BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001512
(1063 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04996|HAT31_ARATH Homeobox protein HAT3.1 OS=Arabidopsis thaliana GN=HAT3.1 PE=2 SV=3
Length = 723
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 295/637 (46%), Positives = 367/637 (57%), Gaps = 95/637 (14%)
Query: 413 VNSIGERKQKKRNKIRRKKIVA--DEYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLS 470
NS + KK+NK K V DEY+RI+ LRY LNRINYEQ+LIDAYS EGWKG S
Sbjct: 151 ANSTPVGRPKKKNKTMNKGQVREDDEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSS 210
Query: 471 VEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCA-GGFPKSLFDSEGQIDSEDIYCAK 529
+EK++PEKEL+RAT EILRRKLKIRDLFQ LD+LCA G P+SLFD++G+I SEDI+CAK
Sbjct: 211 LEKIRPEKELERATKEILRRKLKIRDLFQHLDTLCAEGSLPESLFDTDGEISSEDIFCAK 270
Query: 530 CGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVN 589
CGSKDLS DNDIILCDG CDRGFHQYCLEPPL KEDIPPDDEGWLCPGCDCK D +DL+N
Sbjct: 271 CGSKDLSVDNDIILCDGFCDRGFHQYCLEPPLRKEDIPPDDEGWLCPGCDCKDDSLDLLN 330
Query: 590 ELQGTRLFITDNWEKVFPEAAA-----GHNQDPNFGLASDDS--------DDNEYDPDGS 636
+ GT+ ++D+WEK+FPEAAA G N D + D +DNE D DGS
Sbjct: 331 DSLGTKFSVSDSWEKIFPEAAAALVGGGQNLDCDLPSDDSDDEEYDPDCLNDNENDEDGS 390
Query: 637 ATDEQDEGDESSSDGSSSDDSDFTSTSDEV-----EAPADDKTYLGLSSEDSEDDEYNPD 691
D+ +ES ++ SSD+++FTS SDE+ E K + L S+DSEDD+Y+PD
Sbjct: 391 -----DDNEESENEDGSSDETEFTSASDEMIESFKEGKDIMKDVMALPSDDSEDDDYDPD 445
Query: 692 APELDDKVTQESSSSGSDFTSDSEDLAAVLEDNRSSGNDEGAASPL---GHSNGQRYKDG 748
AP DD + SS SD TSD+EDL + + + N + +PL G Q D
Sbjct: 446 APTCDD----DKESSNSDCTSDTEDLETSFKGDET--NQQAEDTPLEDPGRQTSQLQGDA 499
Query: 749 GNNESLNNELLSIIKPGQDGAAPVYGKRSSERLDYKKLYDETYGNVPYDSSDDESWSDDG 808
+L DG A V +R+ ERLDYKKLYDE Y NVP SSDD+
Sbjct: 500 ---------ILESDVGLDDGPAGVSRRRNVERLDYKKLYDEEYDNVPTSSSDDDD----- 545
Query: 809 GPRKRTKSTKEGSSASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNIS 868
K + KE S + +G T + K+ N ++T K+ R K D +
Sbjct: 546 -WDKTARMGKEDSESEDEGDTVPL---------KQSSNAEDHTSKKLIR-KSKRADKKDT 594
Query: 869 PAKSHEGCSTPGSRGRRHRTSYR--KLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLT 926
EG G G ++S K + TQ+LY SF+ENQYP++ TKESLAKEL +T
Sbjct: 595 LEMPQEGPGENGGSGEIEKSSSSACKQTDPKTQRLYISFQENQYPDKATKESLAKELQMT 654
Query: 927 FSQVRKWFENTRWSFNHPSSKNAKLANSEKGTCTPQSNKNTVGRVSNCNGAENVQSSKTG 986
QV WF++ RWS N +K SE ENV+ KTG
Sbjct: 655 VKQVNNWFKHRRWSIN------SKPLVSE----------------------ENVEKLKTG 686
Query: 987 VDDTGCMT--GDVKNNTQECNSI--KPTSQTSRKRDR 1019
+ C T T E S+ KPT+ SRKR R
Sbjct: 687 KEGE-CETSVAGSSKQTMETESVAEKPTNTGSRKRRR 722
>sp|P48786|PRH_PETCR Pathogenesis-related homeodomain protein OS=Petroselinum crispum
GN=PRH PE=2 SV=1
Length = 1088
Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust.
