Query 001523
Match_columns 1060
No_of_seqs 587 out of 3613
Neff 5.7
Searched_HMMs 29240
Date Tue Mar 26 15:49:43 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001523.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_826-829//hhsearch_pdb/001523hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nf1_A KLC 1, kinesin light ch 1.0 1 1 194.8 33.3 289 59-347 21-310 (311)
2 4a1s_A PINS, partner of inscut 1.0 1 1 193.3 33.7 276 64-349 85-377 (411)
3 3edt_B KLC 2, kinesin light ch 1.0 1 1 193.2 25.0 272 74-345 10-282 (283)
4 3ulq_A Response regulator aspa 1.0 1 1 192.9 33.4 270 65-351 103-375 (383)
5 3q15_A PSP28, response regulat 1.0 1 1 191.5 25.5 269 64-350 100-371 (378)
6 3sf4_A G-protein-signaling mod 1.0 1 1 187.8 32.0 276 64-349 46-341 (406)
7 4a1s_A PINS, partner of inscut 1.0 1 1 186.6 30.4 277 61-349 44-337 (411)
8 3sf4_A G-protein-signaling mod 1.0 1 1 181.3 30.1 274 64-349 8-301 (406)
9 3ro2_A PINS homolog, G-protein 1.0 1 1 179.6 32.2 276 64-349 42-337 (338)
10 3ro2_A PINS homolog, G-protein 1.0 1 1 173.8 31.1 274 64-349 4-297 (338)
No 1
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=194.77 Aligned_cols=289 Identities=21% Similarity=0.216 Sum_probs=234.4
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 08909999999999999992998999999999999999941999701899999999999993999999999999999999
Q 001523 59 ACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINE 138 (1060)
Q Consensus 59 ~~~s~dAraLlelA~~yl~qGdyeEAiellekALel~ek~lg~d~p~~A~Al~~LA~iy~~lGdyeeAle~lqKALel~e 138 (1060)
......+..++.+|..++..|++++|+.+|++++++.....+.+.+..+.++..+|.+|...|++++|+.++++++.+..
T Consensus 21 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 100 (311)
T 3nf1_A 21 YEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIRE 100 (311)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 74068999999999999985899999999999999999870899889999999999999978899999999999999999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 84199994489999999999999399799999999999999972799983399999999999999899799999999999
Q 001523 139 RELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKAL 218 (1060)
Q Consensus 139 k~lg~d~p~~a~al~nLA~lY~~lGdyeeAleylekALei~ek~~g~d~p~~a~al~nLA~iy~~lGkyeEAle~lekAL 218 (1060)
+..+.+.+....++.++|.+|..+|++++|+.++++++.+.....+.+++....++.++|.++..+|++++|+.+|++++
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 180 (311)
T 3nf1_A 101 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL 180 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 98088975999999999999998186999999999999999986589981899999999999998489799999999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998883199948899999999999996389159999999999999997-0999999999999999999997999999993
Q 001523 219 KCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAK-LGPDDLRTQDAAAWLEYFESKAFEQQEAARN 297 (1060)
Q Consensus 219 ei~ee~lG~dhp~~a~al~nLA~iy~~lGdyeEAie~lkkALei~kkl-lg~dh~~t~~al~~La~l~~k~~e~AeAl~~ 297 (1060)
.+.....+.+++....++..+|.+|..+|++++|+.++++++++.... ++............+..+.........+...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (311)
T 3nf1_A 181 EIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSF 260 (311)
T ss_dssp HHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCS
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 99998818897889999999999999848989999999999999998557889932189999999999732755568888
Q ss_pred CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 37999424441299729999999999999879979999999999988511
Q 001523 298 GTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGN 347 (1060)
Q Consensus 298 ~~~~ld~~~a~~~~~svaelL~~LA~iy~~qGkyeEAl~~ykkALkL~~k 347 (1060)
.............++....++..+|.+|..+|++++|+.+|++++++.++
T Consensus 261 ~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 261 GEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp CCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 88888775037798039999999999999877999999999999998646
No 2
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=193.28 Aligned_cols=276 Identities=13% Similarity=0.085 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999299899999999999999994199970189999999999999399999999999999999984199
Q 001523 64 DGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL 143 (1060)
Q Consensus 64 dAraLlelA~~yl~qGdyeEAiellekALel~ek~lg~d~p~~A~Al~~LA~iy~~lGdyeeAle~lqKALel~ek~lg~ 143 (1060)
.+..++.+|.+++..|++++|+.+|++++++.... .+.+..+.++..+|.+|..+|++++|+.++++++.+.... .
