ LR+ C HP + S G ++ P
Sbjct: 776 SKAVYR--ILNGEN-QIFSGLVALRKICNHPDLFSGGPKNTSALP 817
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 134 (52.2 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R+ W + LDEAQ ++S+++ ++ L+ ++R +TGTPIQ + +L+ LL F+ +
Sbjct: 648 RVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTL 707
Query: 656 FS----ISRWWIEVIRDPYENG---DVGAMEFTHKFFKEIMCRSSKVHVSDEL 701
F + W+ + I EN D + H K M R K V +EL
Sbjct: 708 FDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENEL 760
Score = 75 (31.5 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKTV+ +A + AH
Sbjct: 544 GILADEMGLGKTVQSIA-LLAH 564
Score = 49 (22.3 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 19/75 (25%), Positives = 29/75 (38%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD---- 554
G LI+ PA L W E R P K Y G + L D
Sbjct: 573 GPFLIISPASTLNNWHQEFARFV-P-KFKVLPYWGNPHDRKVIRKFWSQKTLYTQDAPFH 630
Query: 555 IVLTTYDVLKEDLSH 569
+V+T+Y ++ +D+ +
Sbjct: 631 VVITSYQLVVQDVKY 645
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 111 (44.1 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 34/140 (24%), Positives = 60/140 (42%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L +W + +DE +++ R A ++ +TGTP+Q L +L+ LL FL
Sbjct: 326 LQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLP 385
Query: 654 SPF----SISRWW-IEVIRDPYEN-----GDVGAMEFTHKFFKEIMCRSSKVHVSDELQL 703
F S W+ I + + E+ + + H+ + R K V+ L++
Sbjct: 386 DVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVA--LEV 443
Query: 704 PPQEECVSWLTFSPIEEHFY 723
PP+ E V + +E FY
Sbjct: 444 PPKREVVVYAPLCNKQEIFY 463
Score = 74 (31.1 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKTV+ +A I
Sbjct: 227 GILADEMGLGKTVQCIATI 245
Score = 55 (24.4 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 503 IVC-PAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGA----DIVL 557
+VC P L W AE R T P + T +Y G R + +I + G +V+
Sbjct: 258 LVCGPLSTLPNWMAEFKRFT-P-EIPTLLYHGTREDRRK--LVKNIHKRQGTLQIHPVVV 313
Query: 558 TTYDVLKED 566
T++++ D
Sbjct: 314 TSFEIAMRD 322
Score = 51 (23.0 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGK 813
KL N ++ LR+ C HP + + + Q +DE L+ GK
Sbjct: 542 KLRNIMMLLRKCCNHPYMIEYPIDPVTQE-FKIDEELVTNSGK 583
>UNIPROTKB|E2QSK6 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0032786 "positive regulation of DNA-dependent
transcription, elongation" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0010332 "response to gamma
radiation" evidence=IEA] [GO:0010224 "response to UV-B"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0045494 GO:GO:0010332
GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
GO:GO:0008094 GO:GO:0008023 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
OMA:NGEMQIF GO:GO:0000303 EMBL:AAEX03015368 RefSeq:XP_534944.2
UniGene:Cfa.1909 Ensembl:ENSCAFT00000010674 GeneID:477747
KEGG:cfa:477747 NextBio:20853169 Uniprot:E2QSK6
Length = 1486
Score = 92 (37.4 bits), Expect = 9.5e-07, Sum P(4) = 9.5e-07
Identities = 32/144 (22%), Positives = 59/144 (40%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRF--- 650
++R W + LDE + + AA T + HR ++G+P+Q L +L+ L F
Sbjct: 631 ISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFP 690
Query: 651 --LKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKF-------FKEIMCRSSKVHVSDEL 701
L + P + ++ + + Y N ++ +K + R K V L
Sbjct: 691 GKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSL 750
Query: 702 QLPPQEECVSWLTFSPIEEHFYQS 725
LP + E V + + + YQ+
Sbjct: 751 SLPDKNEQVLFCRLTEEQHKVYQN 774
Score = 81 (33.6 bits), Expect = 9.5e-07, Sum P(4) = 9.5e-07
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTR-PGSLKTCIYEGARNSSLSDTSIMDISELVGADIVL 557
G T+IVCP ++ QW E HT P ++E + + I DI+ G I++
Sbjct: 563 GPTIIVCPTTVMHQWVKEF--HTWWPPFRVAILHETGSYTQKKEKLIRDIAHCHG--ILI 618
Query: 558 TTYDVLKEDLSHDSDRHE 575
T+Y ++ + D RH+
Sbjct: 619 TSYSYIRL-MQDDISRHD 635
Score = 75 (31.5 bits), Expect = 9.5e-07, Sum P(4) = 9.5e-07
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 359 GGILADEMGLGKTVELLA 376
GGIL DEMGLGKT++++A
Sbjct: 523 GGILGDEMGLGKTIQIIA 540
Score = 55 (24.4 bits), Expect = 9.5e-07, Sum P(4) = 9.5e-07
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSP 800
++ + L+ LR+ C HP + S G ++L+ P
Sbjct: 790 QIFSGLVALRKICNHPDLFSGGPKNLKTIP 819
>UNIPROTKB|H9L0N0 [details] [associations]
symbol:H9L0N0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02032856 EMBL:AADN02032857
EMBL:AADN02032858 EMBL:AADN02032859 EMBL:AADN02032860
EMBL:AADN02032861 EMBL:AADN02032862 EMBL:AADN02032863
EMBL:AADN02032864 EMBL:AADN02032865 Ensembl:ENSGALT00000023599
Uniprot:H9L0N0
Length = 1444
Score = 122 (48.0 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W I +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+ FS
Sbjct: 283 WVFIGIDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS- 341
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPI 718
W E + + G HK + + R K V E LP + E + + S +
Sbjct: 342 -SW--EDFEEEHGKGREFGYASLHKELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSAL 396
Query: 719 EEHFYQ 724
++ +Y+
Sbjct: 397 QKQYYK 402
Score = 66 (28.3 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W EI T + +Y G +RN + + ++ + +I
Sbjct: 206 GPFLLVVPLSTLTSWQREI--QTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNI 263
Query: 556 VLTTYDVLKEDLS 568
+LTTY++L +D S
Sbjct: 264 LLTTYEILLKDKS 276
Score = 61 (26.5 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 178 ILADEMGLGKTIQTIS 193
Score = 52 (23.4 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 880 ILPMVANCATELSQNEQHFPGCSE-KAFKIHSIETCDENARKCQR-----VSREENSDFT 933
+LP + NCA ++S N CS + + ++ E R +R + RE F+
Sbjct: 745 MLPRMRNCAKQISFNGNE-GRCSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFS 803
Query: 934 DAE 936
DAE
Sbjct: 804 DAE 806
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 123 (48.4 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ + + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 163 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 222
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
S F E ++D GD+ E K K +M R K V E L P++E +
Sbjct: 223 SQFPSES---EFLKD---FGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKNLAPKQETI 274
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 275 IEVELTNIQKKYYRA 289
Score = 63 (27.2 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ +A
Sbjct: 59 ILADEMGLGKTIQSIA 74
Score = 57 (25.1 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 766 HAEAAKLLNSLLKLRQACCHP 786
H LLN++++LR+ C HP
Sbjct: 304 HTNMPNLLNTMMELRKCCNHP 324
Score = 48 (22.0 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G L++ P + W+ E T + T +Y G+
Sbjct: 86 GPFLVIAPLSTITNWEREFNTWTE---MNTIVYHGS 118
>UNIPROTKB|H7C2W2 [details] [associations]
symbol:SHPRH "E3 ubiquitin-protein ligase SHPRH"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 EMBL:AL356599
EMBL:AL451145 HGNC:HGNC:19336 Ensembl:ENST00000433355 Bgee:H7C2W2
Uniprot:H7C2W2
Length = 449
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 37/101 (36%), Positives = 52/101 (51%)
Query: 291 RPYQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSP 350
RPYQR A WM+Q+E + + + L L+YNP++G +
Sbjct: 283 RPYQREAVNWMLQQECFRSSPATESALHFLWREI-VTSEGLK----LYYNPYTGCIIREY 337
Query: 351 DYTSSYVFGGILADEMGLGKTVELLACIFAH-RKPASDDSI 390
+ + GGILADEMGLGKTVE+LA I H R+ D++
Sbjct: 338 PNSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDAL 378
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 140 (54.3 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 56/238 (23%), Positives = 103/238 (43%)
Query: 562 VLKEDLSHDSDRHEGDRRFMRFQKRYPVIPT---LLTRIFWWRICLDEAQMVESNAAAAT 618
VL++ + R+ + F Y ++ T L ++ W + LDEAQ ++S+ ++
Sbjct: 795 VLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRW 854
Query: 619 EMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS----ISRWWIEVIRDPYE-NG 673
+ L + ++R +TGTPIQ + +L+ LL F+ S F + W+ + I E N
Sbjct: 855 KNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANT 914
Query: 674 DVGAMEFT--HKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQS-QHETC 730
+ + H K M R K +V EL + + + LT + YQ + +
Sbjct: 915 KLNQQQLRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQR--QAKLYQVLKSQIS 972
Query: 731 VGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCHPQV 788
Y + I+ N N ++ SD L+N++++ R+ C HP +
Sbjct: 973 TNY--DAIENAATNDSTSNSASNSGSDQ------------NLINAVMQFRKVCNHPDL 1016
Score = 73 (30.8 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 15/22 (68%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKTV+ ++ + AH
Sbjct: 727 GILADEMGLGKTVQSIS-VLAH 747
Score = 45 (20.9 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 30 QKPHGSEQPEKEELADVDHPFF 51
++ +G E E+EE+ D+D F
Sbjct: 254 EEENGEEDEEEEEIEDLDEEDF 275
Score = 42 (19.8 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 499 GATLIVCPAPILAQWDAEITR 519
G L+V PA L W EI++
Sbjct: 756 GPFLVVTPASTLHNWVNEISK 776
>MGI|MGI:2444036 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
Pfam:PF00176 MGI:MGI:2444036 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AC136146 EMBL:AC122417 IPI:IPI00988884
ProteinModelPortal:E9Q9V7 SMR:E9Q9V7 Ensembl:ENSMUST00000066582
OMA:VIQDHQA Bgee:E9Q9V7 Uniprot:E9Q9V7
Length = 936
Score = 120 (47.3 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 600 WR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
WR + LDEAQ +++ + + L ++ R +TGTP+Q L +L+ L+ FL F
Sbjct: 732 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQS 791
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECV 710
R + E +P G+ E+ HK + + R KV V E Q+P + E V
Sbjct: 792 HREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDV--EKQMPKKYEHV 848
Score = 72 (30.4 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ ++ + AH
Sbjct: 631 GILADEMGLGKTIQTIS-LLAH 651
Score = 54 (24.1 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGAR 535
G LI+ P ++ W+ E+ R P S K Y GA+
Sbjct: 660 GPHLIIVPTSVMLNWEMELKRWC-P-SFKILTYYGAQ 694
Score = 46 (21.3 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 772 LLNSLLKLRQACCHPQV 788
++N L++LR+ C HP +
Sbjct: 882 VINILMQLRKVCNHPNL 898
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 122 (48.0 bits), Expect = 1.2e-06, Sum P(5) = 1.2e-06
Identities = 42/143 (29%), Positives = 66/143 (46%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
LL +I W + +DE ++++ T M + A+HR +TGTP+Q KL +L+ LL FL
Sbjct: 648 LLGKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFL 707
Query: 652 KSSPFS----ISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
S FS +W+ E ++ E HK + + R K V E
Sbjct: 708 LPSIFSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEV--ES 765
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S +++ Y+
Sbjct: 766 QLPDKTEYVIKCDQSALQKVIYR 788
Score = 69 (29.3 bits), Expect = 1.2e-06, Sum P(5) = 1.2e-06
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 554 GILADEMGLGKTIQTISLV 572
Score = 62 (26.9 bits), Expect = 1.2e-06, Sum P(5) = 1.2e-06
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGA-DIVL 557
G L++ P L+ W E + P S+ T IY+G +++ I + GA ++++
Sbjct: 583 GPYLVIVPLSTLSNWQNEFAKWA-P-SVTTIIYKGTKDARRRVEG--QIRK--GAFNVLM 636
Query: 558 TTYD-VLKE 565
TTY+ V+KE
Sbjct: 637 TTYEYVIKE 645
Score = 50 (22.7 bits), Expect = 1.2e-06, Sum P(5) = 1.2e-06
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 736 EVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQACCHP 786
E + + + L++ + H L + ++ A L+N+++ LR+ C HP
Sbjct: 772 EYVIKCDQSALQKVIYRHMQKGLLLDAKMSSG-ARSLMNTVVHLRKLCNHP 821
Score = 39 (18.8 bits), Expect = 1.2e-06, Sum P(5) = 1.2e-06
Identities = 14/85 (16%), Positives = 31/85 (36%)
Query: 221 LRPEVLTSEARYGVSKSMEMDVELMTRTKNDVSASQKHASFDVARFYEA---IKRSKAEP 277
+ PE + G+ + + + ++ + +N+ + +A +Y IK +
Sbjct: 462 VEPEEEKDDQYAGMDEETKAKM-ILEKARNEEDEYDQKTKKQMADYYATAHKIKEKVVKQ 520
Query: 278 MXXXXXXXXXXXXRPYQRRAAYWMV 302
+PYQ + WMV
Sbjct: 521 HTTMGGGDPNLLLKPYQIKGLEWMV 545
>UNIPROTKB|G3N326 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:DAAA02057908
Ensembl:ENSBTAT00000063921 Uniprot:G3N326
Length = 934
Score = 123 (48.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 57/207 (27%), Positives = 84/207 (40%)
Query: 600 WR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
WR + LDEAQ +++ + + L ++ R +TGTP+Q L +L+ L+ FL F
Sbjct: 730 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQS 789
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
R + E +P G+ E+ HK + + R KV V E Q+P + E V
Sbjct: 790 HREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDV--EKQMPKKYEHVI 847
Query: 712 WLTFSPIEEHFYQ------SQHET-CVGYAREVIQRLKDNILKRNVPGHASSDALYNPII 764
S + Y + ET G+ VI L N P + +P I
Sbjct: 848 RCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRKVCNHPNLFDPRPVTSPFI 907
Query: 765 THAEAAKLLNSLLKLRQACCHP-QVGS 790
T + L LR HP QV S
Sbjct: 908 TPGICFSTAS--LVLRATDVHPLQVSS 932
Score = 72 (30.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ ++ + AH
Sbjct: 629 GILADEMGLGKTIQTIS-LLAH 649
Score = 54 (24.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGAR 535
G LI+ P ++ W+ E+ R P S K Y GA+
Sbjct: 658 GPHLIIVPTSVMLNWEMELKRWC-P-SFKILTYYGAQ 692
>TAIR|locus:2196115 [details] [associations]
symbol:AT1G02670 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA repair"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K15083 IPI:IPI00540835
RefSeq:NP_171767.1 UniGene:At.51462 ProteinModelPortal:F4HXL1
SMR:F4HXL1 PRIDE:F4HXL1 EnsemblPlants:AT1G02670.1 GeneID:839532
KEGG:ath:AT1G02670 OMA:THITFAR Uniprot:F4HXL1
Length = 678
Score = 117 (46.2 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 546 DISELVGADIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLD 605
++ +L+ D VLTT +++ + D EG M P L I W RI +D
Sbjct: 230 NVQKLMNYDFVLTTSPIVENEYRKD----EGVDETMS--------P--LHSIKWNRIIVD 275
Query: 606 EAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRF 650
EA +++ ++ + L A +RW ++GTP+Q +D+LY L+ +
Sbjct: 276 EAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSLVSY 320
Score = 103 (41.3 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 489 IEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDIS 548
++ S A G TL++ P L+QW EI+R T PGS + Y G + ++
Sbjct: 180 VDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDK-------NVQ 232
Query: 549 ELVGADIVLTTYDVLKEDLSHD 570
+L+ D VLTT +++ + D
Sbjct: 233 KLMNYDFVLTTSPIVENEYRKD 254
Score = 86 (35.3 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 355 SYVFGGILADEMGLGKTVELLACIFAHRK 383
S V GGILADEMG+GKT++ ++ + A R+
Sbjct: 151 SAVRGGILADEMGMGKTIQAISLVLARRE 179
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 770 AKLLNSLLKLRQACCHPQVGS 790
A + L++LRQA HP + S
Sbjct: 421 AHIFGLLIRLRQAVDHPYLVS 441
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 138 (53.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/150 (27%), Positives = 71/150 (47%)
Query: 562 VLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLT---RIFWWRICLDEAQMVESNAAAAT 618
+L++ S R++ D F Y +I + ++ W + LDEAQ ++S++++
Sbjct: 761 ILRKFWDRKSLRYDKDSPFHVLVTSYQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRW 820
Query: 619 EMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS----ISRWWIEVIRDPYENG- 673
+ L L ++R +TGTPIQ + +L+ LL F+ S F S W+ + I ++
Sbjct: 821 KSLLNLTCRNRLLLTGTPIQNSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNT 880
Query: 674 --DVGAMEFTHKFFKEIMCRSSKVHVSDEL 701
D + H K M R K +V EL
Sbjct: 881 SLDEQQLRRLHMILKPFMLRRIKKNVQSEL 910
Score = 68 (29.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKTV+ ++ +
Sbjct: 693 GILADEMGLGKTVQSISVL 711
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 121 (47.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W I +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+ FS
Sbjct: 606 WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS- 664
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPI 718
W E + + G HK + + R K V E LP + E + + S +
Sbjct: 665 -SW--EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSAL 719
Query: 719 EEHFYQ 724
++ +Y+
Sbjct: 720 QKQYYK 725
Score = 66 (28.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W EI T + +Y G +RN + + ++ + +I
Sbjct: 529 GPFLLVVPLSTLTSWQREI--QTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNI 586
Query: 556 VLTTYDVLKED 566
+LTTY++L +D
Sbjct: 587 LLTTYEILLKD 597
Score = 61 (26.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 501 ILADEMGLGKTIQTIS 516
Score = 38 (18.4 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPV 496
K+ +R++ N+ ++ E + D+L+E V
Sbjct: 227 KRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDV 261
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 134 (52.2 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R+ W + LDEAQ ++S+++ ++ L+ ++R +TGTPIQ + +L+ LL F+ +
Sbjct: 643 RVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTL 702
Query: 656 FS----ISRWWIEVIRDPYENG---DVGAMEFTHKFFKEIMCRSSKVHVSDEL 701
F + W+ + I EN D + H K M R K V +EL
Sbjct: 703 FDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENEL 755
Score = 75 (31.5 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKTV+ +A + AH
Sbjct: 539 GILADEMGLGKTVQSIA-LLAH 559
Score = 53 (23.7 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 20/75 (26%), Positives = 30/75 (40%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD---- 554
G LI+ PA L W E TR P K Y G + L D
Sbjct: 568 GPFLIISPASTLNNWHQEFTRFV-P-KFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFH 625
Query: 555 IVLTTYDVLKEDLSH 569
+V+T+Y ++ +D+ +
Sbjct: 626 VVITSYQLVVQDVKY 640
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 191 ILKSAFDACESLLENSRKTWKKSMINVMSWLRPEVLTSEARYGVSKSMEMDVELMTRTKN 250
+L+S + L N K KKS WL+ +L+ E+ S+S + D E + ++
Sbjct: 101 VLQSESKCDKGNLYNFSKL-KKSR----KWLKSILLSDESSEADSQSEDDDEEELNLSRE 155
Query: 251 DV 252
++
Sbjct: 156 EL 157
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 134 (52.2 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 55/239 (23%), Positives = 107/239 (44%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
R+ W + LDE ++++ + + +H +TGTP+Q + +L+ +L FL
Sbjct: 1019 RVPWRALILDEGHRIKNDKSKVLSKLKSIKTEHSIILTGTPLQNDMKELWTMLNFLDPDK 1078
Query: 656 FSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTF 715
F+ + +++ D E V + H+ + R K V EL +P +EE V +
Sbjct: 1079 FNSCQEFLDEYSDLKEESQVSKL---HQLLSPYLLRRMKEDV--ELSIPIKEETVIQVEL 1133
Query: 716 SPIEEHFYQSQHETCVGYAREVIQR-LKDNILKRNVPGHASSDALYNPIITHAEAAK-LL 773
S ++ +Y++ E RE + R +K K N+P ++ + H
Sbjct: 1134 SSTQKTYYRAILER----NREFLSRGIKQ---KTNLPKLSNIMIQIRKVCNHPFLIPGAE 1186
Query: 774 NSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEAL--RKLVMALN 830
S++K + ++G ++S + L +D++L L K EG + L ++V +LN
Sbjct: 1187 ESIVKQEKIAGDEELGELLVKSSSKLVL-VDKLLQRL----KAEGHQVLIFSQMVESLN 1240
Score = 68 (29.0 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSS--LSDTSIMDISELVGADIV 556
G L+V P L W EI + T+ +KT ++ G++ + +S + +++
Sbjct: 948 GPFLVVAPLSTLGNWHKEILKWTK---MKTLVFYGSQETRGFISKYEFKHKDTYL-FEVL 1003
Query: 557 LTTYDVLKEDLS 568
LTTY+ + D S
Sbjct: 1004 LTTYETIMSDHS 1015
Score = 62 (26.9 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 344 GSLSLSPDYTSSYVFGGILADEMGLGKTVELLA 376
G L LS Y + +LADEMGLGKT++ +A
Sbjct: 905 GFLWLS--YCWYHCRSSLLADEMGLGKTIQSIA 935
Score = 47 (21.6 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 18/100 (18%), Positives = 41/100 (41%)
Query: 915 DENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDRKXXXXXXXXXXXXXXLITVC 974
D+N S + N+D D++ + + + S N ++ + V
Sbjct: 2265 DQNNNNNNNNSNQNNTDNIDSDSGNNNNQNSSTNQ-QQQQQQSEKIPSSESLRRRIQKVT 2323
Query: 975 ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQY 1014
+ + +K S +K +AQQ+ + +Q + +EK++
Sbjct: 2324 DQILKKEHSDMIMKQHMAQQKLHQLQLQQ-QMKEQKEKEF 2362
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 130 (50.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ +R +TGTP+Q L +L+ LL FL F
Sbjct: 285 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVF 344
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ S + GD +E H + + R K V E LPP++E ++ S
Sbjct: 345 NSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADV--EKSLPPKKEVKIYVGLS 402
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 403 KMQREWY 409
Score = 66 (28.3 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 186 GILADEMGLGKTLQTISLL 204
Score = 52 (23.4 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
+LLN L++LR+ C HP
Sbjct: 430 RLLNILMQLRKCCNHP 445
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 133 (51.9 bits), Expect = 2.2e-06, Sum P(4) = 2.2e-06
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
++ W + LDEAQ ++S+ ++ + L + ++R +TGTPIQ + +L+ LL F+ +
Sbjct: 924 KVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPTL 983
Query: 656 FS----ISRWWIEVIRDPYENG---DVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEE 708
F S W+ + I ++ + + H K M R K HV EL +++
Sbjct: 984 FDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQELGDKVEKD 1043
Query: 709 CVSWLTF 715
LT+
Sbjct: 1044 VFCDLTY 1050
Score = 66 (28.3 bits), Expect = 2.2e-06, Sum P(4) = 2.2e-06
Identities = 12/17 (70%), Positives = 16/17 (94%)
Query: 360 GILADEMGLGKTVELLA 376
GILADEMGLGKT++ ++
Sbjct: 819 GILADEMGLGKTIQSIS 835
Score = 52 (23.4 bits), Expect = 2.2e-06, Sum P(4) = 2.2e-06
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG 533
G L++ PA L W EIT+ P ++K Y G
Sbjct: 848 GPFLVIAPASTLHNWQQEITKFV-P-NIKVLPYWG 880
Score = 48 (22.0 bits), Expect = 2.2e-06, Sum P(4) = 2.2e-06
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 768 EAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSM 803
++ L+N +++ R+ C HP + R+ +SP S+
Sbjct: 1079 DSTTLMNLVMQFRKVCNHPDLFE---RAETKSPFSL 1111
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 121 (47.7 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W I +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+ FS
Sbjct: 607 WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS- 665