Identities = 266/553 (48%), Positives = 332/553 (60%), Gaps = 72/553 (13%)
Query: 434 ADEYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLSVEKLKPEKELQRATSEILRRKLK 493
DE+ RIRTHLRYLL+RI YE+N +DAYS EGWKG S++K+KPEKEL+RA +EI RKLK
Sbjct: 487 VDEFCRIRTHLRYLLHRIKYEKNFLDAYSGEGWKGQSLDKIKPEKELKRAKAEIFGRKLK 546
Query: 494 IRDLFQRLD-SLCAGGFPKSLFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACDRGF 552
IRDLFQRLD + G P+ LFDS G+IDSEDI+CAKCGSKD++ NDIILCDGACDRGF
Sbjct: 547 IRDLFQRLDLARSEGRLPEILFDSRGEIDSEDIFCAKCGSKDVTLSNDIILCDGACDRGF 606
Query: 553 HQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVF----PE 608
HQ+CL+PPLLKE IPPDDEGWLCPGC+CK+DCI L+N+ Q T + + D+WEKVF
Sbjct: 607 HQFCLDPPLLKEYIPPDDEGWLCPGCECKIDCIKLLNDSQETNILLGDSWEKVFAEEAAA 666
Query: 609 AAAGHNQDPNFGLASDDSDDNEYDPDGSATDEQDEGDESSSDGSSSDDSDFTSTSDEVEA 668
AA+G N D N GL SDDS+D++YDP G DE+ +GD+ SS+D+SD+ S SD+++
Sbjct: 667 AASGKNLDDNSGLPSDDSEDDDYDPGGPDLDEKVQGDD-----SSTDESDYQSESDDMQV 721
Query: 669 PADDKTYLGLSSEDSEDDEYNPDAPELDDKVTQESSSSGSDFTSDSEDLAAVLEDNRSSG 728
K GL S+DSEDDEY+P + D++ ++SS SDFTSDSED V +D + +G
Sbjct: 722 -IRQKNSRGLPSDDSEDDEYDPSGL-VTDQMYKDSSC--SDFTSDSEDFTGVFDDYKDTG 777
Query: 729 NDEG-AASPLGHSNGQRYKDGGNNESLNNELLSIIKPGQDGAAPVYGKRSSERLDYKKLY 787
+G AS H NNE P Q AP+Y +R E LDYKKL
Sbjct: 778 KAQGPLASTPDHVR--------NNEE------GCGHPEQGDTAPLYPRRQVESLDYKKLN 823
Query: 788 D--------------------------ETYGNVPYDSSDDESWSDDGGPRKRTKSTKEGS 821
D E YGN DSS DE + P K S KE
Sbjct: 824 DIEFSKMCDILDILSSQLDVIICTGNQEEYGNTSSDSS-DEDYMVTSSPDK-NNSDKEA- 880
Query: 822 SASPDGKTPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTP-- 879
T + R R+S ++ E+T RR K E ++ ++S E + P
Sbjct: 881 -------TAMERGRESGDLELDQ-KARESTHNRRYIKKFAVEGTDSFLSRSCEDSAAPVA 932
Query: 880 GSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRW 939
GS+ TS GE TQ+L SFKENQYP R KESLA EL L+ QV WF N RW
Sbjct: 933 GSKS----TSKTLHGEHATQRLLQSFKENQYPQRAVKESLAAELALSVRQVSNWFNNRRW 988
Query: 940 SFNHPSSKNAKLA 952
SF H S + +A
Sbjct: 989 SFRHSSRIGSDVA 1001
>sp|P46605|HOX1A_MAIZE Homeobox protein HOX1A OS=Zea mays GN=HOX1A PE=2 SV=1
Length = 719
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 269/639 (42%), Positives = 355/639 (55%), Gaps = 69/639 (10%)
Query: 343 MEKKSCLEQSETPPNY--VANNSACLGRKGKRATKSLKNN-YTVRSLIGSDRVLRSRSGE 399
+E L S+T PN + N +GK+ ++ L YT+ S RVLRS S
Sbjct: 29 LEHSVLLSTSQTMPNNLGIRKNYKRAANRGKKGSQGLTGQAYTLMSSNSDVRVLRSTSSS 88
Query: 400 RPIPPESSINLADVNSIGERKQKKRNKIRRKKIVADEYSRIRTHLRYLLNRINYEQNLID 459
+ E A V +R++ R K DE+S+IR +RY+LNR+NYEQ+LI+
Sbjct: 89 KTTSTEHV--QAPVQPAAKRRKMSRAS---NKSSTDEFSQIRKRVRYILNRMNYEQSLIE 143
Query: 460 AYSSEGWKGLSVEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCAGG-FPKSLFDSEG 518
AY+SEGWK S++K++PEKEL+RA SEILR KL+IR++F+ +DSL + G ++LFDSEG
Sbjct: 144 AYASEGWKNQSLDKIRPEKELERAKSEILRCKLRIREVFRNIDSLLSKGKIDETLFDSEG 203
Query: 519 QIDSEDIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+I EDI+C+ CGS D + NDIILCDGACDRGFHQ CL PPL EDIP DEGWLCP C
Sbjct: 204 EISCEDIFCSTCGSNDATLGNDIILCDGACDRGFHQNCLNPPLRTEDIPMGDEGWLCPAC 263
Query: 579 DCKVDCIDLVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLASDDSDDNEYDPDGSAT 638
DCK+DCIDL+NEL G+ + I D+WEKVFP+AAA N SDD++ +
Sbjct: 264 DCKIDCIDLINELHGSNISIEDSWEKVFPDAAAMANDSKQDDAFDLPSDDSDDNDFDPNM 323
Query: 639 DEQ-------DEGDESSSDGSSSDDSDFTSTSDEVEAPADDKT-YLGLSSEDSEDDEYNP 690
E+ + +E GS SDDSDF + SD+ E D K L L SEDSEDD+Y+P
Sbjct: 324 PEEHVVGKDEESSEEDEDGGSDSDDSDFLTCSDDSEPLIDKKVDDLRLPSEDSEDDDYDP 383
Query: 691 DAPELDDKVTQESSSSGSDFTSDSEDLAAVLEDNRSSGNDEGAASPL---------GHSN 741
P+ D V ++SSS SDFTSDS+D + SG+DE +SPL
Sbjct: 384 AGPDSDKDVEKKSSSDESDFTSDSDDFCKEIS---KSGHDE-VSSPLLPDAKVGDMEKIT 439
