Query 001519
Match_columns 1062
No_of_seqs 715 out of 5473
Neff 8.5
Searched_HMMs 29240
Date Tue Mar 26 16:19:37 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001519.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_821-825//hhsearch_pdb/001519hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 463.1 24.3 274 742-1018 25-307 (311)
2 3v5w_A G-protein coupled recep 1.0 1 1 462.5 26.1 279 745-1024 185-472 (689)
3 3ubd_A Ribosomal protein S6 ki 1.0 1 1 448.0 21.4 275 745-1023 20-303 (304)
4 4b9d_A Serine/threonine-protei 1.0 1 1 429.7 20.1 254 747-1007 22-282 (350)
5 4fie_A Serine/threonine-protei 1.0 1 1 427.3 23.2 252 748-1008 150-407 (423)
6 4fih_A Serine/threonine-protei 1.0 1 1 426.4 21.3 252 748-1008 73-330 (346)
7 3hyh_A Carbon catabolite-derep 1.0 1 1 420.0 20.8 255 746-1007 10-268 (275)
8 3pfq_A PKC-B, PKC-beta, protei 1.0 1 1 414.9 26.6 280 743-1024 335-620 (674)
9 3uto_A Twitchin; kinase, muscl 1.0 1 1 410.0 25.8 258 746-1012 154-421 (573)
10 4g3f_A NF-kappa-beta-inducing 1.0 1 1 406.7 20.2 252 746-1008 55-329 (336)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=463.13 Aligned_cols=274 Identities=30% Similarity=0.466 Sum_probs=251.2
Q ss_pred CCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
Q ss_conf 45665778818997847889469999999389939999992220011200599999999876007987731303689840
Q 001519 742 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 821 (1062)
Q Consensus 742 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~ 821 (1062)
.......++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.+|+.|+|+++| +++++|++
T Consensus 25 ~~~~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv-~l~~~~~~ 103 (311)
T 4aw0_A 25 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV-KLYFTFQD 103 (311)
T ss_dssp --CCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBC-CEEEEEEC
T ss_pred CCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCC-EEEEEEEE
T ss_conf 98888852368988983164849999999999989999998888877978999999999999867998989-19999973
Q ss_pred CCEEEEEECCCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCC
Q ss_conf 890899982368889678841--999999999999999999999998997636779884998369949999716873468
Q 001519 822 SMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 899 (1062)
Q Consensus 822 ~~~~~lv~E~~~gg~L~~~l~--~~l~~~~~~~i~~qil~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFg~s~~~~ 899 (1062)
..++|+|||||.||+|.+++. +.+++..++.++.||+.||.|||+++|+||||||+|||++.++++||+|||+|+.+.
T Consensus 104 ~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 104 DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECC
T ss_conf 89899999648998999999874999999999999999999999998878268787899698589888998768750257
Q ss_pred C----CCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 9----972134237786693000589999735442367999764169999999999989999999508889999999889
Q 001519 900 G----NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEA 975 (1062)
Q Consensus 900 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~ 975 (1062)
. ....+++||+.|||||++.+..|+.++|||||||++|+|++|+.||.+ .+..+++..|......+|..+++++
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~~~p~~~s~~~ 261 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIKLEYDFPEKFFPKA 261 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCCTTCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 78776543675568030799897689999689899899999999749899899--7999999999719999996569999
Q ss_pred HHHHHHCCCCCCCCCCCCCC---HHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 99996201599587589999---47886199977889321124899
Q 001519 976 VDLLTKLLVVDENTRLGSQG---PTSVKTHPWFRDVDWKGIAESTS 1018 (1062)
Q Consensus 976 ~~li~~lL~~dp~~R~t~~~---~~eil~hp~f~~~~~~~~~~~~~ 1018 (1062)
++||.+||..||++|+|+.+ ...+++||||+++||+.+..++.
