Your job contains 1 sequence.
>001512
MSKAEHMGVSPSQVTSSTRDHSCLKQTTPEQMCKFCAECIHSEPLESKSLLGSEAVENEP
RETSIPNSEKLQAFCGDVPDSSFTDHLAPPSEDMRKSTQTNKASCSQQNTSEQKHGTELM
HNEQSEQKHQLCYQIVFDKPQATSLVDNATLQPVSKDVSKSSQTGNRQALDFLSGNRCNE
LDVDCVHSEPLNQKHQLGSEIIQNEPAVNIARLPSDGVEENLQTISEDLTKVCPVEPSQS
PPRDANKSCQAGEISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGSQLEQTELGETSAGE
LGASLELVVKSSIEQLKQPEVPITIPSTKTSATKHLQSSSDLMEKKSCLEQSETPPNYVA
NNSACLGRKGKRATKSLKNNYTVRSLIGSDRVLRSRSGERPIPPESSINLADVNSIGERK
QKKRNKIRRKKIVADEYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLSVEKLKPEKEL
QRATSEILRRKLKIRDLFQRLDSLCAGGFPKSLFDSEGQIDSEDIYCAKCGSKDLSADND
IILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITD
NWEKVFPEAAAGHNQDPNFGLASDDSDDNEYDPDGSATDEQDEGDESSSDGSSSDDSDFT
STSDEVEAPADDKTYLGLSSEDSEDDEYNPDAPELDDKVTQESSSSGSDFTSDSEDLAAV
LEDNRSSGNDEGAASPLGHSNGQRYKDGGNNESLNNELLSIIKPGQDGAAPVYGKRSSER
LDYKKLYDETYGNVPYDSSDDESWSDDGGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKA
AKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQK
LYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCT
PQSNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKNNTQECNSIKPTSQTSRKRDRD
GKSGDQASDPSSKMEVIQGLSANSPKVEVQANGRTRRRRNSAV
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001512
(1063 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090694 - symbol:HAT3.1 species:3702 "Arabidop... 776 3.1e-108 3
TAIR|locus:2005538 - symbol:PRHA "pathogenesis related ho... 487 1.6e-53 4
RGD|1311245 - symbol:Rsf1 "remodeling and spacing factor ... 139 1.0e-11 3
ZFIN|ZDB-GENE-091204-206 - symbol:si:dkey-21n12.3 "si:dke... 125 2.1e-07 3
MGI|MGI:2444959 - symbol:Mll3 "myeloid/lymphoid or mixed-... 117 1.0e-06 3
UNIPROTKB|F1P8R2 - symbol:RSF1 "Uncharacterized protein" ... 144 1.6e-06 3
UNIPROTKB|H0YDG9 - symbol:RSF1 "Remodeling and spacing fa... 133 1.8e-06 2
UNIPROTKB|J9P712 - symbol:PHRF1 "Uncharacterized protein"... 140 1.9e-06 2
UNIPROTKB|F1PXY6 - symbol:PHRF1 "Uncharacterized protein"... 140 1.9e-06 2
UNIPROTKB|I3LU11 - symbol:PHRF1 "Uncharacterized protein"... 143 2.0e-06 3
UNIPROTKB|F1STY8 - symbol:RSF1 "Uncharacterized protein" ... 142 2.1e-06 3
UNIPROTKB|I3LTW3 - symbol:I3LTW3 "Uncharacterized protein... 121 2.7e-06 1
UNIPROTKB|H0YLB0 - symbol:PBX1 "Pre-B-cell leukemia trans... 139 4.4e-06 1
UNIPROTKB|O15499 - symbol:GSC2 "Homeobox protein goosecoi... 132 4.7e-06 1
FB|FBgn0036203 - symbol:Muc68D "Mucin 68D" species:7227 "... 111 4.8e-06 2
UNIPROTKB|F1S218 - symbol:PBX1 "Uncharacterized protein" ... 139 4.9e-06 1
RGD|1308213 - symbol:Pbx1 "pre-B-cell leukemia homeobox 1... 139 4.9e-06 1
UNIPROTKB|E1BSR7 - symbol:PBX1 "Uncharacterized protein" ... 139 5.5e-06 1
UNIPROTKB|J9P997 - symbol:PBX1 "Uncharacterized protein" ... 139 5.6e-06 1
UNIPROTKB|F1NQJ5 - symbol:PBX1 "Uncharacterized protein" ... 139 5.7e-06 1
UNIPROTKB|H0YKN0 - symbol:PBX1 "Pre-B-cell leukemia trans... 139 5.8e-06 1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"... 117 7.2e-06 1
UNIPROTKB|F1MJ02 - symbol:PBX1 "Uncharacterized protein" ... 139 7.8e-06 1
UNIPROTKB|F1PDM8 - symbol:PBX1 "Uncharacterized protein" ... 139 7.8e-06 1
UNIPROTKB|P40424 - symbol:PBX1 "Pre-B-cell leukemia trans... 139 7.8e-06 1
MGI|MGI:97495 - symbol:Pbx1 "pre B cell leukemia homeobox... 139 7.8e-06 1
UNIPROTKB|B7Z774 - symbol:PBX1 "Pre-B-cell leukemia trans... 135 1.0e-05 1
UNIPROTKB|Q96T23 - symbol:RSF1 "Remodeling and spacing fa... 137 1.1e-05 3
UNIPROTKB|E9PJ24 - symbol:PHRF1 "PHD and RING finger doma... 135 1.6e-05 2
UNIPROTKB|F8WEF5 - symbol:PHRF1 "PHD and RING finger doma... 135 1.6e-05 2
ZFIN|ZDB-GENE-010328-16 - symbol:baz1b "bromodomain adjac... 115 1.7e-05 4
ZFIN|ZDB-GENE-040426-2039 - symbol:uhrf1 "ubiquitin-like,... 137 1.9e-05 2
UNIPROTKB|J9NTV3 - symbol:GSC2 "Uncharacterized protein" ... 115 2.4e-05 1
UNIPROTKB|F1PUR9 - symbol:DUXA "Uncharacterized protein" ... 117 2.9e-05 1
UNIPROTKB|G3MZU0 - symbol:GSC2 "Uncharacterized protein" ... 119 3.1e-05 1
UNIPROTKB|O13004 - symbol:GSC2 "Goosecoid 2" species:9031... 111 3.1e-05 1
ZFIN|ZDB-GENE-000823-7 - symbol:hoxb6b "homeo box B6b" sp... 127 3.1e-05 1
UNIPROTKB|O75360 - symbol:PROP1 "Homeobox protein prophet... 127 3.3e-05 1
RGD|708360 - symbol:Phrf1 "PHD and ring finger domains 1"... 139 3.5e-05 3
UNIPROTKB|Q63625 - symbol:Phrf1 "PHD and RING finger doma... 139 3.5e-05 3
ZFIN|ZDB-GENE-030131-624 - symbol:phrf1 "PHD and ring fin... 131 3.6e-05 3
UNIPROTKB|A7E320 - symbol:UHRF1 "E3 ubiquitin-protein lig... 136 4.1e-05 1
UNIPROTKB|H0YCN2 - symbol:RSF1 "Remodeling and spacing fa... 137 4.1e-05 2
RGD|1309990 - symbol:Uhrf2 "ubiquitin-like with PHD and r... 135 4.2e-05 2
RGD|1305333 - symbol:Gsc2 "goosecoid homeobox 2" species:... 125 4.4e-05 1
UNIPROTKB|A6NLW8 - symbol:DUXA "Double homeobox protein A... 123 6.1e-05 1
UNIPROTKB|F1MLK1 - symbol:RSF1 "Uncharacterized protein" ... 145 6.5e-05 3
FB|FBgn0001170 - symbol:H2.0 "Homeodomain protein 2.0" sp... 131 7.1e-05 2
RGD|1305100 - symbol:Pbx4 "pre-B-cell leukemia homeobox 4... 129 7.7e-05 1
UNIPROTKB|F1RK76 - symbol:GSC2 "Uncharacterized protein" ... 123 8.2e-05 1
UNIPROTKB|F6UA42 - symbol:uhrf1 "E3 ubiquitin-protein lig... 129 8.6e-05 3
UNIPROTKB|F1NQJ4 - symbol:PBX1 "Uncharacterized protein" ... 126 8.9e-05 1
MGI|MGI:1923718 - symbol:Uhrf2 "ubiquitin-like, containin... 138 0.00010 2
TAIR|locus:2089606 - symbol:AT3G14740 species:3702 "Arabi... 127 0.00010 1
UNIPROTKB|D6RBG8 - symbol:PITX2 "Pituitary homeobox 2" sp... 106 0.00011 1
FB|FBgn0033015 - symbol:d4 "d4" species:7227 "Drosophila ... 129 0.00012 1
UNIPROTKB|Q8MJI9 - symbol:PROP1 "Homeobox protein prophet... 122 0.00013 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 105 0.00014 1
UNIPROTKB|F1RSD4 - symbol:PRRX1 "Uncharacterized protein"... 105 0.00014 1
UNIPROTKB|F1P4F7 - symbol:UHRF1 "Uncharacterized protein"... 132 0.00014 2
ZFIN|ZDB-GENE-990714-27 - symbol:pitx2 "paired-like homeo... 125 0.00015 1
UNIPROTKB|Q9P1Y6 - symbol:PHRF1 "PHD and RING finger doma... 135 0.00017 3
UNIPROTKB|G3V309 - symbol:DUX4L2 "Double homeobox protein... 113 0.00017 1
MGI|MGI:2141847 - symbol:Phrf1 "PHD and ring finger domai... 137 0.00018 2
UNIPROTKB|F1S6Q4 - symbol:PBX4 "Uncharacterized protein" ... 124 0.00018 1
UNIPROTKB|I3LCL1 - symbol:PBX4 "Uncharacterized protein" ... 124 0.00018 1
UNIPROTKB|Q96PU4 - symbol:UHRF2 "E3 ubiquitin-protein lig... 130 0.00018 1
FB|FBgn0000577 - symbol:en "engrailed" species:7227 "Dros... 95 0.00019 2
WB|WBGene00006766 - symbol:unc-30 species:6239 "Caenorhab... 124 0.00020 1
FB|FBgn0052580 - symbol:Muc14A "Mucin 14A" species:7227 "... 124 0.00021 2
UNIPROTKB|I3LNW7 - symbol:PBX4 "Uncharacterized protein" ... 124 0.00022 1
UNIPROTKB|B6CHA3 - symbol:uhrf1 "E3 ubiquitin-protein lig... 130 0.00026 3
UNIPROTKB|F1NB58 - symbol:F1NB58 "Uncharacterized protein... 117 0.00027 1
ZFIN|ZDB-GENE-980526-40 - symbol:eng2b "engrailed 2b" spe... 119 0.00028 2
ZFIN|ZDB-GENE-000201-18 - symbol:pbx4 "pre-B-cell leukemi... 123 0.00029 1
UNIPROTKB|F1PJN4 - symbol:UHRF1 "Uncharacterized protein"... 128 0.00030 1
MGI|MGI:1351322 - symbol:Mixl1 "Mix1 homeobox-like 1 (Xen... 119 0.00030 1
UNIPROTKB|F1NQK9 - symbol:SIX4 "Uncharacterized protein" ... 121 0.00032 1
MGI|MGI:109340 - symbol:Pitx2 "paired-like homeodomain tr... 122 0.00032 1
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 130 0.00032 1
WB|WBGene00000451 - symbol:ceh-30 species:6239 "Caenorhab... 119 0.00033 1
UNIPROTKB|Q22909 - symbol:ceh-30 "Homeobox protein ceh-30... 119 0.00033 1
UNIPROTKB|A8DZJ1 - symbol:baz1b "Tyrosine-protein kinase ... 123 0.00035 2
UNIPROTKB|F1P2X4 - symbol:F1P2X4 "Uncharacterized protein... 117 0.00040 1
UNIPROTKB|F1LNM5 - symbol:Pbx2 "Protein Pbx2" species:101... 122 0.00040 1
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 130 0.00040 1
UNIPROTKB|F1PF80 - symbol:PBX4 "Uncharacterized protein" ... 122 0.00043 1
ZFIN|ZDB-GENE-041010-202 - symbol:baz2a "bromodomain adja... 119 0.00046 2
ZFIN|ZDB-GENE-031218-1 - symbol:pbx3a "pre-B-cell leukemi... 121 0.00047 1
UNIPROTKB|B3DM47 - symbol:pbx2 "Pre-B-cell leukemia trans... 122 0.00054 1
UNIPROTKB|F1PLX7 - symbol:PBX2 "Uncharacterized protein" ... 122 0.00055 1
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 128 0.00055 2
UNIPROTKB|F1MQ55 - symbol:Bt.5205 "Uncharacterized protei... 122 0.00056 1
UNIPROTKB|P40425 - symbol:PBX2 "Pre-B-cell leukemia trans... 122 0.00056 1
UNIPROTKB|A5A8X7 - symbol:PBX2 "Uncharacterized protein" ... 122 0.00056 1
MGI|MGI:1341793 - symbol:Pbx2 "pre B cell leukemia homeob... 122 0.00056 1
RGD|1303084 - symbol:Pbx2 "pre-B-cell leukemia homeobox 2... 122 0.00056 1
UNIPROTKB|Q9BYU1 - symbol:PBX4 "Pre-B-cell leukemia trans... 121 0.00056 1
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 129 0.00057 2
UNIPROTKB|F8VSK3 - symbol:PBX2 "Pre-B-cell leukemia trans... 122 0.00057 1
WARNING: Descriptions of 20 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2090694 [details] [associations]
symbol:HAT3.1 species:3702 "Arabidopsis thaliana"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS;RCA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0051276 "chromosome
organization" evidence=RCA] [GO:0003677 "DNA binding" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001965 InterPro:IPR009057
InterPro:IPR019787 Pfam:PF00046 Pfam:PF00628 PROSITE:PS00027
PROSITE:PS50016 PROSITE:PS50071 SMART:SM00249 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AB025624 EMBL:X69512
EMBL:AK117105 EMBL:BT005965 IPI:IPI00537420 PIR:S31437
RefSeq:NP_188582.1 UniGene:At.19694 ProteinModelPortal:Q04996
SMR:Q04996 IntAct:Q04996 STRING:Q04996 PaxDb:Q04996 PRIDE:Q04996
EnsemblPlants:AT3G19510.1 GeneID:821485 KEGG:ath:AT3G19510
TAIR:At3g19510 eggNOG:NOG79337 HOGENOM:HOG000112850
InParanoid:Q04996 OMA:KEGECET PhylomeDB:Q04996
ProtClustDB:CLSN2915378 Genevestigator:Q04996 Uniprot:Q04996
Length = 723
Score = 776 (278.2 bits), Expect = 3.1e-108, Sum P(3) = 3.1e-108
Identities = 163/297 (54%), Positives = 197/297 (66%)
Query: 317 KQPEVPITIPSTKTSATKHLQSSSDLMEKKSCLEQSETPPNYVANNSAC-LGRKGKRATK 375
+Q P T+ + TK S +L+ C Q E A+ S+ LG G+R
Sbjct: 71 EQKPTPQTVKKDSNTNTKFSGSHRELVIGLPCRGQFEIHNRSRASTSSKRLGGGGER--- 127
Query: 376 SLKNNYTVRSLIGSDRVLRSRSGERPIPPESSINLADVNSIGEXXXXXXXXXXXXXIVAD 435
N S R RS+ P SS+ +A+ +G D
Sbjct: 128 ----NVLFAS---HKRAQRSKEDAGP----SSV-VANSTPVGRPKKKNKTMNKGQVREDD 175
Query: 436 EYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLSVEKLKPEKELQRATSEILRRKLKIR 495
EY+RI+ LRY LNRINYEQ+LIDAYS EGWKG S+EK++PEKEL+RAT EILRRKLKIR
Sbjct: 176 EYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSLEKIRPEKELERATKEILRRKLKIR 235
Query: 496 DLFQRLDSLCA-GGFPKSLFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQ 554
DLFQ LD+LCA G P+SLFD++G+I SEDI+CAKCGSKDLS DNDIILCDG CDRGFHQ
Sbjct: 236 DLFQHLDTLCAEGSLPESLFDTDGEISSEDIFCAKCGSKDLSVDNDIILCDGFCDRGFHQ 295
Query: 555 YCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEAAA 611
YCLEPPL KEDIPPDDEGWLCPGCDCK D +DL+N+ GT+ ++D+WEK+FPEAAA
Sbjct: 296 YCLEPPLRKEDIPPDDEGWLCPGCDCKDDSLDLLNDSLGTKFSVSDSWEKIFPEAAA 352
Score = 270 (100.1 bits), Expect = 3.1e-108, Sum P(3) = 3.1e-108
Identities = 82/227 (36%), Positives = 108/227 (47%)
Query: 767 DGAAPVYGKRSSERLDYKKLYDETYGNVPYXXXXXXXXXXXGGPRKRTKSTKEGSSASPD 826
DG A V +R+ ERLDYKKLYDE Y NVP K + KE S + +
Sbjct: 509 DGPAGVSRRRNVERLDYKKLYDEEYDNVPTSSSDDDDWD------KTARMGKEDSESEDE 562
Query: 827 GKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRH 886
G T + K+ N ++T K+ R K D + EG G G
Sbjct: 563 GDTVPL---------KQSSNAEDHTSKKLIR-KSKRADKKDTLEMPQEGPGENGGSGEIE 612
Query: 887 RTSYR--KLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH- 943
++S K + TQ+LY SF+ENQYP++ TKESLAKEL +T QV WF++ RWS N
Sbjct: 613 KSSSSACKQTDPKTQRLYISFQENQYPDKATKESLAKELQMTVKQVNNWFKHRRWSINSK 672
Query: 944 P--SSKNA-KLANSEKGTCTPQ---SNKNTVGRVSNCNGAENVQSSK 984
P S +N KL ++G C S+K T+ S N S K
Sbjct: 673 PLVSEENVEKLKTGKEGECETSVAGSSKQTMETESVAEKPTNTGSRK 719
Score = 144 (55.7 bits), Expect = 2.6e-95, Sum P(3) = 2.6e-95
Identities = 55/192 (28%), Positives = 73/192 (38%)
Query: 673 KTYLGLSSEDSEDDEYNPDAPELDDKVTQEXXXXXXXXXXXXXXLAAVLEDNRSSGNDEG 732
K + L S+DSEDD+Y+PDAP DD +E + ++ D
Sbjct: 427 KDVMALPSDDSEDDDYDPDAPTCDDD--KESSNSDCTSDTEDLETSFKGDETNQQAEDTP 484
Query: 733 AASPLGHSNGQRYKDGGXXXXXXXXXXXIIKPGQDGAAPVYGKRSSERLDYKKLYDETYG 792
P G Q D DG A V +R+ ERLDYKKLYDE Y
Sbjct: 485 LEDP-GRQTSQLQGDAILESDVGL---------DDGPAGVSRRRNVERLDYKKLYDEEYD 534
Query: 793 NVPYXXXXXXXXXXXGGPRKR-TKSTKEGS------SASPDGKTPVIRRRKSTKA-AKEK 844
NVP K ++S EG S++ + T RKS +A K+
Sbjct: 535 NVPTSSSDDDDWDKTARMGKEDSESEDEGDTVPLKQSSNAEDHTSKKLIRKSKRADKKDT 594
Query: 845 LNETENTPKRRG 856
L + P G
Sbjct: 595 LEMPQEGPGENG 606
Score = 61 (26.5 bits), Expect = 2.6e-95, Sum P(3) = 2.6e-95
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 978 ENVQSSKTGVDDTGCMT---GDVKNNTQECNSI--KPTSQTSRKRDR 1019
ENV+ KTG + C T G K T E S+ KPT+ SRKR R
Sbjct: 678 ENVEKLKTGKEGE-CETSVAGSSKQ-TMETESVAEKPTNTGSRKRRR 722
Score = 58 (25.5 bits), Expect = 3.1e-108, Sum P(3) = 3.1e-108
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 678 LSSEDSEDDEYNPDAPELDDKVTQE 702
L S+DS+D+EY+PD L+D E
Sbjct: 365 LPSDDSDDEEYDPDC--LNDNENDE 387
Score = 40 (19.1 bits), Expect = 4.6e-84, Sum P(3) = 4.6e-84
Identities = 12/75 (16%), Positives = 35/75 (46%)
Query: 963 SNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDV-KNNTQECNSIKPTSQTSRKRDRDG 1021
++K + + + + ++ + G + G +G++ K+++ C P +Q ++
Sbjct: 578 TSKKLIRKSKRADKKDTLEMPQEGPGENGG-SGEIEKSSSSACKQTDPKTQRLYISFQEN 636
Query: 1022 KSGDQASDPSSKMEV 1036
+ D+A+ S E+
Sbjct: 637 QYPDKATKESLAKEL 651
>TAIR|locus:2005538 [details] [associations]
symbol:PRHA "pathogenesis related homeodomain protein A"
species:3702 "Arabidopsis thaliana" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR001965
InterPro:IPR009057 InterPro:IPR019787 Pfam:PF00046 Pfam:PF00628
PROSITE:PS50016 PROSITE:PS50071 SMART:SM00249 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006952 GO:GO:0009733 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AL050352 EMBL:AL161575 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:L21991 EMBL:U48864
IPI:IPI00540289 PIR:T08555 RefSeq:NP_194723.1 UniGene:At.19983
ProteinModelPortal:P48785 SMR:P48785 IntAct:P48785 STRING:P48785
PaxDb:P48785 PRIDE:P48785 EnsemblPlants:AT4G29940.1 GeneID:829117
KEGG:ath:AT4G29940 TAIR:At4g29940 eggNOG:NOG311547
HOGENOM:HOG000115692 InParanoid:P48785 OMA:MTEESHE PhylomeDB:P48785
ProtClustDB:CLSN2716723 Genevestigator:P48785 GermOnline:AT4G29940
Uniprot:P48785
Length = 796
Score = 487 (176.5 bits), Expect = 1.6e-53, Sum P(4) = 1.6e-53
Identities = 87/181 (48%), Positives = 122/181 (67%)
Query: 432 IVADEYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLSVEKLKPEKELQRATSEILRRK 491
+ D+ R++ RYLL ++ +QNLIDAY++EGWKG S EK++P+KEL+RA EIL K
Sbjct: 97 VEVDDSLRLQRRTRYLLIKMKMQQNLIDAYATEGWKGQSREKIRPDKELERARKEILNCK 156
Query: 492 LKIRDLFQRLDSLCA-GGFPKSLFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDR 550
L +RD ++LD L + G + + S+G I + I+CA+C S++ DNDIILCDG C+R
Sbjct: 157 LGLRDAIRQLDLLSSVGSMEEKVIASDGSIHHDHIFCAECNSREAFPDNDIILCDGTCNR 216
Query: 551 GFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEAA 610
FHQ CL+PPL E IPP D+GW C CDCK++ ID +N GT + NW+ +F E A
Sbjct: 217 AFHQKCLDPPLETESIPPGDQGWFCKFCDCKIEIIDTMNAQIGTHFPVDSNWQDIFNEEA 276
Query: 611 A 611
+
Sbjct: 277 S 277
Score = 118 (46.6 bits), Expect = 1.6e-53, Sum P(4) = 1.6e-53
Identities = 40/154 (25%), Positives = 67/154 (43%)
Query: 881 SRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRW- 939
++G R R +R L +KL F E + P++ ++ LAKEL L +V KWF+NTR+
Sbjct: 450 NKGGRRRM-FR-LPRNAVEKLRQVFAETELPSKAVRDRLAKELSLDPEKVNKWFKNTRYM 507
Query: 940 SFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKN 999
+ + +++ K K S V + N VQ + +DDT D N
Sbjct: 508 ALRNRKTESVKQPGDSKTVSGGDSGPEAV--MENNTETNEVQDT---LDDTVPPGFDATN 562
Query: 1000 NTQECNSIKPTSQTSRKRDRDGKSGDQASDPSSK 1033
N + P + + ++ S +D S +
Sbjct: 563 Q----NILSPCNNNQEEFQQENVSFPSPTDESQQ 592
Score = 52 (23.4 bits), Expect = 1.6e-53, Sum P(4) = 1.6e-53
Identities = 15/53 (28%), Positives = 20/53 (37%)
Query: 772 VYGKRSSERLDYKKLYDETYGNVPYXXXXXXXXXXXGGPRKRTKSTKEGSSAS 824
V G R +DY +LY E +G GP R K +E + S
Sbjct: 368 VCGPRQRRTVDYTQLYYEMFGK-DAVLQEQGSEDEDWGPNDRRKRKRESDAGS 419
Score = 50 (22.7 bits), Expect = 1.6e-53, Sum P(4) = 1.6e-53
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 680 SEDSEDDEYNPDAPE 694
S+DS+DD+Y+P+ E
Sbjct: 294 SDDSKDDDYDPEMRE 308
Score = 40 (19.1 bits), Expect = 9.6e-43, Sum P(2) = 9.6e-43
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 666 VEAPADDKTYLGLSSEDSEDDEYNPDAPELDD 697
V+ P D KT G S E N + E+ D
Sbjct: 517 VKQPGDSKTVSGGDSGPEAVMENNTETNEVQD 548
>RGD|1311245 [details] [associations]
symbol:Rsf1 "remodeling and spacing factor 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006334
"nucleosome assembly" evidence=IEA;ISO] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA;ISO] [GO:0031213 "RSF complex" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0043392
"negative regulation of DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050434
"positive regulation of viral transcription" evidence=IEA;ISO]
[GO:0016887 "ATPase activity" evidence=ISO] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
RGD:1311245 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016584 GO:GO:0006334 GO:GO:0050434
GO:GO:0043392 GO:GO:0031213 OrthoDB:EOG441QBQ
GeneTree:ENSGT00530000064411 IPI:IPI00368441
Ensembl:ENSRNOT00000037050 UCSC:RGD:1311245 Uniprot:D3ZGQ8
Length = 1444
Score = 139 (54.0 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 32/76 (42%), Positives = 41/76 (53%)
Query: 517 EGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
E + +D C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP
Sbjct: 888 EAVLPDDDEPCKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCP 940
Query: 577 GCDCKVDCIDLVNELQ 592
C K+ C L +LQ
Sbjct: 941 PCQHKLLCEKLEEQLQ 956
Score = 115 (45.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 83/413 (20%), Positives = 166/413 (40%)
Query: 3 KAEHMGVSPSQVTSSTRDHSCLKQTTPEQMCKFCAECIHSEPLESKSLLGSEAVENEPRE 62
+A+ V P + S L PE+ F + S+ + KS +E ++N+ ++
Sbjct: 329 EAKECRVDPKDLKGSLER---LGSQEPER-ADFGSNIKSSQDITEKSTEETEKLKND-QQ 383
Query: 63 TSIPNSEKLQAFCGDVPDSSFTDHLA----PPSEDMRKSTQTNKASCSQQNT-SEQKH-G 116
IP +K + D DS HL P E ++ + + +C + +T S H G
Sbjct: 384 AKIP-LKKREIKLSDDFDSPVKGHLCKSATPTKECLKDDVKQEEETCKRVSTISALSHEG 442
Query: 117 TELMHNEQSEQKHQLCYQIVFDKPQATSLVDNATLQPVSKDVSKSSQTGNRQALD-FLSG 175
+LM+ E ++ K + + Q ++++ P +KD S + + L+ L+
Sbjct: 443 KQLMNGEMNDDKVTASLKTEQLETQLCHTKEDSSSIP-AKDGSAGLEGSGVECLNSVLTS 501
Query: 176 NRCNELDVDCVHSEPLN------QKH-QLGSEIIQNEPAVNIARLPSDGVEENLQTISED 228
+ +EL+ + + ++ + H Q G P +++ PS+ + +
Sbjct: 502 TKTSELEKEVSLGKAVDGSASDVESHSQKGRGEEPGPPNMDMPLEPSEKTTDLSLKSTLS 561
Query: 229 LTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGSQL 288
T+ CP + + P+ ++ AG I CL++ + I P + + L
Sbjct: 562 ATESCPTKIEEKAPKSKGENHTAG-IECLEKVEKAKKTSVDKDIQRLSP-IPEEVVRGPL 619
Query: 289 EQTELGETSAGELGASLELVVKSSIEQLKQPEVPITIPSTKTSATKHLQSSS-DLMEKKS 347
E E G E LE+ + E+ + + S +S + L+++S D++ + S
Sbjct: 620 ESEESGLCEVAETPLPLEMT--GAKEKQTSEKKGVDCLSRGSSEGQSLENASPDILRENS 677
Query: 348 CLEQSETPPNYVANNSACLGRKGKRATK-SLKNNYTVRSLIGSDRVLRSRSGE 399
E S + +N+ G + TK S++ N L+ S + E
Sbjct: 678 --ESSRVEMAKL-DNAQTSGVEDTSQTKGSVQKNKCKYKLVSEGNSTASENTE 727
Score = 51 (23.0 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 833 RRRKSTKAAKEKLN-----ETENTPK--RRGRPKLNTEDSNISPAKSHEGCSTPGSRG-- 883
RRR+S + K ++N E++ + K RRG+ +S ++S E + S
Sbjct: 1208 RRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYMSKNSEDDE 1267
Query: 884 --RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESL 919
+ + S RK G T + + +E + + +++ L
Sbjct: 1268 LTKESKRSIRKRGRS-TGEYSEADEEEEEEGKPSRKRL 1304
Score = 44 (20.5 bits), Expect = 5.3e-11, Sum P(3) = 5.3e-11
Identities = 20/84 (23%), Positives = 35/84 (41%)
Query: 834 RRKSTKAAKEKLNETENTPKRRGRP-KLNTEDSNISPAKSHEGCSTPGS---RGRRHRTS 889
++K K +K + E +T R+ + + D I A + G RG+ T
Sbjct: 1000 KKKDAKKSKANVLERRSTRTRKCISYRFDEFDEAIDEAIEDDIKEADGGGVGRGKDISTI 1059
Query: 890 YRKLGEEVTQKLYNSFKENQYPNR 913
G++++ L KEN+ P R
Sbjct: 1060 TGHRGKDISTILDEERKENKRPQR 1083
Score = 42 (19.8 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 38/190 (20%), Positives = 76/190 (40%)
Query: 834 RRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRT---SY 890
RR K K+K ++ + + ++E S+ S S E T R RR++ +Y
Sbjct: 1164 RRLRRKTQKKKYSDDDEEEEESEENSRDSE-SDFSDDFSDEFVETRRRRSRRNQKRQINY 1222
Query: 891 RKLGE-EVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNHPSSKNA 949
++ E + +QK S + + R K L+ S+ + + + S + +K +
Sbjct: 1223 KEDSESDGSQK---SLRRGKEIRRVHKRRLSS------SESEESYMSKN-SEDDELTKES 1272
Query: 950 KLANSEKGTCTPQ-SNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKNNTQECN-SI 1007
K + ++G T + S + + + +T + GD +E S+
Sbjct: 1273 KRSIRKRGRSTGEYSEADEEEEEEGKPSRKRLHRIETDEESCDSAHGDADQPARESQASV 1332
Query: 1008 KPTSQTSRKR 1017
P+ Q S K+
Sbjct: 1333 LPSEQESSKK 1342
>ZFIN|ZDB-GENE-091204-206 [details] [associations]
symbol:si:dkey-21n12.3 "si:dkey-21n12.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 SMART:SM00384 ZFIN:ZDB-GENE-091204-206 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR018501 PROSITE:PS50827 EMBL:AL929053
GeneTree:ENSGT00530000064411 IPI:IPI00497346
Ensembl:ENSDART00000077161 Bgee:F1Q6Y6 Uniprot:F1Q6Y6
Length = 1369
Score = 125 (49.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 32/80 (40%), Positives = 41/80 (51%)
Query: 512 SLFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDE 571
S SE ++D C CG + I+LCD +CD G+H CL PPL+ I PD E
Sbjct: 842 STSSSEDDTPNDDP-CKHCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE 894
Query: 572 GWLCPGCDCKVDCIDLVNEL 591
W CP C K+ C L +L
Sbjct: 895 -WFCPPCQHKLLCDRLEEQL 913
Score = 73 (30.8 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 61/310 (19%), Positives = 129/310 (41%)
Query: 42 SEPLESKSLLGSEAVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPS-EDMRKSTQT 100
S+ + +SLL +A E +E S+ ++ + + + S D+ + S E++ K T +
Sbjct: 409 SKESKGESLL-KDAPSKESKEESLKDAPSKEE-SKESKEESLKDNPSKESKEEILKDTPS 466
Query: 101 --NKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDKPQATSLVDNATLQPV-SKD 157
+K + S++ G L E K L + K + SL D + SKD
Sbjct: 467 KESKQESLKDTPSKESKGESLKDAPSKESKESLLKESKESKEE--SLKDPPGKESAKSKD 524
Query: 158 VSKSSQTGNRQALDFLSGNRCNELDVDCVHSEPLNQKHQLGSEIIQNEPAVNIARLPSDG 217
K+ +++L+ +S + + D +P ++K L + I NE ++++ D
Sbjct: 525 -DKTKALSKKESLEDISNEKSAKSLKDDATKDP-SKKESL--QDISNESTKSVSK--DDA 578
Query: 218 VEENL-QTISEDLTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISSHE 276
+++ + S+DL ++ K A ++S + S + P P S
Sbjct: 579 AQDHFNKESSKDLAS-----------EESGKDQPAKDLS--NEESIKNPPNQKP--SKDL 623
Query: 277 PSVVNYKLGSQLEQTELGETSAGELGASLELVVKSSIEQLKQPEVPITIPSTKTSATKHL 336
+ K+ + E ++ S E+ + E K S+++ T ++ AT
Sbjct: 624 AKKESQKVIPESESQKV--VSEKEIPKTAEETTKESVKEANATVDNCTSKQSERDATSEE 681
Query: 337 QSSSDLMEKK 346
+ +S ++++K
Sbjct: 682 REASGVVQEK 691
Score = 66 (28.3 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 64/287 (22%), Positives = 124/287 (43%)
Query: 2 SKAEHM-GVSPSQVTSSTRDHSCLKQTTPEQMCKFCAECIHSEPLESKSLLGSEAVEN-E 59
SK E + G S+ S +D K++ E + K S+ + +SL + + E+ E
Sbjct: 401 SKGESLKGSKESKGESLLKDAPS-KESKEESL-KDAPSKEESKESKEESLKDNPSKESKE 458
Query: 60 PRETSIPNSEKLQAFCGDVPDS-SFTDHLAP-PSEDMRKSTQTNKASCSQQNTSEQKHGT 117
P+ E Q D P S + L PS++ ++S ++ S++ + + G
Sbjct: 459 EILKDTPSKESKQESLKDTPSKESKGESLKDAPSKESKESL-LKESKESKEESLKDPPGK 517
Query: 118 ELMHNEQSEQK---HQLCYQIVFDKPQATSLVDNATLQPVSKDVSK--SSQTGNRQALDF 172
E ++ + K + + + ++ A SL D+AT P K+ + S+++ + D
Sbjct: 518 ESAKSKDDKTKALSKKESLEDISNEKSAKSLKDDATKDPSKKESLQDISNESTKSVSKDD 577
Query: 173 LSGNRCN-ELDVDCVHSEP-LNQ--KHQLGSEIIQN----EPAVNIARLPSDGV---EEN 221
+ + N E D E +Q K E I+N +P+ ++A+ S V E+
Sbjct: 578 AAQDHFNKESSKDLASEESGKDQPAKDLSNEESIKNPPNQKPSKDLAKKESQKVIPESES 637
Query: 222 LQTISEDLTKVCPVEPSQSPPRDANKSCQAGEISCL-QQSSSEQTPE 267
+ +SE K P + ++ +++ K A +C +QS + T E
Sbjct: 638 QKVVSE---KEIP-KTAEETTKESVKEANATVDNCTSKQSERDATSE 680
Score = 64 (27.6 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 48/252 (19%), Positives = 82/252 (32%)
Query: 719 AVLED-NRSSGNDEGAASPLGHSNGQRYKDGGXXXXXXXXXXXIIKPGQDGAAPVYGKRS 777
A+ ED + G G + + G R KD +P + AA +R
Sbjct: 993 AIEEDIKEAEGGGAGRGKDMANITGHRGKDMSTILQEEGKENG--RPQRTSAAQKKKRRR 1050
Query: 778 SERLDYKKLYDETYGNVPYXXXXXXXXXXXGGPRKRTKSTK---EGSSASPDGKTPVIRR 834
LD DE + ++ E S D + + R
Sbjct: 1051 LNDLDSDSTVDEEESEDEFRLSDSSEEEFVASENAESEDNAPSLEDSDFDSDAQGSRVNR 1110
Query: 835 RKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEG---CSTPGSR-------GR 884
K ++ ++ + P+RR RP+ +++ + + E T GS
Sbjct: 1111 ANRRKTSRSRIRRKQ-PPRRRRRPRGYSDEEELETDEEEEEEDEMVTEGSSEFSDSDLDV 1169
Query: 885 RHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNHP 944
R R SYR +EV S + + T K+ K L+ S F++
Sbjct: 1170 RCRRSYRSRKQEVNY-CETSDSDGSQAS-TNKDKKKKRRRLSSSDSEASFQSAESEEEER 1227
Query: 945 SSKNAKLANSEK 956
K + +SE+
Sbjct: 1228 KPKKIRADSSEE 1239
Score = 62 (26.9 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 77/374 (20%), Positives = 147/374 (39%)
Query: 42 SEPLESKSLLGSE-AVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPSEDMRKSTQT 100
+E ++ K+L ++ A++N+ + IP ++ D +S AP E + ++
Sbjct: 330 TEEVKRKTLEETQRALKND-HQAKIPLKKREMKLSEDFDSNSAGLRNAPVKESNIPNKES 388
Query: 101 NKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDKPQATSLVDNATLQPVSKDVSK 160
+ S + E K G L +++S+ + ++ D P S ++ P SK+ SK
Sbjct: 389 KEDSLKDAQSKESK-GESLKGSKESKGE-----SLLKDAPSKESKEESLKDAP-SKEESK 441
Query: 161 SSQTGNRQALDFLSGNRCNELDVDCVHSEPLNQKHQ--LGSEIIQNEPAVNIARLPSDGV 218