Query: 742 GQRYKDGGNNESLNNELLSIIKPGQDGAAPVYGKRSSERLDYKKLYDETYGNVPYDSSDD 801
Q ++ + E+ Q P +R +ERLDYKKLYDE YG DSSDD
Sbjct: 440 AQAKTTSSADDPMETEI------DQGVVLPDSRRRQAERLDYKKLYDEAYGEASSDSSDD 493
Query: 802 ESWSDDGGPRKRTKSTKEGSSASPDGKTPVIRRRK---STKAAKEKLNETENTPKRRGRP 858
E WS P KS +EG + SP GK + +T++ K+ L+ + +
Sbjct: 494 EEWSGKNTP--IIKSNEEGEANSPAGKGSRVVHHNDELTTQSTKKSLHSIHGSVDEKP-G 550
Query: 859 KLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKES 918
L + SN + K H G + QKL+ FK YP+R+ KES
Sbjct: 551 DLTSNGSNSTARKGH-------------------FGPVINQKLHEHFKTQPYPSRSVKES 591
Query: 919 LAKELGLTFSQVRKWFENTRWSFNHPSSKNAKLANSEKG 957
LA+ELGLTF QV KWFE R S A++A+S KG
Sbjct: 592 LAEELGLTFRQVNKWFETRRHS--------ARVASSRKG 622
>sp|P48785|PRH_ARATH Pathogenesis-related homeodomain protein OS=Arabidopsis thaliana
GN=PRH PE=2 SV=1
Length = 796
Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
Query: 431 KIVADEYSRIRTHLRYLLNRINYEQNLIDAYSSEGWKGLSVEKLKPEKELQRATSEILRR 490
K+ D+ R++ RYLL ++ +QNLIDAY++EGWKG S EK++P+KEL+RA EIL
Sbjct: 96 KVEVDDSLRLQRRTRYLLIKMKMQQNLIDAYATEGWKGQSREKIRPDKELERARKEILNC 155
Query: 491 KLKIRDLFQRLDSLCA-GGFPKSLFDSEGQIDSEDIYCAKCGSKDLSADNDIILCDGACD 549
KL +RD ++LD L + G + + S+G I + I+CA+C S++ DNDIILCDG C+
Sbjct: 156 KLGLRDAIRQLDLLSSVGSMEEKVIASDGSIHHDHIFCAECNSREAFPDNDIILCDGTCN 215
Query: 550 RGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCIDLVNELQGTRLFITDNWEKVFPEA 609
R FHQ CL+PPL E IPP D+GW C CDCK++ ID +N GT + NW+ +F E
Sbjct: 216 RAFHQKCLDPPLETESIPPGDQGWFCKFCDCKIEIIDTMNAQIGTHFPVDSNWQDIFNEE 275
Query: 610 AA 611
A+
Sbjct: 276 AS 277
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 35/171 (20%)
Query: 772 VYGKRSSERLDYKKLYDETYGN---VPYDSSDDESWSDDGGPRKRTKSTKEGSSASPDGK 828
V G R +DY +LY E +G + S+DE W GP R K +E D
Sbjct: 368 VCGPRQRRTVDYTQLYYEMFGKDAVLQEQGSEDEDW----GPNDRRKRKRES-----DAG 418
Query: 829 TPVIRRRKSTKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRT 888
+ ++ +S+K ++ + E + + + S GRR
Sbjct: 419 STLVTMCESSKKDQDVVETLEQSER--------------------DSVSVENKGGRRR-- 456
Query: 889 SYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRW 939
+L +KL F E + P++ ++ LAKEL L +V KWF+NTR+
Sbjct: 457 -MFRLPRNAVEKLRQVFAETELPSKAVRDRLAKELSLDPEKVNKWFKNTRY 506
>sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2
Length = 1441
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG L ++IL +CD G+H CL PPL+ I PD E W CP C K+ C
Sbjct: 894 CKKCG---LPNHPELILLCDSCDSGYHTACLRPPLM---IIPDGE-WFCPPCQHKLLCEK 946
Query: 587 LVNELQ 592
L +LQ
Sbjct: 947 LEEQLQ 952
>sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis
thaliana GN=MBD9 PE=2 SV=1
Length = 2176
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 25/109 (22%)
Query: 471 VEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCAGGFPKSLFDSEGQIDSEDIYCAKC 530
V+KLK ++L+ ++E+ K +I+D+ ++ L PK+ +D EG C C
Sbjct: 1250 VQKLKDYRKLECLSAEM---KKEIKDIVVSVNKL-----PKAPWD-EG-------VCKVC 1293
Query: 531 GS-KDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
G KD D+ ++LCD CD +H YCL PPL++ IP D W CP C
Sbjct: 1294 GVDKD---DDSVLLCD-TCDAEYHTYCLNPPLIR--IP--DGNWYCPSC 1334
Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 524 DIYCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
D C CG + + +++CD AC+RGFH C+ + E P D W+C C
Sbjct: 83 DASCGACGRPE--SIELVVVCD-ACERGFHMSCVNDGV--EAAPSAD--WMCSDC 130
>sp|O15499|GSC2_HUMAN Homeobox protein goosecoid-2 OS=Homo sapiens GN=GSC2 PE=2 SV=1
Length = 205
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 875 GCSTPGS--RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRK 932
G PGS R RRHRT + EE Q L F +NQYP+ +T+E LA + L +V
Sbjct: 116 GAVGPGSQRRTRRHRTIF---SEEQLQALEALFVQNQYPDVSTRERLAGRIRLREERVEV 172