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~ 160 (411)
T 4a1s_A 85 LSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM--NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--G 160 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--T
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--H
T ss_conf 99999999999998789999999999999999871--5736799999999999998789999999999999999871--0
Q ss_pred CCHHHHHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 994489999999999999399-----------------799999999999999972799983399999999999999899
Q 001523 144 DHPDTMKSYGDLAVFYYRLQH-----------------TELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGN 206 (1060)
Q Consensus 144 d~p~~a~al~nLA~lY~~lGd-----------------yeeAleylekALei~ek~~g~d~p~~a~al~nLA~iy~~lGk 206 (1060)
+.+....++.++|.+|..+|+ +++|+.++++++.+..... +.+....++.++|.+|..+|+
T Consensus 161 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~g~ 238 (411)
T 4a1s_A 161 DRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLG--DRGAQGRACGNLGNTYYLLGD 238 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCCC
T ss_conf 448899999999999998376111333100112106999999999999999999738--879999999999999998588
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 79999999999999888319994889999999999999638915999999999999999709999999999999999999
Q 001523 207 VHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFES 286 (1060)
Q Consensus 207 yeEAle~lekALei~ee~lG~dhp~~a~al~nLA~iy~~lGdyeEAie~lkkALei~kkllg~dh~~t~~al~~La~l~~ 286 (1060)
+++|+.+|++++.+.... .+......++.++|.+|..+|++++|+.++++++.+.... .+.......+..++.++.
T Consensus 239 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~ 314 (411)
T 4a1s_A 239 FQAAIEHHQERLRIAREF--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVEL--GEREVEAQSCYSLGNTYT 314 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHH
T ss_conf 299999999999999851--9967899999999999998768999999999999999876--987999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 979999999933799942444129972999999999999987997999999999998851102
Q 001523 287 KAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 349 (1060)
Q Consensus 287 k~~e~AeAl~~~~~~ld~~~a~~~~~svaelL~~LA~iy~~qGkyeEAl~~ykkALkL~~ki~ 349 (1060)
..++..++.......+..............++..+|.+|..+|++++|+.+|++++++...+.
T Consensus 315 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 377 (411)
T 4a1s_A 315 LLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAXXXX 377 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 818899999999999999998798588999999999999980569999999999999985100
No 3
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=1.00 E-value=1 Score=193.23 Aligned_cols=272 Identities=21% Similarity=0.212 Sum_probs=219.5
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 99992998999999999999999941999701899999999999993999999999999999999841999944899999
Q 001523 74 TALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYG 153 (1060)
Q Consensus 74 ~yl~qGdyeEAiellekALel~ek~lg~d~p~~A~Al~~LA~iy~~lGdyeeAle~lqKALel~ek~lg~d~p~~a~al~ 153 (1060)
.....|++++|+.+|+++++++.+..+.+++..+.++..+|.+|..+|++++|+.++++++.+.++..+.+++....++.
T Consensus 10 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 10 HSSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp ---CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 24788977899999999999999863999878999999999999986669999999999999999873876669999998
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 99999999399799999999999999972799983399999999999999899799999999999998883199948899
Q 001523 154 DLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTA 233 (1060)
Q Consensus 154 nLA~lY~~lGdyeeAleylekALei~ek~~g~d~p~~a~al~nLA~iy~~lGkyeEAle~lekALei~ee~lG~dhp~~a 233 (1060)
++|.+|..+|++++|+.+|++++.+..+..+.+++....++.++|.+|..+|++++|+.+|++++.+.....+.+++...