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPI 718
W E + + G HK + + R K V E LP + E + + S +
Sbjct: 666 -SW--EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSAL 720
Query: 719 EEHFYQ 724
++ +Y+
Sbjct: 721 QKQYYK 726
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W EI T + +Y G +RN + + ++ + +I
Sbjct: 530 GPFLLVVPLSTLTSWQREI--QTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNI 587
Query: 556 VLTTYDVLKED 566
+LTTY++L +D
Sbjct: 588 LLTTYEILLKD 598
Score = 61 (26.5 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 502 ILADEMGLGKTIQTIS 517
Score = 52 (23.4 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 880 ILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQR-----VSREENSDFTD 934
+LP + NCA ++S N + + ++ E R +R + RE F+D
Sbjct: 1068 MLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSD 1127
Query: 935 AE 936
AE
Sbjct: 1128 AE 1129
Score = 38 (18.4 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPV 496
K+ +R++ N+ ++ E + D+L+E V
Sbjct: 228 KRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDV 262
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 121 (47.7 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W I +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+ FS
Sbjct: 606 WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS- 664
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPI 718
W E + + G HK + + R K V E LP + E + + S +
Sbjct: 665 -SW--EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSAL 719
Query: 719 EEHFYQ 724
++ +Y+
Sbjct: 720 QKQYYK 725
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W EI T + +Y G +RN + + ++ + +I
Sbjct: 529 GPFLLVVPLSTLTSWQREI--QTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNI 586
Query: 556 VLTTYDVLKED 566
+LTTY++L +D
Sbjct: 587 LLTTYEILLKD 597
Score = 61 (26.5 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 501 ILADEMGLGKTIQTIS 516
Score = 52 (23.4 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 880 ILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQR-----VSREENSDFTD 934
+LP + NCA ++S N + + ++ E R +R + RE F+D
Sbjct: 1067 MLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSD 1126
Query: 935 AE 936
AE
Sbjct: 1127 AE 1128
Score = 38 (18.4 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPV 496
K+ +R++ N+ ++ E + D+L+E V
Sbjct: 227 KRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDV 261
>UNIPROTKB|F1NCD0 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00590000083118 EMBL:AADN02013166
IPI:IPI00572933 Ensembl:ENSGALT00000006172 OMA:DYKEFVW
Uniprot:F1NCD0
Length = 560
Score = 96 (38.9 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRF 650
W I LDEA ++ + T+ + AKHR +TGTP+Q L +++ L F
Sbjct: 206 WDYIILDEAHKIKCPSNKTTKCVYAIPAKHRLLLTGTPLQNNLQEMWSLFDF 257
Score = 76 (31.8 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 13/18 (72%), Positives = 18/18 (100%)
Query: 359 GGILADEMGLGKTVELLA 376
GGILAD+MGLGKT++++A
Sbjct: 101 GGILADDMGLGKTIQIIA 118
Score = 57 (25.1 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 502 LIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTYD 561
L++ P +++ W AE R T PG L+ + G + + ++ I G IV+T+Y
Sbjct: 133 LLIMPTTLVSSWLAEFARWT-PG-LRVKEFHGTSKTERT-RNLEKIQRKNG--IVITSYQ 187
Query: 562 VL 563
+L
Sbjct: 188 ML 189
Score = 50 (22.7 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 10/48 (20%), Positives = 25/48 (52%)
Query: 703 LPPQEECVSWLTFSPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNV 750
L + + V W+ +P++E Y++ C+ + +EV+ + + + V
Sbjct: 344 LTRKNDFVVWVYLAPVQEKIYRNF--LCLDHVKEVLTTTRSPLAELTV 389
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 121 (47.7 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W I +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+ FS
Sbjct: 590 WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS- 648
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPI 718
W E + + G HK + + R K V E LP + E + + S +
Sbjct: 649 -SW--EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSAL 703
Query: 719 EEHFYQ 724
++ +Y+
Sbjct: 704 QKQYYK 709
Score = 66 (28.3 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W EI T + +Y G +RN + + ++ + +I
Sbjct: 513 GPFLLVVPLSTLTSWQREI--QTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNI 570
Query: 556 VLTTYDVLKED 566
+LTTY++L +D
Sbjct: 571 LLTTYEILLKD 581
Score = 61 (26.5 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 485 ILADEMGLGKTIQTIS 500
Score = 52 (23.4 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 880 ILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQR-----VSREENSDFTD 934
+LP + NCA ++S N + + ++ E R +R + RE F+D
Sbjct: 1051 MLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSD 1110
Query: 935 AE 936
AE
Sbjct: 1111 AE 1112
Score = 38 (18.4 bits), Expect = 0.00047, Sum P(4) = 0.00047
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPV 496
K+ +R++ N+ ++ E + D+L+E V
Sbjct: 211 KRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDV 245
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 121 (47.7 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W I +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+ FS
Sbjct: 602 WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS- 660
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPI 718
W E + + G HK + + R K V E LP + E + + S +
Sbjct: 661 -SW--EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSAL 715
Query: 719 EEHFYQ 724
++ +Y+
Sbjct: 716 QKQYYK 721
Score = 66 (28.3 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W EI T + +Y G +RN + + ++ + +I
Sbjct: 525 GPFLLVVPLSTLTSWQREI--QTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNI 582
Query: 556 VLTTYDVLKED 566
+LTTY++L +D
Sbjct: 583 LLTTYEILLKD 593
Score = 61 (26.5 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 497 ILADEMGLGKTIQTIS 512
Score = 52 (23.4 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 880 ILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQR-----VSREENSDFTD 934
+LP + NCA ++S N + + ++ E R +R + RE F+D
Sbjct: 1063 MLPRMRNCAKQISFNGSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSD 1122
Query: 935 AE 936
AE
Sbjct: 1123 AE 1124
Score = 38 (18.4 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPV 496
K+ +R++ N+ ++ E + D+L+E V
Sbjct: 223 KRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDV 257
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 133 (51.9 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 596 RIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSP 655
RI W + LDEAQ ++S A+ ++ L ++R ++GTPIQ + +L+ LL F+ +
Sbjct: 660 RIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTL 719
Query: 656 FS----ISRWWIEVIRDPYEN--G-DVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEE 708
F + W+ + I EN G D + H K M R K V +EL +
Sbjct: 720 FDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELS-----D 774
Query: 709 CVSWLTFSPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAE 768
+ + + P+ + + ++ I R++D + H +S + + +
Sbjct: 775 KIEIMVYCPLT-----IRQKLLYRALKQKI-RIEDLL-------HLTSGSTTTS--SSSS 819
Query: 769 AAKLLNSLLKLRQACCHPQV 788
A+ L+N +++ R+ C HP++
Sbjct: 820 ASNLMNLVMQFRKVCNHPEL 839
Score = 75 (31.5 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 360 GILADEMGLGKTVELLA--CIFAHRKPASDDSIFIDTAVQVTDDQKVNLRRLKRERVECI 417
GILADEMGLGKTV+ +A C A + I A + + Q+ R + +V
Sbjct: 556 GILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVPY 615
Query: 418 CGAVSESRKYKGLWVQ 433
G+ +E + + W Q
Sbjct: 616 WGSPAERKILRQFWDQ 631
Score = 51 (23.0 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 19/75 (25%), Positives = 30/75 (40%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD---- 554
G L++ PA L W E++R P K Y G+ D L D
Sbjct: 585 GPFLVISPASTLHNWQQEMSRFV-P-DFKVVPYWGSPAERKILRQFWDQKHLHTRDASFH 642
Query: 555 IVLTTYDVLKEDLSH 569
+V+T+Y ++ D +
Sbjct: 643 VVITSYQLVVSDYKY 657
Score = 45 (20.9 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 231 RYGVSKSMEMDVELMTRTKNDVSASQKHASFDVARFYEAIKR 272
R +S E D E + + ++DV S ++ V R ++ KR
Sbjct: 43 RKPLSSDEETDDEHVVKREHDVQDSDDSSTVGVVRMKQSSKR 84
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 121 (47.7 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W I +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+ FS
Sbjct: 602 WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS- 660
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPI 718
W E + + G HK + + R K V E LP + E + + S +
Sbjct: 661 -SW--EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSAL 715
Query: 719 EEHFYQ 724
++ +Y+
Sbjct: 716 QKQYYK 721
Score = 66 (28.3 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W EI T + +Y G +RN + + ++ + +I
Sbjct: 525 GPFLLVVPLSTLTSWQREI--QTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNI 582
Query: 556 VLTTYDVLKED 566
+LTTY++L +D
Sbjct: 583 LLTTYEILLKD 593
Score = 61 (26.5 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 497 ILADEMGLGKTIQTIS 512
Score = 52 (23.4 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 880 ILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQR-----VSREENSDFTD 934
+LP + NCA ++S N + + ++ E R +R + RE F+D
Sbjct: 1063 MLPRMRNCAKQISFNGSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSD 1122
Query: 935 AE 936
AE
Sbjct: 1123 AE 1124
Score = 38 (18.4 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPV 496
K+ +R++ N+ ++ E + D+L+E V
Sbjct: 223 KRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDV 257
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 121 (47.7 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W I +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+ FS
Sbjct: 603 WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS- 661
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPI 718
W E + + G HK + + R K V E LP + E + + S +
Sbjct: 662 -SW--EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSAL 716
Query: 719 EEHFYQ 724
++ +Y+
Sbjct: 717 QKQYYK 722
Score = 66 (28.3 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W EI T + +Y G +RN + + ++ + +I
Sbjct: 526 GPFLLVVPLSTLTSWQREI--QTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNI 583
Query: 556 VLTTYDVLKED 566
+LTTY++L +D
Sbjct: 584 LLTTYEILLKD 594
Score = 61 (26.5 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 498 ILADEMGLGKTIQTIS 513
Score = 52 (23.4 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 880 ILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQR-----VSREENSDFTD 934
+LP + NCA ++S N + + ++ E R +R + RE F+D
Sbjct: 1064 MLPRMRNCAKQISFNGSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSD 1123
Query: 935 AE 936
AE
Sbjct: 1124 AE 1125
Score = 38 (18.4 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPV 496
K+ +R++ N+ ++ E + D+L+E V
Sbjct: 224 KRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDV 258
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 110 (43.8 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 33/131 (25%), Positives = 63/131 (48%)
Query: 599 W-WRICL-DEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
W W+I + DEA +++ + + R +TGTPIQ L ++Y LL F++ S F
Sbjct: 155 WKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSVF 214
Query: 657 SISRWWIEVIRDPYEN--GDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLT 714
+E + Y + + ++ H+ + + R K V+ EL P + E V +
Sbjct: 215 LPEA--VEDFVNAYADIQTEPALVDELHQVLQPFLLRRVKAEVAAEL--PKKTELVVFHG 270
Query: 715 FSPIEEHFYQS 725
S +++ +Y++
Sbjct: 271 LSALQKRYYKA 281
Score = 71 (30.1 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 482 CQWCDELIEATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSD 541
CQ L A S G L++CP +L W E+ R P SL Y G + ++
Sbjct: 68 CQTISLLAYARGSLKMNGPFLVLCPLAVLENWRQELERFC-P-SLSVICYTGDKEKR-AE 124
Query: 542 TSIMDISELVGADIVLTTYDVLKED 566
++ ++LTTY++ +D
Sbjct: 125 LQ-QNLKSDPRFHVLLTTYEMCLKD 148
Score = 57 (25.1 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 359 GGILADEMGLGKTVELLACI 378
G IL DEMGLGKT + ++ +
Sbjct: 55 GCILGDEMGLGKTCQTISLL 74
Score = 52 (23.4 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKI 816
+LLN L++LR+ HP + ++ P M E L+ GK +
Sbjct: 299 RLLNVLMQLRKCVDHPYL----FDGVEPEPFEMGEHLVEASGKLSL 340
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 121 (47.7 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W I +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+ FS
Sbjct: 620 WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS- 678
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPI 718
W E + + G HK + + R K V E LP + E + + S +
Sbjct: 679 -SW--EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSAL 733
Query: 719 EEHFYQ 724
++ +Y+
Sbjct: 734 QKQYYK 739
Score = 66 (28.3 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W EI T + +Y G +RN + + ++ + +I
Sbjct: 543 GPFLLVVPLSTLTSWQREI--QTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNI 600
Query: 556 VLTTYDVLKED 566
+LTTY++L +D
Sbjct: 601 LLTTYEILLKD 611
Score = 61 (26.5 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 515 ILADEMGLGKTIQTIS 530
Score = 52 (23.4 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 880 ILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQR-----VSREENSDFTD 934
+LP + NCA ++S N + + ++ E R +R + RE F+D
Sbjct: 1081 MLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSD 1140
Query: 935 AE 936
AE
Sbjct: 1141 AE 1142
Score = 38 (18.4 bits), Expect = 0.00049, Sum P(4) = 0.00049
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPV 496
K+ +R++ N+ ++ E + D+L+E V
Sbjct: 228 KRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDV 262
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 121 (47.7 bits), Expect = 3.2e-06, Sum P(4) = 3.2e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W I +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+ FS
Sbjct: 604 WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS- 662
Query: 659 SRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPI 718
W E + + G HK + + R K V E LP + E + + S +
Sbjct: 663 -SW--EDFEEEHGKGREYGYASLHKELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSAL 717
Query: 719 EEHFYQ 724
++ +Y+
Sbjct: 718 QKQYYK 723
Score = 66 (28.3 bits), Expect = 3.2e-06, Sum P(4) = 3.2e-06
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W EI T + +Y G +RN + + ++ + +I
Sbjct: 527 GPFLLVVPLSTLTSWQREI--QTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNI 584
Query: 556 VLTTYDVLKEDLS 568
+LTTY++L +D S
Sbjct: 585 LLTTYEILLKDKS 597
Score = 61 (26.5 bits), Expect = 3.2e-06, Sum P(4) = 3.2e-06
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 499 ILADEMGLGKTIQTIS 514
Score = 51 (23.0 bits), Expect = 3.2e-06, Sum P(4) = 3.2e-06
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 880 ILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQR-----VSREENSDFTD 934
+LP + NCA ++S N + + ++ E R +R + RE F+D
Sbjct: 1065 MLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSITERKRPKKRGRPRTIPRENIKGFSD 1124
Query: 935 AE 936
AE
Sbjct: 1125 AE 1126
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 124 (48.7 bits), Expect = 4.1e-06, Sum P(4) = 4.1e-06
Identities = 44/166 (26%), Positives = 74/166 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLYA-KHRWCITGTPIQRKLDDLYGLLRFL 651
LL+RI W + +DE +++ + T Y+ ++R +TGTP+Q L +L+ LL F+
Sbjct: 532 LLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFV 591
Query: 652 KSSPFSISRWWIEVIRDPYEN-GDVGAMEFT-----------HKFFKEIMCRSSKVHVSD 699
F+ + + E P+ N G ME T HK + + R K V
Sbjct: 592 LPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDV-- 649
Query: 700 ELQLPPQEECVSWLTFSPIEEHFYQSQHETCVGYAREVIQRLKDNI 745
E +LP + E V S +++ Y + + Y + +R K I
Sbjct: 650 EAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDA-KRGKTGI 694
Score = 70 (29.7 bits), Expect = 4.1e-06, Sum P(4) = 4.1e-06
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ I
Sbjct: 438 GILADEMGLGKTIQTISLI 456
Score = 50 (22.7 bits), Expect = 4.1e-06, Sum P(4) = 4.1e-06
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 772 LLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKI 816
L N++++L++ C HP V RS+ + + D +L + GK ++
Sbjct: 697 LQNTVMQLKKICNHPFVFEDVERSIDPTGFNYD-MLWRVSGKFEL 740
Score = 47 (21.6 bits), Expect = 4.1e-06, Sum P(4) = 4.1e-06
Identities = 17/68 (25%), Positives = 29/68 (42%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G L++ P L W E R P +K +Y+G + + S ++LT
Sbjct: 467 GPFLVIVPLSTLTNWTMEFERWA-PSIVKI-VYKGPPQVRKALHPQVRHSNF---QVLLT 521
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 522 TYEYIIKD 529
>UNIPROTKB|E1BYA8 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000303 "response to superoxide" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006290 "pyrimidine dimer
repair" evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010332 "response to gamma radiation" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
EMBL:AADN02027759 EMBL:AADN02027760 IPI:IPI00592927
Ensembl:ENSGALT00000010107 Uniprot:E1BYA8
Length = 1498
Score = 94 (38.1 bits), Expect = 4.6e-06, Sum P(4) = 4.6e-06
Identities = 31/139 (22%), Positives = 56/139 (40%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRF-----LKS 653
W + LDE + + AA T + HR ++G+P+Q L +L+ L F L +
Sbjct: 635 WHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGT 694
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF-------FKEIMCRSSKVHVSDELQLPPQ 706
P + ++ + + Y N ++ +K + R K V L LP +
Sbjct: 695 LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDAINPYLLRRMKADVKMSLSLPDK 754
Query: 707 EECVSWLTFSPIEEHFYQS 725
E V + + + YQ+
Sbjct: 755 NEQVLFCRLTDEQRQVYQN 773
Score = 78 (32.5 bits), Expect = 4.6e-06, Sum P(4) = 4.6e-06
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD-IVL 557
G T+IVCPA ++ QW E HT + I S ++ + I E+ I++
Sbjct: 562 GPTVIVCPATVMHQWVKEF--HTWWPPFRVAILH--ETGSYTNKKVKLIREIASCHGILI 617
Query: 558 TTYDVLK--EDLSHDSDRH 574
T+Y ++ +D H D H
Sbjct: 618 TSYSYIRLMQDNIHSYDWH 636
Score = 75 (31.5 bits), Expect = 4.6e-06, Sum P(4) = 4.6e-06
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 359 GGILADEMGLGKTVELLA 376
GGIL DEMGLGKT++++A
Sbjct: 522 GGILGDEMGLGKTIQIIA 539
Score = 49 (22.3 bits), Expect = 4.6e-06, Sum P(4) = 4.6e-06
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSP 800
++ + L+ LR+ C HP + S G + L+ P
Sbjct: 789 QVFSGLVALRKICNHPDLFSGGPKILKCVP 818
>UNIPROTKB|I3LDG1 [details] [associations]
symbol:LOC100738357 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00560000077077 EMBL:FP236283
Ensembl:ENSSSCT00000031310 OMA:ENWRTEL Uniprot:I3LDG1
Length = 323
Score = 134 (52.2 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 37/133 (27%), Positives = 68/133 (51%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYA-KHRWCITGTPIQRKLDDLYGLLRFLK 652
L +I W + +DEA +++ E L+L A +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 9 LKKIHWSCVIIDEAHRLKNRNCKLLE-GLKLMALEHKVLLTGTPLQNSVEELFSLLNFLE 67
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
S F ++E D V ++ K +M R K V E L P++E +
Sbjct: 68 PSQFPSETAFLEEFGDLKTEEQVKKLQ---SILKPMMLRRLKDDV--EKNLAPKQETIIE 122
Query: 713 LTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 123 VELTNIQKKYYRA 135
Score = 49 (22.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 156 LINTMMELRKCCNHP 170
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 108 (43.1 bits), Expect = 5.3e-06, Sum P(4) = 5.3e-06
Identities = 38/135 (28%), Positives = 63/135 (46%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L R + + LDEAQ ++++ + + ++ A HR +TGTP+Q L +L+ LL FL
Sbjct: 664 LKRFDYSFLILDEAQNIKNSDSKRYKNIFKIGAHHRLLLTGTPLQNNLYELWSLLNFLMP 723
Query: 654 SPFSISRWWIEVIRDPYE-NGDV--GAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECV 710
F + ++ E NGD A+ K + R K VS EL+ P+ E V
Sbjct: 724 HIFGSVKKDNYLLNQLLEYNGDDCDSAITRMKKILSPFILRRLKSTVSKELK--PKIEHV 781
Query: 711 SWLTFSPIEEHFYQS 725
++ Y++
Sbjct: 782 EICKLPKFQDETYKN 796
Score = 84 (34.6 bits), Expect = 5.3e-06, Sum P(4) = 5.3e-06
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 360 GILADEMGLGKTVELLACIFAHRKPASDDS 389
GILADEMGLGKTV+ ++ + AH K A +D+
Sbjct: 563 GILADEMGLGKTVQTIS-LLAHIKEAYNDN 591
Score = 60 (26.2 bits), Expect = 5.3e-06, Sum P(4) = 5.3e-06
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISEL-VGAD--I 555
G L+V PA ILA W+ E T SL Y G N + ++ + G D +
Sbjct: 592 GPHLVVVPATILANWEREF--QTWCPSLSIVRYYG--NLREREELRYELKKKRPGKDFNV 647
Query: 556 VLTTYDVL 563
+LTTY++L
Sbjct: 648 ILTTYNLL 655
Score = 38 (18.4 bits), Expect = 5.3e-06, Sum P(4) = 5.3e-06
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 772 LLNSLLKLRQACCHP 786
L N L++LR+A HP
Sbjct: 895 LNNILMQLRKAANHP 909
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 95 (38.5 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 39/167 (23%), Positives = 70/167 (41%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
+ WR I +DE +++ + L + +R ITGTP+Q + +L+ LL FL F
Sbjct: 326 YQWRYIIVDEGHRLKNMNCRLIKELLSYNSANRLLITGTPLQNNITELWSLLHFLLPEIF 385
Query: 657 ----SISRWW-IEVIRDPYENGDVGAME--------FTHKFFKEIMCRSSKVHVSDELQL 703
S W+ + D NG +E H K + R K V E L
Sbjct: 386 NDLNSFQNWFDFSSVLD--NNGQTDMIERRKRTLVSTMHSILKPFLLRRVKTDV--ESAL 441
Query: 704 PPQEECVSWLTFSPIEEHFYQSQHETCVGYAREVIQ-RLKDNILKRN 749
P + E + + + ++ Y+ E G R+ ++ + + ++ +N
Sbjct: 442 PKKREYILYAPLTLEQKDLYR---EILNGTGRQYLEEKATERLMAKN 485
Score = 75 (31.5 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 498 TGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLS-DTSIMDISELVGAD-- 554
+G LI P ++ W E R T PG +KT +Y G R+ M++ + D
Sbjct: 250 SGPFLISAPLSTVSNWVDEFARWT-PG-IKTVLYHGTRDERAQLRKKFMNLRDQKSPDFP 307
Query: 555 IVLTTYDVLKED 566
+V T+Y++ D
Sbjct: 308 VVCTSYEICMND 319
Score = 71 (30.1 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKTV+ ++ I
Sbjct: 223 GILADEMGLGKTVQAISLI 241
Score = 44 (20.5 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGK 813
K+ N +++ R AC P + + P S+DE L+ GK