Query: 933 WFENTR--WSFNHPSSKNAKLA----NSEKGTC 959
WF+N R W +S +A+L S KG+C
Sbjct: 173 WFKNRRAKWRHQKRASASARLLPGVKKSPKGSC 205
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Query: 526 YCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
+C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP +C V +
Sbjct: 187 FCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCP--ECTVPGV 237
Query: 586 D 586
D
Sbjct: 238 D 238
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 17/101 (16%)
Query: 482 RATSEILRRKLKIRDL--FQRLDSLCAGGFPKSLFDS--EGQIDSEDIYCAKCGSKDLSA 537
+ S + + K+ IRD F R+ L + D+ + + SE+ C C K
Sbjct: 1111 KVASAVEKWKVAIRDAQTFSRMHVLLG------MLDACIKWDMSSENARCKVCRKK--GE 1162
Query: 538 DNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
D+ +ILCD C++ FH +CL P L +IP D WLCP C
Sbjct: 1163 DDKLILCD-ECNKAFHLFCLRPVLF--NIP--DGEWLCPAC 1198
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus
norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Query: 526 YCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
+C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP +C V +
Sbjct: 190 FCEVCGRSD--REDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCP--ECAVPGV 240
Query: 586 D 586
D
Sbjct: 241 D 241
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 7/53 (13%)
Query: 526 YCAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
+C CG D ++ ++LCDG CD G+H CL+PPL +++P D+ W CP C
Sbjct: 185 FCEVCGRSDR--EDRLLLCDG-CDAGYHMECLDPPL--QEVPVDE--WFCPEC 230
>sp|Q3LU40|PROP1_CEBAP Homeobox protein prophet of Pit-1 OS=Cebus apella GN=PROP1 PE=3
SV=1
Length = 226
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 850 NTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQ 909
+ P R RP SP G P SR RRHRT++ + E +L ++F NQ
Sbjct: 39 SAPPSRKRPGAGVGRPRFSPQGGQRG--RPHSR-RRHRTTFSAVQLE---QLESAFGRNQ 92
Query: 910 YPNRTTKESLAKELGLTFSQVRKWFENTR 938
YP+ +ESLA++ GL+ ++++ WF+N R
Sbjct: 93 YPDIWARESLARDTGLSEARIQVWFQNRR 121
>sp|Q7TMI3|UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus GN=Uhrf2 PE=1
SV=1
Length = 803
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 89/226 (39%), Gaps = 68/226 (30%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C KCG K N +LCD C+ +H YCL PPL D P++E W CP CK D +
Sbjct: 348 CHKCGEK--RDPNMQLLCD-ECNMAYHIYCLSPPL---DKVPEEEYWYCP--SCKTDSSE 399
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLASDDSD-------DNEYDP------ 633
+V G RL ++ K+ P A+ +D G+A N Y P
Sbjct: 400 VVK--AGERLKLSKKKAKM-PSASTESRRDWGRGMACVGRTKECTIVPSNHYGPIPGIPV 456
Query: 634 ----------------------------DGSAT--------DEQDEGDESSSDGSSSDDS 657
DG+ + DE D GDE + GS +
Sbjct: 457 GSTWRFRVQVSEAGVHRPHVGGIHGRSNDGAYSLVLAGGFEDEVDRGDEFTYTGSGGKN- 515
Query: 658 DFTSTSDEVEAPADDKTYLGLSSEDSEDDEYNPDAPELDDKVTQES 703
+ + + AP+ D+T ++ + N DAP LDDK+ ES
Sbjct: 516 --LAGNKRIGAPSADQTLTNMNRALA----LNCDAP-LDDKIGAES 554
>sp|B3DM47|PBX2_XENTR Pre-B-cell leukemia transcription factor 2 OS=Xenopus tropicalis
GN=pbx2 PE=2 SV=1
Length = 422
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 883 GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 237 ARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRY 295
>sp|P56916|GSC2_MOUSE Homeobox protein goosecoid-2 OS=Mus musculus GN=Gsc2 PE=2 SV=1
Length = 198
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 868 SPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTF 927
SPA + P R RRHRT + EE Q L F +NQYP+ T+E LA + L
Sbjct: 105 SPALTGTSGPGPQRRTRRHRTIF---SEEQLQALEALFVQNQYPDVGTRERLAVRIRLRE 161
Query: 928 SQVRKWFENTRWSFNH 943
+V WF+N R + H
Sbjct: 162 ERVEVWFKNRRAKWRH 177
>sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1