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 169 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVA 169 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 89999998104999999999999999987199986999999999999998577999999999999999986499987999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
Q ss_conf 9999999999963891599999999999999970-999999999999999999997999999993379994244412997
Q 001523 234 ASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKL-GPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHL 312 (1060)
Q Consensus 234 ~al~nLA~iy~~lGdyeEAie~lkkALei~kkll-g~dh~~t~~al~~La~l~~k~~e~AeAl~~~~~~ld~~~a~~~~~ 312 (1060)
.++.++|.++..+|++++|+.++++++++..... +..+.........+..+.........+................++
T Consensus 170 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (283)
T 3edt_B 170 KTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSP 249 (283)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 99999999999849978899999999999887538885436888999999998649963689889989999985687878
Q ss_pred CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 299999999999998799799999999999885
Q 001523 313 SVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVK 345 (1060)
Q Consensus 313 svaelL~~LA~iy~~qGkyeEAl~~ykkALkL~ 345 (1060)
....++..+|.+|..+|++++|+.+|++++++.
T Consensus 250 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 250 TVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 999999999999998688999999999998740
No 4
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=1.00 E-value=1 Score=192.87 Aligned_cols=270 Identities=11% Similarity=0.012 Sum_probs=217.6
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999992998999999999999999941999701899999999999993999999999999999999841999
Q 001523 65 GRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLD 144 (1060)
Q Consensus 65 AraLlelA~~yl~qGdyeEAiellekALel~ek~lg~d~p~~A~Al~~LA~iy~~lGdyeeAle~lqKALel~ek~lg~d 144 (1060)
...++.+|..++..|++++|+.+|++|+.+.... .+.+..+.++..+|.+|..+|++++|+.++++|++++... +..
T Consensus 103 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~ 179 (383)
T 3ulq_A 103 YYFNFFRGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAY 179 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STT
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC-CCC
T ss_conf 9999999999998669999999999999998609--9899999999999999998088799999999999999867-664
Q ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 94489999999999999399799999999999999972799983399999999999999899799999999999998883
Q 001523 145 HPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRL 224 (1060)
Q Consensus 145 ~p~~a~al~nLA~lY~~lGdyeeAleylekALei~ek~~g~d~p~~a~al~nLA~iy~~lGkyeEAle~lekALei~ee~ 224 (1060)
.+..+.++.++|.+|..+|++++|+.+|++++.+..... +....+.++.++|.+|..+|++++|+.+|++++.+.+..
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~ 257 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK--QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEES 257 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 377998999999999985489999999999999998749--827899999999999987799999999999999989861
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHCCCC
Q ss_conf 199948899999999999996389159999999999999997099999999999999999999799---99999933799
Q 001523 225 LGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFE---QQEAARNGTRK 301 (1060)
Q Consensus 225 lG~dhp~~a~al~nLA~iy~~lGdyeEAie~lkkALei~kkllg~dh~~t~~al~~La~l~~k~~e---~AeAl~~~~~~ 301 (1060)
.+.+....++.++|.++..+|++++|..++++++.+...... +........++.+....++ ..+++....
T Consensus 258 --~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~-- 330 (383)
T 3ulq_A 258 --NILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGD---VIYLSEFEFLKSLYLSGPDEEAIQGFFDFLE-- 330 (383)
T ss_dssp --TCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHH--
T ss_pred --CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--
T ss_conf --655139999999999998879979999999999999988599---9999999999998838874999999999999--
Q ss_pred CCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 94244412997299999999999998799799999999999885110279
Q 001523 302 PDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFYQD 351 (1060)
Q Consensus 302 ld~~~a~~~~~svaelL~~LA~iy~~qGkyeEAl~~ykkALkL~~ki~~~ 351 (1060)
..........++..+|.+|..+|++++|+.+|++++++..++...