Sbjct: 588 KMQNPVMQARLACNSPH---NFYWPWAEDPSSIDETLVTASGK 627
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 131 (51.2 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 604 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFI 663
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 664 MPEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQIL 717
Query: 712 WLTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 718 RVEMSALQKQYYK 730
Score = 61 (26.5 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 506 ILADEMGLGKTIQTIS 521
Score = 53 (23.7 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G LIV P L W E P + +Y G +RN+ I ++ + +
Sbjct: 534 GPFLIVVPLSTLTSWQREFEIWA-P-EINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 591
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 592 LITTYEILLKD 602
Score = 47 (21.6 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E ++LK+N + PG
Sbjct: 1178 HNSCVSAMQEYEEQLKENASEGKGPG 1203
Score = 42 (19.8 bits), Expect = 0.00036, Sum P(4) = 0.00036
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEAT 492
K+ TR++ N+ ++ + D+LIE T
Sbjct: 219 KRQTRRRAAKNVSYKEDDDFETDSDDLIEMT 249
Score = 37 (18.1 bits), Expect = 5.0e-05, Sum P(4) = 5.0e-05
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 765 THAEAAKLLNSLLKLRQACCH 785
T + LN +++L++ C H
Sbjct: 744 TRGSTSGFLNIVMELKKCCNH 764
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 139 (54.0 bits), Expect = 5.6e-06, Sum P(5) = 5.6e-06
Identities = 40/147 (27%), Positives = 76/147 (51%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYA-KHRWCITGTPIQRKLDDLYGLLRF 650
T L+RI W + +DEA +++ + T + LR Y+ H +TGTP+Q +L+ LL F
Sbjct: 641 THLSRIPWKYLVIDEAHRLKNKSCKLT-IELRSYSFDHLLLLTGTPLQNNTQELWSLLNF 699
Query: 651 LKSSPFS-ISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEEC 709
L FS + ++ +E D E+ V +++ K + R K V E + P+EE
Sbjct: 700 LDPKQFSNLDQFLLEY-GDLKESSQVESLQ---AILKPYLLRRMKERV--EKSIAPKEET 753
Query: 710 VSWLTFSPIEEHFYQSQHETCVGYARE 736
+ + + +++ +Y++ +E + R+
Sbjct: 754 IVEVELTTVQKKYYRAIYEKNFSFLRK 780
Score = 61 (26.5 bits), Expect = 5.6e-06, Sum P(5) = 5.6e-06
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 361 ILADEMGLGKTVELLACIFAHRK 383
IL DEMGLGKTV+ ++ + RK
Sbjct: 531 ILGDEMGLGKTVQSVSILETLRK 553
Score = 60 (26.2 bits), Expect = 5.6e-06, Sum P(5) = 5.6e-06
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 768 EAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLS-MDEILMVLI 811
+ LLN +++LR+ C HP + + G+ + S + D+I LI
Sbjct: 786 QGPSLLNIMMELRKCCNHPYL-TKGVEQSETSSIKDKDQIFQKLI 829
Score = 44 (20.5 bits), Expect = 5.6e-06, Sum P(5) = 5.6e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 35 SEQPEKEELADVDHPFFVEVNRTCWL-LDEHLD 66
+E P KEEL D P RT W +D+ D
Sbjct: 474 NEMPSKEELRDKPRP-----PRTAWKKIDQSPD 501
Score = 41 (19.5 bits), Expect = 5.6e-06, Sum P(5) = 5.6e-06
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 989 LSVAQQEFRKSYMQVCNALDDREKQYSAWW 1018
+++ Q + Y+ V L D +WW
Sbjct: 1392 MALVSQILKLGYLSVAELLGDLSDAPFSWW 1421
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 123 (48.4 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 35/136 (25%), Positives = 63/136 (46%)
Query: 589 VIPTLLTRIFWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGL 647
+I + + F WR + +DEA +++ + +E+ +R +TGTP+Q L +L+ L
Sbjct: 274 IIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWAL 333
Query: 648 LRFLKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQE 707
L FL F+ S + GD +E H + + R K V E L P++
Sbjct: 334 LNFLLPDVFNSSEDFDAWFDTNNCLGDTKLVERLHTVLRPFLLRRIKADV--EKSLLPKK 391
Query: 708 ECVSWLTFSPIEEHFY 723
E ++ S ++ +Y
Sbjct: 392 EIKIYVGLSKMQREWY 407
Score = 66 (28.3 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 184 GILADEMGLGKTLQTISLL 202
Score = 55 (24.4 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 22/81 (27%), Positives = 38/81 (46%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALN 830
+LLN L++LR+ C HP + G P + D L+V GK + L KL+ L
Sbjct: 428 RLLNVLMQLRKCCNHPYL-FDGAEP--GPPYTTDLHLVVNSGKMVV-----LDKLLPKLK 479
Query: 831 GLAGIALIEKNLSQAVSLYKE 851
LI +++ + + ++
Sbjct: 480 EQGSRVLIFSQMTRVLDILED 500
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 127 (49.8 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS- 657
W + LDEAQ ++S++++ + L ++R +TGTPIQ + +L+ LL F+ S F
Sbjct: 971 WQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWALLHFIMPSLFDS 1030
Query: 658 ---ISRWWIEVIRDPYE-NGDVGAMEFT--HKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
S W+ + I + N + + H K M R K +V EL ++E
Sbjct: 1031 HNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMILKPFMLRRVKKNVQSELGEKIEKEVYC 1090
Query: 712 WLT 714
LT
Sbjct: 1091 DLT 1093
Score = 67 (28.6 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 13/17 (76%), Positives = 16/17 (94%)
Query: 360 GILADEMGLGKTVELLA 376
GILADEMGLGKTV+ ++
Sbjct: 863 GILADEMGLGKTVQSIS 879
Score = 56 (24.8 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G L++ PA L W EITR P LK Y G+
Sbjct: 892 GPFLVIAPASTLHNWQQEITRFV-P-KLKCIPYWGS 925
>DICTYBASE|DDB_G0286219 [details] [associations]
symbol:DDB_G0286219 "putative TBP-associated factor"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR016024
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0286219 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR021133
PROSITE:PS50077 GO:GO:0003677 EMBL:AAFI02000085 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 OMA:TKQEGAI InterPro:IPR022707 Pfam:PF12054
RefSeq:XP_637789.1 ProteinModelPortal:Q54M42 STRING:Q54M42
PRIDE:Q54M42 EnsemblProtists:DDB0233434 GeneID:8625503
KEGG:ddi:DDB_G0286219 InParanoid:Q54M42 ProtClustDB:CLSZ2430112
Uniprot:Q54M42
Length = 2005
Score = 107 (42.7 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 47/195 (24%), Positives = 80/195 (41%)
Query: 604 LDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWI 663
LDE ++++ T+ A RL + HR ++GTPIQ + +L+ L FL + +
Sbjct: 1514 LDEGHIIKNAKTKLTQAAKRLQSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKLFN 1573
Query: 664 EVI-------RDPY---ENGDVG--AMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
E+ +DP ++ + G AME H+ + R K V +L PP+
Sbjct: 1574 ELYSKPILASKDPKCSTKDQEAGVLAMEALHRQVLPFLLRRLKEDVLADL--PPKIIQDR 1631
Query: 712 WLTFSPIEEHFYQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAK 771
+ SP++ Y T +E I K+ + N ++ A
Sbjct: 1632 YCNLSPLQIRLYDYFSRT---QFKETI---KNEVEDENEDADEGGESKKKKGGNGGGATH 1685
Query: 772 LLNSLLKLRQACCHP 786
+ +L LR+ C HP
Sbjct: 1686 IFQALQYLRKLCGHP 1700
Score = 75 (31.5 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 17/74 (22%), Positives = 36/74 (48%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
+L++CP ++ W EI + ++K Y G N S S+ ++++ +Y
Sbjct: 1440 SLVICPPSLVGHWFYEIKKFCSDSTMKPMTYMG--NPSERQAQR---SKFKDHNVLIMSY 1494
Query: 561 DVLKEDLSHDSDRH 574
D+++ D+ S+ H
Sbjct: 1495 DIMRNDIDILSEMH 1508
Score = 71 (30.1 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 352 YTSSYVFGGILADEMGLGKTVELLACIFA 380
+ + Y GIL D+MGLGKT++ + CI A
Sbjct: 1390 FLNKYKLHGILCDDMGLGKTLQTI-CIIA 1417
Score = 46 (21.3 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 87 SEDFYQVSRYTLRLHVCHVNEFIGRIKLGHWP-LLSSNDVTL 127
SE F+ +SRY + H+ + E + + W LL +D+++
Sbjct: 502 SETFHPISRYLVEKHIDKLPEILTIL----WDILLELDDISV 539
>UNIPROTKB|F1SDX0 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008023 "transcription elongation factor complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0007256
"activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 KO:K10841 OMA:NGEMQIF GO:GO:0000303
EMBL:CT990602 EMBL:CT990615 RefSeq:XP_003483566.1
Ensembl:ENSSSCT00000011375 GeneID:100738583 KEGG:ssc:100738583
Uniprot:F1SDX0
Length = 1481
Score = 91 (37.1 bits), Expect = 7.0e-06, Sum P(4) = 7.0e-06
Identities = 32/144 (22%), Positives = 59/144 (40%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRF--- 650
++R W + LDE + + AA T + HR ++G+P+Q L +L+ L F
Sbjct: 624 ISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFP 683
Query: 651 --LKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKF-------FKEIMCRSSKVHVSDEL 701
L + P + ++ + + Y N ++ +K + R K V L
Sbjct: 684 GKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSL 743
Query: 702 QLPPQEECVSWLTFSPIEEHFYQS 725
LP + E V + + + YQ+
Sbjct: 744 SLPDKNEQVLFCRLTDEQHKVYQN 767
Score = 78 (32.5 bits), Expect = 7.0e-06, Sum P(4) = 7.0e-06
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTR-PGSLKTCIYEGARNSSLSDTSIMDISELVGADIVL 557
G T+IVCP ++ QW E HT P ++E + + + DI+ G I++
Sbjct: 556 GPTIIVCPTTVMHQWVKEF--HTWWPPFRVAILHETGSFTHKKEKLVRDIAHCHG--ILI 611
Query: 558 TTYDVLKEDLSHDSDRHE 575
T+Y ++ + D RH+
Sbjct: 612 TSYSYIRL-MQDDISRHD 628
Score = 75 (31.5 bits), Expect = 7.0e-06, Sum P(4) = 7.0e-06
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 359 GGILADEMGLGKTVELLA 376
GGIL DEMGLGKT++++A
Sbjct: 516 GGILGDEMGLGKTIQIIA 533
Score = 50 (22.7 bits), Expect = 7.0e-06, Sum P(4) = 7.0e-06
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSP 800
++ + L+ LR+ C HP + S G ++ + P
Sbjct: 783 QIFSGLVALRKICNHPDLFSGGPKNFKGIP 812
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 117 (46.2 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 594 LTRIFWWRICLDEAQMVES-NAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLK 652
L FW + +DE +++ N E+ R A ++ +TGTP+Q L +L+ LL FL
Sbjct: 342 LQSCFWKYLIVDEGHRIKNMNCRLIRELK-RFNADNKLLLTGTPLQNNLAELWSLLNFLL 400
Query: 653 SSPF----SISRWW-IEVIRDPYEN-----GDVGAMEFTHKFFKEIMCRSSKVHVSDELQ 702
F S W+ I I + E+ + + H+ + R K V+ L+
Sbjct: 401 PDVFDDLKSFESWFDITSITETAEDIIAKEKEQNILHMLHQILTPFLLRRLKSDVA--LE 458
Query: 703 LPPQEECVSWLTFSPIEEHFY 723
+PP+ E V + + +E FY
Sbjct: 459 VPPKREVVVYAPLAKKQETFY 479
Score = 73 (30.8 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 243 GILADEMGLGKTIQCIATI 261
Score = 50 (22.7 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 22/91 (24%), Positives = 37/91 (40%)
Query: 723 YQSQHETCVGYAREVIQRLKDNILKRNVPGHASSDALYNPIITHAEAAKLLNSLLKLRQA 782
Y +H ++I R ++ ++K S P+ + KL N ++ LR+
Sbjct: 517 YCEEHNGSPDDLEKLINRTQEEVVKERPVVEVSM-----PMDSEVNL-KLQNIMMLLRKC 570
Query: 783 CCHPQVGSSGLRSLQQSPLSMDEILMVLIGK 813
C HP + L Q +DE L+ GK
Sbjct: 571 CNHPYLIEYPLDPATQQ-FKVDEDLVKNSGK 600
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 125 (49.1 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ +R +TGTP+Q L +L+ LL FL F
Sbjct: 299 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF 358
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H + + R K V E LPP++E ++ S
Sbjct: 359 NSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADV--EKSLPPKKEVKIYVGLS 416
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 417 KMQREWY 423
Score = 66 (28.3 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 200 GILADEMGLGKTLQTISLL 218
Score = 52 (23.4 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
+LLN L++LR+ C HP
Sbjct: 444 RLLNILMQLRKCCNHP 459
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 125 (49.1 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ +R +TGTP+Q L +L+ LL FL F
Sbjct: 299 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF 358
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H + + R K V E LPP++E ++ S
Sbjct: 359 NSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADV--EKSLPPKKEVKIYVGLS 416
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 417 KMQREWY 423
Score = 66 (28.3 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 200 GILADEMGLGKTLQTISLL 218
Score = 52 (23.4 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
+LLN L++LR+ C HP
Sbjct: 444 RLLNILMQLRKCCNHP 459
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 125 (49.1 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ +R +TGTP+Q L +L+ LL FL F
Sbjct: 300 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF 359
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H + + R K V E LPP++E ++ S
Sbjct: 360 NSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADV--EKSLPPKKEVKIYVGLS 417
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 418 KMQREWY 424
Score = 66 (28.3 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 201 GILADEMGLGKTLQTISLL 219
Score = 52 (23.4 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
+LLN L++LR+ C HP
Sbjct: 445 RLLNILMQLRKCCNHP 460
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 125 (49.1 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ +R +TGTP+Q L +L+ LL FL F
Sbjct: 300 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF 359
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H + + R K V E LPP++E ++ S
Sbjct: 360 NSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADV--EKSLPPKKEVKIYVGLS 417
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 418 KMQREWY 424
Score = 66 (28.3 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 201 GILADEMGLGKTLQTISLL 219
Score = 52 (23.4 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
+LLN L++LR+ C HP
Sbjct: 445 RLLNILMQLRKCCNHP 460
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 125 (49.1 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ +R +TGTP+Q L +L+ LL FL F
Sbjct: 300 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF 359
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H + + R K V E LPP++E ++ S
Sbjct: 360 NSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADV--EKSLPPKKEVKIYVGLS 417
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 418 KMQREWY 424
Score = 66 (28.3 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 201 GILADEMGLGKTLQTISLL 219
Score = 52 (23.4 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
+LLN L++LR+ C HP
Sbjct: 445 RLLNILMQLRKCCNHP 460
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 125 (49.1 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ +R +TGTP+Q L +L+ LL FL F
Sbjct: 300 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF 359
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H + + R K V E LPP++E ++ S
Sbjct: 360 NSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADV--EKSLPPKKEVKIYVGLS 417
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 418 KMQREWY 424
Score = 66 (28.3 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 201 GILADEMGLGKTLQTISLL 219
Score = 52 (23.4 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 771 KLLNSLLKLRQACCHP 786
+LLN L++LR+ C HP
Sbjct: 445 RLLNILMQLRKCCNHP 460
>UNIPROTKB|Q03468 [details] [associations]
symbol:ERCC6 "DNA excision repair protein ERCC-6"
species:9606 "Homo sapiens" [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0007256 "activation of JNKK activity" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0010224 "response to UV-B" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEA] [GO:0045494 "photoreceptor cell
maintenance" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0047485 "protein N-terminus
binding" evidence=IPI] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IDA] [GO:0008023 "transcription
elongation factor complex" evidence=IDA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP;TAS] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0009411 "response to UV"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006979
"response to oxidative stress" evidence=IDA] [GO:0006284
"base-excision repair" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0009411 GO:GO:0008630 GO:GO:0006979
GO:GO:0005730 GO:GO:0032403 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 Orphanet:279 GO:GO:0045494
GO:GO:0010332 GO:GO:0006366 GO:GO:0004386 GO:GO:0010165
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 EMBL:CH471187 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 Orphanet:1466 EMBL:L04791 EMBL:AY204752 EMBL:AL138760
IPI:IPI00414779 PIR:A44224 RefSeq:NP_000115.1 UniGene:Hs.654449
ProteinModelPortal:Q03468 SMR:Q03468 DIP:DIP-193N IntAct:Q03468
MINT:MINT-1193928 STRING:Q03468 PhosphoSite:Q03468 DMDM:416959
PaxDb:Q03468 PRIDE:Q03468 Ensembl:ENST00000355832 GeneID:2074
KEGG:hsa:2074 UCSC:uc001jhr.4 CTD:2074 GeneCards:GC10M050663
HGNC:HGNC:3438 MIM:133540 MIM:214150 MIM:278800 MIM:600630
MIM:609413 MIM:613761 neXtProt:NX_Q03468 Orphanet:90321
Orphanet:90322 Orphanet:90324 Orphanet:1569 Orphanet:178338
PharmGKB:PA27852 HOGENOM:HOG000170952 HOVERGEN:HBG051502
InParanoid:Q03468 KO:K10841 OMA:NGEMQIF OrthoDB:EOG476JZF
PhylomeDB:Q03468 ChiTaRS:ERCC6 GenomeRNAi:2074 NextBio:8437
ArrayExpress:Q03468 Bgee:Q03468 CleanEx:HS_ERCC6
Genevestigator:Q03468 GermOnline:ENSG00000032514 GO:GO:0000303
Uniprot:Q03468
Length = 1493
Score = 94 (38.1 bits), Expect = 8.3e-06, Sum P(5) = 8.3e-06
Identities = 32/144 (22%), Positives = 59/144 (40%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRF--- 650
++R W + LDE + + AA T + HR ++G+P+Q L +L+ L F
Sbjct: 635 ISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFP 694
Query: 651 --LKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKF-------FKEIMCRSSKVHVSDEL 701
L + P + ++ + + Y N ++ +K + R K V L
Sbjct: 695 GKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSL 754
Query: 702 QLPPQEECVSWLTFSPIEEHFYQS 725
LP + E V + + + YQ+
Sbjct: 755 SLPDKNEQVLFCRLTDEQHKVYQN 778
Score = 75 (31.5 bits), Expect = 8.3e-06, Sum P(5) = 8.3e-06
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 359 GGILADEMGLGKTVELLA 376
GGIL DEMGLGKT++++A
Sbjct: 527 GGILGDEMGLGKTIQIIA 544
Score = 72 (30.4 bits), Expect = 8.3e-06, Sum P(5) = 8.3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTR-PGSLKTCIYEGARNSSLSDTSIMDISELVGADIVL 557
G T+IVCP ++ QW E HT P ++E + + I D++ G I++
Sbjct: 567 GPTVIVCPTTVMHQWVKEF--HTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG--ILI 622
Query: 558 TTYD---VLKEDLS 568
T+Y ++++D+S
Sbjct: 623 TSYSYIRLMQDDIS 636
Score = 55 (24.4 bits), Expect = 8.3e-06, Sum P(5) = 8.3e-06
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSP 800
++ + L+ LR+ C HP + S G ++L+ P
Sbjct: 794 QIFSGLIALRKICNHPDLFSGGPKNLKGLP 823
Score = 39 (18.8 bits), Expect = 8.3e-06, Sum P(5) = 8.3e-06
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 29 KQKPHGSEQPEKEELADVDHPFF 51
K P G ++ +K + ++D FF
Sbjct: 405 KPLPKGGKRQKKVPVQEIDDDFF 427
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 120 (47.3 bits), Expect = 9.1e-06, Sum P(3) = 9.1e-06
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W + +DEA +++ ++ + +TGTPIQ L +LY LL F++ FS
Sbjct: 168 WSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSK 227
Query: 659 SRW--WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+I+ +D E A E HK + + R K V+ EL P + E V + S
Sbjct: 228 EEVGDFIQRYQD-IEKESESASEL-HKLLQPFLLRRVKAEVATEL--PKKTEVVIYHGMS 283
Query: 717 PIEEHFYQS-QHETCVGYAREVIQRLK-DNILKR 748
+++ +Y++ + + E +++K NIL +
Sbjct: 284 ALQKKYYKAILMKDLDAFENETAKKVKLQNILSQ 317
Score = 78 (32.5 bits), Expect = 9.1e-06, Sum P(3) = 9.1e-06
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+CP +L+ W E+ R PG L Y G + D+ + ++LT
Sbjct: 96 GPFLILCPLSVLSNWKEEMQRFA-PG-LSCVTYAGDKEERACLQQ--DLKQESRFHVLLT 151
Query: 559 TYDVLKEDLS 568
TY++ +D S
Sbjct: 152 TYEICLKDAS 161
Score = 62 (26.9 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 359 GGILADEMGLGKTVELLACIFAHRKPASDDSIFIDTA-VQVTDDQKVNLRR 408
G IL DEMGLGKT + +A +D+ F+ + V + K ++R
Sbjct: 66 GCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQR 116
Score = 42 (19.8 bits), Expect = 9.1e-06, Sum P(3) = 9.1e-06
Identities = 20/87 (22%), Positives = 37/87 (42%)
Query: 767 AEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLV 826
A+ KL N L +LR+ HP + ++ P + + L GK + L KL+
Sbjct: 306 AKKVKLQNILSQLRKCVDHPYL----FDGVEPEPFEVGDHLTEASGKLHL-----LDKLL 356
Query: 827 MALNGLAGIALIEKNLSQAVSLYKEAM 853
L L+ ++Q + + ++ M
Sbjct: 357 AFLYSGGHRVLLFSQMTQMLDILQDYM 383
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 120 (47.3 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 36/126 (28%), Positives = 58/126 (46%)
Query: 605 DEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS-----IS 659
DE M+++ ++ + +R+ AKHR +TGTP+Q L +L LL F+ FS I
Sbjct: 565 DEGHMLKNMSSVRYQQLMRINAKHRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIR 624
Query: 660 RWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDEL--QLPPQEECVSWLTFSP 717
R + + E H K+I+ V DE+ QLPP+++ + S
Sbjct: 625 RMFSSKAKTAEEQSTYEKERIAHA--KQIIKPFILRRVKDEVLKQLPPKKDHIELCAMSE 682
Query: 718 IEEHFY 723
+E Y
Sbjct: 683 KQEQLY 688
Score = 73 (30.8 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 15/22 (68%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ +A + AH
Sbjct: 454 GILADEMGLGKTIQAIAFL-AH 474
Score = 48 (22.0 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISE-LVGADIVL 557
G LIV PA L W E+ P Y G++ + DIS +V ++++
Sbjct: 482 GPHLIVVPASTLDNWIREVNLWC-PELNVLFYYVGSQEDRKHLRA--DISNRVVDFNVIV 538
Query: 558 TTYDVLKEDLSHDSDR 573
TTY+ +S DR
Sbjct: 539 TTYNCA---ISSSDDR 551
>UNIPROTKB|J9PA15 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
EMBL:AAEX03004382 EMBL:AAEX03004383 EMBL:AAEX03004384
EMBL:AAEX03004387 EMBL:AAEX03004388 Ensembl:ENSCAFT00000048702
Uniprot:J9PA15
Length = 1555
Score = 120 (47.3 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 600 WR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
WR + LDEAQ +++ + + L ++ R +TGTP+Q L +L+ L+ FL F
Sbjct: 746 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQS 805
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECV 710
R + E +P G+ E+ HK + + R KV V E Q+P + E V
Sbjct: 806 HREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDV--EKQMPKKYEHV 862
Score = 72 (30.4 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ ++ + AH
Sbjct: 645 GILADEMGLGKTIQTIS-LLAH 665
Score = 54 (24.1 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGAR 535
G LI+ P ++ W+ E+ R P S K Y GA+
Sbjct: 674 GPHLIIVPTSVMLNWEMELKRWC-P-SFKILTYYGAQ 708
Score = 46 (21.3 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 772 LLNSLLKLRQACCHPQV 788
++N L++LR+ C HP +
Sbjct: 896 VINILMQLRKVCNHPNL 912