T Consensus 262 ~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~p 307 (311)
T 4aw0_A 262 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTP 307 (311)
T ss_dssp HHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCC
T ss_pred HHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHHHCCCCC
T ss_conf 9999997628975780967975877987798758989899407999
No 2
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=462.51 Aligned_cols=279 Identities=26% Similarity=0.454 Sum_probs=251.1
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCHHCCCHHHHHHHHHHHHH---HHCCCCCCCCEEEEEEEE
Q ss_conf 65778818997847889469999999389939999992220011200599999999876---007987731303689840
Q 001519 745 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLM---KSVSPSACVPQILCTCAD 821 (1062)
Q Consensus 745 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il---~~l~~~~~I~~l~~~~~~ 821 (1062)
.+++++|++++.||+|+||+||+|+++.+++.||+|++.+..+........+.+|..++ +.+.| |+|++++++|++
T Consensus 185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~H-P~IV~l~~~f~~ 263 (689)
T 3v5w_A 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCMSYAFHT 263 (689)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCC-TTBCCEEEEEEC
T ss_pred CCCHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEEEEEEE
T ss_conf 9956892888898316483999999999998999999757882525568999999999999964899-987179999998
Q ss_pred CCEEEEEECCCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCC
Q ss_conf 890899982368889678841--999999999999999999999998997636779884998369949999716873468
Q 001519 822 SMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 899 (1062)
Q Consensus 822 ~~~~~lv~E~~~gg~L~~~l~--~~l~~~~~~~i~~qil~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFg~s~~~~ 899 (1062)
..++|+||||+.||+|..++. +.|++..+++|+.||+.||.|||++||+||||||+|||++.+|++||+|||+|+.+.
T Consensus 264 ~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred CCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEECC
T ss_conf 99889999468998299999866999999999999999999999997885416886687598089988964565566637
Q ss_pred CCCCEEEECCCCCCCCEEEC-CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 99721342377866930005-8999973544236799976416999999999-998999999950888999999988999
Q 001519 900 GNRTFTICGMADYLAPEIVQ-GKGHGLAADWWALGVLIYFMLQGEMPFGSWR-ESEIDIVAKIAKGQLSLPQNLSPEAVD 977 (1062)
Q Consensus 900 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~pf~~~~-~~~~~~~~~i~~~~~~~p~~~s~~~~~ 977 (1062)
.....+.+||+.|||||++. +..|+.++|||||||++|+|++|..||.+.. .+...+...+......+|..+++++++
T Consensus 344 ~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~d 423 (689)
T 3v5w_A 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423 (689)
T ss_dssp SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH
T ss_conf 89877765786731889984799999599999999999999868799999986779999985057988887669999999
Q ss_pred HHHHCCCCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 99620159958758999--947886199977889321124899999110
Q 001519 978 LLTKLLVVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHEI 1024 (1062)
Q Consensus 978 li~~lL~~dp~~R~t~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~~ 1024 (1062)
||.+||+.||.+|+++. ++.++++||||+++||+.+..++.++|+..
T Consensus 424 LI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P 472 (689)
T 3v5w_A 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472 (689)
T ss_dssp HHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred HHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCCC
T ss_conf 9999760898687999888999996691504789889970899959369
No 3
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=447.99 Aligned_cols=275 Identities=29% Similarity=0.558 Sum_probs=248.9
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEEC---CCCCEEEEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
Q ss_conf 657788189978478894699999993---89939999992220011200599999999876007987731303689840
Q 001519 745 KVSLTDMEWRKCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 821 (1062)
Q Consensus 745 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~ 821 (1062)
....++|++++.||+|+||.||+|++. .+++.||+|++.+...... ...++.+|+.+++.++|+++| +++++|.+
T Consensus 20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv-~l~~~~~~ 97 (304)
T 3ubd_A 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIV-KLHYAFQT 97 (304)
T ss_dssp CCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEE-CEEEEEEE
T ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHH-HHHHHHHHHHHHHHCCCCCCC-EEEEEEEE
T ss_conf 3895565898897218883999999855887897999999815776847-899999999999877997999-09999998
Q ss_pred CCEEEEEECCCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCC
Q ss_conf 890899982368889678841--999999999999999999999998997636779884998369949999716873468
Q 001519 822 SMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS 899 (1062)
Q Consensus 822 ~~~~~lv~E~~~gg~L~~~l~--~~l~~~~~~~i~~qil~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFg~s~~~~ 899 (1062)
...+|+|||||.||+|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus 98 ~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 98 EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred CCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECC
T ss_conf 99999999757998889999755999999999999999999999997799588887899578689988762366343326
Q ss_pred C--CCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 9--97213423778669300058999973544236799976416999999999998999999950888999999988999
Q 001519 900 G--NRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVD 977 (1062)
Q Consensus 900 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~ 977 (1062)
. ....+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+ .+..+++..|......+|..+++++++
T Consensus 178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~~p~~~s~~~~~ 255 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKAKLGMPQFLSPEAQS 255 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 887630454418150799996568878777636119999999859899898--499999999971899998768999999
Q ss_pred HHHHCCCCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 99620159958758999--94788619997788932112489999911
Q 001519 978 LLTKLLVVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHE 1023 (1062)
Q Consensus 978 li~~lL~~dp~~R~t~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~ 1023 (1062)
||.+||+.||++|+++. .+.++++||||+++||+.+..++.+||+.