T Consensus 331 -----~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~i~~~ 375 (383)
T 3ulq_A 331 -----SKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGG 375 (383)
T ss_dssp -----HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTSCSSC
T ss_pred -----HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf -----776877999999999999997889999999999999999871145
No 5
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=1.00 E-value=1 Score=191.54 Aligned_cols=269 Identities=15% Similarity=0.048 Sum_probs=214.0
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999299899999999999999994199970189999999999999399999999999999999984199
Q 001523 64 DGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL 143 (1060)
Q Consensus 64 dAraLlelA~~yl~qGdyeEAiellekALel~ek~lg~d~p~~A~Al~~LA~iy~~lGdyeeAle~lqKALel~ek~lg~ 143 (1060)
....++.+|..++..|++++|+.+|++|+.+.... .+.+..+.++..+|.+|..+|+++.|+.++++|++++.....
T Consensus 100 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~- 176 (378)
T 3q15_A 100 KYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV--SDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPL- 176 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTT-
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC-
T ss_conf 99999999999999778999999999999998658--891899999999999999819909999999999999986788-
Q ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99448999999999999939979999999999999997279998339999999999999989979999999999999888
Q 001523 144 DHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQR 223 (1060)
Q Consensus 144 d~p~~a~al~nLA~lY~~lGdyeeAleylekALei~ek~~g~d~p~~a~al~nLA~iy~~lGkyeEAle~lekALei~ee 223 (1060)
.....+.++.++|.+|..+|++++|+++|++++.+..... +....+.++.+||.+|..+|++++|+.+|++++.+.+.
T Consensus 177 ~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 254 (378)
T 3q15_A 177 YSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ--NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSRE 254 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 3066999999999999985789999999999999999869--87789999998999998789999999999999998876
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHCCC
Q ss_conf 3199948899999999999996389159999999999999997099999999999999999999799---9999993379
Q 001523 224 LLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFE---QQEAARNGTR 300 (1060)
Q Consensus 224 ~lG~dhp~~a~al~nLA~iy~~lGdyeEAie~lkkALei~kkllg~dh~~t~~al~~La~l~~k~~e---~AeAl~~~~~ 300 (1060)
. .++....++.++|.++..+|++++|..++++++.+......+.... ....+..+.....+ ..+++....
T Consensus 255 ~---~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~l~~ly~~~~~~~~~~~al~~~~- 327 (378)
T 3q15_A 255 K---VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKE---LFLFLQAVYKETVDERKIHDLLSYFE- 327 (378)
T ss_dssp H---CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHH---HHHHHHHHHSSSCCHHHHHHHHHHHH-
T ss_pred H---CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHCCCCHHHHHHHHHHHH-
T ss_conf 0---8856999999999999988998999999999999998838988999---99999998708883999999999998-
Q ss_pred CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99424441299729999999999999879979999999999988511027
Q 001523 301 KPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFYQ 350 (1060)
Q Consensus 301 ~ld~~~a~~~~~svaelL~~LA~iy~~qGkyeEAl~~ykkALkL~~ki~~ 350 (1060)
.........+++..+|.+|..+|++++|+.+|++++++..++..
T Consensus 328 ------~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~~~~ 371 (378)
T 3q15_A 328 ------KKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILK 371 (378)
T ss_dssp ------HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ------HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf ------67883689999999999999879999999999999999999855
No 6
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=187.78 Aligned_cols=276 Identities=13% Similarity=0.088 Sum_probs=229.7
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999299899999999999999994199970189999999999999399999999999999999984199
Q 001523 64 DGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL 143 (1060)
Q Consensus 64 dAraLlelA~~yl~qGdyeEAiellekALel~ek~lg~d~p~~A~Al~~LA~iy~~lGdyeeAle~lqKALel~ek~lg~ 143 (1060)
.+..++.+|.+++..|++++|+.++++++.+.... .+.+..+.++..+|.+|..+|++++|+.++++++.+.... .
T Consensus 46 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~ 121 (406)
T 3sf4_A 46 LSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--N 121 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--T
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--C
T ss_conf 99999999999998068999999999999999862--6667899999999999988479999999999999999865--3
Q ss_pred CCHHHHHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 994489999999999999399--------------------799999999999999972799983399999999999999
Q 001523 144 DHPDTMKSYGDLAVFYYRLQH--------------------TELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEG 203 (1060)
Q Consensus 144 d~p~~a~al~nLA~lY~~lGd--------------------yeeAleylekALei~ek~~g~d~p~~a~al~nLA~iy~~ 203 (1060)
+......++.++|.+|..+|+ +++|+.++++++.+..... +.+..+.++.++|.+|..