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 132 (51.5 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 606 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 665
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 666 MPEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQIL 719
Query: 712 WLTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 720 RVEMSALQKQYYK 732
Score = 61 (26.5 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 508 ILADEMGLGKTIQTIS 523
Score = 53 (23.7 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G LIV P L W E P + +Y G +RN+ I ++ + +
Sbjct: 536 GPFLIVVPLSTLTSWQREFEIWA-P-EINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 593
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 594 LITTYEILLKD 604
Score = 43 (20.2 bits), Expect = 0.00053, Sum P(4) = 0.00053
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEATDSPV 496
K+ TR++ N+ ++ + D+LIE T V
Sbjct: 218 KRQTRRRAAKNVSYKEDDDFETDSDDLIEMTGEGV 252
Score = 38 (18.4 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 765 THAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALR- 823
T + LN +++L++ C H + + +++ EIL+ LI + G+ L
Sbjct: 746 TRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENG---QEILLSLI---RSSGKLILLD 799
Query: 824 KLVMALNGLAGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLD 866
KL+ L LI + + + + E + + +H RLD
Sbjct: 800 KLLTRLRERGNRVLIFSQMVRMLDILAEYLTI--KHYPFQRLD 840
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 126 (49.4 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 33/132 (25%), Positives = 67/132 (50%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLK 652
+L++I W + +DEA ++++ A L K++ ITGTP+Q +++L+ LL FL
Sbjct: 748 VLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLD 807
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
F ++E ++ + + + H + + R +V E LPP+ E +
Sbjct: 808 PGKFKNKDEFVENYKN-LSSFNESELANLHLELRPHILR--RVIKDVEKSLPPKIERILR 864
Query: 713 LTFSPIEEHFYQ 724
+ SP+++ +Y+
Sbjct: 865 VEMSPLQKQYYK 876
Score = 63 (27.2 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 25/73 (34%), Positives = 33/73 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISEL-VGADI-- 555
G L+V P LA W E R PG + +Y G R S +E VG I
Sbjct: 675 GPFLVVVPLSTLANWAKEF-RKWLPG-MNIIVYVGTRASREVCQQYEFYNEKKVGRPIKF 732
Query: 556 --VLTTYDVLKED 566
+LTTY+V+ +D
Sbjct: 733 NALLTTYEVVLKD 745
Score = 61 (26.5 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 12/18 (66%), Positives = 16/18 (88%)
Query: 361 ILADEMGLGKTVELLACI 378
ILADEMGLGKTV+ ++ +
Sbjct: 647 ILADEMGLGKTVQSVSML 664
Score = 43 (20.2 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 772 LLNSLLKLRQACCHP 786
LLN +++L++ C HP
Sbjct: 897 LLNIVVELKKCCNHP 911
>UNIPROTKB|F6XTU7 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
Length = 1075
Score = 131 (51.2 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 303 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 362
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 363 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKVYLGLS 420
Query: 717 PIEEHFY 723
++ ++
Sbjct: 421 KMQREWF 427
Score = 69 (29.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A +
Sbjct: 204 GILADEMGLGKTLQTIALL 222
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 871 IHLHHNLTEILPMVANCATELSQN 894
+H+++ I+ M+ C TE+ Q+
Sbjct: 481 VHINYCSKGIISMLDYCKTEIEQH 504
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 134 (52.2 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLK 652
+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL FL
Sbjct: 610 VLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLLHFLM 669
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
S F W E D + G + HK + + R K V E LP + E +
Sbjct: 670 SDKFE--SW--EDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQILR 723
Query: 713 LTFSPIEEHFYQ 724
+ S ++ FY+
Sbjct: 724 VDMSAQQKQFYK 735
Score = 61 (26.5 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 511 ILADEMGLGKTIQTIS 526
Score = 53 (23.7 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNS--SLSDTS-IMDISELVGADI 555
G ++V P L W E T + +Y G S ++ D I ++ + +
Sbjct: 539 GPFIVVVPLSTLTSWQREFD--TWAPDMNVVVYLGDVTSRKTIRDYEWINPQTKRIKFNA 596
Query: 556 VLTTYDVLKED 566
+LTTY++L +D
Sbjct: 597 LLTTYEILLKD 607
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E + LK+N ++ PG
Sbjct: 1181 HNSCVTAVQEHEEHLKENPVEAKGPG 1206
Score = 44 (20.5 bits), Expect = 4.1e-05, Sum P(5) = 4.1e-05
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 820 EALRKLVMALNGLAGIA----LIEKNLSQAVSL----YKEAMAVVEEHSEDFRLDPL 868
+A +K L L IA L+EK+++ L + + V+EH E + +P+
Sbjct: 1144 KAYKKFGAPLERLEAIARDSELVEKSIADLKRLGELVHNSCVTAVQEHEEHLKENPV 1200
Score = 38 (18.4 bits), Expect = 4.1e-05, Sum P(5) = 4.1e-05
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 765 THAEAAKLLNSLLKLRQACCH 785
T ++ LN +++L++ C H
Sbjct: 749 TRGSSSGFLNIVMELKKCCNH 769
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 112 (44.5 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 121 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 180
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 181 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--EA 238
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S ++ Y+
Sbjct: 239 QLPEKVEYVIKCDMSALQRVLYR 261
Score = 73 (30.8 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 27 GILADEMGLGKTIQTIALI 45
Score = 48 (22.0 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 287 LMNTIMQLRKICNHP 301
Score = 47 (21.6 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G+ + + + + +++LT
Sbjct: 56 GPFLIIVPLSTLSNWAYEFDKWA-PSVVKVS-YKGSPAARRAFVPQLRSGKF---NVLLT 110
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 111 TYEYIIKD 118
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 121 (47.7 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 33/128 (25%), Positives = 61/128 (47%)
Query: 597 IFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
I W + +DEA + SN + + + ++ +TGTP+Q L++L+ LL FL S F
Sbjct: 401 IDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKF 460
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + D + V + H+ + M R K V + PP+ E + + S
Sbjct: 461 NDLQTFQAEFTDVSKEEQVKRL---HEILEPHMLRRLKADVLKSM--PPKSEFIVRVELS 515
Query: 717 PIEEHFYQ 724
+++ FY+
Sbjct: 516 SMQKKFYK 523
Score = 63 (27.2 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 361 ILADEMGLGKTVELLACIFA 380
ILADEMGLGKT++ + +++
Sbjct: 289 ILADEMGLGKTIQTVVFLYS 308
Score = 58 (25.5 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 772 LLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGE-EALRKLVMAL 829
LLN ++ LR+ C HP + S SP + E+ + TK G+ + L K++ L
Sbjct: 544 LLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSL----TKASGKLDLLSKMLKQL 598
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 30 QKPHGSEQPEKEELADVD---HPFFVEVN-RTCWLL 61
Q+ E+P EEL D D H F + WLL
Sbjct: 145 QRRSDMEEPSLEELDDQDGNLHERFYRYGIKPEWLL 180
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 93 (37.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 29/137 (21%), Positives = 57/137 (41%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS- 657
W + +DE ++++ L ++ +TGTP+Q L +L+ LL F+ F+
Sbjct: 327 WKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTS 386
Query: 658 ---ISRWWI-------EVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQE 707
W+ E ++ E + H + + R K V EL LP ++
Sbjct: 387 HDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDV--ELSLPRKK 444
Query: 708 ECVSWLTFSPIEEHFYQ 724
E + + T + ++ F +
Sbjct: 445 EIIMYATMTDHQKKFQE 461
Score = 78 (32.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD--IV 556
G L++ P L+ W EI R T P S+ IY G +N + + + VG IV
Sbjct: 251 GPYLVIAPLSTLSNWFNEIARFT-P-SINAIIYHGDKNQR-DELRRKHMPKTVGPKFPIV 307
Query: 557 LTTYDVLKED 566
+T+Y+V D
Sbjct: 308 ITSYEVAMND 317
Score = 66 (28.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 360 GILADEMGLGKTVELLACIFAHRK 383
GILAD+MGLGKT++ + + +H K
Sbjct: 223 GILADQMGLGKTIQTIGFL-SHLK 245
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 128 (50.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 42/177 (23%), Positives = 78/177 (44%)
Query: 554 DIVLTTYDVLKEDLSHDSDRHEGDRRFMRFQK---RYPVI---PTLLTRIFWWRICLDEA 607
++V+ DV+ D+ + G + M+ Y ++ L+ I W + +DEA
Sbjct: 481 NLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEA 540
Query: 608 QMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIR 667
++++ + + + H+ ITGTP+Q L +L+ LL F+ F W E
Sbjct: 541 HRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDC---WEEFET 597
Query: 668 DPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQ 724
E+ G + HK + + R K V E LPP+ E + + + ++ FY+
Sbjct: 598 AHNESNHKG-ISALHKKLEPFLLRRVKKDV--EKSLPPKTEQILRVDMTAHQKQFYK 651
Score = 69 (29.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 361 ILADEMGLGKTVE---LLACIFAHR 382
ILADEMGLGKT++ LLA +F HR
Sbjct: 427 ILADEMGLGKTIQSISLLASLF-HR 450
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 128 (50.1 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 34/132 (25%), Positives = 63/132 (47%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLK 652
+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 607 VLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM 666
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 667 PEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQILR 720
Query: 713 LTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 721 VEMSALQKQYYK 732
Score = 61 (26.5 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 508 ILADEMGLGKTIQTIS 523
Score = 53 (23.7 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G L+V P L W E P + +Y G +RN I S+ + +
Sbjct: 536 GPFLVVVPLSTLTSWQREFEVWA-P-EINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNA 593
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 594 LITTYEILLKD 604
Score = 50 (22.7 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E ++LK+N +R PG
Sbjct: 1182 HNSCVSAMQEYEEQLKENPGERKGPG 1207
Score = 42 (19.8 bits), Expect = 0.00093, Sum P(4) = 0.00093
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 462 KKHTRKKDMTNIVVRDGEHICQWCDELIEAT 492
K+ TR++ N+ ++ + D+LIE T
Sbjct: 222 KRQTRRRAAKNVSYKEDDDFETDSDDLIEMT 252
Score = 41 (19.5 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 18/81 (22%), Positives = 39/81 (48%)
Query: 765 THAEAAKLLNSLLKLRQACCH------PQVGS--SGLRSLQQSPLSMDEILMV--LIGKT 814
T + LN +++L++ C H P+ +G+ +LQ S +++++ L+ +
Sbjct: 746 TRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGIETLQSLIRSSGKLILLDKLLTRL 805
Query: 815 KIEGEEAL--RKLVMALNGLA 833
+ G L ++V L+ LA
Sbjct: 806 RDRGNRVLIFSQMVRMLDILA 826
>ZFIN|ZDB-GENE-070228-1 [details] [associations]
symbol:ercc6 "excision repair cross-complementing
rodent repair deficiency, complementation group 6" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-070228-1 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
EMBL:CR762493 IPI:IPI00933448 RefSeq:XP_688972.2
Ensembl:ENSDART00000112380 GeneID:560477 KEGG:dre:560477
NextBio:20883461 Bgee:F1RDN1 Uniprot:F1RDN1
Length = 1390
Score = 100 (40.3 bits), Expect = 1.6e-05, Sum P(5) = 1.6e-05
Identities = 31/149 (20%), Positives = 60/149 (40%)
Query: 589 VIPTLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLL 648
++ + R W + LDE + + A T + HR+ ++G+P+Q L +L+ L
Sbjct: 607 IMQDYIQRYDWHYVILDEGHKIRNPNAGVTTACKQFRTPHRFILSGSPMQNNLKELWSLF 666
Query: 649 RF-----LKSSPFSISRWWIEVIRDPYENGDVGAMEFTHKF-------FKEIMCRSSKVH 696
F L + P + ++ + + Y N ++ +K + R K
Sbjct: 667 DFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVQTAYKCACVLRDTINPYLLRRMKAD 726
Query: 697 VSDELQLPPQEECVSWLTFSPIEEHFYQS 725
V L LP + E V + + + YQ+
Sbjct: 727 VKANLSLPDKNEQVLFCRLTEDQRQVYQT 755
Score = 75 (31.5 bits), Expect = 1.6e-05, Sum P(5) = 1.6e-05
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 359 GGILADEMGLGKTVELLA 376
GGIL DEMGLGKT++++A
Sbjct: 504 GGILGDEMGLGKTIQIIA 521
Score = 67 (28.6 bits), Expect = 1.6e-05, Sum P(5) = 1.6e-05
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGAD-IVL 557
G T+IVCPA ++ QW E HT + + + + + I E+V + I++
Sbjct: 544 GPTVIVCPATVMHQWVKEF--HTWWPPFRVAVLHDTGSFTSKKEKL--IPEIVASHGILI 599
Query: 558 TTYDVLK--EDLSHDSDRH 574
T+Y ++ +D D H
Sbjct: 600 TSYSYIRIMQDYIQRYDWH 618
Score = 51 (23.0 bits), Expect = 1.6e-05, Sum P(5) = 1.6e-05
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSP 800
++ + L+ LR+ C HP + + G R L+ P
Sbjct: 771 QVFSGLIALRKICNHPDLFTGGPRLLRGIP 800
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(5) = 1.6e-05
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 259 ASFDVARFYEAIKRSK 274
+S D++R E++KR K
Sbjct: 151 SSKDISRKIESVKRQK 166
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 123 (48.4 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ + + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 890 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 949
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
S F E ++D GD+ E K K +M R K V E L P++E +
Sbjct: 950 SQFPSES---EFLKD---FGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKNLAPKQETI 1001
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 1002 IEVELTNIQKKYYRA 1016
Score = 63 (27.2 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ +A
Sbjct: 786 ILADEMGLGKTIQSIA 801
Score = 61 (26.5 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 766 HAEAAKLLNSLLKLRQACCHPQVGSSG 792
H LLN++++LR+ C HP + ++G
Sbjct: 1031 HTNMPNLLNTMMELRKCCNHPYLINAG 1057
Score = 48 (22.0 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G L++ P + W+ E T + T +Y G+
Sbjct: 813 GPFLVIAPLSTITNWEREFNTWTE---MNTIVYHGS 845
Score = 47 (21.6 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 894 NEQHFPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLS---DLSENGF 950
+ H PG + T A + + EE+ D D ED LS D SE F
Sbjct: 2459 HHHHHPGLRATGYPSSPATTTSATALRLPPLQPEEDEDDED-EDDDDDLSQGYDSSERDF 2517
Query: 951 N 951
+
Sbjct: 2518 S 2518
Score = 45 (20.9 bits), Expect = 0.00053, Sum P(5) = 0.00053
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 776 LLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNG 831
L KL + SS S +S +E L ++K+ EE+L L M+ +G
Sbjct: 2029 LSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLTADQSRSKLYDEESLLSLPMSQDG 2084
Score = 43 (20.2 bits), Expect = 4.1e-05, Sum P(5) = 4.1e-05
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 903 EKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDR 954
E AFK+ I K QR +R E +DF G D F+ DR
Sbjct: 1735 EAAFKLKEIA----RREKQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDR 1782
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 138 (53.6 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 36/130 (27%), Positives = 65/130 (50%)
Query: 596 RIFWWRIC-LDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSS 654
+ F WR+C +DEA +++ E +L +HR ++GTP+Q + +L+ LL FL+ S
Sbjct: 2156 KAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPS 2215
Query: 655 PFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLT 714
FS ++ +V ++ K +M R K V E L P+EE + +
Sbjct: 2216 QFSSQEEFMSEFGSLRTEEEVNKLQ---ALLKPMMLRRLKDDV--EKSLAPKEETIIEVE 2270
Query: 715 FSPIEEHFYQ 724
+ I++ +Y+
Sbjct: 2271 LTNIQKKYYR 2280
Score = 64 (27.6 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 361 ILADEMGLGKTVELLACIFAH 381
ILADEMGLGKT++ L F H
Sbjct: 2051 ILADEMGLGKTIQSLT--FVH 2069
Score = 58 (25.5 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 765 THAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQ 797
T A L+N++++LR+ C HP + + +Q
Sbjct: 2295 TSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQ 2327
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 23/90 (25%), Positives = 34/90 (37%)
Query: 928 ENSD-FTDAEDPSGHLSDLSENGFNGDRKXXXXXXXXXXXXXXLITVCENLKQKYLSGFS 986
+N D D E PS SEN G+ K + E L K G
Sbjct: 3013 DNKDSLLDPERPSSSGKSSSENASGGNDKTESENDATTVSESSYKS--EVLPGK---GSD 3067
Query: 987 VKLSVAQQEFRKSYMQVCNALDDREKQYSA 1016
+ +SVAQQ+ + ++ N D + + A
Sbjct: 3068 LDVSVAQQDALSATPELANTSDPKMNKNDA 3097
Score = 44 (20.5 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 37/163 (22%), Positives = 65/163 (39%)
Query: 894 NEQHFP-GCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAE-DPSGHLSDLSENGFN 951
N+ +F G SEK F I +E + K + + E+ AE D + + +E
Sbjct: 3597 NDPNFSFGESEKRF-IRELEAQIQRTIKLEAFNAEKAEKLAAAEKDAATEKAAATEKA-- 3653
Query: 952 GDRKXXXXXXXXXXXXXXLITVCENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDRE 1011
K L+T E++ +K +K + +E + + N L+D+
Sbjct: 3654 AAEKAASVKNEVIDLDDELMTN-ESVIKKESPVTPIKEEIKSEESPEKHDTADN-LEDKN 3711
Query: 1012 KQYSAWWLEALHHAEGNKDFSAELIRKIEEAI--SGSLNKSRA 1052
E +G +DF+ E K EA+ S +LNK ++
Sbjct: 3712 SD-----AEESTKIKGKEDFNPETTEK--EALDESTNLNKDKS 3747
>UNIPROTKB|F6XHF3 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
Ensembl:ENSCAFT00000026363 EMBL:AAEX03004382 EMBL:AAEX03004383
EMBL:AAEX03004384 EMBL:AAEX03004387 EMBL:AAEX03004388
Uniprot:F6XHF3
Length = 1823
Score = 120 (47.3 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 600 WR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
WR + LDEAQ +++ + + L ++ R +TGTP+Q L +L+ L+ FL F
Sbjct: 746 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQS 805
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECV 710
R + E +P G+ E+ HK + + R KV V E Q+P + E V
Sbjct: 806 HREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDV--EKQMPKKYEHV 862
Score = 72 (30.4 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ ++ + AH
Sbjct: 645 GILADEMGLGKTIQTIS-LLAH 665
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGAR 535
G LI+ P ++ W+ E+ R P S K Y GA+
Sbjct: 674 GPHLIIVPTSVMLNWEMELKRWC-P-SFKILTYYGAQ 708
Score = 46 (21.3 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 772 LLNSLLKLRQACCHPQV 788
++N L++LR+ C HP +
Sbjct: 896 VINILMQLRKVCNHPNL 912
>UNIPROTKB|E2R6G6 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 Ensembl:ENSCAFT00000026363
Uniprot:E2R6G6
Length = 1825
Score = 120 (47.3 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 600 WR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
WR + LDEAQ +++ + + L ++ R +TGTP+Q L +L+ L+ FL F
Sbjct: 746 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQS 805
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECV 710
R + E +P G+ E+ HK + + R KV V E Q+P + E V
Sbjct: 806 HREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDV--EKQMPKKYEHV 862
Score = 72 (30.4 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ ++ + AH
Sbjct: 645 GILADEMGLGKTIQTIS-LLAH 665
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGAR 535
G LI+ P ++ W+ E+ R P S K Y GA+
Sbjct: 674 GPHLIIVPTSVMLNWEMELKRWC-P-SFKILTYYGAQ 708
Score = 46 (21.3 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 772 LLNSLLKLRQACCHPQV 788
++N L++LR+ C HP +
Sbjct: 896 VINILMQLRKVCNHPNL 912
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 123 (48.4 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ + + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 937 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 996
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
S F E ++D GD+ E K K +M R K V E L P++E +
Sbjct: 997 SQFPSES---EFLKD---FGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKNLAPKQETI 1048
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 1049 IEVELTNIQKKYYRA 1063
Score = 63 (27.2 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ +A
Sbjct: 833 ILADEMGLGKTIQSIA 848
Score = 61 (26.5 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 766 HAEAAKLLNSLLKLRQACCHPQVGSSG 792
H LLN++++LR+ C HP + ++G
Sbjct: 1078 HTNMPNLLNTMMELRKCCNHPYLINAG 1104
Score = 48 (22.0 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G L++ P + W+ E T + T +Y G+
Sbjct: 860 GPFLVIAPLSTITNWEREFNTWTE---MNTIVYHGS 892
Score = 47 (21.6 bits), Expect = 0.00045, Sum P(5) = 0.00045
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 776 LLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNG 831
L KL + SS S +S +E L ++K+ EE+L L M+ +G
Sbjct: 2076 LSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLTADRSRSKLYDEESLLSLTMSQDG 2131
Score = 46 (21.3 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 894 NEQHFPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLS---DLSENGF 950
+ H PG + T A + + EE+ D D ED LS D SE F
Sbjct: 2506 HHHHHPGLRATGYPSSPATTTSGTALRLPPLQPEEDEDDED-EDDDDDLSQGYDSSERDF 2564
Query: 951 N 951
+
Sbjct: 2565 S 2565
Score = 43 (20.2 bits), Expect = 4.3e-05, Sum P(5) = 4.3e-05
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 903 EKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDR 954
E AFK+ I K QR +R E +DF G D F+ DR
Sbjct: 1782 EAAFKLKEIA----RREKQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDR 1829
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 112 (44.5 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 202 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 261
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 262 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--EA 319
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S ++ Y+
Sbjct: 320 QLPEKVEYVIKCDMSALQRVLYR 342
Score = 73 (30.8 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 108 GILADEMGLGKTIQTIALI 126
Score = 48 (22.0 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 368 LMNTIMQLRKICNHP 382
Score = 47 (21.6 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G+ + + + + +++LT
Sbjct: 137 GPFLIIVPLSTLSNWAYEFDKWA-PSVVKVS-YKGSPAARRAFVPQLRSGKF---NVLLT 191
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 192 TYEYIIKD 199
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 123 (48.4 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ + + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 937 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 996
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
S F E ++D GD+ E K K +M R K V E L P++E +