S+ + L N E + + P + Q L + ++ PS
Sbjct: 442 ESKE------ESLKDNPSKESKEEILKDTPSKESKQESLKDTPSKESKGESLKDAPSKES 495
Query: 219 EENLQTIS----EDLTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISS 274
+E+L S E+ K P + S D K+ E L+ S+E++ + ++
Sbjct: 496 KESLLKESKESKEESLKDPPGKESAKSKDDKTKALSKKE--SLEDISNEKSAKSLKDDAT 553
Query: 275 HEPSVVNYKLGSQLEQTELGETSAGELGASLELVVKSSIEQLKQPEVPITIPSTKTSATK 334
+PS K S + + S + A+ + K S + L E P+ S +
Sbjct: 554 KDPS----KKESLQDISNESTKSVSKDDAAQDHFNKESSKDLASEESGKDQPAKDLSNEE 609
Query: 335 HLQS------SSDLMEKKSCLEQSETPPNYVANNSACLGRKGKRATK-SLKN-NYTVRSL 386
+++ S DL +K+S E+ V + + + + TK S+K N TV +
Sbjct: 610 SIKNPPNQKPSKDLAKKESQKVIPESESQKVVSEKE-IPKTAEETTKESVKEANATVDNC 668
Query: 387 IGSDRVLRSRSGER 400
+ S ER
Sbjct: 669 TSKQSERDATSEER 682
Score = 55 (24.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 57/263 (21%), Positives = 105/263 (39%)
Query: 236 EPSQSPPRDANKSCQAGE-ISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGSQLEQTELG 294
E + +DA GE + ++S E + P S E S+ + S+ E E
Sbjct: 387 ESKEDSLKDAQSKESKGESLKGSKESKGESLLKDAPSKESKEESLKDAP--SKEESKESK 444
Query: 295 ETSAGELGA--SLELVVKSS-IEQLKQPEVPITIPSTKTSATKHLQSSSDLMEKKSCLEQ 351
E S + + S E ++K + ++ KQ + T PS K S + L+ + K+S L++
Sbjct: 445 EESLKDNPSKESKEEILKDTPSKESKQESLKDT-PS-KESKGESLKDAPSKESKESLLKE 502
Query: 352 S-ETPPNYVANNSACLGRKGKR-ATKSLKNNYTVRSLIGSDRVLRSRSGERPIPPESSIN 409
S E+ + + K K TK+L ++ I +++ +S + P +
Sbjct: 503 SKESKEESLKDPPGKESAKSKDDKTKALSKKESLED-ISNEKSAKSLKDDATKDPSKKES 561
Query: 410 LADVN-----SIG-EXXXXXXXXXXXXXIVADEYSRIRTHLRYLLNRINYEQNLIDAYSS 463
L D++ S+ + +A E S + L N + + N + S
Sbjct: 562 LQDISNESTKSVSKDDAAQDHFNKESSKDLASEESGKDQPAKDLSNEESIK-NPPNQKPS 620
Query: 464 EGWKGLSVEKLKPEKELQRATSE 486
+ +K+ PE E Q+ SE
Sbjct: 621 KDLAKKESQKVIPESESQKVVSE 643
Score = 50 (22.7 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 810 PRK-RTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNIS 868
P+K R S++E S + + RRR+S + ++ +R R ++N DS+ S
Sbjct: 1229 PKKIRADSSEEEESRKRRRRLSLKRRRESEDDDDDDDSDESEEEERPVRKRVNRIDSDES 1288
Query: 869 PAK 871
+K
Sbjct: 1289 ASK 1291
Score = 50 (22.7 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 816 STKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEG 875
S +GS AS + RRR S+ ++ E+ + R +PK DS+ + E
Sbjct: 1188 SDSDGSQASTNKDKKKKRRRLSSSDSEASFQSAESEEEER-KPKKIRADSS----EEEE- 1241
Query: 876 CSTPGSRGRRHRTSYRKLGE 895
SR RR R S ++ E
Sbjct: 1242 -----SRKRRRRLSLKRRRE 1256
Score = 46 (21.3 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 28/137 (20%), Positives = 53/137 (38%)
Query: 839 KAAKEKLNETENTPKRRGRPKLNT---EDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGE 895
+A +E + E E RG+ N ++S EG GR RTS +
Sbjct: 992 EAIEEDIKEAEGGGAGRGKDMANITGHRGKDMSTILQEEG----KENGRPQRTS---AAQ 1044
Query: 896 EVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWF--ENTRWSFNHPSSKNAKLAN 953
+ ++ N + + +E E L+ S ++ EN N PS +++ +
Sbjct: 1045 KKKRRRLNDLDSD---STVDEEESEDEFRLSDSSEEEFVASENAESEDNAPSLEDSDFDS 1101
Query: 954 SEKGTCTPQSNKNTVGR 970
+G+ ++N+ R
Sbjct: 1102 DAQGSRVNRANRRKTSR 1118
Score = 42 (19.8 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKL 860
+KR + + S AS RK K + +E E + KRR R L
Sbjct: 1203 KKRRRLSSSDSEASFQSAESEEEERKPKKIRADS-SEEEESRKRRRRLSL 1251
>MGI|MGI:2444959 [details] [associations]
symbol:Mll3 "myeloid/lymphoid or mixed-lineage leukemia 3"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016571 "histone methylation"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051568 "histone
H3-K4 methylation" evidence=ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR000637 InterPro:IPR001214
InterPro:IPR001594 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00384
SMART:SM00541 SMART:SM00542 MGI:MGI:2444959 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 eggNOG:COG2940
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GO:GO:0035097 HOVERGEN:HBG045586 ChiTaRS:MLL3 EMBL:AY138582
EMBL:AC116469 EMBL:AC127319 EMBL:AC134910 EMBL:AK044828
EMBL:AK054270 EMBL:AK077567 EMBL:AY036886 EMBL:AY036887
IPI:IPI00620674 IPI:IPI00623069 UniGene:Mm.332268
ProteinModelPortal:Q8BRH4 SMR:Q8BRH4 IntAct:Q8BRH4 STRING:Q8BRH4
PhosphoSite:Q8BRH4 PaxDb:Q8BRH4 PRIDE:Q8BRH4 UCSC:uc008wsv.1
HOGENOM:HOG000113602 InParanoid:Q8BRH4 OrthoDB:EOG4THVS4
Bgee:Q8BRH4 CleanEx:MM_MLL3 Genevestigator:Q8BRH4
GermOnline:ENSMUSG00000038056 Uniprot:Q8BRH4
Length = 4903
Score = 117 (46.2 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 100/380 (26%), Positives = 159/380 (41%)
Query: 16 SSTR-DHSCLKQTT----PEQMCKFCAECIHSEPLESKSLLGSEAVENEPR-ETSIPNSE 69
SST+ H+CL T + +C FC +C H E L+ K +L + E P +
Sbjct: 444 SSTQWHHNCLICDTCYQQQDNLCPFCGKCYHPE-LQ-KDMLHCNMCKRWVHLECDKPTDQ 501
Query: 70 KLQAFCGDVPDSSFTDHLAPPSEDMRKSTQTNKASCSQQNTSEQK-HGTE--LMHNEQSE 126
+L + + + HL + + + S + GTE ++ EQ+
Sbjct: 502 ELDSQLKEDYICMYCKHLGAEIDPLHPGNEVEMPELPTDYASGMEIEGTEDEVVFLEQTV 561
Query: 127 QK----HQLCYQIVFDKPQATS--LVDNATLQPVSKDVSKSSQTGNRQALDFLSGNRCNE 180
K HQ IV D T N P + + S + N+ D L+ +E
Sbjct: 562 NKDVSDHQCRPGIVPDVQVYTEEPQKSNPLESPDTVGLITSESSDNKMNPD-LANEIAHE 620
Query: 181 LDVDCVHSEPLNQKHQLGSEIIQNEPAV----NIARLPSDGV--EENLQTISEDLTKVCP 234
+D + +E L++ + E QNE + NI LP + +E+L +SED ++V
Sbjct: 621 VDTE--KTEMLSKGRHVCEED-QNEDRMEVTENIEVLPHQTIVPQEDL-LLSED-SEVAS 675
Query: 235 VEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGSQLEQTELG 294
E SPP+ A ++ A E L SE++ +S EP ++ ++ ++EQ E
Sbjct: 676 KE--LSPPKSAPETA-APE--ALLSPHSERS------LSCKEP-LLTERVQEEMEQKENS 723
Query: 295 ETSAGELGASLELVVKS-----SIEQLKQPEVPITIPSTKTSATK----HLQSSSDLM-E 344
E S G + + L V S S + K E+P ST +SAT + SSS L +
Sbjct: 724 EFSTGCVDFEMTLAVDSCDKDSSCQGDKYVELPAEEESTFSSATDLNKADVSSSSTLCSD 783
Query: 345 KKSCLEQSETPPNYVANNSA 364
SC PP + NSA
Sbjct: 784 LPSCDMLHGYPPAF---NSA 800
Score = 99 (39.9 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 516 SEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLC 575
S+G E C CG + ++LCD CD +H YCL+PPL + +P GW C
Sbjct: 992 SKGWRCLECTVCEACGKA--TDPGRLLLCDD-CDISYHTYCLDPPL--QTVPKG--GWKC 1044
Query: 576 PGC 578
C
Sbjct: 1045 KWC 1047
Score = 83 (34.3 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 513 LFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEG 572
LF S + + C CGS A+ ++ C C + +H YC+ + K + +G
Sbjct: 939 LFSSSDKFTLQQDMCVVCGSFGQGAEGRLLACS-QCGQCYHPYCVSIKITKVVL---SKG 994
Query: 573 WLCPGC 578
W C C
Sbjct: 995 WRCLEC 1000
Score = 56 (24.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 821 SSASPDGKTPVIRRRKSTKAAKEKLNET-------ENTPKRRGRPKLNTED--SNISPAK 871
+S P G+ P + + ++ + + L + E K+R R K +D S +P+
Sbjct: 3560 NSNVPCGQDPAVTQGQNYSGSSQSLIQLYSDIIPEEKGKKKRTRKKKKDDDAESGKAPST 3619
Query: 872 SHEGCSTPGSRGRRHRTS 889
H C+ P + G TS
Sbjct: 3620 PHSDCAAPLTPGLSETTS 3637
Score = 53 (23.7 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTP 852
G +KRT+ K+ A GK P L+ET +TP
Sbjct: 3597 GKKKRTRKKKKDDDAE-SGKAPSTPHSDCAAPLTPGLSETTSTP 3639
Score = 41 (19.5 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 1015 RKRDRDGKSGDQASDPSSKME--VIQGLSANSPKVEVQANGRTRRRR 1059
+K+D D +SG S P S + GLS + V + ++R
Sbjct: 3605 KKKDDDAESGKAPSTPHSDCAAPLTPGLSETTSTPAVSSPSELPQQR 3651
Score = 40 (19.1 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 817 TKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRP 858
++EG DGK+ R++ + + T+ KR+ +P
Sbjct: 1229 SREGELMDCDGKSESSPEREAGDDETKGIEGTDAIKKRKRKP 1270
Score = 37 (18.1 bits), Expect = 0.00060, Sum P(4) = 0.00060
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQA 1027
+G ++ Q + I P + +KR R K D A
Sbjct: 3578 SGSSQSLIQLYSDIIPEEKGKKKRTRKKKKDDDA 3611
>UNIPROTKB|F1P8R2 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050434 "positive regulation of viral
transcription" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043392 "negative regulation of DNA binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0045892
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006352
GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016584 GO:GO:0006334 GO:GO:0050434
GO:GO:0043392 GO:GO:0031213 CTD:51773 KO:K11657 OMA:QPRVLPS
EMBL:AAEX03012787 GeneTree:ENSGT00530000064411 EMBL:AAEX03012788
RefSeq:XP_534002.2 Ensembl:ENSCAFT00000007880 GeneID:476797
KEGG:cfa:476797 Uniprot:F1P8R2
Length = 1434
Score = 144 (55.7 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 42/126 (33%), Positives = 61/126 (48%)
Query: 471 VEKLKPEKELQRATSEILRR-KLKIRDLFQRLDSLCAGGFPKSLFDSEGQ---IDSEDIY 526
V K+KP+ +++ S R K D + DS + + + E + + +D
Sbjct: 831 VSKVKPKGKVRWTGSRTRGRWKYSSNDESEASDSEKSSAASEEEEEKESEEAILADDDEP 890
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP C K+ C
Sbjct: 891 CKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCPPCQHKLLCEK 943
Query: 587 LVNELQ 592
L +LQ
Sbjct: 944 LEEQLQ 949
Score = 58 (25.5 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 25/98 (25%), Positives = 41/98 (41%)
Query: 819 EGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCST 878
E + + K V +R +ST E E E P R+ ++ T++ + A H
Sbjct: 1256 EDDELAKESKRSVRKRGRSTDEYSEADEEEEGKPSRKRLHRIETDEESCDNA--HGDADQ 1313
Query: 879 PGSRGRRHRTSYRKLG--EEVTQKLY--NSFKENQYPN 912
P H + R L +E T+K Y +S +E + N
Sbjct: 1314 PA-----HDSQPRVLPSQQESTKKPYRIDSDEEEDFEN 1346
Score = 54 (24.1 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 833 RRRKSTKAAKEKLN-----ETENTPK--RRGRPKLNTEDSNISPAKSHEGCSTPGSR--- 882
RRR+S + K ++N E++ + K RRG+ +S ++S E + S
Sbjct: 1200 RRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYMSKNSEDDE 1259
Query: 883 -GRRHRTSYRKLGEEVTQKLYNSFKENQYPNR 913
+ + S RK G + +E P+R
Sbjct: 1260 LAKESKRSVRKRGRSTDEYSEADEEEEGKPSR 1291
Score = 53 (23.7 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 24/93 (25%), Positives = 38/93 (40%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRP-KLNTEDSNISPAKSHEGCSTPGS-- 881
PD ++K +K AK L E +T R+ + + D I A + G
Sbjct: 984 PDFSEDHEEKKKDSKKAKANLLERRSTRTRKCISYRFDEFDEAIDEAIEDDIKEADGGGA 1043
Query: 882 -RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNR 913
RG+ T G++++ L KEN+ P R
Sbjct: 1044 GRGKDISTITGHRGKDISTILDEERKENKRPQR 1076
Score = 51 (23.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 25/95 (26%), Positives = 39/95 (41%)
Query: 259 QSSSEQTPEFTPGISSHEPSVVNYKLGSQLEQTELGETSAGELGASLELVVKSSIEQLKQ 318
+S +PE G + + KL S+ E E TS+ E G LE K+ E LK+
Sbjct: 613 ESGKPVSPEAAEGSAPSNMTDHCEKLASEKEVVECQNTSSTE-GQPLE---KTDPEILKK 668
Query: 319 PEVPITIPSTKTSATKHLQSSSDLMEKKSCLEQSE 353
+ T + D E KS +++S+
Sbjct: 669 DSESTKV-ETDNLDNAQTSGTEDPSEAKSSVQKSK 702
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(3) = 0.00015
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRR 835
RKR +ST E S A + + R+R
Sbjct: 1269 RKRGRSTDEYSEADEEEEGKPSRKR 1293
>UNIPROTKB|H0YDG9 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000531026
Bgee:H0YDG9 Uniprot:H0YDG9
Length = 276
Score = 133 (51.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 30/66 (45%), Positives = 37/66 (56%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP C K+ C
Sbjct: 3 CKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCPPCQHKLLCEK 55
Query: 587 LVNELQ 592
L +LQ
Sbjct: 56 LEEQLQ 61
Score = 51 (23.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRP-KLNTEDSNISPAKSHEGCSTPGS-- 881
PD ++K +K +K L E +T R+ + + D I A + G
Sbjct: 96 PDFSEDQEEKKKDSKKSKANLLERRSTRTRKCISYRFDEFDEAIDEAIEDDIKEADGGGV 155
Query: 882 -RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNR 913
RG+ T G++++ L KEN+ P R
Sbjct: 156 GRGKDISTITGHRGKDISTILDEERKENKRPQR 188
>UNIPROTKB|J9P712 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000046673 Uniprot:J9P712
Length = 1626
Score = 140 (54.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 518 GQIDSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
G+ + ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP
Sbjct: 172 GEEEEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCP 224
Query: 577 GC 578
C
Sbjct: 225 EC 226
Score = 66 (28.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 23/108 (21%), Positives = 48/108 (44%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
R++TKS SS+ +R+K+ + + + ++ +RR R + + S+
Sbjct: 1040 RQQTKSRGRRSSSDHSSSHERAKRKKAKEEGRRRKRDSWGHGRRRSRSRSGSPGSS---- 1095
Query: 871 KSHEGCSTPGSRGRRHRTSYRKLGEEVTQ-KLYNSFKENQYPNRTTKE 917
SHE R +R R+ R G E + + + +++P ++E
Sbjct: 1096 -SHE--RRESRRRKRRRSGSRSRGRECSPASSLDRARRHRHPRERSRE 1140
Score = 45 (20.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 18/81 (22%), Positives = 29/81 (35%)
Query: 969 GRVSN---CNGAENVQSSKTGVDDTGCMTGDVKNNTQECNSIKPTSQTSRKRDRDGKSGD 1025
GR+SN CN V + ++ + K + P T G S +
Sbjct: 778 GRLSNPGFCNTFRPVDNKVQRKENPSPLFSIRKTKQLKSEIYDPFDPTGSDSSSAGSSPE 837
Query: 1026 QASDPSSKMEVIQGLSANSPK 1046
+ E+ + +S NSPK
Sbjct: 838 RLGSGLLPSEITRTISINSPK 858
Score = 41 (19.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNI 867
G R R++S GSS+ ++ +RR+S ++ + ++ R R + E S
Sbjct: 1081 GRRRSRSRSGSPGSSSHERRESRRRKRRRSGSRSRGRECSPASSLDRARRHRHPRERSRE 1140
Query: 868 SPA---KSHEG----CSTPGSRGRRHRT 888
P SHE +P S HR+
Sbjct: 1141 RPRIRWGSHERRKRRSRSPRSPSTEHRS 1168
>UNIPROTKB|F1PXY6 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000010559 Uniprot:F1PXY6
Length = 1637
Score = 140 (54.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 518 GQIDSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
G+ + ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP
Sbjct: 181 GEEEEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCP 233
Query: 577 GC 578
C
Sbjct: 234 EC 235
Score = 66 (28.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 23/108 (21%), Positives = 48/108 (44%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
R++TKS SS+ +R+K+ + + + ++ +RR R + + S+
Sbjct: 1052 RQQTKSRGRRSSSDHSSSHERAKRKKAKEEGRRRKRDSWGHGRRRSRSRSGSPGSS---- 1107
Query: 871 KSHEGCSTPGSRGRRHRTSYRKLGEEVTQ-KLYNSFKENQYPNRTTKE 917
SHE R +R R+ R G E + + + +++P ++E
Sbjct: 1108 -SHE--RRESRRRKRRRSGSRSRGRECSPASSLDRARRHRHPRERSRE 1152
Score = 45 (20.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 18/81 (22%), Positives = 29/81 (35%)
Query: 969 GRVSN---CNGAENVQSSKTGVDDTGCMTGDVKNNTQECNSIKPTSQTSRKRDRDGKSGD 1025
GR+SN CN V + ++ + K + P T G S +
Sbjct: 790 GRLSNPGFCNTFRPVDNKVQRKENPSPLFSIRKTKQLKSEIYDPFDPTGSDSSSAGSSPE 849
Query: 1026 QASDPSSKMEVIQGLSANSPK 1046
+ E+ + +S NSPK
Sbjct: 850 RLGSGLLPSEITRTISINSPK 870
Score = 41 (19.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNI 867
G R R++S GSS+ ++ +RR+S ++ + ++ R R + E S
Sbjct: 1093 GRRRSRSRSGSPGSSSHERRESRRRKRRRSGSRSRGRECSPASSLDRARRHRHPRERSRE 1152
Query: 868 SPA---KSHEG----CSTPGSRGRRHRT 888
P SHE +P S HR+
Sbjct: 1153 RPRIRWGSHERRKRRSRSPRSPSTEHRS 1180
>UNIPROTKB|I3LU11 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:FP015900
Ensembl:ENSSSCT00000024857 Uniprot:I3LU11
Length = 1643
Score = 143 (55.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 518 GQIDSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
G+ + ED +C CG D ++ ++LCDG CD G+H CLEPPL +++P D+ W CP
Sbjct: 175 GEHEEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLEPPL--QEVPVDE--WFCP 227
Query: 577 GC 578
C
Sbjct: 228 EC 229
Score = 74 (31.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 834 RRKSTKAAKEKLNETENTPKRRG---RPKLNTEDSNISP-AKSHEGCSTPGSRGRRHRTS 889
R S + AK K + ++ +RRG R + + + SP + SHE G R +R R+
Sbjct: 1047 RSSSHERAKRKKAKAKSRERRRGSWGRGRRRSRSRSCSPGSSSHE--HREGRRRKRRRSG 1104
Query: 890 YRKLGEEVTQKLYNSFKENQYPN--RTTKESLAKELGL 925
R G E + +S + + P R +E L KE G+
Sbjct: 1105 SRSRGREGSPP--SSLERGRRPRHPRERRERLDKEGGV 1140
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 22/84 (26%), Positives = 35/84 (41%)
Query: 810 PR-KRTKSTKEGSSASPDGKTPVIRR-RKSTKAAKEKLNETENTPK---RRGRPKLNTED 864
PR +R + KEG D + RR R+S + E P+ +R RP+ + D
Sbjct: 1127 PRERRERLDKEGGVRPRDRRGSRERRKRRSRSPSLEHRPREHRRPRSREKRPRPRARSPD 1186
Query: 865 SNISPAKSHEGCSTPGSRG--RRH 886
++P ++ G G R H
Sbjct: 1187 KKLAPKEASPVPPPQGEPGPDREH 1210
Score = 52 (23.4 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 809 GPRKRTKSTKEGSSA-SPDGKTPVIR-RRKSTKAAKEKLNETENTPKRRGR 857
G RK+ K+ S S GK+ R RR+ ++A + K + +N R R
Sbjct: 342 GRRKKVPGRKKSQSRPSAKGKSCGTRLRRRQSRAKRRKGQKAKNEATARAR 392
Score = 52 (23.4 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNI 867
G R R++S GSS+ + +RR+S ++ + ++ +R RP+ E
Sbjct: 1074 GRRRSRSRSCSPGSSSHEHREGRRRKRRRSGSRSRGREGSPPSSLERGRRPRHPRERRE- 1132
Query: 868 SPAKSHEGCSTP----GSRGRRHRTS 889
EG P GSR RR R S
Sbjct: 1133 --RLDKEGGVRPRDRRGSRERRKRRS 1156
Score = 51 (23.0 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 17/91 (18%), Positives = 33/91 (36%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRK----STKAAKEKLNETENTPKRRGRPKLNTED 864
G R + S SP G +R + S +++ ++ + E +++ + K
Sbjct: 1008 GSRSSRSGDRSSRSVSPAGAEDQAKRHRPKARSRRSSSDRSSSHERAKRKKAKAKSRERR 1067
Query: 865 SNI---SPAKSHEGCSTPGSRGRRHRTSYRK 892
+S +PGS HR R+
Sbjct: 1068 RGSWGRGRRRSRSRSCSPGSSSHEHREGRRR 1098
Score = 43 (20.2 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 17/74 (22%), Positives = 26/74 (35%)
Query: 983 SKTGVDDTGCMTGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASDPSSKMEVIQGLSA 1042
S T T G K Q+ +S + S R +SGD++S S
Sbjct: 974 SPTRSRSTSSSRGRKKAQRQQASSREHKRARSGSGSRSSRSGDRSSRSVSPAGAEDQAKR 1033
Query: 1043 NSPKVEVQANGRTR 1056
+ PK + + R
Sbjct: 1034 HRPKARSRRSSSDR 1047
Score = 39 (18.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 1004 CNSIKPTSQTSRKRD 1018
CN+ +P +++RD
Sbjct: 794 CNTFRPVDSKAQRRD 808
Score = 37 (18.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 719 AVLEDNRSSGNDEGAASPLGHSNGQ 743
A E + +SG +PLG S G+
Sbjct: 741 AAREPSAASGGAPQPPAPLGPSRGK 765
>UNIPROTKB|F1STY8 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050434 "positive regulation of viral transcription"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0031213 "RSF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016584
GO:GO:0006334 GO:GO:0050434 GO:GO:0043392 GO:GO:0031213 OMA:QPRVLPS
GeneTree:ENSGT00530000064411 EMBL:CU633553 EMBL:CU915366
Ensembl:ENSSSCT00000016236 Uniprot:F1STY8
Length = 1344
Score = 142 (55.0 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 42/126 (33%), Positives = 61/126 (48%)
Query: 471 VEKLKPEKELQRATSEILRR-KLKIRDLFQRLDSLCAGGFPKSLFDSEGQ---IDSEDIY 526
V K+KP+ +++ S R K D + DS + + + E + + +D
Sbjct: 738 VTKVKPKGKVRWTGSRTRGRWKYSSNDESEGSDSEKSSAASEEEEEKESEEAILADDDEP 797
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP C K+ C
Sbjct: 798 CKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCPPCQHKLLCEK 850
Query: 587 LVNELQ 592
L +LQ
Sbjct: 851 LEEQLQ 856
Score = 55 (24.4 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 54/268 (20%), Positives = 100/268 (37%)
Query: 96 KSTQTNKASCSQQNTSEQKHGTELMHNEQSEQ----KHQLCYQIVFDKPQATSLVDNAT- 150
+S SQ+ T + TE + N+Q + K ++ FD P L + T
Sbjct: 260 RSDPGGNVKSSQEATEKSTEETEKLKNDQQAKIPLKKREIKLSDDFDSPIKGPLCKSVTP 319
Query: 151 LQPVSKDVSKSSQ----------TGNRQALDFLSGNRCNELDVDCVHSEPLNQK-HQLGS 199
+ KD K + T + ++G +E +E ++ K +
Sbjct: 320 TKEFLKDELKQEEETCRRISAITTLGHEGKQLVNGEVSDEKVTPNFKTEQMDVKFYDTKE 379
Query: 200 EIIQNEPAVNIARLPSDGVEENLQTISEDLTKVCPVEPSQSP-PRDANKSCQAGEISCLQ 258
E + N+ + +G E +L ++ + K+ +E P +DA+ S E C +
Sbjct: 380 ESCSSSKDRNVL-MEGNGAE-SLNSVITSM-KIGDLEREMVPLGKDADSSVSVLETQCQK 436
Query: 259 QSSSEQTPEFTPGISSHEPSVVNYKLGSQLE-QTELGETSAGELGASLELVVKSSIEQLK 317
+ E P P + E S+ ++ L +T L T + + +E S + +
Sbjct: 437 RHIEETDP---PEM---ETSLETSEMAKDLSLKTALSTTESYSM--KIEEKSPKSKKDKR 488
Query: 318 QPEVPITIPSTKTSATKHLQSSSDLMEK 345
P + S KT K Q S + E+
Sbjct: 489 SPVLECLEKSKKTFLDKDTQRLSPIPEE 516
Score = 54 (24.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 21/88 (23%), Positives = 40/88 (45%)
Query: 833 RRRKSTKAAKEKLN-----ETENTPK--RRGRPKLNTEDSNISPAKSHEGCSTPGSR--- 882
RRR+S + K ++N E++ + K RRG+ +S ++S E + S
Sbjct: 1107 RRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYMSKNSEDDE 1166
Query: 883 -GRRHRTSYRKLGEEVTQKLYNSFKENQ 909
++ + S RK G + Y+ E++
Sbjct: 1167 LAKKSKRSVRKRGRSTDE--YSEADEDE 1192
Score = 54 (24.1 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 32/164 (19%), Positives = 64/164 (39%)
Query: 194 KHQLGSEIIQNEPAVN-IARLPSDGVEENLQTISEDLTKVCPVEPSQSPPRDANKSCQAG 252
K L E+ Q E I+ + + G E Q ++ +++ V P+ + K
Sbjct: 321 KEFLKDELKQEEETCRRISAITTLG-HEGKQLVNGEVSDE-KVTPNFKTEQMDVKFYDTK 378
Query: 253 EISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGS-QLEQTELGETSAGELGASLELVVKS 311
E SC E G S + + K+G + E LG+ + + K
Sbjct: 379 EESCSSSKDRNVLMEGN-GAESLNSVITSMKIGDLEREMVPLGKDADSSVSVLETQCQKR 437
Query: 312 SIEQLKQPEVPITIPSTKTSATKHLQSSSDLMEKKSCLEQSETP 355
IE+ PE+ ++ +++ + L+++ E S + ++P
Sbjct: 438 HIEETDPPEMETSLETSEMAKDLSLKTALSTTESYSMKIEEKSP 481
Score = 49 (22.3 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRP-KLNTEDSNISPAKSHEGCSTPGS-- 881
PD ++K +K +K L E +T R+ + + D I A + G
Sbjct: 891 PDFSEDHEEKKKDSKKSKVNLLERRSTRTRKCISYRFDEFDEAIDEAIEDDIKEADGGGV 950
Query: 882 -RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNR 913
RG+ T G++++ L KEN+ P R
Sbjct: 951 GRGKDISTITGHRGKDISTILDEERKENKRPQR 983
Score = 42 (19.8 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSN--IS 868
RKR +ST E S A D + RK + + + +E E+ G DS +
Sbjct: 1176 RKRGRSTDEYSEADEDEEEEGKPSRK--RLHRIETDEEESCDNAHGDAAQPARDSQPRVL 1233
Query: 869 PAKSHEGCSTP 879
PA+ E P
Sbjct: 1234 PAEQ-ESTKRP 1243
>UNIPROTKB|I3LTW3 [details] [associations]
symbol:I3LTW3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00390000008296
EMBL:AEMK01185240 EMBL:CU928954 Ensembl:ENSSSCT00000025343
Uniprot:I3LTW3
Length = 113
Score = 121 (47.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 542 ILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDN 601
+LCD C+ +H YCL PPL D P++E W CP C K D ++V G RL ++
Sbjct: 3 VLCD-ECNMAYHIYCLNPPL---DKVPEEEYWYCPSC--KTDSSEVVKA--GERLKMSKK 54
Query: 602 WEKVFPEAAAGHNQDPNFGLA 622
K+ P A+ +D G+A
Sbjct: 55 KAKM-PSASTESRRDWGRGMA 74
>UNIPROTKB|H0YLB0 [details] [associations]
symbol:PBX1 "Pre-B-cell leukemia transcription factor 1,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0030278 "regulation of ossification"
evidence=IEA] [GO:0030325 "adrenal gland development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048706 "embryonic skeletal system development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR005542 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0030325
GO:GO:0009952 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0045665 EMBL:CH471067 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009887 GO:GO:0030326
GO:GO:0048536 GO:GO:0048538 GO:GO:0009954 GO:GO:0001658
GO:GO:0035162 GO:GO:0048706 GO:GO:0030278 EMBL:AL359255
EMBL:AL357568 EMBL:AL390119 EMBL:AL391001 UniGene:Hs.557097
HGNC:HGNC:8632 ChiTaRS:PBX1 SMR:H0YLB0 Ensembl:ENST00000468104
Ensembl:ENST00000560469 Ensembl:ENST00000560641 Uniprot:H0YLB0
Length = 325
Score = 139 (54.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 129 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 188
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 189 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSL 248
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 249 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 297
>UNIPROTKB|O15499 [details] [associations]
symbol:GSC2 "Homeobox protein goosecoid-2" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009653
"anatomical structure morphogenesis" evidence=TAS] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009653 EMBL:U96402 IPI:IPI00006760 RefSeq:NP_005306.1
UniGene:Hs.534318 ProteinModelPortal:O15499 SMR:O15499
STRING:O15499 PaxDb:O15499 PRIDE:O15499 DNASU:2928
Ensembl:ENST00000086933 GeneID:2928 KEGG:hsa:2928 UCSC:uc011ags.2
CTD:2928 GeneCards:GC22M019136 HGNC:HGNC:4613 HPA:HPA043011
MIM:601845 neXtProt:NX_O15499 PharmGKB:PA162390265 eggNOG:NOG244876
HOGENOM:HOG000112823 HOVERGEN:HBG005922 InParanoid:O15499 KO:K09325
OMA:PAAPCAC OrthoDB:EOG4RFKV2 PhylomeDB:O15499 GenomeRNAi:2928
NextBio:11607 Bgee:O15499 CleanEx:HS_GSC2 Genevestigator:O15499
GermOnline:ENSG00000063515 Uniprot:O15499
Length = 205
Score = 132 (51.5 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 37/93 (39%), Positives = 49/93 (52%)
Query: 875 GCSTPGS--RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRK 932
G PGS R RRHRT + EE Q L F +NQYP+ +T+E LA + L +V
Sbjct: 116 GAVGPGSQRRTRRHRTIF---SEEQLQALEALFVQNQYPDVSTRERLAGRIRLREERVEV 172
Query: 933 WFENTR--WSFNHPSSKNAKLA----NSEKGTC 959
WF+N R W +S +A+L S KG+C
Sbjct: 173 WFKNRRAKWRHQKRASASARLLPGVKKSPKGSC 205
>FB|FBgn0036203 [details] [associations]
symbol:Muc68D "Mucin 68D" species:7227 "Drosophila
melanogaster" [GO:0016490 "structural constituent of peritrophic
membrane" evidence=ISS] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=ISM] [GO:0005201 "extracellular
matrix structural constituent" evidence=ISM] InterPro:IPR002557
Pfam:PF01607 PROSITE:PS50940 SMART:SM00494 GO:GO:0005576
EMBL:AE014296 eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061
GO:GO:0005201 CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625
GO:GO:0006030 GeneTree:ENSGT00700000104174 EMBL:AY075323
RefSeq:NP_648504.2 UniGene:Dm.20068 SMR:Q9VTN2 MINT:MINT-900668
STRING:Q9VTN2 EnsemblMetazoa:FBtr0076119 GeneID:39326
KEGG:dme:Dmel_CG6004 UCSC:CG6004-RB CTD:39326 FlyBase:FBgn0036203
InParanoid:Q9VTN2 OMA:STESSQD OrthoDB:EOG4WSTSF GenomeRNAi:39326
NextBio:813085 Uniprot:Q9VTN2
Length = 1514
Score = 111 (44.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 91/419 (21%), Positives = 166/419 (39%)
Query: 12 SQVTSSTRDHSCLKQTTPEQMCKFCAECIHSEPLESKSLLGSEA-VENEPRETSIPNSEK 70
S S H + ++ E ++S ES S SE+ V NEP + +S
Sbjct: 238 SSTEGSWESHISTDSSIGSKVESLLIEALYSLIQESSS--SSESPVSNEPSTGATDDSSS 295
Query: 71 LQAFCGDVPDSSFTDHLAPPSEDMRKSTQ-TNKASCSQQ--NTSEQKHGTELMHNEQSEQ 127
++ +SS + +P S ++ ST+ TN++S S+ N+S Q + + Q+E