T Consensus 122 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~ 199 (406)
T 3sf4_A 122 DKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALG--DRAAQGRAFGNLGNTHYL 199 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHH
T ss_conf 210068999999999997397444443100001046678999999999999999998556--747789999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 89979999999999999888319994889999999999999638915999999999999999709999999999999999
Q 001523 204 LGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEY 283 (1060)
Q Consensus 204 lGkyeEAle~lekALei~ee~lG~dhp~~a~al~nLA~iy~~lGdyeEAie~lkkALei~kkllg~dh~~t~~al~~La~ 283 (1060)
+|++++|+.++++++.+.... .+....+.++.++|.+|..+|++++|+.++++++.+.... .+.......+..++.
T Consensus 200 ~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~ 275 (406)
T 3sf4_A 200 LGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGN 275 (406)
T ss_dssp HTBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHH
T ss_conf 368999999999999999862--7858999999999999988499699999999999998857--676489999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999979999999933799942444129972999999999999987997999999999998851102
Q 001523 284 FESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 349 (1060)
Q Consensus 284 l~~k~~e~AeAl~~~~~~ld~~~a~~~~~svaelL~~LA~iy~~qGkyeEAl~~ykkALkL~~ki~ 349 (1060)
++...++..+|...............+......++..+|.+|..+|++++|+.+|++++++.....
T Consensus 276 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 341 (406)
T 3sf4_A 276 TYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVG 341 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 999837699999999999999985578578999999999999986999999999999999999822
No 7
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=186.56 Aligned_cols=277 Identities=16% Similarity=0.129 Sum_probs=226.5
Q ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 90999999999999999299899999999999999994199970189999999999999399999999999999999984
Q 001523 61 SSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERE 140 (1060)
Q Consensus 61 ~s~dAraLlelA~~yl~qGdyeEAiellekALel~ek~lg~d~p~~A~Al~~LA~iy~~lGdyeeAle~lqKALel~ek~ 140 (1060)
....+..++.+|..++..|++++|+.+|++++++. ..+....+.++..+|.+|..+|++++|+.++++++.+.+..
T Consensus 44 ~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 119 (411)
T 4a1s_A 44 GSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAG----TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM 119 (411)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
T ss_conf 06899999999999988275999999999998746----45846899999999999998789999999999999999871
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC--------------
Q ss_conf 199994489999999999999399799999999999999972799983399999999999999899--------------
Q 001523 141 LGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGN-------------- 206 (1060)
Q Consensus 141 lg~d~p~~a~al~nLA~lY~~lGdyeeAleylekALei~ek~~g~d~p~~a~al~nLA~iy~~lGk-------------- 206 (1060)
.+.+....++..+|.+|..+|++++|+.+|++++.+..... +.+....++.++|.+|..+|+
T Consensus 120 --~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a 195 (411)
T 4a1s_A 120 --NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLG--DRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDV 195 (411)
T ss_dssp --TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf --57367999999999999987899999999999999998710--44889999999999999837611133310011210
Q ss_pred ---HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf ---79999999999999888319994889999999999999638915999999999999999709999999999999999
Q 001523 207 ---VHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEY 283 (1060)
Q Consensus 207 ---yeEAle~lekALei~ee~lG~dhp~~a~al~nLA~iy~~lGdyeEAie~lkkALei~kkllg~dh~~t~~al~~La~ 283 (1060)
+++|+.++++++.+.... .+.+....++.++|.+|..+|++++|+.++++++++.... .+.......+..++.
T Consensus 196 ~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~ 271 (411)
T 4a1s_A 196 KEALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREF--GDRAAERRANSNLGN 271 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHH
T ss_conf 699999999999999999973--8879999999999999998588299999999999999851--996789999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999979999999933799942444129972999999999999987997999999999998851102
Q 001523 284 FESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 349 (1060)
Q Consensus 284 l~~k~~e~AeAl~~~~~~ld~~~a~~~~~svaelL~~LA~iy~~qGkyeEAl~~ykkALkL~~ki~ 349 (1060)
++...++..++.......+..............++..+|.+|..+|++++|+.+|++++.+.....