Sbjct: 997 SQFPSES---EFLKD---FGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKNLAPKQETI 1048
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 1049 IEVELTNIQKKYYRA 1063
Score = 63 (27.2 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ +A
Sbjct: 833 ILADEMGLGKTIQSIA 848
Score = 61 (26.5 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 766 HAEAAKLLNSLLKLRQACCHPQVGSSG 792
H LLN++++LR+ C HP + ++G
Sbjct: 1078 HTNMPNLLNTMMELRKCCNHPYLINAG 1104
Score = 48 (22.0 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G L++ P + W+ E T + T +Y G+
Sbjct: 860 GPFLVIAPLSTITNWEREFNTWTE---MNTIVYHGS 892
Score = 47 (21.6 bits), Expect = 0.00047, Sum P(5) = 0.00047
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 776 LLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNG 831
L KL + SS S +S +E L ++K+ EE+L L M+ +G
Sbjct: 2078 LSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLSADRSRSKLYDEESLLSLTMSQDG 2133
Score = 46 (21.3 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 894 NEQHFPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLS---DLSENGF 950
+ H PG + T A + + EE+ D D ED LS D SE F
Sbjct: 2508 HHHHHPGLRATGYPSSPATTTSGTALRLPPLQPEEDEDDED-EDDDDDLSQGYDSSERDF 2566
Query: 951 N 951
+
Sbjct: 2567 S 2567
Score = 43 (20.2 bits), Expect = 4.5e-05, Sum P(5) = 4.5e-05
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 903 EKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDR 954
E AFK+ I K QR +R E +DF G D F+ DR
Sbjct: 1784 EAAFKLKEIA----RREKQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDR 1831
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 123 (48.4 bits), Expect = 2.6e-05, Sum P(5) = 2.6e-05
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ + + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 554 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 613
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
S F E ++D GD+ E K K +M R K V E L P++E +
Sbjct: 614 SQFPSES---EFLKD---FGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKNLAPKQETI 665
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 666 IEVELTNIQKKYYRA 680
Score = 63 (27.2 bits), Expect = 2.6e-05, Sum P(5) = 2.6e-05
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ +A
Sbjct: 450 ILADEMGLGKTIQSIA 465
Score = 57 (25.1 bits), Expect = 2.6e-05, Sum P(5) = 2.6e-05
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 766 HAEAAKLLNSLLKLRQACCHP 786
H LLN++++LR+ C HP
Sbjct: 695 HTNMPNLLNTMMELRKCCNHP 715
Score = 48 (22.0 bits), Expect = 2.6e-05, Sum P(5) = 2.6e-05
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G L++ P + W+ E T + T +Y G+
Sbjct: 477 GPFLVIAPLSTITNWEREFNTWTE---MNTIVYHGS 509
Score = 47 (21.6 bits), Expect = 0.00022, Sum P(5) = 0.00022
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 776 LLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVMALNG 831
L KL + SS S +S +E L ++K+ EE+L L M+ +G
Sbjct: 1692 LSKLSPSSSSSSSSSSSSSSTDESEDEKEEKLSADRSRSKLYDEESLLSLTMSQDG 1747
Score = 46 (21.3 bits), Expect = 2.6e-05, Sum P(5) = 2.6e-05
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 894 NEQHFPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLS---DLSENGF 950
+ H PG + T A + + EE+ D D ED LS D SE F
Sbjct: 2122 HHHHHPGLRATGYPSSPATTTSGTALRLPPLQPEEDEDDED-EDDDDDLSQGYDSSERDF 2180
Query: 951 N 951
+
Sbjct: 2181 S 2181
Score = 43 (20.2 bits), Expect = 4.9e-05, Sum P(5) = 4.9e-05
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 903 EKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDR 954
E AFK+ I K QR +R E +DF G D F+ DR
Sbjct: 1398 EAAFKLKEIA----RREKQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDR 1445
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 115 (45.5 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 36/140 (25%), Positives = 66/140 (47%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L++I W + +DE +++ + + + Y +++R +TGTP+Q L +L+ LL F+
Sbjct: 652 ILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNNLPELWALLNFV 711
Query: 652 KSSPFSISRWWIEVIRDPYEN-GDVGAMEFT-----------HKFFKEIMCRSSKVHVSD 699
+ F + + E P+ N G M+ T HK + + R K V
Sbjct: 712 LPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHKVLRPFLLRRLKKDV-- 769
Query: 700 ELQLPPQEECVSWLTFSPIE 719
E LP ++E V FS ++
Sbjct: 770 EKDLPDKQERVIKCRFSALQ 789
Score = 70 (29.7 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ I
Sbjct: 558 GILADEMGLGKTIQTISLI 576
Score = 56 (24.8 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G L++ P L W+ E + P S+ +Y+G N+ + ++LT
Sbjct: 587 GPFLVIVPLSTLTNWNLEFEKWA-P-SVSRIVYKGPPNARKQQQQNIRWGNF---QVLLT 641
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 642 TYEYIIKD 649
Score = 45 (20.9 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 772 LLNSLLKLRQACCHPQV 788
L N L++LR+ C HP V
Sbjct: 817 LSNMLMQLRKLCNHPFV 833
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 128 (50.1 bits), Expect = 2.8e-05, Sum P(4) = 2.8e-05
Identities = 36/133 (27%), Positives = 67/133 (50%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYA-KHRWCITGTPIQRKLDDLYGLLRFLK 652
L +I W + +DEA +++ E L+L A +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 509 LKKIQWRCVVIDEAHRLKNRNCKLLE-GLKLMALEHKVLLTGTPLQNSVEELFSLLNFLE 567
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
F ++E D V ++ K +M R K V E L P++E +
Sbjct: 568 PQQFPSETAFLEEFGDLKTEEQVKKLQ---SILKPMMLRRLKDDV--EKNLAPKQETIIE 622
Query: 713 LTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 623 VELTNIQKKYYRA 635
Score = 59 (25.8 bits), Expect = 2.8e-05, Sum P(4) = 2.8e-05
Identities = 11/13 (84%), Positives = 13/13 (100%)
Query: 361 ILADEMGLGKTVE 373
ILADEMGLGKT++
Sbjct: 405 ILADEMGLGKTIQ 417
Score = 49 (22.3 bits), Expect = 2.8e-05, Sum P(4) = 2.8e-05
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 656 LINTMMELRKCCNHP 670
Score = 47 (21.6 bits), Expect = 2.8e-05, Sum P(4) = 2.8e-05
Identities = 16/77 (20%), Positives = 32/77 (41%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSS---------LSDTSIMDISE 549
G LI+ P + W+ E T ++ +Y G++ S DT +
Sbjct: 432 GPFLIIAPLSTITNWEREFRTWTEMNAI---VYHGSQISRQMIQQYEMVYRDTQGNPLPG 488
Query: 550 LVGADIVLTTYDVLKED 566
+ +V+TT++++ D
Sbjct: 489 IFKFQVVITTFEMILAD 505
Score = 43 (20.2 bits), Expect = 0.00094, Sum P(4) = 0.00094
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 449 SPRGKKRRSTFELKKHTRKKDMT-NIVVRDGEHI 481
S +KRRS ++K+ +D+ +V DGE I
Sbjct: 152 SADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETI 185
>TIGR_CMR|BA_1804 [details] [associations]
symbol:BA_1804 "helicase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR007527
Pfam:PF00176 Pfam:PF00271 Pfam:PF04434 PROSITE:PS50966
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000026038 OMA:NTLNAEM InterPro:IPR013663
Pfam:PF08455 RefSeq:NP_844228.1 RefSeq:YP_018441.1
RefSeq:YP_027937.1 ProteinModelPortal:Q81S67 IntAct:Q81S67
DNASU:1086172 EnsemblBacteria:EBBACT00000012419
EnsemblBacteria:EBBACT00000014433 EnsemblBacteria:EBBACT00000022268
GeneID:1086172 GeneID:2814636 GeneID:2849386 KEGG:ban:BA_1804
KEGG:bar:GBAA_1804 KEGG:bat:BAS1671 ProtClustDB:CLSK916372
BioCyc:BANT260799:GJAJ-1742-MONOMER
BioCyc:BANT261594:GJ7F-1813-MONOMER Uniprot:Q81S67
Length = 1064
Score = 82 (33.9 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 356 YVFGGILADEMGLGKTVELLACI 378
Y FGGILAD+MGLGKT++ +A I
Sbjct: 630 YRFGGILADDMGLGKTLQSIAYI 652
Score = 77 (32.2 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 604 LDEAQMVESNAAAATEMALR-LYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWW 662
LDEAQ + N T A++ + A++R+ +TGTP++ L++L+ + + P
Sbjct: 737 LDEAQAFK-NPTTQTARAVKTIQAEYRFGLTGTPVENSLEELWSIFHVV--FP------- 786
Query: 663 IEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHF 722
E++ E GD+ + K K + R K V EL P + E + P ++
Sbjct: 787 -ELLPGRKEFGDLRREDIA-KRVKPFVLRRLKEDVLKEL--PDKIEHLQSSELLPDQKRL 842
Query: 723 YQSQHETCVGYAREVIQRLKDNILKRN 749
Y + E ++ L + L++N
Sbjct: 843 YAAY---LAKLREETLKHLDKDTLRKN 866
Score = 66 (28.3 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 17/66 (25%), Positives = 37/66 (56%)
Query: 502 LIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTYD 561
L+V P+ ++ W +E+ + P ++ I +G N + + D++E D+V+T+Y
Sbjct: 667 LVVSPSSLVYNWLSELKKFA-P-HIRAVIADG--NQAERRKILKDVAEF---DVVITSYP 719
Query: 562 VLKEDL 567
+L+ D+
Sbjct: 720 LLRRDI 725
Score = 57 (25.1 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 771 KLLNSLLKLRQACCHP 786
++L L +LRQ CCHP
Sbjct: 869 RILAGLTRLRQICCHP 884
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 132 (51.5 bits), Expect = 3.1e-05, Sum P(5) = 3.1e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 593 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 652
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 653 MPEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQIL 706
Query: 712 WLTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 707 RVEMSALQKQYYK 719
Score = 61 (26.5 bits), Expect = 3.1e-05, Sum P(5) = 3.1e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 495 ILADEMGLGKTIQTIS 510
Score = 53 (23.7 bits), Expect = 3.1e-05, Sum P(5) = 3.1e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G LIV P L W E P + +Y G +RN+ I ++ + +
Sbjct: 523 GPFLIVVPLSTLTSWQREFEIWA-P-EINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 580
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 581 LITTYEILLKD 591
Score = 47 (21.6 bits), Expect = 3.1e-05, Sum P(5) = 3.1e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E ++LK+N + PG
Sbjct: 1167 HNSCVSAMQEYEEQLKENASEGKGPG 1192
Score = 38 (18.4 bits), Expect = 0.00022, Sum P(5) = 0.00022
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 765 THAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALR- 823
T + LN +++L++ C H + + +++ EIL+ LI + G+ L
Sbjct: 733 TRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENG---QEILLSLI---RSSGKLILLD 786
Query: 824 KLVMALNGLAGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLD 866
KL+ L LI + + + + E + + +H RLD
Sbjct: 787 KLLTRLRERGNRVLIFSQMVRMLDILAEYLTI--KHYPFQRLD 827
Score = 37 (18.1 bits), Expect = 3.1e-05, Sum P(5) = 3.1e-05
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 1009 DREKQYSAWWLEALHHAE 1026
DR QY W + H+ +
Sbjct: 1652 DRHHQYEQHWYKDHHYGD 1669
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 128 (50.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ +R ITGTP+Q L +L+ LL FL F
Sbjct: 248 FNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVF 307
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ S + E GD + H K + R K V E +L P++E ++ S
Sbjct: 308 NSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKAEV--EKRLKPKKEMKIFVGLS 365
Query: 717 PIEEHFY 723
++ +Y
Sbjct: 366 KMQRDWY 372
Score = 66 (28.3 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ ++ +
Sbjct: 149 GILADEMGLGKTLQTISLL 167
Score = 42 (19.8 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 818 GEEALRKLVMALNGLAGIALI 838
GE +LR M NG AG + +
Sbjct: 644 GESSLRTFTMDTNGEAGTSSV 664
Score = 40 (19.1 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 768 EAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVM 827
E +L N L++LR+ HP + G P + D L+ GK I L KL+
Sbjct: 390 EKMRLQNILMQLRKCTNHPYL-FDGAEP--GPPYTTDTHLVYNSGKMAI-----LDKLLP 441
Query: 828 ALNGLAGIALIEKNLSQAVSLYKE 851
L LI +++ + + ++
Sbjct: 442 KLQEQGSRVLIFSQMTRMLDILED 465
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 136 (52.9 bits), Expect = 3.4e-05, Sum P(5) = 3.4e-05
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFLK 652
L I W + +DEA ++++ + E+ L+LY +R +TGTP+Q L +L+ LL FL
Sbjct: 880 LGTIKWEFLAVDEAHRLKNSESVLHEV-LKLYNTTNRLLVTGTPLQNSLKELWNLLNFLM 938
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
+ F+ + + + D EN + + H K + R K V E LPP+ E +
Sbjct: 939 PNKFTSLKDFQDQYSDLKENDQIAQL---HSVLKPHLLRRIKKDV--EKSLPPKTERILR 993
Query: 713 LTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 994 VDLSNVQKKYYK 1005
Score = 61 (26.5 bits), Expect = 3.4e-05, Sum P(5) = 3.4e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 777 ILADEMGLGKTIQTIS 792
Score = 50 (22.7 bits), Expect = 3.4e-05, Sum P(5) = 3.4e-05
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNS-------SLSDTSIMDISELV 551
G L+V P + W E + P ++ +Y G S T+ + +L
Sbjct: 805 GPFLVVVPLSTIENWQREFAKWA-P-AMNVIVYTGTGQSRDIIRLYEFYTTNRLGKKKL- 861
Query: 552 GADIVLTTYDVLKED 566
+++LTTYD + +D
Sbjct: 862 NFNVLLTTYDFILKD 876
Score = 45 (20.9 bits), Expect = 3.4e-05, Sum P(5) = 3.4e-05
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 768 EAAKLLNSLLKLRQACCHP 786
E LLN + +L++ C HP
Sbjct: 1021 EKTTLLNIMTELKKTCNHP 1039
Score = 40 (19.1 bits), Expect = 3.4e-05, Sum P(5) = 3.4e-05
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 990 SVAQQEFRKSYMQVCN-ALDDREKQYSAWWLEALHHAEGNKDFSAE 1034
+ A +E S+ +V N + +E+Q +A W + + A+ K E
Sbjct: 1282 TTAGEELLNSF-RVANFSTTSKEEQQNATWEDIIPDADRQKAVQEE 1326
>POMBASE|SPBC1826.01c [details] [associations]
symbol:mot1 "TATA-binding protein associated factor
Mot1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017025 "TBP-class
protein binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC1826.01c GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0006355 GO:GO:0003677 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006366 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0017025 EMBL:AB027981 PIR:T39739
RefSeq:NP_596080.2 ProteinModelPortal:O43065 STRING:O43065
EnsemblFungi:SPBC1826.01c.1 GeneID:2539633 KEGG:spo:SPBC1826.01c
OrthoDB:EOG44XNQZ NextBio:20800788 Uniprot:O43065
Length = 1953
Score = 90 (36.7 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 600 WRIC-LDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
W C LDE ++++ A T+ L + HR ++GTPIQ + +L+ L FL
Sbjct: 1488 WNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFL 1540
Score = 86 (35.3 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 468 KDMTNIVVRDGEHICQWCDELIEATDSP-VATGATLIVCPAPILAQWDAEITRHTRPGSL 526
K + I + +H + +L E + SP A +LIVCP+ + W E++ + P L
Sbjct: 1389 KTLQTICIVASDHYNR--QKLFEESGSPKFAHVPSLIVCPSTLAGHWQQELSTYA-P-FL 1444
Query: 527 KTCIYEGARNSSLSDTSIMDISELVGADIVLTTYDVLKEDL 567
K Y G S M S D+V+T+YD+ + D+
Sbjct: 1445 KVSAYVGPPAERAKIRSKMKKS-----DVVVTSYDICRNDV 1480
Score = 70 (29.7 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 352 YTSSYVFGGILADEMGLGKTVELLACIFA 380
+ + Y GIL D+MGLGKT++ + CI A
Sbjct: 1371 FLNKYELHGILCDDMGLGKTLQTI-CIVA 1398
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 145 (56.1 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 600 WRIC-LDEAQMVES-NAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS 657
WR+C +DEA +++ N L +HR +TGTP+Q +D+L+ LL FL F
Sbjct: 1331 WRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIDELFSLLNFLHPQQFD 1390
Query: 658 ISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSP 717
S ++E + V ++ + K +M R K V E L P+EE + + S
Sbjct: 1391 NSATFLEQFGSCQTDDQVQKLQ---EILKPMMLRRLKEDV--EKSLGPKEETIIEVQLSD 1445
Query: 718 IEEHFYQS 725
+++ FY++
Sbjct: 1446 MQKKFYRA 1453
Score = 61 (26.5 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 361 ILADEMGLGKTVELL 375
ILADEMGLGKTV+ +
Sbjct: 1219 ILADEMGLGKTVQTI 1233
Score = 49 (22.3 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 769 AAKLLNSLLKLRQACCHP 786
A L+N +++LR+ C HP
Sbjct: 1468 APSLMNVMMELRKCCNHP 1485
Score = 42 (19.8 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 16/82 (19%), Positives = 37/82 (45%)
Query: 180 EDMSSLRVRVEILKSAFDACESLLENSRKTWKKSMINV-MSWLRPEVLTSEARYGVSKSM 238
+++ ++ + EIL+ E ++E ++ S + + L+ EV E + S +
Sbjct: 660 QELQAISDQQEILEDVPKE-EPIIEEDEPKYEYSQETIPVEELKDEVEFKEDQQSTSNLL 718
Query: 239 EMDVELMTRTKNDVSASQKHAS 260
E D + KN+ A +++
Sbjct: 719 EDDTGIDNFVKNEEGAEAGYSN 740
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 131 (51.2 bits), Expect = 3.7e-05, Sum P(5) = 3.7e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 573 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFI 632
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 633 MPEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQIL 686
Query: 712 WLTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 687 RVEMSALQKQYYK 699
Score = 61 (26.5 bits), Expect = 3.7e-05, Sum P(5) = 3.7e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 475 ILADEMGLGKTIQTIS 490
Score = 53 (23.7 bits), Expect = 3.7e-05, Sum P(5) = 3.7e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G LIV P L W E P + +Y G +RN+ I ++ + +
Sbjct: 503 GPFLIVVPLSTLTSWQREFEIWA-P-EINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 560
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 561 LITTYEILLKD 571
Score = 47 (21.6 bits), Expect = 3.7e-05, Sum P(5) = 3.7e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E ++LK+N + PG
Sbjct: 1147 HNSCVSAMQEYEEQLKENASEGKGPG 1172
Score = 37 (18.1 bits), Expect = 3.7e-05, Sum P(5) = 3.7e-05
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 1009 DREKQYSAWWLEALHHAE 1026
DR QY W + H+ +
Sbjct: 1632 DRHHQYEQHWYKDHHYGD 1649
Score = 37 (18.1 bits), Expect = 0.00031, Sum P(5) = 0.00031
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 765 THAEAAKLLNSLLKLRQACCH 785
T + LN +++L++ C H
Sbjct: 713 TRGSTSGFLNIVMELKKCCNH 733
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 92 (37.4 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
L +I W + +DE ++++ ++ +L +R +TGTP+Q L++L+ LL F+
Sbjct: 290 LVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPLQNNLNELWSLLNFI 347
Score = 65 (27.9 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 12/17 (70%), Positives = 16/17 (94%)
Query: 360 GILADEMGLGKTVELLA 376
GILADEMGLGKT++ ++
Sbjct: 196 GILADEMGLGKTLQCIS 212
Score = 65 (27.9 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G L+V P L+ W EI R P +K Y G + +D ++ E +I+LT
Sbjct: 224 GPFLVVVPVSTLSNWYNEI-RKFAP-KIKVTKYIGTKQER-NDIDLLQQQETT--NIILT 278
Query: 559 TYDVLKEDLS 568
+Y++ D +
Sbjct: 279 SYEISIRDFN 288
Score = 54 (24.1 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 757 DALYNPIITHAEAAKLLN-SLLKLRQACCHP 786
DA+Y I+ A+ KL N +++LR C P
Sbjct: 562 DAIYQDILKEAKHLKLQNLKMIQLRNICNSP 592
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 92 (37.4 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
L +I W + +DE ++++ ++ +L +R +TGTP+Q L++L+ LL F+
Sbjct: 290 LVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPLQNNLNELWSLLNFI 347
Score = 65 (27.9 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 12/17 (70%), Positives = 16/17 (94%)
Query: 360 GILADEMGLGKTVELLA 376
GILADEMGLGKT++ ++
Sbjct: 196 GILADEMGLGKTLQCIS 212
Score = 65 (27.9 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G L+V P L+ W EI R P +K Y G + +D ++ E +I+LT
Sbjct: 224 GPFLVVVPVSTLSNWYNEI-RKFAP-KIKVTKYIGTKQER-NDIDLLQQQETT--NIILT 278
Query: 559 TYDVLKEDLS 568
+Y++ D +
Sbjct: 279 SYEISIRDFN 288
Score = 54 (24.1 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 757 DALYNPIITHAEAAKLLN-SLLKLRQACCHP 786
DA+Y I+ A+ KL N +++LR C P
Sbjct: 562 DAIYQDILKEAKHLKLQNLKMIQLRNICNSP 592
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 132 (51.5 bits), Expect = 4.1e-05, Sum P(5) = 4.1e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 586 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 645
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 646 MPEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQIL 699
Query: 712 WLTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 700 RVEMSALQKQYYK 712
Score = 61 (26.5 bits), Expect = 4.1e-05, Sum P(5) = 4.1e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 488 ILADEMGLGKTIQTIS 503
Score = 53 (23.7 bits), Expect = 4.1e-05, Sum P(5) = 4.1e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G LIV P L W E P + +Y G +RN+ I ++ + +
Sbjct: 516 GPFLIVVPLSTLTSWQREFEIWA-P-EINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 573
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 574 LITTYEILLKD 584
Score = 47 (21.6 bits), Expect = 4.1e-05, Sum P(5) = 4.1e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E ++LK+N + PG
Sbjct: 1160 HNSCVSAMQEYEEQLKENASEGKGPG 1185
Score = 38 (18.4 bits), Expect = 0.00028, Sum P(5) = 0.00028
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 765 THAEAAKLLNSLLKLRQAC--CH 785
T + LN +++L++ C CH
Sbjct: 726 TRGSTSGFLNIVMELKKCCNHCH 748
Score = 37 (18.1 bits), Expect = 4.1e-05, Sum P(5) = 4.1e-05
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 1009 DREKQYSAWWLEALHHAE 1026
DR QY W + H+ +
Sbjct: 1642 DRHHQYEQHWYKDHHYGD 1659
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 132 (51.5 bits), Expect = 4.3e-05, Sum P(5) = 4.3e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 604 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 663
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 664 MPEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQIL 717
Query: 712 WLTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 718 RVEMSALQKQYYK 730
Score = 61 (26.5 bits), Expect = 4.3e-05, Sum P(5) = 4.3e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 506 ILADEMGLGKTIQTIS 521
Score = 53 (23.7 bits), Expect = 4.3e-05, Sum P(5) = 4.3e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G LIV P L W E P + +Y G +RN+ I ++ + +
Sbjct: 534 GPFLIVVPLSTLTSWQREFEIWA-P-EINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 591
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 592 LITTYEILLKD 602
Score = 47 (21.6 bits), Expect = 4.3e-05, Sum P(5) = 4.3e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E ++LK+N + PG
Sbjct: 1178 HNSCVSAMQEYEEQLKENASEGKGPG 1203
Score = 38 (18.4 bits), Expect = 0.00030, Sum P(5) = 0.00030
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 765 THAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALR- 823
T + LN +++L++ C H + + +++ EIL+ LI + G+ L
Sbjct: 744 TRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENG---QEILLSLI---RSSGKLILLD 797
Query: 824 KLVMALNGLAGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLD 866