Sbjct: 296 TESLPDSTQESSSSSE-SPVSFEL--STEATNESSSSESLPNSSTQDSSSSTETSFQTES 352
Query: 128 KHQLCYQI--VFDKPQATSLVDNATLQ-PVSKDVSKSSQTGNRQALDFLSGNRCNELDVD 184
+ +P +T+ +++ + P+S + S ++ T + + + E
Sbjct: 353 TTDATDESSSTESQPDSTTQESSSSTEGPLSTE-SSTAVTDQSSSTESSQDSTTQESSSS 411
Query: 185 CVHSEPLNQKHQLGSEIIQNEPAVN-IARLPSDGVEENLQTIS--EDLTKVCPVEPSQSP 241
+ +E E + + + S E L T S E + E SQ
Sbjct: 412 TEGPLSTESSTEATNESSSTESSQDSTTQESSSSTEGPLSTESSTEATNESSSTESSQDS 471
Query: 242 PRDANKSCQAGEISCLQQSSSEQTPEFTPGISSHEPSVVNYKLGSQLEQTELGETSAGEL 301
+ S G +S +SS+E T E + SS + + S+ + T A
Sbjct: 472 TTQESSSSTEGPLST--ESSTEATNESSSTESSQDSTTQESSSSSEGPLSTESSTEATNE 529
Query: 302 GASLELVVKSSI-EQLKQPEVPI-TIPSTKTSATKHLQSSSDLMEKKSCLEQSETPPNYV 359
+S E S+ E E P+ T PST+ + + +SS D ++S +E P +
Sbjct: 530 SSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESS-SSTEDP---L 585
Query: 360 ANNSACLGRKGKRATKSLKNNYTVRSLIGSDRVLRSRSGERPIPPESSINLADVNSIGE 418
+ S+ +T+S +++ T S S S E P+ ESS ++ +S E
Sbjct: 586 STESSTEATNESSSTESSQDSTTQES---------SSSTEGPLSTESSTEGSNESSSTE 635
Score = 91 (37.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 48/232 (20%), Positives = 82/232 (35%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNIS 868
GP ST+ S+S + + S+ E+ +++DS
Sbjct: 816 GPLSTESSTEANESSSTESSQDSTTQESSSSTEDPLSTESSTEATYESSSTESSQDSTTQ 875
Query: 869 PAKSH-EG-CSTPGS-RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGL 925
+ S EG ST S G +S + TQ+ S + P T + A E
Sbjct: 876 ESSSSTEGPLSTESSTEGSNESSSTESSQDSTTQE---SSSSTESPLSTEPSTEANESSS 932
Query: 926 TFSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKT 985
T S + + S P S + +E + + T S+ G + +SS
Sbjct: 933 TESSQDSTTQESSSSTEGPLSTESSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTE 992
Query: 986 GVDDTGCMTGDVKNNTQECNSI--KPTSQTSRKRDRDGKSGDQASDPSSKME 1035
G +++ + TQE +S P S T + + S ++S S+ E
Sbjct: 993 GSNESSSTESSQDSTTQESSSSTESPLS-TEPSTEANESSSTESSQDSTTQE 1043
Score = 88 (36.0 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 48/230 (20%), Positives = 88/230 (38%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPV-IRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNI 867
GP T+S+ EGS+ S ++ +KS+ + + L+ +T +++DS
Sbjct: 617 GPLS-TESSTEGSNESSSTESSQDSTTQKSSSSTESPLSTEPSTEANESSSTESSQDSTT 675
Query: 868 SPAKSH-EG-CSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGL 925
+ S EG ST S +S + TQ+ S ++ P T + A E
Sbjct: 676 QESSSSTEGPLSTEPSTEANESSSTESSQDSTTQE---SSSSSEGPLSTESSTEANESSS 732
Query: 926 TFSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKT 985
T S + + S P S +E + + T S+ G + + S T
Sbjct: 733 TESSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTEPS-T 791
Query: 986 GVDDTGCMTGDVKNNTQECNSIK--PTSQTSRKRDRDGKSGDQASDPSSK 1033
+++ + TQE +S P S S + S + + D +++
Sbjct: 792 EANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQ 841
Score = 86 (35.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 65/390 (16%), Positives = 129/390 (33%)
Query: 679 SSEDSEDDEYNPDAPELDDKVTQEXXXXXXXXXXXXXXLAAVLEDNRSSGNDEGAASPLG 738
S+E S+D + + ++ E + +++ SS + P
Sbjct: 633 STESSQDSTTQKSSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTEPST 692
Query: 739 HSNGQRYKDGGXXXXXXXXXXXIIKPGQDGAAPVYGKRSSERLDYKKLYDETYGNV--PY 796
+N + P ++ + SS E+ + P
Sbjct: 693 EANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQESSSSTESPL 752
Query: 797 XXXXXXXXXXXGGPRKRTKSTKEGSSASPDGKT---PVIRRRKSTKAAKEKLNETENTPK 853
ST + SS+S +G P +S+ + + T+ +
Sbjct: 753 STEPSTEANESSSTESSQDSTTQESSSSTEGPLSTEPSTEANESSSTESSQDSTTQESSS 812
Query: 854 RRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLG-EEVTQKLYNSFKENQYPN 912
P L+TE S + S S + ++ L E T+ Y S +
Sbjct: 813 SSEGP-LSTESSTEANESSSTESSQDSTTQESSSSTEDPLSTESSTEATYESSSTESSQD 871
Query: 913 RTTKESLAKELGLTFSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVS 972
TT+ES + G ++ E + S + SS+++ S T +P S + + +
Sbjct: 872 STTQESSSSTEGPLSTESST--EGSNESSSTESSQDSTTQESSSSTESPLSTEPST-EAN 928
Query: 973 NCNGAENVQSSKTGVDDTGCMTGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PS 1031
+ E+ Q S T + + G + +T+ +S T +D + +++ P
Sbjct: 929 ESSSTESSQDSTTQ-ESSSSTEGPL--STESSTEANESSSTESSQDSTTQESSSSTEGPL 985
Query: 1032 SKMEVIQGLSANSPKVEVQANGRTRRRRNS 1061
S +G S S E + T+ +S
Sbjct: 986 STESSTEG-SNESSSTESSQDSTTQESSSS 1014
Score = 83 (34.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 49/222 (22%), Positives = 82/222 (36%)
Query: 816 STKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEG 875
ST + SS+S +G P+ ST+++ E NE+ +T + + S SP
Sbjct: 872 STTQESSSSTEG--PL-----STESSTEGSNESSSTESSQDSTTQESSSSTESPL----- 919
Query: 876 CSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFE 935
ST S +S + TQ+ S + P T + A E T S +
Sbjct: 920 -STEPSTEANESSSTESSQDSTTQE---SSSSTEGPLSTESSTEANESSSTESSQDSTTQ 975
Query: 936 NTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTG 995
+ S P S + S + + T S +T S+ + T +++
Sbjct: 976 ESSSSTEGPLSTESSTEGSNESSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTES 1035
Query: 996 DVKNNTQECNSIK--PTSQTSRKRDRDGKSGDQASDPSSKME 1035
+ TQE +S P S S + S ++S S+ E
Sbjct: 1036 SQDSTTQESSSSTEGPLSTESSTEASNESSSTESSQDSTTQE 1077
Score = 83 (34.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 55/243 (22%), Positives = 98/243 (40%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETE-NTPKRRGRPKLNTEDSNI 867
GP T+S+ EGS+ S ++ + + ++ E TE +T +++DS
Sbjct: 983 GPLS-TESSTEGSNESSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTT 1041
Query: 868 SPAKSH-EG-CSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGL 925
+ S EG ST S + +S + ++ T + +S E ++ E + +E
Sbjct: 1042 QESSSSTEGPLSTESSTEASNESSSTESSQDSTTQESSSSTEGPLSTESSTE-VTQEPSP 1100
Query: 926 TFSQVRKWFENTRWSFNHPSSKNAKLA---NSEKGTCTPQSNKNTVGRVSNC---NGAEN 979
T S + T + ++PSS + N + + N N+ S C N ++
Sbjct: 1101 TESLPNSSTQGTPCTTDNPSSLEPSPSTPGNDDDSGNSGSENGNSSTSGSPCTTDNPSDP 1160
Query: 980 VQSSKT-GVDD----TGCMTGDVKNNTQECNSIKPT-----SQTSRKRDRDGKSGDQASD 1029
SS T G DD +G G+ + C + P+ S T D G SG ++
Sbjct: 1161 ESSSSTPGNDDDSGNSGSENGNSSTSGSPCTTDNPSDPESSSSTPGNDDDSGNSGSESGI 1220
Query: 1030 PSS 1032
S+
Sbjct: 1221 TST 1223
Score = 81 (33.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 61/336 (18%), Positives = 106/336 (31%)
Query: 678 LSSEDSEDDEYNPDAPELDDKVTQEXXXXXXXXXXXXXXLAAVLEDNRSSGNDEGAASPL 737
LS+E S + + D TQE A N SS + S
Sbjct: 752 LSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTEPSTEA----NESSSTESSQDSTT 807
Query: 738 GHSNGQRYKDGGXXXXXXXXXXXIIKPGQDGAAPVYGKRSSERLDYKKLYDETYGNVP-- 795
S+ + QD + + L + + TY +
Sbjct: 808 QESSSSSEGPLSTESSTEANESSSTESSQDSTTQESSSSTEDPLSTESSTEATYESSSTE 867
Query: 796 --YXXXXXXXXXXXGGPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETE-NTP 852
GP T+S+ EGS+ S ++ + + ++ E TE +T
Sbjct: 868 SSQDSTTQESSSSTEGPLS-TESSTEGSNESSSTESSQDSTTQESSSSTESPLSTEPSTE 926
Query: 853 KRRGRPKLNTEDSNISPAKSH-EG-CSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQY 910
+++DS + S EG ST S +S + TQ+ +S E
Sbjct: 927 ANESSSTESSQDSTTQESSSSTEGPLSTESSTEANESSSTESSQDSTTQESSSS-TEGPL 985
Query: 911 PNRTTKESLAKELGLTFSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGR 970
++ E + E T S + + S P S +E + + T
Sbjct: 986 STESSTEG-SNESSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQES 1044
Query: 971 VSNCNGAENVQSSKTGVDDTGCMTGDVKNNTQECNS 1006
S+ G + +SS +++ + TQE +S
Sbjct: 1045 SSSTEGPLSTESSTEASNESSSTESSQDSTTQESSS 1080
>UNIPROTKB|F1S218 [details] [associations]
symbol:PBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00390000016426 OMA:NIQSQVD EMBL:CU462949
ProteinModelPortal:F1S218 Ensembl:ENSSSCT00000006939 Uniprot:F1S218
Length = 342
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 146 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 205
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 206 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSL 265
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 266 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 314
>RGD|1308213 [details] [associations]
symbol:Pbx1 "pre-B-cell leukemia homeobox 1" species:10116
"Rattus norvegicus" [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0009887 "organ morphogenesis"
evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA;ISO] [GO:0030278 "regulation of
ossification" evidence=IEA;ISO] [GO:0030325 "adrenal gland
development" evidence=IEA;ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA;ISO] [GO:0035162 "embryonic
hemopoiesis" evidence=IEA;ISO] [GO:0042127 "regulation of cell
proliferation" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048536 "spleen development" evidence=IEA;ISO] [GO:0048538
"thymus development" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=ISO] [GO:0048706 "embryonic skeletal system
development" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1308213
GO:GO:0005737 GO:GO:0030325 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009887
GO:GO:0030326 GO:GO:0048536 GO:GO:0048538 GO:GO:0043433
GO:GO:0009954 GO:GO:0001658 GO:GO:0035162 GO:GO:0048706
GO:GO:0030278 IPI:IPI00566021 ProteinModelPortal:F1M2F5
Ensembl:ENSRNOT00000041201 UCSC:RGD:1308213 ArrayExpress:F1M2F5
Uniprot:F1M2F5
Length = 342
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 146 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 205
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 206 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSL 265
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 266 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 314
>UNIPROTKB|E1BSR7 [details] [associations]
symbol:PBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030278 "regulation of ossification"
evidence=IEA] [GO:0030325 "adrenal gland development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0048538 "thymus
development" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005737
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0043433
GO:GO:0030278 GeneTree:ENSGT00390000016426 EMBL:AADN02034035
EMBL:AADN02034036 EMBL:AADN02034037 EMBL:AADN02034038
EMBL:AADN02034039 EMBL:AADN02034040 EMBL:AADN02034041
EMBL:AADN02034042 EMBL:AADN02034043 EMBL:AADN02034044
EMBL:AADN02034045 EMBL:AADN02034046 EMBL:AADN02034047
EMBL:AADN02034048 EMBL:AADN02034049 EMBL:AADN02034050
EMBL:AADN02034051 EMBL:AADN02034052 EMBL:AADN02034053
EMBL:AADN02034054 IPI:IPI00823223 Ensembl:ENSGALT00000021887
BindingDB:E1BSR7 ArrayExpress:E1BSR7 Uniprot:E1BSR7
Length = 358
Score = 139 (54.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 162 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 221
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 222 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSL 281
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 282 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 330
>UNIPROTKB|J9P997 [details] [associations]
symbol:PBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00390000016426 EMBL:AAEX03018393 EMBL:AAEX03018394
EMBL:AAEX03018395 EMBL:AAEX03018396 EMBL:AAEX03018397
Ensembl:ENSCAFT00000044816 Uniprot:J9P997
Length = 361
Score = 139 (54.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 165 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 224
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 225 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMGVQSL 284
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 285 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 333
>UNIPROTKB|F1NQJ5 [details] [associations]
symbol:PBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030278 "regulation of ossification"
evidence=IEA] [GO:0030325 "adrenal gland development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0048538 "thymus
development" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005737
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0043433
GO:GO:0030278 GeneTree:ENSGT00390000016426 OMA:NIQSQVD
EMBL:AADN02034035 EMBL:AADN02034036 EMBL:AADN02034037
EMBL:AADN02034038 EMBL:AADN02034039 EMBL:AADN02034040
EMBL:AADN02034041 EMBL:AADN02034042 EMBL:AADN02034043
EMBL:AADN02034044 EMBL:AADN02034045 EMBL:AADN02034046
EMBL:AADN02034047 EMBL:AADN02034048 EMBL:AADN02034049
EMBL:AADN02034050 EMBL:AADN02034051 EMBL:AADN02034052
EMBL:AADN02034053 EMBL:AADN02034054 IPI:IPI00586077
Ensembl:ENSGALT00000005425 ArrayExpress:F1NQJ5 Uniprot:F1NQJ5
Length = 367
Score = 139 (54.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 171 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 230
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 231 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSL 290
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 291 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 339
>UNIPROTKB|H0YKN0 [details] [associations]
symbol:PBX1 "Pre-B-cell leukemia transcription factor 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL359255 EMBL:AL357568 EMBL:AL390119 EMBL:AL391001
HGNC:HGNC:8632 ChiTaRS:PBX1 ProteinModelPortal:H0YKN0 SMR:H0YKN0
Ensembl:ENST00000496120 Bgee:H0YKN0 Uniprot:H0YKN0
Length = 370
Score = 139 (54.0 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 174 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 233
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 234 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSL 293
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 294 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 342
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 117 (46.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 842 KEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKL 901
++ L+ E T KR G+ K ++ DS KS S+ R+ RT++ K E++ ++L
Sbjct: 2 RQALSPVE-TEKRSGKRKSDSSDSQEGNYKSEVN-----SKPRKERTAFTK--EQI-REL 52
Query: 902 YNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH-------PSSKNAKLANS 954
F + Y R + +A L LT QV+ WF+N R + +++ +L N
Sbjct: 53 EAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREKELVNV 112
Query: 955 EKGTCTPQSNKNTVG 969
+KGT P S + +G
Sbjct: 113 KKGTLLP-SELSGIG 126
>UNIPROTKB|F1MJ02 [details] [associations]
symbol:PBX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0030325 "adrenal gland development" evidence=IEA] [GO:0030278
"regulation of ossification" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005737
GO:GO:0030325 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009887 GO:GO:0030326
GO:GO:0048536 GO:GO:0048538 GO:GO:0043433 GO:GO:0009954
GO:GO:0001658 GO:GO:0035162 GO:GO:0048706 GO:GO:0030278 KO:K09355
GeneTree:ENSGT00390000016426 CTD:5087 OMA:NIQSQVD EMBL:DAAA02006829
EMBL:DAAA02006830 EMBL:DAAA02006831 EMBL:DAAA02006832
EMBL:DAAA02006833 EMBL:DAAA02006834 EMBL:DAAA02006835
IPI:IPI00687006 RefSeq:NP_001179697.1 UniGene:Bt.78230
ProteinModelPortal:F1MJ02 SMR:F1MJ02 Ensembl:ENSBTAT00000018349
GeneID:540688 KEGG:bta:540688 NextBio:20878774 Uniprot:F1MJ02
Length = 430
Score = 139 (54.0 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 234 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 293
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 294 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSL 353
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 354 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 402
>UNIPROTKB|F1PDM8 [details] [associations]
symbol:PBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0030325 "adrenal gland development" evidence=IEA]
[GO:0030278 "regulation of ossification" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005737
GO:GO:0030325 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009887 GO:GO:0030326
GO:GO:0048536 GO:GO:0048538 GO:GO:0043433 GO:GO:0009954
GO:GO:0001658 GO:GO:0035162 GO:GO:0048706 GO:GO:0030278 KO:K09355
GeneTree:ENSGT00390000016426 CTD:5087 OMA:NIQSQVD EMBL:AAEX03018393
EMBL:AAEX03018394 EMBL:AAEX03018395 EMBL:AAEX03018396
EMBL:AAEX03018397 RefSeq:XP_545786.2 Ensembl:ENSCAFT00000021112
GeneID:488669 KEGG:cfa:488669 Uniprot:F1PDM8
Length = 430
Score = 139 (54.0 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 234 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 293
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 294 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMGVQSL 353
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 354 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 402
>UNIPROTKB|P40424 [details] [associations]
symbol:PBX1 "Pre-B-cell leukemia transcription factor 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0007548 "sex
differentiation" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0030278 "regulation of
ossification" evidence=IEA] [GO:0030325 "adrenal gland development"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR005542 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0006694 GO:GO:0030325 GO:GO:0009952 GO:GO:0003677
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 Orphanet:99860 GO:GO:0009887 GO:GO:0030326
GO:GO:0048536 GO:GO:0048538 GO:GO:0043433 GO:GO:0009954
GO:GO:0007548 GO:GO:0001658 GO:GO:0035162 GO:GO:0048706
GO:GO:0030278 eggNOG:NOG248144 HOGENOM:HOG000266972 KO:K09355
PDB:1PUF PDBsum:1PUF PDB:1B72 PDBsum:1B72 EMBL:M86546 EMBL:AF313404
EMBL:AF313396 EMBL:AF313397 EMBL:AF313398 EMBL:AF313399
EMBL:AF313400 EMBL:AF313401 EMBL:AF313402 EMBL:AF313403
EMBL:AK299673 EMBL:AL359255 EMBL:AL357568 EMBL:AL390119
EMBL:AL391001 EMBL:BC101578 EMBL:M31522 IPI:IPI00028415
IPI:IPI00215683 IPI:IPI01009062 PIR:B34734 RefSeq:NP_001191892.1
RefSeq:NP_002576.1 UniGene:Hs.557097 ProteinModelPortal:P40424
SMR:P40424 IntAct:P40424 STRING:P40424 PhosphoSite:P40424
DMDM:730279 PaxDb:P40424 PRIDE:P40424 DNASU:5087
Ensembl:ENST00000367897 Ensembl:ENST00000401534
Ensembl:ENST00000420696 Ensembl:ENST00000540236 GeneID:5087
KEGG:hsa:5087 UCSC:uc001gct.3 CTD:5087 GeneCards:GC01P164524
HGNC:HGNC:8632 HPA:CAB018768 HPA:HPA003505 HPA:HPA003881 MIM:176310
neXtProt:NX_P40424 PharmGKB:PA32970 HOVERGEN:HBG000122
InParanoid:P40424 OMA:NIQSQVD OrthoDB:EOG45HRXQ PhylomeDB:P40424
BindingDB:P40424 ChEMBL:CHEMBL4587 ChiTaRS:PBX1
EvolutionaryTrace:P40424 GenomeRNAi:5087 NextBio:19618
ArrayExpress:P40424 Bgee:P40424 CleanEx:HS_PBX1 CleanEx:HS_PRL
Genevestigator:P40424 GermOnline:ENSG00000185630 Uniprot:P40424
Length = 430
Score = 139 (54.0 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 234 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 293
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 294 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSL 353
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 354 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 402
>MGI|MGI:97495 [details] [associations]
symbol:Pbx1 "pre B cell leukemia homeobox 1" species:10090
"Mus musculus" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001655 "urogenital system development"
evidence=IMP] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0009887 "organ
morphogenesis" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009954 "proximal/distal
pattern formation" evidence=IGI;IMP] [GO:0010971 "positive
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030278
"regulation of ossification" evidence=IMP] [GO:0030325 "adrenal
gland development" evidence=IMP] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IGI;IDA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IGI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0048536 "spleen
development" evidence=IGI;IMP] [GO:0048538 "thymus development"
evidence=IMP] [GO:0048568 "embryonic organ development"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:97495
GO:GO:0005737 GO:GO:0006694 GO:GO:0030325 GO:GO:0009952
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0009887 GO:GO:0030326 GO:GO:0048536
GO:GO:0048538 GO:GO:0043433 GO:GO:0009954 GO:GO:0007548
GO:GO:0001658 GO:GO:0035162 GO:GO:0048706 GO:GO:0030278
eggNOG:NOG248144 HOGENOM:HOG000266972 KO:K09355
GeneTree:ENSGT00390000016426 CTD:5087 HOVERGEN:HBG000122
OMA:NIQSQVD OrthoDB:EOG45HRXQ ChiTaRS:PBX1 EMBL:L27453
EMBL:AF020196 EMBL:BC058390 IPI:IPI00115998 IPI:IPI00230237
PIR:A54863 RefSeq:NP_032809.1 RefSeq:NP_899198.1 UniGene:Mm.43358
UniGene:Mm.440114 PDB:1DU6 PDB:1LFU PDBsum:1DU6 PDBsum:1LFU
ProteinModelPortal:P41778 SMR:P41778 DIP:DIP-6107N MINT:MINT-96519
STRING:P41778 PhosphoSite:P41778 PaxDb:P41778 PRIDE:P41778
Ensembl:ENSMUST00000072863 Ensembl:ENSMUST00000176540
Ensembl:ENSMUST00000176790 GeneID:18514 KEGG:mmu:18514
UCSC:uc007dle.1 InParanoid:P41778 BindingDB:P41778
EvolutionaryTrace:P41778 NextBio:294252 Bgee:P41778 CleanEx:MM_PBX1
Genevestigator:P41778 GermOnline:ENSMUSG00000052534 Uniprot:P41778
Length = 430
Score = 139 (54.0 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 234 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 293
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENV--QSSKTGVDDTG-------CM 993
K + AN T +N + G +N N SS + ++G +
Sbjct: 294 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSL 353
Query: 994 TGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASD-PSSKMEVIQGLSAN 1043
GD Q +++ SQ R ++G + +S+M QG+SAN
Sbjct: 354 NGDSYQGAQVGANVQ--SQVDTLRHVISQTGGYSDGLAASQMYSPQGISAN 402
>UNIPROTKB|B7Z774 [details] [associations]
symbol:PBX1 "Pre-B-cell leukemia transcription factor 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL359255 EMBL:AL357568 EMBL:AL390119 EMBL:AL391001
UniGene:Hs.557097 HGNC:HGNC:8632 HOVERGEN:HBG000122 ChiTaRS:PBX1
EMBL:AK301540 IPI:IPI01009674 SMR:B7Z774 STRING:B7Z774
Ensembl:ENST00000540246 UCSC:uc010pkw.1 Uniprot:B7Z774
Length = 301
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/123 (29%), Positives = 55/123 (44%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 129 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 188
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKNNTQ 1002
K + AN T +N + G +N N S + + + +GD+ + Q
Sbjct: 189 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSN--SGDLFMSVQ 246
Query: 1003 ECN 1005
N
Sbjct: 247 SLN 249
>UNIPROTKB|Q96T23 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0050434
"positive regulation of viral transcription" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006334 "nucleosome assembly" evidence=IDA;TAS]
[GO:0042393 "histone binding" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0043392 "negative regulation of DNA
binding" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 Reactome:REACT_115566
GO:GO:0045893 GO:GO:0005654 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 EMBL:AP000580 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0042393 GO:GO:0034080 GO:GO:0016584
PROSITE:PS50827 GO:GO:0050434 GO:GO:0043392 eggNOG:NOG79337
GO:GO:0031213 EMBL:AF380176 EMBL:AF227948 EMBL:AP000609
EMBL:AP002343 EMBL:AF059317 EMBL:BC046124 EMBL:AK001268
IPI:IPI00290652 IPI:IPI00514411 IPI:IPI00982445 RefSeq:NP_057662.3
UniGene:Hs.420229 ProteinModelPortal:Q96T23 SMR:Q96T23
IntAct:Q96T23 STRING:Q96T23 PhosphoSite:Q96T23 DMDM:251757329
PaxDb:Q96T23 PRIDE:Q96T23 DNASU:51773 Ensembl:ENST00000308488
Ensembl:ENST00000360355 Ensembl:ENST00000480887 GeneID:51773
KEGG:hsa:51773 UCSC:uc001oym.3 CTD:51773 GeneCards:GC11M077371
H-InvDB:HIX0022742 HGNC:HGNC:18118 HPA:CAB022626 MIM:608522
neXtProt:NX_Q96T23 PharmGKB:PA29210 HOGENOM:HOG000154205
HOVERGEN:HBG105728 InParanoid:Q96T23 KO:K11657 OMA:QPRVLPS
OrthoDB:EOG441QBQ PhylomeDB:Q96T23 ChiTaRS:RSF1 GenomeRNAi:51773
NextBio:55899 Bgee:Q96T23 CleanEx:HS_RSF1 Genevestigator:Q96T23
GermOnline:ENSG00000048649 Uniprot:Q96T23
Length = 1441
Score = 137 (53.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 32/76 (42%), Positives = 41/76 (53%)
Query: 517 EGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
E + +D C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP
Sbjct: 884 EAILADDDEPCKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCP 936
Query: 577 GCDCKVDCIDLVNELQ 592
C K+ C L +LQ
Sbjct: 937 PCQHKLLCEKLEEQLQ 952
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 53/234 (22%), Positives = 89/234 (38%)
Query: 833 RRRKSTKAAKEKLN-----ETENTPK--RRGRPKLNTEDSNISPAKSHEGCSTPGSR--- 882
RRR+S + K ++N E++ + K RRG+ +S ++S E + S
Sbjct: 1203 RRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYLSKNSEDDE 1262
Query: 883 -GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
+ + S RK G + Y+ E + K S K L + + +N
Sbjct: 1263 LAKESKRSVRKRGRSTDE--YSEADEEE-EEEEGKPS-RKRLHRIETDEEESCDNAHGDA 1318
Query: 942 NHPS--SKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTGVD----DTGCMTG 995
N P+ S+ L + ++ T P ++ ENV + +D D G
Sbjct: 1319 NQPARDSQPRVLPSEQESTKKPYRIES-----DEEEDFENVGKVGSPLDYSLVDLPSTNG 1373
Query: 996 DVKNNTQECNSI-KPTSQTSRKRDRDGKSGDQASDPSSKMEVIQGLSANSPKVE 1048
E N I KPT ++ +D S AS+ +S G A +P+ E
Sbjct: 1374 QSPGKAIE-NLIGKPTEKSQTPKDNSTASASLASNGTSG-----GQEAGAPEEE 1421
Score = 56 (24.8 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 819 EGSSASPDGKTPVIRRRKST---KAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEG 875
E + + K V +R +ST A E+ E E P R+ ++ T++ S +H
Sbjct: 1259 EDDELAKESKRSVRKRGRSTDEYSEADEEEEEEEGKPSRKRLHRIETDEEE-SCDNAHGD 1317
Query: 876 CSTPGSRGRRHRTSYRKLGEEVTQKLYN--SFKENQYPN 912
+ P +R + R + +E T+K Y S +E + N
Sbjct: 1318 ANQP-ARDSQPRVLPSE--QESTKKPYRIESDEEEDFEN 1353
Score = 51 (23.0 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRP-KLNTEDSNISPAKSHEGCSTPGS-- 881
PD ++K +K +K L E +T R+ + + D I A + G
Sbjct: 987 PDFSEDQEEKKKDSKKSKANLLERRSTRTRKCISYRFDEFDEAIDEAIEDDIKEADGGGV 1046
Query: 882 -RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNR 913
RG+ T G++++ L KEN+ P R
Sbjct: 1047 GRGKDISTITGHRGKDISTILDEERKENKRPQR 1079
Score = 49 (22.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 25/113 (22%), Positives = 45/113 (39%)