Length = 786
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Query: 527 CAKCGSKDLSADNDI-ILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CG K D D ++CD CD FH YCL PPL +PP++E W CP DC++D
Sbjct: 322 CHVCGGKQ---DPDKQLMCD-ECDMAFHIYCLRPPL--SSVPPEEE-WYCP--DCRIDSS 372
Query: 586 DLV 588
++V
Sbjct: 373 EVV 375
>sp|O35984|PBX2_MOUSE Pre-B-cell leukemia transcription factor 2 OS=Mus musculus GN=Pbx2
PE=1 SV=1
Length = 430
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 883 GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 244 ARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRY 302
>sp|B6CHA3|UHRF1_XENLA E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2
SV=1
Length = 772
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K +LCD CD FH YCL+PPL + P DE W CP DC+ D +
Sbjct: 316 CCICGGKQDPEKQ--LLCD-ECDLAFHIYCLKPPL---SVIPQDEDWYCP--DCRNDASE 367
Query: 587 LVNELQGTRL 596
+V L G +L
Sbjct: 368 VV--LAGEKL 375
>sp|P40425|PBX2_HUMAN Pre-B-cell leukemia transcription factor 2 OS=Homo sapiens GN=PBX2
PE=1 SV=2
Length = 430
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 883 GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
RR R ++ K EV + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 244 ARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRY 302
>sp|P41778|PBX1_MOUSE Pre-B-cell leukemia transcription factor 1 OS=Mus musculus GN=Pbx1
PE=1 SV=2
Length = 430
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 883 GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 233 ARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRY 291
>sp|P40424|PBX1_HUMAN Pre-B-cell leukemia transcription factor 1 OS=Homo sapiens GN=PBX1
PE=1 SV=1
Length = 430
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 883 GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
RR R ++ K E+ + + S N YP+ KE LAK+ G+T SQV WF N R +
Sbjct: 233 ARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRY 291
>sp|Q8N693|ESX1_HUMAN Homeobox protein ESX1 OS=Homo sapiens GN=ESX1 PE=1 SV=3
Length = 406
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 879 PGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR 938
P R RR RT++ + Q+L N F E+QYP+ +E LA L LT +V+ WF+N R
Sbjct: 135 PPERKRRRRTAFTQFQ---LQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRR 191
Query: 939 --WSFN 942
W N
Sbjct: 192 AKWKRN 197
>sp|Q9BYU1|PBX4_HUMAN Pre-B-cell leukemia transcription factor 4 OS=Homo sapiens GN=PBX4
PE=2 SV=2
Length = 374
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 883 GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
RR R ++ K EV + + S N YP+ KE LA++ GLT SQV WF N R +
Sbjct: 210 ARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRY 268
>sp|Q7PMT1|EXD_ANOGA Homeobox protein extradenticle OS=Anopheles gambiae GN=exd PE=3
SV=2
Length = 362
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 883 GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFN 942
RR R ++ K E+ + + S N YP+ KE LA++ G+T SQV WF N R +
Sbjct: 226 ARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYK 285
Query: 943 HPSSKNAKLAN 953
K + AN
Sbjct: 286 KNIGKAQEEAN 296
>sp|E7EZF3|UHRF1_DANRE E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1
Length = 776
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 527 CAKCGSKDLSADNDI-ILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCI 585
C CG K D D +LCD CD FH YCL PPL PDDE W CP DC+ D
Sbjct: 316 CHVCGIKQ---DPDKQLLCD-ECDMAFHTYCLNPPLT---TIPDDEDWYCP--DCRNDAS 366
Query: 586 DLV 588
++V
Sbjct: 367 EVV 369
>sp|P40427|EXD_DROME Homeobox protein extradenticle OS=Drosophila melanogaster GN=exd
PE=1 SV=1