T Consensus 272 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 337 (411)
T 4a1s_A 272 SHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELG 337 (411)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 999876899999999999999987698799999999999999981889999999999999999879
No 8
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=181.32 Aligned_cols=274 Identities=13% Similarity=0.075 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999299899999999999999994199970189999999999999399999999999999999984199
Q 001523 64 DGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL 143 (1060)
Q Consensus 64 dAraLlelA~~yl~qGdyeEAiellekALel~ek~lg~d~p~~A~Al~~LA~iy~~lGdyeeAle~lqKALel~ek~lg~ 143 (1060)
.+..++.+|..++..|++++|+.+|++++++. ..+....+.++..+|.+|...|++++|+.++++++.+.... .
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~ 81 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVG----TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--G 81 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--T
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC----CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--C
T ss_conf 99999988999987036899999999998638----63599999999999999998068999999999999999862--6
Q ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC-----------------
Q ss_conf 994489999999999999399799999999999999972799983399999999999999899-----------------
Q 001523 144 DHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGN----------------- 206 (1060)
Q Consensus 144 d~p~~a~al~nLA~lY~~lGdyeeAleylekALei~ek~~g~d~p~~a~al~nLA~iy~~lGk----------------- 206 (1060)
+.+....++..+|.+|..+|++++|+.++++++.+..... +....+.++.++|.+|..+|+
T Consensus 82 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 82 DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 6678999999999999884799999999999999998653--21006899999999999739744444310000104667
Q ss_pred ---HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf ---79999999999999888319994889999999999999638915999999999999999709999999999999999
Q 001523 207 ---VHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEY 283 (1060)
Q Consensus 207 ---yeEAle~lekALei~ee~lG~dhp~~a~al~nLA~iy~~lGdyeEAie~lkkALei~kkllg~dh~~t~~al~~La~ 283 (1060)
+++|+.++++++.+.... .+.+....++.++|.++..+|++++|+.++++++.+.... .+.......+..++.
T Consensus 160 ~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~ 235 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGN 235 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHH
T ss_conf 899999999999999999855--6747789999999999998368999999999999999862--785899999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999979999999933799942444129972999999999999987997999999999998851102
Q 001523 284 FESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 349 (1060)
Q Consensus 284 l~~k~~e~AeAl~~~~~~ld~~~a~~~~~svaelL~~LA~iy~~qGkyeEAl~~ykkALkL~~ki~ 349 (1060)
++...++..++......................++..+|.+|..+|++++|+.+|++++++.....
T Consensus 236 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 301 (406)
T 3sf4_A 236 AYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELN 301 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 998849969999999999999885767648999999999999983769999999999999998557
No 9
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=1.00 E-value=1 Score=179.59 Aligned_cols=276 Identities=13% Similarity=0.084 Sum_probs=225.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999299899999999999999994199970189999999999999399999999999999999984199
Q 001523 64 DGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL 143 (1060)
Q Consensus 64 dAraLlelA~~yl~qGdyeEAiellekALel~ek~lg~d~p~~A~Al~~LA~iy~~lGdyeeAle~lqKALel~ek~lg~ 143 (1060)
.+..++.+|.++...|++++|+.++++++.+.... .+.+..+.++..+|.+|..+|++++|+.++++++.+.... .
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~ 117 (338)
T 3ro2_A 42 LSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--N 117 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--T
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--C
T ss_conf 99999999999999488899999999999986366--5527899999999999998569999999999999999873--6
Q ss_pred CCHHHHHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 994489999999999999399--------------------799999999999999972799983399999999999999
Q 001523 144 DHPDTMKSYGDLAVFYYRLQH--------------------TELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEG 203 (1060)
Q Consensus 144 d~p~~a~al~nLA~lY~~lGd--------------------yeeAleylekALei~ek~~g~d~p~~a~al~nLA~iy~~ 203 (1060)
+......++.++|.+|..+|+ +++|+.++++++.+..... +.+....++.++|.++..