Query: 38 ECIHSEPLESKSLLGSEAVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPS------ 91
E + LES+ EA E P I + EKL A +V + T + S
Sbjct: 608 EEVPKSTLESEKPGSPEAAETSPPSNIIDHCEKL-ASEKEVVECQSTSTVGGQSVKKVDL 666
Query: 92 EDMRKSTQTNKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDKPQATS 144
E +++ ++ K + ++ E + S QK + Y++V ++ S
Sbjct: 667 ETLKEDSEFTKVEMDNLDNAQTSGIEEPSETKGSMQKSKFKYKLVPEEETTAS 719
Score = 45 (20.9 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 38 ECIHSEPLESKSLLGSEAVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPSE--DMR 95
EC+ K+ L +A P +P S L++ + P S +PPS D
Sbjct: 583 ECLEKLEKSKKTFLDKDAQRLSPIPEEVPKST-LES---EKPGSPEAAETSPPSNIIDHC 638
Query: 96 KSTQTNKASCSQQNTS 111
+ + K Q+TS
Sbjct: 639 EKLASEKEVVECQSTS 654
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 135 (52.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 521 DSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP C
Sbjct: 175 EEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCPEC 226
Score = 62 (26.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 39/183 (21%), Positives = 72/183 (39%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISP 869
PR++ K S+S + R R K AK+K E P G + + + SP
Sbjct: 1038 PRRQRSKAKSRRSSSDRSSS---RERAKRKKAKDKSREHRRGPW--GHSRRTSRSRSGSP 1092
Query: 870 -AKSHEGCSTPGSRGRRHRTSYRKLGEEV--TQKLYNSFKENQYPNRTTKESLAKELGLT 926
+ S+E + + ++ R++ R G E T L + R+ + KE +
Sbjct: 1093 GSSSYEHYES--RKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERSHERPDRKE-SVA 1149
Query: 927 FSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTG 986
+ + R+ + S H + ++ + + EK T + G V + A Q + G
Sbjct: 1150 WPRDRRKRRSRSPSSEHRAREHRRPRSREKWPQTRSHSPERKGAVREASPAPLAQG-EPG 1208
Query: 987 VDD 989
+D
Sbjct: 1209 RED 1211
Score = 53 (23.7 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTE 863
P +R + T+ KTP KS +A KRRG+ K+ +E
Sbjct: 330 PARRKRKTRRRKKVPGRKKTPSGPSAKSKSSATRSKKRQHRVKKRRGK-KVKSE 382
Score = 53 (23.7 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 29/92 (31%), Positives = 37/92 (40%)
Query: 975 NGAENVQSSKTGVDDTGCMTGDV---KNNTQECNSIKPTSQT-SRKRDRDGKSGDQASDP 1030
N A + Q S G +T D K N SIK T Q S D +G +S P
Sbjct: 780 NMAHSSQLSSPGFCNTFRPVDDKEQRKENPSPLFSIKKTKQLRSEVYDPSDPTGSDSSAP 839
Query: 1031 SSK----------MEVIQGLSANSPKVE-VQA 1051
S E+ + +S NSPK + VQA
Sbjct: 840 GSSPERSGPGLLPSEITRTISINSPKAQTVQA 871
Score = 50 (22.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAA-KEKLNETENTP--KRRGRPKLNTEDS 865
G +RT ++ GS S + R++K ++A + + E T +R R K E S
Sbjct: 1079 GHSRRTSRSRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERS 1138
Query: 866 NISPAKSHEGCSTPGSRGRRHRTS 889
+ P + E + P R RR R S
Sbjct: 1139 HERPDRK-ESVAWP--RDRRKRRS 1159
Score = 50 (22.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 809 GPRKRTKSTKEGSSASPD-GKTPVIRRR---KSTKAAKEKLNETENTPKRRGRPKLNTED 864
G R ++ + SASP G+ R+R KS +++ ++ + E +++ + K
Sbjct: 1016 GTRSESRD-RSSRSASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSREHR 1074
Query: 865 SNI---SPAKSHEGCSTPGSRGRRHRTSYRK 892
S S +PGS H S +K
Sbjct: 1075 RGPWGHSRRTSRSRSGSPGSSSYEHYESRKK 1105
Score = 45 (20.9 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRT 888
T V +R + + + +T K GR K + S AKS S S+ R+HR
Sbjct: 318 TAVYQRPLTPRTPARRKRKTRRRKKVPGRKKTPSGPS----AKSKS--SATRSKKRQHRV 371
Query: 889 SYRKLGEEV 897
R+ G++V
Sbjct: 372 KKRR-GKKV 379
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 135 (52.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 521 DSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP C
Sbjct: 178 EEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCPEC 229
Score = 62 (26.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 39/183 (21%), Positives = 72/183 (39%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISP 869
PR++ K S+S + R R K AK+K E P G + + + SP
Sbjct: 1040 PRRQRSKAKSRRSSSDRSSS---RERAKRKKAKDKSREHRRGPW--GHSRRTSRSRSGSP 1094
Query: 870 -AKSHEGCSTPGSRGRRHRTSYRKLGEEV--TQKLYNSFKENQYPNRTTKESLAKELGLT 926
+ S+E + + ++ R++ R G E T L + R+ + KE +
Sbjct: 1095 GSSSYEHYES--RKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERSHERPDRKE-SVA 1151
Query: 927 FSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTG 986
+ + R+ + S H + ++ + + EK T + G V + A Q + G
Sbjct: 1152 WPRDRRKRRSRSPSSEHRAREHRRPRSREKWPQTRSHSPERKGAVREASPAPLAQG-EPG 1210
Query: 987 VDD 989
+D
Sbjct: 1211 RED 1213
Score = 53 (23.7 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTE 863
P +R + T+ KTP KS +A KRRG+ K+ +E
Sbjct: 333 PARRKRKTRRRKKVPGRKKTPSGPSAKSKSSATRSKKRQHRVKKRRGK-KVKSE 385
Score = 53 (23.7 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 29/92 (31%), Positives = 37/92 (40%)
Query: 975 NGAENVQSSKTGVDDTGCMTGDV---KNNTQECNSIKPTSQT-SRKRDRDGKSGDQASDP 1030
N A + Q S G +T D K N SIK T Q S D +G +S P
Sbjct: 782 NMAHSSQLSSPGFCNTFRPVDDKEQRKENPSPLFSIKKTKQLRSEVYDPSDPTGSDSSAP 841
Query: 1031 SSK----------MEVIQGLSANSPKVE-VQA 1051
S E+ + +S NSPK + VQA
Sbjct: 842 GSSPERSGPGLLPSEITRTISINSPKAQTVQA 873
Score = 50 (22.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAA-KEKLNETENTP--KRRGRPKLNTEDS 865
G +RT ++ GS S + R++K ++A + + E T +R R K E S
Sbjct: 1081 GHSRRTSRSRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERS 1140
Query: 866 NISPAKSHEGCSTPGSRGRRHRTS 889
+ P + E + P R RR R S
Sbjct: 1141 HERPDRK-ESVAWP--RDRRKRRS 1161
Score = 50 (22.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 809 GPRKRTKSTKEGSSASPD-GKTPVIRRR---KSTKAAKEKLNETENTPKRRGRPKLNTED 864
G R ++ + SASP G+ R+R KS +++ ++ + E +++ + K
Sbjct: 1018 GTRSESRD-RSSRSASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSREHR 1076
Query: 865 SNI---SPAKSHEGCSTPGSRGRRHRTSYRK 892
S S +PGS H S +K
Sbjct: 1077 RGPWGHSRRTSRSRSGSPGSSSYEHYESRKK 1107
Score = 45 (20.9 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRT 888
T V +R + + + +T K GR K + S AKS S S+ R+HR
Sbjct: 321 TAVYQRPLTPRTPARRKRKTRRRKKVPGRKKTPSGPS----AKSKS--SATRSKKRQHRV 374
Query: 889 SYRKLGEEV 897
R+ G++V
Sbjct: 375 KKRR-GKKV 382
>ZFIN|ZDB-GENE-010328-16 [details] [associations]
symbol:baz1b "bromodomain adjacent to zinc finger
domain, 1B" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004715 "non-membrane spanning protein
tyrosine kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA;ISS] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA;ISS] [GO:0016572 "histone
phosphorylation" evidence=ISS] [GO:0035173 "histone kinase
activity" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 ZFIN:ZDB-GENE-010328-16 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF10537 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 EMBL:BX950182
EMBL:CU326349 IPI:IPI00998609 Ensembl:ENSDART00000128582
Uniprot:E7EYG7
Length = 1802
Score = 115 (45.5 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 34/119 (28%), Positives = 58/119 (48%)
Query: 465 GWKGLSVEKLKPEKELQ---RATSEILRRKLKIRDL--FQRLDSLCAGGFPKSLFDSEGQ 519
G + + E++ +K+L R + + + K +R+ F R+ L G + +
Sbjct: 1142 GEESTTAEEVDDQKKLAEEARVATAVEKWKTAVREAQTFSRMHVLL--GMLDACI--KWD 1197
Query: 520 IDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ +E+ C C K D+ +ILCD C++ FH +CL P L + IP + WLCP C
Sbjct: 1198 MSAENARCKVCRRK--GEDDKLILCD-ECNKAFHLFCLRPALYR--IPAGE--WLCPAC 1249
Score = 93 (37.8 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 45/251 (17%), Positives = 97/251 (38%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
RKR + + S + + +++K+ K K+ ++ + RR K N +DS
Sbjct: 1482 RKRAATPSDNSDDDDEEEDERSKKQKNGKQGKKASSKRKVDNSRRKNTKRNKDDSESEED 1541
Query: 871 KSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQV 930
+ + R R+ R + +K NS ++N N+ ES +E +
Sbjct: 1542 EDEDDEEEDDERSRKQRNGKQSKKASSRRKEDNSRRKNTKRNKDDSESEEEEDDDEEDEE 1601
Query: 931 RKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDT 990
+ E+ S + K K +S K + Q N S + + + ++
Sbjct: 1602 EE--EDDEGSKKQKNGKQDKKNSSRKKGNSRQRNTKRNKDESEDDEDDEEEEERSKKQKN 1659
Query: 991 GCMTGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASDPSSKMEVIQGLSANSPKVEVQ 1050
G + + +E NS + ++ + K D + + D + KM+ + + + + Q
Sbjct: 1660 GKRSKKASSRRKEDNSRRKNTKRN-KDDSESEEDDDEEEEDEKMKKQKNRKQTTNRRK-Q 1717
Query: 1051 ANGRTRRRRNS 1061
N R ++ + +
Sbjct: 1718 DNSRQKKTKQN 1728
Score = 75 (31.5 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 63/253 (24%), Positives = 104/253 (41%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNIS 868
G R++ + SS S K P + S A+K N ++ +PK +PK S S
Sbjct: 1294 GHSLRSRKKVKTSSKSKMQKKPA--KPASRSASKTDTNPSKTSPKSSAKPKSRAAPS--S 1349
Query: 869 PAKSHE---GCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNR---TTKES---- 918
P E S P SR + +K EE+ QK+ F+ + +P R + +E+
Sbjct: 1350 PVDIDELVRQSSKPPSR--KKDVELQKC-EEILQKIMK-FRHS-WPFREPVSAEEAEDYQ 1404
Query: 919 --LAKELGLTFSQVRKWFENTRWSFNHPSSKNAKL--ANSEKGTCTPQSNKNT-VGRVSN 973
+ + LT Q + F+++ + ++ KL +N+E+ P SN T + R
Sbjct: 1405 DVITSPMDLTTMQGK--FKSSEYHSASDFIEDMKLIFSNAEEYN-QPSSNVLTCMSRTEE 1461
Query: 974 CNGAENVQSSKTGVDDTGCMTGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASDPSSK 1033
E +Q S GV T + T NS + +R + K+G Q SSK
Sbjct: 1462 AF-VELLQKSLPGVSYLRRRTRK-RAATPSDNS-DDDDEEEDERSKKQKNGKQGKKASSK 1518
Query: 1034 MEVIQGLSANSPK 1046
+V N+ +
Sbjct: 1519 RKVDNSRRKNTKR 1531
Score = 45 (20.9 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 22/102 (21%), Positives = 42/102 (41%)
Query: 104 SCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDKPQATSLVDNATLQPVSKDVSKS-- 161
+C +S+ H ++ + Q Y + F+KP +V + T+ P+ K V +
Sbjct: 55 TCKSTGSSQLTHKEAWEEEQEVTELLQEEYPVWFEKP-VLEIVHHNTV-PLDKLVDQVWV 112
Query: 162 ---SQTGNRQALDFLSGNRCNELDVDCVHSEPLNQKHQLGSE 200
++ + D + GN L V+ V PL + +E
Sbjct: 113 EILTKYAVGEKCDLMVGND-KTLSVEVVKIHPLENPPEENAE 153
Score = 39 (18.8 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 681 EDSEDDEYNPDAPELDDKVTQE 702
EDSE++E D+ E D++ ++E
Sbjct: 1265 EDSEEEE---DSEEEDEEESEE 1283
Score = 39 (18.8 bits), Expect = 6.3e-05, Sum P(4) = 6.3e-05
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 81 SSFTDHLAPPSEDMRKSTQTNKASCSQQNTSEQK 114
S F+D L P + + ++ T + S S +K
Sbjct: 287 SKFSDFLLDPHKFLAENPSTKRKSLSSPEGKPRK 320
>ZFIN|ZDB-GENE-040426-2039 [details] [associations]
symbol:uhrf1 "ubiquitin-like, containing PHD and
RING finger domains, 1" species:7955 "Danio rerio" [GO:0042393
"histone binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0002088 "lens development in camera-type eye"
evidence=IMP] [GO:0031100 "organ regeneration" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS;IMP]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0000790 "nuclear
chromatin" evidence=ISS] [GO:0000791 "euchromatin" evidence=ISS]
[GO:0000792 "heterochromatin" evidence=ISS] [GO:0044729
"hemi-methylated DNA-binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00299 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2039 GO:GO:0005737 GO:GO:0046872 GO:GO:0031100
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0002088
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY648713 EMBL:BX927276 EMBL:FP360035 EMBL:BC058055
IPI:IPI00497177 RefSeq:NP_998242.1 RefSeq:XP_003201004.1
UniGene:Dr.77703 PRIDE:E7EZF3 Ensembl:ENSDART00000012551
Ensembl:ENSDART00000121555 Ensembl:ENSDART00000122573
Ensembl:ENSDART00000126951 GeneID:100538017 GeneID:406350
KEGG:dre:100538017 KEGG:dre:406350 NextBio:20817968
ArrayExpress:E7EZF3 Bgee:E7EZF3 Uniprot:E7EZF3
Length = 776
Score = 137 (53.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 37/96 (38%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K D + LCD CD FH YCL PPL PDDE W CP DC+ D +
Sbjct: 316 CHVCGIKQ-DPDKQL-LCD-ECDMAFHTYCLNPPLTTI---PDDEDWYCP--DCRNDASE 367
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V L G +L + K+ A++ +D G+A
Sbjct: 368 VV--LAGEKLKESKKKAKM-ASASSSSQRDWGKGMA 400
Score = 52 (23.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 818 KEGSSASPDGKTPVI-RRRKSTKAAKEKLNETENTPKR 854
KE + +TP +R++ +++ +EK + T+ TPK+
Sbjct: 620 KENKNEDDIEETPTKGKRKRKSQSMEEKSSPTKGTPKK 657
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEK 844
G RKR + E S SP TP + ++ K +KE+
Sbjct: 635 GKRKRKSQSMEEKS-SPTKGTPKKMKVEAYKLSKEQ 669
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTP-KRRGRPKLNTEDSNISPAK 871
P+G + ++ K K + ++ E TP K + + K + + SP K
Sbjct: 606 PEGYLEAVAAKEKEKENKNE-DDIEETPTKGKRKRKSQSMEEKSSPTK 652
>UNIPROTKB|J9NTV3 [details] [associations]
symbol:GSC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAEX03014876
EMBL:AAEX03014875 Ensembl:ENSCAFT00000044353
GeneTree:ENSGT00700000105407 Uniprot:J9NTV3
Length = 158
Score = 115 (45.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 32/85 (37%), Positives = 42/85 (49%)
Query: 875 GCSTPGS--RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRK 932
G PG R RRHRT + EE Q L F +NQYP+ T+E LA + L +V
Sbjct: 70 GAGGPGPQRRTRRHRTIF---SEEQLQALEALFVQNQYPDVGTRERLAGRIRLREERVEV 126
Query: 933 WFENTRWSFNHPS-SKNAKLANSEK 956
WF+N R + H S ++L K
Sbjct: 127 WFKNRRAKWRHQKRSATSRLLPGAK 151
>UNIPROTKB|F1PUR9 [details] [associations]
symbol:DUXA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 OMA:PGYATKQ
EMBL:AAEX03000701 Ensembl:ENSCAFT00000003829
GeneTree:ENSGT00610000085975 Uniprot:F1PUR9
Length = 163
Score = 117 (46.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/80 (36%), Positives = 39/80 (48%)
Query: 863 EDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKE 922
ED S + + P RR RTSY L +F N YP T+E LAKE
Sbjct: 80 EDLESSQDQDYPEEEIPSREDRRCRTSYTS---SQLHTLIEAFTNNPYPGIDTREQLAKE 136
Query: 923 LGLTFSQVRKWFENTRWSFN 942
+G+ S+V+ WF+N R F+
Sbjct: 137 IGIPESRVQIWFQNRRSRFH 156
>UNIPROTKB|G3MZU0 [details] [associations]
symbol:GSC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104273 EMBL:DAAA02045756 EMBL:DAAA02045757
Ensembl:ENSBTAT00000065062 OMA:KPPRESC Uniprot:G3MZU0
Length = 169
Score = 119 (46.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 870 AKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQ 929
A+ G P R RRHRT + EE + L F +NQYP+ T+E LA + L +
Sbjct: 77 AQPGAGVQGPPRRTRRHRTIF---SEEQLRALEALFMQNQYPDVGTRERLAGRIRLREER 133
Query: 930 VRKWFENTR--WSFNHPSSKNAKLANSEK 956
V WF+N R W ++ +A+L + K
Sbjct: 134 VEVWFKNRRAKWRHQKRAAASARLLSGPK 162
>UNIPROTKB|O13004 [details] [associations]
symbol:GSC2 "Goosecoid 2" species:9031 "Gallus gallus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
eggNOG:NOG244876 HOGENOM:HOG000112823 OrthoDB:EOG4RFKV2
GeneTree:ENSGT00700000104273 EMBL:AADN02043256 EMBL:Y09850
IPI:IPI00821873 Ensembl:ENSGALT00000038540 InParanoid:O13004
Uniprot:O13004
Length = 61
Score = 111 (44.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RRHRT + EE Q L F +NQYP+ T+E LA + L +V WF+N R + H
Sbjct: 2 RRHRTIFT---EEQLQALETLFHQNQYPDVITREHLANRIHLKEERVEVWFKNRRAKWRH 58
>ZFIN|ZDB-GENE-000823-7 [details] [associations]
symbol:hoxb6b "homeo box B6b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-7 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
HOVERGEN:HBG016849 eggNOG:NOG305812 EMBL:AL645798 OrthoDB:EOG4G7C0G
EMBL:AF071254 EMBL:DQ060548 EMBL:Y14532 IPI:IPI00481961
UniGene:Dr.59927 ProteinModelPortal:Q9YGT4 SMR:Q9YGT4 STRING:Q9YGT4
InParanoid:Q9YGT4 ArrayExpress:Q9YGT4 Uniprot:Q9YGT4
Length = 224
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 58/209 (27%), Positives = 90/209 (43%)
Query: 768 GAAPVYGKRSSERLDYKKLYDE-TYG--NVPYXXXXXXXXXXXGGPRKRTKSTKEGSSAS 824
G P+Y SS D + Y T+G NV GG R+ GS+++
Sbjct: 23 GQIPLY---SSGYTDSLRHYPSATFGATNVQDKVYTSSYYQQAGGVFGRS-----GSTSA 74
Query: 825 PDGKTPVIRRRKSTKAAKEKLNE----TENTPK----RRGRPK-LNTEDSNISPA----K 871
D TP I R A L + T++ K +G + +TED +P +
Sbjct: 75 CDYSTPNIYRTADRSCAIGSLEDSLVLTQDQCKTDCTEQGTERYFSTEDKPCTPVYPWMQ 134
Query: 872 SHEGCS-TPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQV 930
C+ PGS GRR R +Y + T +L F N+Y R + ++ L LT Q+
Sbjct: 135 RMNSCNGMPGSTGRRGRQTYTRFQ---TLELEKEFHFNRYLTRRRRIEISHALCLTERQI 191
Query: 931 RKWFENTR--WSFNHPSSKNAKLANSEKG 957
+ WF+N R W + + +AK+++ E G
Sbjct: 192 KIWFQNRRMKWKKENKAVNSAKVSDEEDG 220
>UNIPROTKB|O75360 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048850 "hypophysis morphogenesis" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0060126 "somatotropin secreting cell differentiation"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043066
GO:GO:0016477 GO:GO:0045944 GO:GO:0007417 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0001568 GO:GO:0009953 GO:GO:0000976
GO:GO:0060070 Orphanet:95494 MIM:262600 Orphanet:226307
GO:GO:0021979 GO:GO:0060126 CTD:5626 eggNOG:NOG293463
HOGENOM:HOG000115706 HOVERGEN:HBG053691 KO:K09327 OrthoDB:EOG4BZN3X
GO:GO:0048850 OMA:TCFPHPY EMBL:AF076214 EMBL:AF076215 EMBL:AF041141
EMBL:AF041139 EMBL:AF041140 EMBL:AC136940 EMBL:BC069076
IPI:IPI00025308 RefSeq:NP_006252.3 UniGene:Hs.158301
ProteinModelPortal:O75360 SMR:O75360 STRING:O75360
PhosphoSite:O75360 PRIDE:O75360 Ensembl:ENST00000308304 GeneID:5626
KEGG:hsa:5626 UCSC:uc003mif.1 GeneCards:GC05M177419 HGNC:HGNC:9455
MIM:601538 neXtProt:NX_O75360 Orphanet:90695 PharmGKB:PA33808
InParanoid:O75360 PhylomeDB:O75360 GenomeRNAi:5626 NextBio:21868
Bgee:O75360 CleanEx:HS_PROP1 Genevestigator:O75360
GermOnline:ENSG00000175325 Uniprot:O75360
Length = 226
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 39/119 (32%), Positives = 63/119 (52%)
Query: 833 RRRKSTKAAKEKLNETENTPKRR---GRPKLNTEDSNISPAKSHEGCS------TP--GS 881
RRR++ K K ++ + P+R G P T DS+ P + G +P G
Sbjct: 5 RRRQAEKPKKGRVG-SNLLPERHPATGTPT-TTVDSSAPPCRRLPGAGGGRSRFSPQGGQ 62
Query: 882 RGRRH-RTSYRKLGEEVT-QKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR 938
RGR H R +R V ++L ++F NQYP+ +ESLA++ GL+ ++++ WF+N R
Sbjct: 63 RGRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRR 121
>RGD|708360 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10116
"Rattus norvegicus" [GO:0006366 "transcription from RNA polymerase
II promoter" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IMP]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 RGD:708360 Prosite:PS00518
GO:GO:0019904 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 139 (54.0 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 515 DSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWL 574
D E + + + +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W
Sbjct: 180 DEEAE-EEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WF 231
Query: 575 CPGCDCKVDCID 586
CP +C V +D
Sbjct: 232 CP--ECAVPGVD 241
Score = 66 (28.3 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
R+ + S G SP RR K + ++E++++ E+ + R R + + SP+
Sbjct: 1122 RRHSGSRSRGRDGSPHSSLERDRRHKHRERSRERMDKKESMTRSRERRRWRSR----SPS 1177
Query: 871 KSHEGCSTPGSRGRRHRTSYRKLG 894
H P SR +H S K G
Sbjct: 1178 VEHR-TRRPHSR-EKHPHSPEKKG 1199
Score = 52 (23.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 21/73 (28%), Positives = 30/73 (41%)
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRR-HR 887
T V +R + + ++ + K GR K + S KS G + R R R
Sbjct: 327 TAVYQRPLTPRVPAKRKRKAGRRKKVLGRKKTRSRSS----VKSKSGGTRAKKRQHRVRR 382
Query: 888 TSYRKLGEEVTQK 900
T RKL EVT +
Sbjct: 383 TKGRKLKNEVTAR 395
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 1010 TSQTSRKRDRDGKSGDQASDPSSKMEVIQGLSANSPKVEVQANGRTRRRRN 1060
+S S RDR +S ++ +K + S S + R +RR++
Sbjct: 1031 SSTRSGSRDRTSRSVSPFTEEHTKRHRAKTKSRRSSSDRASSQDRAKRRKD 1081
Score = 41 (19.5 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 19/60 (31%), Positives = 24/60 (40%)
Query: 998 KNNTQECNSIK-PTSQTSRKRDRDGKSGDQASDPSSK----------MEVIQGLSANSPK 1046
K N SIK P S D +G +S PSS E+ + +S NSPK
Sbjct: 813 KENPSPLFSIKKPKQLKSEIYDPFDPTGSDSSPPSSSPESLGSGLLPSEITRTISINSPK 872
Score = 37 (18.1 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 9/48 (18%), Positives = 21/48 (43%)
Query: 971 VSNCNGAENVQSSKTGVDDTGCMTGDVKNNTQECNSIKPTSQTSRKRD 1018
+++C A+N+ T + NN++E + T+ K++
Sbjct: 1547 LASCGAAQNLAPVPTMPATASELAVPTTNNSEERTATPKTAAEKTKKE 1594
>UNIPROTKB|Q63625 [details] [associations]
symbol:Phrf1 "PHD and RING finger domain-containing protein
1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 RGD:708360
Prosite:PS00518 GO:GO:0019904 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 139 (54.0 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 515 DSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWL 574
D E + + + +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W
Sbjct: 180 DEEAE-EEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WF 231
Query: 575 CPGCDCKVDCID 586
CP +C V +D
Sbjct: 232 CP--ECAVPGVD 241
Score = 66 (28.3 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
R+ + S G SP RR K + ++E++++ E+ + R R + + SP+
Sbjct: 1122 RRHSGSRSRGRDGSPHSSLERDRRHKHRERSRERMDKKESMTRSRERRRWRSR----SPS 1177
Query: 871 KSHEGCSTPGSRGRRHRTSYRKLG 894
H P SR +H S K G
Sbjct: 1178 VEHR-TRRPHSR-EKHPHSPEKKG 1199
Score = 52 (23.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 21/73 (28%), Positives = 30/73 (41%)
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRR-HR 887
T V +R + + ++ + K GR K + S KS G + R R R
Sbjct: 327 TAVYQRPLTPRVPAKRKRKAGRRKKVLGRKKTRSRSS----VKSKSGGTRAKKRQHRVRR 382
Query: 888 TSYRKLGEEVTQK 900
T RKL EVT +
Sbjct: 383 TKGRKLKNEVTAR 395
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 1010 TSQTSRKRDRDGKSGDQASDPSSKMEVIQGLSANSPKVEVQANGRTRRRRN 1060
+S S RDR +S ++ +K + S S + R +RR++
Sbjct: 1031 SSTRSGSRDRTSRSVSPFTEEHTKRHRAKTKSRRSSSDRASSQDRAKRRKD 1081
Score = 41 (19.5 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 19/60 (31%), Positives = 24/60 (40%)
Query: 998 KNNTQECNSIK-PTSQTSRKRDRDGKSGDQASDPSSK----------MEVIQGLSANSPK 1046
K N SIK P S D +G +S PSS E+ + +S NSPK
Sbjct: 813 KENPSPLFSIKKPKQLKSEIYDPFDPTGSDSSPPSSSPESLGSGLLPSEITRTISINSPK 872
Score = 37 (18.1 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 9/48 (18%), Positives = 21/48 (43%)
Query: 971 VSNCNGAENVQSSKTGVDDTGCMTGDVKNNTQECNSIKPTSQTSRKRD 1018
+++C A+N+ T + NN++E + T+ K++
Sbjct: 1547 LASCGAAQNLAPVPTMPATASELAVPTTNNSEERTATPKTAAEKTKKE 1594
>ZFIN|ZDB-GENE-030131-624 [details] [associations]
symbol:phrf1 "PHD and ring finger domains 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518
ZFIN:ZDB-GENE-030131-624 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 GeneTree:ENSGT00530000063661 EMBL:AL928892
Ensembl:ENSDART00000150719 Bgee:H0WEE0 Uniprot:H0WEE0
Length = 1670
Score = 131 (51.2 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 515 DSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWL 574
+ + ++D + C CG +D ++ ++LCDG CD G+H CL PPL D P +E W
Sbjct: 173 EEQVEVDLDQTSCEICGGRD--REDRLLLCDG-CDAGYHMECLTPPL---DAVPVEE-WF 225
Query: 575 CPGC 578
CP C
Sbjct: 226 CPEC 229
Score = 67 (28.6 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 37/160 (23%), Positives = 70/160 (43%)
Query: 903 NSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQ 962
NS ++ NR T S + T ++ + T S + SS + A+S + +
Sbjct: 708 NSGRKQAVDNRETGTS---QQNRTLDVQKQTVDRTGASSSFSSSFTST-ASSYSASSNSR 763
Query: 963 SNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKNNTQECNSIKPTSQTSRKRDRDGK 1022
+ +++ N +G N ++ + G + GD + +T+ N K +SRK+ +D K
Sbjct: 764 PSSSSISFRINSSG--NPWQTRRLLASGGALFGDDEESTKINNKSKRILLSSRKKKKDEK 821
Query: 1023 SGDQASDPSSKMEVIQGLSANSPKVE-VQANGRTRRRRNS 1061
+ DP S S N P+VE ++ + + R + S
Sbjct: 822 C--EVYDPFSPTG--SDSSDNEPEVEGLEDSAKNARSQMS 857
Score = 52 (23.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 21/104 (20%), Positives = 46/104 (44%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
+ ++K K+ S + K +++ +++ + + + +RR R K + S
Sbjct: 1018 QSQSKDNKQSPSNCQSFHYKDCHKTKHSRSKEKRRSRSRSRDRRRSRSKSKERQRSRSKE 1077
Query: 871 KSH-----EGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQ 909
+ H + CS+ SR R TS +K+ + ++ N +E Q
Sbjct: 1078 RKHVHSRDKRCSSSSSRERS--TSGKKV---ICERSDNRGRERQ 1116
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 21/58 (36%), Positives = 26/58 (44%)
Query: 851 TPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRG--RRHRTSYR-KLGEE-VTQKLYNS 904
TP+ R R + T S +KS SRG RR R R KL + V +K NS
Sbjct: 322 TPRSRPRRRRKTVKRRKSKSKSSSTSGGKPSRGVKRRKRKVRRSKLRRKLVVKKETNS 379
Score = 41 (19.5 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRP 858
TP R R+ K K + ++++++ G+P
Sbjct: 322 TPRSRPRRRRKTVKRRKSKSKSSSTSGGKP 351
>UNIPROTKB|A7E320 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9913 "Bos taurus" [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0000791 "euchromatin"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0035064 "methylated histone residue binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0016574 "histone ubiquitination"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031493 "nucleosomal
histone binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:DAAA02019593
EMBL:DAAA02019594 EMBL:BC151671 IPI:IPI00904793
RefSeq:NP_001096568.1 UniGene:Bt.64682 ProteinModelPortal:A7E320
SMR:A7E320 STRING:A7E320 Ensembl:ENSBTAT00000044908 GeneID:530411
KEGG:bta:530411 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ
NextBio:20875252 ArrayExpress:A7E320 GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 Uniprot:A7E320
Length = 786
Score = 136 (52.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K D + +CD CD FH YCL PPL +PP++E W CP DC++D +
Sbjct: 322 CHVCGGKQ-DPDKQL-MCD-ECDMAFHIYCLRPPL--SSVPPEEE-WYCP--DCRIDSSE 373
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G +L + K+ A + +D G+A
Sbjct: 374 VVQA--GEKLKESKKKAKM-ASATSSSQRDWGKGMA 406
>UNIPROTKB|H0YCN2 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000526324
Bgee:H0YCN2 Uniprot:H0YCN2
Length = 803
Score = 137 (53.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 32/76 (42%), Positives = 41/76 (53%)
Query: 517 EGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCP 576
E + +D C KCG + I+LCD +CD G+H CL PPL+ I PD E W CP
Sbjct: 685 EAILADDDEPCKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM---IIPDGE-WFCP 737
Query: 577 GCDCKVDCIDLVNELQ 592
C K+ C L +LQ
Sbjct: 738 PCQHKLLCEKLEEQLQ 753