T Consensus 256 li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~ 303 (304)
T 3ubd_A 256 LLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFK 303 (304)
T ss_dssp HHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSC
T ss_pred HHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 999986469878799986789999769040378999998489994967
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=429.69 Aligned_cols=254 Identities=19% Similarity=0.252 Sum_probs=230.7
Q ss_pred CCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEE
Q ss_conf 77881899784788946999999938993999999222001120059999999987600798773130368984089089
Q 001519 747 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 826 (1062)
Q Consensus 747 ~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~ 826 (1062)
++++|++++.||+|+||.||+|+++.+++.||+|++.+.... ......+.+|+.+++.|+|+|+| +++++|.+...+|
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV-~~~~~~~~~~~~y 99 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMKHPNIV-QYRESFEENGSLY 99 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCCTTBC-CEEEEEEETTEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-HHHHHHHHHHHHHHHHCCCCCCC-CEEEEEEECCEEE
T ss_conf 512558847970277939999998899989999998658789-79999999999999877998989-1999999899999
Q ss_pred EEECCCCCCCHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC-
Q ss_conf 9982368889678841----99999999999999999999999899763677988499836994999971687346899-
Q 001519 827 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN- 901 (1062)
Q Consensus 827 lv~E~~~gg~L~~~l~----~~l~~~~~~~i~~qil~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFg~s~~~~~~- 901 (1062)
+|||||.||+|.+++. ..+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+...
T Consensus 100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred EEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEECCCC
T ss_conf 99948899839999997389999789999999999999999998991513597899798789998976465214406885
Q ss_pred -CCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC-CCCCCCCHHHHHHH
Q ss_conf -7213423778669300058999973544236799976416999999999998999999950888-99999998899999
Q 001519 902 -RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL-SLPQNLSPEAVDLL 979 (1062)
Q Consensus 902 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li 979 (1062)
...+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+ .+..+++..+..+.. .++..++.++++||
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--GSMKNLVLKIISGSFPPVSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHTCCCCCCTTSCHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 410145788360399998799989599999999999999978799899--699999999980899999755799999999
Q ss_pred HHCCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 6201599587589999478861999778
Q 001519 980 TKLLVVDENTRLGSQGPTSVKTHPWFRD 1007 (1062)
Q Consensus 980 ~~lL~~dp~~R~t~~~~~eil~hp~f~~ 1007 (1062)
.+||+.||++||++. ++|+||||+.
T Consensus 258 ~~~L~~dP~~R~s~~---e~l~hp~~~~ 282 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVN---SILEKGFIAK 282 (350)
T ss_dssp HHHTCSSGGGSCCHH---HHHTSHHHHT
T ss_pred HHHCCCCHHHCCCHH---HHHCCHHHHC
T ss_conf 998558966790899---9963997616
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=427.32 Aligned_cols=252 Identities=21% Similarity=0.366 Sum_probs=228.0
Q ss_pred CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEE
Q ss_conf 78818997847889469999999389939999992220011200599999999876007987731303689840890899
Q 001519 748 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 827 (1062)
Q Consensus 748 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~l 827 (1062)
.+.|++++.||+|+||.||+|+++.+++.||+|++.+... .....+.+|+.+|+.|+|+|+| +++++|.+.+.+|+
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV-~l~~~~~~~~~~~i 225 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVV-EMYNSYLVGDELWV 225 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBC-CEEEEEEETTEEEE
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCH---HHHHHHHHHHHHHHHCCCCCCC-CEEEEEEECCEEEE
T ss_conf 6843861696248184899999999998999999862554---6899999999999857998987-16899998999999
Q ss_pred EECCCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCC--CCCE
Q ss_conf 982368889678841-9999999999999999999999989976367798849983699499997168734689--9721
Q 001519 828 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSG--NRTF 904 (1062)
Q Consensus 828 v~E~~~gg~L~~~l~-~~l~~~~~~~i~~qil~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFg~s~~~~~--~~~~ 904 (1062)
|||||.||+|.++++ +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+.. ....