KL+ L LI + + + + E + + +H RLD
Sbjct: 798 KLLTRLRERGNRVLIFSQMVRMLDILAEYLTI--KHYPFQRLD 838
Score = 37 (18.1 bits), Expect = 4.3e-05, Sum P(5) = 4.3e-05
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 1009 DREKQYSAWWLEALHHAE 1026
DR QY W + H+ +
Sbjct: 1660 DRHHQYEQHWYKDHHYGD 1677
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 132 (51.5 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 606 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 665
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 666 MPEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQIL 719
Query: 712 WLTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 720 RVEMSALQKQYYK 732
Score = 61 (26.5 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 508 ILADEMGLGKTIQTIS 523
Score = 53 (23.7 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G LIV P L W E P + +Y G +RN+ I ++ + +
Sbjct: 536 GPFLIVVPLSTLTSWQREFEIWA-P-EINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 593
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 594 LITTYEILLKD 604
Score = 47 (21.6 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E ++LK+N + PG
Sbjct: 1180 HNSCVSAMQEYEEQLKENASEGKGPG 1205
Score = 38 (18.4 bits), Expect = 0.00030, Sum P(5) = 0.00030
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 765 THAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALR- 823
T + LN +++L++ C H + + +++ EIL+ LI + G+ L
Sbjct: 746 TRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENG---QEILLSLI---RSSGKLILLD 799
Query: 824 KLVMALNGLAGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLD 866
KL+ L LI + + + + E + + +H RLD
Sbjct: 800 KLLTRLRERGNRVLIFSQMVRMLDILAEYLTI--KHYPFQRLD 840
Score = 37 (18.1 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 1009 DREKQYSAWWLEALHHAE 1026
DR QY W + H+ +
Sbjct: 1663 DRHHQYEQHWYKDHHYGD 1680
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 113 (44.8 bits), Expect = 4.6e-05, Sum P(4) = 4.6e-05
Identities = 37/154 (24%), Positives = 74/154 (48%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W + +DEA +++ ++ + +TGTPIQ L +LY LL F++ FS
Sbjct: 170 WSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSK 229
Query: 659 SRW--WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ +++ +D E A E +K + + R K V+ EL P + E V + S
Sbjct: 230 EQVEDFVQRYQD-IEKESESASEL-YKLLQPFLLRRVKAEVATEL--PRKTEVVIYHGMS 285
Query: 717 PIEEHFYQS-QHETCVGYAREVIQRLK-DNILKR 748
+++ +Y++ + + E+ +++K N+L +
Sbjct: 286 ALQKKYYKAILMKDLDAFENEMAKKVKLQNVLSQ 319
Score = 79 (32.9 bits), Expect = 4.6e-05, Sum P(4) = 4.6e-05
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+CP +L+ W E+ R PG L Y G ++ D+ + ++LT
Sbjct: 98 GPFLILCPLSVLSNWKEEMERFA-PG-LSCVTYAGDKDKRACLQQ--DLKQESRFHVLLT 153
Query: 559 TYDVLKEDLS 568
TY++ +D S
Sbjct: 154 TYEICLKDAS 163
Score = 44 (20.5 bits), Expect = 4.6e-05, Sum P(4) = 4.6e-05
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 757 DALYNPIITHAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKI 816
DA N + A+ KL N L +LR+ HP + ++ P + + L+ GK +
Sbjct: 301 DAFENEM---AKKVKLQNVLSQLRKCVDHPYL----FDGVEPEPFEIGDHLIEASGKLHL 353
Query: 817 EGEEALRKLVMALNGLAGIALIEKNLSQAVSLYKE 851
L KL+ L L+ ++Q + + ++
Sbjct: 354 -----LDKLLAFLYSKGHRVLLFSQMTQMLDILQD 383
Score = 39 (18.8 bits), Expect = 4.6e-05, Sum P(4) = 4.6e-05
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 291 RPYQRRAAYWMVQ 303
RPYQ + W+ Q
Sbjct: 49 RPYQLQGVNWLAQ 61
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 120 (47.3 bits), Expect = 4.8e-05, Sum P(4) = 4.8e-05
Identities = 36/135 (26%), Positives = 65/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ E + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 280 LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 339
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
F +++ E GD+ E K K +M R K V E L P+EE +
Sbjct: 340 GRFPSETTFMQ------EFGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKNLAPKEETI 391
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 392 IEVELTNIQKKYYRA 406
Score = 62 (26.9 bits), Expect = 4.8e-05, Sum P(4) = 4.8e-05
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 361 ILADEMGLGKTVELLACIF 379
ILADEMGLGKT++ + ++
Sbjct: 176 ILADEMGLGKTIQSITFLY 194
Score = 54 (24.1 bits), Expect = 4.8e-05, Sum P(4) = 4.8e-05
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 767 AEAAKLLNSLLKLRQACCHP 786
A LLN++++LR+ C HP
Sbjct: 422 ANVPNLLNTMMELRKCCNHP 441
Score = 46 (21.3 bits), Expect = 4.8e-05, Sum P(4) = 4.8e-05
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNS 537
G L++ P + W+ E T L +Y G++ S
Sbjct: 203 GPFLVIAPLSTIPNWEREFRTWTE---LNVVVYHGSQAS 238
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 132 (51.5 bits), Expect = 5.5e-05, Sum P(5) = 5.5e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 611 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 670
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 671 MPEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQIL 724
Query: 712 WLTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 725 RVEMSALQKQYYK 737
Score = 61 (26.5 bits), Expect = 5.5e-05, Sum P(5) = 5.5e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 513 ILADEMGLGKTIQTIS 528
Score = 52 (23.4 bits), Expect = 5.5e-05, Sum P(5) = 5.5e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G LIV P L W E P + +Y G +RN+ I ++ + +
Sbjct: 541 GPFLIVVPLSTLTSWQREFEIWA-P-EVNVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 598
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 599 LITTYEILLKD 609
Score = 47 (21.6 bits), Expect = 5.5e-05, Sum P(5) = 5.5e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E ++LK+N + PG
Sbjct: 1185 HNSCVSAMQEYEEQLKENASEGKGPG 1210
Score = 41 (19.5 bits), Expect = 0.00020, Sum P(5) = 0.00020
Identities = 24/104 (23%), Positives = 45/104 (43%)
Query: 765 THAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSM-DEILMVLIGKTKIEGEEALR 823
T + LN +++L++ C H + +R+ + S E+L LI + G+ L
Sbjct: 751 TRGSTSGFLNIVMELKKCCNHCYL----IRAPEDSERETGQEVLQSLI---RSSGKLILL 803
Query: 824 -KLVMALNGLAGIALIEKNLSQAVSLYKEAMAVVEEHSEDFRLD 866
KL+ L LI + + + + E + + +H RLD
Sbjct: 804 DKLLTRLRERGNRVLIFSQMVRMLDILAEYLTI--KHYPFQRLD 845
Score = 37 (18.1 bits), Expect = 5.5e-05, Sum P(5) = 5.5e-05
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 1009 DREKQYSAWWLEALHHAE 1026
DR QY W + H+ +
Sbjct: 1666 DRHHQYEQHWYKDHHYGD 1683
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 131 (51.2 bits), Expect = 5.5e-05, Sum P(5) = 5.5e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 607 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFI 666
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 667 MPEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQIL 720
Query: 712 WLTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 721 RVEMSALQKQYYK 733
Score = 61 (26.5 bits), Expect = 5.5e-05, Sum P(5) = 5.5e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 509 ILADEMGLGKTIQTIS 524
Score = 53 (23.7 bits), Expect = 5.5e-05, Sum P(5) = 5.5e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G LIV P L W E P + +Y G +RN+ I ++ + +
Sbjct: 537 GPFLIVVPLSTLTSWQREFEIWA-P-EINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 594
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 595 LITTYEILLKD 605
Score = 47 (21.6 bits), Expect = 5.5e-05, Sum P(5) = 5.5e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E ++LK+N + PG
Sbjct: 1181 HNSCVSAMQEYEEQLKENASEGKGPG 1206
Score = 37 (18.1 bits), Expect = 5.5e-05, Sum P(5) = 5.5e-05
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 1009 DREKQYSAWWLEALHHAE 1026
DR QY W + H+ +
Sbjct: 1663 DRHHQYEQHWYKDHHYGD 1680
Score = 37 (18.1 bits), Expect = 0.00046, Sum P(5) = 0.00046
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 765 THAEAAKLLNSLLKLRQACCH 785
T + LN +++L++ C H
Sbjct: 747 TRGSTSGFLNIVMELKKCCNH 767
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 114 (45.2 bits), Expect = 5.5e-05, Sum P(4) = 5.5e-05
Identities = 40/145 (27%), Positives = 66/145 (45%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
LL+RI W + +DE +++ + T Y +++R +TGTP+Q L +L+ LL F+
Sbjct: 984 LLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLNFV 1043
Query: 652 KSSPFSISRWWIEVIRDPYEN--GD--VGAMEFT--------HKFFKEIMCRSSKVHVSD 699
F+ + + E P+ N G +G E HK + + R K V
Sbjct: 1044 LPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKDV-- 1101
Query: 700 ELQLPPQEECVSWLTFSPIEEHFYQ 724
E +LP + E V S ++ YQ
Sbjct: 1102 EKELPDKVEKVIKCPLSGLQLKLYQ 1126
Score = 72 (30.4 bits), Expect = 5.5e-05, Sum P(4) = 5.5e-05
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 890 GILADEMGLGKTIQTIAFI 908
Score = 51 (23.0 bits), Expect = 5.5e-05, Sum P(4) = 5.5e-05
Identities = 15/56 (26%), Positives = 31/56 (55%)
Query: 772 LLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLVM 827
L N++++L++ C HP + R++ S ++D +L GK ++ + L KL +
Sbjct: 1148 LQNTVMQLKKICNHPFIFEDVERAIDPSGTNVD-LLWRAAGKFELL-DRILPKLFL 1201
Score = 49 (22.3 bits), Expect = 5.5e-05, Sum P(4) = 5.5e-05
Identities = 19/68 (27%), Positives = 30/68 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L W E + P S+K Y+G L T I +++LT
Sbjct: 919 GPFLIIVPLSTLTNWIMEFEKWA-P-SVKKIAYKGP--PQLRKTLQSQIRSS-NFNVLLT 973
Query: 559 TYDVLKED 566
T++ + +D
Sbjct: 974 TFEYIIKD 981
>TAIR|locus:2024198 [details] [associations]
symbol:SWI2 "switch 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GO:GO:0005524 GO:GO:0016020 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:HGNRKDN
IPI:IPI00529418 RefSeq:NP_171871.2 UniGene:At.42525
UniGene:At.42526 ProteinModelPortal:F4I2H2 SMR:F4I2H2 PRIDE:F4I2H2
EnsemblPlants:AT1G03750.1 GeneID:839417 KEGG:ath:AT1G03750
Uniprot:F4I2H2
Length = 862
Score = 82 (33.9 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLK 652
+L+ I W + DEA +++ + E L + K R +TGT +Q K+ +L+ L ++
Sbjct: 262 VLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFNLFEWV- 320
Query: 653 SSPFSISRWWIEVIRDPYE 671
+P S+ E RD Y+
Sbjct: 321 -APGSLGTR--EHFRDFYD 336
Score = 80 (33.2 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 17/66 (25%), Positives = 36/66 (54%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+CP+ I+ W++E +R K +Y G+ N + I++ + G ++++T
Sbjct: 199 GPVLIICPSSIIHNWESEFSRWA--SFFKVSVYHGS-NRDM----ILEKLKARGVEVLVT 251
Query: 559 TYDVLK 564
++D +
Sbjct: 252 SFDTFR 257
Score = 71 (30.1 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 359 GGILADEMGLGKTVELLACIFA 380
GGIL D+MGLGKT++ +A + A
Sbjct: 159 GGILGDDMGLGKTIQTIAFLAA 180
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 131 (51.2 bits), Expect = 5.6e-05, Sum P(5) = 5.6e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 592 TLLTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFL 651
T+L I W + +DEA ++++ + + + + HR ITGTP+Q L +L+ LL F+
Sbjct: 617 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFI 676
Query: 652 KSSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
F +W E + + G + HK + + R K V E LP + E +
Sbjct: 677 MPEKFE---FW-EDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDV--EKSLPAKVEQIL 730
Query: 712 WLTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 731 RVEMSALQKQYYK 743
Score = 61 (26.5 bits), Expect = 5.6e-05, Sum P(5) = 5.6e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 519 ILADEMGLGKTIQTIS 534
Score = 53 (23.7 bits), Expect = 5.6e-05, Sum P(5) = 5.6e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG---ARNSSLSDTSIMDISELVGADI 555
G LIV P L W E P + +Y G +RN+ I ++ + +
Sbjct: 547 GPFLIVVPLSTLTSWQREFEIWA-P-EINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 604
Query: 556 VLTTYDVLKED 566
++TTY++L +D
Sbjct: 605 LITTYEILLKD 615
Score = 47 (21.6 bits), Expect = 5.6e-05, Sum P(5) = 5.6e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 727 HETCVGYAREVIQRLKDNILKRNVPG 752
H +CV +E ++LK+N + PG
Sbjct: 1191 HNSCVSAMQEYEEQLKENASEGKGPG 1216
Score = 37 (18.1 bits), Expect = 5.6e-05, Sum P(5) = 5.6e-05
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 1009 DREKQYSAWWLEALHHAE 1026
DR QY W + H+ +
Sbjct: 1672 DRHHQYEQHWYKDHHYGD 1689
Score = 37 (18.1 bits), Expect = 0.00047, Sum P(5) = 0.00047
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 765 THAEAAKLLNSLLKLRQACCH 785
T + LN +++L++ C H
Sbjct: 757 TRGSTSGFLNIVMELKKCCNH 777
>CGD|CAL0002614 [details] [associations]
symbol:orf19.4502 species:5476 "Candida albicans" [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045898 "regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0042790 "transcription of nuclear large rRNA transcript from
RNA polymerase I promoter" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002614 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 InterPro:IPR022707 Pfam:PF12054 EMBL:AACQ01000142
EMBL:AACQ01000141 RefSeq:XP_712896.1 RefSeq:XP_712928.1
ProteinModelPortal:Q59TC9 STRING:Q59TC9 GeneID:3645462
GeneID:3645500 KEGG:cal:CaO19.11978 KEGG:cal:CaO19.4502
Uniprot:Q59TC9
Length = 1915
Score = 90 (36.7 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 36/143 (25%), Positives = 63/143 (44%)
Query: 600 WRIC-LDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
+ C LDE ++++ ++ ++ R+ A+HR ++GTPIQ + +L+ L FL
Sbjct: 1432 YNYCVLDEGHIIKNASSKLSKSVKRVKAEHRLILSGTPIQNNVLELWSLFDFLMPGFLGT 1491
Query: 659 SRWWIEVIRDPY---ENG-------DVGA--MEFTHKFFKEIMCRSSKVHVSDELQLPPQ 706
+ + E P N + GA ME HK M R K V +L PP+
Sbjct: 1492 EKVFHEKFAKPIAASRNSKTSSKEQEAGALAMESLHKQVLPFMLRRLKEDVLSDL--PPK 1549
Query: 707 EECVSWLTFSPIEEHFYQSQHET 729
+ S +++ Y+ +T
Sbjct: 1550 IIQDYYCELSDLQKKLYKDFAKT 1572
Score = 87 (35.7 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 18/67 (26%), Positives = 38/67 (56%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
+L++CP ++ W+ EI ++ P +K +Y G+ + + ++ AD+V+T+Y
Sbjct: 1365 SLVICPPSLIGHWEQEINQYA-P-FMKVLVYAGSPSIRIPLRG-----QIPDADVVVTSY 1417
Query: 561 DVLKEDL 567
DV + D+
Sbjct: 1418 DVCRNDV 1424
Score = 66 (28.3 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 352 YTSSYVFGGILADEMGLGKTVELLACI 378
+ + Y GIL D+MGLGKT++ + CI
Sbjct: 1315 FLNKYHLHGILCDDMGLGKTLQTI-CI 1340
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 120 (47.3 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ E + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 512 LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEP 571
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
F +++ E GD+ E K K +M R K V E +L P+EE +
Sbjct: 572 LRFPSESTFMQ------EFGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKKLAPKEETI 623
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 624 IEVELTNIQKKYYRA 638
Score = 62 (26.9 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 361 ILADEMGLGKTVELLACIF 379
ILADEMGLGKT++ + ++
Sbjct: 408 ILADEMGLGKTIQSITFLY 426
Score = 48 (22.0 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 659 LVNTMMELRKCCNHP 673
Score = 47 (21.6 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G LI+ P +A W+ E T + +Y G+
Sbjct: 435 GPFLIIAPLSTIANWEREFRTWT---DINVVVYHGS 467
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 112 (44.5 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 668 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 727
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 728 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--EA 785
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S ++ Y+
Sbjct: 786 QLPEKVEYVIKCDMSALQRVLYR 808
Score = 73 (30.8 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 574 GILADEMGLGKTIQTIALI 592
Score = 48 (22.0 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 834 LMNTIMQLRKICNHP 848
Score = 47 (21.6 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G+ + + + + +++LT
Sbjct: 603 GPFLIIVPLSTLSNWAYEFDKWA-PSVVKVS-YKGSPAARRAFVPQLRSGKF---NVLLT 657
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 658 TYEYIIKD 665
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 118 (46.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 43/163 (26%), Positives = 76/163 (46%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSD--TSIMDISELVGADIV 556
G L+VCPA +L W+ E+ R P S Y GA ++ S S+ + +++
Sbjct: 264 GPHLVVCPASVLENWEREL-RKWCP-SFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVL 321
Query: 557 LTTYDVLKEDLSHDSDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQMVESNAAA 616
L Y + + H S++ + DR+ + KR+ W + +DEA ++ +
Sbjct: 322 LVCYSLFER---H-SEQQKDDRKVL---KRWR----------WSCVLMDEAHALKDKNSY 364
Query: 617 ATE--MALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFS 657
+ M++ A R +TGTP+Q L +L+ LL F+ F+
Sbjct: 365 RWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFT 407
Score = 66 (28.3 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 359 GGILADEMGLGKTVELL 375
G ILADEMGLGKT++ +
Sbjct: 234 GAILADEMGLGKTIQAI 250
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 112 (44.5 bits), Expect = 7.3e-05, Sum P(4) = 7.3e-05
Identities = 37/154 (24%), Positives = 73/154 (47%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W + +DEA +++ ++ + +TGTPIQ L +LY LL F++ FS
Sbjct: 170 WSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSK 229
Query: 659 SRW--WIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ +++ +D E A E +K + + R K V+ EL P + E V + S
Sbjct: 230 EQVEDFVQRYQD-IEKESESASEL-YKLLQPFLLRRVKAEVATEL--PRKTEVVIYHGMS 285
Query: 717 PIEEHFYQS-QHETCVGYAREVIQRLK-DNILKR 748
+++ +Y++ + + E +++K N+L +
Sbjct: 286 ALQKKYYKAILMKDLDAFENETAKKVKLQNVLSQ 319
Score = 79 (32.9 bits), Expect = 7.3e-05, Sum P(4) = 7.3e-05
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+CP +L+ W E+ R PG L Y G ++ D+ + ++LT
Sbjct: 98 GPFLILCPLSVLSNWKEEMERFA-PG-LSCVTYAGDKDKRACLQQ--DLKQESRFHVLLT 153
Query: 559 TYDVLKEDLS 568
TY++ +D S
Sbjct: 154 TYEICLKDAS 163
Score = 43 (20.2 bits), Expect = 7.3e-05, Sum P(4) = 7.3e-05
Identities = 19/85 (22%), Positives = 37/85 (43%)
Query: 767 AEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKLV 826
A+ KL N L +LR+ HP + ++ P + + L+ GK + L KL+
Sbjct: 308 AKKVKLQNVLSQLRKCVDHPYL----FDGVEPEPFEIGDHLIEASGKLHL-----LDKLL 358
Query: 827 MALNGLAGIALIEKNLSQAVSLYKE 851
L L+ ++Q + + ++
Sbjct: 359 AFLYSKGHRVLLFSQMTQMLDILQD 383
Score = 39 (18.8 bits), Expect = 7.3e-05, Sum P(4) = 7.3e-05
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 291 RPYQRRAAYWMVQ 303
RPYQ + W+ Q
Sbjct: 49 RPYQLQGVNWLAQ 61
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 119 (46.9 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 38/143 (26%), Positives = 64/143 (44%)
Query: 594 LTRIFWWRICLDEAQMVES-NAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLK 652
L R W + +DE +++ N E+ + L ++ +TGTP+Q L +L+ LL FL
Sbjct: 353 LQRFHWNYLIVDEGHRIKNLNCRLVQELKM-LPTDNKLLLTGTPLQNNLSELWSLLNFLL 411
Query: 653 SSPF----SISRWW-IEVIRDPYEN-----GDVGAMEFTHKFFKEIMCRSSKVHVSDELQ 702
F S W+ I I EN + + H + R K V+ L+
Sbjct: 412 PDVFDDLKSFESWFDISTITSDAENIVANEREQNILHMLHLILTPFLLRRLKSDVT--LE 469
Query: 703 LPPQEECVSWLTFSPIEEHFYQS 725
+PP++E V + + +E FY +
Sbjct: 470 VPPKKEIVVYAPLTNKQEAFYMA 492
Score = 71 (30.1 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 254 GILADEMGLGKTIQCIAHI 272
Score = 40 (19.1 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 746 LKRNVPGHASSDALYNPII-THAEA-AKLLNSLLKLRQACCH 785
+++ + ASS + N + A+ KL N L+ L++ C H
Sbjct: 548 VQQELDSQASSTPVVNVFMPVDAQVNLKLQNILMLLKRCCNH 589
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 116 (45.9 bits), Expect = 7.7e-05, Sum P(4) = 7.7e-05
Identities = 33/132 (25%), Positives = 66/132 (50%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L +I W I +DEA +++ + +++ +++R ITGTP+Q L +L+ LL FL
Sbjct: 313 LKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLP 372
Query: 654 SPFSISRWWIEVIR-DPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
FS ++ + + + E ++ H + + R K V E L P++E +
Sbjct: 373 DIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDV--ETSLLPKKELNLY 430
Query: 713 LTFSPIEEHFYQ 724
+ S +++ +Y+
Sbjct: 431 VGMSSMQKKWYK 442
Score = 65 (27.9 bits), Expect = 7.7e-05, Sum P(4) = 7.7e-05
Identities = 12/17 (70%), Positives = 16/17 (94%)
Query: 360 GILADEMGLGKTVELLA 376
GILADEMGLGKT++ ++
Sbjct: 217 GILADEMGLGKTLQTIS 233
Score = 56 (24.8 bits), Expect = 7.7e-05, Sum P(4) = 7.7e-05
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 771 KLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEALRKL 825
+LLN +++LR+ C HP + G P + DE L+ K ++ ++ L+KL
Sbjct: 464 RLLNIMMQLRKCCNHPYL-FDGAEP--GPPYTTDEHLVYNAAKLQVL-DKLLKKL 514
Score = 40 (19.1 bits), Expect = 7.7e-05, Sum P(4) = 7.7e-05
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 291 RPYQRRAAYWMVQREK 306
RPYQ + W+V K
Sbjct: 197 RPYQIQGVNWLVSLHK 212
>SGD|S000006003 [details] [associations]
symbol:MOT1 "Essential protein involved in regulation of
transcription" species:4932 "Saccharomyces cerevisiae" [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0000228 "nuclear chromosome" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045898 "regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IMP;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000006003 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003677 GO:GO:0016887 EMBL:BK006949
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:U41849 GO:GO:0000228 GO:GO:0006364
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0042790 GO:GO:0045898 OrthoDB:EOG44XNQZ
EMBL:M83224 PIR:S22775 RefSeq:NP_015243.1 ProteinModelPortal:P32333
SMR:P32333 DIP:DIP-2418N IntAct:P32333 MINT:MINT-623118
STRING:P32333 PaxDb:P32333 PeptideAtlas:P32333 PRIDE:P32333
EnsemblFungi:YPL082C GeneID:856023 KEGG:sce:YPL082C CYGD:YPL082c
GeneTree:ENSGT00630000089754 NextBio:980935 Genevestigator:P32333
GermOnline:YPL082C Uniprot:P32333
Length = 1867
Score = 89 (36.4 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLTTY 560
+LI+CP + W+ E ++ P LK +Y G L T +S+ ADI++T+Y