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~~~~ 195 (338)
T 3ro2_A 118 DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALG--DRAAQGRAFGNLGNTHYL 195 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHH
T ss_conf 865789999999999998076411101455421005689999999999999999987469--789999999789999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 89979999999999999888319994889999999999999638915999999999999999709999999999999999
Q 001523 204 LGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEY 283 (1060)
Q Consensus 204 lGkyeEAle~lekALei~ee~lG~dhp~~a~al~nLA~iy~~lGdyeEAie~lkkALei~kkllg~dh~~t~~al~~La~ 283 (1060)
+|++++|+.++++++.+.... .+......++..+|.++..+|++++|+.++++++.+.... .+..........++.
T Consensus 196 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~ 271 (338)
T 3ro2_A 196 LGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGN 271 (338)
T ss_dssp HTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHH
T ss_conf 178999999999999999855--9859999999999999998188999999999999999850--356589999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999979999999933799942444129972999999999999987997999999999998851102
Q 001523 284 FESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 349 (1060)
Q Consensus 284 l~~k~~e~AeAl~~~~~~ld~~~a~~~~~svaelL~~LA~iy~~qGkyeEAl~~ykkALkL~~ki~ 349 (1060)
+....++..++.......+..............++..++.+|..+|++++|+.+|++++++.++..
T Consensus 272 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 337 (338)
T 3ro2_A 272 TYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVG 337 (338)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC-----
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 999865899999999999999872389579999999999999986885899999999999987635
No 10
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=1.00 E-value=1 Score=173.85 Aligned_cols=274 Identities=13% Similarity=0.068 Sum_probs=220.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999299899999999999999994199970189999999999999399999999999999999984199
Q 001523 64 DGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL 143 (1060)
Q Consensus 64 dAraLlelA~~yl~qGdyeEAiellekALel~ek~lg~d~p~~A~Al~~LA~iy~~lGdyeeAle~lqKALel~ek~lg~ 143 (1060)
.+..++..|..++..|++++|+.+|+++++.. ..+....+.++..+|.+|...|++++|+.++++++.+.... .
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~ 77 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVG----TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--G 77 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--T
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC--C
T ss_conf 79999999999987116899999999998507----15188899999999999999488899999999999986366--5
Q ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC-----------------
Q ss_conf 994489999999999999399799999999999999972799983399999999999999899-----------------
Q 001523 144 DHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGN----------------- 206 (1060)
Q Consensus 144 d~p~~a~al~nLA~lY~~lGdyeeAleylekALei~ek~~g~d~p~~a~al~nLA~iy~~lGk----------------- 206 (1060)
+.+....++..+|.+|..+|++++|+.++++++.+..... +......++.++|.+|..+|+
T Consensus 78 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 78 DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 5278999999999999985699999999999999998736--86578999999999999807641110145542100568
Q ss_pred ---HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf ---79999999999999888319994889999999999999638915999999999999999709999999999999999
Q 001523 207 ---VHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEY 283 (1060)
Q Consensus 207 ---yeEAle~lekALei~ee~lG~dhp~~a~al~nLA~iy~~lGdyeEAie~lkkALei~kkllg~dh~~t~~al~~La~ 283 (1060)
+++|+.++++++.+.... .+.+....++..+|.++..+|++++|+.++++++.+.... .+..........++.
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~ 231 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGN 231 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHH
T ss_conf 999999999999999998746--9789999999789999998178999999999999999855--985999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999979999999933799942444129972999999999999987997999999999998851102
Q 001523 284 FESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 349 (1060)
Q Consensus 284 l~~k~~e~AeAl~~~~~~ld~~~a~~~~~svaelL~~LA~iy~~qGkyeEAl~~ykkALkL~~ki~ 349 (1060)
+....++..++......................++..+|.+|..+|++++|+.+|++++++.....
T Consensus 232 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 297 (338)
T 3ro2_A 232 AYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK 297 (338)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 999818899999999999999985035658999999999999986589999999999999987238
Done!