T Consensus 226 VmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp EEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred EEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCCCCCCC
T ss_conf 99698998289887616989999999999999999999988904465787778985899989803726547778876434
Q ss_pred EEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC---CCCCCCCCHHHHHHHHH
Q ss_conf 342377866930005899997354423679997641699999999999899999995088---89999999889999962
Q 001519 905 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQ---LSLPQNLSPEAVDLLTK 981 (1062)
Q Consensus 905 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~ 981 (1062)
+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+ .+..+.+..|.... ...+..+++++++||.+
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 66647472799997799999689999999999999978799898--6999999999727998876501299999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 015995875899994788619997788
Q 001519 982 LLVVDENTRLGSQGPTSVKTHPWFRDV 1008 (1062)
Q Consensus 982 lL~~dp~~R~t~~~~~eil~hp~f~~~ 1008 (1062)
||..||++|+++. ++|+||||+..
T Consensus 384 ~L~~dP~~R~ta~---ell~Hp~~~~~ 407 (423)
T 4fie_A 384 LLVRDPAQRATAA---ELLKHPFLAKA 407 (423)
T ss_dssp HSCSSTTTSCCHH---HHTTCGGGGGC
T ss_pred HCCCCHHHCCCHH---HHHCCHHHCCC
T ss_conf 8678956890999---99609875689
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=426.36 Aligned_cols=252 Identities=21% Similarity=0.360 Sum_probs=227.3
Q ss_pred CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEE
Q ss_conf 78818997847889469999999389939999992220011200599999999876007987731303689840890899
Q 001519 748 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 827 (1062)
Q Consensus 748 ~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~~l 827 (1062)
.+.|++++.||+|+||.||+|+++.+++.||+|++.+... .....+.+|+.+|+.++|+|+| +++++|.+.+.+|+
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV-~l~~~~~~~~~~~i 148 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVV-EMYNSYLVGDELWV 148 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---SSGGGGHHHHHHHHHCCCTTBC-CEEEEEEETTEEEE
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCH---HHHHHHHHHHHHHHHCCCCCCC-CEEEEEEECCEEEE
T ss_conf 5753870796027282999999989998999999852765---6899999999999867998999-19999998999999
Q ss_pred EECCCCCCCHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC--CCE
Q ss_conf 982368889678841-99999999999999999999999899763677988499836994999971687346899--721
Q 001519 828 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN--RTF 904 (1062)
Q Consensus 828 v~E~~~gg~L~~~l~-~~l~~~~~~~i~~qil~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFg~s~~~~~~--~~~ 904 (1062)
|||||.||+|.+++. +.+++..++.++.||+.||.|||+++|+||||||+|||++.+|.+||+|||+|+.+... ...
T Consensus 149 vmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp EECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred EEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCCCCCC
T ss_conf 99698998089998718989999999999999999999988835562788997887999889902757536678877534
Q ss_pred EEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC---CCCCCCCHHHHHHHHH
Q ss_conf 3423778669300058999973544236799976416999999999998999999950888---9999999889999962
Q 001519 905 TICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL---SLPQNLSPEAVDLLTK 981 (1062)
Q Consensus 905 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~---~~p~~~s~~~~~li~~ 981 (1062)
+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+ .+..+.+..|..... ..+..+++++++||.+
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 65627582799997799999689999999999999978799898--5999999999717999887502299999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 015995875899994788619997788
Q 001519 982 LLVVDENTRLGSQGPTSVKTHPWFRDV 1008 (1062)
Q Consensus 982 lL~~dp~~R~t~~~~~eil~hp~f~~~ 1008 (1062)
||..||++|+|+. ++|+||||+..