Score = 49 (22.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 25/113 (22%), Positives = 45/113 (39%)
Query: 38 ECIHSEPLESKSLLGSEAVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPS------ 91
E + LES+ EA E P I + EKL A +V + T + S
Sbjct: 409 EEVPKSTLESEKPGSPEAAETSPPSNIIDHCEKL-ASEKEVVECQSTSTVGGQSVKKVDL 467
Query: 92 EDMRKSTQTNKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDKPQATS 144
E +++ ++ K + ++ E + S QK + Y++V ++ S
Sbjct: 468 ETLKEDSEFTKVEMDNLDNAQTSGIEEPSETKGSMQKSKFKYKLVPEEETTAS 520
Score = 45 (20.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 38 ECIHSEPLESKSLLGSEAVENEPRETSIPNSEKLQAFCGDVPDSSFTDHLAPPSE--DMR 95
EC+ K+ L +A P +P S L++ + P S +PPS D
Sbjct: 384 ECLEKLEKSKKTFLDKDAQRLSPIPEEVPKST-LES---EKPGSPEAAETSPPSNIIDHC 439
Query: 96 KSTQTNKASCSQQNTS 111
+ + K Q+TS
Sbjct: 440 EKLASEKEVVECQSTS 455
>RGD|1309990 [details] [associations]
symbol:Uhrf2 "ubiquitin-like with PHD and ring finger domains 2,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005720 "nuclear
heterochromatin" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 RGD:1309990
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0005720 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0051865 Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:CH473953
Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M CTD:115426 KO:K15713 IPI:IPI00213897
RefSeq:NP_001101055.1 UniGene:Rn.2173 Ensembl:ENSRNOT00000015406
GeneID:309331 KEGG:rno:309331 UCSC:RGD:1309990 NextBio:660596
Uniprot:D3ZK36
Length = 803
Score = 135 (52.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 35/96 (36%), Positives = 49/96 (51%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG K N +LCD C+ +H YCL PPL D P++E W CP C K D +
Sbjct: 348 CHKCGEK--RDPNMQLLCD-ECNMAYHIYCLSPPL---DKVPEEEYWYCPSC--KTDSSE 399
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G +L ++ K+ P A+ +D G+A
Sbjct: 400 VVKA--GEKLKLSKKKAKM-PSASTESRRDWGRGMA 432
Score = 51 (23.0 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 96 KSTQTNKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDK-PQATSLVDNAT-LQP 153
K T N S++NT++ + +++ + Y I +D+ P++ +L NA L+P
Sbjct: 173 KRTNGNVNHNSKENTNKLDNVPSTSNSDSVAADEDVIYHIEYDEYPESGTLEMNAKELRP 232
Query: 154 VSKDVSK 160
++ + K
Sbjct: 233 RARTILK 239
>RGD|1305333 [details] [associations]
symbol:Gsc2 "goosecoid homeobox 2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1305333 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006357
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CH473999 CTD:2928 KO:K09325
OrthoDB:EOG4RFKV2 GeneTree:ENSGT00700000104273 IPI:IPI00870184
RefSeq:NP_001102316.1 UniGene:Rn.218704 Ensembl:ENSRNOT00000041975
GeneID:363831 KEGG:rno:363831 NextBio:684303 Uniprot:D3Z9R9
Length = 214
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 38/98 (38%), Positives = 50/98 (51%)
Query: 858 PKLNTEDSNISPAKSHEGCSTPGS--RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTT 915
P T S SPA + G S PG R RRHRT + EE Q L F +NQYP+ T
Sbjct: 111 PSPLTAPSTGSPALT--GTSGPGPQRRTRRHRTIF---SEEQLQALEALFVQNQYPDVGT 165
Query: 916 KESLAKELGLTFSQVRKWFENTRWSFNHPSS-KNAKLA 952
+E LA + L +V WF+N R + H +++LA
Sbjct: 166 RERLAVRIRLREERVEVWFKNRRAKWRHQKRVSSSRLA 203
>UNIPROTKB|A6NLW8 [details] [associations]
symbol:DUXA "Double homeobox protein A" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC025588
IPI:IPI00556392 RefSeq:NP_001012747.1 UniGene:Hs.585857
ProteinModelPortal:A6NLW8 SMR:A6NLW8 PhosphoSite:A6NLW8
PRIDE:A6NLW8 Ensembl:ENST00000554048 GeneID:503835 KEGG:hsa:503835
UCSC:uc002qoa.1 CTD:503835 GeneCards:GC19M057663 H-InvDB:HIX0016200
HGNC:HGNC:32179 MIM:611168 neXtProt:NX_A6NLW8 PharmGKB:PA142671924
eggNOG:NOG289976 HOGENOM:HOG000112297 InParanoid:A6NLW8 OMA:PGYATKQ
OrthoDB:EOG4N04FW GenomeRNAi:503835 NextBio:112042 Bgee:A6NLW8
CleanEx:HS_DUXA Genevestigator:A6NLW8 Uniprot:A6NLW8
Length = 204
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 849 ENTPKRRG---RPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSF 905
+N R G RP+ T +S+ S + G RR RT+Y L +F
Sbjct: 64 QNRRARHGFQKRPEAETLESSQSQGQDQPGVEFQSREARRCRTTY---SASQLHTLIKAF 120
Query: 906 KENQYPNRTTKESLAKELGLTFSQVRKWFENTR 938
+N YP ++E LAKE+G+ S+V+ WF+N R
Sbjct: 121 MKNPYPGIDSREELAKEIGVPESRVQIWFQNRR 153
>UNIPROTKB|F1MLK1 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050434 "positive regulation of viral transcription"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0031213 "RSF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016584
GO:GO:0006334 GO:GO:0050434 GO:GO:0043392 GO:GO:0031213 OMA:QPRVLPS
EMBL:DAAA02062726 EMBL:DAAA02062727 IPI:IPI00924309
Ensembl:ENSBTAT00000061202 GeneTree:ENSGT00530000064411
Uniprot:F1MLK1
Length = 1355
Score = 145 (56.1 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 47/149 (31%), Positives = 70/149 (46%)
Query: 448 LNRINYEQNLIDAYSSEGWKGLSVEKLKPEKELQRATSEILRR-KLKIRDLFQRLDSLCA 506
L + + ++NL A K V K+KP+ +++ S R K D + DS +
Sbjct: 730 LQKTDKKENLKKAEKDTNSK---VAKVKPKGKVRWTGSRTRGRWKYSSNDESEGSDSEKS 786
Query: 507 GGFPKSLFDSEGQ---IDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLK 563
+ + E + + +D C KCG + I+LCD +CD G+H CL PPL+
Sbjct: 787 SAASEEEEEKESEEAILADDDEPCKKCGLPN--HPELILLCD-SCDSGYHTACLRPPLM- 842
Query: 564 EDIPPDDEGWLCPGCDCKVDCIDLVNELQ 592
I PD E W CP C K+ C L +LQ
Sbjct: 843 --IIPDGE-WFCPPCQHKLLCEKLEEQLQ 868
Score = 54 (24.1 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 22/98 (22%), Positives = 42/98 (42%)
Query: 833 RRRKSTKAAKEKLN-----ETENTPK--RRGRPKLNTEDSNISPAKSHEGCSTPGSR--- 882
RRR+S + K ++N E++ + K RRG+ +S + S E + S
Sbjct: 1119 RRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSDSEESYMSKNSEDDE 1178
Query: 883 -GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESL 919
+ + S RK G + Y+ E + + +++ L
Sbjct: 1179 LAKESKRSVRKRGRSTDE--YSEADEEEEEGKPSRKRL 1214
Score = 50 (22.7 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRP-KLNTEDSNISPAKSHEGCSTPGS-- 881
PD ++K +K +K L E +T R+ + + D I A + G
Sbjct: 903 PDFSEDHEEKKKDSKKSKANLLERRSTRTRKCISYRFDEFDEAIDEAIEDDIKEADGGGV 962
Query: 882 -RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNR 913
RG+ T G++++ L KEN+ P R
Sbjct: 963 GRGKDISTITGHRGKDISTILDEERKENKRPQR 995
Score = 50 (22.7 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 23/97 (23%), Positives = 42/97 (43%)
Query: 819 EGSSASPDGKTPVIRRRKSTKAAKEK-LNETENTPKRRGRPKLNTEDSNISPAKSHEGCS 877
E + + K V +R +ST E E E P R+ ++ T++ S +H
Sbjct: 1175 EDDELAKESKRSVRKRGRSTDEYSEADEEEEEGKPSRKRLHRIETDEEE-SCDNAHGDAD 1233
Query: 878 TPGSRGRRHRTSYRKLGEEVTQKLY--NSFKENQYPN 912
P + R+ R + ++ T+K Y +S +E + N
Sbjct: 1234 QP-AHDRQPRVLPSE--QDSTKKPYRIDSDEEEDFEN 1267
Score = 37 (18.1 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 94 MRKSTQTNKASCSQQNTSEQKHGTELMHNEQSEQK 128
++ S+Q + +S + E++ E +Q EQK
Sbjct: 140 LKNSSQQDSSSRESPSLEEEETKKEEETTKQEEQK 174
>FB|FBgn0001170 [details] [associations]
symbol:H2.0 "Homeodomain protein 2.0" species:7227
"Drosophila melanogaster" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS;NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 EMBL:AE014134
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104097
eggNOG:NOG331357 KO:K09339 EMBL:Y00843 EMBL:AY119136 EMBL:BT025227
PIR:S00994 RefSeq:NP_523488.2 UniGene:Dm.2767
ProteinModelPortal:P10035 SMR:P10035 IntAct:P10035 MINT:MINT-314538
PRIDE:P10035 EnsemblMetazoa:FBtr0079227 GeneID:33841
KEGG:dme:Dmel_CG11607 CTD:33841 FlyBase:FBgn0001170
InParanoid:P10035 OMA:WRHTREN OrthoDB:EOG4WWQ1W PhylomeDB:P10035
GenomeRNAi:33841 NextBio:785548 Bgee:P10035 GermOnline:CG11607
Uniprot:P10035
Length = 418
Score = 131 (51.2 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 36/136 (26%), Positives = 68/136 (50%)
Query: 874 EGCSTPGSRGRRHRTSYRKLGEEVTQK-LYNSFKENQYPNRTTKESLAKELGLTFSQVRK 932
+G ++ GS G+R R+ R + + +K L F++ +Y + + LA L LT +QV+
Sbjct: 282 QGNASAGSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKV 341
Query: 933 WFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDTGC 992
WF+N R + H + +N K ++ + P+S V + S +G Q + D+ C
Sbjct: 342 WFQNRRMKWRH-TRENLKSGQEKQPSAVPESGG--VFKTSTPSGDGTPQEALDYSSDS-C 397
Query: 993 MTGDVKNNTQECNSIK 1008
+ D+ E ++I+
Sbjct: 398 SSVDLSEQADEDDNIE 413
Score = 45 (20.9 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 79 PDSSFTDHLAPPSEDMRKSTQTNKASCSQQNTSEQK--HGTELMHNEQSEQKHQ 130
PD DH P E +T + + S +T++ K + + + E+ H+
Sbjct: 36 PDPVNVDHELPTKESCASTTIVSTSPTSATSTTKVKLSFSVDRLLGSEPEESHR 89
Score = 38 (18.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 50 LLGSEAVENEPRETSIPNSE 69
LLGSE E+ + +S P+++
Sbjct: 79 LLGSEPEESHRQSSSSPSTK 98
>RGD|1305100 [details] [associations]
symbol:Pbx4 "pre-B-cell leukemia homeobox 4" species:10116
"Rattus norvegicus" [GO:0001741 "XY body" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR005542 InterPro:IPR009057
Pfam:PF00046 Pfam:PF03792 PROSITE:PS50071 SMART:SM00389 RGD:1305100
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001741 GeneTree:ENSGT00390000016426
EMBL:CH474031 OrthoDB:EOG45HRXQ CTD:80714 KO:K15611 OMA:CHRMKSA
IPI:IPI00364631 RefSeq:NP_001101869.1 UniGene:Rn.89526
Ensembl:ENSRNOT00000014265 GeneID:361131 KEGG:rno:361131
UCSC:RGD:1305100 NextBio:675316 Uniprot:D4AA41
Length = 379
Score = 129 (50.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ TKE LA++ G+T SQV WF N R +
Sbjct: 217 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEETKEELARKGGITVSQVSNWFGNKRIRYKK 276
Query: 944 PSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQS 982
+ K + A G + + G ++C + S
Sbjct: 277 NTGKFQEEATMYTGKTSTVTKTRVSGGQTSCQSTPSPDS 315
>UNIPROTKB|F1RK76 [details] [associations]
symbol:GSC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104273 EMBL:CU618331
Ensembl:ENSSSCT00000011076 OMA:GRRAVQC Uniprot:F1RK76
Length = 217
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 33/89 (37%), Positives = 43/89 (48%)
Query: 861 NTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLA 920
+TE S P G P R RRHRT + EE Q L F +NQYP+ T+E LA
Sbjct: 119 STEGSGALPGAGSPG---PQRRTRRHRTIF---SEEQLQALEALFVQNQYPDVGTRERLA 172
Query: 921 KELGLTFSQVRKWFENTRWSFNHPSSKNA 949
+ L +V WF+N R + H +A
Sbjct: 173 GRIRLREERVEVWFKNRRAKWRHQKRASA 201
>UNIPROTKB|F6UA42 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0000791 "euchromatin" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005657 "replication fork"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0010216
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GO:GO:0044729 InterPro:IPR021991
Pfam:PF12148 EMBL:AAMC01100082 EMBL:AAMC01100083 EMBL:AAMC01100084
EMBL:AAMC01100085 EMBL:AAMC01100086 EMBL:AAMC01100087
RefSeq:XP_002940183.1 GeneID:100491405 KEGG:xtr:100491405
Xenbase:XB-GENE-5821474 Bgee:F6UA42 Uniprot:F6UA42
Length = 775
Score = 129 (50.5 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 35/96 (36%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K + + LCD CD FH YCL+PPL P DE W CP DC+ D +
Sbjct: 318 CYVCGGKQ-DPEKQL-LCD-ECDMAFHIYCLKPPL---SAIPQDEDWYCP--DCRNDASE 369
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V L G +L + K+ A++ +D G+A
Sbjct: 370 VV--LAGEKLKESKKKAKM-ASASSSSQRDWGKGMA 402
Score = 54 (24.1 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 825 PDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKS 872
PDG + ++ K K + +E +P + G+ K N+ S +S AKS
Sbjct: 608 PDGYLESLASKEREKENKTE-DELSESPSK-GKRKRNSAGSGLSDAKS 653
Score = 44 (20.5 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 22/120 (18%), Positives = 51/120 (42%)
Query: 215 SDGVEENLQTISEDLTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISS 274
S G+ + +Q + + P + + DA+ C +G+ + SS + G
Sbjct: 62 SVGLNDIVQLLVRQIPDSVPTKDKECGISDADSGCGSGQGESDKNSSCGEGATDVDG--- 118
Query: 275 HEPSVVNYK-LGSQL-EQTELGETSAGELGASLELVVKSSIEQLKQPEVPITIPSTKTSA 332
+P+ +N + +G L ++ +L + +GA E + S +++ + I T ++
Sbjct: 119 -QPAGINSENVGPSLYKKNDLVDARDLNMGAWFEAQIVSVSKRVNPDGMSAEILDTSAAS 177
>UNIPROTKB|F1NQJ4 [details] [associations]
symbol:PBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR005542 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00390000016426 EMBL:AADN02034035 EMBL:AADN02034036
EMBL:AADN02034037 EMBL:AADN02034038 EMBL:AADN02034039
EMBL:AADN02034040 EMBL:AADN02034041 EMBL:AADN02034042
EMBL:AADN02034043 EMBL:AADN02034044 EMBL:AADN02034045
EMBL:AADN02034046 EMBL:AADN02034047 EMBL:AADN02034048
EMBL:AADN02034049 EMBL:AADN02034050 EMBL:AADN02034051
EMBL:AADN02034052 EMBL:AADN02034053 EMBL:AADN02034054
IPI:IPI00573654 Ensembl:ENSGALT00000005426 ArrayExpress:F1NQJ4
Uniprot:F1NQJ4
Length = 284
Score = 126 (49.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 31/97 (31%), Positives = 44/97 (45%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 171 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 230
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAEN 979
K + AN T +N + G +N N
Sbjct: 231 NIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPN 267
>MGI|MGI:1923718 [details] [associations]
symbol:Uhrf2 "ubiquitin-like, containing PHD and RING finger
domains 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005720 "nuclear heterochromatin" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO;ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=ISS] [GO:0042393
"histone binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 MGI:MGI:1923718
Prosite:PS00299 Prosite:PS00518 GO:GO:0030154 GO:GO:0071158
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 eggNOG:COG3440 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 HOGENOM:HOG000124662
HOVERGEN:HBG059298 InterPro:IPR021991 Pfam:PF12148
OrthoDB:EOG408N7M CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AB116653
EMBL:AF274047 EMBL:AK031036 EMBL:AK041564 EMBL:AK042321
EMBL:AK051743 EMBL:AK080925 EMBL:BC060241 IPI:IPI00169767
IPI:IPI00607019 IPI:IPI00757694 RefSeq:NP_659122.2
UniGene:Mm.313364 ProteinModelPortal:Q7TMI3 SMR:Q7TMI3
STRING:Q7TMI3 PhosphoSite:Q7TMI3 PRIDE:Q7TMI3
Ensembl:ENSMUST00000025739 GeneID:109113 KEGG:mmu:109113
UCSC:uc008hef.1 UCSC:uc008heh.1 UCSC:uc008hei.1 InParanoid:Q7TMI3
NextBio:361658 Bgee:Q7TMI3 Genevestigator:Q7TMI3
GermOnline:ENSMUSG00000024817 Uniprot:Q7TMI3
Length = 803
Score = 138 (53.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 36/96 (37%), Positives = 49/96 (51%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG K N +LCD C+ +H YCL PPL D P++E W CP C K D +
Sbjct: 348 CHKCGEK--RDPNMQLLCD-ECNMAYHIYCLSPPL---DKVPEEEYWYCPSC--KTDSSE 399
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G RL ++ K+ P A+ +D G+A
Sbjct: 400 VVKA--GERLKLSKKKAKM-PSASTESRRDWGRGMA 432
Score = 44 (20.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 15/67 (22%), Positives = 32/67 (47%)
Query: 96 KSTQTNKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDK-PQATSLVDNAT-LQP 153
K T N S++NT++ + +++ + Y I +D+ P++ L N L+P
Sbjct: 173 KRTNGNVNHNSKENTNKLDNVPSTSNSDSVAADEDVIYHIEYDEYPESGILEMNVKDLRP 232
Query: 154 VSKDVSK 160
++ + K
Sbjct: 233 RARTILK 239
>TAIR|locus:2089606 [details] [associations]
symbol:AT3G14740 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
SMART:SM00249 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AB023038 KO:K11380
EMBL:AB493614 IPI:IPI00516474 RefSeq:NP_974313.1 UniGene:At.39180
ProteinModelPortal:Q9LUC1 SMR:Q9LUC1 STRING:Q9LUC1
EnsemblPlants:AT3G14740.2 GeneID:820702 KEGG:ath:AT3G14740
TAIR:At3g14740 HOGENOM:HOG000090334 InParanoid:Q9LUC1 OMA:CVIECSE
PhylomeDB:Q9LUC1 ProtClustDB:CLSN2688382 Genevestigator:Q9LUC1
Uniprot:Q9LUC1
Length = 343
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 41/116 (35%), Positives = 59/116 (50%)
Query: 469 LSVEKLKP---EKELQRATSEILRRKLKIR--DLFQRLDSLCAGGFPKSLFDSEGQIDSE 523
L+VE KP EK +++ ++ + L++ D + +D L G K+L S+ +++ E
Sbjct: 93 LNVE-YKPYVEEKSIEKKSTLNVESSLEVEEDDDKENIDPLGKG---KALDLSDREVEDE 148
Query: 524 D-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
D I CA C S D N I+ CDG CD H C PL+K IP D W C C
Sbjct: 149 DGIMCAVCQSTDGDPLNPIVFCDG-CDLMVHASCYGNPLVKA-IPEGD--WFCRQC 200
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 875 GCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWF 934
G P + R+ R +++ Q+L +F+ N+YP+ +T+E +A LT ++VR WF
Sbjct: 29 GAEDPSKKKRQRRQRTHFTSQQL-QELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWF 87
Query: 935 ENTR--WSFNHPSSKNAKLANSEKGTCTPQSN 964
+N R W ++ A+L + G PQ N
Sbjct: 88 KNRRAKWR-KRERNQQAELCKNGFG---PQFN 115
>FB|FBgn0033015 [details] [associations]
symbol:d4 "d4" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 EMBL:AE013599 GO:GO:0046872 GO:GO:0008270
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 HSSP:Q14839 KO:K13196 UniGene:Dm.487
GeneID:35485 KEGG:dme:Dmel_CG2682 CTD:35485 FlyBase:FBgn0033015
GenomeRNAi:35485 NextBio:793658 EMBL:AY058600 EMBL:AF427473
RefSeq:NP_610163.1 SMR:Q7K3G5 DIP:DIP-18634N IntAct:Q7K3G5
STRING:Q7K3G5 EnsemblMetazoa:FBtr0086082 UCSC:CG2682-RA
InParanoid:Q7K3G5 OMA:SYDKTSS Uniprot:Q7K3G5
Length = 497
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 526 YCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
YC+ CG+ D D+ ++ CD CDRG+H YCL PPL+ PP+ W C C
Sbjct: 444 YCSICGTSD--NDDQLLFCDD-CDRGYHMYCLSPPLVT---PPEGS-WSCKLC 489
>UNIPROTKB|Q8MJI9 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9913 "Bos taurus" [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048850 "hypophysis
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0001568 GO:GO:0009953
GO:GO:0000976 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 EMBL:AF453510 EMBL:AF453511
EMBL:AF453512 IPI:IPI00697381 RefSeq:NP_777103.1 UniGene:Bt.11213
ProteinModelPortal:Q8MJI9 SMR:Q8MJI9 STRING:Q8MJI9
Ensembl:ENSBTAT00000009680 GeneID:282563 KEGG:bta:282563 CTD:5626
eggNOG:NOG293463 HOGENOM:HOG000115706 HOVERGEN:HBG053691
InParanoid:Q8MJI9 KO:K09327 OrthoDB:EOG4BZN3X NextBio:20806292
GO:GO:0048850 Uniprot:Q8MJI9
Length = 226
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 41/132 (31%), Positives = 64/132 (48%)
Query: 809 GPRKRTKSTKEG--SSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSN 866
G ++ K TKE SS P+G S + R GRPKL+ +
Sbjct: 5 GSSEQGKQTKEQVCSSLWPEGYPAAETVTSSVDMNTQPYRNLSGV--RVGRPKLSLQ--G 60
Query: 867 ISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLT 926
+ + H SR RRHRT++ E +L ++F NQYP+ +ESLA++ GL+
Sbjct: 61 VQRGRPH-------SR-RRHRTTFSPAQLE---QLESAFGRNQYPDIWARESLAQDTGLS 109
Query: 927 FSQVRKWFENTR 938
++++ WF+N R
Sbjct: 110 EARIQVWFQNRR 121
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 105 (42.0 bits), Expect = 0.00014, P = 0.00014
Identities = 35/123 (28%), Positives = 54/123 (43%)
Query: 846 NETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSF 905
NETE RR + + +++ P EG S+ R+ RT++ K E ++L F
Sbjct: 27 NETEKKSSRRRKESSDNQENRGKP----EG----SSKARKERTAFTK---EQLRELEAEF 75
Query: 906 KENQYPNRTTKESLAKELGLTFSQVRKWFENTR--WSF---NHPSSKNAKLANSEKGTCT 960
+ Y R + +A L L+ QV+ WF+N R W P S N + T +
Sbjct: 76 AHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVKGGQPISPNGQDPEDGDSTAS 135
Query: 961 PQS 963
P S
Sbjct: 136 PSS 138
>UNIPROTKB|F1RSD4 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
EMBL:CU138499 Ensembl:ENSSSCT00000006879 Uniprot:F1RSD4
Length = 141
Score = 105 (42.0 bits), Expect = 0.00014, P = 0.00014
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR+RT++ Q L F+ YP+ +E LA+ + LT ++V+ WF+N R F
Sbjct: 17 RRNRTTFNS---SQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 73
Query: 944 P-----SSKNAKLANSEKGTCT 960
++KNA L S G T
Sbjct: 74 NERAMLANKNASLLKSYSGDVT 95
>UNIPROTKB|F1P4F7 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005657 "replication fork" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0031493 "nucleosomal histone binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
SMART:SM00466 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 GO:GO:0000792
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 OMA:HVEPGLQ InterPro:IPR021991
Pfam:PF12148 EMBL:AADN02062015 IPI:IPI00586414
Ensembl:ENSGALT00000006575 Uniprot:F1P4F7
Length = 733
Score = 132 (51.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 36/96 (37%), Positives = 49/96 (51%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K D + +CD CD FH YCL PPL IP DDE W CP +C+ D +
Sbjct: 274 CHICGGKQ-DPDKQL-MCD-ECDMAFHIYCLNPPL--SSIP-DDEDWYCP--ECRNDASE 325
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V L G +L + +K+ A + +D G+A
Sbjct: 326 VV--LAGEKLKESKKKQKM-ASANSSSRRDWGKGMA 358
Score = 48 (22.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 833 RRRKSTKAAKEKLNETENTPKR-RGRP-KLNTEDSNI 867
R+RKS A ++ ++ TPK+ + P KL T+ ++
Sbjct: 592 RKRKSAGAEEKVVSSPAGTPKKTKVEPYKLTTQQKSL 628
>ZFIN|ZDB-GENE-990714-27 [details] [associations]
symbol:pitx2 "paired-like homeodomain transcription
factor 2" species:7955 "Danio rerio" [GO:0021501 "prechordal plate
formation" evidence=IGI] [GO:0060971 "embryonic heart tube
left/right pattern formation" evidence=IDA] [GO:0071907
"determination of digestive tract left/right asymmetry"
evidence=IDA] [GO:0048382 "mesendoderm development" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043114
"regulation of vascular permeability" evidence=IGI] [GO:0061386
"closure of optic fissure" evidence=IMP] [GO:0048593 "camera-type
eye morphogenesis" evidence=IMP] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IMP] [GO:0060325 "face
morphogenesis" evidence=IMP] [GO:0048596 "embryonic camera-type eye
morphogenesis" evidence=IMP] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990714-27 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048384
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0060325
GO:GO:0048382 GO:GO:0071907 GO:GO:0048703 GO:GO:0060971
GO:GO:0021501 GO:GO:0061386 eggNOG:NOG249113 HOGENOM:HOG000273886
HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438 CTD:5308 KO:K04686
EMBL:AF156905 EMBL:AF156906 EMBL:AF181681 EMBL:AF132446
EMBL:AF132447 EMBL:BC092922 IPI:IPI00486280 IPI:IPI00507463
RefSeq:NP_571050.1 UniGene:Dr.81292 ProteinModelPortal:Q9W5Z2
SMR:Q9W5Z2 STRING:Q9W5Z2 Ensembl:ENSDART00000052569
Ensembl:ENSDART00000148319 GeneID:30164 KEGG:dre:30164
InParanoid:Q568C4 OMA:DMYPSYT NextBio:20806634 Bgee:Q9W5Z2
Uniprot:Q9W5Z2
Length = 314
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 39/118 (33%), Positives = 60/118 (50%)
Query: 849 ENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKEN 908
E+ K +G+ K EDSN P+K R RR RT + + Q+L +F+ N
Sbjct: 58 ESVEKEKGQSK--NEDSNDDPSKK--------KRQRRQRTHFTS---QQLQELEATFQRN 104
Query: 909 QYPNRTTKESLAKELGLTFSQVRKWFENTR--WSFNHPSSKNAKLANSEKGTCTPQSN 964
+YP+ +T+E +A LT ++VR WF+N R W ++ A+L + G PQ N
Sbjct: 105 RYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAELCKNGFG---PQFN 158
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 135 (52.6 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 521 DSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+ ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP C
Sbjct: 179 EEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCPEC 230
Score = 62 (26.9 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 39/183 (21%), Positives = 72/183 (39%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISP 869
PR++ K S+S + R R K AK+K E P G + + + SP
Sbjct: 1042 PRRQRSKAKSRRSSSDRSSS---RERAKRKKAKDKSREHRRGPW--GHSRRTSRSRSGSP 1096
Query: 870 -AKSHEGCSTPGSRGRRHRTSYRKLGEEV--TQKLYNSFKENQYPNRTTKESLAKELGLT 926
+ S+E + + ++ R++ R G E T L + R+ + KE +
Sbjct: 1097 GSSSYEHYES--RKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERSHERPDRKE-SVA 1153
Query: 927 FSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTG 986
+ + R+ + S H + ++ + + EK T + G V + A Q + G
Sbjct: 1154 WPRDRRKRRSRSPSSEHRAREHRRPRSREKWPQTRSHSPERKGAVREASPAPLAQG-EPG 1212
Query: 987 VDD 989
+D
Sbjct: 1213 RED 1215
Score = 53 (23.7 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTE 863
P +R + T+ KTP KS +A KRRG+ K+ +E
Sbjct: 334 PARRKRKTRRRKKVPGRKKTPSGPSAKSKSSATRSKKRQHRVKKRRGK-KVKSE 386
Score = 53 (23.7 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 29/92 (31%), Positives = 37/92 (40%)
Query: 975 NGAENVQSSKTGVDDTGCMTGDV---KNNTQECNSIKPTSQT-SRKRDRDGKSGDQASDP 1030
N A + Q S G +T D K N SIK T Q S D +G +S P
Sbjct: 784 NMAHSSQLSSPGFCNTFRPVDDKEQRKENPSPLFSIKKTKQLRSEVYDPSDPTGSDSSAP 843
Query: 1031 SSK----------MEVIQGLSANSPKVE-VQA 1051
S E+ + +S NSPK + VQA
Sbjct: 844 GSSPERSGPGLLPSEITRTISINSPKAQTVQA 875
Score = 45 (20.9 bits), Expect = 0.00099, Sum P(4) = 0.00098
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRT 888
T V +R + + + +T K GR K + S AKS S S+ R+HR
Sbjct: 322 TAVYQRPLTPRTPARRKRKTRRRKKVPGRKKTPSGPS----AKSKS--SATRSKKRQHRV 375
Query: 889 SYRKLGEEV 897
R+ G++V
Sbjct: 376 KKRR-GKKV 383
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 88 APPSEDMRKSTQTNKASCSQQNTSEQKHGTELMHNEQSEQK 128
A P+ D +S+ + + SE GT+ SE++
Sbjct: 25 ADPAGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEE 65
>UNIPROTKB|G3V309 [details] [associations]
symbol:DUX4L2 "Double homeobox protein 4-like protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC126281 HGNC:HGNC:37267 HGNC:HGNC:37266
SMR:G3V309 Ensembl:ENST00000554376 Ensembl:ENST00000554416
Uniprot:G3V309
Length = 163
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 840 AAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRG----RRHRTSYRKLGE 895
A +E+L + P+ R + E S E PG RG RR RT+ G
Sbjct: 47 ATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVT--GS 104
Query: 896 EVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNHP 944
+ T L +F+++++P +E LA+E GL S+++ WF+N R HP
Sbjct: 105 Q-TALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRR--ARHP 150
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 137 (53.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 519 QIDSED-IYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPG 577