Length = 376
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 883 GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFN 942
RR R ++ K E+ + + S N YP+ KE LA++ G+T SQV WF N R +
Sbjct: 238 ARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYK 297
Query: 943 HPSSKNAKLAN 953
K + AN
Sbjct: 298 KNIGKAQEEAN 308
>sp|Q29CT2|EXD_DROPS Homeobox protein extradenticle OS=Drosophila pseudoobscura
pseudoobscura GN=exd PE=3 SV=1
Length = 376
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 883 GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFN 942
RR R ++ K E+ + + S N YP+ KE LA++ G+T SQV WF N R +
Sbjct: 238 ARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYK 297
Query: 943 HPSSKNAKLAN 953
K + AN
Sbjct: 298 KNIGKAQEEAN 308
>sp|Q3LU39|PROP1_GORGO Homeobox protein prophet of Pit-1 OS=Gorilla gorilla gorilla
GN=PROP1 PE=3 SV=1
Length = 225
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 850 NTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQ 909
+ P R P S SP G P SR RRHRT++ + E +L ++F NQ
Sbjct: 39 SAPPCRRLPGAGGGRSRFSPQGGQRG--RPHSR-RRHRTTFSPVQLE---QLESAFGRNQ 92
Query: 910 YPNRTTKESLAKELGLTFSQVRKWFENTR 938
YP+ +ESLA++ GL+ ++++ WF+N R
Sbjct: 93 YPDIWARESLARDTGLSEARIQVWFQNRR 121
>sp|Q96PU4|UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2 OS=Homo sapiens GN=UHRF2 PE=1
SV=1
Length = 802
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 85/226 (37%), Gaps = 68/226 (30%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGCDCKVDCID 586
C CG K N +LCD C+ +H YCL PPL D P++E W CP CK D +
Sbjct: 347 CRVCGGK--HEPNMQLLCD-ECNVAYHIYCLNPPL---DKVPEEEYWYCP--SCKTDSSE 398
Query: 587 LVNELQGTRLFITDNWEKVFPEAAAGHNQDPNFGLASDDSD-------DNEYDP------ 633
+V G RL ++ K+ P A+ +D G+A N Y P
Sbjct: 399 VVK--AGERLKMSKKKAKM-PSASTESRRDWGRGMACVGRTRECTIVPSNHYGPIPGIPV 455
Query: 634 ------------------------------------DGSATDEQDEGDESSSDGSSSDDS 657
G DE D GDE + GS +
Sbjct: 456 GSTWRFRVQVSEAGVHRPHVGGIHGRSNDGAYSLVLAGGFADEVDRGDEFTYTGSGGKN- 514
Query: 658 DFTSTSDEVEAPADDKTYLGLSSEDSEDDEYNPDAPELDDKVTQES 703
+ + + AP+ D+T ++ + N DAP LDDK+ ES
Sbjct: 515 --LAGNKRIGAPSADQTLTNMNRALA----LNCDAP-LDDKIGAES 553
>sp|O75360|PROP1_HUMAN Homeobox protein prophet of Pit-1 OS=Homo sapiens GN=PROP1 PE=1
SV=2
Length = 226
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 865 SNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELG 924
S SP G P SR RRHRT++ + E +L ++F NQYP+ +ESLA++ G
Sbjct: 54 SRFSPQGGQRG--RPHSR-RRHRTTFSPVQLE---QLESAFGRNQYPDIWARESLARDTG 107
Query: 925 LTFSQVRKWFENTR 938
L+ ++++ WF+N R
Sbjct: 108 LSEARIQVWFQNRR 121
>sp|Q8MJI9|PROP1_BOVIN Homeobox protein prophet of Pit-1 OS=Bos taurus GN=PROP1 PE=2 SV=1
Length = 226
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 854 RRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNR 913
R GRPKL+ + P SR RRHRT++ E +L ++F NQYP+
Sbjct: 50 RVGRPKLSLQGVQRG---------RPHSR-RRHRTTFSPAQLE---QLESAFGRNQYPDI 96
Query: 914 TTKESLAKELGLTFSQVRKWFENTR 938
+ESLA++ GL+ ++++ WF+N R
Sbjct: 97 WARESLAQDTGLSEARIQVWFQNRR 121
>sp|Q3LU41|PROP1_THEGE Homeobox protein prophet of Pit-1 OS=Theropithecus gelada GN=PROP1
PE=3 SV=1
Length = 226
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 13/83 (15%)
Query: 856 GRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTT 915
GRP+ SP G P SR RRHRT++ + E +L ++F NQYP+
Sbjct: 52 GRPRF-------SPQGGQRG--RPHSR-RRHRTTFSPVQLE---QLESAFGRNQYPDIWA 98
Query: 916 KESLAKELGLTFSQVRKWFENTR 938
+ESLA++ GL+ ++++ WF+N R
Sbjct: 99 RESLARDTGLSEARIQVWFQNRR 121
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 510 PKSLFDSEGQIDSEDIY-CAKCGSKDLSADND-IILCDGACDRGFHQYCLEPPLLKEDIP 567
PKS S+ ++ D+Y C CGS + D D ++LCDG CD +H +CL PPL D+P