T Consensus 307 ~L~~dP~~R~ta~---e~l~Hp~~~~~ 330 (346)
T 4fih_A 307 LLVRDPAQRATAA---ELLKHPFLAKA 330 (346)
T ss_dssp HSCSSTTTSCCHH---HHTTCGGGGGC
T ss_pred HCCCCHHHCCCHH---HHHCCHHHCCC
T ss_conf 8679956890999---99609865689
No 7
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=419.97 Aligned_cols=255 Identities=22% Similarity=0.397 Sum_probs=234.4
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEE
Q ss_conf 57788189978478894699999993899399999922200112005999999998760079877313036898408908
Q 001519 746 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 825 (1062)
Q Consensus 746 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~ 825 (1062)
..+++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.++|+++| ++++++.+.+.+
T Consensus 10 ~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv-~~~~~~~~~~~~ 88 (275)
T 3hyh_A 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII-KLYDVIKSKDEI 88 (275)
T ss_dssp ----CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBC-CEEEEEECSSEE
T ss_pred CEEECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCC-EEEEEEEECCEE
T ss_conf 8933868999982176819999999999989999998378867878999999999999877998999-299999989989
Q ss_pred EEEECCCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCC-C
Q ss_conf 99982368889678841--99999999999999999999999899763677988499836994999971687346899-7
Q 001519 826 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLSGN-R 902 (1062)
Q Consensus 826 ~lv~E~~~gg~L~~~l~--~~l~~~~~~~i~~qil~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFg~s~~~~~~-~ 902 (1062)
|+||||+ +|+|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+..... .
T Consensus 89 ~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 89 IMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EEEEECC-CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCC
T ss_conf 9999278-997899998749999999999999999999999988930666875876887999899945477726678874
Q ss_pred CEEEECCCCCCCCEEECCCCC-CCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 213423778669300058999-9735442367999764169999999999989999999508889999999889999962
Q 001519 903 TFTICGMADYLAPEIVQGKGH-GLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDLLTK 981 (1062)
Q Consensus 903 ~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 981 (1062)
..+.+||+.|+|||++.+..| +.++|||||||++|+|++|+.||.+ .+...+++.+..+...+|..+++++++||.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~--~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 245 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 245 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCCTTSCHHHHHHHHH
T ss_pred CCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 67702893527745506898889836568789999999988799899--8999999999749999987799999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 01599587589999478861999778
Q 001519 982 LLVVDENTRLGSQGPTSVKTHPWFRD 1007 (1062)
Q Consensus 982 lL~~dp~~R~t~~~~~eil~hp~f~~ 1007 (1062)
||+.||++|+|+. ++++||||+.
T Consensus 246 ~L~~dP~~R~s~~---eil~hpw~k~ 268 (275)
T 3hyh_A 246 MLIVNPLNRISIH---EIMQDDWFKV 268 (275)
T ss_dssp HSCSSGGGSCCHH---HHHHCHHHHT
T ss_pred HCCCCHHHCCCHH---HHHCCCCCCC
T ss_conf 8658966891999---9971920065
No 8
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=1.00 E-value=1 Score=414.88 Aligned_cols=280 Identities=27% Similarity=0.458 Sum_probs=258.3
Q ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
Q ss_conf 56657788189978478894699999993899399999922200112005999999998760079877313036898408
Q 001519 743 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 822 (1062)
Q Consensus 743 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~ 822 (1062)
...+.+++|++++.||+|+||.||+++++.+++.||+|++.+...........+..|..++..+.++++|+.++.++++.
T Consensus 335 ~~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~ 414 (674)
T 3pfq_A 335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM 414 (674)
T ss_dssp -----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS
T ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEC
T ss_conf 56543102279989805998899999999999389999986011245778999999999998556998488888899858
Q ss_pred CEEEEEECCCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEECCCCCCCC-
Q ss_conf 90899982368889678841--999999999999999999999998997636779884998369949999716873468-
Q 001519 823 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQLVDFRFGKGLS- 899 (1062)
Q Consensus 823 ~~~~lv~E~~~gg~L~~~l~--~~l~~~~~~~i~~qil~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFg~s~~~~- 899 (1062)
..+|+||||+.|++|..++. +.+++..++.++.||+.||.|||+++|+||||||+|||++.++++||+|||+++...