+ + ED +C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP
Sbjct: 179 EAEEEDPTFCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCP- 230
Query: 578 CDCKVDCID 586
+C V +D
Sbjct: 231 -ECTVPGVD 238
Score = 50 (22.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 20/78 (25%), Positives = 32/78 (41%)
Query: 810 PRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKL-NETENTPKRRGRPKLNTEDSNIS 868
P+ T E ++S T R RK TK K+K+ E + T + ++S
Sbjct: 986 PQITTHRIVEFRASSRSRSTSSSRSRKKTKKKKKKVAREHQRTRSSTRSGSRDRTSRSVS 1045
Query: 869 P-AKSHEGCSTPGSRGRR 885
P A+ H ++ RR
Sbjct: 1046 PVAEEHTRRHRAKTKSRR 1063
Score = 44 (20.5 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 811 RKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPA 870
+ R++S GSS+ ++ +RR S ++ E + K R R + D S
Sbjct: 1101 KSRSRSGSPGSSSCERHESKRRKRRHSGSRSRGSSLERDRRHKHRERSR-ERMDKQESVT 1159
Query: 871 KSHE 874
+S E
Sbjct: 1160 RSRE 1163
>UNIPROTKB|F1S6Q4 [details] [associations]
symbol:PBX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 Pfam:PF00046 Pfam:PF03792 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00390000016426
EMBL:FP015820 Ensembl:ENSSSCT00000015219 Uniprot:F1S6Q4
Length = 309
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 39/131 (29%), Positives = 58/131 (44%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LA++ G+T SQV WF N R +
Sbjct: 148 RRKRQNFSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRIRYKK 207
Query: 944 PSSKNAKLAN--SEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKNNT 1001
K + A + K P + G+ S C + SS +G TGD
Sbjct: 208 NMRKFQEEATIYTAKTAGDPTEVRGQGGQAS-CPSMPS--SSSSGPFPLSS-TGDALITL 263
Query: 1002 QECNSIKPTSQ 1012
Q S++P+ +
Sbjct: 264 QTLTSLQPSPE 274
>UNIPROTKB|I3LCL1 [details] [associations]
symbol:PBX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 Pfam:PF00046 Pfam:PF03792 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00390000016426
EMBL:FP015820 Ensembl:ENSSSCT00000025987 Uniprot:I3LCL1
Length = 312
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 39/131 (29%), Positives = 58/131 (44%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LA++ G+T SQV WF N R +
Sbjct: 148 RRKRQNFSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRIRYKK 207
Query: 944 PSSKNAKLAN--SEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKNNT 1001
K + A + K P + G+ S C + SS +G TGD
Sbjct: 208 NMRKFQEEATIYTAKTAGDPTEVRGQGGQAS-CPSMPS--SSSSGPFPLSS-TGDALITL 263
Query: 1002 QECNSIKPTSQ 1012
Q S++P+ +
Sbjct: 264 QTLTSLQPSPE 274
>UNIPROTKB|Q96PU4 [details] [associations]
symbol:UHRF2 "E3 ubiquitin-protein ligase UHRF2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=IDA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEP] [GO:0051726 "regulation of cell cycle" evidence=TAS]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0003677 GO:GO:0008283 GO:GO:0008270 GO:GO:0005720
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 EMBL:AL353718 eggNOG:COG3440 Gene3D:2.30.280.10
HOGENOM:HOG000124662 HOVERGEN:HBG059298 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M EMBL:AB071698 EMBL:AF274049
EMBL:AL133480 EMBL:BC028397 EMBL:AL137728 IPI:IPI00044681
IPI:IPI00395464 RefSeq:NP_690856.1 UniGene:Hs.493401 PDB:1WY8
PDB:1Z6U PDB:2E6S PDB:3OLN PDBsum:1WY8 PDBsum:1Z6U PDBsum:2E6S
PDBsum:3OLN ProteinModelPortal:Q96PU4 SMR:Q96PU4 IntAct:Q96PU4
MINT:MINT-1196856 STRING:Q96PU4 PhosphoSite:Q96PU4 DMDM:67462076
PaxDb:Q96PU4 PeptideAtlas:Q96PU4 PRIDE:Q96PU4 DNASU:115426
Ensembl:ENST00000276893 Ensembl:ENST00000450508
Ensembl:ENST00000468435 GeneID:115426 KEGG:hsa:115426
UCSC:uc003zjy.3 CTD:115426 GeneCards:GC09P006405 HGNC:HGNC:12557
HPA:HPA026633 HPA:HPA026697 neXtProt:NX_Q96PU4 PharmGKB:PA37197
InParanoid:Q96PU4 KO:K15713 OMA:VNHNSKE ChiTaRS:UHRF2
EvolutionaryTrace:Q96PU4 GenomeRNAi:115426 NextBio:79598
ArrayExpress:Q96PU4 Bgee:Q96PU4 CleanEx:HS_UHRF2
Genevestigator:Q96PU4 GermOnline:ENSG00000147854 Uniprot:Q96PU4
Length = 802
Score = 130 (50.8 bits), Expect = 0.00018, P = 0.00018
Identities = 35/96 (36%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K N +LCD C+ +H YCL PPL D P++E W CP C K D +
Sbjct: 347 CRVCGGKH--EPNMQLLCD-ECNVAYHIYCLNPPL---DKVPEEEYWYCPSC--KTDSSE 398
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V G RL ++ K+ P A+ +D G+A
Sbjct: 399 VVKA--GERLKMSKKKAKM-PSASTESRRDWGRGMA 431
>FB|FBgn0000577 [details] [associations]
symbol:en "engrailed" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0000980 "RNA polymerase
II distal enhancer sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0035224 "genital disc anterior/posterior
pattern formation" evidence=IEP;TAS] [GO:0007400 "neuroblast fate
determination" evidence=IGI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0007448
"anterior/posterior pattern specification, imaginal disc"
evidence=TAS] [GO:0048099 "anterior/posterior lineage restriction,
imaginal disc" evidence=TAS] [GO:0048100 "wing disc
anterior/posterior pattern formation" evidence=TAS] [GO:0007386
"compartment pattern specification" evidence=NAS;TAS] [GO:0007417
"central nervous system development" evidence=NAS] [GO:0007367
"segment polarity determination" evidence=NAS;TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0007447 "imaginal disc pattern formation" evidence=TAS]
[GO:0007485 "imaginal disc-derived male genitalia development"
evidence=TAS] [GO:0007487 "analia development" evidence=TAS]
[GO:0007486 "imaginal disc-derived female genitalia development"
evidence=TAS] [GO:0007388 "posterior compartment specification"
evidence=TAS] [GO:0035288 "anterior head segmentation"
evidence=TAS] [GO:0035290 "trunk segmentation" evidence=TAS]
[GO:0035289 "posterior head segmentation" evidence=TAS] [GO:0035215
"genital disc development" evidence=IMP] [GO:0035277 "spiracle
morphogenesis, open tracheal system" evidence=IMP] [GO:0021960
"anterior commissure morphogenesis" evidence=IMP] [GO:0007418
"ventral midline development" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0010629 "negative regulation of gene
expression" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE013599 GO:GO:0005634
GO:GO:0007411 GO:GO:0008406 GO:GO:0001078 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0035224
GO:GO:0007400 GO:GO:0000980 GO:GO:0007486 GO:GO:0035277
GO:GO:0007367 GO:GO:0021960 GO:GO:0035288 GO:GO:0035289
GO:GO:0007485 GO:GO:0007487 GO:GO:0048100 GO:GO:0007418
GO:GO:0035290 GO:GO:0048099 GeneTree:ENSGT00680000099870
eggNOG:NOG306728 PROSITE:PS00033 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 KO:K09319 EMBL:M10017 EMBL:K03055
EMBL:K03056 EMBL:AY069448 EMBL:X01765 PIR:A90862 RefSeq:NP_523700.2
RefSeq:NP_725059.1 UniGene:Dm.22056 PDB:1DU0 PDB:1ENH PDB:1HDD
PDB:1P7I PDB:1P7J PDB:1ZTR PDB:2HDD PDB:2HOS PDB:2HOT PDB:2JWT
PDB:2P81 PDB:3HDD PDBsum:1DU0 PDBsum:1ENH PDBsum:1HDD PDBsum:1P7I
PDBsum:1P7J PDBsum:1ZTR PDBsum:2HDD PDBsum:2HOS PDBsum:2HOT
PDBsum:2JWT PDBsum:2P81 PDBsum:3HDD ProteinModelPortal:P02836
SMR:P02836 IntAct:P02836 MINT:MINT-310169 STRING:P02836
EnsemblMetazoa:FBtr0088095 EnsemblMetazoa:FBtr0088096 GeneID:36240
KEGG:dme:Dmel_CG9015 CTD:36240 FlyBase:FBgn0000577
InParanoid:P02836 OMA:AYPRIHE OrthoDB:EOG4866W0 PhylomeDB:P02836
EvolutionaryTrace:P02836 GenomeRNAi:36240 NextBio:797500
Bgee:P02836 GermOnline:CG9015 GO:GO:0007388 Uniprot:P02836
Length = 552
Score = 95 (38.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
+R RT++ E +L F EN+Y ++ L+ ELGL +Q++ WF+N R
Sbjct: 455 KRPRTAF---SSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKK 511
Query: 944 PS-SKN 948
+ SKN
Sbjct: 512 STGSKN 517
Score = 82 (33.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 72/324 (22%), Positives = 130/324 (40%)
Query: 36 CAECIHSEPL-----ESKSLLGSEAVENEPRETSIPN-SEKLQAFCGDVPDSSFTDHLAP 89
C+ S PL ES S++G + N+ T+ +E+ DV D+S L P
Sbjct: 101 CSTPASSTPLTIKEEESDSVIGDMSFHNQTHTTNEEEEAEEDDDIDVDVDDTSAGGRLPP 160
Query: 90 PSEDMRKSTQTNKASCSQQNTSEQKHGTELMHNEQSEQKHQLCYQIVFDKPQATSLVDNA 149
P+ ++ST + S N + G ++ +S + ++ F+ ++ + +A
Sbjct: 161 PAHQ-QQSTAKPSLAFSISNILSDRFG-DVQKPGKSMENQASIFR-PFEASRSQTATPSA 217
Query: 150 TLQPVSKDVSKSSQTGNRQALDFLSGNRCNELDVDCVHSEPLNQKHQLGSEIIQNE---P 206
+ + S+ Q A + R N L+ C + + H+ EI+Q+
Sbjct: 218 FTRVDLLEFSRQQQAAAAAATAAMMLERANFLN--CFNPAAYPRIHE---EIVQSRLRRS 272
Query: 207 AVNIARLP------SDGVEEN--LQTISEDLTKVC-PVEPSQSPPRDANKSCQAGEISCL 257
A N P SD E L ++ + ++++ P P+ + P S A ++
Sbjct: 273 AANAVIPPPMSSKMSDANPEKSALGSLCKAVSQIGQPAAPTMTQPP---LSSSASSLASP 329
Query: 258 QQSSSEQTPEFTPGISSHEPSVVNYKLGSQLEQTELGETSAGELGASLELVVKSSIEQLK 317
+S+ T T +++ S + G + L + + LGAS V SS
Sbjct: 330 PPASNASTISSTSSVATSSSSSSS---GCSSAASSLNSSPSSRLGASGSGVNASS----P 382
Query: 318 QPEVPITIPSTKTSATKHLQSSSD 341
QP+ PI PS S ++SS D
Sbjct: 383 QPQ-PIPPPSA-VSRDSGMESSDD 404
>WB|WBGene00006766 [details] [associations]
symbol:unc-30 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0040011 "locomotion" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0097154 "GABAergic
neuron differentiation" evidence=IMP] [GO:0033563 "dorsal/ventral
axon guidance" evidence=IMP] [GO:0040012 "regulation of locomotion"
evidence=IMP] [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IC] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR016233 InterPro:IPR017970 Pfam:PF00046
PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0040012 GO:GO:0000983 KO:K09362 GO:GO:0033563
EMBL:Z73422 eggNOG:NOG249113 GeneTree:ENSGT00700000104438
EMBL:L37867 PIR:T18786 PIR:T43635 RefSeq:NP_001021276.1
RefSeq:NP_001021277.1 UniGene:Cel.19751 ProteinModelPortal:P52906
SMR:P52906 STRING:P52906 EnsemblMetazoa:B0564.10b GeneID:178265
KEGG:cel:CELE_B0564.10 UCSC:B0564.10a CTD:178265 WormBase:B0564.10a
WormBase:B0564.10b HOGENOM:HOG000016380 InParanoid:P52906
OMA:WISLTEP NextBio:900422 GO:GO:0097154 Uniprot:P52906
Length = 323
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 39/138 (28%), Positives = 67/138 (48%)
Query: 859 KLNTEDSNI---SPAKSHEGCSTPGSR---GRRHRTSYRKLGEEVTQKLYNSFKENQYPN 912
K +D+++ SP S ST G + RR RT + ++T+ L N F N+YP+
Sbjct: 82 KQEQDDNHLDTSSPTDSTGNGSTNGGKIQKPRRQRTHFTS--HQLTE-LENWFSRNRYPD 138
Query: 913 RTTKESLAKELGLTFSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVS 972
+E +A + LT +VR WF+N R + +N + N + T + + +G +
Sbjct: 139 MACREEIAVWISLTEPRVRVWFKNRRAKWRK-RERNYVIDNGQGTTKVTAQSLDPLGSLQ 197
Query: 973 NCNGAENVQSSKTGVDDT 990
N +QSS + +DD+
Sbjct: 198 NTFPQTLLQSSSSQLDDS 215
>FB|FBgn0052580 [details] [associations]
symbol:Muc14A "Mucin 14A" species:7227 "Drosophila
melanogaster" [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=ISM] [GO:0005201 "extracellular
matrix structural constituent" evidence=ISM] InterPro:IPR000195
InterPro:IPR016024 SUPFAM:SSF48371 EMBL:AE014298 GO:GO:0005622
GO:GO:0031012 GeneTree:ENSGT00550000074593 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 GO:GO:0005201 RefSeq:NP_727928.3
UniGene:Dm.26527 ProteinModelPortal:Q8IR22
EnsemblMetazoa:FBtr0074205 GeneID:318097 KEGG:dme:Dmel_CG32580
UCSC:CG32580-RA CTD:318097 FlyBase:FBgn0052580 OMA:TAQEETS
OrthoDB:EOG4280JG GenomeRNAi:318097 NextBio:844792 Bgee:Q8IR22
Uniprot:Q8IR22
Length = 16,223
Score = 124 (48.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 101/397 (25%), Positives = 163/397 (41%)
Query: 2 SKAEHMGVSPSQVTSSTRDHSCLKQTTPE--QMCKF---CAECIHSEPLESKSLLGSEAV 56
++ E +S S +T + S ++++ E QM + + + E+K++ S++V
Sbjct: 3551 AQEETSELSKSLPQLTTEESSSFQESSAEENQMTEVPWTLSTSLSQSSSEAKNIFSSQSV 3610
Query: 57 ENEPRETSIPNSEKLQAFCGDVPDSSFT-DHLAPPS--EDMRKSTQTNKASCS-QQNTSE 112
++ +TS E + VP SS T + L S E+ +T++ S S Q T+E
Sbjct: 3611 NDD--KTS---QEDTRTPSISVPQSSTTANRLLTGSSAEEPTAQEETSEHSKSLPQLTTE 3665
Query: 113 QKHGTELMHNEQSEQKHQLC---YQIVFDKPQATSLVDNA-TLQPVSKDVSKSSQTGNRQ 168
+ + E S ++HQ + + Q++S N + Q V++D T
Sbjct: 3666 ESSSFQ----ESSAEEHQTTEVPWTLSTSPSQSSSKTKNIFSSQSVNEDKISQEDTRTLS 3721
Query: 169 ALDFLSGNRCNELDVDCVHSEPLNQKHQLGSEIIQNEPAVNIARLPS---DGVEENLQTI 225
S N L + E Q+ SE+ ++ P + S EEN T
Sbjct: 3722 ISVSQSSTTANRLLTGSIAEEQTAQEET--SELSKSLPQLTTEESSSFQKSSAEENQMT- 3778
Query: 226 SEDLTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISSHEPSVVNYKL- 284
T + S S ++ S + ++S E T TP IS + S L
Sbjct: 3779 EVPWTLSTSLSQSSSEAKNIFSSQSVND----DKTSQEDTR--TPSISVPQSSTTANSLL 3832
Query: 285 -GSQLE-QTELGETSAGELGASL-ELVV-------KSSIEQLKQPEVPITI---PSTKTS 331
GS E QT ETS EL SL +L KSS E+ + EVP T+ PS +S
Sbjct: 3833 TGSSAEEQTAQEETS--ELSKSLPQLTTEESSSFQKSSAEEHQTTEVPWTLSTSPSQSSS 3890
Query: 332 ATKHLQSSSDLMEKKSCLEQSETPPNYVANNSACLGR 368
TK++ SS + E K E + T V+ +S R
Sbjct: 3891 KTKNIFSSQSVNEDKISQEDTRTLSISVSQSSTTANR 3927
Score = 82 (33.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 46/236 (19%), Positives = 87/236 (36%)
Query: 814 TKSTKEGSSASPDGKTPVIRRRKST---------KAAKEKLNETENTPKRRGRPKLNTED 864
++S E ++ D +TP I +S+ +AKE+ + E + + P+L TE+
Sbjct: 7505 SQSVNEDKTSQEDTRTPSISVPQSSATANRLLTGSSAKEQTAQEETSEHSKSLPQLTTEE 7564
Query: 865 SNI---SPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAK 921
S+ S A+ ++ P + S K + + N K +Q RT S+ +
Sbjct: 7565 SSSFQESSAEENQTTEVPWTPSTSPSQSSSKTKNIFSSQSVNEEKTSQEDTRTLSISVPQ 7624
Query: 922 ELGLTFSQVR--KWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAEN 979
+ T S + E T SK+ +E+ + +S+ N + +
Sbjct: 7625 SIATTNSLLTGSSAEEQTAQEETSEDSKSLPQLTTEESSSFQKSSAEENQMTENIFSSPS 7684
Query: 980 VQSSKTGVDDTGCMTGDVKNNTQECNSIKPTSQTSRKRDRDGKSGDQASDPSSKME 1035
+DT + V + NS+ S + ++ S S P E
Sbjct: 7685 SNEDNISQEDTRTLPISVPQSIATANSLLTGSSAEEQTAQEETSEHSKSLPQLTTE 7740
Score = 80 (33.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 42/201 (20%), Positives = 75/201 (37%)
Query: 840 AAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSY---RKLGEE 896
+A+E+ + E + + + P+L TE+S+ S E T +TS R L
Sbjct: 6786 SAEEQTAQEETSERSKSLPQLTTEESSSFQESSAEENQTTNQSVNEDKTSQEDTRTLSIS 6845
Query: 897 VTQKLY--NSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNHPSSKNAKLANS 954
V Q + NS T + E + Q+ E + SF S++ +
Sbjct: 6846 VPQSIATTNSLLTGSSAEEQTAQEETSEDSKSLPQLTT--EESS-SFQESSAEENQTTEV 6902
Query: 955 EKGTCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKNNTQECNSIKPTSQTS 1014
T S ++ + N +++V KT +DT ++ V + NS+ S
Sbjct: 6903 PWTPSTSPSQSSS--KTKNIFSSQSVNEDKTSQEDTRTLSISVPQSIATTNSLLTGSSAE 6960
Query: 1015 RKRDRDGKSGDQASDPSSKME 1035
+ ++ S S P E
Sbjct: 6961 EQTAQEETSEHSKSLPQLTTE 6981
>UNIPROTKB|I3LNW7 [details] [associations]
symbol:PBX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR005542 InterPro:IPR009057 Pfam:PF00046 Pfam:PF03792
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001741
GeneTree:ENSGT00390000016426 OMA:FYSHLNN EMBL:FP015820
Ensembl:ENSSSCT00000032243 Uniprot:I3LNW7
Length = 338
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 39/131 (29%), Positives = 58/131 (44%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LA++ G+T SQV WF N R +
Sbjct: 148 RRKRQNFSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRIRYKK 207
Query: 944 PSSKNAKLAN--SEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKNNT 1001
K + A + K P + G+ S C + SS +G TGD
Sbjct: 208 NMRKFQEEATIYTAKTAGDPTEVRGQGGQAS-CPSMPS--SSSSGPFPLSS-TGDALITL 263
Query: 1002 QECNSIKPTSQ 1012
Q S++P+ +
Sbjct: 264 QTLTSLQPSPE 274
>UNIPROTKB|B6CHA3 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0000791
"euchromatin" evidence=ISS] [GO:0000792 "heterochromatin"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005657 "replication fork" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0016574 "histone
ubiquitination" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0044729 "hemi-methylated DNA-binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:EU177101
RefSeq:NP_001129236.1 UniGene:Xl.23750 ProteinModelPortal:B6CHA3
GeneID:432234 KEGG:xla:432234 Xenbase:XB-GENE-5821540
Uniprot:B6CHA3
Length = 772
Score = 130 (50.8 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 30/70 (42%), Positives = 38/70 (54%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K + + LCD CD FH YCL+PPL + P DE W CP DC+ D +
Sbjct: 316 CCICGGKQ-DPEKQL-LCD-ECDLAFHIYCLKPPL---SVIPQDEDWYCP--DCRNDASE 367
Query: 587 LVNELQGTRL 596
+V L G +L
Sbjct: 368 VV--LAGEKL 375
Score = 48 (22.0 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 18/93 (19%), Positives = 39/93 (41%)
Query: 215 SDGVEENLQTISEDLTKVCPVEPSQSPPRDANKSCQAGEISCLQQSSSEQTPEFTPGISS 274
S G+ + +Q + + P + + DA+ C +G Q+ S + E +
Sbjct: 62 SVGLNDIVQLLVRQIPDSFPTKHKECELSDASAGCGSG-----QRDSDSGSGEGAMDVDG 116
Query: 275 HEPSVVNYKLGSQL-EQTELGETSAGELGASLE 306
S++ +G+ L ++ +L + +GA E
Sbjct: 117 QSISIIGENVGTSLYKKNDLVDARDLNMGAWFE 149
Score = 44 (20.5 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 998 KNNTQECNSIKPTSQTSRKRDRDGKSGDQASDPSSKMEV 1036
K N E I S+ RKR+ D + S P KM+V
Sbjct: 620 KENKTEDEPIDSPSKGKRKRNSDNEQTAAKSIPK-KMKV 657
>UNIPROTKB|F1NB58 [details] [associations]
symbol:F1NB58 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104273
EMBL:AADN02043256 IPI:IPI00577076 Ensembl:ENSGALT00000009428
ArrayExpress:F1NB58 Uniprot:F1NB58
Length = 196
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 30/80 (37%), Positives = 41/80 (51%)
Query: 882 RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
R RRHRT + EE Q L F +NQYP+ T+E LA + L +V WF+N R +
Sbjct: 116 RTRRHRTIFT---EEQLQALETLFHQNQYPDVITREHLANRIHLKEERVEVWFKNRRAKW 172
Query: 942 NHPSSKNAKLANSEKGTCTP 961
H +A A +G+ P
Sbjct: 173 RHQKRASAS-ALVLQGSAEP 191
>ZFIN|ZDB-GENE-980526-40 [details] [associations]
symbol:eng2b "engrailed 2b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030901 "midbrain development"
evidence=IGI] [GO:0001708 "cell fate specification" evidence=IGI]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-40 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HSSP:P14653 EMBL:BC071290 IPI:IPI00512460
UniGene:Dr.498 ProteinModelPortal:Q6IQW3 SMR:Q6IQW3 STRING:Q6IQW3
InParanoid:Q6IQW3 ArrayExpress:Q6IQW3 Uniprot:Q6IQW3
Length = 261
Score = 119 (46.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 878 TPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENT 937
TP +R RT++ E Q+L N F+ N+Y +++LA+ELGL SQ++ WF+N
Sbjct: 167 TPTKEDKRPRTAFTA---EQLQRLKNEFQNNRYLTEQRRQALAQELGLNESQIKIWFQNK 223
Query: 938 RWSFNHPS-SKNA 949
R + +KNA
Sbjct: 224 RAKIKKATGNKNA 236
Score = 44 (20.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 13/59 (22%), Positives = 23/59 (38%)
Query: 141 QATSLVDNATLQPVSKDVSKSSQTGNRQALDFLS--GNRCNELDVDCVHSEPLNQKHQL 197
Q + T P + + SK + ++L + G++C D DC S K +
Sbjct: 81 QVAPVSGEGTSSPRAVNASKKTDISTDESLKSRAETGDQCLSSDSDCSQSSAAQAKQPM 139
>ZFIN|ZDB-GENE-000201-18 [details] [associations]
symbol:pbx4 "pre-B-cell leukemia transcription
factor 4" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IMP] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0001764 "neuron
migration" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0007411 "axon guidance" evidence=IDA] [GO:0001755
"neural crest cell migration" evidence=IMP] [GO:0048741 "skeletal
muscle fiber development" evidence=IGI] [GO:0048666 "neuron
development" evidence=IMP] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007420 "brain development" evidence=IMP]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=IGI] [GO:0030901 "midbrain development" evidence=IGI]
[GO:0030902 "hindbrain development" evidence=IGI] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0031016 "pancreas
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000201-18 GO:GO:0007411 GO:GO:0001764 GO:GO:0003677
GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0048741
GO:GO:0030901 GO:GO:0030902 GO:GO:0031016 GO:GO:0048701
GO:GO:0060059 eggNOG:NOG248144 HOGENOM:HOG000266972
GeneTree:ENSGT00390000016426 OMA:YGENLGG HSSP:P40424
HOVERGEN:HBG000122 OrthoDB:EOG45HRXQ CTD:80714 EMBL:CU302192
EMBL:AF162696 EMBL:BC162094 EMBL:BC162106 EMBL:AJ245966
IPI:IPI00510937 RefSeq:NP_571522.1 UniGene:Dr.150334 SMR:Q9PW77
STRING:Q9PW77 Ensembl:ENSDART00000104683 GeneID:30728
KEGG:dre:30728 InParanoid:Q9PW77 NextBio:20807077 Uniprot:Q9PW77
Length = 343
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 232 RRKRRNFNKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 291
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 292 NIGKFQEEAN 301
>UNIPROTKB|F1PJN4 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042393 "histone binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:AAEX03012542
EMBL:AAEX03012543 EMBL:AAEX03012544 EMBL:AAEX03012540
EMBL:AAEX03012541 Ensembl:ENSCAFT00000030070 Uniprot:F1PJN4
Length = 792
Score = 128 (50.1 bits), Expect = 0.00030, P = 0.00030
Identities = 35/96 (36%), Positives = 48/96 (50%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K D + +CD CD FH YCL PPL IP +DE W CP +C+ D +
Sbjct: 321 CHLCGGKQ-DPDKQL-MCD-ECDMAFHIYCLRPPL--SSIPKEDE-WYCP--ECRNDASE 372
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V L G +L + K+ A + +D G+A
Sbjct: 373 VV--LAGEKLKESKKKAKM-ASATSSSQRDWGKGMA 405
>MGI|MGI:1351322 [details] [associations]
symbol:Mixl1 "Mix1 homeobox-like 1 (Xenopus laevis)"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IDA] [GO:0000980
"RNA polymerase II distal enhancer sequence-specific DNA binding"
evidence=IDA] [GO:0000987 "core promoter proximal region
sequence-specific DNA binding" evidence=IDA] [GO:0001071 "nucleic
acid binding transcription factor activity" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO;IPI] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001205 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001706 "endoderm formation" evidence=IMP] [GO:0002244
"hematopoietic progenitor cell differentiation" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IMP] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007507 "heart development"
evidence=IMP] [GO:0030097 "hemopoiesis" evidence=IDA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0035987 "endodermal cell
differentiation" evidence=IDA] [GO:0042074 "cell migration involved
in gastrulation" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0048565 "digestive tract development"
evidence=IMP] [GO:1901533 "negative regulation of hematopoietic
progenitor cell differentiation" evidence=IDA] [GO:2000382
"positive regulation of mesoderm development" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:1351322 GO:GO:0007507 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000980 GO:GO:0000978 GO:GO:0001077 GO:GO:0000790
GO:GO:0001190 GO:GO:0048565 GO:GO:0042074 GO:GO:0002244 HSSP:P06601
GO:GO:2000382 GeneTree:ENSGT00700000104273 GO:GO:0035987 CTD:83881
eggNOG:NOG288598 HOVERGEN:HBG106595 OrthoDB:EOG4RR6J0 GO:GO:0001205
GO:GO:1901533 EMBL:AF135063 EMBL:AF154573 EMBL:AF201959
EMBL:AF447591 EMBL:BC099876 EMBL:BC099877 IPI:IPI00124691
RefSeq:NP_038757.1 UniGene:Mm.103647 ProteinModelPortal:Q9WUI0
SMR:Q9WUI0 STRING:Q9WUI0 PhosphoSite:Q9WUI0 PRIDE:Q9WUI0
Ensembl:ENSMUST00000027778 GeneID:27217 KEGG:mmu:27217
UCSC:uc007dwp.1 HOGENOM:HOG000113594 InParanoid:Q9WUI0 OMA:VFRRTRY
NextBio:305112 Bgee:Q9WUI0 CleanEx:MM_MIXL1 Genevestigator:Q9WUI0
Uniprot:Q9WUI0
Length = 231
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 39/140 (27%), Positives = 61/140 (43%)
Query: 822 SASPDGKT-PVIRRRKSTKAAKEKLNE---TENTPKRRGRPKLNTEDSNISPAKSHEGCS 877
+A P G+ P +R AA T+ P R P T + + P +G +
Sbjct: 22 AAHPGGQLLPAMRPASGLPAAPHDSRAPAATQCFPNRDSSPTAQTP-AGLDPPGPSKGSA 80
Query: 878 TPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENT 937
P + RR RTS+ E Q L F++ YP+ +E LA L S+++ WF+N
Sbjct: 81 APSAPQRRKRTSF---SSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNR 137
Query: 938 RWSFNHPSSKNAKLANSEKG 957
R S K+ + +S +G
Sbjct: 138 RAKSRRQSGKSFQPLSSRRG 157
>UNIPROTKB|F1NQK9 [details] [associations]
symbol:SIX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00540000070251 OMA:GNLSHAR
EMBL:AADN02003900 EMBL:AADN02003901 EMBL:AADN02003902
EMBL:AADN02003903 IPI:IPI00657621 Ensembl:ENSGALT00000037371
Uniprot:F1NQK9
Length = 283
Score = 121 (47.7 bits), Expect = 0.00032, P = 0.00032
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 895 EEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNHPSSKNAKLANS 954
E+ L +K+N+YP+ K +LAK GL+ +QV WF+N R +PS +K N+
Sbjct: 132 EKSRNALKELYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKRENT 191
Query: 955 EKGTCTPQSNKNTVGRVSNCNGAENVQSS 983
E +NK ++S +G++ + SS
Sbjct: 192 ENNNAA--TNKPN--QLSPLDGSKPLMSS 216
>MGI|MGI:109340 [details] [associations]
symbol:Pitx2 "paired-like homeodomain transcription factor 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO] [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=ISO] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=ISO]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=ISO] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002074 "extraocular skeletal muscle development"
evidence=IMP] [GO:0003171 "atrioventricular valve development"
evidence=IMP] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IMP] [GO:0003350
"pulmonary myocardium development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0007507 "heart development"
evidence=IGI;IMP] [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007520 "myoblast fusion" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IDA] [GO:0021763 "subthalamic
nucleus development" evidence=IMP] [GO:0021855 "hypothalamus cell
migration" evidence=IMP] [GO:0021983 "pituitary gland development"
evidence=IMP] [GO:0030324 "lung development" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
[GO:0031076 "embryonic camera-type eye development" evidence=IMP]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IGI] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IMP]