Sbjct: 1335 SLIICPPSLTGHWENEFDQYA-P-FLKVVVYAGGPTVRL--TLRPQLSD---ADIIVTSY 1387
Query: 561 DVLKEDLS 568
DV + DL+
Sbjct: 1388 DVARNDLA 1395
Score = 86 (35.3 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 600 WRIC-LDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
+ C LDE +++++ + + + A HR +TGTPIQ + +L+ L FL
Sbjct: 1402 YNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGFLGT 1461
Query: 659 SRWWIEVIRDPY------------ENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQ 706
+ + E P + V A+E HK M R K V +L PP+
Sbjct: 1462 EKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDL--PPK 1519
Score = 70 (29.7 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 352 YTSSYVFGGILADEMGLGKTVELLACIFA 380
+ + Y GIL D+MGLGKT++ + CI A
Sbjct: 1285 FLNKYHLHGILCDDMGLGKTLQTI-CIIA 1312
Score = 42 (19.8 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 190 EILKSAFDACESLLENSR-KTWKKSMINVMS-WLRP 223
E+L+ +FD +LLE+ + K +K++ +V S L+P
Sbjct: 603 ELLQLSFDVYVALLEHYKVKHTEKTLDHVFSKHLQP 638
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 162 LASMEFLTLRPTLGITFSEDMSSLRV-RVEILKSAFDACE-SLLENSRKTWKK--SMINV 217
L S E T P L +TF S+L V R ++ D + S +E T ++ ++N
Sbjct: 1105 LRSSEVFTRFPVL-LTFLR--SNLSVFRYSAARTFADLAKISSVEVMAYTIREILPLMNS 1161
Query: 218 MSWLRPEVLTSEARYGVSKSMEMDV 242
L ++E Y +S SME DV
Sbjct: 1162 AGSLSDRQGSTELIYHLSLSMETDV 1186
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 123 (48.4 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ + + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 937 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 996
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
S F E ++D GD+ E K K +M R K V E L P++E +
Sbjct: 997 SQFPSES---EFLKD---FGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKNLAPKQETI 1048
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 1049 IEVELTNIQKKYYRA 1063
Score = 63 (27.2 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ +A
Sbjct: 833 ILADEMGLGKTIQSIA 848
Score = 57 (25.1 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 766 HAEAAKLLNSLLKLRQACCHP 786
H LLN++++LR+ C HP
Sbjct: 1078 HTNMPNLLNTMMELRKCCNHP 1098
Score = 48 (22.0 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G L++ P + W+ E T + T +Y G+
Sbjct: 860 GPFLVIAPLSTITNWEREFNTWTE---MNTIVYHGS 892
Score = 44 (20.5 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 903 EKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDR 954
E AFK+ I K QR +R E +DF G D F+ DR
Sbjct: 1781 EAAFKLKEIA----RREKQQRWTRREQTDFYRVVSTFGVEYDPDNMQFHWDR 1828
Score = 39 (18.8 bits), Expect = 0.00025, Sum P(5) = 0.00025
Identities = 12/59 (20%), Positives = 21/59 (35%)
Query: 894 NEQHFPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPS-GHLSDLSENGFN 951
+ H PG + T A + + E++ + D +D D SE F+
Sbjct: 2504 HHHHHPGLRTTGYPSSPATTTSGTALRLPTLQHEDDDEEEDEDDDDLSQGYDSSERDFS 2562
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 123 (48.4 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ + + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 939 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 998
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
S F E ++D GD+ E K K +M R K V E L P++E +
Sbjct: 999 SQFPSES---EFLKD---FGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKNLAPKQETI 1050
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 1051 IEVELTNIQKKYYRA 1065
Score = 63 (27.2 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ +A
Sbjct: 835 ILADEMGLGKTIQSIA 850
Score = 57 (25.1 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 766 HAEAAKLLNSLLKLRQACCHP 786
H LLN++++LR+ C HP
Sbjct: 1080 HTNMPNLLNTMMELRKCCNHP 1100
Score = 48 (22.0 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G L++ P + W+ E T + T +Y G+
Sbjct: 862 GPFLVIAPLSTITNWEREFNTWTE---MNTIVYHGS 894
Score = 44 (20.5 bits), Expect = 8.5e-05, Sum P(5) = 8.5e-05
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 903 EKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDR 954
E AFK+ I K QR +R E +DF G D F+ DR
Sbjct: 1783 EAAFKLKEIA----RREKQQRWTRREQTDFYRVVSTFGVEYDPDNMQFHWDR 1830
Score = 40 (19.1 bits), Expect = 0.00020, Sum P(5) = 0.00020
Identities = 13/59 (22%), Positives = 21/59 (35%)
Query: 894 NEQHFPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPS-GHLSDLSENGFN 951
+ H PG + T A + + E++ + D ED D SE F+
Sbjct: 2505 HHHHHPGLRTTGYPSSPATTTSGTALRLPTLQPEDDDEEEDEEDDDLSQGYDSSERDFS 2563
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 126 (49.4 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 40/161 (24%), Positives = 72/161 (44%)
Query: 568 SHDSDRHEGDR-RFMRFQKRYPVI---PTLLTRIFWWRICLDEAQMVESNAAAATEMALR 623
+H+ H+ R +F Y ++ L + W I +DEA ++++ + + +
Sbjct: 573 THEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLID 632
Query: 624 LYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIRDPYENGDVGAMEFTHK 683
+ HR ITGTP+Q L +L+ LL F+ FS W E + + G HK
Sbjct: 633 FKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS--SW--EDFEEEHGKGREYGYASLHK 688
Query: 684 FFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQ 724
+ + R K V E LP + E + + S +++ +Y+
Sbjct: 689 ELEPFLLRRVKKDV--EKSLPAKVEQILRMEMSALQKQYYK 727
Score = 61 (26.5 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ ++
Sbjct: 503 ILADEMGLGKTIQTIS 518
Score = 52 (23.4 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 880 ILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENARKCQR-----VSREENSDFTD 934
+LP + NCA ++S N + + ++ E R +R + RE F+D
Sbjct: 1069 MLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRENIKGFSD 1128
Query: 935 AE 936
AE
Sbjct: 1129 AE 1130
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 126 (49.4 bits), Expect = 9.5e-05, Sum P(5) = 9.5e-05
Identities = 38/133 (28%), Positives = 61/133 (45%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W + LDEAQ +++ + ++ L + R +TGTP+Q L +L+ L+ FL FS
Sbjct: 1036 WKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSS 1095
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
R + E +P G ME+ HK + + R K V E Q+P + E V
Sbjct: 1096 HREFKEWFSNPMTGMIEGNMEYNETLITRLHKVIRPFLLRRLKKEV--EKQMPKKYEHVI 1153
Query: 712 WLTFSPIEEHFYQ 724
S + + Y+
Sbjct: 1154 TCRLSNRQRYLYE 1166
Score = 75 (31.5 bits), Expect = 9.5e-05, Sum P(5) = 9.5e-05
Identities = 15/22 (68%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ +A + AH
Sbjct: 935 GILADEMGLGKTIQTIA-LLAH 955
Score = 50 (22.7 bits), Expect = 9.5e-05, Sum P(5) = 9.5e-05
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGAR 535
G LIV P+ ++ W+ E + PG K Y G++
Sbjct: 964 GPHLIVVPSSVMLNWEMEFKKWC-PG-FKILTYYGSQ 998
Score = 48 (22.0 bits), Expect = 9.5e-05, Sum P(5) = 9.5e-05
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 772 LLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEI 806
++N L++LR+ C HP + + R SP MD I
Sbjct: 1186 VINVLMQLRKVCNHPNMFEA--RPTI-SPFQMDGI 1217
Score = 40 (19.1 bits), Expect = 9.5e-05, Sum P(5) = 9.5e-05
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 930 SDFTDAEDPSGHLSDLSENGFNGDR 954
S T A P+G LS LS + G R
Sbjct: 1364 SSSTTASSPTGALSVLSNSKLLGAR 1388
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 111 (44.1 bits), Expect = 9.5e-05, Sum P(5) = 9.5e-05
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 846 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFL 905
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 906 LPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--ES 963
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S +++ Y+
Sbjct: 964 QLPEKVEYVIKCDMSALQKILYR 986
Score = 73 (30.8 bits), Expect = 9.5e-05, Sum P(5) = 9.5e-05
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 752 GILADEMGLGKTIQTIALI 770
Score = 50 (22.7 bits), Expect = 9.5e-05, Sum P(5) = 9.5e-05
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 769 AAKLLNSLLKLRQACCHP 786
A L+N++++LR+ C HP
Sbjct: 1009 AKTLMNTIMQLRKICNHP 1026
Score = 46 (21.3 bits), Expect = 9.5e-05, Sum P(5) = 9.5e-05
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G S + + +++LT
Sbjct: 781 GPYLIIVPLSTLSNWTYEFDKWA-PSVVKIS-YKGTPAMRRSLVPQLRSGKF---NVLLT 835
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 836 TYEYIIKD 843
Score = 43 (20.2 bits), Expect = 9.5e-05, Sum P(5) = 9.5e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 153 DEGITGLVHLASMEFLTLRP 172
D+GI VH SM+ ++RP
Sbjct: 82 DKGIVEDVHCGSMKGTSMRP 101
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 123 (48.4 bits), Expect = 0.00010, Sum P(5) = 0.00010
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ + + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 937 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 996
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
S F E ++D GD+ E K K +M R K V E L P++E +
Sbjct: 997 SQFPSES---EFLKD---FGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKNLAPKQETI 1048
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 1049 IEVELTNIQKKYYRA 1063
Score = 63 (27.2 bits), Expect = 0.00010, Sum P(5) = 0.00010
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ +A
Sbjct: 833 ILADEMGLGKTIQSIA 848
Score = 57 (25.1 bits), Expect = 0.00010, Sum P(5) = 0.00010
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 766 HAEAAKLLNSLLKLRQACCHP 786
H LLN++++LR+ C HP
Sbjct: 1078 HTNMPNLLNTMMELRKCCNHP 1098
Score = 48 (22.0 bits), Expect = 0.00010, Sum P(5) = 0.00010
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G L++ P + W+ E T + T +Y G+
Sbjct: 860 GPFLVIAPLSTITNWEREFNTWTE---MNTIVYHGS 892
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(5) = 0.00010
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 903 EKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSENGFNGDR 954
E AFK+ I K QR +R E +DF G D F+ DR
Sbjct: 1781 EAAFKLKEIA----RREKQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDR 1828
Score = 41 (19.5 bits), Expect = 0.00016, Sum P(5) = 0.00016
Identities = 16/61 (26%), Positives = 23/61 (37%)
Query: 894 NEQHFPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHLS---DLSENGF 950
+ H PG + + T + + EE+ D D ED LS D SE F
Sbjct: 2504 HHHHHPGLRAPGYPSSPVTTASGTTLRLPPLQPEEDDD-EDEEDDDD-LSQGYDSSERDF 2561
Query: 951 N 951
+
Sbjct: 2562 S 2562
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 110 (43.8 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 39/178 (21%), Positives = 84/178 (47%)
Query: 554 DIVLTTYDVLKEDL--SHDSDRHEGDR-RFMRFQKRYPVI-P--TLLTRIFWWRICLDEA 607
++V+ T D D+ H+ EG + +F Y ++ P ++L+ I W + +DE
Sbjct: 299 NVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEG 358
Query: 608 QMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSISRWWIEVIR 667
+++ + + +KH +TGTP+Q L++L+ L+ FL + F +E +
Sbjct: 359 HRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGS----LEKFQ 414
Query: 668 DPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFSPIEEHFYQS 725
D + + + H+ + R K V + ++PP++E + + S ++ Y++
Sbjct: 415 DINKEEQISRL---HQMLAPHLLRRLKKDVLKD-KVPPKKELILRVDMSSQQKEVYKA 468
Score = 67 (28.6 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 763 IITHAEAAKLLNSLLKLRQACCHP 786
++T AK+ N L+KLRQ C HP
Sbjct: 476 VLTKKRDAKISNVLMKLRQVCSHP 499
Score = 63 (27.2 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 361 ILADEMGLGKTVELLA 376
ILADEMGLGKT++ +A
Sbjct: 247 ILADEMGLGKTIQSIA 262
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 149 FDAPDEGITGLVHLASMEFL 168
FD E +TG +H +E L
Sbjct: 214 FDLTPEFLTGTLHTYQLEGL 233
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 78 REEFSGFIISEDFYQVSRYTLRL 100
REEF F ++ +F + +T +L
Sbjct: 208 REEFKQFDLTPEFLTGTLHTYQL 230
>UNIPROTKB|G4NCX0 [details] [associations]
symbol:MGG_00338 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194
GO:GO:0005524 EMBL:CM001235 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 RefSeq:XP_003718744.1
EnsemblFungi:MGG_00338T0 GeneID:2674989 KEGG:mgr:MGG_00338
Uniprot:G4NCX0
Length = 1151
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 490 EATDSPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISE 549
E +D + A+L++ P +L QW EIT+HT P L+T + AR T I +
Sbjct: 387 EQSDKLYLSCASLVIVPTNLLEQWKDEITKHT-P-YLRTLVLTKAR----VPTPIPNALS 440
Query: 550 LVGADIVLTTYDVLKEDLSHD-SDRHEGDRRFMRFQKRYPVIPTLLTRIFWWRICLDEAQ 608
L+ DI+L + + + + DRH G V+ + L ++ + RI +DE
Sbjct: 441 LLQYDIILVSMSRFERLIENRIKDRH-GSW----------VLLSPLGQVHFKRIIIDEGH 489
Query: 609 MV-ESNAAAATEMAL---RLYAKHRWCITGTPIQRKLDDLYGL 647
+ S A + + L L RW +TGTP + LYG+
Sbjct: 490 ALGHSTLAKKSNLLLVVEHLQTSARWVVTGTPSK----GLYGV 528
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 36/105 (34%), Positives = 48/105 (45%)
Query: 293 YQRRAAYWMVQREKGDXXXXXXXXXXXXXXPLCMPMDFLDTYSTLFYNPFSGSLSLSPDY 352
YQR AA M QRE LC +D + F++ +G + L
Sbjct: 225 YQREAAASMFQRETQPLQCIDPR--------LCYVVDQHE--DPWFFDCITGEV-LKDGR 273
Query: 353 TSSYVFGGILADEMGLGKTVELLACIFAHRK-PASDDSIFIDTAV 396
+ V GGILA+EMG GKT+ LA I A R+ PA I+ A+
Sbjct: 274 SYEGVSGGILAEEMGSGKTLICLALIAATRQQPAYRPEIYTAPAI 318
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 174 LGITFSEDMSSLRVRVEILKSAFDACESLLENSRKTWKKSMINVMSWL 221
L T S+D + + + + D SL+ S KT ++ +++S L
Sbjct: 100 LEFTRSQDDADVNALIRVYLLPDDKDRSLINRSNKTLRRHWNSLLSKL 147
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 120 (47.3 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ E + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 985 LNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEP 1044
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
F +++ E GD+ E K K +M R K V E +L P+EE +
Sbjct: 1045 LRFPSESTFMQ------EFGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKKLAPKEETI 1096
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 1097 IEVELTNIQKKYYRA 1111
Score = 62 (26.9 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 361 ILADEMGLGKTVELLACIF 379
ILADEMGLGKT++ + ++
Sbjct: 881 ILADEMGLGKTIQSITFLY 899
Score = 59 (25.8 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 897 HFPGCSEK-AFKIHSIETCDENARKCQRVSREENSDFTDAEDPSG-HLSDLSEN 948
H P S+ AF + ++ D ++ K + +EENS D E+ G S L+EN
Sbjct: 2804 HLPTLSQSNAFDVQKNKSDDLDSSKSVEI-KEENSRVRDQEEKGGTEPSPLNEN 2856
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 1132 LVNTMMELRKCCNHP 1146
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G LI+ P +A W+ E T + +Y G+
Sbjct: 908 GPFLIIAPLSTIANWEREFRTWT---DINVVVYHGS 940
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 111 (44.1 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 844 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFL 903
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 904 LPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--ES 961
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S +++ Y+
Sbjct: 962 QLPEKVEYVIKCDMSALQKILYR 984
Score = 73 (30.8 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 750 GILADEMGLGKTIQTIALI 768
Score = 50 (22.7 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 769 AAKLLNSLLKLRQACCHP 786
A L+N++++LR+ C HP
Sbjct: 1007 AKTLMNTIMQLRKICNHP 1024
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G S + + +++LT
Sbjct: 779 GPYLIIVPLSTLSNWTYEFDKWA-PSVVKIS-YKGTPAMRRSLVPQLRSGKF---NVLLT 833
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 834 TYEYIIKD 841
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 153 DEGITGLVHLASMEFLTLRP 172
D+GI VH SM+ ++RP
Sbjct: 82 DKGIVEDVHCGSMKGTSMRP 101
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 120 (47.3 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 600 WR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
WR + LDEAQ +++ + + L ++ R +TGTP+Q L +L+ L+ FL F
Sbjct: 750 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQS 809
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECV 710
R + E +P G+ E+ HK + + R KV V E Q+P + E V
Sbjct: 810 HREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDV--EKQMPKKYEHV 866
Score = 72 (30.4 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ ++ + AH
Sbjct: 649 GILADEMGLGKTIQTIS-LLAH 669
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGAR 535
G LI+ P ++ W+ E+ R P S K Y GA+
Sbjct: 678 GPHLIIVPTSVMLNWEMELKRWC-P-SFKILTYYGAQ 712
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 772 LLNSLLKLRQACCHPQV 788
++N L++LR+ C HP +
Sbjct: 900 VINILMQLRKVCNHPNL 916
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 32 PHGSEQPEKEELA---DVDHPF--FVEVNRTCWLLDEHLDISEIVLTDLKLREE 80
P G E+ +EE + +VD P + N+ CW DE D E + + +E
Sbjct: 363 PDGPEENIEEEPSQDLEVDPPSSSVTQCNKQCWHPDE--DDEEFTANEDEAEDE 414
Score = 41 (19.5 bits), Expect = 0.00035, Sum P(5) = 0.00035
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 779 LRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTKIEGEEAL 822
L + C+ + LR +Q + L VL+ + K EG L
Sbjct: 2008 LHRIVCNMRTQFPDLRLIQYDCAGKLQTLAVLLRQLKAEGHRVL 2051
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 128 (50.1 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 30/88 (34%), Positives = 50/88 (56%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFLK 652
L++I W I +DE ++ NA+ L+ Y + HR +TGTP+Q L++L+ LL FL
Sbjct: 873 LSKIHWHYIIIDEGHRIK-NASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLL 931
Query: 653 SSPFSISRWWIEVIRDPYE-NGDVGAME 679
+ F+ S + + P++ NG+ A E
Sbjct: 932 PNIFNSSEDFSQWFNKPFQSNGESSAEE 959
Score = 78 (32.5 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 360 GILADEMGLGKTVELLACIFAHRKPASDDSIF---IDTAVQVTDDQKVNLRRLKRERVEC 416
GILADEMGLGKTV++++ I + +D F + ++V ++N ++
Sbjct: 775 GILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKI-V 833
Query: 417 ICGAVSESRK 426
CG E RK
Sbjct: 834 YCGTPDERRK 843
Score = 48 (22.0 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 764 ITHAEAAKLLNSLLKLRQACCHP 786
I +A++ + NS+++LR C HP
Sbjct: 1024 IGNAKSRAVHNSVMELRNICNHP 1046
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 15/74 (20%), Positives = 30/74 (40%)
Query: 875 HNLTEILPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENAR-KCQRVSREENSD-F 932
H L +I +N ++ E PG +H + ++ E++ +
Sbjct: 2814 HQLADIQAEPSNLVDQMDIEESKEPGTESADVSLHQLADIQPGPSILVDQMDTEKSKEPG 2873
Query: 933 TDAEDPSGH-LSDL 945
T++ D S H L+D+
Sbjct: 2874 TESADVSLHQLADI 2887
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 687 EIMCRSSKVHVSDELQLPPQEECV 710
E++ S++ ++QLPP E V
Sbjct: 2977 ELVDVSAECSTEPQVQLPPSSEPV 3000
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 111 (44.1 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 846 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFL 905
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 906 LPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--ES 963
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S +++ Y+
Sbjct: 964 QLPEKVEYVIKCDMSALQKILYR 986
Score = 73 (30.8 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 752 GILADEMGLGKTIQTIALI 770
Score = 50 (22.7 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 769 AAKLLNSLLKLRQACCHP 786
A L+N++++LR+ C HP
Sbjct: 1009 AKTLMNTIMQLRKICNHP 1026
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G S + + +++LT
Sbjct: 781 GPYLIIVPLSTLSNWTYEFDKWA-PSVVKIS-YKGTPAMRRSLVPQLRSGKF---NVLLT 835
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 836 TYEYIIKD 843
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 153 DEGITGLVHLASMEFLTLRP 172
D+GI VH SM+ ++RP
Sbjct: 82 DKGIVEDVHCGSMKGTSMRP 101
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 124 (48.7 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 599 WWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W + LDEAQ +++ + + L + A+ R +TGTP+Q L +L+ L+ FL + FS
Sbjct: 680 WQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSLMHFLMPTIFSS 739
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECVS 711
+ + +P G MEF HK + + R K V E QLP + E +
Sbjct: 740 HDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRRLKKEV--EKQLPEKTEHIV 797
Query: 712 WLTFSPIEEHFY 723
+ S + + Y
Sbjct: 798 NCSLSKRQRYLY 809
Score = 74 (31.1 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 360 GILADEMGLGKTVELLACIFAHRKPASDDSIF 391
GILADEMGLGKT++ ++ + AH A +SI+
Sbjct: 579 GILADEMGLGKTIQTIS-LLAHM--ACSESIW 607
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 772 LLNSLLKLRQACCHPQV 788
+LN +++LR+ C HP +
Sbjct: 830 VLNIVMQLRKCCNHPNL 846
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEG 533
G LIV P ++ W+ E + P +LK Y G
Sbjct: 608 GPHLIVVPTSVILNWEMEFKKWC-P-ALKILTYFG 640
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 134 (52.2 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 37/133 (27%), Positives = 68/133 (51%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYA-KHRWCITGTPIQRKLDDLYGLLRFLK 652
L +I W + +DEA +++ E L+L A +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 586 LKKIHWSCVIIDEAHRLKNRNCKLLE-GLKLMALEHKVLLTGTPLQNSVEELFSLLNFLE 644
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
S F ++E D V ++ K +M R K V E L P++E +
Sbjct: 645 PSQFPSETAFLEEFGDLKTEEQVKKLQ---SILKPMMLRRLKDDV--EKNLAPKQETIIE 699
Query: 713 LTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 700 VELTNIQKKYYRA 712
Score = 59 (25.8 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 11/13 (84%), Positives = 13/13 (100%)
Query: 361 ILADEMGLGKTVE 373
ILADEMGLGKT++
Sbjct: 482 ILADEMGLGKTIQ 494
Score = 49 (22.3 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 733 LINTMMELRKCCNHP 747
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 28/135 (20%), Positives = 49/135 (36%)
Query: 801 LSMDEILMVLIGKTKIEGEEALRKLVMALNGLAGIALIEKNLSQAVSLYKEAMAVVEEHS 860
L+ DE L+ +T G++AL + G G + + + A+S ++ H
Sbjct: 1696 LTHDESLLPGSLETMRYGKKALSQEPGPFQGSTGASTESRQDTAAISAGRDGNCQPRGHE 1755
Query: 861 EDFRLDPLLNIHLHHNLTEI-LPMVANCATELSQNEQHFPGCSEKAFKIHSIETCDENAR 919
DP L + ++ + + LS+ + GCSE + I D N
Sbjct: 1756 AKIASDPSFMETLEAGVAQMNIKNEKHLLISLSKEGEL--GCSEAGPRPERIGQLDPNCF 1813
Query: 920 KCQRVSREENSDFTD 934
+ S F D
Sbjct: 1814 ASPSLDPGNESGFVD 1828
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNS 537
G LI+ P + W+ E T ++ +Y G++ S
Sbjct: 509 GPFLIIAPLSTITNWEREFRTWTEMNAI---VYHGSQIS 544