T Consensus 415 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 415 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEEEECCEEECCCC
T ss_conf 87899993767984999997538988899999999999999999867907544876558983789689966540111456
Q ss_pred -CCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf -9972134237786693000589999735442367999764169999999999989999999508889999999889999
Q 001519 900 -GNRTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLPQNLSPEAVDL 978 (1062)
Q Consensus 900 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 978 (1062)
.....+++||+.|+|||++.+..|+.++||||||+++|+|++|+.||.+ .+..+++..|......+|..++.++.+|
T Consensus 495 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~--~~~~~~~~~i~~~~~~~p~~~s~~~~~l 572 (674)
T 3pfq_A 495 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVAYPKSMSKEAVAI 572 (674)
T ss_dssp TTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHSSCCCCCTTSCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 88642345688763597663678999501680618999999709999899--8989999999848778885479999999
Q ss_pred HHHCCCCCCCCCCCCC--CHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 9620159958758999--947886199977889321124899999110
Q 001519 979 LTKLLVVDENTRLGSQ--GPTSVKTHPWFRDVDWKGIAESTSPVPHEI 1024 (1062)
Q Consensus 979 i~~lL~~dp~~R~t~~--~~~eil~hp~f~~~~~~~~~~~~~~~p~~~ 1024 (1062)
|.+||..||.+|+++. ++.++++||||+++||+.+..++..||+..
T Consensus 573 i~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p 620 (674)
T 3pfq_A 573 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 620 (674)
T ss_dssp HHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCC
T ss_pred HHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 999744798787899877599986284213889999983889989878
No 9
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=410.00 Aligned_cols=258 Identities=23% Similarity=0.355 Sum_probs=233.0
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEE
Q ss_conf 57788189978478894699999993899399999922200112005999999998760079877313036898408908
Q 001519 746 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 825 (1062)
Q Consensus 746 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~ 825 (1062)
..+++|++++.||+|+||.||+|+++.+++.||+|++.+.. ......+.+|+.+|+.|+|+++| +++++|.+...+
T Consensus 154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv-~l~~~~~~~~~~ 229 (573)
T 3uto_A 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLV-NLHDAFEDDNEM 229 (573)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBC-CEEEEEECSSEE
T ss_pred CCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCC---HHHHHHHHHHHHHHHHCCCCCCC-EEEEEEEECCEE
T ss_conf 68536189889961648499999998899899999991524---20599999999999868998989-499999989988
Q ss_pred EEEECCCCCCCHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC--CCCEEEEECCCCCCCCC
Q ss_conf 99982368889678841---99999999999999999999999899763677988499836--99499997168734689
Q 001519 826 GLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK--SGHLQLVDFRFGKGLSG 900 (1062)
Q Consensus 826 ~lv~E~~~gg~L~~~l~---~~l~~~~~~~i~~qil~aL~~LH~~~ivHrDlkp~NIll~~--~g~vkL~DFg~s~~~~~ 900 (1062)
|++||||.||+|.+++. +.|++..++.++.||+.||.|||+++|+||||||+|||++. .+.+||+|||+|+.+..
T Consensus 230 ~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 230 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp EEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred EEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCEEECCC
T ss_conf 99986069995999999867999999999999999999999998892305687655121478889789940663068569
Q ss_pred C-CCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCC----CCCCHHH
Q ss_conf 9-7213423778669300058999973544236799976416999999999998999999950888999----9999889
Q 001519 901 N-RTFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQLSLP----QNLSPEA 975 (1062)
Q Consensus 901 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~~~p----~~~s~~~ 975 (1062)
. ...+.+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+ .+..+.+..|......++ ..++.++
T Consensus 310 ~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 387 (573)
T 3uto_A 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG--ENDDETLRNVKSCDWNMDDSAFSGISEDG 387 (573)
T ss_dssp TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC--SSHHHHHHHHHTTCCCCCSGGGTTSCHHH
T ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 9823234779451499996899989699999999999999978799798--69999999998489998953246899999
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf 9999620159958758999947886199977889321
Q 001519 976 VDLLTKLLVVDENTRLGSQGPTSVKTHPWFRDVDWKG 1012 (1062)
Q Consensus 976 ~~li~~lL~~dp~~R~t~~~~~eil~hp~f~~~~~~~ 1012 (1062)
++||.+||+.||.+|+++. ++|+||||+..+|..