[GO:0035993 "deltoid tuberosity development" evidence=ISO;IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042476 "odontogenesis" evidence=ISO;IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043010 "camera-type
eye development" evidence=ISO] [GO:0043388 "positive regulation of
DNA binding" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0051219 "phosphoprotein binding" evidence=ISO] [GO:0055007
"cardiac muscle cell differentiation" evidence=IMP] [GO:0055009
"atrial cardiac muscle tissue morphogenesis" evidence=IMP]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IMP] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0060412 "ventricular septum morphogenesis"
evidence=IMP] [GO:0060460 "left lung morphogenesis" evidence=IMP]
[GO:0060577 "pulmonary vein morphogenesis" evidence=IMP]
[GO:0060578 "superior vena cava morphogenesis" evidence=IMP]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IMP] [GO:0061072 "iris morphogenesis" evidence=ISO]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=IMP] [GO:0070986 "left/right axis
specification" evidence=IMP] [GO:2000288 "positive regulation of
myoblast proliferation" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109340 GO:GO:0005634 GO:GO:0005737
GO:GO:0001764 GO:GO:0016055 GO:GO:0001078 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0030334 GO:GO:0000981 GO:GO:0007368
GO:GO:0001569 GO:GO:0007520 GO:GO:0048536 GO:GO:0001570
GO:GO:0035116 GO:GO:0070986 GO:GO:0031076 GO:GO:0021983
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GO:GO:0042476 GO:GO:0001105 GO:GO:0031490 GO:GO:0055015
GO:GO:0001191 GO:GO:0055009 GO:GO:0035993 GO:GO:0043388
GO:GO:0002074 GO:GO:0060460 GO:GO:0060412 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 GO:GO:0003253 GO:GO:0061325
GO:GO:0003171 GO:GO:0061072 GO:GO:2000288 GO:GO:0003350
eggNOG:NOG249113 HOVERGEN:HBG068770 GeneTree:ENSGT00700000104438
CTD:5308 KO:K04686 OMA:DMYPSYT OrthoDB:EOG4W9J4N GO:GO:0060577
GO:GO:0021763 GO:GO:0060578 GO:GO:0035886 EMBL:U80036 EMBL:U80010
EMBL:U80011 EMBL:AB006320 EMBL:AB006321 EMBL:AF048723 EMBL:AF048724
EMBL:AJ243597 EMBL:AF201091 EMBL:U70132 IPI:IPI00125578
IPI:IPI00230555 IPI:IPI00230556 IPI:IPI00885427 IPI:IPI00885862
RefSeq:NP_001035967.1 RefSeq:NP_001035969.1 RefSeq:NP_035228.2
UniGene:Mm.246804 ProteinModelPortal:P97474 SMR:P97474
IntAct:P97474 STRING:P97474 PRIDE:P97474 Ensembl:ENSMUST00000042587
Ensembl:ENSMUST00000106382 Ensembl:ENSMUST00000172645
Ensembl:ENSMUST00000174661 GeneID:18741 KEGG:mmu:18741
UCSC:uc008rhu.1 UCSC:uc008rhv.1 NextBio:294885 Bgee:P97474
CleanEx:MM_PITX2 Genevestigator:P97474
GermOnline:ENSMUSG00000028023 Uniprot:P97474
Length = 317
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 36/139 (25%), Positives = 63/139 (45%)
Query: 828 KTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHR 887
K I++ + T + K + + R P N +D G P + R+ R
Sbjct: 28 KDSEIKKVEFTDSPKSRKESASSKLFPRQHPGANEKDKGQQGKNEDVGAEDPSKKKRQRR 87
Query: 888 TSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR--WSFNHPS 945
+++ Q+L +F+ N+YP+ +T+E +A LT ++VR WF+N R W
Sbjct: 88 QRTHFTSQQL-QELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRER 145
Query: 946 SKNAKLANSEKGTCTPQSN 964
++ A+L + G PQ N
Sbjct: 146 NQQAELCKNGFG---PQFN 161
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 130 (50.8 bits), Expect = 0.00032, P = 0.00032
Identities = 47/151 (31%), Positives = 68/151 (45%)
Query: 468 GLSVEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCAGGFPKSLFDSEGQIDSEDIY- 526
G K + EKE++ S I + ++ +D + PKS S+ ++ D+Y
Sbjct: 103 GCPTPKCENEKEMK---SSIKQEPIERKDYIVENEK----EKPKSR--SKKATNAVDLYV 153
Query: 527 CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CGS + D D ++LCDG CD +H +CL PPL D+P D W CP C + +C
Sbjct: 154 CLLCGSGN---DEDRLLLCDG-CDDSYHTFCLIPPL--HDVPKGD--WRCPKCLAQ-EC- 203
Query: 586 DLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
E G D + F E A D
Sbjct: 204 SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 234
>WB|WBGene00000451 [details] [associations]
symbol:ceh-30 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0007548 eggNOG:NOG263484
EMBL:FO080757 PIR:T25610 RefSeq:NP_508524.2
ProteinModelPortal:Q22909 SMR:Q22909 STRING:Q22909 PaxDb:Q22909
PRIDE:Q22909 EnsemblMetazoa:C33D12.7 GeneID:191620
KEGG:cel:CELE_C33D12.7 UCSC:C33D12.7 CTD:191620 WormBase:C33D12.7
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 InParanoid:Q22909
OMA:MDLAHRM NextBio:949706 Uniprot:Q22909
Length = 237
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 35/148 (23%), Positives = 67/148 (45%)
Query: 819 EGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCST 878
+ +S SP K + + ++ N + ++ P+ D + SP S G
Sbjct: 26 QAASTSPCNKISSSSSFRISDILEQSPNNSSHSNDHDPSPQSIKSDFSTSPRASSPGGDR 85
Query: 879 PGSRG--RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFEN 936
GS G ++ R + ++ Q+L N+F++ +Y + + LA +GLT +QV+ W++N
Sbjct: 86 MGSPGSCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQN 145
Query: 937 TRWSFNHPSSKNAKLANSEKGTCTPQSN 964
R + ++ L SE G + N
Sbjct: 146 RRTKWKRQATSGMDLL-SEPGNLSAVQN 172
>UNIPROTKB|Q22909 [details] [associations]
symbol:ceh-30 "Homeobox protein ceh-30" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0007548 "sex differentiation" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0007548 eggNOG:NOG263484
EMBL:FO080757 PIR:T25610 RefSeq:NP_508524.2
ProteinModelPortal:Q22909 SMR:Q22909 STRING:Q22909 PaxDb:Q22909
PRIDE:Q22909 EnsemblMetazoa:C33D12.7 GeneID:191620
KEGG:cel:CELE_C33D12.7 UCSC:C33D12.7 CTD:191620 WormBase:C33D12.7
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 InParanoid:Q22909
OMA:MDLAHRM NextBio:949706 Uniprot:Q22909
Length = 237
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 35/148 (23%), Positives = 67/148 (45%)
Query: 819 EGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCST 878
+ +S SP K + + ++ N + ++ P+ D + SP S G
Sbjct: 26 QAASTSPCNKISSSSSFRISDILEQSPNNSSHSNDHDPSPQSIKSDFSTSPRASSPGGDR 85
Query: 879 PGSRG--RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFEN 936
GS G ++ R + ++ Q+L N+F++ +Y + + LA +GLT +QV+ W++N
Sbjct: 86 MGSPGSCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQN 145
Query: 937 TRWSFNHPSSKNAKLANSEKGTCTPQSN 964
R + ++ L SE G + N
Sbjct: 146 RRTKWKRQATSGMDLL-SEPGNLSAVQN 172
>UNIPROTKB|A8DZJ1 [details] [associations]
symbol:baz1b "Tyrosine-protein kinase BAZ1B" species:8355
"Xenopus laevis" [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004713 "protein tyrosine kinase activity" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016572 "histone phosphorylation" evidence=ISS] [GO:0035173
"histone kinase activity" evidence=ISS] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISS] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00297
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0006974 GO:GO:0004715
GO:GO:0004713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016585 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 PROSITE:PS50827 PROSITE:PS51136 CTD:9031 KO:K11658
GO:GO:0035173 EMBL:AM084226 EMBL:BC072944 EMBL:BC126047
RefSeq:NP_001136259.1 UniGene:Xl.16009 IntAct:A8DZJ1 PRIDE:A8DZJ1
GeneID:443594 KEGG:xla:443594 Xenbase:XB-GENE-866493 Uniprot:A8DZJ1
Length = 1441
Score = 123 (48.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 37/106 (34%), Positives = 52/106 (49%)
Query: 475 KPEKELQRATSEILRRKLKIRDL--FQRLDSLCAGGFPKSLFDSEGQIDSEDIYCAKCGS 532
K E + S + + K+ IRD F R+ L G + + + SE+ C C
Sbjct: 1104 KKMAEEAKVASAVEKWKVAIRDAQTFSRMHVLL--GMLDACI--KWDMSSENARCKVCRK 1159
Query: 533 KDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
K D+ +ILCD C++ FH +CL P L +IP D E WLCP C
Sbjct: 1160 K--GEDDKLILCD-ECNKAFHLFCLRPVLF--NIP-DGE-WLCPAC 1198
Score = 60 (26.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 818 KEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNIS 868
+E S + + + +R +S KAAK K P RRGRP N S +S
Sbjct: 1234 EEESDEEEEEQEMMGQRLRSRKAAKGK----PGRPTRRGRPPKNNTHSRVS 1280
>UNIPROTKB|F1P2X4 [details] [associations]
symbol:F1P2X4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104273 OMA:GRRAVQC EMBL:AADN02043256
IPI:IPI00821082 Ensembl:ENSGALT00000038541 ArrayExpress:F1P2X4
Uniprot:F1P2X4
Length = 214
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 30/80 (37%), Positives = 41/80 (51%)
Query: 882 RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
R RRHRT + EE Q L F +NQYP+ T+E LA + L +V WF+N R +
Sbjct: 134 RTRRHRTIFT---EEQLQALETLFHQNQYPDVITREHLANRIHLKEERVEVWFKNRRAKW 190
Query: 942 NHPSSKNAKLANSEKGTCTP 961
H +A A +G+ P
Sbjct: 191 RHQKRASAS-ALVLQGSAEP 209
>UNIPROTKB|F1LNM5 [details] [associations]
symbol:Pbx2 "Protein Pbx2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1303084
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326
GO:GO:0009954 GeneTree:ENSGT00390000016426 IPI:IPI00422030
Ensembl:ENSRNOT00000000509 Uniprot:F1LNM5
Length = 357
Score = 122 (48.0 bits), Expect = 0.00040, P = 0.00040
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 172 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 231
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 232 NIGKFQEEAN 241
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 130 (50.8 bits), Expect = 0.00040, P = 0.00040
Identities = 47/151 (31%), Positives = 68/151 (45%)
Query: 468 GLSVEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCAGGFPKSLFDSEGQIDSEDIY- 526
G K + EKE++ S I + ++ +D + PKS S+ ++ D+Y
Sbjct: 261 GCPTPKCENEKEMK---SSIKQEPIERKDYIVENEK----EKPKSR--SKKATNAVDLYV 311
Query: 527 CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CGS + D D ++LCDG CD +H +CL PPL D+P D W CP C + +C
Sbjct: 312 CLLCGSGN---DEDRLLLCDG-CDDSYHTFCLIPPL--HDVPKGD--WRCPKCLAQ-EC- 361
Query: 586 DLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
E G D + F E A D
Sbjct: 362 SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 392
>UNIPROTKB|F1PF80 [details] [associations]
symbol:PBX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 Pfam:PF00046 Pfam:PF03792 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00390000016426
EMBL:AAEX03012263 Ensembl:ENSCAFT00000021103 Uniprot:F1PF80
Length = 371
Score = 122 (48.0 bits), Expect = 0.00043, P = 0.00043
Identities = 45/153 (29%), Positives = 66/153 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LA++ G+T SQV WF N R +
Sbjct: 208 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELARKGGITVSQVSNWFGNKRIRYK- 266
Query: 944 PSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSS-KTGVDDTGCMT--GDVKNN 1000
KN E T + +T +V + S+ +G D +T GD
Sbjct: 267 ---KNMGKFQEEATIYTTKMAVDTT-KVGGLRSQASCPSTPSSGSSDPFPLTSAGDALIT 322
Query: 1001 TQECNSIKPTSQTSRKRDRDGKSGDQ-ASDPSS 1032
Q S++ T R + K G Q A+ P+S
Sbjct: 323 LQTLASLRRTPAGGSLRSQ-AKGGWQGAAPPAS 354
>ZFIN|ZDB-GENE-041010-202 [details] [associations]
symbol:baz2a "bromodomain adjacent to zinc finger
domain, 2A" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
ZFIN:ZDB-GENE-041010-202 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018501 Pfam:PF02791 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:CR450824
IPI:IPI00928777 Ensembl:ENSDART00000081773 ArrayExpress:F1QRW7
Bgee:F1QRW7 Uniprot:F1QRW7
Length = 1305
Score = 119 (46.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 49/152 (32%), Positives = 63/152 (41%)
Query: 447 LLNRINYEQNLIDAYSSEG-WKGLSVEKLKP--------EKELQRAT--SEILRRKLKIR 495
+L N E+N+ + E W V +L P E L + SEI R +R
Sbjct: 988 ILRLANLERNIERRFLKEPLWNAADVVRLAPLTPPPGGEEVPLDAVSLESEITPR---LR 1044
Query: 496 DLFQRLDSLCAGGFPKSL--FDSEGQIDSE----DIYCAKCGSKDLSADNDIILCDGACD 549
Q LD C SL E I E + C C D D ++LCDG CD
Sbjct: 1045 TWRQGLDR-CRSSSQLSLCLLQLEKAIAWERSIIKVTCQVCRKGD--DDEYLLLCDG-CD 1100
Query: 550 RGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCK 581
RG H +CL P +L+ +P D W CP C K
Sbjct: 1101 RGCHMFCLRPKVLQ--VPDGD--WFCPNCVAK 1128
Score = 62 (26.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 823 ASPDGKTPVIRR--RKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPG 880
A G++P +R R+ +K K +L E + + R + T +PA S ST
Sbjct: 1127 AKKTGESPRSQRSSRQRSKVRKRRLGEDSSDEEEGFRRSMTTRQKE-TPAPSSSSSSTSI 1185
Query: 881 SRGRRHRTSYR 891
S +R R + R
Sbjct: 1186 SPSKRRRMTTR 1196
>ZFIN|ZDB-GENE-031218-1 [details] [associations]
symbol:pbx3a "pre-B-cell leukemia transcription
factor 3a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-031218-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00390000016426
EMBL:CABZ01072032 EMBL:CABZ01072033 IPI:IPI00972671
Ensembl:ENSDART00000100074 Uniprot:F1QSN0
Length = 341
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 36/144 (25%), Positives = 57/144 (39%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ +T SQV WF N R +
Sbjct: 144 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCAITVSQVSNWFGNKRIRYKK 203
Query: 944 PSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDTGCM--TGDVKNNT 1001
K + AN + + V N S G + + +GD+ +
Sbjct: 204 NIGKFQEEANLYAAKTAVTAAQAVAAAVQNSQNNSPATPSSAGTSGSHSLPGSGDLFMSM 263
Query: 1002 QECNSIKPTSQTSRKRDRDGKSGD 1025
N ++Q + G+ GD
Sbjct: 264 SSLNGSYQSNQVTGA----GQQGD 283
>UNIPROTKB|B3DM47 [details] [associations]
symbol:pbx2 "Pre-B-cell leukemia transcription factor 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] InterPro:IPR001356
InterPro:IPR005542 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 eggNOG:NOG248144 HOGENOM:HOG000266972
GeneTree:ENSGT00390000016426 HOVERGEN:HBG000122 CTD:5089 KO:K15609
EMBL:BC167699 RefSeq:NP_001122133.1 UniGene:Str.64769
Ensembl:ENSXETT00000001072 GeneID:100101713 KEGG:xtr:100101713
Xenbase:XB-GENE-484669 Bgee:B3DM47 Uniprot:B3DM47
Length = 422
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 238 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 297
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 298 NIGKFQEEAN 307
>UNIPROTKB|F1PLX7 [details] [associations]
symbol:PBX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00390000016426 OMA:YGENLGG CTD:5089 KO:K15609
EMBL:AAEX03008226 RefSeq:XP_850252.1 Ensembl:ENSCAFT00000001223
GeneID:607695 KEGG:cfa:607695 Uniprot:F1PLX7
Length = 426
Score = 122 (48.0 bits), Expect = 0.00055, P = 0.00055
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 241 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 300
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 301 NIGKFQEEAN 310
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 128 (50.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 38/109 (34%), Positives = 52/109 (47%)
Query: 510 PKSLFDSEGQIDSEDIY-CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIP 567
PKS ++ ++ D+Y C CGS +D D ++LCDG CD +H +CL PPL D+P
Sbjct: 295 PKSR--AKKTTNAVDLYVCLLCGS---GSDEDRLLLCDG-CDDSYHTFCLIPPL--HDVP 346
Query: 568 PDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
D W CP C + +C E G D + F E A D
Sbjct: 347 KGD--WRCPKCLAQ-EC-SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 391
Score = 52 (23.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 479 ELQRATSEILRRKLKIRDLFQRLDSLCA--GGF 509
ELQ +T +I + KI DLFQ L+ L A GGF
Sbjct: 111 ELQGSTLKIPHVERKILDLFQ-LNKLVAEEGGF 142
>UNIPROTKB|F1MQ55 [details] [associations]
symbol:Bt.5205 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR005542 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0030326 GO:GO:0009954
GeneTree:ENSGT00390000016426 OMA:YGENLGG CTD:5089 EMBL:DAAA02055357
IPI:IPI00913064 RefSeq:NP_001243812.1 UniGene:Bt.5205
Ensembl:ENSBTAT00000061322 GeneID:100139739 KEGG:bta:100139739
NextBio:20790516 Uniprot:F1MQ55
Length = 430
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 305 NIGKFQEEAN 314
>UNIPROTKB|P40425 [details] [associations]
symbol:PBX2 "Pre-B-cell leukemia transcription factor 2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR005542 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CH471081 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326
GO:GO:0009954 EMBL:AL662884 EMBL:U89336 EMBL:AL845464 EMBL:BX284686
EMBL:BX927239 EMBL:CR933878 EMBL:CR812478 eggNOG:NOG248144
OMA:YGENLGG EMBL:AL662830 HOVERGEN:HBG000122 OrthoDB:EOG45HRXQ
EMBL:X59842 EMBL:X80700 EMBL:D28769 EMBL:BC082261 IPI:IPI00028416
PIR:A56002 RefSeq:NP_002577.2 UniGene:Hs.509545 UniGene:Hs.718462
ProteinModelPortal:P40425 SMR:P40425 IntAct:P40425
MINT:MINT-1032522 STRING:P40425 PhosphoSite:P40425 DMDM:1352729
PaxDb:P40425 PRIDE:P40425 DNASU:5089 Ensembl:ENST00000375050
Ensembl:ENST00000383270 Ensembl:ENST00000420432
Ensembl:ENST00000431537 Ensembl:ENST00000433552
Ensembl:ENST00000453487 Ensembl:ENST00000453961 GeneID:5089
KEGG:hsa:5089 UCSC:uc003oav.1 CTD:5089 GeneCards:GC06M032151
HGNC:HGNC:8633 MIM:176311 neXtProt:NX_P40425 PharmGKB:PA32971
InParanoid:P40425 KO:K15609 PhylomeDB:P40425 ChiTaRS:PBX2
GenomeRNAi:5089 NextBio:19624 ArrayExpress:P40425 Bgee:P40425
CleanEx:HS_PBX2 Genevestigator:P40425 GermOnline:ENSG00000204304
Uniprot:P40425
Length = 430
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 305 NIGKFQEEAN 314
>UNIPROTKB|A5A8X7 [details] [associations]
symbol:PBX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR005542 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0030326 GO:GO:0009954 EMBL:AL773562
eggNOG:NOG248144 HOGENOM:HOG000266972 GeneTree:ENSGT00390000016426
OMA:YGENLGG HOVERGEN:HBG000122 OrthoDB:EOG45HRXQ CTD:5089 KO:K15609
EMBL:CT954269 RefSeq:NP_001116629.1 UniGene:Ssc.20001
ProteinModelPortal:A5A8X7 SMR:A5A8X7 Ensembl:ENSSSCT00000001590
GeneID:100144541 KEGG:ssc:100144541 ArrayExpress:A5A8X7
Uniprot:A5A8X7
Length = 430
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 305 NIGKFQEEAN 314
>MGI|MGI:1341793 [details] [associations]
symbol:Pbx2 "pre B cell leukemia homeobox 2" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0030326 "embryonic limb morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IGI;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA]
InterPro:IPR001356 InterPro:IPR005542 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AF030001 MGI:MGI:1341793
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030326 GO:GO:0009954 eggNOG:NOG248144 HOGENOM:HOG000266972
OMA:YGENLGG HOVERGEN:HBG000122 OrthoDB:EOG45HRXQ CTD:5089 KO:K15609
EMBL:AF020198 EMBL:BC010287 EMBL:BC062147 IPI:IPI00136379
PIR:T09061 RefSeq:NP_059491.1 UniGene:Mm.390957
ProteinModelPortal:O35984 SMR:O35984 IntAct:O35984 STRING:O35984
PhosphoSite:O35984 PaxDb:O35984 PRIDE:O35984
Ensembl:ENSMUST00000038149 GeneID:18515 KEGG:mmu:18515
InParanoid:O35984 NextBio:294258 Bgee:O35984 CleanEx:MM_PBX2
Genevestigator:O35984 GermOnline:ENSMUSG00000034673 Uniprot:O35984
Length = 430
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 305 NIGKFQEEAN 314
>RGD|1303084 [details] [associations]
symbol:Pbx2 "pre-B-cell leukemia homeobox 2" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009954 "proximal/distal pattern formation" evidence=ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] InterPro:IPR001356
InterPro:IPR005542 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1303084 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:BX883044 eggNOG:NOG248144
HOGENOM:HOG000266972 HSSP:P40424 HOVERGEN:HBG000122
OrthoDB:EOG45HRXQ CTD:5089 KO:K15609 IPI:IPI00422030
RefSeq:NP_001002828.1 UniGene:Rn.901 ProteinModelPortal:Q6MG87
SMR:Q6MG87 STRING:Q6MG87 GeneID:406164 KEGG:rno:406164
UCSC:RGD:1303084 NextBio:696077 Genevestigator:Q6MG87
Uniprot:Q6MG87
Length = 430
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 305 NIGKFQEEAN 314
>UNIPROTKB|Q9BYU1 [details] [associations]
symbol:PBX4 "Pre-B-cell leukemia transcription factor 4"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IC] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IC]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IC] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006366 EMBL:CH471106 GO:GO:0001741 eggNOG:NOG248144
HOGENOM:HOG000266972 HOVERGEN:HBG000122 OrthoDB:EOG45HRXQ
EMBL:AK097427 EMBL:BC033067 EMBL:BC141859 EMBL:AJ300182
IPI:IPI00019294 RefSeq:NP_079521.1 UniGene:Hs.466257
ProteinModelPortal:Q9BYU1 SMR:Q9BYU1 STRING:Q9BYU1
PhosphoSite:Q9BYU1 DMDM:122065777 PaxDb:Q9BYU1 PRIDE:Q9BYU1
Ensembl:ENST00000251203 GeneID:80714 KEGG:hsa:80714 UCSC:uc002nmy.3
CTD:80714 GeneCards:GC19M019672 HGNC:HGNC:13403 HPA:HPA049859
MIM:608127 neXtProt:NX_Q9BYU1 PharmGKB:PA32973 InParanoid:Q9BYU1
KO:K15611 OMA:FYSHLNN PhylomeDB:Q9BYU1 GenomeRNAi:80714
NextBio:71019 Bgee:Q9BYU1 CleanEx:HS_PBX4 Genevestigator:Q9BYU1
GermOnline:ENSG00000105717 Uniprot:Q9BYU1
Length = 374
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 32/101 (31%), Positives = 45/101 (44%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LA++ GLT SQV WF N R +
Sbjct: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENVQSS 983
K + A G T + G ++C + SS
Sbjct: 271 NMGKFQEEATIYTGKTAVDTTEVGVPGNHASCLSTPSSGSS 311
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 129 (50.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 39/109 (35%), Positives = 52/109 (47%)
Query: 510 PKSLFDSEGQIDSEDIY-CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIP 567
PKS S+ ++ D+Y C CGS + D D ++LCDG CD +H +CL PPL D+P
Sbjct: 228 PKSR--SKKTTNAVDLYVCLLCGSGN---DEDRLLLCDG-CDDSYHTFCLIPPL--HDVP 279
Query: 568 PDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
D W CP C + +C E G D + F E A D
Sbjct: 280 KGD--WRCPKCLAQ-EC-SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 324
Score = 52 (23.4 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 479 ELQRATSEILRRKLKIRDLFQRLDSLCA--GGF 509
ELQ +T +I + KI DLFQ L+ L A GGF
Sbjct: 44 ELQGSTLKIPHVERKILDLFQ-LNKLVAEEGGF 75
>UNIPROTKB|F8VSK3 [details] [associations]
symbol:PBX2 "Pre-B-cell leukemia transcription factor 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL845464 EMBL:BX284686 EMBL:BX927239 EMBL:CR812478
EMBL:AL662830 HGNC:HGNC:8633 ChiTaRS:PBX2 IPI:IPI01022892
SMR:F8VSK3 Ensembl:ENST00000547363 Ensembl:ENST00000548572
Ensembl:ENST00000549969 Ensembl:ENST00000550532
Ensembl:ENST00000551389 Uniprot:F8VSK3
Length = 438
Score = 122 (48.0 bits), Expect = 0.00057, P = 0.00057
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 245 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 304
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 305 NIGKFQEEAN 314
>UNIPROTKB|H0YI03 [details] [associations]
symbol:PBX2 "Pre-B-cell leukemia transcription factor 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL845464 EMBL:BX284686 EMBL:BX927239 EMBL:CR933878
EMBL:CR812478 EMBL:AL662830 HGNC:HGNC:8633 ChiTaRS:PBX2 SMR:H0YI03
Ensembl:ENST00000549520 Ensembl:ENST00000549894
Ensembl:ENST00000550227 Ensembl:ENST00000551651
Ensembl:ENST00000553136 Ensembl:ENST00000553184 Uniprot:H0YI03
Length = 443
Score = 122 (48.0 bits), Expect = 0.00058, P = 0.00058
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 258 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 317
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 318 NIGKFQEEAN 327
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 128 (50.1 bits), Expect = 0.00066, P = 0.00066
Identities = 48/151 (31%), Positives = 69/151 (45%)
Query: 468 GLSVEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCAGGFPKSLFDSEGQIDSEDIY- 526
G + K + EKE++ S I + + +D L+S PKS ++ + D+Y
Sbjct: 261 GCATPKRENEKEVK---STIKQEPTEKKDCV--LESEKDKDKPKSR--AKKTATAVDLYV 313
Query: 527 CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CGS + D D ++LCDG CD +H +CL PPL D+P D W CP C + +C
Sbjct: 314 CLLCGSGN---DEDRLLLCDG-CDDSYHTFCLLPPL--HDVPKGD--WRCPKCLAQ-EC- 363
Query: 586 DLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
E G D + F E A D
Sbjct: 364 SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 394
>UNIPROTKB|K7GSR9 [details] [associations]
symbol:MTF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 InterPro:IPR002999 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 SMART:SM00333
GeneTree:ENSGT00390000009222 EMBL:CU151850 EMBL:CU468387
Ensembl:ENSSSCT00000034081 Uniprot:K7GSR9
Length = 161
Score = 109 (43.4 bits), Expect = 0.00067, P = 0.00067
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 518 GQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPG 577
G S ++ C C + A N++++CD C +G+HQ C P + + DE WLC
Sbjct: 96 GATGSGEMVCTICQEEYSEAPNEMVICD-KCGQGYHQLC-HTPHIDSSVIDSDEKWLCRQ 153
Query: 578 C 578
C
Sbjct: 154 C 154
>UNIPROTKB|Q96T88 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IDA] [GO:0008327 "methyl-CpG
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0016574 "histone ubiquitination" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000791 "euchromatin" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0005657 "replication fork" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=ISS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0044729 "hemi-methylated DNA-binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000373
"positive regulation of DNA topoisomerase (ATP-hydrolyzing)
activity" evidence=IC] [GO:0032270 "positive regulation of cellular
protein metabolic process" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IC] [GO:0031493 "nucleosomal histone binding"
evidence=ISS] [GO:0010390 "histone monoubiquitination"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=IEP] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0006281 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 GO:GO:0042802
EMBL:CH471139 GO:GO:0000987 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0032270
GO:GO:0004842 GO:GO:0016363 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0010390 GO:GO:0031493
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
GO:GO:0008327 PDB:3T6R PDBsum:3T6R PDB:3DB3 PDBsum:3DB3 PDB:3ASK
PDB:3ASL PDB:4GY5 PDBsum:3ASK PDBsum:3ASL PDBsum:4GY5