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 111 (44.1 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 813 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFL 872
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 873 LPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--ES 930
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S +++ Y+
Sbjct: 931 QLPEKVEYVIKCDMSALQKILYR 953
Score = 73 (30.8 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 719 GILADEMGLGKTIQTIALI 737
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 769 AAKLLNSLLKLRQACCHP 786
A L+N++++LR+ C HP
Sbjct: 976 AKTLMNTIMQLRKICNHP 993
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G S + + +++LT
Sbjct: 748 GPYLIIVPLSTLSNWTYEFDKWA-PSVVKIS-YKGTPAMRRSLVPQLRSGKF---NVLLT 802
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 803 TYEYIIKD 810
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 111 (44.1 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 821 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFL 880
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 881 LPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--ES 938
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S +++ Y+
Sbjct: 939 QLPEKVEYVIKCDMSALQKILYR 961
Score = 73 (30.8 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 727 GILADEMGLGKTIQTIALI 745
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 769 AAKLLNSLLKLRQACCHP 786
A L+N++++LR+ C HP
Sbjct: 984 AKTLMNTIMQLRKICNHP 1001
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G S + + +++LT
Sbjct: 756 GPYLIIVPLSTLSNWTYEFDKWA-PSVVKIS-YKGTPAMRRSLVPQLRSGKF---NVLLT 810
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 811 TYEYIIKD 818
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 114 (45.2 bits), Expect = 0.00016, Sum P(6) = 0.00016
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 841 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 900
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 901 LPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--ES 958
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S I++ Y+
Sbjct: 959 QLPEKVEYVIKCDMSAIQKVLYR 981
Score = 69 (29.3 bits), Expect = 0.00016, Sum P(6) = 0.00016
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ + I
Sbjct: 747 GILADEMGLGKTIQTIGLI 765
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(6) = 0.00016
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E+ + P +K Y+G + S + + ++++T
Sbjct: 776 GPYLIIVPLSTLSNWVYELDKWA-PSIVKIA-YKGTPSMRRSLVPQLRSGKF---NVLIT 830
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 831 TYEYIIKD 838
Score = 47 (21.6 bits), Expect = 0.00016, Sum P(6) = 0.00016
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 769 AAKLLNSLLKLRQACCHP 786
A L+N++++L++ C HP
Sbjct: 1004 AKTLMNTIMQLKKICNHP 1021
Score = 45 (20.9 bits), Expect = 0.00016, Sum P(6) = 0.00016
Identities = 10/38 (26%), Positives = 24/38 (63%)
Query: 911 IETCDENARKCQRVSREENSDFTDAEDPSGHLSDLSEN 948
+++ ++AR Q+++REE+ D +D +D + S++
Sbjct: 1479 LQSVFKSAR--QKIAREESDDESDDDDEEDESEEESKS 1514
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(6) = 0.00016
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 327 PMDFLDTYSTLFYNPFSGSLSLSPDYTSSYVFGG 360
P +D +S + +P + P++ S + GG
Sbjct: 109 PQSPMDQHSQGYMSPHPSPMGQVPEHVPSPMSGG 142
>ASPGD|ASPL0000018137 [details] [associations]
symbol:AN4187 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 EMBL:BN001302
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI
InterPro:IPR022707 Pfam:PF12054 EMBL:AACD01000068 OrthoDB:EOG44XNQZ
RefSeq:XP_661791.1 ProteinModelPortal:Q5B5J3 STRING:Q5B5J3
EnsemblFungi:CADANIAT00004481 GeneID:2873610 KEGG:ani:AN4187.2
Uniprot:Q5B5J3
Length = 1904
Score = 97 (39.2 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 31/119 (26%), Positives = 52/119 (43%)
Query: 600 WRIC-LDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
W C LDE ++++ A T R+ + HR ++GTPIQ + +L+ L FL
Sbjct: 1448 WNYCVLDEGHLIKNPKAKVTMAVKRINSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGT 1507
Query: 659 SRWWIEVIRDPYENG---------DVGAM--EFTHKFFKEIMCRSSKVHVSDELQLPPQ 706
+ +++ P + GA+ E HK + R K V ++L PP+
Sbjct: 1508 EKVFLDRFAKPIATSRFSKSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDL--PPK 1564
Score = 76 (31.8 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 501 TLIVCPAPILAQWDAEITRHTRPGSLKTCI-YEG--ARNSSLSDTSIMDISELVGADIVL 557
+LI+CP + W E+ ++ P C+ Y G A S L + L ADIV+
Sbjct: 1381 SLIICPPSLSGHWQQEVKQYA-P--FLNCVAYVGPPAERSKLQGS-------LADADIVV 1430
Query: 558 TTYDVLKED 566
T+YD+ + D
Sbjct: 1431 TSYDICRND 1439
Score = 72 (30.4 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 352 YTSSYVFGGILADEMGLGKTVELLACIFA--HRKPASD 387
+ + Y GIL D+MGLGKT++ + CI A H A D
Sbjct: 1331 FLNRYNLHGILCDDMGLGKTLQTI-CIVASDHHMRAED 1367
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 900 GCSEKAFKIHSIETCDENARKCQR---VSREENSDFTDAE----DPSGHLSDLS 946
G SEKA K H + R C V +E + + + + + +L D+S
Sbjct: 1597 GSSEKADKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQYLQEKKSYLRDVS 1650
>UNIPROTKB|J9NZH0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
Length = 850
Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 598 FWWR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPF 656
F WR + +DEA +++ + +E+ + +R +TGTP+Q L +L+ LL FL F
Sbjct: 95 FHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF 154
Query: 657 SISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSWLTFS 716
+ + + GD +E H K + R K V E LPP++E +L S
Sbjct: 155 NSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV--EKSLPPKKEIKVYLGLS 212
Query: 717 PIEEHFY 723
++ ++
Sbjct: 213 KMQREWF 219
>UNIPROTKB|Q5T890 [details] [associations]
symbol:RAD26L "Putative DNA repair and recombination
protein RAD26-like" species:9606 "Homo sapiens" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006281
GO:GO:0005815 HSSP:Q97XQ5 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH471174 EMBL:AL161454
EMBL:BC035183 EMBL:BC140702 EMBL:AL389953 IPI:IPI00641648
IPI:IPI00873984 RefSeq:NP_001010895.1 UniGene:Hs.432364
UniGene:Hs.732570 ProteinModelPortal:Q5T890 SMR:Q5T890
IntAct:Q5T890 PhosphoSite:Q5T890 DMDM:74756405 PRIDE:Q5T890
DNASU:375748 Ensembl:ENST00000288985 Ensembl:ENST00000426805
Ensembl:ENST00000437817 GeneID:375748 KEGG:hsa:375748
UCSC:uc004avt.4 UCSC:uc010mrz.3 CTD:375748 HGNC:HGNC:26922
neXtProt:NX_Q5T890 PharmGKB:PA134961240 HOGENOM:HOG000074171
HOVERGEN:HBG108393 InParanoid:Q5T890 OMA:HGNRKDN OrthoDB:EOG41G33K
ChiTaRS:ERCC6L2 GenomeRNAi:375748 NextBio:100596
ArrayExpress:Q5T890 Bgee:Q5T890 CleanEx:HS_C9orf102
Genevestigator:Q5T890 Uniprot:Q5T890
Length = 712
Score = 91 (37.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 34/148 (22%), Positives = 65/148 (43%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L + W + +DEA +++ A TE+ L R +TGT +Q + +L+ ++ +
Sbjct: 272 LNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVP 331
Query: 654 SPFSISRWWIEVIRDPYENGD----------VG--AMEFTHKFFKEIMCRSSKVHVSDEL 701
++ + DP E+G G AM+ K R +K + D
Sbjct: 332 GLLGSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKD-- 389
Query: 702 QLPPQEECVSWLTFSPIEEHFYQSQHET 729
QLP +E+ + + + + ++ YQ+ ET
Sbjct: 390 QLPKKEDRMVYCSLTDFQKAVYQTVLET 417
Score = 78 (32.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 356 YVFGG--ILADEMGLGKTVELLACIFA--HRKPASDD 388
Y+ GG IL D+MGLGKTV++++ + A H+K +D
Sbjct: 149 YIHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTRED 185
Score = 56 (24.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 19/71 (26%), Positives = 30/71 (42%)
Query: 494 SPVATGATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGA 553
S A LIV P +L W E+ G + + G R D ++ + +
Sbjct: 204 SSTAKKMFLIVAPLSVLYNWKDELDTW---GYFRVTVLHGNRK----DNELIRVKQRK-C 255
Query: 554 DIVLTTYDVLK 564
+I LTTY+ L+
Sbjct: 256 EIALTTYETLR 266
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 125 (49.1 bits), Expect = 0.00017, Sum P(5) = 0.00017
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L I W + +DEA +++ + + +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 881 LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 940
Query: 654 SPFSISRWWIEVIRDPYENGDVGAMEFTHKF---FKEIMCRSSKVHVSDELQLPPQEECV 710
+ FS E ++D GD+ E K K +M R K V E L P++E +
Sbjct: 941 TQFSSEA---EFLKD---FGDLKTEEQVQKLQAILKPMMLRRLKEDV--EKNLAPKQETI 992
Query: 711 SWLTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 993 IEVELTNIQKKYYRA 1007
Score = 59 (25.8 bits), Expect = 0.00017, Sum P(5) = 0.00017
Identities = 11/13 (84%), Positives = 13/13 (100%)
Query: 361 ILADEMGLGKTVE 373
ILADEMGLGKT++
Sbjct: 777 ILADEMGLGKTIQ 789
Score = 52 (23.4 bits), Expect = 0.00017, Sum P(5) = 0.00017
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 765 THAEAAKLLNSLLKLRQACCHP 786
+ + LLN++++LR+ C HP
Sbjct: 1021 SQSNTPNLLNTMMELRKCCNHP 1042
Score = 47 (21.6 bits), Expect = 0.00017, Sum P(5) = 0.00017
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGA 534
G L++ P + W+ E T+ + T +Y G+
Sbjct: 804 GPFLVIAPLSTITNWEREFGSWTQ---MNTIVYHGS 836
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(5) = 0.00017
Identities = 11/52 (21%), Positives = 22/52 (42%)
Query: 891 LSQNEQHFPGCSEKAFKIHSIETCDENARKCQRVSREENSDFTDAEDPSGHL 942
+ + +HF + + +E+ D++ K +R R+ TD HL
Sbjct: 1346 IRKQTRHFTNKDDDMVEFSDLESDDDDRPKARRQDRKHGYGRTDCFRVEKHL 1397
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 106 (42.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L + W I +DEA +++ ++ +++ Y+++R ITGTP+Q L +L+ LL FL
Sbjct: 256 LQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLP 315
Query: 654 SPFSIS 659
F S
Sbjct: 316 DVFGDS 321
Score = 66 (28.3 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 360 GILADEMGLGKTVELLACIFAHRKPASDDSIFIDTAVQVTDDQKVNLRR 408
GILADEMGLGKT++ ++ + R D FI + T D N RR
Sbjct: 160 GILADEMGLGKTLQTISFLGYLRYIKHIDGPFIVIVPKSTLD---NWRR 205
Score = 58 (25.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 757 DALYNPIITHAEA-AKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTK 815
DA+ N ++ E +LLN +++LR+ C HP + G P + DE L+ GK
Sbjct: 401 DAV-NGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEP--GPPYTTDEHLVYNSGKMI 456
Query: 816 IEGEEALRKLVMALNGLAGIALIEKNLSQAVSLYKE 851
I L K++ LI +S+ + + ++
Sbjct: 457 I-----LDKMLKKFKAEGSRVLIFSQMSRVLDILED 487
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 106 (42.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKS 653
L + W I +DEA +++ ++ +++ Y+++R ITGTP+Q L +L+ LL FL
Sbjct: 256 LQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLP 315
Query: 654 SPFSIS 659
F S
Sbjct: 316 DVFGDS 321
Score = 66 (28.3 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 360 GILADEMGLGKTVELLACIFAHRKPASDDSIFIDTAVQVTDDQKVNLRR 408
GILADEMGLGKT++ ++ + R D FI + T D N RR
Sbjct: 160 GILADEMGLGKTLQTISFLGYLRYIKHIDGPFIVIVPKSTLD---NWRR 205
Score = 58 (25.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 757 DALYNPIITHAEA-AKLLNSLLKLRQACCHPQVGSSGLRSLQQSPLSMDEILMVLIGKTK 815
DA+ N ++ E +LLN +++LR+ C HP + G P + DE L+ GK
Sbjct: 401 DAV-NGVVGKREGKTRLLNIVMQLRKCCNHPYL-FDGAEP--GPPYTTDEHLVYNSGKMI 456
Query: 816 IEGEEALRKLVMALNGLAGIALIEKNLSQAVSLYKE 851
I L K++ LI +S+ + + ++
Sbjct: 457 I-----LDKMLKKFKAEGSRVLIFSQMSRVLDILED 487
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 861 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 920
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 921 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--EA 978
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S ++ Y+
Sbjct: 979 QLPEKVEYVIKCDMSALQRVLYR 1001
Score = 73 (30.8 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 767 GILADEMGLGKTIQTIALI 785
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 1027 LMNTIMQLRKICNHP 1041
Score = 47 (21.6 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G+ + + + + +++LT
Sbjct: 796 GPFLIIVPLSTLSNWAYEFDKWA-PSVVKVS-YKGSPAARRAFVPQLRSGKF---NVLLT 850
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 851 TYEYIIKD 858
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 861 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 920
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 921 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--EA 978
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S ++ Y+
Sbjct: 979 QLPEKVEYVIKCDMSALQRVLYR 1001
Score = 73 (30.8 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 767 GILADEMGLGKTIQTIALI 785
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 1027 LMNTIMQLRKICNHP 1041
Score = 47 (21.6 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G+ + + + + +++LT
Sbjct: 796 GPFLIIVPLSTLSNWAYEFDKWA-PSVVKVS-YKGSPAARRAFVPQLRSGKF---NVLLT 850
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 851 TYEYIIKD 858
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 120 (47.3 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 600 WR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
WR + LDEAQ +++ + + L ++ R +TGTP+Q L +L+ L+ FL F
Sbjct: 740 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQS 799
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECV 710
R + E +P G+ E+ HK + + R KV V E Q+P + E V
Sbjct: 800 HREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDV--EKQMPKKYEHV 856
Score = 72 (30.4 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ ++ + AH
Sbjct: 639 GILADEMGLGKTIQTIS-LLAH 659
Score = 54 (24.1 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGAR 535
G LI+ P ++ W+ E+ R P S K Y GA+
Sbjct: 668 GPHLIIVPTSVMLNWEMELKRWC-P-SFKILTYYGAQ 702
Score = 46 (21.3 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 772 LLNSLLKLRQACCHPQV 788
++N L++LR+ C HP +
Sbjct: 890 VINILMQLRKVCNHPNL 906
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 120 (47.3 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 600 WR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
WR + LDEAQ +++ + + L ++ R +TGTP+Q L +L+ L+ FL F
Sbjct: 747 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQS 806
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECV 710
R + E +P G+ E+ HK + + R KV V E Q+P + E V
Sbjct: 807 HREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDV--EKQMPKKYEHV 863
Score = 72 (30.4 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ ++ + AH
Sbjct: 646 GILADEMGLGKTIQTIS-LLAH 666
Score = 54 (24.1 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGAR 535
G LI+ P ++ W+ E+ R P S K Y GA+
Sbjct: 675 GPHLIIVPTSVMLNWEMELKRWC-P-SFKILTYYGAQ 709
Score = 46 (21.3 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 772 LLNSLLKLRQACCHPQV 788
++N L++LR+ C HP +
Sbjct: 897 VINILMQLRKVCNHPNL 913
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 112 (44.5 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 869 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 928
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 929 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--EA 986
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S ++ Y+
Sbjct: 987 QLPEKVEYVIKCDMSALQRVLYR 1009
Score = 73 (30.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 775 GILADEMGLGKTIQTIALI 793
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 1035 LMNTIMQLRKICNHP 1049
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G+ + + + + +++LT
Sbjct: 804 GPFLIIVPLSTLSNWAYEFDKWA-PSVVKVS-YKGSPAARRAFVPQLRSGKF---NVLLT 858
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 859 TYEYIIKD 866
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 112 (44.5 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 869 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 928
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 929 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--EA 986
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S ++ Y+
Sbjct: 987 QLPEKVEYVIKCDMSALQRVLYR 1009
Score = 73 (30.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 775 GILADEMGLGKTIQTIALI 793
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 1035 LMNTIMQLRKICNHP 1049
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G+ + + + + +++LT
Sbjct: 804 GPFLIIVPLSTLSNWAYEFDKWA-PSVVKVS-YKGSPAARRAFVPQLRSGKF---NVLLT 858
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 859 TYEYIIKD 866
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 120 (47.3 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 600 WR-ICLDEAQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYGLLRFLKSSPFSI 658
WR + LDEAQ +++ + + L ++ R +TGTP+Q L +L+ L+ FL F
Sbjct: 748 WRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQS 807
Query: 659 SRWWIEVIRDPYENGDVGAMEFT-------HKFFKEIMCRSSKVHVSDELQLPPQEECV 710
R + E +P G+ E+ HK + + R KV V E Q+P + E V
Sbjct: 808 HREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDV--EKQMPKKYEHV 864
Score = 72 (30.4 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 360 GILADEMGLGKTVELLACIFAH 381
GILADEMGLGKT++ ++ + AH
Sbjct: 647 GILADEMGLGKTIQTIS-LLAH 667
Score = 54 (24.1 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGAR 535
G LI+ P ++ W+ E+ R P S K Y GA+
Sbjct: 676 GPHLIIVPTSVMLNWEMELKRWC-P-SFKILTYYGAQ 710
Score = 46 (21.3 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 772 LLNSLLKLRQACCHPQV 788
++N L++LR+ C HP +
Sbjct: 898 VINILMQLRKVCNHPNL 914
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 112 (44.5 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 869 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 928
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 929 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--EA 986
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S ++ Y+
Sbjct: 987 QLPEKVEYVIKCDMSALQRVLYR 1009
Score = 73 (30.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 775 GILADEMGLGKTIQTIALI 793
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 1035 LMNTIMQLRKICNHP 1049
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G+ + + + + +++LT
Sbjct: 804 GPFLIIVPLSTLSNWAYEFDKWA-PSVVKVS-YKGSPAARRAFVPQLRSGKF---NVLLT 858
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 859 TYEYIIKD 866
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 112 (44.5 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 869 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 928
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 929 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--EA 986
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S ++ Y+
Sbjct: 987 QLPEKVEYVIKCDMSALQRVLYR 1009
Score = 73 (30.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 775 GILADEMGLGKTIQTIALI 793
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 1035 LMNTIMQLRKICNHP 1049
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G+ + + + + +++LT
Sbjct: 804 GPFLIIVPLSTLSNWAYEFDKWA-PSVVKVS-YKGSPAARRAFVPQLRSGKF---NVLLT 858
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 859 TYEYIIKD 866
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 112 (44.5 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 593 LLTRIFWWRICLDEAQMVESNAAAATEMALRLY-AKHRWCITGTPIQRKLDDLYGLLRFL 651
+L +I W + +DE ++++ T++ Y A R +TGTP+Q KL +L+ LL FL
Sbjct: 869 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 928
Query: 652 KSSPF----SISRWWIEVIRDPYENGDVGAMEFT------HKFFKEIMCRSSKVHVSDEL 701
+ F + +W+ E D+ E HK + + R K V E
Sbjct: 929 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEV--EA 986
Query: 702 QLPPQEECVSWLTFSPIEEHFYQ 724
QLP + E V S ++ Y+
Sbjct: 987 QLPEKVEYVIKCDMSALQRVLYR 1009
Score = 73 (30.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 360 GILADEMGLGKTVELLACI 378
GILADEMGLGKT++ +A I
Sbjct: 775 GILADEMGLGKTIQTIALI 793
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 1035 LMNTIMQLRKICNHP 1049
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSSLSDTSIMDISELVGADIVLT 558
G LI+ P L+ W E + P +K Y+G+ + + + + +++LT
Sbjct: 804 GPFLIIVPLSTLSNWAYEFDKWA-PSVVKVS-YKGSPAARRAFVPQLRSGKF---NVLLT 858
Query: 559 TYDVLKED 566
TY+ + +D
Sbjct: 859 TYEYIIKD 866
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 128 (50.1 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 36/133 (27%), Positives = 67/133 (50%)
Query: 594 LTRIFWWRICLDEAQMVESNAAAATEMALRLYA-KHRWCITGTPIQRKLDDLYGLLRFLK 652
L +I W + +DEA +++ E L+L A +H+ +TGTP+Q +++L+ LL FL+
Sbjct: 384 LKKIQWRCVVIDEAHRLKNRNCKLLE-GLKLMALEHKVLLTGTPLQNSVEELFSLLNFLE 442
Query: 653 SSPFSISRWWIEVIRDPYENGDVGAMEFTHKFFKEIMCRSSKVHVSDELQLPPQEECVSW 712
F ++E D V ++ K +M R K V E L P++E +
Sbjct: 443 PQQFPSETAFLEEFGDLKTEEQVKKLQ---SILKPMMLRRLKDDV--EKNLAPKQETIIE 497
Query: 713 LTFSPIEEHFYQS 725
+ + I++ +Y++
Sbjct: 498 VELTNIQKKYYRA 510
Score = 59 (25.8 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 11/13 (84%), Positives = 13/13 (100%)
Query: 361 ILADEMGLGKTVE 373
ILADEMGLGKT++
Sbjct: 280 ILADEMGLGKTIQ 292
Score = 49 (22.3 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 7/15 (46%), Positives = 13/15 (86%)
Query: 772 LLNSLLKLRQACCHP 786
L+N++++LR+ C HP
Sbjct: 531 LINTMMELRKCCNHP 545
Score = 47 (21.6 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 16/77 (20%), Positives = 32/77 (41%)
Query: 499 GATLIVCPAPILAQWDAEITRHTRPGSLKTCIYEGARNSS---------LSDTSIMDISE 549
G LI+ P + W+ E T ++ +Y G++ S DT +
Sbjct: 307 GPFLIIAPLSTITNWEREFRTWTEMNAI---VYHGSQISRQMIQQYEMVYRDTQGNPLPG 363
Query: 550 LVGADIVLTTYDVLKED 566
+ +V+TT++++ D
Sbjct: 364 IFKFQVVITTFEMILAD 380
WARNING: HSPs involving 39 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1064 1001 0.00078 123 3 11 22 0.38 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 289
No. of states in DFA: 633 (67 KB)
Total size of DFA: 502 KB (2232 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 82.01u 0.09s 82.10t Elapsed: 00:00:03
Total cpu time: 82.06u 0.09s 82.15t Elapsed: 00:00:04
Start: Mon May 20 20:59:42 2013 End: Mon May 20 20:59:46 2013
WARNINGS ISSUED: 2