T Consensus 388 ~dli~~~L~~dp~~R~t~~---e~l~Hpw~~~~~~~~ 421 (573)
T 3uto_A 388 KDFIRKLLLADPNTRMTIH---QALEHPWLTPGNAPG 421 (573)
T ss_dssp HHHHHTTSCSSGGGSCCHH---HHHHSTTTSCCCCTT
T ss_pred HHHHHHHCCCCHHHCCCHH---HHHCCCCCCCCCCCC
T ss_conf 9999988648956892999---995395748798987
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=406.67 Aligned_cols=252 Identities=19% Similarity=0.252 Sum_probs=219.3
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEE
Q ss_conf 57788189978478894699999993899399999922200112005999999998760079877313036898408908
Q 001519 746 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 825 (1062)
Q Consensus 746 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~I~~l~~~~~~~~~~ 825 (1062)
..++.|++.+.||+|+||.||+|+++.+++.||+|+++++... .+|+.+++.|+|+|+| +++++|.+..++
T Consensus 55 ~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--------~~E~~il~~l~HpnIV-~l~~~~~~~~~~ 125 (336)
T 4g3f_A 55 EEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIV-PLYGAVREGPWV 125 (336)
T ss_dssp BTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------THHHHTTTTCCCTTBC-CEEEEEEETTEE
T ss_pred CCHHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHHH--------HHHHHHHHHCCCCCCC-CEEEEEEECCEE
T ss_conf 2533517686851387809999998899989999997888869--------9999999857998999-399999989999
Q ss_pred EEEECCCCCCCHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC-CEEEEECCCCCCCCCCC
Q ss_conf 99982368889678841--9999999999999999999999989976367798849983699-49999716873468997
Q 001519 826 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQLVDFRFGKGLSGNR 902 (1062)
Q Consensus 826 ~lv~E~~~gg~L~~~l~--~~l~~~~~~~i~~qil~aL~~LH~~~ivHrDlkp~NIll~~~g-~vkL~DFg~s~~~~~~~ 902 (1062)
|+|||||.||+|.++++ +.+++..++.++.||+.||.|||+++|+||||||+|||++.+| .+||+|||+|+.+....
T Consensus 126 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp EEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCCC
T ss_conf 99996659986999998769999999999999999999999988904261677887995899979996278776856787
Q ss_pred -------CEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC---CCCCCCC
Q ss_conf -------213423778669300058999973544236799976416999999999998999999950888---9999999
Q 001519 903 -------TFTICGMADYLAPEIVQGKGHGLAADWWALGVLIYFMLQGEMPFGSWRESEIDIVAKIAKGQL---SLPQNLS 972 (1062)
Q Consensus 903 -------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~i~~~~~---~~p~~~s 972 (1062)
..+++||+.|||||++.+..|+.++|||||||++|+|++|+.||.+. +...++..|..... .+|+.++
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~s 283 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY--FRGPLCLKIASEPPPIREIPPSCA 283 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT--CCSCCHHHHHHSCCGGGGSCTTSC
T ss_pred CCCCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHCCCCCCHHCCCCCC
T ss_conf 654022178545580200899988999890899999999999999786998998--999999999808998002586679
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHH----------HHCCCCCCCC
Q ss_conf 88999996201599587589999478----------8619997788
Q 001519 973 PEAVDLLTKLLVVDENTRLGSQGPTS----------VKTHPWFRDV 1008 (1062)
Q Consensus 973 ~~~~~li~~lL~~dp~~R~t~~~~~e----------il~hp~f~~~ 1008 (1062)
+++.+||.+||+.||.+|||+.++.+ .++|||+..+
T Consensus 284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~ 329 (336)
T 4g3f_A 284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY 329 (336)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred HHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9999999997628976895999999999999754432169876777
Done!