Sbjct: 296 PKS--RSKKATNAVDLYVCLLCGSGN---DEDRLLLCDG-CDDSYHTFCLIPPL--HDVP 347
Query: 568 PDDEGWLCPGC 578
D W CP C
Sbjct: 348 KGD--WRCPKC 356
>sp|Q99NE9|PBX4_MOUSE Pre-B-cell leukemia transcription factor 4 OS=Mus musculus GN=Pbx4
PE=2 SV=2
Length = 378
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 883 GRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
RR R ++ K +V + + S N YP+ TKE LA++ G+T SQV WF N R +
Sbjct: 215 ARRKRRNFSKQATDVLNEYFYSHLSNPYPSEETKEELARKGGITVSQVSNWFGNKRIRY 273
>sp|Q9W5Z2|PITX2_DANRE Pituitary homeobox 2 OS=Danio rerio GN=pitx2 PE=2 SV=1
Length = 314
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
Query: 849 ENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKEN 908
E+ K +G+ K EDSN P+K R RR RT + + Q+L +F+ N
Sbjct: 58 ESVEKEKGQSK--NEDSNDDPSKK--------KRQRRQRTHF---TSQQLQELEATFQRN 104
Query: 909 QYPNRTTKESLAKELGLTFSQVRKWFENTR 938
+YP+ +T+E +A LT ++VR WF+N R
Sbjct: 105 RYPDMSTREEIAVWTNLTEARVRVWFKNRR 134
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 527 CAKCGSKDLSADNDIILCDGACDRGFHQYCLEPPLLKEDIPPDDEGWLCPGC 578
C C K A+N ++LCDG CDRG H YC+ P L + +P D W CP C
Sbjct: 1152 CKICRKKG-DAEN-MVLCDG-CDRGHHTYCVRPKL--KAVP--DGDWFCPEC 1196
>sp|O18400|PITX_DROME Pituitary homeobox homolog Ptx1 OS=Drosophila melanogaster GN=Ptx1
PE=2 SV=2
Length = 509
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 882 RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR 938
R RR RT + + Q+L ++F N+YP+ +T+E +A LT ++VR WF+N R
Sbjct: 263 RQRRQRTHFT---SQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRR 316
>sp|A6NLW8|DUXA_HUMAN Double homeobox protein A OS=Homo sapiens GN=DUXA PE=2 SV=1
Length = 204
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 857 RPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTK 916
RP+ T +S+ S + G RR RT+Y L +F +N YP ++
Sbjct: 75 RPEAETLESSQSQGQDQPGVEFQSREARRCRTTY---SASQLHTLIKAFMKNPYPGIDSR 131
Query: 917 ESLAKELGLTFSQVRKWFENTR 938
E LAKE+G+ S+V+ WF+N R
Sbjct: 132 EELAKEIGVPESRVQIWFQNRR 153
Score = 40.0 bits (92), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 886 HRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR 938
HR K EE + L N+F + YP TK+ LA E+ S+++ WF+N R
Sbjct: 15 HRRCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRR 67
>sp|P53544|GSC_DANRE Homeobox protein goosecoid OS=Danio rerio GN=gsc PE=2 SV=1
Length = 240
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 882 RGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR 938
R RRHRT + +E + L N F+E +YP+ T+E LA+++ L +V WF+N R
Sbjct: 145 RKRRHRTIFT---DEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRR 198
>sp|P10035|HMH2_DROME Homeobox protein H2.0 OS=Drosophila melanogaster GN=H2.0 PE=2 SV=2
Length = 418
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 880 GSRGRRHRTSYRKLGEEVTQK-LYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR 938
GS G+R R+ R + + +K L F++ +Y + + LA L LT +QV+ WF+N R
Sbjct: 288 GSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRR 347
Query: 939 WSFNHPSSKNAKLANSEKGTCTPQS 963
+ H + +N K ++ + P+S
Sbjct: 348 MKWRH-TRENLKSGQEKQPSAVPES 371
>sp|Q9YGT4|HXB6B_DANRE Homeobox protein Hox-B6b OS=Danio rerio GN=hoxb6b PE=2 SV=2
Length = 224
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 818 KEGSSASPDGKTPVIRRRKSTKAAKEKLNE-------------TENTPKRRGRPKLNTED 864
+ GS+++ D TP I R A L + TE +R +TED
Sbjct: 68 RSGSTSACDYSTPNIYRTADRSCAIGSLEDSLVLTQDQCKTDCTEQGTER----YFSTED 123
Query: 865 SNISPA----KSHEGCS-TPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESL 919
+P + C+ PGS GRR R +Y + T +L F N+Y R + +
Sbjct: 124 KPCTPVYPWMQRMNSCNGMPGSTGRRGRQTYTRF---QTLELEKEFHFNRYLTRRRRIEI 180