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:AC027319
GO:GO:2000373 CTD:29128 HOGENOM:HOG000124662 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:AF129507
EMBL:AB177623 EMBL:AB177624 EMBL:AB075601 EMBL:AF274048
EMBL:EF560733 EMBL:AK025578 EMBL:AK289389 EMBL:AK314579
EMBL:AY787925 EMBL:AC053467 EMBL:BC113875 IPI:IPI00797945
RefSeq:NP_001041666.1 RefSeq:NP_037414.3 UniGene:Hs.108106 PDB:2FAZ
PDB:2L3R PDB:2LGG PDB:2LGK PDB:2LGL PDB:2PB7 PDB:3BI7 PDB:3CLZ
PDB:3DB4 PDB:3DWH PDB:3FL2 PDB:3SHB PDB:3SOU PDB:3SOW PDB:3SOX
PDB:3ZVY PDB:3ZVZ PDBsum:2FAZ PDBsum:2L3R PDBsum:2LGG PDBsum:2LGK
PDBsum:2LGL PDBsum:2PB7 PDBsum:3BI7 PDBsum:3CLZ PDBsum:3DB4
PDBsum:3DWH PDBsum:3FL2 PDBsum:3SHB PDBsum:3SOU PDBsum:3SOW
PDBsum:3SOX PDBsum:3ZVY PDBsum:3ZVZ ProteinModelPortal:Q96T88
SMR:Q96T88 IntAct:Q96T88 MINT:MINT-2815626 STRING:Q96T88
PhosphoSite:Q96T88 DMDM:67462077 PaxDb:Q96T88 PRIDE:Q96T88
DNASU:29128 Ensembl:ENST00000262952 Ensembl:ENST00000398240
Ensembl:ENST00000455180 GeneID:29128 KEGG:hsa:29128 UCSC:uc002mbo.3
GeneCards:GC19P004910 HGNC:HGNC:12556 HPA:HPA049408 MIM:607990
neXtProt:NX_Q96T88 PharmGKB:PA37196 InParanoid:Q96T88
OrthoDB:EOG408N7M EvolutionaryTrace:Q96T88 GenomeRNAi:29128
NextBio:52244 ArrayExpress:Q96T88 CleanEx:HS_UHRF1
Genevestigator:Q96T88 GermOnline:ENSG00000034063 Uniprot:Q96T88
Length = 793
Score = 129 (50.5 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG + D + +CD CD FH YCL+PPL +P +DE W CP +C+ D +
Sbjct: 318 CHLCGGRQ-DPDKQL-MCD-ECDMAFHIYCLDPPL--SSVPSEDE-WYCP--ECRNDASE 369
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLA 622
+V L G RL + K+ A + +D G+A
Sbjct: 370 VV--LAGERLRESKKKAKM-ASATSSSQRDWGKGMA 402
Score = 45 (20.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTPVIRRRKST-KAAKEKLNETENTPKRRGRP 858
G PR+ +K TK + ++ +IR KS K E L ++ P G P
Sbjct: 660 GSPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPAS-GSP 710
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 128 (50.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 38/109 (34%), Positives = 52/109 (47%)
Query: 510 PKSLFDSEGQIDSEDIY-CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIP 567
PKS ++ ++ D+Y C CGS +D D ++LCDG CD +H +CL PPL D+P
Sbjct: 236 PKSR--AKKTTNAVDLYVCLLCGS---GSDEDRLLLCDG-CDDSYHTFCLIPPL--HDVP 287
Query: 568 PDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEAAAGHNQD 616
D W CP C + +C E G D + F E A D
Sbjct: 288 KGD--WRCPKCLAQ-EC-SKPQEAFGFEQAARDYTLRTFGEMADAFKSD 332
Score = 52 (23.4 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 479 ELQRATSEILRRKLKIRDLFQRLDSLCA--GGF 509
ELQ +T +I + KI DLFQ L+ L A GGF
Sbjct: 52 ELQGSTLKIPHVERKILDLFQ-LNKLVAEEGGF 83
>UNIPROTKB|D6RFI4 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 EMBL:AC017068
HOGENOM:HOG000273886 HGNC:HGNC:9005 ChiTaRS:PITX2 IPI:IPI00968016
ProteinModelPortal:D6RFI4 SMR:D6RFI4 Ensembl:ENST00000511837
ArrayExpress:D6RFI4 Bgee:D6RFI4 Uniprot:D6RFI4
Length = 290
Score = 118 (46.6 bits), Expect = 0.00073, P = 0.00073
Identities = 37/143 (25%), Positives = 68/143 (47%)
Query: 824 SPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRG 883
S D + + S ++ KE + ++ P++ P N +D + G P +
Sbjct: 27 SKDSEIKKVEFTDSPESRKEAAS-SKFFPRQH--PGANEKDKSQQGKNEDVGAEDPSKKK 83
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR--WSF 941
R+ R +++ Q+L +F+ N+YP+ +T+E +A LT ++VR WF+N R W
Sbjct: 84 RQRRQRTHFTSQQL-QELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR- 141
Query: 942 NHPSSKNAKLANSEKGTCTPQSN 964
++ A+L + G PQ N
Sbjct: 142 KRERNQQAELCKNGFG---PQFN 161
>FB|FBgn0000611 [details] [associations]
symbol:exd "extradenticle" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS;IMP] [GO:0005667
"transcription factor complex" evidence=IDA;IPI] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0005634 "nucleus"
evidence=NAS;IDA;TAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA;IMP]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0001654 "eye development" evidence=IMP]
[GO:0007422 "peripheral nervous system development" evidence=IMP]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0007479 "leg disc
proximal/distal pattern formation" evidence=TAS] [GO:0007420 "brain
development" evidence=IMP] [GO:0007432 "salivary gland boundary
specification" evidence=NAS;TAS] [GO:0007438 "oenocyte development"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042659 "regulation of cell fate specification"
evidence=IMP] [GO:0007525 "somatic muscle development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03792
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005737
GO:GO:0007420 EMBL:AE014298 GO:GO:0043565 GO:GO:0045944
GO:GO:0007422 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0007438 GO:GO:0003713 GO:GO:0000060
GO:GO:0007479 GO:GO:0001654 GO:GO:0007432 eggNOG:NOG248144
KO:K09355 OrthoDB:EOG4RV16Z EMBL:U33747 EMBL:L19295 EMBL:AY061065
EMBL:Z18864 PIR:A48840 RefSeq:NP_523360.1 RefSeq:NP_727923.1
RefSeq:NP_727924.1 UniGene:Dm.174 PDB:1B8I PDB:2R5Y PDB:2R5Z
PDBsum:1B8I PDBsum:2R5Y PDBsum:2R5Z ProteinModelPortal:P40427
SMR:P40427 DIP:DIP-18773N IntAct:P40427 MINT:MINT-86818
STRING:P40427 PaxDb:P40427 PRIDE:P40427 EnsemblMetazoa:FBtr0074135
EnsemblMetazoa:FBtr0074136 EnsemblMetazoa:FBtr0074137
EnsemblMetazoa:FBtr0333322 EnsemblMetazoa:FBtr0333323 GeneID:32567
KEGG:dme:Dmel_CG8933 UCSC:CG8933-RA CTD:32567 FlyBase:FBgn0000611
GeneTree:ENSGT00390000016426 InParanoid:P40427 OMA:YGENLGG
PhylomeDB:P40427 ChiTaRS:exd EvolutionaryTrace:P40427
GenomeRNAi:32567 NextBio:779186 Bgee:P40427 GermOnline:CG8933
Uniprot:P40427
Length = 376
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LA++ G+T SQV WF N R +
Sbjct: 239 RRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKK 298
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 299 NIGKAQEEAN 308
>UNIPROTKB|Q29CT2 [details] [associations]
symbol:exd "Homeobox protein extradenticle" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0000060 "protein
import into nucleus, translocation" evidence=ISS] [GO:0001654 "eye
development" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0007422 "peripheral
nervous system development" evidence=ISS] InterPro:IPR001356
InterPro:IPR005542 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0003677 GO:GO:0043565 GO:GO:0007422
GO:GO:0003700 GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000060 GO:GO:0001654
eggNOG:NOG248144 KO:K09355 OrthoDB:EOG4RV16Z OMA:YGENLGG
EMBL:CH475411 RefSeq:XP_001352352.1 ProteinModelPortal:Q29CT2
SMR:Q29CT2 GeneID:4811784 KEGG:dpo:Dpse_GA21419 FlyBase:FBgn0081406
InParanoid:Q29CT2 Uniprot:Q29CT2
Length = 376
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LA++ G+T SQV WF N R +
Sbjct: 239 RRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKK 298
Query: 944 PSSKNAKLAN 953
K + AN
Sbjct: 299 NIGKAQEEAN 308
>TAIR|locus:2144841 [details] [associations]
symbol:ATXR5 "AT5G09790" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009555 "pollen
development" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IEP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0046976 "histone methyltransferase activity
(H3-K27 specific)" evidence=IDA] [GO:0070734 "histone H3-K27
methylation" evidence=IDA] [GO:0006275 "regulation of DNA
replication" evidence=IGI] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 SMART:SM00249 SMART:SM00317 GO:GO:0005634
EMBL:CP002688 GO:GO:0009507 GO:GO:0006275 GO:GO:0009555
GO:GO:0046872 GO:GO:0008270 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0009294 GO:GO:0046976
IPI:IPI00775647 RefSeq:NP_001078559.1 UniGene:At.27076
ProteinModelPortal:F4KFB9 SMR:F4KFB9 PRIDE:F4KFB9
EnsemblPlants:AT5G09790.2 GeneID:830839 KEGG:ath:AT5G09790
OMA:TFIAEYT ArrayExpress:F4KFB9 Uniprot:F4KFB9
Length = 379
Score = 120 (47.3 bits), Expect = 0.00074, P = 0.00074
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 515 DSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWL 574
+ E + ++ C KCGS + D++++LCD CDRGFH CL P +++ I WL
Sbjct: 55 EEEDEDSYSNVTCEKCGSGE--GDDELLLCD-KCDRGFHMKCLRPIVVRVPIGT----WL 107
Query: 575 CPGC 578
C C
Sbjct: 108 CVDC 111
>UNIPROTKB|O93385 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IEA] [GO:0001569
"patterning of blood vessels" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002074 "extraocular skeletal muscle development"
evidence=IEA] [GO:0003171 "atrioventricular valve development"
evidence=IEA] [GO:0003253 "cardiac neural crest cell migration
involved in outflow tract morphogenesis" evidence=IEA] [GO:0003350
"pulmonary myocardium development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0021763 "subthalamic nucleus development"
evidence=IEA] [GO:0021855 "hypothalamus cell migration"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031076 "embryonic camera-type eye development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035886 "vascular smooth muscle cell differentiation"
evidence=IEA] [GO:0035993 "deltoid tuberosity development"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0048536
"spleen development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0051219 "phosphoprotein
binding" evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060460 "left lung
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=IEA] [GO:0061072 "iris morphogenesis"
evidence=IEA] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=IEA] [GO:0070986 "left/right axis
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0061184 "positive regulation of dermatome development"
evidence=IDA] [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IDA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IDA] [GO:2000287 "positive regulation of
myotome development" evidence=IDA] [GO:2000288 "positive regulation
of myoblast proliferation" evidence=IDA] [GO:0007368 "determination
of left/right symmetry" evidence=IEP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR016233 InterPro:IPR017970
Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0016055 GO:GO:0001078
GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030334 GO:GO:0030326 GO:GO:0007368 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0001105
GO:GO:0031490 GO:GO:0001191 GO:GO:0045663 GO:GO:0043388
GO:GO:2000288 eggNOG:NOG249113 HOVERGEN:HBG068770 EMBL:AF076640
EMBL:AF077092 EMBL:AF063935 IPI:IPI00573554 IPI:IPI00602044
PIR:JW0097 RefSeq:NP_990341.1 UniGene:Gga.3398
ProteinModelPortal:O93385 SMR:O93385 STRING:O93385 GeneID:395862
KEGG:gga:395862 CTD:5308 KO:K04686 NextBio:20815929 GO:GO:0061184
GO:GO:2000287 Uniprot:O93385
Length = 333
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 38/132 (28%), Positives = 61/132 (46%)
Query: 835 RKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLG 894
R S +AAK +L +T P+ E KS + S+ +R R
Sbjct: 53 RSSLEAAKHRLEV--HTISDTSSPEA-AEKEKSQQGKSEDAGPEDPSKKKRQRRQRTHFT 109
Query: 895 EEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR--WSFNHPSSKNAKLA 952
+ Q+L +F+ N+YP+ +T+E +A LT ++VR WF+N R W ++ A+L
Sbjct: 110 SQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAELC 168
Query: 953 NSEKGTCTPQSN 964
+ G PQ N
Sbjct: 169 KNGFG---PQFN 177
>ZFIN|ZDB-GENE-980528-2060 [details] [associations]
symbol:gsc "goosecoid" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEP] [GO:0007420
"brain development" evidence=IGI] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=IGI] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI;IDA] [GO:0009948
"anterior/posterior axis specification" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980528-2060 GO:GO:0005634 GO:GO:0007420 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009948
GO:GO:0009950 GO:GO:0021999 HOVERGEN:HBG005921 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AL772209 IPI:IPI00487794
UniGene:Dr.289 SMR:Q7ZZR4 Ensembl:ENSDART00000082085
InParanoid:Q7ZZR4 Uniprot:Q7ZZR4
Length = 240
Score = 116 (45.9 bits), Expect = 0.00075, P = 0.00075
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 882 RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
R RRHRT + +E + L N F+E +YP+ T+E LA+++ L +V WF+N R +
Sbjct: 145 RKRRHRTIFT---DEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKW 201
Query: 942 NHPS-SKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQS 982
S + + NS+K +S K T ++ G +V S
Sbjct: 202 RRQKRSSSEESENSQKWN---KSTKTTSEKIEE--GKSDVDS 238
>UNIPROTKB|H9L038 [details] [associations]
symbol:PBX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001741 "XY body" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR005542
InterPro:IPR009057 Pfam:PF00046 Pfam:PF03792 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00390000016426
EMBL:AADN02053378 EMBL:AADN02053379 Ensembl:ENSGALT00000021886
OMA:YEELSGS Uniprot:H9L038
Length = 416
Score = 128 (50.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 33/103 (32%), Positives = 46/103 (44%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 224 RRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKGGITVSQVSNWFGNKRIRYKK 283
Query: 944 PSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTG 986
K + AN T N V + + N S+ +G
Sbjct: 284 NMGKFQEEANIYAAK-TAVDATNVVAQGNRANSPSTPNSASSG 325
Score = 38 (18.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 808 GGPRKRTKSTKEGSSASPDGKTP 830
GGP T + + S+ P G P
Sbjct: 9 GGPTAPTATPGDPSAVPPPGPPP 31
>UNIPROTKB|Q9GLL9 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9823 "Sus scrofa" [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048850 "hypophysis
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001568
GO:GO:0009953 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 CTD:5626 HOVERGEN:HBG053691 KO:K09327
GO:GO:0048850 OMA:TCFPHPY EMBL:AF232676 EMBL:AB187272 EMBL:EF188259
RefSeq:NP_001001263.1 UniGene:Ssc.15921 UniGene:Ssc.86965
ProteinModelPortal:Q9GLL9 SMR:Q9GLL9 Ensembl:ENSSSCT00000028015
GeneID:397280 KEGG:ssc:397280 Uniprot:Q9GLL9
Length = 226
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 856 GRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTT 915
GRP+L SP G P SR RRHRT++ E +L ++F NQYP+
Sbjct: 52 GRPRL-------SPQGGQRG--RPHSR-RRHRTTFSPAQLE---QLESAFGRNQYPDIWA 98
Query: 916 KESLAKELGLTFSQVRKWFENTR 938
+E LA++ GL+ ++++ WF+N R
Sbjct: 99 REGLARDTGLSEARIQVWFQNRR 121
>CGD|CAL0003187 [details] [associations]
symbol:MTLA1 species:5476 "Candida albicans" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0007531 "mating
type determination" evidence=IGI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0031138 "negative regulation of conjugation with
cellular fusion" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007532
"regulation of mating-type specific transcription, DNA-dependent"
evidence=IEA] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009405
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 EMBL:AACQ01000100
GO:GO:1900239 GO:GO:0036166 GO:GO:0031138 EMBL:AF167162
RefSeq:XP_714617.1 STRING:Q9UW23 GeneID:3643729 KEGG:cal:CaO19.3201
eggNOG:NOG18819 GO:GO:0007531 Uniprot:Q9UW23
Length = 210
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 880 GSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRW 939
G ++ + ++L + L F++N+ PNR +E +A++ G++ SQ+R WF N R
Sbjct: 135 GEEIKKSKKKRQRLDNSTKEFLEKVFEKNKQPNRRERELIAEKHGVSLSQIRVWFTNKRM 194
Query: 940 SFNHPSSKNAKLANS 954
P SK +NS
Sbjct: 195 RKKEPKSKAKSSSNS 209
>UNIPROTKB|Q9UW23 [details] [associations]
symbol:MTLA1 "Mating-type-like protein A1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IMP] [GO:0007531 "mating type determination"
evidence=IGI] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0031138
"negative regulation of conjugation with cellular fusion"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009405
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 EMBL:AACQ01000100
GO:GO:1900239 GO:GO:0036166 GO:GO:0031138 EMBL:AF167162
RefSeq:XP_714617.1 STRING:Q9UW23 GeneID:3643729 KEGG:cal:CaO19.3201
eggNOG:NOG18819 GO:GO:0007531 Uniprot:Q9UW23
Length = 210
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 880 GSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRW 939
G ++ + ++L + L F++N+ PNR +E +A++ G++ SQ+R WF N R
Sbjct: 135 GEEIKKSKKKRQRLDNSTKEFLEKVFEKNKQPNRRERELIAEKHGVSLSQIRVWFTNKRM 194
Query: 940 SFNHPSSKNAKLANS 954
P SK +NS
Sbjct: 195 RKKEPKSKAKSSSNS 209
>FB|FBgn0010323 [details] [associations]
symbol:Gsc "Goosecoid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;ISS;NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 EMBL:AE014134
GO:GO:0001078 GO:GO:0043565 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:145258 eggNOG:NOG247162 KO:K09324 EMBL:X95420 EMBL:U52968
PIR:S70617 RefSeq:NP_476949.1 UniGene:Dm.4841
ProteinModelPortal:P54366 SMR:P54366 IntAct:P54366 MINT:MINT-314608
STRING:P54366 PRIDE:P54366 GeneID:33240 KEGG:dme:Dmel_CG2851
FlyBase:FBgn0010323 HOGENOM:HOG000276707 InParanoid:P54366
OrthoDB:EOG4RV17N GenomeRNAi:33240 NextBio:782613 Bgee:P54366
GermOnline:CG2851 Uniprot:P54366
Length = 419
Score = 120 (47.3 bits), Expect = 0.00088, P = 0.00088
Identities = 35/115 (30%), Positives = 55/115 (47%)
Query: 872 SHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVR 931
SH G P R RRHRT + EE ++L +F + YP+ +E LA ++ L +V
Sbjct: 275 SHLGHGPPPKRKRRHRTIFT---EEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVE 331
Query: 932 KWFENTR--W--SFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNC-NGAENVQ 981
WF+N R W + KL + G+ T + ++ G S+ NG+ V+
Sbjct: 332 VWFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVK 386
>UNIPROTKB|Q99697 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001569 "patterning
of blood vessels" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002074 "extraocular skeletal muscle development" evidence=IEA]
[GO:0003171 "atrioventricular valve development" evidence=IEA]
[GO:0003350 "pulmonary myocardium development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0021763 "subthalamic
nucleus development" evidence=IEA] [GO:0021855 "hypothalamus cell
migration" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031076 "embryonic camera-type eye development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0033189 "response to vitamin A" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035886
"vascular smooth muscle cell differentiation" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0055015 "ventricular cardiac
muscle cell development" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060460 "left lung
morphogenesis" evidence=IEA] [GO:0060577 "pulmonary vein
morphogenesis" evidence=IEA] [GO:0060578 "superior vena cava
morphogenesis" evidence=IEA] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=IEA] [GO:2000288 "positive regulation
of myoblast proliferation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007368
"determination of left/right symmetry" evidence=ISS] [GO:0001102
"RNA polymerase II activating transcription factor binding"
evidence=IPI] [GO:0048536 "spleen development" evidence=ISS]
[GO:0070986 "left/right axis specification" evidence=ISS]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0061072
"iris morphogenesis" evidence=IMP] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001105 "RNA polymerase
II transcription coactivator activity" evidence=IDA] [GO:0060127
"prolactin secreting cell differentiation" evidence=TAS]
[GO:0060126 "somatotropin secreting cell differentiation"
evidence=TAS] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0042476 "odontogenesis" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0043021 "ribonucleoprotein complex
binding" evidence=IC] [GO:0051219 "phosphoprotein binding"
evidence=IPI] [GO:0061325 "cell proliferation involved in outflow
tract morphogenesis" evidence=ISS] [GO:0035993 "deltoid tuberosity
development" evidence=IMP] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IDA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IPI]
[GO:0035315 "hair cell differentiation" evidence=IC]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0001764 GO:GO:0016055 GO:GO:0001078 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0030334 GO:GO:0000981
GO:GO:0007368 GO:GO:0001569 GO:GO:0007520 GO:GO:0048536
EMBL:CH471057 GO:GO:0001570 GO:GO:0035116 GO:GO:0070986
GO:GO:0031076 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GO:GO:0042476 GO:GO:0001105 GO:GO:0043021
GO:GO:0031490 GO:GO:0055015 GO:GO:0001191 GO:GO:0055009
GO:GO:0035993 GO:GO:0043388 GO:GO:0002074 GO:GO:0060460
GO:GO:0060412 MIM:604229 Orphanet:708 GO:GO:0035315 GO:GO:0048557
GO:GO:0061031 GO:GO:0021855 Orphanet:98978 Orphanet:782
Orphanet:91483 GO:GO:0003253 GO:GO:0061325 GO:GO:0003171
GO:GO:0061072 GO:GO:2000288 GO:GO:0003350 eggNOG:NOG249113
HOVERGEN:HBG068770 CTD:5308 KO:K04686 OMA:DMYPSYT EMBL:U69961
EMBL:AF048720 EMBL:AF048721 EMBL:AF048722 EMBL:AF238048
EMBL:AK127829 EMBL:AK313987 EMBL:BC013998 EMBL:BC106010
IPI:IPI00017093 IPI:IPI00220801 IPI:IPI00220802 RefSeq:NP_000316.2
RefSeq:NP_001191326.1 RefSeq:NP_001191327.1 RefSeq:NP_001191328.1
RefSeq:NP_700475.1 RefSeq:NP_700476.1 UniGene:Hs.643588
UniGene:Hs.738484 PDB:2L7F PDB:2L7M PDB:2LKX PDBsum:2L7F
PDBsum:2L7M PDBsum:2LKX ProteinModelPortal:Q99697 SMR:Q99697
IntAct:Q99697 STRING:Q99697 DMDM:6174907 PRIDE:Q99697 DNASU:5308
Ensembl:ENST00000306732 Ensembl:ENST00000354925
Ensembl:ENST00000355080 Ensembl:ENST00000394598 GeneID:5308
KEGG:hsa:5308 UCSC:uc003iac.3 UCSC:uc003iad.3 UCSC:uc003iae.3
GeneCards:GC04M111538 HGNC:HGNC:9005 MIM:137600 MIM:180500
MIM:180550 MIM:601542 neXtProt:NX_Q99697 Orphanet:91481
PharmGKB:PA33339 OrthoDB:EOG4W9J4N ChiTaRS:PITX2
EvolutionaryTrace:Q99697 GenomeRNAi:5308 NextBio:20518
ArrayExpress:Q99697 Bgee:Q99697 CleanEx:HS_PITX2
Genevestigator:Q99697 GermOnline:ENSG00000164093 GO:GO:0060127
GO:GO:0060577 GO:GO:0060126 GO:GO:0021763 GO:GO:0060578
GO:GO:0035886 Uniprot:Q99697
Length = 317
Score = 118 (46.6 bits), Expect = 0.00088, P = 0.00088
Identities = 37/143 (25%), Positives = 68/143 (47%)
Query: 824 SPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRG 883
S D + + S ++ KE + ++ P++ P N +D + G P +
Sbjct: 27 SKDSEIKKVEFTDSPESRKEAAS-SKFFPRQH--PGANEKDKSQQGKNEDVGAEDPSKKK 83
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR--WSF 941
R+ R +++ Q+L +F+ N+YP+ +T+E +A LT ++VR WF+N R W
Sbjct: 84 RQRRQRTHFTSQQL-QELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR- 141
Query: 942 NHPSSKNAKLANSEKGTCTPQSN 964
++ A+L + G PQ N
Sbjct: 142 KRERNQQAELCKNGFG---PQFN 161
>ZFIN|ZDB-GENE-070424-11 [details] [associations]
symbol:zgc:158824 "zgc:158824" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR005542 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03792 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-070424-11 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00390000016426 EMBL:CABZ01077136 EMBL:CABZ01077137
EMBL:CABZ01077138 EMBL:CABZ01077139 EMBL:CABZ01077140
EMBL:CABZ01077141 EMBL:CABZ01077142 EMBL:CABZ01077143
EMBL:CABZ01077144 EMBL:CABZ01077145 EMBL:CABZ01077146
EMBL:CABZ01077147 EMBL:CABZ01077148 EMBL:CABZ01077149
EMBL:CABZ01077150 EMBL:CABZ01077151 IPI:IPI00508596
Ensembl:ENSDART00000125538 Ensembl:ENSDART00000129503
Uniprot:F1QSY5
Length = 429
Score = 120 (47.3 bits), Expect = 0.00092, P = 0.00091
Identities = 34/123 (27%), Positives = 53/123 (43%)
Query: 884 RRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNH 943
RR R ++ K E+ + + S N YP+ KE LAK+ +T SQV WF N R +
Sbjct: 233 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKK 292
Query: 944 PSSKNAKLANSEKG-TCTPQSNKNTVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKNNTQ 1002
K + AN T ++ + G +N N S + + +GD+ + Q
Sbjct: 293 NIGKFQEEANMYAARTAVNAASVSAHGSQANSPSTPNSAGSAGSFNMSN--SGDLFMSVQ 350
Query: 1003 ECN 1005
N
Sbjct: 351 SLN 353
>UNIPROTKB|F1PP15 [details] [associations]
symbol:RHOXF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0019953
"sexual reproduction" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0019953 OMA:NKRARCR
GeneTree:ENSGT00530000063899 EMBL:AAEX03026834
Ensembl:ENSCAFT00000029306 Uniprot:F1PP15
Length = 182
Score = 111 (44.1 bits), Expect = 0.00097, P = 0.00097
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 863 EDSNISPAKSHEGCSTPGSRGRRHRTSYR-KLGEEVTQKLYNSFKENQYPNRTTKESLAK 921
E ++P + + + + RR R + R K + Q+L ++F+ QYP+ T++ LA+
Sbjct: 77 ELGQLAPEELPQAVAARAPQPRRRRRAQRNKFTQVQVQELESAFQHTQYPDVLTRQELAR 136
Query: 922 ELGLTFSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKN 966
+ +T +V+ WF+N R + + +KL N TP +N N
Sbjct: 137 RMDVTEIRVQVWFKNRRAKYKR-DERASKLRN------TPPTNLN 174
>UNIPROTKB|H9L1U3 [details] [associations]
symbol:H9L1U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00610000086217 EMBL:AADN02076603
Ensembl:ENSGALT00000035653 OMA:FREQRYI Uniprot:H9L1U3
Length = 119
Score = 97 (39.2 bits), Expect = 0.00098, P = 0.00098
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 868 SPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTF 927
SPA HE + G G R RT + + Q+L SF+E +Y + K LA L L+
Sbjct: 46 SPA--HE--AEAGG-GARPRTKFSAVQ---LQELERSFREQRYIGASEKRRLAAALDLSQ 97
Query: 928 SQVRKWFENTRWSF 941
SQ++ WF+N R F
Sbjct: 98 SQIKTWFQNRRMKF 111
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.126 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1063 972 0.00097 122 3 11 23 0.38 35
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 120
No. of states in DFA: 621 (66 KB)
Total size of DFA: 461 KB (2216 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 100.04u 0.13s 100.17t Elapsed: 00:00:05
Total cpu time: 100.06u 0.13s 100.19t Elapsed: 00:00:05
Start: Mon May 20 21:18:51 2013 End: Mon May 20 21:18:56 2013
WARNINGS ISSUED: 1