Query: 920 AKELGLTFSQVRKWFENTR--WSFNHPSSKNAKLANSEKG 957
+ L LT Q++ WF+N R W + + +AK+++ E G
Sbjct: 181 SHALCLTERQIKIWFQNRRMKWKKENKAVNSAKVSDEEDG 220
>sp|P39021|MEOX2_XENLA Homeobox protein MOX-2 OS=Xenopus laevis GN=meox2 PE=2 SV=2
Length = 298
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 853 KRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPN 912
KR G+ K ++ DS KS S+ R+ RT++ K E ++L F + Y
Sbjct: 156 KRTGKRKSDSSDSQEGSYKS-----DVNSKPRKERTAFTK---EQIRELEAEFAHHNYLT 207
Query: 913 RTTKESLAKELGLTFSQVRKWFENTRWSFNH-------PSSKNAKLANSEKGTCTP 961
R + +A L LT QV+ WF+N R + +++ +L N +KGT P
Sbjct: 208 RLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREKELVNVKKGTLLP 263
>sp|Q3LU38|PROP1_ALOBE Homeobox protein prophet of Pit-1 OS=Alouatta belzebul GN=PROP1
PE=3 SV=1
Length = 226
Score = 41.2 bits (95), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 30/40 (75%)
Query: 899 QKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR 938
++L ++F NQYP+ +ESLA++ GL+ ++++ WF+N R
Sbjct: 82 EQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRR 121
>sp|P50222|MEOX2_HUMAN Homeobox protein MOX-2 OS=Homo sapiens GN=MEOX2 PE=1 SV=2
Length = 304
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 881 SRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWS 940
S+ R+ RT++ K E ++L F + Y R + +A L LT QV+ WF+N R
Sbjct: 185 SKPRKERTAFTK---EQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMK 241
Query: 941 FNH-------PSSKNAKLANSEKGTCTP 961
+ +++ +L N +KGT P
Sbjct: 242 WKRVKGGQQGAAAREKELVNVKKGTLLP 269
>sp|P70121|ZHX1_MOUSE Zinc fingers and homeoboxes protein 1 OS=Mus musculus GN=Zhx1 PE=1
SV=2
Length = 873
Score = 38.1 bits (87), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 879 PGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTR 938
P S G R + + +L E L S+ +NQ+P+ + L K GLT +++KWF +TR
Sbjct: 462 PDSFGIRAKKTKEQLAE-----LKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTR 516
Query: 939 W 939
+
Sbjct: 517 Y 517
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 831 VIRRRKSTKAAKEKLNET---ENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHR 887
V R R TK + +++ +N K K+ ++SN+ +K G S+PG +
Sbjct: 598 VNRLRAQTKLTRREIDAWFTEKNKTKALKDEKIEVDESNVGSSKEEPGESSPGDETVAPK 657
Query: 888 TS-----YRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSF 941
+ +K E++ L ++F Q+P+ + LA+E GL + + WF +TR+++
Sbjct: 658 SGGTGKICKKTPEQL-HMLKSAFVRTQWPSAEEYDKLAEESGLARTDIVSWFGDTRYAW 715
>sp|A8DT10|HXD3_HAPBU Homeobox protein Hox-D3 OS=Haplochromis burtoni GN=hoxd3a PE=3 SV=1
Length = 404
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 877 STPGSRGRRHRTSYRKLGEEVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFEN 936
S PG +R +T+Y +L F N+Y R + +A L LT Q++ WF+N
Sbjct: 163 SPPGPASKRVKTAYT---SAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQN 219
Query: 937 TRWSFNHPSSKNAKLANSEKGT----CTPQSNKNTVG 969
R + K+ LA+S G P S N +G
Sbjct: 220 RRMKYKK-DQKSKGLAHSPLGHSPDRSPPLSGPNHIG 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.125 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 414,427,910
Number of Sequences: 539616
Number of extensions: 18840828
Number of successful extensions: 89152
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 1846
Number of HSP's that attempted gapping in prelim test: 63555
Number of HSP's gapped (non-prelim): 12170
length of query: 1063
length of database: 191,569,459
effective HSP length: 128
effective length of query: 935
effective length of database: 122,498,611
effective search space: 114536201285
effective search space used: 114536201285
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 67 (30.4 bits)